Psyllid ID: psy8006

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120------
Protein Sequence
MNNIKNIISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLLELLTSAVDSKIRESFGSKSESGVQNCLEPSISVFSSLSKFET
Secondary Structure (PSIPRED)
cccEEEccccccccccccEEEEEEEEcccccEEEEEEEcccccccHHHHHHHHHHHHHHHHcccccEEEEEEEEEEcccEEEEEEEccccccHHHHHHcccccHHHHHHHHHHHHHHHHHHccccc
Secondary Structure Prediction (SSPRO)
cccHHHHccccccccccEEEEEEEEEcccHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHccccEEEEEEEEcccccEEEEEEEccccccHHHHHccccccHHHHHHHHHHHHHHHHHHHcccc
Coil and Loop (DISEMBL)
MNNIKNIISSIINDMgkyatvrrcrdrkngTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLLELLTSAVDSKiresfgsksesgvqnclepsisvfsslskfet
Flexible Loop (DISEMBL)
MNNIKNIISSiindmgkyatvrrcrdrkngtqyaakflrkkrrstdlKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLLELLTSAVDSKIRESfgsksesgvqnclepsisvfsslskfet
Low Complexity Region (SEG)
MnnikniissiinDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLLELLTSAVDSKIRESFGSKSESGVQNCLEPSISVFSSLSKFET
Disordered region (IsUnstruct)
*****NIISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLLELLTSAVD**********************************
Disordered Region (DISOPRED)
MNNIKNIISSIINDMGKYATVRRCRDRKNGTQYAAKFLRK*********EILHEVAVLEACRCNSRIVQLHQVFESSHDMILLLELLTSAVDSKIRESFGSKSESGVQNCLEPSISVFSSLSKF**
Disordered Region (DISEMBL)
MNNIKNIISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLLELLTSAVDSKIRE***********NCLEPSISVF********
Disordered Region (DISPRO)
*NNIKNIISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLLELLTSAVDSKIRESFGSKSESGVQNCLEPSISVFSSLSK***
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MNNIKNIISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLLELLTSAVDSKIRESFGSKSESGVQNCLEPSISVFSSLSKFET
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	126	2.2.26 [Sep-21-2011]
O94768	372	Serine/threonine-protein	yes	N/A	0.674	0.228	0.471	6e-17
Q91XS8	371	Serine/threonine-protein	yes	N/A	0.555	0.188	0.514	1e-16
Q9UEE5	414	Serine/threonine-protein	no	N/A	0.555	0.169	0.471	7e-16
Q9GM70	397	Serine/threonine-protein	no	N/A	0.555	0.176	0.485	2e-15
Q8BG48	372	Serine/threonine-protein	yes	N/A	0.555	0.188	0.5	3e-15
O44997	1425	Death-associated protein	yes	N/A	0.595	0.052	0.455	2e-13
Q0KHT7	784	Probable serine/threonine	yes	N/A	0.761	0.122	0.385	3e-12
Q80YE7	1442	Death-associated protein	no	N/A	0.587	0.051	0.367	5e-10
O43293	454	Death-associated protein	no	N/A	0.587	0.162	0.392	6e-10
P53355	1430	Death-associated protein	no	N/A	0.563	0.049	0.368	1e-09

>sp|O94768|ST17B_HUMAN Serine/threonine-protein kinase 17B OS=Homo sapiens GN=STK17B PE=1 SV=1

 Score = 85.9 bits (211), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 41/87 (47%), Positives = 61/87 (70%), Gaps = 2/87 (2%)

Query: 1   MNNIKN--IISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVL 58
           M N  N  I++S     GK+A VR+C  +  G +YAAKFL+K+RR  D +AEILHE+AVL
Sbjct: 25  MENFNNFYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVL 84

Query: 59  EACRCNSRIVQLHQVFESSHDMILLLE 85
           E  +   R++ LH+V+E++ ++IL+LE
Sbjct: 85  ELAKSCPRVINLHEVYENTSEIILILE 111

Acts as a positive regulator of apoptosis.
Homo sapiens (taxid: 9606)
EC: 2EC: .EC: 7EC: .EC: 1EC: 1EC: .EC: 1

>sp|Q91XS8|ST17B_RAT Serine/threonine-protein kinase 17B OS=Rattus norvegicus GN=Stk17b PE=1 SV=1

 Score = 84.7 bits (208), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 36/70 (51%), Positives = 53/70 (75%)

Query: 16  GKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFE 75
           GK+A VR+C  +  G +YAAKFL+K+RR  D +AEILHE+AVLE  R    ++ LH+V+E
Sbjct: 42  GKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELARSCPHVINLHEVYE 101

Query: 76  SSHDMILLLE 85
           ++ ++IL+LE
Sbjct: 102 TATEIILVLE 111

Acts as a positive regulator of apoptosis.

Rattus norvegicus (taxid: 10116)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q9UEE5|ST17A_HUMAN Serine/threonine-protein kinase 17A OS=Homo sapiens GN=STK17A PE=1 SV=2

 Score = 82.4 bits (202), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 33/70 (47%), Positives = 54/70 (77%)

Query: 16  GKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFE 75
           GK+A VR+C  + +G ++AAKF+RK+R+  D + EI+HE+AVLE  + N  ++ LH+V+E
Sbjct: 70  GKFAVVRKCIKKDSGKEFAAKFMRKRRKGQDCRMEIIHEIAVLELAQDNPWVINLHEVYE 129

Query: 76  SSHDMILLLE 85
           ++ +MIL+LE
Sbjct: 130 TASEMILVLE 139

Acts as a positive regulator of apoptosis. Also acts as a regulator of cellular reactive oxygen species.

Homo sapiens (taxid: 9606)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q9GM70|ST17A_RABIT Serine/threonine-protein kinase 17A OS=Oryctolagus cuniculus GN=STK17A PE=2 SV=1

 Score = 80.9 bits (198), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 34/70 (48%), Positives = 54/70 (77%)

Query: 16  GKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFE 75
           GK+A VR+C  + +G ++AAKF+RK+R+  D + EI+HE+AVLE  + N  ++ LH+V+E
Sbjct: 53  GKFAVVRKCIQKDSGKEFAAKFMRKRRKGQDCRMEIIHEIAVLELAQDNPWVINLHEVYE 112

Query: 76  SSHDMILLLE 85
           +S +MIL+LE
Sbjct: 113 TSSEMILVLE 122

Acts as a positive regulator of apoptosis. May also act as a regulator of cellular reactive oxygen species.

Oryctolagus cuniculus (taxid: 9986)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q8BG48|ST17B_MOUSE Serine/threonine-protein kinase 17B OS=Mus musculus GN=Stk17b PE=2 SV=1

 Score = 80.5 bits (197), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 35/70 (50%), Positives = 52/70 (74%)

Query: 16  GKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFE 75
           GK+A VR+C  +  G +YAAK L+K+RR  D +AEILHE+AVLE  R    ++ LH+V+E
Sbjct: 42  GKFAVVRQCISKSTGQEYAAKSLKKRRRGQDCRAEILHEIAVLELARSCPHVINLHEVYE 101

Query: 76  SSHDMILLLE 85
           ++ ++IL+LE
Sbjct: 102 NATEIILVLE 111

Acts as a positive regulator of apoptosis.

Mus musculus (taxid: 10090)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|O44997|DAPK_CAEEL Death-associated protein kinase dapk-1 OS=Caenorhabditis elegans GN=dapk-1 PE=2 SV=2

 Score = 74.7 bits (182), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 36/79 (45%), Positives = 55/79 (69%), Gaps = 4/79 (5%)

Query: 16  GKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKA----EILHEVAVLEACRCNSRIVQLH 71
           G++A VRR RDRK G +YAAKF++K+R +T  +      I  EV VL+  R NS +V+LH
Sbjct: 37  GQFAVVRRVRDRKTGEKYAAKFIKKRRYATSRRGVTRQNIEREVRVLQKIRGNSNVVELH 96

Query: 72  QVFESSHDMILLLELLTSA 90
            V+E++ D+I++LEL++  
Sbjct: 97  AVYETASDVIIVLELVSGG 115

Negative regulator of barrier repair and innate immune responses to wounding. Appears to act downstream from or in parallel to muscarinic signaling in the regulation of autophagy.

Caenorhabditis elegans (taxid: 6239)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q0KHT7|Y2666_DROME Probable serine/threonine-protein kinase CG32666 OS=Drosophila melanogaster GN=CG32666 PE=1 SV=1

 Score = 70.5 bits (171), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 37/96 (38%), Positives = 55/96 (57%)

Query: 16  GKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFE 75
           GK+A VRR   +  G+ +AAKFL+++RR+     EI HE+AVL  C     IV L+ V E
Sbjct: 46  GKFAAVRRAIHKNTGSHFAAKFLKRRRRAQSSDKEIKHEIAVLMLCEGEDNIVNLNAVHE 105

Query: 76  SSHDMILLLELLTSAVDSKIRESFGSKSESGVQNCL 111
           +  D  LLLEL T      I ++    +E+  ++C+
Sbjct: 106 TRSDTALLLELATGGELQTILDNEECLTEAQARHCM 141

Drosophila melanogaster (taxid: 7227)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q80YE7|DAPK1_MOUSE Death-associated protein kinase 1 OS=Mus musculus GN=Dapk1 PE=1 SV=3

 Score = 63.2 bits (152), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 29/79 (36%), Positives = 53/79 (67%), Gaps = 5/79 (6%)

Query: 16 GKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKA----EILHEVAVLEACRCNSRIVQLH 71
          G++A V++CR++  G QYAAKF++K+R  +  +     +I  EV++L+  R +  ++ LH
Sbjct: 22 GQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIR-HPNVITLH 80

Query: 72 QVFESSHDMILLLELLTSA 90
          +V+E+  D+IL+LEL+   
Sbjct: 81 EVYENKTDVILILELVAGG 99

Calcium/calmodulin-dependent serine/threonine kinase involved in multiple cellular signaling pathways that trigger cell survival, apoptosis, and autophagy. Regulates both type I apoptotic and type II autophagic cell deaths signal, depending on the cellular setting. The former is caspase-dependent, while the latter is caspase-independent and is characterized by the accumulation of autophagic vesicles. Phosphorylates PIN1 resulting in inhibition of its catalytic activity, nuclear localization, and cellular function. Phosphorylates TPM1, enhancing stress fiber formation in endothelial cells. Phosphorylates STX1A and significantly decreases its binding to STXBP1. Phosphorylates PRKD1 and regulates JNK signaling by binding and activating PRKD1 under oxidative stress. Phosphorylates BECN1, reducing its interaction with BCL2 and BCL2L1 and promoting the induction of autophagy. Phosphorylates TSC2, disrupting the TSC1-TSC2 complex and stimulating mTORC1 activity in a growth factor-dependent pathway. Phosphorylates RPS6, MYL9 and DAPK3 (By similarity). Acts as a signaling amplifier of NMDA receptors at extrasynaptic sites for mediating brain damage in stroke. Cerebral ischemia recruits DAPK1 into the NMDA receptor complex and it phosphorylates GRINB at Ser-1303 inducing injurious Ca(2+) influx through NMDA receptor channels, resulting in an irreversible neuronal death.

Mus musculus (taxid: 10090)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|O43293|DAPK3_HUMAN Death-associated protein kinase 3 OS=Homo sapiens GN=DAPK3 PE=1 SV=1

 Score = 62.8 bits (151), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 31/79 (39%), Positives = 51/79 (64%), Gaps = 5/79 (6%)

Query: 16 GKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKA----EILHEVAVLEACRCNSRIVQLH 71
          G++A VR+CR +  G +YAAKF++K+R S+  +     EI  EV +L   R +  I+ LH
Sbjct: 22 GQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIR-HPNIITLH 80

Query: 72 QVFESSHDMILLLELLTSA 90
           +FE+  D++L+LEL++  
Sbjct: 81 DIFENKTDVVLILELVSGG 99

Isoform 2 can phosphorylate myosin, PPP1R12A and MYL12B.

Homo sapiens (taxid: 9606)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|P53355|DAPK1_HUMAN Death-associated protein kinase 1 OS=Homo sapiens GN=DAPK1 PE=1 SV=6

 Score = 62.0 bits (149), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 28/76 (36%), Positives = 53/76 (69%), Gaps = 5/76 (6%)

Query: 16 GKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKA----EILHEVAVLEACRCNSRIVQLH 71
          G++A V++CR++  G QYAAKF++K+R  +  +     +I  EV++L+  + +  ++ LH
Sbjct: 22 GQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ-HPNVITLH 80

Query: 72 QVFESSHDMILLLELL 87
          +V+E+  D+IL+LEL+
Sbjct: 81 EVYENKTDVILILELV 96

Isoform 2 cannot induce apoptosis but can induce membrane blebbing.

Homo sapiens (taxid: 9606)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	126
193613274	751	PREDICTED: hypothetical protein LOC10016	0.563	0.094	0.760	1e-23
242005347	822	death associated protein kinase, putativ	0.595	0.091	0.68	1e-21
156550883	757	PREDICTED: hypothetical protein LOC10011	0.563	0.093	0.676	1e-20
328776502	623	PREDICTED: serine/threonine-protein kina	0.563	0.113	0.647	1e-19
380022600	620	PREDICTED: serine/threonine-protein kina	0.563	0.114	0.647	1e-19
332025699	161	Serine/threonine-protein kinase 17A [Acr	0.563	0.440	0.661	1e-19
340723644	618	PREDICTED: hypothetical protein LOC10064	0.563	0.114	0.633	2e-19
307204456	158	Serine/threonine-protein kinase 17A [Har	0.563	0.449	0.661	2e-19
350426316	618	PREDICTED: hypothetical protein LOC10074	0.563	0.114	0.633	3e-19
383857727	578	PREDICTED: serine/threonine-protein kina	0.563	0.122	0.661	4e-19

>gi|193613274|ref|XP_001942516.1| PREDICTED: hypothetical protein LOC100165267 [Acyrthosiphon pisum]

 Score =  114 bits (285), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 54/71 (76%), Positives = 63/71 (88%)

Query: 16  GKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFE 75
           GKYATVRRCRD++ G QYAAKFLRK+RR+ DL+ EILHEVAVLEAC  NSRIV L++VFE
Sbjct: 57  GKYATVRRCRDKQTGKQYAAKFLRKRRRNADLRPEILHEVAVLEACTYNSRIVNLYKVFE 116

Query: 76  SSHDMILLLEL 86
           +S +MILLLEL
Sbjct: 117 TSTEMILLLEL 127

Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|242005347|ref|XP_002423531.1| death associated protein kinase, putative [Pediculus humanus corporis] gi|212506645|gb|EEB10793.1| death associated protein kinase, putative [Pediculus humanus corporis]

 Score =  108 bits (269), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 51/75 (68%), Positives = 61/75 (81%)

Query: 16 GKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFE 75
          GKYATVRRCR RK G QYAAK+L+K+RRSTDL+ EILHEVAVL AC    RIV L QVFE
Sbjct: 23 GKYATVRRCRHRKTGVQYAAKYLKKRRRSTDLRYEILHEVAVLHACAQCPRIVNLIQVFE 82

Query: 76 SSHDMILLLELLTSA 90
          ++++MIL+LEL +  
Sbjct: 83 TTNEMILVLELASGG 97

Source: Pediculus humanus corporis

Species: Pediculus humanus

Genus: Pediculus

Family: Pediculidae

Order: Phthiraptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|156550883|ref|XP_001602292.1| PREDICTED: hypothetical protein LOC100118283 [Nasonia vitripennis]

 Score =  104 bits (259), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 48/71 (67%), Positives = 60/71 (84%)

Query: 16  GKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFE 75
           GKYATVRRCR+R +G Q+AAKFLRK+RR+ +LKAE LHEVAVL+A     R+V LHQVFE
Sbjct: 46  GKYATVRRCRERTSGRQWAAKFLRKRRRAQELKAEALHEVAVLDAAAHCPRLVSLHQVFE 105

Query: 76  SSHDMILLLEL 86
           +S +M+L+LEL
Sbjct: 106 TSTEMVLVLEL 116

Source: Nasonia vitripennis

Species: Nasonia vitripennis

Genus: Nasonia

Family: Pteromalidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|328776502|ref|XP_624284.2| PREDICTED: serine/threonine-protein kinase 17A-like [Apis mellifera]

 Score =  101 bits (252), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 46/71 (64%), Positives = 61/71 (85%)

Query: 16  GKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFE 75
           GKYATV+RCR+R +G Q+AAKFLRK+RR+ +L+AE LHEVAVL+A    SR+V LHQVFE
Sbjct: 46  GKYATVKRCRERSSGRQWAAKFLRKRRRAQELRAEALHEVAVLDAAANCSRLVSLHQVFE 105

Query: 76  SSHDMILLLEL 86
           ++ +M+L+LEL
Sbjct: 106 TNTEMVLVLEL 116

Source: Apis mellifera

Species: Apis mellifera

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|380022600|ref|XP_003695128.1| PREDICTED: serine/threonine-protein kinase 17A-like [Apis florea]

 Score =  101 bits (251), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 46/71 (64%), Positives = 61/71 (85%)

Query: 16  GKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFE 75
           GKYATV+RCR+R +G Q+AAKFLRK+RR+ +L+AE LHEVAVL+A    SR+V LHQVFE
Sbjct: 46  GKYATVKRCRERSSGRQWAAKFLRKRRRAQELRAEALHEVAVLDAAANCSRLVSLHQVFE 105

Query: 76  SSHDMILLLEL 86
           ++ +M+L+LEL
Sbjct: 106 TNTEMVLVLEL 116

Source: Apis florea

Species: Apis florea

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|332025699|gb|EGI65857.1| Serine/threonine-protein kinase 17A [Acromyrmex echinatior]

 Score =  101 bits (251), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 47/71 (66%), Positives = 61/71 (85%)

Query: 16 GKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFE 75
          GKYATVRRCR+R +G Q+AAKFLRK+RR+ +L+AE LHEVAVL+A    SR+V LHQVFE
Sbjct: 10 GKYATVRRCRERSSGRQWAAKFLRKRRRAQELRAEALHEVAVLDAAAHCSRLVSLHQVFE 69

Query: 76 SSHDMILLLEL 86
          ++ +M+L+LEL
Sbjct: 70 TNTEMVLVLEL 80

Source: Acromyrmex echinatior

Species: Acromyrmex echinatior

Genus: Acromyrmex

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|340723644|ref|XP_003400199.1| PREDICTED: hypothetical protein LOC100645807 [Bombus terrestris]

 Score =  100 bits (250), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 45/71 (63%), Positives = 60/71 (84%)

Query: 16  GKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFE 75
           GKYA VRRCR+R +G Q+AAKFLRK+RR+ +L+AE LHEVAVL+A    SR+V LH+VFE
Sbjct: 46  GKYAAVRRCRERSSGRQWAAKFLRKRRRAQELRAEALHEVAVLDAAASCSRLVSLHEVFE 105

Query: 76  SSHDMILLLEL 86
           ++ +M+L+LEL
Sbjct: 106 TNTEMVLVLEL 116

Source: Bombus terrestris

Species: Bombus terrestris

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307204456|gb|EFN83163.1| Serine/threonine-protein kinase 17A [Harpegnathos saltator]

 Score =  100 bits (249), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 47/71 (66%), Positives = 61/71 (85%)

Query: 16 GKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFE 75
          GKYATVRRCR+R +G Q+AAKFLRK+RR+ +L+AE LHEVAVL+A    SR+V LHQVFE
Sbjct: 15 GKYATVRRCRERSSGRQWAAKFLRKRRRAQELRAEALHEVAVLDAAAHCSRLVSLHQVFE 74

Query: 76 SSHDMILLLEL 86
          ++ +M+L+LEL
Sbjct: 75 TNTEMVLVLEL 85

Source: Harpegnathos saltator

Species: Harpegnathos saltator

Genus: Harpegnathos

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|350426316|ref|XP_003494401.1| PREDICTED: hypothetical protein LOC100745919 [Bombus impatiens]

 Score = 99.8 bits (247), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 45/71 (63%), Positives = 60/71 (84%)

Query: 16  GKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFE 75
           GKYA VRRCR+R +G Q+AAKFLRK+RR+ +L+AE LHEVAVL+A    SR+V LH+VFE
Sbjct: 46  GKYAAVRRCRERSSGRQWAAKFLRKRRRAQELRAEALHEVAVLDAAANCSRLVSLHEVFE 105

Query: 76  SSHDMILLLEL 86
           ++ +M+L+LEL
Sbjct: 106 TNTEMVLVLEL 116

Source: Bombus impatiens

Species: Bombus impatiens

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|383857727|ref|XP_003704355.1| PREDICTED: serine/threonine-protein kinase 17A-like [Megachile rotundata]

 Score = 99.4 bits (246), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 47/71 (66%), Positives = 61/71 (85%)

Query: 16  GKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFE 75
           GKYATVRRCR+R +G Q+AAKFLRK+RR+ +L+AE LHEVAVL+A    SR+V LHQVFE
Sbjct: 46  GKYATVRRCRERSSGRQWAAKFLRKRRRAQELRAEALHEVAVLDAAANCSRLVSLHQVFE 105

Query: 76  SSHDMILLLEL 86
           ++ +M+L+LEL
Sbjct: 106 TNTEMVLVLEL 116

Source: Megachile rotundata

Species: Megachile rotundata

Genus: Megachile

Family: Megachilidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	126
ZFIN|ZDB-GENE-061103-427	358	zgc:153952 "zgc:153952" [Danio	0.555	0.195	0.457	3.7e-16
UNIPROTKB|Q5ZM34	372	STK17B "Uncharacterized protei	0.555	0.188	0.542	3.9e-16
UNIPROTKB|O94768	372	STK17B "Serine/threonine-prote	0.555	0.188	0.514	5.1e-16
RGD|620457	371	Stk17b "serine/threonine kinas	0.555	0.188	0.514	1.4e-15
UNIPROTKB|Q91XS8	371	Stk17b "Serine/threonine-prote	0.555	0.188	0.514	1.4e-15
ZFIN|ZDB-GENE-040426-1499	354	stk17b "serine/threonine kinas	0.555	0.197	0.471	1.5e-15
UNIPROTKB|F1MSI1	372	STK17B "Uncharacterized protei	0.555	0.188	0.5	2.4e-15
UNIPROTKB|E2R573	372	STK17B "Uncharacterized protei	0.555	0.188	0.485	2.4e-15
UNIPROTKB|F1SN17	372	STK17B "Uncharacterized protei	0.555	0.188	0.5	2.4e-15
UNIPROTKB|Q9GM70	397	STK17A "Serine/threonine-prote	0.555	0.176	0.485	4.9e-15

ZFIN|ZDB-GENE-061103-427 zgc:153952 "zgc:153952" [Danio rerio (taxid:7955)]

 Score = 185 (70.2 bits), Expect = 3.7e-16, Sum P(2) = 3.7e-16
 Identities = 32/70 (45%), Positives = 54/70 (77%)

Query:    16 GKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFE 75
             GK+A V++C ++  G ++AAKFLRK+R+  D + +IL+E+AVLE+   N  +V LH+V+E
Sbjct:    34 GKFAVVKKCVEKTTGKEHAAKFLRKRRKGQDCRGDILNEIAVLESAEANPYVVGLHEVYE 93

Query:    76 SSHDMILLLE 85
             ++ ++IL+LE
Sbjct:    94 TTSEIILVLE 103

GO:0004672 "protein kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005575 "cellular_component" evidence=ND

UNIPROTKB|Q5ZM34 STK17B "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 205 (77.2 bits), Expect = 3.9e-16, P = 3.9e-16
 Identities = 38/70 (54%), Positives = 54/70 (77%)

Query:    16 GKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFE 75
             G+   VR+C  +  G +YAAKFL+K+RR  D KAEILHE+AVLE  + N RIV LH+V+E
Sbjct:    42 GRCGVVRKCIAKSTGQEYAAKFLKKRRRGQDCKAEILHEIAVLELTKSNPRIVNLHEVYE 101

Query:    76 SSHDMILLLE 85
             +++++IL+LE
Sbjct:   102 TANEIILVLE 111

GO:0004674 "protein serine/threonine kinase activity" evidence=ISS

GO:0005524 "ATP binding" evidence=ISS

GO:0006468 "protein phosphorylation" evidence=ISS

GO:0006917 "induction of apoptosis" evidence=ISS

GO:0007243 "intracellular protein kinase cascade" evidence=ISS

GO:0005634 "nucleus" evidence=ISS

UNIPROTKB|O94768 STK17B "Serine/threonine-protein kinase 17B" [Homo sapiens (taxid:9606)]

 Score = 204 (76.9 bits), Expect = 5.1e-16, P = 5.1e-16
 Identities = 36/70 (51%), Positives = 54/70 (77%)

Query:    16 GKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFE 75
             GK+A VR+C  +  G +YAAKFL+K+RR  D +AEILHE+AVLE  +   R++ LH+V+E
Sbjct:    42 GKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVINLHEVYE 101

Query:    76 SSHDMILLLE 85
             ++ ++IL+LE
Sbjct:   102 NTSEIILILE 111

GO:0006915 "apoptotic process" evidence=IEA

GO:0015629 "actin cytoskeleton" evidence=IEA

GO:0005793 "endoplasmic reticulum-Golgi intermediate compartment" evidence=IEA

GO:0005886 "plasma membrane" evidence=IEA

GO:0006917 "induction of apoptosis" evidence=IMP

GO:0005634 "nucleus" evidence=IDA

GO:0004674 "protein serine/threonine kinase activity" evidence=IDA

GO:0005524 "ATP binding" evidence=IDA

GO:0006468 "protein phosphorylation" evidence=IDA

GO:0007243 "intracellular protein kinase cascade" evidence=IDA

GO:0046777 "protein autophosphorylation" evidence=ISS

GO:0004672 "protein kinase activity" evidence=ISS

RGD|620457 Stk17b "serine/threonine kinase 17b" [Rattus norvegicus (taxid:10116)]

 Score = 200 (75.5 bits), Expect = 1.4e-15, P = 1.4e-15
 Identities = 36/70 (51%), Positives = 53/70 (75%)

Query:    16 GKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFE 75
             GK+A VR+C  +  G +YAAKFL+K+RR  D +AEILHE+AVLE  R    ++ LH+V+E
Sbjct:    42 GKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELARSCPHVINLHEVYE 101

Query:    76 SSHDMILLLE 85
             ++ ++IL+LE
Sbjct:   102 TATEIILVLE 111

GO:0004672 "protein kinase activity" evidence=IDA

GO:0004674 "protein serine/threonine kinase activity" evidence=ISO;ISS;IDA;TAS

GO:0005515 "protein binding" evidence=IPI

GO:0005524 "ATP binding" evidence=ISO;ISS;IDA

GO:0005634 "nucleus" evidence=ISO;ISS;IDA

GO:0005793 "endoplasmic reticulum-Golgi intermediate compartment" evidence=IEA

GO:0005886 "plasma membrane" evidence=IEA

GO:0006468 "protein phosphorylation" evidence=ISO;ISS;IDA

GO:0006915 "apoptotic process" evidence=IEA

GO:0006917 "induction of apoptosis" evidence=ISO;ISS;IMP

GO:0007243 "intracellular protein kinase cascade" evidence=ISO;ISS;IDA

GO:0012501 "programmed cell death" evidence=IDA

GO:0015629 "actin cytoskeleton" evidence=IMP

GO:0046777 "protein autophosphorylation" evidence=IDA

UNIPROTKB|Q91XS8 Stk17b "Serine/threonine-protein kinase 17B" [Rattus norvegicus (taxid:10116)]

 Score = 200 (75.5 bits), Expect = 1.4e-15, P = 1.4e-15
 Identities = 36/70 (51%), Positives = 53/70 (75%)

Query:    16 GKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFE 75
             GK+A VR+C  +  G +YAAKFL+K+RR  D +AEILHE+AVLE  R    ++ LH+V+E
Sbjct:    42 GKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELARSCPHVINLHEVYE 101

Query:    76 SSHDMILLLE 85
             ++ ++IL+LE
Sbjct:   102 TATEIILVLE 111

GO:0005515 "protein binding" evidence=IPI

ZFIN|ZDB-GENE-040426-1499 stk17b "serine/threonine kinase 17b (apoptosis-inducing)" [Danio rerio (taxid:7955)]

 Score = 199 (75.1 bits), Expect = 1.5e-15, P = 1.5e-15
 Identities = 33/70 (47%), Positives = 55/70 (78%)

Query:    16 GKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFE 75
             GK+A V+RC ++  G  +AAKF++K+RR  D +A+++HE+AVLEA + N R+V L+ V+E
Sbjct:    41 GKFAVVKRCVEKTTGKVFAAKFIKKRRRGRDCRADVIHEIAVLEAAKNNPRVVNLNAVYE 100

Query:    76 SSHDMILLLE 85
             + +D++L+LE
Sbjct:   101 TDYDLVLMLE 110

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0004672 "protein kinase activity" evidence=IEA

GO:0016310 "phosphorylation" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

GO:0016301 "kinase activity" evidence=IEA

UNIPROTKB|F1MSI1 STK17B "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 198 (74.8 bits), Expect = 2.4e-15, P = 2.4e-15
 Identities = 35/70 (50%), Positives = 53/70 (75%)

Query:    16 GKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFE 75
             GK+A VR+C  +  G +YAAKFL+K+RR  D +AEILHE+AVLE  +    ++ LH+V+E
Sbjct:    42 GKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELTKSCPHVINLHEVYE 101

Query:    76 SSHDMILLLE 85
             ++ ++IL+LE
Sbjct:   102 NTSEIILILE 111

GO:0006917 "induction of apoptosis" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

UNIPROTKB|E2R573 STK17B "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 198 (74.8 bits), Expect = 2.4e-15, P = 2.4e-15
 Identities = 34/70 (48%), Positives = 53/70 (75%)

Query:    16 GKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFE 75
             GK+A VR+C  +  G +YAAKFL+K+RR  D +AEILHE+A+LE  +    ++ LH+V+E
Sbjct:    42 GKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAILELAKSCPHVINLHEVYE 101

Query:    76 SSHDMILLLE 85
             ++ ++IL+LE
Sbjct:   102 NTSEIILILE 111

GO:0006917 "induction of apoptosis" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

UNIPROTKB|F1SN17 STK17B "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 198 (74.8 bits), Expect = 2.4e-15, P = 2.4e-15
 Identities = 35/70 (50%), Positives = 53/70 (75%)

Query:    16 GKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFE 75
             GK+A VR+C  +  G +YAAKFL+K+RR  D +AEILHE+AVLE  +    ++ LH+V+E
Sbjct:    42 GKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPHVINLHEVYE 101

Query:    76 SSHDMILLLE 85
             ++ ++IL+LE
Sbjct:   102 NASEIILVLE 111

GO:0006917 "induction of apoptosis" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

UNIPROTKB|Q9GM70 STK17A "Serine/threonine-protein kinase 17A" [Oryctolagus cuniculus (taxid:9986)]

 Score = 196 (74.1 bits), Expect = 4.9e-15, P = 4.9e-15
 Identities = 34/70 (48%), Positives = 54/70 (77%)

Query:    16 GKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFE 75
             GK+A VR+C  + +G ++AAKF+RK+R+  D + EI+HE+AVLE  + N  ++ LH+V+E
Sbjct:    53 GKFAVVRKCIQKDSGKEFAAKFMRKRRKGQDCRMEIIHEIAVLELAQDNPWVINLHEVYE 112

Query:    76 SSHDMILLLE 85
             +S +MIL+LE
Sbjct:   113 TSSEMILVLE 122

GO:0005524 "ATP binding" evidence=ISS

GO:0006917 "induction of apoptosis" evidence=IMP

GO:0007243 "intracellular protein kinase cascade" evidence=ISS;IDA

GO:0043065 "positive regulation of apoptotic process" evidence=ISS

GO:2000377 "regulation of reactive oxygen species metabolic process" evidence=ISS

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q91XS8	ST17B_RAT	2, ., 7, ., 1, 1, ., 1	0.5142	0.5555	0.1886	yes	N/A

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	126
smart00220	254	smart00220, S_TKc, Serine/Threonine protein kinase	2e-12
cd00180	215	cd00180, PKc, Catalytic domain of Protein Kinases	9e-09
pfam00069	260	pfam00069, Pkinase, Protein kinase domain	1e-08
cd05581	280	cd05581, STKc_PDK1, Catalytic domain of the Protei	1e-04
cd05123	250	cd05123, STKc_AGC, Catalytic domain of AGC family	1e-04
cd07833	288	cd07833, STKc_CDKL, Catalytic domain of Cyclin-Dep	3e-04
cd07832	286	cd07832, STKc_CCRK, Catalytic domain of the Serine	3e-04
COG0515	384	COG0515, SPS1, Serine/threonine protein kinase [Ge	4e-04
cd07831	282	cd07831, STKc_MOK, Catalytic domain of the Serine/	5e-04
cd05118	283	cd05118, STKc_CMGC, Catalytic domain of CMGC famil	6e-04
cd07845	309	cd07845, STKc_CDK10, Catalytic domain of the Serin	0.001
cd05583	288	cd05583, STKc_MSK_N, N-terminal catalytic domain o	0.001
cd05578	258	cd05578, STKc_Yank1, Catalytic domain of the Prote	0.002
cd05630	285	cd05630, STKc_GRK6, Catalytic domain of the Protei	0.003
cd05572	262	cd05572, STKc_cGK_PKG, Catalytic domain of the Pro	0.003
cd05608	280	cd05608, STKc_GRK1, Catalytic domain of the Protei	0.004

>gnl|CDD|214567 smart00220, S_TKc, Serine/Threonine protein kinases, catalytic domain

 Score = 61.4 bits (150), Expect = 2e-12
 Identities = 23/72 (31%), Positives = 38/72 (52%), Gaps = 2/72 (2%)

Query: 16 GKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFE 75
          G +  V   RD+K G   A K ++KK+   D +  IL E+ +L+  +    IV+L+ VFE
Sbjct: 10 GSFGKVYLARDKKTGKLVAIKVIKKKKIKKDRER-ILREIKILKKLKHP-NIVRLYDVFE 67

Query: 76 SSHDMILLLELL 87
              + L++E  
Sbjct: 68 DEDKLYLVMEYC 79

Phosphotransferases. Serine or threonine-specific kinase subfamily. Length = 254

>gnl|CDD|173623 cd00180, PKc, Catalytic domain of Protein Kinases

 Score = 51.1 bits (123), Expect = 9e-09
 Identities = 24/72 (33%), Positives = 43/72 (59%), Gaps = 2/72 (2%)

Query: 16 GKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFE 75
          G + TV   RD+K G + A K ++K+  S+ L+ E+L E+ +L+    +  IV+L+ VFE
Sbjct: 4  GGFGTVYLARDKKTGKKVAIKIIKKEDSSSLLE-ELLREIEILKKLN-HPNIVKLYGVFE 61

Query: 76 SSHDMILLLELL 87
            + + L++E  
Sbjct: 62 DENHLYLVMEYC 73

Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which one kinase activates a second kinase, which in turn, may act on other kinases; this sequential action transmits a signal from the cell surface to target proteins, which results in cellular responses. The PK family is one of the largest known protein families with more than 100 homologous yeast enzymes and 550 human proteins. A fraction of PK family members are pseudokinases that lack crucial residues for catalytic activity. The mutiplicity of kinases allows for specific regulation according to substrate, tissue distribution, and cellular localization. PKs regulate many cellular processes including proliferation, division, differentiation, motility, survival, metabolism, cell-cycle progression, cytoskeletal rearrangement, immunity, and neuronal functions. Many kinases are implicated in the development of various human diseases including different types of cancer. Length = 215

>gnl|CDD|215690 pfam00069, Pkinase, Protein kinase domain

 Score = 51.1 bits (123), Expect = 1e-08
 Identities = 17/72 (23%), Positives = 30/72 (41%), Gaps = 1/72 (1%)

Query: 16 GKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFE 75
          G + TV + + +  G   A K L+K+   +        E+ +L        IV+L   FE
Sbjct: 10 GSFGTVYKAKHKGTGKIVAVKILKKRSEKSKKDQTARREIRILRRLSH-PNIVRLIDAFE 68

Query: 76 SSHDMILLLELL 87
              + L++E  
Sbjct: 69 DKDHLYLVMEYC 80

Length = 260

>gnl|CDD|173672 cd05581, STKc_PDK1, Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1

 Score = 39.9 bits (94), Expect = 1e-04
 Identities = 18/75 (24%), Positives = 35/75 (46%), Gaps = 3/75 (4%)

Query: 16 GKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAE--ILHEVAVLEACRCNSRIVQLHQV 73
          G ++TV   ++++   +YA K L  KR+    K    +  E  VL     +  I++L+  
Sbjct: 12 GSFSTVVLAKEKETNKEYAIKIL-DKRQLIKEKKVKYVKIEKEVLTRLNGHPGIIKLYYT 70

Query: 74 FESSHDMILLLELLT 88
          F+   ++  +LE   
Sbjct: 71 FQDEENLYFVLEYAP 85

Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to autophosphorylate and is constitutively active in mammalian cells. PDK1 is essential for normal embryo development and is important in regulating cell volume. Length = 280

>gnl|CDD|173660 cd05123, STKc_AGC, Catalytic domain of AGC family Protein Serine/Threonine Kinases

 Score = 39.8 bits (94), Expect = 1e-04
 Identities = 21/73 (28%), Positives = 31/73 (42%), Gaps = 2/73 (2%)

Query: 16 GKYATVRRCRDRKNGTQYAAKFLRKKR-RSTDLKAEILHEVAVLEACRCNSRIVQLHQVF 74
          G +  V   R +  G  YA K L+KK+          L E  +L        IV+LH  F
Sbjct: 4  GSFGKVLLVRKKDTGKLYAMKVLKKKKIIKRKEVEHTLTERNILSRINH-PFIVKLHYAF 62

Query: 75 ESSHDMILLLELL 87
          ++   + L+LE  
Sbjct: 63 QTEEKLYLVLEYA 75

Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the turn motif. Phosphorylation at the A-loop is required of most AGC kinases, which results in a disorder-to-order transition of the A-loop. The ordered conformation results in the access of substrates and ATP to the active site. A subset of AGC kinases with C-terminal extensions containing the HM also requires phosphorylation at this site. Phosphorylation at the HM allows the C-terminal extension to form an ordered structure that packs into the hydrophobic pocket of the catalytic domain, which then reconfigures the kinase into an active bi-lobed state. In addition, growth factor-activated AGC kinases such as PKB, p70S6K, RSK, MSK, PKC, and SGK, require phosphorylation at the turn motif (also called tail or zipper site), located N-terminal to the HM at the C-terminal extension. AGC kinases regulate many cellular processes including division, growth, survival, metabolism, motility, and differentiation. Many are implicated in the development of various human diseases. Length = 250

>gnl|CDD|143338 cd07833, STKc_CDKL, Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases

 Score = 38.5 bits (90), Expect = 3e-04
 Identities = 22/70 (31%), Positives = 32/70 (45%), Gaps = 1/70 (1%)

Query: 16 GKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFE 75
          G Y  V +CR++  G   A K  ++     D+K   L EV VL   R +  IV L + F 
Sbjct: 12 GAYGVVLKCRNKATGEIVAIKKFKESEDDEDVKKTALREVKVLRQLR-HENIVNLKEAFR 70

Query: 76 SSHDMILLLE 85
              + L+ E
Sbjct: 71 RKGRLYLVFE 80

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning and memory. Length = 288

>gnl|CDD|173736 cd07832, STKc_CCRK, Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase

 Score = 38.4 bits (90), Expect = 3e-04
 Identities = 21/83 (25%), Positives = 42/83 (50%), Gaps = 1/83 (1%)

Query: 16 GKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFE 75
          G +  V + +DR+ G   A K +  +R    +  + L E+  L+AC+ +  +V+L  VF 
Sbjct: 11 GAHGIVFKAKDRETGETVALKKVALRRLEGGIPNQALREIKALQACQ-HPYVVKLLDVFP 69

Query: 76 SSHDMILLLELLTSAVDSKIRES 98
               +L++E + S +   +R+ 
Sbjct: 70 HGSGFVLVMEYMPSDLSEVLRDE 92

Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of heart failure. Length = 286

>gnl|CDD|223589 COG0515, SPS1, Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]

 Score = 38.2 bits (87), Expect = 4e-04
 Identities = 22/73 (30%), Positives = 34/73 (46%), Gaps = 4/73 (5%)

Query: 16 GKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAE-ILHEVAVLEACRCNSRIVQLHQVF 74
          G +  V   RDRK     A K L KK  S   + E  L E+ +L +      IV+L+  F
Sbjct: 11 GSFGEVYLARDRK---LVALKVLAKKLESKSKEVERFLREIQILASLNHPPNIVKLYDFF 67

Query: 75 ESSHDMILLLELL 87
          +    + L++E +
Sbjct: 68 QDEGSLYLVMEYV 80

Length = 384

>gnl|CDD|173735 cd07831, STKc_MOK, Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase

 Score = 38.0 bits (89), Expect = 5e-04
 Identities = 20/74 (27%), Positives = 38/74 (51%), Gaps = 3/74 (4%)

Query: 16 GKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQV-F 74
          G ++ V + + RK G  YA K ++K  +S + +   L E+  L     +  I++L +V F
Sbjct: 10 GTFSEVLKAQSRKTGKYYAIKCMKKHFKSLE-QVNNLREIQALRRLSPHPNILRLIEVLF 68

Query: 75 ESSHD-MILLLELL 87
          +     + L+ EL+
Sbjct: 69 DRKTGRLALVFELM 82

Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation. Length = 282

>gnl|CDD|143333 cd05118, STKc_CMGC, Catalytic domain of CMGC family Serine/Threonine Kinases

 Score = 37.7 bits (88), Expect = 6e-04
 Identities = 19/72 (26%), Positives = 34/72 (47%), Gaps = 1/72 (1%)

Query: 16 GKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFE 75
          G Y  V + RD+  G   A K ++ +  S  +    L E+ +L+    +  I++L  VF 
Sbjct: 10 GTYGVVYKARDKLTGEIVAIKKIKLRFESEGIPKTALREIKLLKELN-HPNIIKLLDVFR 68

Query: 76 SSHDMILLLELL 87
             D+ L+ E +
Sbjct: 69 HKGDLYLVFEFM 80

Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Length = 283

>gnl|CDD|173742 cd07845, STKc_CDK10, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10

 Score = 37.0 bits (86), Expect = 0.001
 Identities = 22/69 (31%), Positives = 30/69 (43%), Gaps = 2/69 (2%)

Query: 16 GKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFE 75
          G Y  V R RD  +G   A K +R       +    L E+ +L   R +  IV+L +V  
Sbjct: 18 GTYGIVYRARDTTSGEIVALKKVRMDNERDGIPISSLREITLLLNLR-HPNIVELKEVVV 76

Query: 76 SSH-DMILL 83
            H D I L
Sbjct: 77 GKHLDSIFL 85

Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing increases the transcription of c-RAF and the activation of the p42/p44 MAPK pathway, which leads to antiestrogen resistance. Patients who express low levels of CDK10 relapse early on tamoxifen. Length = 309

>gnl|CDD|173674 cd05583, STKc_MSK_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase

 Score = 36.7 bits (85), Expect = 0.001
 Identities = 25/72 (34%), Positives = 33/72 (45%), Gaps = 2/72 (2%)

Query: 16 GKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLK-AE-ILHEVAVLEACRCNSRIVQLHQV 73
          GK   VR+      G  YA K L+K       K AE    E  VLEA R    +V LH  
Sbjct: 14 GKVFLVRKVGGHDAGKLYAMKVLKKATIVQKAKTAEHTRTERQVLEAVRRCPFLVTLHYA 73

Query: 74 FESSHDMILLLE 85
          F++   + L+L+
Sbjct: 74 FQTDTKLHLILD 85

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines. This triggers phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydrophobic motif (HM) in the C-terminal extension of NTD, which facilitates the phosphorylation of the A-loop and activates the NTD, which in turn phosphorylates downstream targets. MSKs are predominantly nuclear proteins. They are widely expressed in many tissues including heart, brain, lung, liver, kidney, and pancreas. There are two isoforms of MSK, called MSK1 and MSK2. Length = 288

>gnl|CDD|173669 cd05578, STKc_Yank1, Catalytic domain of the Protein Serine/Threonine Kinase, Yank1

 Score = 36.5 bits (85), Expect = 0.002
 Identities = 17/77 (22%), Positives = 34/77 (44%), Gaps = 8/77 (10%)

Query: 16 GKYATVRRCRDRKNGTQYAAKFLRK----KRRSTDLKAEILHEVAVLEACRCNSRIVQLH 71
          G +  V   + R     +A K++ K    ++ S      +L+E  +L+       +V L 
Sbjct: 11 GAFGKVCIVQKRDTKKMFAMKYMNKQKCVEKGSV---RNVLNERRILQELNHPF-LVNLW 66

Query: 72 QVFESSHDMILLLELLT 88
            F+   +M L+++LL 
Sbjct: 67 YSFQDEENMYLVVDLLL 83

Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A. Length = 258

>gnl|CDD|173719 cd05630, STKc_GRK6, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6

 Score = 35.8 bits (82), Expect = 0.003
 Identities = 25/74 (33%), Positives = 39/74 (52%), Gaps = 4/74 (5%)

Query: 16 GKYATVRRCRDRKNGTQYAAKFLRKKR-RSTDLKAEILHEVAVLEACRCNSR-IVQLHQV 73
          G +  V  C+ R  G  YA K L KKR +    ++  L+E  +LE  + NSR +V L   
Sbjct: 11 GGFGEVCACQVRATGKMYACKKLEKKRIKKRKGESMALNEKQILE--KVNSRFVVSLAYA 68

Query: 74 FESSHDMILLLELL 87
          +E+   + L+L L+
Sbjct: 69 YETKDALCLVLTLM 82

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as multiple splice variants with different domain architectures. It is post-translationally palmitoylated and localized in the membrane. GRK6 plays important roles in the regulation of dopamine, M3 muscarinic, opioid, and chemokine receptor signaling. It also plays maladaptive roles in addiction and Parkinson's disease. GRK6-deficient mice exhibit altered dopamine receptor regulation, decreased lymphocyte chemotaxis, and increased acute inflammation and neutrophil chemotaxis. Length = 285

>gnl|CDD|173663 cd05572, STKc_cGK_PKG, Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase

 Score = 35.7 bits (83), Expect = 0.003
 Identities = 17/73 (23%), Positives = 34/73 (46%), Gaps = 2/73 (2%)

Query: 15 MGKYATVRRCRDRKNGTQYAAKFLRKKR-RSTDLKAEILHEVAVLEACRCNSRIVQLHQV 73
          +G +  V   + +     +A K ++K+    T  +  I  E  +LE C     IV+L++ 
Sbjct: 3  VGGFGRVELVKVKSKNRTFALKCVKKRHIVETGQQEHIFSEKEILEECNHPF-IVKLYRT 61

Query: 74 FESSHDMILLLEL 86
          F+    + +L+E 
Sbjct: 62 FKDKKYIYMLMEY 74

Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowing autophosphorylation and activation of the kinase. cGKI is a soluble protein expressed in all smooth muscles, platelets, cerebellum, and kidney. It is also expressed at lower concentrations in other tissues. cGKII is a membrane-bound protein that is most abundantly expressed in the intestine. It is also present in the brain nuclei, adrenal cortex, kidney, lung, and prostate. cGKI is involved in the regulation of smooth muscle tone, smooth cell proliferation, and platelet activation. cGKII plays a role in the regulation of secretion, such as renin secretion by the kidney and aldosterone secretion by the adrenal. It also regulates bone growth and the circadian rhythm. Length = 262

>gnl|CDD|173699 cd05608, STKc_GRK1, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1

 Score = 35.2 bits (81), Expect = 0.004
 Identities = 25/76 (32%), Positives = 39/76 (51%), Gaps = 8/76 (10%)

Query: 16 GKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEA---CRCNSR-IVQLH 71
          G +  V  C+ R  G  YA K L KKR    LK    +E A++E     + +SR IV L 
Sbjct: 4  GGFGEVSACQMRATGKLYACKKLNKKR----LKKRKGYEGAMVEKRILAKVHSRFIVSLA 59

Query: 72 QVFESSHDMILLLELL 87
            F++  D+ L++ ++
Sbjct: 60 YAFQTKTDLCLVMTIM 75

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual group of GRKs and is expressed in retinal cells. It phosphorylates rhodopsin in rod cells, which leads to termination of the phototransduction cascade. Mutations in GRK1 are associated to a recessively inherited form of stationary nightblindness called Oguchi disease. Length = 280

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	126
KOG0595|consensus	429		99.97
KOG0575|consensus	592		99.96
KOG0615|consensus	475		99.95
KOG0598|consensus	357		99.93
KOG0581|consensus	364		99.93
KOG0583|consensus	370		99.93
KOG0600|consensus	560		99.92
KOG0611|consensus	668		99.92
KOG0605|consensus	550		99.92
KOG0616|consensus	355		99.91
cd05599	364	STKc_NDR_like Catalytic domain of Nuclear Dbf2-Rel	99.91
KOG0597|consensus	808		99.91
KOG0592|consensus	604		99.91
KOG0659|consensus	318		99.91
KOG0610|consensus	459		99.91
cd05626	381	STKc_LATS2 Catalytic domain of the Protein Serine/	99.91
cd05629	377	STKc_NDR_like_fungal Catalytic domain of Fungal Nu	99.9
cd05628	363	STKc_NDR1 Catalytic domain of the Protein Serine/T	99.9
PTZ00263	329	protein kinase A catalytic subunit; Provisional	99.9
cd05598	376	STKc_LATS Catalytic domain of the Protein Serine/T	99.9
KOG0661|consensus	538		99.9
cd05625	382	STKc_LATS1 Catalytic domain of the Protein Serine/	99.9
KOG0663|consensus	419		99.9
KOG0588|consensus	786		99.9
cd05612	291	STKc_PRKX_like Catalytic domain of PRKX-like Prote	99.89
KOG0032|consensus	382		99.89
cd05600	333	STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p-	99.89
cd05571	323	STKc_PKB Catalytic domain of the Protein Serine/Th	99.89
KOG0194|consensus	474		99.89
cd05588	329	STKc_aPKC Catalytic domain of the Protein Serine/T	99.89
KOG4236|consensus	888		99.89
cd05595	323	STKc_PKB_beta Catalytic domain of the Protein Seri	99.89
KOG0582|consensus	516		99.89
cd05627	360	STKc_NDR2 Catalytic domain of the Protein Serine/T	99.89
KOG0198|consensus	313		99.89
KOG0586|consensus	596		99.89
cd05593	328	STKc_PKB_gamma Catalytic domain of the Protein Ser	99.89
cd05585	312	STKc_YPK1_like Catalytic domain of Yeast Protein K	99.88
KOG0192|consensus	362		99.88
KOG0591|consensus	375		99.88
PTZ00426	340	cAMP-dependent protein kinase catalytic subunit; P	99.88
cd07848	287	STKc_CDKL5 Catalytic domain of the Serine/Threonin	99.88
cd05582	318	STKc_RSK_N N-terminal catalytic domain of the Prot	99.88
cd05573	350	STKc_ROCK_NDR_like Catalytic domain of ROCK- and N	99.88
KOG0607|consensus	463		99.88
cd05615	323	STKc_cPKC_alpha Catalytic domain of the Protein Se	99.88
KOG0589|consensus	426		99.88
cd05587	324	STKc_cPKC Catalytic domain of the Protein Serine/T	99.88
cd05597	331	STKc_DMPK_like Catalytic domain of Myotonic Dystro	99.88
KOG0593|consensus	396		99.88
cd05590	320	STKc_nPKC_eta Catalytic domain of the Protein Seri	99.88
cd05596	370	STKc_ROCK Catalytic domain of the Protein Serine/T	99.88
cd05592	316	STKc_nPKC_theta_delta Catalytic domain of the Prot	99.88
cd05591	321	STKc_nPKC_epsilon Catalytic domain of the Protein	99.88
cd05617	327	STKc_aPKC_zeta Catalytic domain of the Protein Ser	99.88
cd05601	330	STKc_CRIK Catalytic domain of the Protein Serine/T	99.87
cd05624	331	STKc_MRCK_beta Catalytic domain of the Protein Ser	99.87
cd05570	318	STKc_PKC Catalytic domain of the Protein Serine/Th	99.87
cd05618	329	STKc_aPKC_iota Catalytic domain of the Protein Ser	99.87
cd05594	325	STKc_PKB_alpha Catalytic domain of the Protein Ser	99.87
KOG1187|consensus	361		99.87
cd05621	370	STKc_ROCK2 Catalytic domain of the Protein Serine/	99.87
KOG0580|consensus	281		99.87
cd05616	323	STKc_cPKC_beta Catalytic domain of the Protein Ser	99.87
cd05605	285	STKc_GRK4_like Catalytic domain of G protein-coupl	99.87
cd06630	268	STKc_MEKK1 Catalytic domain of the Protein Serine/	99.87
cd05631	285	STKc_GRK4 Catalytic domain of the Protein Serine/T	99.87
cd05622	371	STKc_ROCK1 Catalytic domain of the Protein Serine/	99.87
cd05619	316	STKc_nPKC_theta Catalytic domain of the Protein Se	99.87
cd06649	331	PKc_MEK2 Catalytic domain of the dual-specificity	99.87
cd05620	316	STKc_nPKC_delta Catalytic domain of the Protein Se	99.87
cd07869	303	STKc_PFTAIRE1 Catalytic domain of the Serine/Threo	99.86
KOG0660|consensus	359		99.86
cd07859	338	STKc_TDY_MAPK_plant Catalytic domain of the Serine	99.86
cd05575	323	STKc_SGK Catalytic domain of the Protein Serine/Th	99.86
KOG0197|consensus	468		99.86
cd05603	321	STKc_SGK2 Catalytic domain of the Protein Serine/T	99.86
cd08227	327	PK_STRAD_alpha Pseudokinase domain of STE20-relate	99.86
cd06650	333	PKc_MEK1 Catalytic domain of the dual-specificity	99.86
cd05608	280	STKc_GRK1 Catalytic domain of the Protein Serine/T	99.86
KOG4717|consensus	864		99.86
cd05064	266	PTKc_EphR_A10 Catalytic domain of the Protein Tyro	99.86
cd05580	290	STKc_PKA Catalytic domain of the Protein Serine/Th	99.86
cd07853	372	STKc_NLK Catalytic domain of the Serine/Threonine	99.86
cd05604	325	STKc_SGK3 Catalytic domain of the Protein Serine/T	99.86
cd07871	288	STKc_PCTAIRE3 Catalytic domain of the Serine/Threo	99.86
cd06646	267	STKc_MAP4K5 Catalytic domain of the Protein Serine	99.86
cd08221	256	STKc_Nek9 Catalytic domain of the Protein Serine/T	99.86
cd07847	286	STKc_CDKL1_4 Catalytic domain of the Serine/Threon	99.86
PF00069	260	Pkinase: Protein kinase domain Protein kinase; unc	99.86
cd05614	332	STKc_MSK2_N N-terminal catalytic domain of the Pro	99.86
cd06615	308	PKc_MEK Catalytic domain of the dual-specificity P	99.86
cd06625	263	STKc_MEKK3_like Catalytic domain of MAP/ERK kinase	99.86
KOG0585|consensus	576		99.86
cd05623	332	STKc_MRCK_alpha Catalytic domain of the Protein Se	99.86
cd06611	280	STKc_SLK_like Catalytic domain of Ste20-like kinas	99.86
cd05584	323	STKc_p70S6K Catalytic domain of the Protein Serine	99.86
cd05578	258	STKc_Yank1 Catalytic domain of the Protein Serine/	99.86
cd06645	267	STKc_MAP4K3 Catalytic domain of the Protein Serine	99.85
KOG0594|consensus	323		99.85
cd05610	669	STKc_MASTL Catalytic domain of the Protein Serine/	99.85
cd05602	325	STKc_SGK1 Catalytic domain of the Protein Serine/T	99.85
KOG0033|consensus	355		99.85
KOG0694|consensus	694		99.85
cd08529	256	STKc_FA2-like Catalytic domain of the Protein Seri	99.85
cd05586	330	STKc_Sck1_like Catalytic domain of Suppressor of l	99.85
cd07872	309	STKc_PCTAIRE2 Catalytic domain of the Serine/Threo	99.85
cd08228	267	STKc_Nek6 Catalytic domain of the Protein Serine/T	99.85
cd05630	285	STKc_GRK6 Catalytic domain of the Protein Serine/T	99.85
cd05084	252	PTKc_Fes Catalytic domain of the Protein Tyrosine	99.85
cd05632	285	STKc_GRK5 Catalytic domain of the Protein Serine/T	99.85
cd07841	298	STKc_CDK7 Catalytic domain of the Serine/Threonine	99.85
cd05609	305	STKc_MAST Catalytic domain of the Protein Serine/T	99.85
cd08220	256	STKc_Nek8 Catalytic domain of the Protein Serine/T	99.85
PTZ00266	1021	NIMA-related protein kinase; Provisional	99.85
cd08224	267	STKc_Nek6_Nek7 Catalytic domain of the Protein Ser	99.84
cd07846	286	STKc_CDKL2_3 Catalytic domain of the Serine/Threon	99.84
cd05607	277	STKc_GRK7 Catalytic domain of the Protein Serine/T	99.84
cd05589	324	STKc_PKN Catalytic domain of the Protein Serine/Th	99.84
PF07714	259	Pkinase_Tyr: Protein tyrosine kinase Protein kinas	99.84
cd06629	272	STKc_MAPKKK_Bck1_like Catalytic domain of fungal B	99.84
cd06626	264	STKc_MEKK4 Catalytic domain of the Protein Serine/	99.84
KOG0574|consensus	502		99.84
PHA03212	391	serine/threonine kinase US3; Provisional	99.84
cd06632	258	STKc_MEKK1_plant Catalytic domain of the Protein S	99.84
cd08218	256	STKc_Nek1 Catalytic domain of the Protein Serine/T	99.84
cd06628	267	STKc_MAPKKK_Byr2_like Catalytic domain of fungal B	99.84
PLN00034	353	mitogen-activated protein kinase kinase; Provision	99.84
cd05104	375	PTKc_Kit Catalytic domain of the Protein Tyrosine	99.84
KOG4250|consensus	732		99.84
PRK13184	932	pknD serine/threonine-protein kinase; Reviewed	99.84
cd07839	284	STKc_CDK5 Catalytic domain of the Serine/Threonine	99.84
cd07861	285	STKc_CDK1_euk Catalytic domain of the Serine/Threo	99.84
cd05096	304	PTKc_DDR1 Catalytic domain of the Protein Tyrosine	99.84
cd06613	262	STKc_MAP4K3_like Catalytic domain of Mitogen-activ	99.84
cd07833	288	STKc_CDKL Catalytic domain of Cyclin-Dependent pro	99.83
cd08229	267	STKc_Nek7 Catalytic domain of the Protein Serine/T	99.83
cd06652	265	STKc_MEKK2 Catalytic domain of the Protein Serine/	99.83
cd05577	277	STKc_GRK Catalytic domain of the Protein Serine/Th	99.83
cd06651	266	STKc_MEKK3 Catalytic domain of the Protein Serine/	99.83
cd07873	301	STKc_PCTAIRE1 Catalytic domain of the Serine/Threo	99.83
cd07843	293	STKc_CDC2L1 Catalytic domain of the Serine/Threoni	99.83
cd06623	264	PKc_MAPKK_plant_like Catalytic domain of Plant dua	99.83
cd06620	284	PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr	99.83
cd05572	262	STKc_cGK_PKG Catalytic domain of the Protein Serin	99.83
cd06631	265	STKc_YSK4 Catalytic domain of the Protein Serine/T	99.83
KOG0599|consensus	411		99.83
cd07832	286	STKc_CCRK Catalytic domain of the Serine/Threonine	99.83
cd06627	254	STKc_Cdc7_like Catalytic domain of Cell division c	99.83
cd05105	400	PTKc_PDGFR_alpha Catalytic domain of the Protein T	99.83
KOG1026|consensus	774		99.83
cd07876	359	STKc_JNK2 Catalytic domain of the Serine/Threonine	99.83
cd07837	295	STKc_CdkB_plant Catalytic domain of the Serine/Thr	99.83
cd05088	303	PTKc_Tie2 Catalytic domain of the Protein Tyrosine	99.83
cd07845	309	STKc_CDK10 Catalytic domain of the Serine/Threonin	99.83
cd06654	296	STKc_PAK1 Catalytic domain of the Protein Serine/T	99.83
cd06644	292	STKc_STK10_LOK Catalytic domain of the Protein Ser	99.83
cd05102	338	PTKc_VEGFR3 Catalytic domain of the Protein Tyrosi	99.83
cd05581	280	STKc_PDK1 Catalytic domain of the Protein Serine/T	99.83
cd05574	316	STKc_phototropin_like Catalytic domain of Phototro	99.83
cd07844	291	STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like	99.83
cd08219	255	STKc_Nek3 Catalytic domain of the Protein Serine/T	99.83
KOG0578|consensus	550		99.83
cd08226	328	PK_STRAD_beta Pseudokinase domain of STE20-related	99.82
cd08225	257	STKc_Nek5 Catalytic domain of the Protein Serine/T	99.82
cd06610	267	STKc_OSR1_SPAK Catalytic domain of the Protein Ser	99.82
cd06653	264	STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kina	99.82
cd05066	267	PTKc_EphR_A Catalytic domain of the Protein Tyrosi	99.82
PTZ00267	478	NIMA-related protein kinase; Provisional	99.82
cd08215	258	STKc_Nek Catalytic domain of the Protein Serine/Th	99.82
PTZ00283	496	serine/threonine protein kinase; Provisional	99.82
cd06624	268	STKc_ASK Catalytic domain of the Protein Serine/Th	99.82
cd05033	266	PTKc_EphR Catalytic domain of Ephrin Receptor Prot	99.82
cd05611	260	STKc_Rim15_like Catalytic domain of fungal Rim15-l	99.82
cd06656	297	STKc_PAK3 Catalytic domain of the Protein Serine/T	99.82
cd05106	374	PTKc_CSF-1R Catalytic domain of the Protein Tyrosi	99.82
cd06606	260	STKc_MAPKKK Catalytic domain of the Protein Serine	99.82
cd07860	284	STKc_CDK2_3 Catalytic domain of the Serine/Threoni	99.82
cd05613	290	STKc_MSK1_N N-terminal catalytic domain of the Pro	99.82
cd05065	269	PTKc_EphR_B Catalytic domain of the Protein Tyrosi	99.82
cd05116	257	PTKc_Syk Catalytic domain of the Protein Tyrosine	99.82
cd06619	279	PKc_MKK5 Catalytic domain of the dual-specificity	99.82
cd00192	262	PTKc Catalytic domain of Protein Tyrosine Kinases.	99.82
PLN00009	294	cyclin-dependent kinase A; Provisional	99.82
cd06609	274	STKc_MST3_like Catalytic domain of Mammalian Ste20	99.82
cd05114	256	PTKc_Tec_Rlk Catalytic domain of the Protein Tyros	99.82
KOG1989|consensus	738		99.82
cd06605	265	PKc_MAPKK Catalytic domain of the dual-specificity	99.82
cd07870	291	STKc_PFTAIRE2 Catalytic domain of the Serine/Threo	99.82
cd06641	277	STKc_MST3 Catalytic domain of the Protein Serine/T	99.82
cd05076	274	PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of th	99.81
cd05579	265	STKc_MAST_like Catalytic domain of Microtubule-ass	99.81
cd05633	279	STKc_GRK3 Catalytic domain of the Protein Serine/T	99.81
cd05107	401	PTKc_PDGFR_beta Catalytic domain of the Protein Ty	99.81
cd07865	310	STKc_CDK9 Catalytic domain of the Serine/Threonine	99.81
cd06917	277	STKc_NAK1_like Catalytic domain of Fungal Nak1-lik	99.81
cd08530	256	STKc_CNK2-like Catalytic domain of the Protein Ser	99.81
cd06640	277	STKc_MST4 Catalytic domain of the Protein Serine/T	99.81
cd07836	284	STKc_Pho85 Catalytic domain of the Serine/Threonin	99.81
cd05039	256	PTKc_Csk_like Catalytic domain of C-terminal Src k	99.81
cd05052	263	PTKc_Abl Catalytic domain of the Protein Tyrosine	99.81
cd07864	302	STKc_CDK12 Catalytic domain of the Serine/Threonin	99.81
cd05046	275	PTK_CCK4 Pseudokinase domain of the Protein Tyrosi	99.81
cd07874	355	STKc_JNK3 Catalytic domain of the Serine/Threonine	99.81
cd08217	265	STKc_Nek2 Catalytic domain of the Protein Serine/T	99.81
cd08223	257	STKc_Nek4 Catalytic domain of the Protein Serine/T	99.81
cd05093	288	PTKc_TrkB Catalytic domain of the Protein Tyrosine	99.81
cd06608	275	STKc_myosinIII_like Catalytic domain of Class III	99.81
cd06643	282	STKc_SLK Catalytic domain of the Protein Serine/Th	99.81
cd06621	287	PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek	99.81
cd05063	268	PTKc_EphR_A2 Catalytic domain of the Protein Tyros	99.81
cd05055	302	PTKc_PDGFR Catalytic domain of the Protein Tyrosin	99.81
KOG0690|consensus	516		99.81
cd05059	256	PTKc_Tec_like Catalytic domain of Tec-like Protein	99.81
cd05081	284	PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of	99.8
cd06614	286	STKc_PAK Catalytic domain of the Protein Serine/Th	99.8
cd06655	296	STKc_PAK2 Catalytic domain of the Protein Serine/T	99.8
cd06647	293	STKc_PAK_I Catalytic domain of the Protein Serine/	99.8
cd07875	364	STKc_JNK1 Catalytic domain of the Serine/Threonine	99.8
cd05113	256	PTKc_Btk_Bmx Catalytic domain of the Protein Tyros	99.8
cd06622	286	PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS	99.8
cd07855	334	STKc_ERK5 Catalytic domain of the Serine/Threonine	99.8
cd05060	257	PTKc_Syk_like Catalytic domain of Spleen Tyrosine	99.8
cd05051	296	PTKc_DDR Catalytic domain of the Protein Tyrosine	99.8
cd05103	343	PTKc_VEGFR2 Catalytic domain of the Protein Tyrosi	99.8
cd07878	343	STKc_p38beta_MAPK11 Catalytic domain of the Serine	99.8
cd05606	278	STKc_beta_ARK Catalytic domain of the Protein Seri	99.8
cd07858	337	STKc_TEY_MAPK_plant Catalytic domain of the Serine	99.8
KOG0658|consensus	364		99.8
cd07863	288	STKc_CDK4 Catalytic domain of the Serine/Threonine	99.8
cd05036	277	PTKc_ALK_LTK Catalytic domain of the Protein Tyros	99.8
cd06612	256	STKc_MST1_2 Catalytic domain of the Protein Serine	99.8
KOG0667|consensus	586		99.8
PHA02988	283	hypothetical protein; Provisional	99.8
cd05048	283	PTKc_Ror Catalytic Domain of the Protein Tyrosine	99.8
cd05098	307	PTKc_FGFR1 Catalytic domain of the Protein Tyrosin	99.8
cd06638	286	STKc_myosinIIIA Catalytic domain of the Protein Se	99.8
cd05035	273	PTKc_Axl_like Catalytic Domain of Axl-like Protein	99.8
cd06642	277	STKc_STK25-YSK1 Catalytic domain of the Protein Se	99.8
cd07835	283	STKc_CDK1_like Catalytic domain of Cyclin-Dependen	99.8
PTZ00024	335	cyclin-dependent protein kinase; Provisional	99.8
KOG1152|consensus	772		99.8
cd05090	283	PTKc_Ror1 Catalytic domain of the Protein Tyrosine	99.8
cd05037	259	PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the	99.8
cd05078	258	PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain	99.8
cd05034	261	PTKc_Src_like Catalytic domain of Src kinase-like	99.8
cd07862	290	STKc_CDK6 Catalytic domain of the Serine/Threonine	99.8
cd06607	307	STKc_TAO Catalytic domain of the Protein Serine/Th	99.79
cd05089	297	PTKc_Tie1 Catalytic domain of the Protein Tyrosine	99.79
KOG0662|consensus	292		99.79
cd07880	343	STKc_p38gamma_MAPK12 Catalytic domain of the Serin	99.79
cd07866	311	STKc_BUR1 Catalytic domain of the Serine/Threonine	99.79
cd05148	261	PTKc_Srm_Brk Catalytic domain of the Protein Tyros	99.79
cd06637	272	STKc_TNIK Catalytic domain of the Protein Serine/T	99.79
PTZ00036	440	glycogen synthase kinase; Provisional	99.79
cd06617	283	PKc_MKK3_6 Catalytic domain of the dual-specificit	99.79
PHA03209	357	serine/threonine kinase US3; Provisional	99.79
cd05092	280	PTKc_TrkA Catalytic domain of the Protein Tyrosine	99.79
cd05097	295	PTKc_DDR_like Catalytic domain of Discoidin Domain	99.79
cd05047	270	PTKc_Tie Catalytic domain of Tie Protein Tyrosine	99.79
cd05123	250	STKc_AGC Catalytic domain of AGC family Protein Se	99.79
cd05079	284	PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the	99.79
cd05040	257	PTKc_Ack_like Catalytic domain of the Protein Tyro	99.79
cd05068	261	PTKc_Frk_like Catalytic domain of Fyn-related kina	99.79
cd05049	280	PTKc_Trk Catalytic domain of the Protein Tyrosine	99.79
smart00219	258	TyrKc Tyrosine kinase, catalytic domain. Phosphotr	99.79
cd07840	287	STKc_CDK9_like Catalytic domain of Cyclin-Dependen	99.79
cd05072	261	PTKc_Lyn Catalytic domain of the Protein Tyrosine	99.79
cd05583	288	STKc_MSK_N N-terminal catalytic domain of the Prot	99.79
cd05038	284	PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the P	99.79
cd06635	317	STKc_TAO1 Catalytic domain of the Protein Serine/T	99.79
cd05057	279	PTKc_EGFR_like Catalytic domain of Epidermal Growt	99.79
cd05108	316	PTKc_EGFR Catalytic domain of the Protein Tyrosine	99.79
cd05087	269	PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein	99.79
KOG0612|consensus	1317		99.79
cd05041	251	PTKc_Fes_like Catalytic domain of Fes-like Protein	99.79
cd05042	269	PTKc_Aatyk Catalytic domain of the Protein Tyrosin	99.78
cd05067	260	PTKc_Lck_Blk Catalytic domain of the Protein Tyros	99.78
cd05032	277	PTKc_InsR_like Catalytic domain of Insulin Recepto	99.78
cd05062	277	PTKc_IGF-1R Catalytic domain of the Protein Tyrosi	99.78
PHA03390	267	pk1 serine/threonine-protein kinase 1; Provisional	99.78
cd07850	353	STKc_JNK Catalytic domain of the Serine/Threonine	99.78
cd06648	285	STKc_PAK_II Catalytic domain of the Protein Serine	99.78
cd06633	313	STKc_TAO3 Catalytic domain of the Protein Serine/T	99.78
KOG0201|consensus	467		99.78
cd07831	282	STKc_MOK Catalytic domain of the Serine/Threonine	99.78
cd06658	292	STKc_PAK5 Catalytic domain of the Protein Serine/T	99.78
KOG0196|consensus	996		99.78
cd06659	297	STKc_PAK6 Catalytic domain of the Protein Serine/T	99.78
cd05053	293	PTKc_FGFR Catalytic domain of the Protein Tyrosine	99.78
cd07856	328	STKc_Sty1_Hog1 Catalytic domain of the Serine/Thre	99.78
cd06639	291	STKc_myosinIIIB Catalytic domain of the Protein Se	99.78
cd05115	257	PTKc_Zap-70 Catalytic domain of the Protein Tyrosi	99.78
cd05085	250	PTKc_Fer Catalytic domain of the Protein Tyrosine	99.78
cd05071	262	PTKc_Src Catalytic domain of the Protein Tyrosine	99.78
cd05122	253	PKc_STE Catalytic domain of STE family Protein Kin	99.78
cd06657	292	STKc_PAK4 Catalytic domain of the Protein Serine/T	99.78
cd07834	330	STKc_MAPK Catalytic domain of the Serine/Threonine	99.78
cd05094	291	PTKc_TrkC Catalytic domain of the Protein Tyrosine	99.78
KOG1095|consensus	1025		99.78
PHA03211	461	serine/threonine kinase US3; Provisional	99.78
cd05061	288	PTKc_InsR Catalytic domain of the Protein Tyrosine	99.78
KOG1094|consensus	807		99.78
cd05075	272	PTKc_Axl Catalytic domain of the Protein Tyrosine	99.78
cd05077	262	PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of th	99.78
KOG0584|consensus	632		99.77
cd06636	282	STKc_MAP4K4_6 Catalytic domain of the Protein Seri	99.77
cd07842	316	STKc_CDK8_like Catalytic domain of Cyclin-Dependen	99.77
cd07868	317	STKc_CDK8 Catalytic domain of the Serine/Threonine	99.77
cd05095	296	PTKc_DDR2 Catalytic domain of the Protein Tyrosine	99.77
cd05050	288	PTKc_Musk Catalytic domain of the Protein Tyrosine	99.77
KOG0193|consensus	678		99.77
cd05112	256	PTKc_Itk Catalytic domain of the Protein Tyrosine	99.77
cd05099	314	PTKc_FGFR4 Catalytic domain of the Protein Tyrosin	99.77
cd05101	304	PTKc_FGFR2 Catalytic domain of the Protein Tyrosin	99.77
cd07857	332	STKc_MPK1 Catalytic domain of the Serine/Threonine	99.77
cd05080	283	PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the	99.77
KOG0604|consensus	400		99.77
cd07852	337	STKc_MAPK15 Catalytic domain of the Serine/Threoni	99.77
cd05045	290	PTKc_RET Catalytic domain of the Protein Tyrosine	99.76
PHA03207	392	serine/threonine kinase US3; Provisional	99.76
cd07877	345	STKc_p38alpha_MAPK14 Catalytic domain of the Serin	99.76
cd05069	260	PTKc_Yes Catalytic domain of the Protein Tyrosine	99.76
cd05070	260	PTKc_Fyn_Yrk Catalytic domain of the Protein Tyros	99.76
cd05054	337	PTKc_VEGFR Catalytic domain of the Protein Tyrosin	99.76
cd07829	282	STKc_CDK_like Catalytic domain of Cyclin-Dependent	99.76
cd07854	342	STKc_MAPK4_6 Catalytic domain of the Serine/Threon	99.76
cd05118	283	STKc_CMGC Catalytic domain of CMGC family Serine/T	99.76
cd05044	269	PTKc_c-ros Catalytic domain of the Protein Tyrosin	99.76
cd05109	279	PTKc_HER2 Catalytic domain of the Protein Tyrosine	99.76
cd05086	268	PTKc_Aatyk2 Catalytic domain of the Protein Tyrosi	99.76
cd05100	334	PTKc_FGFR3 Catalytic domain of the Protein Tyrosin	99.76
PLN00113	968	leucine-rich repeat receptor-like protein kinase;	99.76
KOG4279|consensus	1226		99.76
cd07838	287	STKc_CDK4_6_like Catalytic domain of Cyclin-Depend	99.76
cd05091	283	PTKc_Ror2 Catalytic domain of the Protein Tyrosine	99.76
cd08216	314	PK_STRAD Pseudokinase domain of STE20-related kina	99.76
cd05043	280	PTK_Ryk Pseudokinase domain of Ryk (Receptor relat	99.76
cd05111	279	PTK_HER3 Pseudokinase domain of the Protein Tyrosi	99.75
cd07851	343	STKc_p38 Catalytic domain of the Serine/Threonine	99.75
cd05073	260	PTKc_Hck Catalytic domain of the Protein Tyrosine	99.75
cd07867	317	STKc_CDC2L6 Catalytic domain of Serine/Threonine K	99.75
cd05056	270	PTKc_FAK Catalytic domain of the Protein Tyrosine	99.75
KOG0577|consensus	948		99.75
cd07849	336	STKc_ERK1_2_like Catalytic domain of Extracellular	99.75
KOG0608|consensus	1034		99.75
cd06634	308	STKc_TAO2 Catalytic domain of the Protein Serine/T	99.74
cd05082	256	PTKc_Csk Catalytic domain of the Protein Tyrosine	99.74
cd05083	254	PTKc_Chk Catalytic domain of the Protein Tyrosine	99.74
cd05576	237	STKc_RPK118_like Catalytic domain of the Protein S	99.74
KOG2345|consensus	302		99.74
cd07830	283	STKc_MAK_like Catalytic domain of Male germ cell-A	99.74
cd08222	260	STKc_Nek11 Catalytic domain of the Protein Serine/	99.74
cd05074	273	PTKc_Tyro3 Catalytic domain of the Protein Tyrosin	99.73
PTZ00284	467	protein kinase; Provisional	99.73
KOG1151|consensus	775		99.73
cd05058	262	PTKc_Met_Ron Catalytic domain of the Protein Tyros	99.73
KOG0666|consensus	438		99.73
cd06616	288	PKc_MKK4 Catalytic domain of the dual-specificity	99.73
cd08528	269	STKc_Nek10 Catalytic domain of the Protein Serine/	99.73
KOG4278|consensus	1157		99.73
cd05110	303	PTKc_HER4 Catalytic domain of the Protein Tyrosine	99.72
cd05147	190	RIO1_euk RIO kinase family; eukaryotic RIO1, catal	99.72
cd07879	342	STKc_p38delta_MAPK13 Catalytic domain of the Serin	99.72
KOG0579|consensus	1187		99.72
cd06618	296	PKc_MKK7 Catalytic domain of the dual-specificity	99.72
KOG0986|consensus	591		99.7
KOG0587|consensus	953		99.7
KOG1025|consensus	1177		99.7
smart00221	225	STYKc Protein kinase; unclassified specificity. Ph	99.7
KOG0199|consensus	1039		99.7
KOG0576|consensus	829		99.69
PRK09188	365	serine/threonine protein kinase; Provisional	99.69
KOG4257|consensus	974		99.69
KOG1290|consensus	590		99.69
cd00180	215	PKc Catalytic domain of Protein Kinases. Protein K	99.68
KOG1035|consensus	1351		99.68
KOG0695|consensus	593		99.68
KOG4721|consensus	904		99.67
KOG4645|consensus	1509		99.67
PRK10345	210	hypothetical protein; Provisional	99.66
cd05145	190	RIO1_like RIO kinase family; RIO1, RIO3 and simila	99.66
KOG0668|consensus	338		99.65
PHA03210	501	serine/threonine kinase US3; Provisional	99.63
smart00220	244	S_TKc Serine/Threonine protein kinases, catalytic	99.62
KOG1006|consensus	361		99.62
KOG2052|consensus	513		99.62
KOG0696|consensus	683		99.62
KOG0664|consensus	449		99.61
KOG0614|consensus	732		99.6
KOG0671|consensus	415		99.59
KOG0596|consensus	677		99.58
KOG0200|consensus	609		99.58
KOG0984|consensus	282		99.57
PLN03224	507	probable serine/threonine protein kinase; Provisio	99.54
smart00090	237	RIO RIO-like kinase.	99.54
KOG3653|consensus	534		99.54
PRK14879	211	serine/threonine protein kinase; Provisional	99.51
KOG0669|consensus	376		99.51
KOG0603|consensus	612		99.5
KOG1167|consensus	418		99.5
KOG0983|consensus	391		99.5
PHA02882	294	putative serine/threonine kinase; Provisional	99.49
KOG1345|consensus	378		99.48
KOG1164|consensus	322		99.47
KOG1163|consensus	341		99.45
TIGR03724	199	arch_bud32 Kae1-associated kinase Bud32. Members o	99.44
PLN03225	566	Serine/threonine-protein kinase SNT7; Provisional	99.42
PRK10359	232	lipopolysaccharide core biosynthesis protein; Prov	99.41
KOG1165|consensus	449		99.4
KOG1166|consensus	974		99.38
PRK09605	535	bifunctional UGMP family protein/serine/threonine	99.36
KOG1027|consensus	903		99.35
KOG0670|consensus	752		99.3
COG0515	384	SPS1 Serine/threonine protein kinase [General func	99.27
cd05144	198	RIO2_C RIO kinase family; RIO2, C-terminal catalyt	99.25
PRK12274	218	serine/threonine protein kinase; Provisional	99.24
KOG0665|consensus	369		99.22
cd05120	155	APH_ChoK_like Aminoglycoside 3'-phosphotransferase	99.17
cd05119	187	RIO RIO kinase family, catalytic domain. The RIO k	99.16
KOG0195|consensus	448		98.93
PRK01723	239	3-deoxy-D-manno-octulosonic-acid kinase; Reviewed	98.87
cd05154	223	ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 an	98.84
KOG1024|consensus	563		98.83
PRK04750	537	ubiB putative ubiquinone biosynthesis protein UbiB	98.79
KOG0590|consensus	601		98.78
KOG0603|consensus	612		98.69
KOG3741|consensus	655		98.5
cd05151	170	ChoK Choline Kinase (ChoK). The ChoK subfamily is	98.48
TIGR01982	437	UbiB 2-polyprenylphenol 6-hydroxylase. This model	98.41
cd05146	197	RIO3_euk RIO kinase family; eukaryotic RIO3, catal	98.41
KOG1243|consensus	690		98.17
PF14531	288	Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_	97.97
PLN00181	793	protein SPA1-RELATED; Provisional	97.91
PF01636	239	APH: Phosphotransferase enzyme family This family	97.9
PLN02876	822	acyl-CoA dehydrogenase	97.85
PRK10593	297	hypothetical protein; Provisional	97.72
KOG1240|consensus	1431		97.71
KOG0601|consensus	524		97.7
KOG0590|consensus	601		97.68
KOG3087|consensus	229		97.67
TIGR02172	226	Fb_sc_TIGR02172 Fibrobacter succinogenes paralogou	97.66
KOG1023|consensus	484		97.65
KOG0601|consensus	524		97.63
COG3642	204	Mn2+-dependent serine/threonine protein kinase [Si	97.6
PRK15123	268	lipopolysaccharide core heptose(I) kinase RfaP; Pr	97.59
KOG4158|consensus	598		97.54
KOG1266|consensus	458		97.47
cd05150	244	APH Aminoglycoside 3'-phosphotransferase (APH). Th	97.41
COG2112	201	Predicted Ser/Thr protein kinase [Signal transduct	97.36
COG0661	517	AarF Predicted unusual protein kinase [General fun	97.1
PF06293	206	Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family;	97.08
PF10707	199	YrbL-PhoP_reg: PhoP regulatory network protein Yrb	96.81
PRK09902	216	hypothetical protein; Provisional	96.69
KOG1235|consensus	538		96.51
PF01163	188	RIO1: RIO1 family; InterPro: IPR018934 Protein pho	96.37
KOG1033|consensus	516		96.13
PF03109	119	ABC1: ABC1 family; InterPro: IPR004147 This entry	96.13
cd05157	235	ETNK_euk Ethanolamine kinase (ETNK) in eukaryotes.	96.04
COG0478	304	RIO-like serine/threonine protein kinase fused to	95.75
PRK09550	401	mtnK methylthioribose kinase; Reviewed	95.55
KOG0606|consensus	1205		95.47
cd05155	235	APH_ChoK_like_1 Uncharacterized bacterial proteins	95.43
PF13095	207	FTA2: Kinetochore Sim4 complex subunit FTA2	95.23
KOG0576|consensus	829		94.89
PF03881	288	Fructosamin_kin: Fructosamine kinase; InterPro: IP	94.43
PF12260	188	PIP49_C: Protein-kinase domain of FAM69; InterPro:	94.17
PRK12396	409	5-methylribose kinase; Reviewed	93.67
KOG2270|consensus	520		93.58
cd05153	296	HomoserineK_II Homoserine Kinase, type II. Homoser	93.51
COG1718	268	RIO1 Serine/threonine protein kinase involved in c	93.31
cd05156	302	ChoK_euk Choline Kinase (ChoK) in eukaryotes. The	93.19
TIGR02721	256	ycfN_thiK thiamine kinase. Members of this family	92.74
COG3001	286	Uncharacterized protein conserved in bacteria [Fun	90.09
COG3173	321	Predicted aminoglycoside phosphotransferase [Gener	90.02
PLN02756	418	S-methyl-5-thioribose kinase	89.63
KOG0606|consensus	1205		88.96
KOG1035|consensus	1351		88.34
TIGR00938	307	thrB_alt homoserine kinase, Neisseria type. Homose	85.48
PF04655	253	APH_6_hur: Aminoglycoside/hydroxyurea antibiotic r	84.74
COG3231	266	Aph Aminoglycoside phosphotransferase [Translation	83.94
TIGR01767	370	MTRK 5-methylthioribose kinase. This enzyme is inv	82.18
PTZ00384	383	choline kinase; Provisional	82.08
KOG1033|consensus	516		81.98
PF06176	229	WaaY: Lipopolysaccharide core biosynthesis protein	81.35

>KOG0595|consensus

Probab=99.97  E-value=3.5e-30  Score=167.40  Aligned_cols=124  Identities=22%  Similarity=0.261  Sum_probs=115.2

Q ss_pred             cccccccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeEE
Q psy8006           2 NNIKNIISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMI   81 (126)
Q Consensus         2 ~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~~   81 (126)
                      ..+.+|...+.||.|+||.||+|.++.++..+|||.+....+..+....+..|+.+++.++| ||||.+.+++..++++|
T Consensus         7 ~~~~~y~~~~~iG~GsfavVykg~h~~~~~~VAIK~i~~~~l~~k~~e~L~~Ei~iLkel~H-~nIV~l~d~~~~~~~i~   85 (429)
T KOG0595|consen    7 RVVGDYELSREIGSGSFAVVYKGRHKKSGTEVAIKCIAKKKLNKKLVELLLSEIKILKELKH-PNIVRLLDCIEDDDFIY   85 (429)
T ss_pred             cccccceehhhccCcceEEEEEeEeccCCceEEeeeehhhccCHHHHHHHHHHHHHHHhcCC-cceeeEEEEEecCCeEE
Confidence            45667888888999999999999999999999999999987766666669999999999998 99999999999999999


Q ss_pred             EEEeccCcccHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          82 LLLELLTSAVDSKIRESFGSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        82 lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      +|||||++|+|.+++++++.+++..++.++.|++.|+++||+..|
T Consensus        86 lVMEyC~gGDLs~yi~~~~~l~e~t~r~Fm~QLA~alq~L~~~~I  130 (429)
T KOG0595|consen   86 LVMEYCNGGDLSDYIRRRGRLPEATARHFMQQLASALQFLHENNI  130 (429)
T ss_pred             EEEEeCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence            999999999999999998899999999999999999999998764

>KOG0575|consensus

Probab=99.96  E-value=1.3e-27  Score=161.53  Aligned_cols=120  Identities=19%  Similarity=0.255  Sum_probs=111.9

Q ss_pred             cccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCC-chhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeEEEEE
Q psy8006           6 NIISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRS-TDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLL   84 (126)
Q Consensus         6 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~-~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~~lv~   84 (126)
                      .|..+++||+|+|+.||.+.+..+|..+|+|++.+..+. ...++.+.+|+++.+.++| ||||+++++|++.+.+|||.
T Consensus        19 ~Y~~g~~LGkGgFA~cYe~~~~~tge~~A~KvVpk~~l~k~~~reKv~~EIeIHr~L~H-pnIV~f~~~FEDs~nVYivL   97 (592)
T KOG0575|consen   19 RYKRGRFLGKGGFARCYEARDLDTGEVVAVKVVPKKLLKKPKQREKVLNEIEIHRSLKH-PNIVQFYHFFEDSNNVYIVL   97 (592)
T ss_pred             eeeeeeeeccCcceEEEEEEEcCCCcEEEEEEeehHHhcCcchHHHHHHHHHHHHhcCC-CcEEeeeeEeecCCceEEEE
Confidence            488899999999999999999999999999999987653 3445579999999999999 99999999999999999999


Q ss_pred             eccCcccHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          85 ELLTSAVDSKIRESFGSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        85 e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      |+|..++|..+++++.+++|.+++.+++||+.|+.|||+.+|
T Consensus        98 ELC~~~sL~el~Krrk~ltEpEary~l~QIv~GlkYLH~~~I  139 (592)
T KOG0575|consen   98 ELCHRGSLMELLKRRKPLTEPEARYFLRQIVEGLKYLHSLGI  139 (592)
T ss_pred             EecCCccHHHHHHhcCCCCcHHHHHHHHHHHHHHHHHHhcCc
Confidence            999999999999988999999999999999999999999875

>KOG0615|consensus

Probab=99.95  E-value=2.4e-27  Score=154.70  Aligned_cols=121  Identities=17%  Similarity=0.190  Sum_probs=108.7

Q ss_pred             ccccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCch-----hHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCe
Q psy8006           5 KNIISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTD-----LKAEILHEVAVLEACRCNSRIVQLHQVFESSHD   79 (126)
Q Consensus         5 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~-----~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~   79 (126)
                      +.|...+.||+|+||.|.+|..+++|+.||+|++........     ......+|+++|++++| |+||++++.|..+++
T Consensus       172 d~yii~~~LGsGafg~Vkla~e~~tgk~vAiKIi~krk~~~~s~~~~~~~~v~~EieILkkL~H-P~IV~~~d~f~~~ds  250 (475)
T KOG0615|consen  172 DYYIISKTLGSGAFGLVKLAYEKKTGKQVAIKIINKRKSTGCSRAIAKTRDVQNEIEILKKLSH-PNIVRIKDFFEVPDS  250 (475)
T ss_pred             ceeEeeeeecCCceeEEEEEEEcccCcEEEeeeeehhhcccccccccchhhhHHHHHHHHhcCC-CCEEEEeeeeecCCc
Confidence            346778999999999999999999999999999998654321     12236799999999999 999999999999999


Q ss_pred             EEEEEeccCcccHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          80 MILLLELLTSAVDSKIRESFGSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        80 ~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      .|+||||++||+|.+.+-.+..+.+.....+++|++.|+.|||+.||
T Consensus       251 ~YmVlE~v~GGeLfd~vv~nk~l~ed~~K~~f~Qll~avkYLH~~GI  297 (475)
T KOG0615|consen  251 SYMVLEYVEGGELFDKVVANKYLREDLGKLLFKQLLTAVKYLHSQGI  297 (475)
T ss_pred             eEEEEEEecCccHHHHHHhccccccchhHHHHHHHHHHHHHHHHcCc
Confidence            99999999999999999888889999999999999999999999986

>KOG0598|consensus

Probab=99.93  E-value=2.2e-25  Score=143.49  Aligned_cols=122  Identities=20%  Similarity=0.201  Sum_probs=112.5

Q ss_pred             cccccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCch-hHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeEEE
Q psy8006           4 IKNIISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTD-LKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMIL   82 (126)
Q Consensus         4 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~-~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~~l   82 (126)
                      .+.|..-++||+|+||+|+.++.+.+++.+|+|+++++..-.. .......|..++.+++| |.||.++..|.+.+.+|+
T Consensus        24 ~~dF~~lkviGkG~fGkV~~Vrk~dt~kiYAmKvl~K~~iv~~~e~~~~~~Er~IL~~v~h-PFiv~l~ysFQt~~kLyl  102 (357)
T KOG0598|consen   24 PDDFEILKVIGKGSFGKVFQVRKKDTGKIYAMKVLKKKKIVEKKEVRHTKAERNILSKIKH-PFIVKLIYSFQTEEKLYL  102 (357)
T ss_pred             hhheeeeeeeeccCCceEEEEEEcccCceeehhhhhhhHhhhhhhHHHHHHHHHHHHhCCC-CcEeeeEEecccCCeEEE
Confidence            5567788999999999999999999999999999998876443 34468999999999999 999999999999999999


Q ss_pred             EEeccCcccHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          83 LLELLTSAVDSKIRESFGSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        83 v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      |+||+.||.|...+++.+.|+|..++.++..|+.||.|||+.+|
T Consensus       103 Vld~~~GGeLf~hL~~eg~F~E~~arfYlaEi~lAL~~LH~~gI  146 (357)
T KOG0598|consen  103 VLDYLNGGELFYHLQREGRFSEDRARFYLAEIVLALGYLHSKGI  146 (357)
T ss_pred             EEeccCCccHHHHHHhcCCcchhHHHHHHHHHHHHHHHHHhCCe
Confidence            99999999999999998999999999999999999999999885

>KOG0581|consensus

Probab=99.93  E-value=6e-25  Score=141.64  Aligned_cols=117  Identities=21%  Similarity=0.298  Sum_probs=106.5

Q ss_pred             ccccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCe-EEEE
Q psy8006           5 KNIISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHD-MILL   83 (126)
Q Consensus         5 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~-~~lv   83 (126)
                      +++...+.||+|..|+|+++.|+.++..+|+|++... .++..++++.+|+++++.+++ |+||.+|++|..++. ++|+
T Consensus        79 ~dle~~~~lG~G~gG~V~kv~Hk~t~~i~AlK~I~~~-~~~~~~~Qi~rEl~il~~~~s-pyIV~~ygaF~~~~~~isI~  156 (364)
T KOG0581|consen   79 SDLERLGVLGSGNGGTVYKVRHKPTGKIYALKVILLN-IDPALQKQILRELEILRSCQS-PYIVGFYGAFYSNGEEISIC  156 (364)
T ss_pred             HHhhhhhhcccCCCcEEEEEEEcCCCeEEEEEeeccc-CCHHHHHHHHHHHHHHhhCCC-CCeeeEeEEEEeCCceEEee
Confidence            3566678999999999999999999999999999543 345567789999999999988 999999999999994 9999


Q ss_pred             EeccCcccHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhhc
Q psy8006          84 LELLTSAVDSKIRESFGSKSESGVQNCLEPSISVFSSLSK  123 (126)
Q Consensus        84 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~l~~  123 (126)
                      ||||++|+|.++++.-+.++|.....++.+++++|.|||+
T Consensus       157 mEYMDgGSLd~~~k~~g~i~E~~L~~ia~~VL~GL~YLh~  196 (364)
T KOG0581|consen  157 MEYMDGGSLDDILKRVGRIPEPVLGKIARAVLRGLSYLHE  196 (364)
T ss_pred             hhhcCCCCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhh
Confidence            9999999999999987889999999999999999999995

>KOG0583|consensus

Probab=99.93  E-value=9.3e-25  Score=145.07  Aligned_cols=123  Identities=19%  Similarity=0.256  Sum_probs=109.0

Q ss_pred             cccccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCC---chhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeE
Q psy8006           4 IKNIISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRS---TDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDM   80 (126)
Q Consensus         4 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~---~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~   80 (126)
                      ..+|..++.||+|+||+|+.|.+..++..+|+|++++....   ....+.+.+|+.+++.+.+||||+++++++..+..+
T Consensus        16 ~g~y~~~~~lG~GsfgkV~~a~~~~t~~~vAiKii~~~~~~~~~~~~~~~i~rEi~~~~~~~~HpnI~~l~ev~~t~~~~   95 (370)
T KOG0583|consen   16 IGKYELGRTLGSGSFGKVKLAKHRLTGEKVAIKIIDRKKVSSKSQKLDELIKREISILRRLRSHPNIIRLLEVFATPTKI   95 (370)
T ss_pred             cCceeeeeeecCCCCeeEEEeeeccCCCeEEEEEechhcccccccccchhhHHHHHHHHHhccCCCEeEEEEEEecCCeE
Confidence            34788899999999999999999999999999988875332   123345779999999999459999999999999999


Q ss_pred             EEEEeccCcccHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          81 ILLLELLTSAVDSKIRESFGSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        81 ~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      |+||||+.+|+|.+++.+.+.++|.+++.+|+|+++|++|+|..++
T Consensus        96 ~ivmEy~~gGdL~~~i~~~g~l~E~~ar~~F~Qlisav~y~H~~gi  141 (370)
T KOG0583|consen   96 YIVMEYCSGGDLFDYIVNKGRLKEDEARKYFRQLISAVAYCHSRGI  141 (370)
T ss_pred             EEEEEecCCccHHHHHHHcCCCChHHHHHHHHHHHHHHHHHHhCCE
Confidence            9999999999999999888899999999999999999999999864

>KOG0600|consensus

Probab=99.92  E-value=7.6e-25  Score=145.95  Aligned_cols=120  Identities=16%  Similarity=0.190  Sum_probs=106.5

Q ss_pred             ccccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeC--CeEEE
Q psy8006           5 KNIISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESS--HDMIL   82 (126)
Q Consensus         5 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~--~~~~l   82 (126)
                      ..|...+.||+|+||.||+|++..+|+.||+|.++.....++......||+.+|+++.| |||+++.+++...  ..+|+
T Consensus       117 ~~feki~kIGeGTyg~VYkAr~~~tgkivALKKvr~d~~~~~~~~t~~REI~ILr~l~H-pNIikL~eivt~~~~~siYl  195 (560)
T KOG0600|consen  117 DSFEKIEKIGEGTYGQVYKARDLETGKIVALKKVRFDNEKEGFPITAIREIKILRRLDH-PNIIKLEEIVTSKLSGSIYL  195 (560)
T ss_pred             HHHHHHHHhcCcchhheeEeeecccCcEEEEEEeecccCCCcchHHHHHHHHHHHhcCC-CcccceeeEEEecCCceEEE
Confidence            34666789999999999999999999999999999887766666678999999999999 9999999999866  68999


Q ss_pred             EEeccCcccHHHHHHhc-CCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          83 LLELLTSAVDSKIRESF-GSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        83 v~e~~~~~~L~~~~~~~-~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      |+|||+.+ |.-++... -+|++.++..++.|++.+++|+|..++
T Consensus       196 VFeYMdhD-L~GLl~~p~vkft~~qIKc~mkQLl~Gl~~cH~~gv  239 (560)
T KOG0600|consen  196 VFEYMDHD-LSGLLSSPGVKFTEPQIKCYMKQLLEGLEYCHSRGV  239 (560)
T ss_pred             EEecccch-hhhhhcCCCcccChHHHHHHHHHHHHHHHHHhhcCe
Confidence            99999999 76666653 489999999999999999999998864

>KOG0611|consensus

Probab=99.92  E-value=6.7e-25  Score=144.15  Aligned_cols=118  Identities=19%  Similarity=0.265  Sum_probs=108.6

Q ss_pred             ccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCc-hhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeEEEEEe
Q psy8006           7 IISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRST-DLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLLE   85 (126)
Q Consensus         7 ~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~-~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~~lv~e   85 (126)
                      |...+.||+|.||+|-+|.....|+.||||.|++....+ .+...+.+|+++|..++| |||+++++.|++.+.+.||||
T Consensus        55 yE~~etLGkGTYGKVk~A~e~~sgR~VAiKsIrKdkIkdeqDlvhIRREIeIMSsLNH-PhII~IyEVFENkdKIvivME  133 (668)
T KOG0611|consen   55 YEITETLGKGTYGKVKLAYEHKSGREVAIKSIRKDKIKDEQDLVHIRREIEIMSSLNH-PHIIQIYEVFENKDKIVIVME  133 (668)
T ss_pred             HHHHHHhcCCcccceeehhhccCCcEeehhhhhhhhcccHHHHHHHHHHHHHHhhcCC-CceeehhhhhcCCceEEEEEE
Confidence            555678999999999999999999999999999877643 345568999999999999 999999999999999999999


Q ss_pred             ccCcccHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhhccC
Q psy8006          86 LLTSAVDSKIRESFGSKSESGVQNCLEPSISVFSSLSKFE  125 (126)
Q Consensus        86 ~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~l~~~~  125 (126)
                      |..+|.|++++.+++.+++.+++.+|+||.+|+.|-|+-+
T Consensus       134 YaS~GeLYDYiSer~~LsErEaRhfFRQIvSAVhYCHknr  173 (668)
T KOG0611|consen  134 YASGGELYDYISERGSLSEREARHFFRQIVSAVHYCHKNR  173 (668)
T ss_pred             ecCCccHHHHHHHhccccHHHHHHHHHHHHHHHHHHhhcc
Confidence            9999999999999999999999999999999999999865

>KOG0605|consensus

Probab=99.92  E-value=6.9e-24  Score=142.10  Aligned_cols=123  Identities=16%  Similarity=0.234  Sum_probs=111.6

Q ss_pred             ccccccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCchh-HHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeEE
Q psy8006           3 NIKNIISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDL-KAEILHEVAVLEACRCNSRIVQLHQVFESSHDMI   81 (126)
Q Consensus         3 ~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~-~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~~   81 (126)
                      .+++|..-++||+|+||.||.|+.+.||..+|+|+++++.+-... ...+..|-.+|....+ |+||+++..|.+..++|
T Consensus       139 ~~~DFe~Lk~IgkGAfGeVrLarKk~Tg~iyAmK~LkKS~M~~~~Qv~hV~aERdiL~~~ds-~~vVKLyYsFQD~~~LY  217 (550)
T KOG0605|consen  139 SLDDFELLKVIGKGAFGEVRLARKKDTGEIYAMKILKKSEMLKKNQVEHVRAERDILAEVDS-PWVVKLYYSFQDKEYLY  217 (550)
T ss_pred             CcccchhheeeccccceeEEEEEEccCCcEEeeecccHHHHHhhhhHHHHHHHHHHhhhcCC-CcEEEEEEEecCCCeeE
Confidence            356777888999999999999999999999999999988764432 3458889999999888 99999999999999999


Q ss_pred             EEEeccCcccHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          82 LLLELLTSAVDSKIRESFGSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        82 lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      |||||++||++..++.+.+.+++..+++++.+.+.|++.+|+.|.
T Consensus       218 LiMEylPGGD~mTLL~~~~~L~e~~arfYiaE~vlAI~~iH~~gy  262 (550)
T KOG0605|consen  218 LIMEYLPGGDMMTLLMRKDTLTEDWARFYIAETVLAIESIHQLGY  262 (550)
T ss_pred             EEEEecCCccHHHHHHhcCcCchHHHHHHHHHHHHHHHHHHHcCc
Confidence            999999999999999999999999999999999999999999874

>KOG0616|consensus

Probab=99.91  E-value=5.4e-24  Score=134.34  Aligned_cols=122  Identities=17%  Similarity=0.238  Sum_probs=109.8

Q ss_pred             cccccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCc-hhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeEEE
Q psy8006           4 IKNIISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRST-DLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMIL   82 (126)
Q Consensus         4 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~-~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~~l   82 (126)
                      .++|...+.||.|+||.|...+++.+|..+|+|.++....-. +..+...+|-.+++.+.| |.++.+++.+.+...+|+
T Consensus        43 l~dfe~~~tlGtGSFGrV~LVr~k~~g~yYAmKvL~k~~vVklKQveH~~nEk~vL~~v~~-PFlv~l~~t~~d~~~lym  121 (355)
T KOG0616|consen   43 LQDFERLKTLGTGSFGRVHLVREKHSGNYYAMKVLDKQKVVKLKQVEHTHNEKRVLKAVSH-PFLVKLYGTFKDNSNLYM  121 (355)
T ss_pred             hhhhhheeeeccCccceEEEEEEccCCceeehhhcCHHHHHHHHHHHHHhhHHHHHhhccC-ceeEEEEEeeccCCeEEE
Confidence            456778889999999999999999999999999998764422 223348899999999998 999999999999999999


Q ss_pred             EEeccCcccHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          83 LLELLTSAVDSKIRESFGSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        83 v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      ||||.+||.|..++++.+.|+++.+++++.|++.|++|||..++
T Consensus       122 vmeyv~GGElFS~Lrk~~rF~e~~arFYAAeivlAleylH~~~i  165 (355)
T KOG0616|consen  122 VMEYVPGGELFSYLRKSGRFSEPHARFYAAEIVLALEYLHSLDI  165 (355)
T ss_pred             EEeccCCccHHHHHHhcCCCCchhHHHHHHHHHHHHHHHHhcCe
Confidence            99999999999999998999999999999999999999999875

>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=99.91  E-value=2.8e-23  Score=138.09  Aligned_cols=121  Identities=20%  Similarity=0.251  Sum_probs=107.2

Q ss_pred             ccccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCC-chhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeEEEE
Q psy8006           5 KNIISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRS-TDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILL   83 (126)
Q Consensus         5 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~-~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~~lv   83 (126)
                      ++|...+.||+|+||.||++.+..++..+|+|++...... ......+.+|+.++..++| |||+++++.+..++..|+|
T Consensus         1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~h-~~iv~~~~~~~~~~~~~lv   79 (364)
T cd05599           1 DDFESIKVIGRGAFGEVRLVQKKDTGHIYAMKKLRKSEMLEKEQVAHVRAERDILAEADN-PWVVKLYYSFQDENYLYLI   79 (364)
T ss_pred             CCceEEEEEEecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCC-CCCcceEEEEEcCCeEEEE
Confidence            3677789999999999999999999999999999865332 2233457889999999998 9999999999999999999


Q ss_pred             EeccCcccHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          84 LELLTSAVDSKIRESFGSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        84 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      |||+++++|.+++..++.+++..++.++.|++.|++|||+.++
T Consensus        80 ~E~~~~g~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~lH~~~i  122 (364)
T cd05599          80 MEYLPGGDMMTLLMKKDTFTEEETRFYIAETILAIDSIHKLGY  122 (364)
T ss_pred             ECCCCCcHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence            9999999999998887889999999999999999999999864

Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica

>KOG0597|consensus

Probab=99.91  E-value=3.6e-24  Score=145.04  Aligned_cols=121  Identities=20%  Similarity=0.203  Sum_probs=112.3

Q ss_pred             cccccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeEEEE
Q psy8006           4 IKNIISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILL   83 (126)
Q Consensus         4 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~~lv   83 (126)
                      |++|..-+.+|+|+||.||+|+.+.+...||+|.+.+....++....+.+|+++++.++| |||+..++.|++..+.|+|
T Consensus         1 me~yhv~e~iG~Gsfg~VYKgrrK~t~~~vAik~i~K~gr~~k~l~~l~~ev~i~r~lkH-pniv~m~esfEt~~~~~vV   79 (808)
T KOG0597|consen    1 MEQYHVYEMIGEGSFGRVYKGRRKYTIQVVAIKFIDKSGRNEKELKNLRQEVRILRSLKH-PNIVEMLESFETSAHLWVV   79 (808)
T ss_pred             CcchhHHHHhcCCccceeeecccccceeEEEEEEehhcCCchHHHHHHHHHHHHHHhcCC-cchhhHHHhhcccceEEEE
Confidence            456777789999999999999999999999999999887776667779999999999999 9999999999999999999


Q ss_pred             EeccCcccHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          84 LELLTSAVDSKIRESFGSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        84 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      .||+.+ +|..++..++.++|+.++.+..|+++|+.|||+.+|
T Consensus        80 te~a~g-~L~~il~~d~~lpEe~v~~~a~~LVsaL~yLhs~ri  121 (808)
T KOG0597|consen   80 TEYAVG-DLFTILEQDGKLPEEQVRAIAYDLVSALYYLHSNRI  121 (808)
T ss_pred             ehhhhh-hHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhcCc
Confidence            999999 599999999999999999999999999999999765

>KOG0592|consensus

Probab=99.91  E-value=5.1e-24  Score=143.08  Aligned_cols=124  Identities=19%  Similarity=0.231  Sum_probs=111.9

Q ss_pred             ccccccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCchh-HHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeEE
Q psy8006           3 NIKNIISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDL-KAEILHEVAVLEACRCNSRIVQLHQVFESSHDMI   81 (126)
Q Consensus         3 ~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~-~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~~   81 (126)
                      ...+|.-++.||.|+|++|++|.+..+++.||+|++.+...-.+. ...+.+|-++|..+.+||.|++|+..|.++..+|
T Consensus        71 ~~~DF~Fg~~lGeGSYStV~~A~~~~t~keYAiKVl~K~~Iike~KvkYV~~Ek~~l~~L~~hPgivkLy~TFQD~~sLY  150 (604)
T KOG0592|consen   71 TPNDFKFGKILGEGSYSTVVLAREKATGKEYAIKVLDKRYIIKEKKVKYVTREKEALTQLSGHPGIVKLYFTFQDEESLY  150 (604)
T ss_pred             ChhhcchhheeccccceeEEEeeecCCCceeeHhhhhHHHHHhhcccchhhHHHHHHHHhhCCCCeEEEEEEeecccceE
Confidence            356788899999999999999999999999999999987653332 2347889999999966699999999999999999


Q ss_pred             EEEeccCcccHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          82 LLLELLTSAVDSKIRESFGSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        82 lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      .|+||+++|+|.++++..+.|++..+++++.||+.||+|||..||
T Consensus       151 FvLe~A~nGdll~~i~K~Gsfde~caR~YAAeIldAleylH~~GI  195 (604)
T KOG0592|consen  151 FVLEYAPNGDLLDLIKKYGSFDETCARFYAAEILDALEYLHSNGI  195 (604)
T ss_pred             EEEEecCCCcHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHhcCc
Confidence            999999999999999999999999999999999999999999885

>KOG0659|consensus

Probab=99.91  E-value=1.4e-23  Score=130.81  Aligned_cols=120  Identities=15%  Similarity=0.205  Sum_probs=108.7

Q ss_pred             ccccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeEEEEE
Q psy8006           5 KNIISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLL   84 (126)
Q Consensus         5 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~~lv~   84 (126)
                      ..|...+.+|+|.||.||+|.+..+|+.||||.+......++......||+..++.++| +||+.+.++|...+.+.||+
T Consensus         2 ~rY~~~~~lGEG~~gvVyka~d~~t~~~VAIKKIkl~~~kdGi~~talREIK~Lqel~h-~nIi~LiD~F~~~~~l~lVf   80 (318)
T KOG0659|consen    2 DRYEKLEKLGEGTYGVVYKARDTETGKRVAIKKIKLGNAKDGINRTALREIKLLQELKH-PNIIELIDVFPHKSNLSLVF   80 (318)
T ss_pred             chhhhhhhhcCcceEEEEEEEecCCCcEEEEEEeeccccccCccHHHHHHHHHHHHccC-cchhhhhhhccCCCceEEEE
Confidence            45777889999999999999999999999999999887666656678999999999998 99999999999999999999


Q ss_pred             eccCcccHHHHHHhc-CCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          85 ELLTSAVDSKIRESF-GSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        85 e~~~~~~L~~~~~~~-~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      ||++.+ |...++++ ..++..++..++.+++.+++|+|...+
T Consensus        81 Efm~td-Le~vIkd~~i~l~pa~iK~y~~m~LkGl~y~H~~~I  122 (318)
T KOG0659|consen   81 EFMPTD-LEVVIKDKNIILSPADIKSYMLMTLKGLAYCHSKWI  122 (318)
T ss_pred             Eecccc-HHHHhcccccccCHHHHHHHHHHHHHHHHHHHhhhh
Confidence            999998 88888865 479999999999999999999998653

>KOG0610|consensus

Probab=99.91  E-value=1.3e-23  Score=137.31  Aligned_cols=120  Identities=16%  Similarity=0.090  Sum_probs=107.1

Q ss_pred             cccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCc-hhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeEEEEE
Q psy8006           6 NIISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRST-DLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLL   84 (126)
Q Consensus         6 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~-~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~~lv~   84 (126)
                      ++..-+.||.|.-|+||++....++..+|+|++++..+.. +...+...|-++|..++| |.++++|..++++.+.+++|
T Consensus        78 ~f~llk~LG~GdiG~VyL~~l~~t~~~fAmKVmdK~~l~~rkKl~Ra~tE~eIL~~lDH-PFlPTLYa~fet~~~~cl~m  156 (459)
T KOG0610|consen   78 HFRLLKRLGCGDIGTVYLVELRGTNCLFAMKVMDKESLASRKKLKRAQTEREILSLLDH-PFLPTLYASFETDKYSCLVM  156 (459)
T ss_pred             HHHHHHHcCCCCceeEEEEEecCCCceEEEEEecHHHHhhhhHHHHHHHHHHHHHhcCC-CccchhhheeeccceeEEEE
Confidence            4555678999999999999999999999999999887643 334567888899999999 99999999999999999999


Q ss_pred             eccCcccHHHHHHhc--CCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          85 ELLTSAVDSKIRESF--GSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        85 e~~~~~~L~~~~~~~--~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      |||+||+|..+.++.  ..|++..+++++..++.||+|||-+||
T Consensus       157 eyCpGGdL~~LrqkQp~~~fse~~aRFYaAEvl~ALEYLHmlGi  200 (459)
T KOG0610|consen  157 EYCPGGDLHSLRQKQPGKRFSESAARFYAAEVLLALEYLHMLGI  200 (459)
T ss_pred             ecCCCccHHHHHhhCCCCccchhhHHHHHHHHHHHHHHHHhhce
Confidence            999999999888753  479999999999999999999999886

>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2

Probab=99.91  E-value=9.1e-23  Score=136.55  Aligned_cols=120  Identities=15%  Similarity=0.151  Sum_probs=106.9

Q ss_pred             cccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCC-chhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeEEEEE
Q psy8006           6 NIISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRS-TDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLL   84 (126)
Q Consensus         6 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~-~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~~lv~   84 (126)
                      +|...+.||+|+||.||++.+..++..+|+|.+...... ......+.+|+.++..++| |||+++++.+...+..|+||
T Consensus         2 ~f~~~~~LG~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~l~h-~~iv~l~~~~~~~~~~~lv~   80 (381)
T cd05626           2 MFVKIKTLGIGAFGEVCLACKVDTHALYAMKTLRKKDVLNRNQVAHVKAERDILAEADN-EWVVKLYYSFQDKDNLYFVM   80 (381)
T ss_pred             CceEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhcCC-CCeeeeEEEEecCCEEEEEE
Confidence            567788999999999999999999999999999875432 2334468899999999998 99999999999999999999


Q ss_pred             eccCcccHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          85 ELLTSAVDSKIRESFGSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        85 e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      ||+++++|.+++.+...+++..++.++.|++.|++|||+.++
T Consensus        81 E~~~gg~L~~~l~~~~~~~e~~~~~~~~qi~~aL~~LH~~gi  122 (381)
T cd05626          81 DYIPGGDMMSLLIRMEVFPEVLARFYIAELTLAIESVHKMGF  122 (381)
T ss_pred             ecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCe
Confidence            999999999999877789999999999999999999998764

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po

>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=99.90  E-value=8.2e-23  Score=136.55  Aligned_cols=120  Identities=19%  Similarity=0.251  Sum_probs=106.1

Q ss_pred             cccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCC-chhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeEEEEE
Q psy8006           6 NIISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRS-TDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLL   84 (126)
Q Consensus         6 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~-~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~~lv~   84 (126)
                      +|...+.||+|+||.||++.+..++..+|+|.+...... ......+.+|+.++..++| |||+++++.+..+...|+||
T Consensus         2 ~y~~~~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~h-p~iv~~~~~~~~~~~~~lv~   80 (377)
T cd05629           2 DFHTVKVIGKGAFGEVRLVQKKDTGKIYAMKTLLKSEMFKKDQLAHVKAERDVLAESDS-PWVVSLYYSFQDAQYLYLIM   80 (377)
T ss_pred             CceEeEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHHHHhHHHHHHHHHHHHHHhCCC-CCcceEEEEEEcCCeeEEEE
Confidence            566788999999999999999999999999999764322 2223458889999999998 99999999999999999999


Q ss_pred             eccCcccHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          85 ELLTSAVDSKIRESFGSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        85 e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      ||+++++|.+++.....+++..++.++.|++.|++|||+.++
T Consensus        81 E~~~gg~L~~~l~~~~~~~~~~~~~~~~ql~~aL~~LH~~gi  122 (377)
T cd05629          81 EFLPGGDLMTMLIKYDTFSEDVTRFYMAECVLAIEAVHKLGF  122 (377)
T ss_pred             eCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCe
Confidence            999999999998877789999999999999999999999864

Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of

>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1

Probab=99.90  E-value=1.2e-22  Score=135.16  Aligned_cols=120  Identities=18%  Similarity=0.262  Sum_probs=106.4

Q ss_pred             cccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCC-chhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeEEEEE
Q psy8006           6 NIISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRS-TDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLL   84 (126)
Q Consensus         6 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~-~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~~lv~   84 (126)
                      +|...+.||+|+||.||++.+..++..+|+|++...... ......+.+|+.++..++| |+++++++.+......|+||
T Consensus         2 ~y~~~~~LG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~~~~-~~iv~~~~~~~~~~~~~lv~   80 (363)
T cd05628           2 DFESLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVGHIRAERDILVEADS-LWVVKMFYSFQDKLNLYLIM   80 (363)
T ss_pred             CceEeEEEEeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHhCCC-CCcceEEEEEecCCeEEEEE
Confidence            577788999999999999999999999999999865332 2223457889999999998 99999999999999999999


Q ss_pred             eccCcccHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          85 ELLTSAVDSKIRESFGSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        85 e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      ||+++++|.+++.....+++..++.++.|++.|++|||+.++
T Consensus        81 E~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~lH~~gi  122 (363)
T cd05628          81 EFLPGGDMMTLLMKKDTLTEEETQFYIAETVLAIDSIHQLGF  122 (363)
T ss_pred             cCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCe
Confidence            999999999999877889999999999999999999999864

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus

>PTZ00263 protein kinase A catalytic subunit; Provisional

Probab=99.90  E-value=1.3e-22  Score=133.45  Aligned_cols=123  Identities=16%  Similarity=0.198  Sum_probs=108.6

Q ss_pred             ccccccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCC-chhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeEE
Q psy8006           3 NIKNIISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRS-TDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMI   81 (126)
Q Consensus         3 ~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~-~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~~   81 (126)
                      .+.+|...+.||+|+||.||+|.+..++..+|+|.+...... ......+.+|+.++..++| |||+++++.+..++..|
T Consensus        16 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~h-p~iv~~~~~~~~~~~~~   94 (329)
T PTZ00263         16 KLSDFEMGETLGTGSFGRVRIAKHKGTGEYYAIKCLKKREILKMKQVQHVAQEKSILMELSH-PFIVNMMCSFQDENRVY   94 (329)
T ss_pred             CchheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCC-CCCCcEEEEEEcCCEEE
Confidence            356788889999999999999999999999999999865332 2223458899999999998 99999999999999999


Q ss_pred             EEEeccCcccHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          82 LLLELLTSAVDSKIRESFGSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        82 lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      ++|||+.+++|.+++.....+++..+..++.|++.|++|||+.++
T Consensus        95 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~i  139 (329)
T PTZ00263         95 FLLEFVVGGELFTHLRKAGRFPNDVAKFYHAELVLAFEYLHSKDI  139 (329)
T ss_pred             EEEcCCCCChHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence            999999999999998887889999999999999999999998764

>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor

Probab=99.90  E-value=1.3e-22  Score=135.54  Aligned_cols=120  Identities=16%  Similarity=0.197  Sum_probs=106.1

Q ss_pred             cccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCC-chhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeEEEEE
Q psy8006           6 NIISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRS-TDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLL   84 (126)
Q Consensus         6 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~-~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~~lv~   84 (126)
                      +|...+.||+|+||.||++.+..++..+|+|.+...... ......+.+|+.++..++| |||+++++.+..++..|+||
T Consensus         2 ~y~~~~~lG~G~~g~V~~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~h-~~iv~~~~~~~~~~~~~lv~   80 (376)
T cd05598           2 MFVKIKTIGIGAFGEVCLVRKVDTNALYAMKTLRKADVLMRNQAAHVKAERDILAEADN-EWVVKLYYSFQDKDNLYFVM   80 (376)
T ss_pred             CceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEcHHHHHhhhhHHHHHHHHHHHHhCCC-CCcceEEEEEEcCCEEEEEE
Confidence            567788999999999999999999999999999764321 1223458899999999999 99999999999999999999


Q ss_pred             eccCcccHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          85 ELLTSAVDSKIRESFGSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        85 e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      ||+++++|.+++...+.+++..+..++.|++.|++|||+.++
T Consensus        81 E~~~~g~L~~~i~~~~~~~~~~~~~~~~qi~~al~~lH~~~i  122 (376)
T cd05598          81 DYIPGGDMMSLLIRLGIFEEDLARFYIAELTCAIESVHKMGF  122 (376)
T ss_pred             eCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence            999999999999887889999999999999999999998764

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.

>KOG0661|consensus

Probab=99.90  E-value=3.5e-24  Score=142.02  Aligned_cols=121  Identities=17%  Similarity=0.203  Sum_probs=106.0

Q ss_pred             ccccccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCC-eEE
Q psy8006           3 NIKNIISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSH-DMI   81 (126)
Q Consensus         3 ~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~-~~~   81 (126)
                      .++.|...+.||.|+||.||+|....++..||||.+......-+ .-.-+||+..+++++.||||+++.+.+.+.+ .+|
T Consensus         8 ~m~RY~~i~klGDGTfGsV~la~~~~~~~~VAIK~MK~Kf~s~e-e~~nLREvksL~kln~hpniikL~Evi~d~~~~L~   86 (538)
T KOG0661|consen    8 FMDRYTVIRKLGDGTFGSVYLAKSKETGELVAIKKMKKKFYSWE-ECMNLREVKSLRKLNPHPNIIKLKEVIRDNDRILY   86 (538)
T ss_pred             HHHHHHHHHHhcCCcceeEEEeeecCCCceeeHHHHHhhhccHH-HHHHHHHHHHHHhcCCCCcchhhHHHhhccCceEe
Confidence            35678888999999999999999999999999999987765311 1135799999999994499999999998887 899


Q ss_pred             EEEeccCcccHHHHHHhc-CCCCHHHHHHHHHHHHHHHHhhhccC
Q psy8006          82 LLLELLTSAVDSKIRESF-GSKSESGVQNCLEPSISVFSSLSKFE  125 (126)
Q Consensus        82 lv~e~~~~~~L~~~~~~~-~~~~~~~~~~~~~qi~~~l~~l~~~~  125 (126)
                      +|||||+.. |+++++.+ ..|++..++.++.||+++|+|+|+-|
T Consensus        87 fVfE~Md~N-LYqLmK~R~r~fse~~irnim~QilqGL~hiHk~G  130 (538)
T KOG0661|consen   87 FVFEFMDCN-LYQLMKDRNRLFSESDIRNIMYQILQGLAHIHKHG  130 (538)
T ss_pred             eeHHhhhhh-HHHHHhhcCCcCCHHHHHHHHHHHHHHHHHHHhcC
Confidence            999999999 99999865 57999999999999999999999976

>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1

Probab=99.90  E-value=2.4e-22  Score=134.51  Aligned_cols=120  Identities=17%  Similarity=0.197  Sum_probs=106.0

Q ss_pred             cccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCC-chhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeEEEEE
Q psy8006           6 NIISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRS-TDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLL   84 (126)
Q Consensus         6 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~-~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~~lv~   84 (126)
                      .|...+.||+|+||.||++.+..++..+|+|.+...... ......+.+|+.++..++| |||+++++.+..++..|+||
T Consensus         2 ~f~~~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~~~h-~~iv~~~~~~~~~~~~~lv~   80 (382)
T cd05625           2 MFVKIKTLGIGAFGEVCLARKVDTKALYAMKTLRKKDVLLRNQVAHVKAERDILAEADN-EWVVRLYYSFQDKDNLYFVM   80 (382)
T ss_pred             CcEEEEEEEeCCCEEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhCCC-CcCCeEEEEEEeCCEEEEEE
Confidence            466788999999999999999999999999999865322 2223458899999999998 99999999999999999999


Q ss_pred             eccCcccHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          85 ELLTSAVDSKIRESFGSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        85 e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      ||+++|+|.+++.+...+++..++.++.|++.|++|||+.++
T Consensus        81 E~~~gg~L~~~l~~~~~~~e~~~~~~~~qi~~al~~lH~~~i  122 (382)
T cd05625          81 DYIPGGDMMSLLIRMGIFPEDLARFYIAELTCAVESVHKMGF  122 (382)
T ss_pred             eCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCe
Confidence            999999999988877789999999999999999999999864

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an

>KOG0663|consensus

Probab=99.90  E-value=4.2e-23  Score=132.32  Aligned_cols=122  Identities=17%  Similarity=0.237  Sum_probs=106.0

Q ss_pred             cccccccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeC--Ce
Q psy8006           2 NNIKNIISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESS--HD   79 (126)
Q Consensus         2 ~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~--~~   79 (126)
                      +++++|..-+.|++|+||.||+|++.+++..||+|.++-..-..+..-..+||+.++.+++| ||||.+.+++...  +.
T Consensus        73 rsv~efe~lnrI~EGtyGiVYRakdk~t~eIVALKr~kmekek~GFPItsLREIniLl~~~H-~NIV~vkEVVvG~~~d~  151 (419)
T KOG0663|consen   73 RSVEEFEKLNRIEEGTYGVVYRAKDKKTDEIVALKRLKMEKEKEGFPITSLREINILLKARH-PNIVEVKEVVVGSNMDK  151 (419)
T ss_pred             ccHHHHHHHhhcccCcceeEEEeccCCcceeEEeeecccccccCCCcchhHHHHHHHHhcCC-CCeeeeEEEEeccccce
Confidence            46778888889999999999999999999999999998765434444468899999999998 9999999998744  47


Q ss_pred             EEEEEeccCcccHHHHHHhc-CCCCHHHHHHHHHHHHHHHHhhhccC
Q psy8006          80 MILLLELLTSAVDSKIRESF-GSKSESGVQNCLEPSISVFSSLSKFE  125 (126)
Q Consensus        80 ~~lv~e~~~~~~L~~~~~~~-~~~~~~~~~~~~~qi~~~l~~l~~~~  125 (126)
                      +|+||||++.+ |..++..- .+|++.++.-++.|++.|++|||+.-
T Consensus       152 iy~VMe~~EhD-Lksl~d~m~q~F~~~evK~L~~QlL~glk~lH~~w  197 (419)
T KOG0663|consen  152 IYIVMEYVEHD-LKSLMETMKQPFLPGEVKTLMLQLLRGLKHLHDNW  197 (419)
T ss_pred             eeeeHHHHHhh-HHHHHHhccCCCchHHHHHHHHHHHHHHHHHhhce
Confidence            99999999999 88888763 47999999999999999999999864

>KOG0588|consensus

Probab=99.90  E-value=4.4e-23  Score=141.44  Aligned_cols=124  Identities=19%  Similarity=0.214  Sum_probs=113.5

Q ss_pred             cccccccceeeccCccceeEEEEEEccCCcEEEEEEeecC-CCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeE
Q psy8006           2 NNIKNIISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKK-RRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDM   80 (126)
Q Consensus         2 ~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~-~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~   80 (126)
                      |++..+..++.||.|+.|.|..|++..||..+|||++... ...+.......+|+.+|+-+.| ||++.+++.+++..++
T Consensus         9 ~tiGpwkLgkTLG~Gstg~vrlakh~~TGqlaaiKii~k~~~~s~s~~~~IerEIviMkLi~H-pnVl~LydVwe~~~~l   87 (786)
T KOG0588|consen    9 NTIGPWKLGKTLGKGSTGCVRLAKHAETGQLAAIKIIPKRSELSSSQPAGIEREIVIMKLIEH-PNVLRLYDVWENKQHL   87 (786)
T ss_pred             ccccceeccccccCCCCceehhhhcccccceeEEEeeccccccccccccchhhhhHHHHHhcC-CCeeeeeeeeccCceE
Confidence            5666777899999999999999999999999999999987 4444445568999999999999 9999999999999999


Q ss_pred             EEEEeccCcccHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          81 ILLLELLTSAVDSKIRESFGSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        81 ~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      |+|.||+++|.|++++-+++++++.++..+++||+.|+.|-|.+.+
T Consensus        88 ylvlEyv~gGELFdylv~kG~l~e~eaa~ff~QIi~gv~yCH~~~i  133 (786)
T KOG0588|consen   88 YLVLEYVPGGELFDYLVRKGPLPEREAAHFFRQILDGVSYCHAFNI  133 (786)
T ss_pred             EEEEEecCCchhHHHHHhhCCCCCHHHHHHHHHHHHHHHHHhhhcc
Confidence            9999999999999999999999999999999999999999998864

>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases

Probab=99.89  E-value=1.5e-22  Score=131.12  Aligned_cols=120  Identities=17%  Similarity=0.131  Sum_probs=106.0

Q ss_pred             cccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCc-hhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeEEEEE
Q psy8006           6 NIISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRST-DLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLL   84 (126)
Q Consensus         6 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~-~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~~lv~   84 (126)
                      +|...+.||+|+||.||++.+..++..+|+|.+....... .....+.+|+.+++.++| |||+++++.+.+.+..+++|
T Consensus         2 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~h-p~iv~~~~~~~~~~~~~lv~   80 (291)
T cd05612           2 DLERIKTVGTGTFGRVHLVRDRISEHYYALKVMAIPEVIRLKQEQHVHNEKRVLKEVSH-PFIIRLFWTEHDQRFLYMLM   80 (291)
T ss_pred             CceeeeeeecCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhhHHHHHHHHHHHHHHhCCC-CcHhhhHhhhccCCeEEEEE
Confidence            5677889999999999999999999999999997643321 223458899999999999 99999999999999999999


Q ss_pred             eccCcccHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          85 ELLTSAVDSKIRESFGSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        85 e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      ||+++++|.+++...+.+++..+..++.|++.|++|||+.++
T Consensus        81 e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i  122 (291)
T cd05612          81 EYVPGGELFSYLRNSGRFSNSTGLFYASEIVCALEYLHSKEI  122 (291)
T ss_pred             eCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence            999999999999887889999999999999999999998764

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt

>KOG0032|consensus

Probab=99.89  E-value=4.6e-22  Score=132.47  Aligned_cols=120  Identities=20%  Similarity=0.280  Sum_probs=106.4

Q ss_pred             cccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCc-hhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeEEEEE
Q psy8006           6 NIISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRST-DLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLL   84 (126)
Q Consensus         6 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~-~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~~lv~   84 (126)
                      .|...+.||+|.||.||.|.++.+|..+|+|.+.+..... .....+.+|+.+|++++.|||++.+++.+++....++||
T Consensus        36 ~Y~l~~~lG~G~Fg~v~~~~~~~tg~~~A~K~i~k~~~~~~~~~~~v~~Ev~il~~l~~hpniv~l~~~~e~~~~~~lvm  115 (382)
T KOG0032|consen   36 KYELGRELGRGQFGVVYLCREKSTGKEVACKVIPKRKLRGKEDREDVRREVAILQQLSGHPNIVQLKDAFEDPDSVYLVM  115 (382)
T ss_pred             cEEehhhhCCCCceEEEEEEecCCCceeEEEEeehhhccccccHHHHHHHHHHHHhccCCCCEEEEEEEEEcCCeEEEEE
Confidence            3556789999999999999999999999999999876532 234569999999999994499999999999999999999


Q ss_pred             eccCcccHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          85 ELLTSAVDSKIRESFGSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        85 e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      |++.||.|.+.+... .+++.++..+++|++.+++|+|..++
T Consensus       116 EL~~GGeLfd~i~~~-~~sE~da~~~~~~il~av~~lH~~gv  156 (382)
T KOG0032|consen  116 ELCEGGELFDRIVKK-HYSERDAAGIIRQILEAVKYLHSLGV  156 (382)
T ss_pred             EecCCchHHHHHHHc-cCCHHHHHHHHHHHHHHHHHHHhCCc
Confidence            999999998887765 49999999999999999999999874

>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases

Probab=99.89  E-value=4.3e-22  Score=131.12  Aligned_cols=120  Identities=16%  Similarity=0.204  Sum_probs=106.4

Q ss_pred             cccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCc-hhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeEEEEE
Q psy8006           6 NIISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRST-DLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLL   84 (126)
Q Consensus         6 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~-~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~~lv~   84 (126)
                      +|...+.||+|+||.||+|.+..++..+|+|.+....... .....+.+|+.++..++| |||+++++.+..++..|+||
T Consensus         2 ~y~~~~~ig~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~h-~~iv~~~~~~~~~~~~~lv~   80 (333)
T cd05600           2 DFQILTQVGQGGYGQVFLAKKKDTGEIVALKRMKKSLLFKLNEVRHVLTERDILTTTKS-EWLVKLLYAFQDDEYLYLAM   80 (333)
T ss_pred             CcEEEEEEeecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhCCC-CCCccEEEEEEcCCEEEEEE
Confidence            5677889999999999999999999999999998654322 223458899999999998 99999999999999999999


Q ss_pred             eccCcccHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          85 ELLTSAVDSKIRESFGSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        85 e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      ||+++++|.+++.....+++..++.++.|++.|+.|||+.++
T Consensus        81 e~~~g~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i  122 (333)
T cd05600          81 EYVPGGDFRTLLNNLGVLSEDHARFYMAEMFEAVDALHELGY  122 (333)
T ss_pred             eCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCc
Confidence            999999999999887889999999999999999999998764

Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.

>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B

Probab=99.89  E-value=4.4e-22  Score=130.68  Aligned_cols=115  Identities=20%  Similarity=0.199  Sum_probs=102.0

Q ss_pred             eeccCccceeEEEEEEccCCcEEEEEEeecCCCC-chhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeEEEEEeccCc
Q psy8006          11 IINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRS-TDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLLELLTS   89 (126)
Q Consensus        11 ~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~-~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~~lv~e~~~~   89 (126)
                      +.||+|+||.||++.+..++..+|+|.+...... ......+.+|+.++..++| ||++++++.+...+..|+||||+++
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h-p~i~~~~~~~~~~~~~~lv~e~~~~   79 (323)
T cd05571           1 KLLGKGTFGKVILVREKATGKYYAMKILKKEVIIAKDEVAHTLTESRVLQNTRH-PFLTALKYSFQTHDRLCFVMEYANG   79 (323)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCC-CCCCCEEEEEEcCCEEEEEEeCCCC
Confidence            4689999999999999999999999999865432 2233457889999999998 9999999999999999999999999


Q ss_pred             ccHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          90 AVDSKIRESFGSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        90 ~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      ++|.+++.....+++..+..++.|++.|++|||+.++
T Consensus        80 ~~L~~~l~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i  116 (323)
T cd05571          80 GELFFHLSRERVFSEDRARFYGAEIVSALGYLHSCDV  116 (323)
T ss_pred             CcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCe
Confidence            9999888877889999999999999999999999864

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be

>KOG0194|consensus

Probab=99.89  E-value=3.7e-22  Score=134.66  Aligned_cols=120  Identities=13%  Similarity=0.063  Sum_probs=103.1

Q ss_pred             cccceeeccCccceeEEEEEEccCCc---E-EEEEEeecCC-CCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeE
Q psy8006           6 NIISSIINDMGKYATVRRCRDRKNGT---Q-YAAKFLRKKR-RSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDM   80 (126)
Q Consensus         6 ~~~~~~~lg~g~~~~v~~~~~~~~~~---~-~aiK~~~~~~-~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~   80 (126)
                      ++...+.||+|+||.||.|.....+.   . ||+|....+. .......++++|.++|++++| ||||+++|+......+
T Consensus       158 ~v~l~kkLGeGaFGeV~~G~l~~~~~~~~~~VAvK~~k~~~~~~~~~~~e~m~EArvMr~l~H-~NVVr~yGVa~~~~Pl  236 (474)
T KOG0194|consen  158 DIELGKKLGEGAFGEVFKGKLKLKNGFKVVPVAVKTTKGSSELTKEQIKEFMKEARVMRQLNH-PNVVRFYGVAVLEEPL  236 (474)
T ss_pred             CccccceeecccccEEEEEEEEecCCceeeeeEEEeecccccccHHHHHHHHHHHHHHHhCCC-CCEEEEEEEEcCCCcc
Confidence            44556899999999999998764422   3 8999988633 445556679999999999999 9999999999999999


Q ss_pred             EEEEeccCcccHHHHHHhcC-CCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          81 ILLLELLTSAVDSKIRESFG-SKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        81 ~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      +||||+|.+|+|.++++..+ .++..+-..++.+.+.||+|||+..+
T Consensus       237 ~ivmEl~~gGsL~~~L~k~~~~v~~~ek~~~~~~AA~Gl~YLh~k~~  283 (474)
T KOG0194|consen  237 MLVMELCNGGSLDDYLKKNKKSLPTLEKLRFCYDAARGLEYLHSKNC  283 (474)
T ss_pred             EEEEEecCCCcHHHHHHhCCCCCCHHHHHHHHHHHHhHHHHHHHCCC
Confidence            99999999999999998765 59999999999999999999998753

>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C

Probab=99.89  E-value=6.6e-22  Score=130.14  Aligned_cols=116  Identities=16%  Similarity=0.149  Sum_probs=101.5

Q ss_pred             eeccCccceeEEEEEEccCCcEEEEEEeecCCCCc-hhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeEEEEEeccCc
Q psy8006          11 IINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRST-DLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLLELLTS   89 (126)
Q Consensus        11 ~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~-~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~~lv~e~~~~   89 (126)
                      ++||+|+||.||++.+..++..+|+|.+....... .....+.+|..++..+.+||||+++++.+...+..|++|||+++
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~il~~~~~hp~Iv~~~~~~~~~~~~~lv~e~~~~   80 (329)
T cd05588           1 RVIGRGSYAKVLLVELKKTRRIYAMKVIKKELVNDDEDIDWVQTEKHVFETASNHPFLVGLHSCFQTESRLFFVIEFVSG   80 (329)
T ss_pred             CeEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCCCCceEEEEEcCCEEEEEEeCCCC
Confidence            46899999999999999999999999998754322 22345788999999986459999999999999999999999999


Q ss_pred             ccHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          90 AVDSKIRESFGSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        90 ~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      ++|..++...+.+++..+..++.|++.|++|||+.++
T Consensus        81 g~L~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i  117 (329)
T cd05588          81 GDLMFHMQRQRKLPEEHARFYSAEISLALNFLHERGI  117 (329)
T ss_pred             CCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence            9998888777789999999999999999999998764

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl

>KOG4236|consensus

Probab=99.89  E-value=1.6e-22  Score=136.57  Aligned_cols=121  Identities=22%  Similarity=0.279  Sum_probs=108.3

Q ss_pred             ccccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeEEEEE
Q psy8006           5 KNIISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLL   84 (126)
Q Consensus         5 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~~lv~   84 (126)
                      ..++.+++||+|.||.||-|+++++|+.||||+|++...+.+....+.+|+.+++++.| |.||.+.-.+++++.+++||
T Consensus       564 YQif~devLGSGQFG~VYgg~hRktGrdVAvKvIdKlrFp~kqesqlR~EVaILq~l~H-PGiV~le~M~ET~ervFVVM  642 (888)
T KOG4236|consen  564 YQIFADEVLGSGQFGTVYGGKHRKTGRDVAVKVIDKLRFPTKQESQLRNEVAILQNLHH-PGIVNLECMFETPERVFVVM  642 (888)
T ss_pred             HHhhhHhhccCCcceeeecceecccCceeeeeeeecccCCCchHHHHHHHHHHHHhcCC-CCeeEEEEeecCCceEEEEe
Confidence            34667899999999999999999999999999999987766555579999999999999 99999999999999999999


Q ss_pred             eccCcccHHHHHH-hcCCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          85 ELLTSAVDSKIRE-SFGSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        85 e~~~~~~L~~~~~-~~~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      |-+.|+-|.-++. +++.++++...+++.||+.|+.|||-..|
T Consensus       643 EKl~GDMLEMILSsEkgRL~er~TkFlvtQIL~ALr~LH~knI  685 (888)
T KOG4236|consen  643 EKLHGDMLEMILSSEKGRLPERITKFLVTQILVALRYLHFKNI  685 (888)
T ss_pred             hhhcchHHHHHHHhhcccchHHHHHHHHHHHHHHHHHhhhcce
Confidence            9999986666654 46789999999999999999999998764

>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta

Probab=99.89  E-value=8.6e-22  Score=129.32  Aligned_cols=115  Identities=19%  Similarity=0.198  Sum_probs=101.5

Q ss_pred             eeccCccceeEEEEEEccCCcEEEEEEeecCCC-CchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeEEEEEeccCc
Q psy8006          11 IINDMGKYATVRRCRDRKNGTQYAAKFLRKKRR-STDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLLELLTS   89 (126)
Q Consensus        11 ~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~-~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~~lv~e~~~~   89 (126)
                      +.||+|+||.||++.+..++..+|+|.+..... .......+.+|+.++..++| ||++++++.+...+..|+||||+++
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~h-p~i~~~~~~~~~~~~~~lv~E~~~~   79 (323)
T cd05595           1 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRH-PFLTALKYAFQTHDRLCFVMEYANG   79 (323)
T ss_pred             CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCC-CCCcceeeEEecCCEEEEEEeCCCC
Confidence            468999999999999999999999999986533 22233457789999999998 9999999999999999999999999


Q ss_pred             ccHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          90 AVDSKIRESFGSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        90 ~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      ++|..++.....+++..+..++.|++.|++|||+.++
T Consensus        80 ~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~i  116 (323)
T cd05595          80 GELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDV  116 (323)
T ss_pred             CcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence            9998888877789999999999999999999998764

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in

>KOG0582|consensus

Probab=99.89  E-value=7.4e-22  Score=130.39  Aligned_cols=121  Identities=16%  Similarity=0.191  Sum_probs=110.2

Q ss_pred             ccccccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeEEE
Q psy8006           3 NIKNIISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMIL   82 (126)
Q Consensus         3 ~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~~l   82 (126)
                      |...|...++||.|..+.||+|...+++..||||+++....... ...+.+|+..|..++| |||++++..|..+..+|+
T Consensus        24 n~~~YeL~e~IG~G~sa~V~~A~c~p~~e~VAIK~inLEkc~~~-ld~l~kE~~~msl~~H-PNIv~~~~sFvv~~~LWv  101 (516)
T KOG0582|consen   24 NAKDYELQEVIGVGASAVVYLARCIPTNEVVAIKIINLEKCNND-LDALRKEVQTMSLIDH-PNIVTYHCSFVVDSELWV  101 (516)
T ss_pred             CccceeEEEEEeccceeEeeeeeecccCCEEEEEEeehhhhhhh-HHHHHHHHHHhhhcCC-CCcceEEEEEEecceeEE
Confidence            44567788999999999999999999999999999998876544 5679999999999999 999999999999999999


Q ss_pred             EEeccCcccHHHHHHhcC--CCCHHHHHHHHHHHHHHHHhhhccC
Q psy8006          83 LLELLTSAVDSKIRESFG--SKSESGVQNCLEPSISVFSSLSKFE  125 (126)
Q Consensus        83 v~e~~~~~~L~~~~~~~~--~~~~~~~~~~~~qi~~~l~~l~~~~  125 (126)
                      ||.||.+|++.++++...  .+.|..+..+.++++.||.|||..|
T Consensus       102 VmpfMa~GS~ldIik~~~~~Gl~E~~Ia~iLre~LkaL~YLH~~G  146 (516)
T KOG0582|consen  102 VMPFMAGGSLLDIIKTYYPDGLEEASIATILREVLKALDYLHQNG  146 (516)
T ss_pred             eehhhcCCcHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHhcC
Confidence            999999999999998743  5999999999999999999999876

>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2

Probab=99.89  E-value=9.4e-22  Score=130.76  Aligned_cols=120  Identities=19%  Similarity=0.285  Sum_probs=106.1

Q ss_pred             cccceeeccCccceeEEEEEEccCCcEEEEEEeecCCC-CchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeEEEEE
Q psy8006           6 NIISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRR-STDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLL   84 (126)
Q Consensus         6 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~-~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~~lv~   84 (126)
                      +|...+.||+|+||.||.+.+..++..+|+|.++.... .......+.+|+.++..++| |+++++++.+...+..|+||
T Consensus         2 ~f~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~-~~iv~~~~~~~~~~~~~lv~   80 (360)
T cd05627           2 DFESLKVIGRGAFGEVRLVQKKDTGHIYAMKILRKADMLEKEQVAHIRAERDILVEADG-AWVVKMFYSFQDKRNLYLIM   80 (360)
T ss_pred             CceEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCC-CCEeeEEEEEEcCCEEEEEE
Confidence            56677899999999999999999999999999986432 22234457889999999998 99999999999999999999


Q ss_pred             eccCcccHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          85 ELLTSAVDSKIRESFGSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        85 e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      ||+++++|.+++.....+++..++.++.|++.|++|||+.++
T Consensus        81 E~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~~L~~lH~~gi  122 (360)
T cd05627          81 EFLPGGDMMTLLMKKDTLSEEATQFYIAETVLAIDAIHQLGF  122 (360)
T ss_pred             eCCCCccHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence            999999999999877889999999999999999999999764

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul

>KOG0198|consensus

Probab=99.89  E-value=6.3e-22  Score=128.09  Aligned_cols=120  Identities=18%  Similarity=0.205  Sum_probs=104.1

Q ss_pred             cccccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCC--eEE
Q psy8006           4 IKNIISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSH--DMI   81 (126)
Q Consensus         4 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~--~~~   81 (126)
                      ..+....+.||+|+||.||.+.+.++|...|+|.+.......  .+.+.+|+.+|.+++| |+||++++......  .++
T Consensus        16 ~~~~~~~~~lG~Gs~G~V~l~~~~~~g~~~AvK~v~~~~~~~--~~~l~~Ei~iL~~l~~-p~IV~~~G~~~~~~~~~~~   92 (313)
T KOG0198|consen   16 ISNWSKGKLLGRGSFGSVYLATNKKTGELMAVKSVELEDSPT--SESLEREIRILSRLNH-PNIVQYYGSSSSRENDEYN   92 (313)
T ss_pred             cchhhhhccccCccceEEEEEEecCCCcceeeeeeecccchh--HHHHHHHHHHHHhCCC-CCEEeeCCccccccCeeeE
Confidence            345677889999999999999999999999999998763221  4468999999999997 99999999754444  689


Q ss_pred             EEEeccCcccHHHHHHhcC-CCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          82 LLLELLTSAVDSKIRESFG-SKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        82 lv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      ++|||+++|+|.+++++.+ .+++..++.+.+|++++++|||..++
T Consensus        93 i~mEy~~~GsL~~~~~~~g~~l~E~~v~~ytr~iL~GL~ylHs~g~  138 (313)
T KOG0198|consen   93 IFMEYAPGGSLSDLIKRYGGKLPEPLVRRYTRQILEGLAYLHSKGI  138 (313)
T ss_pred             eeeeccCCCcHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCE
Confidence            9999999999999998766 79999999999999999999998763

>KOG0586|consensus

Probab=99.89  E-value=6.1e-22  Score=134.50  Aligned_cols=123  Identities=18%  Similarity=0.227  Sum_probs=113.9

Q ss_pred             cccccccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeEE
Q psy8006           2 NNIKNIISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMI   81 (126)
Q Consensus         2 ~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~~   81 (126)
                      |.+.+|...+.||+|.|+.|..+.+..++..||+|.+++........+.+.+|+++|..+.| ||||++++..+.+..+|
T Consensus        53 ~~vg~y~i~~tig~g~f~~V~La~~~~t~~~VaiK~idkt~ln~~~~~k~~rev~imk~l~H-PnIvkl~~v~~t~~~ly  131 (596)
T KOG0586|consen   53 NSVGLYVIIKTIGKGNFAKVKLARHILTGTEVAIKIIDKTQLNPSKRQKLGREVDIMKSLNH-PNIVKLFSVIETEATLY  131 (596)
T ss_pred             ccccceeeeeeeccceeEEEEeeEecCCCceEEEEEehhcccChHHHHHHHHHHHHHHhcCC-cceeeeeeeeeecceeE
Confidence            34567888899999999999999999999999999999988877766779999999999999 99999999999999999


Q ss_pred             EEEeccCcccHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhhccC
Q psy8006          82 LLLELLTSAVDSKIRESFGSKSESGVQNCLEPSISVFSSLSKFE  125 (126)
Q Consensus        82 lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~l~~~~  125 (126)
                      +||||+.+|.+++++...+...+..++.+++|+++|++|+|...
T Consensus       132 lV~eya~~ge~~~yl~~~gr~~e~~ar~~F~q~vsaveYcH~k~  175 (596)
T KOG0586|consen  132 LVMEYASGGELFDYLVKHGRMKEKEARAKFRQIVSAVEYCHSKN  175 (596)
T ss_pred             EEEEeccCchhHHHHHhcccchhhhhhhhhHHHHHHHHHHhhcc
Confidence            99999999999999988888899999999999999999999864

>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma

Probab=99.89  E-value=1.3e-21  Score=128.66  Aligned_cols=115  Identities=20%  Similarity=0.190  Sum_probs=101.7

Q ss_pred             eeccCccceeEEEEEEccCCcEEEEEEeecCCCC-chhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeEEEEEeccCc
Q psy8006          11 IINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRS-TDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLLELLTS   89 (126)
Q Consensus        11 ~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~-~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~~lv~e~~~~   89 (126)
                      +.||+|+||.||++.+..++..+|+|.+...... ......+.+|+.+++.++| ||++++.+.+...+..++||||+++
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~h-p~iv~~~~~~~~~~~~~lv~Ey~~~   79 (328)
T cd05593           1 KLLGKGTFGKVILVREKASGKYYAMKILKKEVIIAKDEVAHTLTESRVLKNTRH-PFLTSLKYSFQTKDRLCFVMEYVNG   79 (328)
T ss_pred             CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCC-CCCcceEEEEEcCCEEEEEEeCCCC
Confidence            4689999999999999999999999999865432 2234468889999999998 9999999999999999999999999


Q ss_pred             ccHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          90 AVDSKIRESFGSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        90 ~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      ++|...+.....+++..+..++.|++.|++|||+.++
T Consensus        80 g~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~LH~~~i  116 (328)
T cd05593          80 GELFFHLSRERVFSEDRTRFYGAEIVSALDYLHSGKI  116 (328)
T ss_pred             CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCe
Confidence            9998888877789999999999999999999999764

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate

>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases

Probab=99.88  E-value=1.3e-21  Score=127.92  Aligned_cols=113  Identities=24%  Similarity=0.292  Sum_probs=100.3

Q ss_pred             ccCccceeEEEEEEccCCcEEEEEEeecCCC-CchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeEEEEEeccCccc
Q psy8006          13 NDMGKYATVRRCRDRKNGTQYAAKFLRKKRR-STDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLLELLTSAV   91 (126)
Q Consensus        13 lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~-~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~~lv~e~~~~~~   91 (126)
                      ||+|+||.||++.+..++..+|+|.+..... .......+.+|+.++..++| |||+++++.+..++..|+||||+++++
T Consensus         1 lg~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~~l~~l~h-~~iv~~~~~~~~~~~~~lv~e~~~~g~   79 (312)
T cd05585           1 IGKGSFGKVMQVRKRDTQRIYALKTIRKAHIVSRSEVTHTLAERTVLAQVNC-PFIVPLKFSFQSPEKLYLVLAFINGGE   79 (312)
T ss_pred             CCcCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCC-CcEeceeeEEecCCeEEEEEcCCCCCc
Confidence            6999999999999999999999999986533 22233457889999999998 999999999999999999999999999


Q ss_pred             HHHHHHhcCCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          92 DSKIRESFGSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        92 L~~~~~~~~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      |.+++.....+++..+..++.|++.|++|||+.++
T Consensus        80 L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i  114 (312)
T cd05585          80 LFHHLQREGRFDLSRARFYTAELLCALENLHKFNV  114 (312)
T ss_pred             HHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCe
Confidence            99999877889999999999999999999998764

Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl

>KOG0192|consensus

Probab=99.88  E-value=1e-21  Score=129.94  Aligned_cols=116  Identities=15%  Similarity=0.082  Sum_probs=101.7

Q ss_pred             ccceeeccCccceeEEEEEEccCCcE-EEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCC-eEEEEE
Q psy8006           7 IISSIINDMGKYATVRRCRDRKNGTQ-YAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSH-DMILLL   84 (126)
Q Consensus         7 ~~~~~~lg~g~~~~v~~~~~~~~~~~-~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~-~~~lv~   84 (126)
                      +...+.+|+|+||.||++..+.  .. +|+|.+.....+......+.+|+.++.+++| ||||++++++..+. ...|||
T Consensus        43 l~~~~~iG~G~~g~V~~~~~~g--~~~vavK~~~~~~~~~~~~~~f~~E~~il~~l~H-pNIV~f~G~~~~~~~~~~iVt  119 (362)
T KOG0192|consen   43 LPIEEVLGSGSFGTVYKGKWRG--TDVVAVKIISDPDFDDESRKAFRREASLLSRLRH-PNIVQFYGACTSPPGSLCIVT  119 (362)
T ss_pred             hhhhhhcccCCceeEEEEEeCC--ceeEEEEEecchhcChHHHHHHHHHHHHHHhCCC-CCeeeEEEEEcCCCCceEEEE
Confidence            3445669999999999998864  44 9999999876655545679999999999999 99999999998887 799999


Q ss_pred             eccCcccHHHHHHh--cCCCCHHHHHHHHHHHHHHHHhhhccC
Q psy8006          85 ELLTSAVDSKIRES--FGSKSESGVQNCLEPSISVFSSLSKFE  125 (126)
Q Consensus        85 e~~~~~~L~~~~~~--~~~~~~~~~~~~~~qi~~~l~~l~~~~  125 (126)
                      ||+++|+|.+++..  +..++...+..++.||+.|++|||...
T Consensus       120 Ey~~~GsL~~~l~~~~~~~l~~~~~l~~aldiArGm~YLH~~~  162 (362)
T KOG0192|consen  120 EYMPGGSLSVLLHKKRKRKLPLKVRLRIALDIARGMEYLHSEG  162 (362)
T ss_pred             EeCCCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhcCC
Confidence            99999999999976  578999999999999999999999875

>KOG0591|consensus

Probab=99.88  E-value=8.2e-24  Score=133.06  Aligned_cols=118  Identities=14%  Similarity=0.114  Sum_probs=105.8

Q ss_pred             ccccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeee-eeEeCCe-EEE
Q psy8006           5 KNIISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQ-VFESSHD-MIL   82 (126)
Q Consensus         5 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~-~~~~~~~-~~l   82 (126)
                      .+|...+.||+|+||.||++.+..+|..+|.|.++-..++...++.+..|+.++++++| ||||++++ .+..++. ++|
T Consensus        19 ~~y~Il~~IG~GsFg~vykv~~~~~g~l~a~K~i~f~~md~k~rq~~v~Ei~lLkQL~H-pNIVqYy~~~f~~~~evlni   97 (375)
T KOG0591|consen   19 ADYQILKKIGRGSFGEVYKVQCLLDGKLVALKKIQFGMMDAKARQDCVKEISLLKQLNH-PNIVQYYAHSFIEDNEVLNI   97 (375)
T ss_pred             HHHHHHHHHcCCcchheEEeeeccCcchhhhhhcchhhccHHHHHHHHHHHHHHHhcCC-chHHHHHHHhhhccchhhHH
Confidence            45777889999999999999999999999999999777777778889999999999999 99999998 5555555 899


Q ss_pred             EEeccCcccHHHHHHh----cCCCCHHHHHHHHHHHHHHHHhhhc
Q psy8006          83 LLELLTSAVDSKIRES----FGSKSESGVQNCLEPSISVFSSLSK  123 (126)
Q Consensus        83 v~e~~~~~~L~~~~~~----~~~~~~~~~~~~~~qi~~~l~~l~~  123 (126)
                      |||+|+.|+|.++++.    +..++|..++.++.|++.|+...|.
T Consensus        98 vmE~c~~GDLsqmIk~~K~qkr~ipE~~Vwk~f~QL~~AL~~cH~  142 (375)
T KOG0591|consen   98 VMELCDAGDLSQMIKHFKKQKRLIPEKTVWKYFVQLCRALYHCHS  142 (375)
T ss_pred             HHHhhcccCHHHHHHHHHhccccCchHHHHHHHHHHHHHHHHHhc
Confidence            9999999999988864    4579999999999999999999996

>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional

Probab=99.88  E-value=1.4e-21  Score=129.19  Aligned_cols=122  Identities=12%  Similarity=0.068  Sum_probs=105.3

Q ss_pred             cccccceeeccCccceeEEEEEEccCC-cEEEEEEeecCCCC-chhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeEE
Q psy8006           4 IKNIISSIINDMGKYATVRRCRDRKNG-TQYAAKFLRKKRRS-TDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMI   81 (126)
Q Consensus         4 ~~~~~~~~~lg~g~~~~v~~~~~~~~~-~~~aiK~~~~~~~~-~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~~   81 (126)
                      ..+|...+.||+|+||.||+|.+..++ ..+|+|.+...... ......+.+|+.++..++| |||+++++.+...+..|
T Consensus        29 ~~~y~~~~~ig~G~~g~Vy~a~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h-p~Iv~~~~~~~~~~~~~  107 (340)
T PTZ00426         29 YEDFNFIRTLGTGSFGRVILATYKNEDFPPVAIKRFEKSKIIKQKQVDHVFSERKILNYINH-PFCVNLYGSFKDESYLY  107 (340)
T ss_pred             hhhcEEEEEEeecCCeEEEEEEEECCCCeEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCC-CCCcceEEEEEeCCEEE
Confidence            456777889999999999999876554 68999999765332 2234458899999999998 99999999999999999


Q ss_pred             EEEeccCcccHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          82 LLLELLTSAVDSKIRESFGSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        82 lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      ++|||+++++|.+++.....+++..+..++.|++.|++|||+.++
T Consensus       108 lv~Ey~~~g~L~~~i~~~~~~~~~~~~~~~~qi~~aL~~LH~~~i  152 (340)
T PTZ00426        108 LVLEFVIGGEFFTFLRRNKRFPNDVGCFYAAQIVLIFEYLQSLNI  152 (340)
T ss_pred             EEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence            999999999999999887889999999999999999999999764

>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5

Probab=99.88  E-value=1.5e-21  Score=125.91  Aligned_cols=120  Identities=18%  Similarity=0.262  Sum_probs=104.2

Q ss_pred             cccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeEEEEEe
Q psy8006           6 NIISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLLE   85 (126)
Q Consensus         6 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~~lv~e   85 (126)
                      +|...+.||+|+||.||++.+..++..+|+|.+............+.+|+.++..++| ||++++++.+...+..++|||
T Consensus         2 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h-~~iv~~~~~~~~~~~~~lv~e   80 (287)
T cd07848           2 KFEVLGVVGEGAYGVVLKCRHKETKEIVAIKKFKDSEENEEVKETTLRELKMLRTLKQ-ENIVELKEAFRRRGKLYLVFE   80 (287)
T ss_pred             CceEEEEecccCCEEEEEEEECCCCcEEEEEEEecccccccchhhHHHHHHHHHhCCC-ccccchhhhEecCCEEEEEEe
Confidence            5677889999999999999999999999999998765444444568899999999998 999999999999999999999


Q ss_pred             ccCcccHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          86 LLTSAVDSKIRESFGSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        86 ~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      |++++++..+......+++..+..++.|++.|+.|||+.++
T Consensus        81 ~~~~~~l~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i  121 (287)
T cd07848          81 YVEKNMLELLEEMPNGVPPEKVRSYIYQLIKAIHWCHKNDI  121 (287)
T ss_pred             cCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence            99998766555555679999999999999999999998764

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes

>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase

Probab=99.88  E-value=1.5e-21  Score=127.80  Aligned_cols=115  Identities=20%  Similarity=0.210  Sum_probs=100.2

Q ss_pred             eeccCccceeEEEEEE---ccCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeEEEEEecc
Q psy8006          11 IINDMGKYATVRRCRD---RKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLLELL   87 (126)
Q Consensus        11 ~~lg~g~~~~v~~~~~---~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~~lv~e~~   87 (126)
                      +.||+|+||.||++.+   ..++..+|+|.+..............+|+.++.+++| |||+++++.+..++..|+||||+
T Consensus         2 ~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h-~niv~~~~~~~~~~~~~lv~e~~   80 (318)
T cd05582           2 KVLGQGSFGKVFLVRKITGPDAGQLYAMKVLKKATLKVRDRVRTKMERDILAEVNH-PFIVKLHYAFQTEGKLYLILDFL   80 (318)
T ss_pred             ceeeeCCCEEEEEEEEeccCCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhCCC-CCcccEEEEEEcCCEEEEEEcCC
Confidence            4789999999998876   3578899999998754433334457789999999998 99999999999999999999999


Q ss_pred             CcccHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          88 TSAVDSKIRESFGSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        88 ~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      ++++|.+++.....+++..+..++.|++.|++|||+.++
T Consensus        81 ~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i  119 (318)
T cd05582          81 RGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLHSLGI  119 (318)
T ss_pred             CCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCE
Confidence            999999988877789999999999999999999998764

Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate

>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases

Probab=99.88  E-value=9.6e-22  Score=130.07  Aligned_cols=120  Identities=19%  Similarity=0.233  Sum_probs=106.5

Q ss_pred             cccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCc-hhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeEEEEE
Q psy8006           6 NIISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRST-DLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLL   84 (126)
Q Consensus         6 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~-~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~~lv~   84 (126)
                      +|...+.||+|+||.||+|.+..++..+|+|.+....... .....+..|+.++..++| |+++++++.+..++..++||
T Consensus         2 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~-~~i~~~~~~~~~~~~~~lv~   80 (350)
T cd05573           2 DFEVIKVIGRGAFGEVWLVRDKDTGQVYAMKVLRKSDMIKRNQIAHVRAERDILADADS-PWIVKLYYSFQDEEHLYLVM   80 (350)
T ss_pred             CceEEEEEEeCCcEEEEEEEECCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhcCC-CCccchhhheecCCeEEEEE
Confidence            5777889999999999999999999999999998654322 334458889999999998 99999999999999999999


Q ss_pred             eccCcccHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          85 ELLTSAVDSKIRESFGSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        85 e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      ||+++++|.+++.....+++..++.++.|++.|++|||+.++
T Consensus        81 e~~~~~~L~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~gi  122 (350)
T cd05573          81 EYMPGGDLMNLLIRKDVFPEETARFYIAELVLALDSVHKLGF  122 (350)
T ss_pred             cCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence            999999999998877789999999999999999999998764

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the

>KOG0607|consensus

Probab=99.88  E-value=6.6e-23  Score=131.16  Aligned_cols=116  Identities=21%  Similarity=0.320  Sum_probs=108.0

Q ss_pred             ceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeEEEEEeccC
Q psy8006           9 SSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLLELLT   88 (126)
Q Consensus         9 ~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~~lv~e~~~   88 (126)
                      .+++||+|+++.|-.|....++..||||++.+.  ..+.+.+..||++++.+++.|+||+++.+.|+++...|||||-+.
T Consensus        82 t~e~LGeGAyasVqtcv~i~t~~EYAVKiidKq--~gHsR~RvfREVe~f~~Cqgh~nilqLiefFEdd~~FYLVfEKm~  159 (463)
T KOG0607|consen   82 TSELLGEGAYASVQTCVSIQTGKEYAVKIIDKQ--PGHSRSRVFREVETFYQCQGHKNILQLIEFFEDDTRFYLVFEKMR  159 (463)
T ss_pred             HHHHhcCccceeeeeeeeeccchhhhhhhhhcC--CchHHHHHHHHHHHHHHhcCCccHHHHHHHhcccceEEEEEeccc
Confidence            467999999999999999999999999999987  345567899999999999988999999999999999999999999


Q ss_pred             cccHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          89 SAVDSKIRESFGSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        89 ~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      ||+|.+.++.+.+|+|.++..++..|+.||.+||+.||
T Consensus       160 GGplLshI~~~~~F~E~EAs~vvkdia~aLdFlH~kgI  197 (463)
T KOG0607|consen  160 GGPLLSHIQKRKHFNEREASRVVKDIASALDFLHTKGI  197 (463)
T ss_pred             CchHHHHHHHhhhccHHHHHHHHHHHHHHHHHHhhcCc
Confidence            99999999888899999999999999999999999886

>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha

Probab=99.88  E-value=1.8e-21  Score=127.83  Aligned_cols=120  Identities=16%  Similarity=0.108  Sum_probs=103.7

Q ss_pred             ccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCC-chhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeEEEEEe
Q psy8006           7 IISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRS-TDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLLE   85 (126)
Q Consensus         7 ~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~-~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~~lv~e   85 (126)
                      |...+.||+|+||.||++.+..++..+|+|.+...... ......+..|..++..+.|+++++++++.+...+..|+|||
T Consensus         2 f~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E   81 (323)
T cd05615           2 FNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALQDKPPFLTQLHSCFQTVDRLYFVME   81 (323)
T ss_pred             ceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCchhheeeEEecCCEEEEEEc
Confidence            45568899999999999999999999999999865332 22234577888888888876889999999999999999999


Q ss_pred             ccCcccHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          86 LLTSAVDSKIRESFGSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        86 ~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      |+++++|.+++.....+++..+..++.|++.|++|||+.++
T Consensus        82 y~~~g~L~~~i~~~~~l~~~~~~~i~~qi~~al~~lH~~~i  122 (323)
T cd05615          82 YVNGGDLMYHIQQVGKFKEPQAVFYAAEISVGLFFLHRRGI  122 (323)
T ss_pred             CCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence            99999999998887789999999999999999999998764

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a

>KOG0589|consensus

Probab=99.88  E-value=3.2e-22  Score=133.05  Aligned_cols=121  Identities=12%  Similarity=0.146  Sum_probs=110.3

Q ss_pred             cccccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCe-EEE
Q psy8006           4 IKNIISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHD-MIL   82 (126)
Q Consensus         4 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~-~~l   82 (126)
                      +++|...+.+|+|+||.++...++.....+++|.+.........+....+|+.++.+++| ||||.+.+.|..++. .+|
T Consensus         3 m~~Ye~~~~iG~GafG~a~lvrhk~~~~~~vlK~I~l~~~t~~~r~~A~~E~~lis~~~h-P~iv~y~ds~~~~~~~l~I   81 (426)
T KOG0589|consen    3 MDNYEVLRQVGRGAFGSALLVRHKSDDKLYVLKKINLEKLTEPERRSAIQEMDLLSKLLH-PNIVEYKDSFEEDGQLLCI   81 (426)
T ss_pred             cchhhhhhhcCccccchhhhhhhccCCceEEEEEEeccccCchhhHHHHHHHHHHHhccC-CCeeeeccchhcCCceEEE
Confidence            578888999999999999999999999999999999988877766678999999999999 999999999998887 999


Q ss_pred             EEeccCcccHHHHHHhc--CCCCHHHHHHHHHHHHHHHHhhhccC
Q psy8006          83 LLELLTSAVDSKIRESF--GSKSESGVQNCLEPSISVFSSLSKFE  125 (126)
Q Consensus        83 v~e~~~~~~L~~~~~~~--~~~~~~~~~~~~~qi~~~l~~l~~~~  125 (126)
                      +|+|++||++.+.++..  ..|+++.+..|+-|++.|+.|||+..
T Consensus        82 vm~Y~eGg~l~~~i~~~k~~~f~E~~i~~~~~Q~~~av~ylH~~~  126 (426)
T KOG0589|consen   82 VMEYCEGGDLAQLIKEQKGVLFPEERILKWFVQILLAVNYLHENR  126 (426)
T ss_pred             EEeecCCCCHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHhhh
Confidence            99999999998888653  47999999999999999999999754

>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C

Probab=99.88  E-value=2.9e-21  Score=126.79  Aligned_cols=121  Identities=16%  Similarity=0.099  Sum_probs=104.5

Q ss_pred             cccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCC-chhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeEEEEE
Q psy8006           6 NIISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRS-TDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLL   84 (126)
Q Consensus         6 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~-~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~~lv~   84 (126)
                      +|...+.||+|+||.||+|.+..++..+|+|++...... ......+..|..++..++|+++++.+++.+...+..|+||
T Consensus         1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~   80 (324)
T cd05587           1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVM   80 (324)
T ss_pred             CceEEEEEeeccCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhcCCCCceeeeEEEEEcCCEEEEEE
Confidence            355678899999999999999999999999999865432 2233457889999999988677899999999899999999


Q ss_pred             eccCcccHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          85 ELLTSAVDSKIRESFGSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        85 e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      ||+++++|.+++.....+++..+..++.|++.|++|||+.++
T Consensus        81 E~~~~g~L~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i  122 (324)
T cd05587          81 EYVNGGDLMYHIQQVGKFKEPHAVFYAAEIAIGLFFLHSKGI  122 (324)
T ss_pred             cCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence            999999999888877789999999999999999999999764

Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory

>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases

Probab=99.88  E-value=2.5e-21  Score=127.49  Aligned_cols=120  Identities=17%  Similarity=0.171  Sum_probs=103.9

Q ss_pred             cccceeeccCccceeEEEEEEccCCcEEEEEEeecCCC-CchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeEEEEE
Q psy8006           6 NIISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRR-STDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLL   84 (126)
Q Consensus         6 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~-~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~~lv~   84 (126)
                      +|...+.||+|+||.||.+.+..++..+|+|.+..... .......+.+|..++..++| ++++++++.+..++..|+||
T Consensus         2 ~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~-~~i~~~~~~~~~~~~~~lv~   80 (331)
T cd05597           2 DFEILKVIGRGAFGEVAVVKMKNTGQVYAMKILNKWEMLKRAETACFREERDVLVNGDR-RWITNLHYAFQDENNLYLVM   80 (331)
T ss_pred             CceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCC-CCCCceEEEEecCCeEEEEE
Confidence            56778899999999999999999999999999976432 12223457889999999988 99999999999999999999


Q ss_pred             eccCcccHHHHHHh-cCCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          85 ELLTSAVDSKIRES-FGSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        85 e~~~~~~L~~~~~~-~~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      ||+++++|.+++.. ...+++..+..++.|++.|++|||+.++
T Consensus        81 e~~~g~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i  123 (331)
T cd05597          81 DYYVGGDLLTLLSKFEDRLPEDMARFYLAEMVLAIDSVHQLGY  123 (331)
T ss_pred             ecCCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCe
Confidence            99999999988875 4579999999999999999999998764

Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,

>KOG0593|consensus

Probab=99.88  E-value=2.9e-22  Score=127.21  Aligned_cols=120  Identities=18%  Similarity=0.229  Sum_probs=103.8

Q ss_pred             ccccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeEEEEE
Q psy8006           5 KNIISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLL   84 (126)
Q Consensus         5 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~~lv~   84 (126)
                      +-|..-..+|+|+||.|++|+++.+|..||||.+..+.-++...+-.+||+..+++++| +|+|.+.+.|.....+++|+
T Consensus         2 ekYE~LgkvGEGSYGvV~KCrnk~TgqIVAIKkF~Esedd~~VkKIAlREIrmLKqLkH-~NLVnLiEVFrrkrklhLVF   80 (396)
T KOG0593|consen    2 EKYEKLGKVGEGSYGVVMKCRNKDTGQIVAIKKFVESEDDPVVKKIALREIRMLKQLKH-ENLVNLIEVFRRKRKLHLVF   80 (396)
T ss_pred             cHHhhhhccccCcceEEEEeccCCcccEEEEEeeccCCccHHHHHHHHHHHHHHHhccc-chHHHHHHHHHhcceeEEEe
Confidence            34555567999999999999999999999999998765544445558999999999999 99999999999999999999


Q ss_pred             eccCcccHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhhccC
Q psy8006          85 ELLTSAVDSKIRESFGSKSESGVQNCLEPSISVFSSLSKFE  125 (126)
Q Consensus        85 e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~l~~~~  125 (126)
                      ||++..-|..+=.....+++..+..+++|++.|+.|.|+-.
T Consensus        81 E~~dhTvL~eLe~~p~G~~~~~vk~~l~Q~l~ai~~cHk~n  121 (396)
T KOG0593|consen   81 EYCDHTVLHELERYPNGVPSELVKKYLYQLLKAIHFCHKNN  121 (396)
T ss_pred             eecchHHHHHHHhccCCCCHHHHHHHHHHHHHHhhhhhhcC
Confidence            99999966665554456899999999999999999999864

>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta

Probab=99.88  E-value=2.2e-21  Score=127.26  Aligned_cols=116  Identities=17%  Similarity=0.159  Sum_probs=100.0

Q ss_pred             eeccCccceeEEEEEEccCCcEEEEEEeecCCCC-chhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeEEEEEeccCc
Q psy8006          11 IINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRS-TDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLLELLTS   89 (126)
Q Consensus        11 ~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~-~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~~lv~e~~~~   89 (126)
                      +.||+|+||.||++.+..++..+|+|.+...... .........|..++....+|||++++++.+...+..|+||||+++
T Consensus         1 ~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~~~~~iv~Ey~~~   80 (320)
T cd05590           1 RVLGKGSFGKVMLARLKESGRLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLYCCFQTPDRLFFVMEFVNG   80 (320)
T ss_pred             CeeeeCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhccCCCchhceeeEEEcCCEEEEEEcCCCC
Confidence            3689999999999999999999999999865332 222345778888888775449999999999999999999999999


Q ss_pred             ccHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          90 AVDSKIRESFGSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        90 ~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      ++|.+++.....+++..+..++.|++.|++|||+.++
T Consensus        81 g~L~~~i~~~~~l~~~~~~~~~~ql~~~L~~lH~~~i  117 (320)
T cd05590          81 GDLMFHIQKSRRFDEARARFYAAEITSALMFLHDKGI  117 (320)
T ss_pred             chHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence            9999888877789999999999999999999998764

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal

>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase

Probab=99.88  E-value=2.9e-21  Score=128.93  Aligned_cols=121  Identities=15%  Similarity=0.181  Sum_probs=104.4

Q ss_pred             cccccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCc-hhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeEEE
Q psy8006           4 IKNIISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRST-DLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMIL   82 (126)
Q Consensus         4 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~-~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~~l   82 (126)
                      ..+|...+.||+|+||.||++.+..++..+|+|.+....... .....+.+|+.++..++| ||++++++.+..+...|+
T Consensus        42 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~h-~~iv~~~~~~~~~~~~~l  120 (370)
T cd05596          42 AEDFDVIKVIGRGAFGEVQLVRHKSSKQVYAMKLLSKFEMIKRSDSAFFWEERDIMAHANS-EWIVQLHYAFQDDKYLYM  120 (370)
T ss_pred             HHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCC-CCcceEEEEEecCCEEEE
Confidence            456777889999999999999999999999999997643222 223347789999999998 999999999999999999


Q ss_pred             EEeccCcccHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          83 LLELLTSAVDSKIRESFGSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        83 v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      ||||+++++|.+++.. ..+++..+..++.|++.|++|||+.++
T Consensus       121 v~Ey~~gg~L~~~l~~-~~l~~~~~~~~~~qi~~aL~~LH~~~i  163 (370)
T cd05596         121 VMEYMPGGDLVNLMSN-YDIPEKWARFYTAEVVLALDAIHSMGF  163 (370)
T ss_pred             EEcCCCCCcHHHHHHh-cCCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence            9999999999988875 458999999999999999999998764

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in

>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta

Probab=99.88  E-value=3e-21  Score=126.43  Aligned_cols=116  Identities=17%  Similarity=0.117  Sum_probs=98.1

Q ss_pred             eeccCccceeEEEEEEccCCcEEEEEEeecCCCC-chhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeEEEEEeccCc
Q psy8006          11 IINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRS-TDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLLELLTS   89 (126)
Q Consensus        11 ~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~-~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~~lv~e~~~~   89 (126)
                      +.||+|+||.||++.+..++..+|+|.+...... .........|..++....+||||+++++.+...+..|+||||+++
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~i~~~~~~~~~~~~~~lv~e~~~g   80 (316)
T cd05592           1 KVLGKGSFGKVMLAELKGTNEFFAIKALKKDVVLEDDDVECTMVERRVLALAWEHPFLTHLFCTFQTKEHLFFVMEYLNG   80 (316)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence            3689999999999999999999999999865432 222334566777776654449999999999999999999999999


Q ss_pred             ccHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          90 AVDSKIRESFGSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        90 ~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      ++|..+++....+++..+..++.|++.|++|||+.++
T Consensus        81 g~L~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~i  117 (316)
T cd05592          81 GDLMFHIQSSGRFDEARARFYAAEIICGLQFLHKKGI  117 (316)
T ss_pred             CcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCE
Confidence            9999988877789999999999999999999998764

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp

>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon

Probab=99.88  E-value=3.7e-21  Score=126.20  Aligned_cols=116  Identities=14%  Similarity=0.111  Sum_probs=99.8

Q ss_pred             eeccCccceeEEEEEEccCCcEEEEEEeecCCCC-chhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeEEEEEeccCc
Q psy8006          11 IINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRS-TDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLLELLTS   89 (126)
Q Consensus        11 ~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~-~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~~lv~e~~~~   89 (126)
                      +.||+|+||.||+|.+..++..+|+|.+...... ......+..|..++..+.+||+|+++++.+...+..|+||||+++
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~   80 (321)
T cd05591           1 KVLGKGSFGKVMLAELKGTDEVYAIKVLKKDVILQDDDVDCTMTEKRILALAAKHPFLTALHCCFQTKDRLFFVMEYVNG   80 (321)
T ss_pred             CccccCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCeEEEEEeCCCC
Confidence            4689999999999999999999999999865432 222335778888888775459999999999999999999999999


Q ss_pred             ccHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          90 AVDSKIRESFGSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        90 ~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      ++|...+.....+++..+..++.|++.|++|||+.++
T Consensus        81 ~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~i  117 (321)
T cd05591          81 GDLMFQIQRSRKFDEPRSRFYAAEVTLALMFLHRHGV  117 (321)
T ss_pred             CcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence            9998888877789999999999999999999999764

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to

>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta

Probab=99.88  E-value=5e-21  Score=125.88  Aligned_cols=116  Identities=20%  Similarity=0.186  Sum_probs=101.6

Q ss_pred             eeccCccceeEEEEEEccCCcEEEEEEeecCCCCc-hhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeEEEEEeccCc
Q psy8006          11 IINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRST-DLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLLELLTS   89 (126)
Q Consensus        11 ~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~-~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~~lv~e~~~~   89 (126)
                      +.||+|+||.||++.+..++..+|+|.+....... .....+.+|..++.++.+||+++.+++.+...+..|+||||+++
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~   80 (327)
T cd05617           1 RVIGRGSYAKVLLVRLKKNDQIYAMKVVKKELVHDDEDIDWVQTEKHVFEQASSNPFLVGLHSCFQTTSRLFLVIEYVNG   80 (327)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhhcCCCCEeeEEEEEEeCCEEEEEEeCCCC
Confidence            46899999999999999999999999998754322 23345788999999987569999999999999999999999999


Q ss_pred             ccHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          90 AVDSKIRESFGSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        90 ~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      ++|..++.....+++..+..++.|++.|++|||+.++
T Consensus        81 ~~L~~~~~~~~~l~~~~~~~~~~qi~~al~~lH~~~i  117 (327)
T cd05617          81 GDLMFHMQRQRKLPEEHARFYAAEICIALNFLHERGI  117 (327)
T ss_pred             CcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence            9998888877789999999999999999999998764

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways

>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase

Probab=99.87  E-value=3.9e-21  Score=126.41  Aligned_cols=120  Identities=17%  Similarity=0.225  Sum_probs=105.0

Q ss_pred             cccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCC-chhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeEEEEE
Q psy8006           6 NIISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRS-TDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLL   84 (126)
Q Consensus         6 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~-~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~~lv~   84 (126)
                      +|...+.||+|+||.||++.+..++..+|+|.+...... ......+.+|+.++..++| |+++++++.+...+..++||
T Consensus         2 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~~-~~i~~~~~~~~~~~~~~lv~   80 (330)
T cd05601           2 DFDVKSLVGRGHFGEVQVVREKATGDIYAMKVMKKSVLLAQETVSFFEEERDILSISNS-PWIPQLQYAFQDKDNLYLVM   80 (330)
T ss_pred             CceEEEEEEeccCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCC-CCCcceeeEEecCCeEEEEE
Confidence            567788999999999999999999999999999875432 2233457889999998888 99999999999999999999


Q ss_pred             eccCcccHHHHHHhc-CCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          85 ELLTSAVDSKIRESF-GSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        85 e~~~~~~L~~~~~~~-~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      ||+++++|.+++... ..+++..+..++.|++.|++|||+.++
T Consensus        81 e~~~~~~L~~~l~~~~~~l~~~~~~~~~~qi~~aL~~lH~~~i  123 (330)
T cd05601          81 EYQPGGDLLSLLNRYEDQFDEDMAQFYLAELVLAIHSVHQMGY  123 (330)
T ss_pred             CCCCCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence            999999999998765 679999999999999999999998764

Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor

>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta

Probab=99.87  E-value=5.4e-21  Score=125.94  Aligned_cols=121  Identities=16%  Similarity=0.174  Sum_probs=104.0

Q ss_pred             ccccceeeccCccceeEEEEEEccCCcEEEEEEeecCCC-CchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeEEEE
Q psy8006           5 KNIISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRR-STDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILL   83 (126)
Q Consensus         5 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~-~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~~lv   83 (126)
                      ++|...+.||+|+||.||++.+..+++.+|+|.+..... .......+..|..++..++| ++++++++.+...+..|+|
T Consensus         1 d~y~i~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~-~~i~~l~~~~~~~~~~~lv   79 (331)
T cd05624           1 DDFEIIKVIGRGAFGEVAVVKMKHTERIYAMKILNKWEMLKRAETACFREERNVLVNGDC-QWITTLHYAFQDENYLYLV   79 (331)
T ss_pred             CCceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHHHhhHHHHHHHHHHHHHHhCCC-CCEeeEEEEEEcCCEEEEE
Confidence            356778899999999999999999999999999976422 12223347788889988888 9999999999999999999


Q ss_pred             EeccCcccHHHHHHh-cCCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          84 LELLTSAVDSKIRES-FGSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        84 ~e~~~~~~L~~~~~~-~~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      |||+++++|.+++.. ...+++..+..++.|++.|++|||+.++
T Consensus        80 ~Ey~~gg~L~~~l~~~~~~l~~~~~~~~~~qi~~~L~~lH~~~i  123 (331)
T cd05624          80 MDYYVGGDLLTLLSKFEDRLPEDMARFYIAEMVLAIHSIHQLHY  123 (331)
T ss_pred             EeCCCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence            999999999998876 4679999999999999999999998764

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.

>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C

Probab=99.87  E-value=4.5e-21  Score=125.69  Aligned_cols=116  Identities=16%  Similarity=0.140  Sum_probs=100.3

Q ss_pred             eeccCccceeEEEEEEccCCcEEEEEEeecCCCC-chhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeEEEEEeccCc
Q psy8006          11 IINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRS-TDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLLELLTS   89 (126)
Q Consensus        11 ~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~-~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~~lv~e~~~~   89 (126)
                      +.||+|+||.||++.+..++..+|+|.+...... ......+.+|..++..+.+|||++++++.+...+..|+||||+++
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~   80 (318)
T cd05570           1 KVLGKGSFGKVLLAELKGTDELYAVKVLKKDVILQDDDVECTMTEKRVLALAGKHPFLTQLHSCFQTKDRLFFVMEYVNG   80 (318)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence            4689999999999999999999999999865432 222345778888888885449999999999999999999999999


Q ss_pred             ccHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          90 AVDSKIRESFGSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        90 ~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      ++|..++.+...+++..+..++.|++.|++|||+.++
T Consensus        81 ~~L~~~~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~i  117 (318)
T cd05570          81 GDLMFHIQRSGRFDEPRARFYAAEIVLGLQFLHERGI  117 (318)
T ss_pred             CCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCe
Confidence            9999888877789999999999999999999998764

Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re

>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota

Probab=99.87  E-value=7e-21  Score=125.33  Aligned_cols=116  Identities=17%  Similarity=0.151  Sum_probs=100.5

Q ss_pred             eeccCccceeEEEEEEccCCcEEEEEEeecCCCCc-hhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeEEEEEeccCc
Q psy8006          11 IINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRST-DLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLLELLTS   89 (126)
Q Consensus        11 ~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~-~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~~lv~e~~~~   89 (126)
                      +.||+|+||.||++.+..++..+|+|.+....... .....+.+|..++.++.+|||++++++.+...+..++||||+++
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E~~~~   80 (329)
T cd05618           1 RVIGRGSYAKVLLVRLKKTERIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNG   80 (329)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEhhHhcchhHHHHHHHHHHHHHhcCCCCcCCceeeEEEeCCEEEEEEeCCCC
Confidence            46899999999999999999999999998764322 23345778888888874449999999999999999999999999


Q ss_pred             ccHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          90 AVDSKIRESFGSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        90 ~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      ++|..++.....+++..+..++.|++.|++|||+.++
T Consensus        81 ~~L~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~i  117 (329)
T cd05618          81 GDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERGI  117 (329)
T ss_pred             CCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence            9998888777789999999999999999999998764

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o

>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha

Probab=99.87  E-value=5.3e-21  Score=125.62  Aligned_cols=114  Identities=19%  Similarity=0.183  Sum_probs=100.0

Q ss_pred             eeccCccceeEEEEEEccCCcEEEEEEeecCCCCc-hhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeEEEEEeccCc
Q psy8006          11 IINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRST-DLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLLELLTS   89 (126)
Q Consensus        11 ~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~-~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~~lv~e~~~~   89 (126)
                      +.||+|+||.||.+.+..++..+|+|.+....... .....+.+|+.++..++| |||+++.+.+...+..++||||+++
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~~~h-p~i~~~~~~~~~~~~~~lv~E~~~~   79 (325)
T cd05594           1 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRH-PFLTALKYSFQTHDRLCFVMEYANG   79 (325)
T ss_pred             CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCC-CCCCceEEEEEcCCEEEEEEeCCCC
Confidence            46899999999999999999999999998654322 223457789999999998 9999999999999999999999999


Q ss_pred             ccHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhhc-cC
Q psy8006          90 AVDSKIRESFGSKSESGVQNCLEPSISVFSSLSK-FE  125 (126)
Q Consensus        90 ~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~l~~-~~  125 (126)
                      ++|..++.....+++..+..++.|++.|++|||+ .+
T Consensus        80 ~~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~lH~~~~  116 (325)
T cd05594          80 GELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEKN  116 (325)
T ss_pred             CcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhcCC
Confidence            9998888877789999999999999999999996 44

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien

>KOG1187|consensus

Probab=99.87  E-value=4e-21  Score=127.53  Aligned_cols=117  Identities=18%  Similarity=0.109  Sum_probs=101.2

Q ss_pred             cccccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCC-eEEE
Q psy8006           4 IKNIISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSH-DMIL   82 (126)
Q Consensus         4 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~-~~~l   82 (126)
                      .+||-....||+|+||.||+|.... +..+|||.+.......  ..+|.+|+.++.+++| ||++++.++|...+ ...|
T Consensus        74 T~~Fs~~~~ig~Ggfg~VYkG~l~~-~~~vAVK~~~~~~~~~--~~eF~~Ei~~ls~l~H-~Nlv~LlGyC~e~~~~~~L  149 (361)
T KOG1187|consen   74 TNNFSESNLIGEGGFGTVYKGVLSD-GTVVAVKRLSSNSGQG--EREFLNEVEILSRLRH-PNLVKLLGYCLEGGEHRLL  149 (361)
T ss_pred             HhCCchhcceecCCCeEEEEEEECC-CCEEEEEEecCCCCcc--hhHHHHHHHHHhcCCC-cCcccEEEEEecCCceEEE
Confidence            4678888999999999999998765 4889999776654321  3369999999999998 99999999999888 5999


Q ss_pred             EEeccCcccHHHHHHhcC--CCCHHHHHHHHHHHHHHHHhhhcc
Q psy8006          83 LLELLTSAVDSKIRESFG--SKSESGVQNCLEPSISVFSSLSKF  124 (126)
Q Consensus        83 v~e~~~~~~L~~~~~~~~--~~~~~~~~~~~~qi~~~l~~l~~~  124 (126)
                      |+||++.|+|.+.+....  +++......|+.+++.||+|||..
T Consensus       150 VYEym~nGsL~d~L~~~~~~~L~W~~R~kIa~g~A~gL~yLH~~  193 (361)
T KOG1187|consen  150 VYEYMPNGSLEDHLHGKKGEPLDWETRLKIALGAARGLAYLHEG  193 (361)
T ss_pred             EEEccCCCCHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHHHccC
Confidence            999999999988886543  789999999999999999999974

>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2

Probab=99.87  E-value=5.4e-21  Score=127.65  Aligned_cols=121  Identities=13%  Similarity=0.158  Sum_probs=104.5

Q ss_pred             cccccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCc-hhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeEEE
Q psy8006           4 IKNIISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRST-DLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMIL   82 (126)
Q Consensus         4 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~-~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~~l   82 (126)
                      ..+|...+.||+|+||.||++.+..++..+|+|.+....... .....+.+|+.++..++| ||++++++.+..+...|+
T Consensus        42 ~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~h-p~iv~~~~~~~~~~~~~l  120 (370)
T cd05621          42 AEDYDVVKVIGRGAFGEVQLVRHKSSQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANS-PWVVQLFCAFQDDKYLYM  120 (370)
T ss_pred             HHHCeEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCC-CCEeeEEEEEEcCCEEEE
Confidence            356777889999999999999999999999999997643222 223347789999999998 999999999999999999


Q ss_pred             EEeccCcccHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          83 LLELLTSAVDSKIRESFGSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        83 v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      ||||+++++|.+++.. ..+++..+..++.|++.|++|||+.++
T Consensus       121 v~Ey~~gg~L~~~l~~-~~~~~~~~~~~~~qil~aL~~LH~~~I  163 (370)
T cd05621         121 VMEYMPGGDLVNLMSN-YDVPEKWAKFYTAEVVLALDAIHSMGL  163 (370)
T ss_pred             EEcCCCCCcHHHHHHh-cCCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence            9999999999998875 458999999999999999999999764

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found

>KOG0580|consensus

Probab=99.87  E-value=1.6e-22  Score=124.40  Aligned_cols=123  Identities=16%  Similarity=0.136  Sum_probs=109.4

Q ss_pred             cccccccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCc-hhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeE
Q psy8006           2 NNIKNIISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRST-DLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDM   80 (126)
Q Consensus         2 ~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~-~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~   80 (126)
                      +++++|--++.||.|.||.||.|+.++++-.+|+|++-++.... .....+.+|+++-..++| |||.+++++|.+...+
T Consensus        19 ~~l~dfeigr~LgkgkFG~vYlarekks~~IvalKVlfKsqi~~~~v~~qlrREiEIqs~L~h-pnilrlY~~fhd~~ri   97 (281)
T KOG0580|consen   19 WTLDDFEIGRPLGKGKFGNVYLAREKKSLFIVALKVLFKSQILKTQVEHQLRREIEIQSHLRH-PNILRLYGYFHDSKRI   97 (281)
T ss_pred             cchhhccccccccCCccccEeEeeeccCCcEEEEeeeeHHHHHHhcchhhhhheeEeecccCC-ccHHhhhhheecccee
Confidence            35678888999999999999999999999999999998765432 234468999999999999 9999999999999999


Q ss_pred             EEEEeccCcccHHHHHH--hcCCCCHHHHHHHHHHHHHHHHhhhccC
Q psy8006          81 ILLLELLTSAVDSKIRE--SFGSKSESGVQNCLEPSISVFSSLSKFE  125 (126)
Q Consensus        81 ~lv~e~~~~~~L~~~~~--~~~~~~~~~~~~~~~qi~~~l~~l~~~~  125 (126)
                      |+++||+..|++...++  ....+++..+..++.|++.|+.|.|...
T Consensus        98 yLilEya~~gel~k~L~~~~~~~f~e~~~a~Yi~q~A~Al~y~h~k~  144 (281)
T KOG0580|consen   98 YLILEYAPRGELYKDLQEGRMKRFDEQRAATYIKQLANALLYCHLKR  144 (281)
T ss_pred             EEEEEecCCchHHHHHHhcccccccccchhHHHHHHHHHHHHhccCC
Confidence            99999999999998888  4457999999999999999999999754

>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta

Probab=99.87  E-value=9.2e-21  Score=124.41  Aligned_cols=121  Identities=16%  Similarity=0.109  Sum_probs=103.4

Q ss_pred             cccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCc-hhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeEEEEE
Q psy8006           6 NIISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRST-DLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLL   84 (126)
Q Consensus         6 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~-~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~~lv~   84 (126)
                      +|...+.||+|+||.||++.+..++..+|+|.+....... ........|..++....+|++++.+++.+...+..|+||
T Consensus         1 df~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~   80 (323)
T cd05616           1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALSGKPPFLTQLHSCFQTMDRLYFVM   80 (323)
T ss_pred             CceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCeEeeEEEEEecCCEEEEEE
Confidence            3556788999999999999999999999999998654322 223346778888888876699999999999999999999


Q ss_pred             eccCcccHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          85 ELLTSAVDSKIRESFGSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        85 e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      ||+++++|...+.....+++..+..++.|++.|++|||+.++
T Consensus        81 E~~~~g~L~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~i  122 (323)
T cd05616          81 EYVNGGDLMYQIQQVGRFKEPHAVFYAAEIAIGLFFLHSKGI  122 (323)
T ss_pred             cCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCE
Confidence            999999999888877789999999999999999999998763

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and

>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases

Probab=99.87  E-value=9.2e-21  Score=122.44  Aligned_cols=120  Identities=21%  Similarity=0.210  Sum_probs=102.1

Q ss_pred             cccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCch-hHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeEEEEE
Q psy8006           6 NIISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTD-LKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLL   84 (126)
Q Consensus         6 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~-~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~~lv~   84 (126)
                      +|...+.||+|+||.||++.+..++..+|+|.+........ ....+.+|+.+++.++| |+++++++.+..++..+++|
T Consensus         1 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h-~~iv~~~~~~~~~~~~~lv~   79 (285)
T cd05605           1 TFRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNS-RFVVSLAYAYETKDALCLVL   79 (285)
T ss_pred             CceEEEEEecCCCeEEEEEEEcCCCceEEEEEEehhhhhhhhhHHHHHHHHHHHHhcCC-CCEeeeeeeecCCCeEEEEE
Confidence            35567889999999999999999999999999986543222 22347789999999998 99999999999889999999


Q ss_pred             eccCcccHHHHHHhc--CCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          85 ELLTSAVDSKIRESF--GSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        85 e~~~~~~L~~~~~~~--~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      ||+++++|..++...  ..+++..+..++.|++.|+.|||+.++
T Consensus        80 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i  123 (285)
T cd05605          80 TLMNGGDLKFHIYNMGNPGFDEERAVFYAAEITCGLEDLHRERI  123 (285)
T ss_pred             eccCCCcHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHHCCc
Confidence            999999998777542  468999999999999999999998764

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,

>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1

Probab=99.87  E-value=8.6e-21  Score=121.20  Aligned_cols=120  Identities=17%  Similarity=0.244  Sum_probs=105.7

Q ss_pred             cccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCc----hhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeEE
Q psy8006           6 NIISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRST----DLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMI   81 (126)
Q Consensus         6 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~----~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~~   81 (126)
                      +|...+.||+|++|.||.+.+..++..+|+|.+.......    .....+.+|+.+++.++| +|++++++.+..++..+
T Consensus         1 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~alk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h-~~iv~~~~~~~~~~~~~   79 (268)
T cd06630           1 EWLKGQQLGTGAFSSCYQARDVKTGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARLNH-PHIIRMLGATCEDSHFN   79 (268)
T ss_pred             CccccceecCcCceEEEEEEEcCCCcEEEEEEeecccCCchhHHHHHHHHHHHHHHHHHcCC-CceehhhceeccCCeEE
Confidence            4677889999999999999999999999999997644221    123468899999999998 99999999999999999


Q ss_pred             EEEeccCcccHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          82 LLLELLTSAVDSKIRESFGSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        82 lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      +++||+++++|.+++++...+++..+..++.|++.|++|||+.++
T Consensus        80 ~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ql~~al~~LH~~~i  124 (268)
T cd06630          80 LFVEWMAGGSVSHLLSKYGAFKEAVIINYTEQLLRGLSYLHENQI  124 (268)
T ss_pred             EEEeccCCCcHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHhCCe
Confidence            999999999999999877789999999999999999999998763

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their

>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4

Probab=99.87  E-value=1e-20  Score=122.20  Aligned_cols=119  Identities=20%  Similarity=0.190  Sum_probs=101.9

Q ss_pred             ccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCch-hHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeEEEEEe
Q psy8006           7 IISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTD-LKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLLE   85 (126)
Q Consensus         7 ~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~-~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~~lv~e   85 (126)
                      |...+.||+|+||.||++.+..++..+|+|.+........ ....+.+|+.++..++| ++++++.+.+..++..+++||
T Consensus         2 f~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~-~~iv~~~~~~~~~~~~~lv~e   80 (285)
T cd05631           2 FRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKRILEKVNS-RFVVSLAYAYETKDALCLVLT   80 (285)
T ss_pred             ceEEEEEecCCCEEEEEEEEecCCceEEEEEeeHhhhhhhhhHHHHHHHHHHHHhcCC-CcEEEEEEEEccCCeEEEEEE
Confidence            5667899999999999999999999999999986543222 22347889999999998 999999999999999999999


Q ss_pred             ccCcccHHHHHHh--cCCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          86 LLTSAVDSKIRES--FGSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        86 ~~~~~~L~~~~~~--~~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      |+++++|...+..  ...+++..+..++.|++.|++|||+.++
T Consensus        81 ~~~~g~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i  123 (285)
T cd05631          81 IMNGGDLKFHIYNMGNPGFDEQRAIFYAAELCCGLEDLQRERI  123 (285)
T ss_pred             ecCCCcHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhCCE
Confidence            9999999777653  2368999999999999999999998764

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i

>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1

Probab=99.87  E-value=8.6e-21  Score=126.73  Aligned_cols=121  Identities=13%  Similarity=0.158  Sum_probs=104.4

Q ss_pred             cccccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCC-chhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeEEE
Q psy8006           4 IKNIISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRS-TDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMIL   82 (126)
Q Consensus         4 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~-~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~~l   82 (126)
                      ..+|...+.||+|+||.||++.+..++..+|+|.+...... ......+.+|..++..++| ||++++++.+..+...|+
T Consensus        42 ~~~y~i~~~lG~G~fg~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~i~~~~~h-p~iv~~~~~~~~~~~~~l  120 (371)
T cd05622          42 AEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANS-PWVVQLFYAFQDDRYLYM  120 (371)
T ss_pred             hhhcEEEEEEeecCCeEEEEEEECCCCcEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCC-CCCCeEEEEEEcCCEEEE
Confidence            45677889999999999999999999999999999764322 2223347788999999988 999999999999999999


Q ss_pred             EEeccCcccHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          83 LLELLTSAVDSKIRESFGSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        83 v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      ||||+++++|.++++. ..+++..+..++.|++.|++|||+.++
T Consensus       121 v~Ey~~gg~L~~~~~~-~~~~~~~~~~~~~qi~~aL~~LH~~~i  163 (371)
T cd05622         121 VMEYMPGGDLVNLMSN-YDVPEKWARFYTAEVVLALDAIHSMGF  163 (371)
T ss_pred             EEcCCCCCcHHHHHHh-cCCCHHHHHHHHHHHHHHHHHHHHCCE
Confidence            9999999999988875 458999999999999999999998764

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an

>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta

Probab=99.87  E-value=9.6e-21  Score=124.06  Aligned_cols=116  Identities=15%  Similarity=0.062  Sum_probs=98.3

Q ss_pred             eeccCccceeEEEEEEccCCcEEEEEEeecCCCC-chhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeEEEEEeccCc
Q psy8006          11 IINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRS-TDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLLELLTS   89 (126)
Q Consensus        11 ~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~-~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~~lv~e~~~~   89 (126)
                      +.||+|+||.||++.+..++..+|+|.+...... .........|..++....+||+++++++.+...+..+++|||+++
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~ey~~~   80 (316)
T cd05619           1 KMLGKGSFGKVFLAELKGTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHLYCTFQTKENLFFVMEYLNG   80 (316)
T ss_pred             CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCcCcceEEEEEeCCEEEEEEeCCCC
Confidence            4689999999999999999999999999875421 122334667777777653349999999999999999999999999


Q ss_pred             ccHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          90 AVDSKIRESFGSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        90 ~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      ++|..++.....+++..+..++.|++.|++|||+.++
T Consensus        81 g~L~~~l~~~~~~~~~~~~~~~~qi~~al~~LH~~~i  117 (316)
T cd05619          81 GDLMFHIQSCHKFDLPRATFYAAEIICGLQFLHSKGI  117 (316)
T ss_pred             CcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCe
Confidence            9999998877789999999999999999999998764

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in

>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2

Probab=99.87  E-value=2.4e-20  Score=122.82  Aligned_cols=118  Identities=14%  Similarity=0.204  Sum_probs=105.8

Q ss_pred             ccccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeEEEEE
Q psy8006           5 KNIISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLL   84 (126)
Q Consensus         5 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~~lv~   84 (126)
                      ++|...+.||+|+||.||++.+..++..+|+|.+..... ......+.+|+.++.+++| ||++++++.+..++..+++|
T Consensus         5 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~-~~~~~~~~~E~~~l~~l~h-~~iv~~~~~~~~~~~~~lv~   82 (331)
T cd06649           5 DDFERISELGAGNGGVVTKVQHKPSGLIMARKLIHLEIK-PAIRNQIIRELQVLHECNS-PYIVGFYGAFYSDGEISICM   82 (331)
T ss_pred             ccceEEEeecCCCCEEEEEEEECCCCcEEEEEEeecccC-HHHHHHHHHHHHHHHHCCC-CCCCeEEEEEEECCEEEEEe
Confidence            567788899999999999999999999999999986532 2334568999999999998 99999999999999999999


Q ss_pred             eccCcccHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhhcc
Q psy8006          85 ELLTSAVDSKIRESFGSKSESGVQNCLEPSISVFSSLSKF  124 (126)
Q Consensus        85 e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~l~~~  124 (126)
                      ||+++++|.+++.....+++..+..++.|++.|+.|||..
T Consensus        83 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~  122 (331)
T cd06649          83 EHMDGGSLDQVLKEAKRIPEEILGKVSIAVLRGLAYLREK  122 (331)
T ss_pred             ecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHhhc
Confidence            9999999999998777899999999999999999999964

Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst

>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta

Probab=99.87  E-value=9.7e-21  Score=124.03  Aligned_cols=116  Identities=16%  Similarity=0.099  Sum_probs=98.7

Q ss_pred             eeccCccceeEEEEEEccCCcEEEEEEeecCCCC-chhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeEEEEEeccCc
Q psy8006          11 IINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRS-TDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLLELLTS   89 (126)
Q Consensus        11 ~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~-~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~~lv~e~~~~   89 (126)
                      +.||+|+||.||++.+..++..+|+|.+...... .........|..++....+||+++++++.+...+..|+||||+.+
T Consensus         1 ~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E~~~~   80 (316)
T cd05620           1 KVLGKGSFGKVLLAELKGKGEYFAVKALKKDVVLIDDDVECTMVEKRVLALAWENPFLTHLYCTFQTKEHLFFVMEFLNG   80 (316)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCCccCeeEEEEeCCEEEEEECCCCC
Confidence            4689999999999999999999999999865321 122334667777777654449999999999999999999999999


Q ss_pred             ccHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          90 AVDSKIRESFGSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        90 ~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      ++|..++..+..+++..+..++.|++.|++|||+.++
T Consensus        81 g~L~~~i~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i  117 (316)
T cd05620          81 GDLMFHIQDKGRFDLYRATFYAAEIVCGLQFLHSKGI  117 (316)
T ss_pred             CcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence            9998888877789999999999999999999998764

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I

>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase

Probab=99.86  E-value=1.8e-20  Score=122.02  Aligned_cols=121  Identities=18%  Similarity=0.225  Sum_probs=102.5

Q ss_pred             ccccccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeEEE
Q psy8006           3 NIKNIISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMIL   82 (126)
Q Consensus         3 ~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~~l   82 (126)
                      ..++|...+.||+|+||.||+|.+..++..+|+|.+...... .......+|+.+++.++| ||++++++.+..+...++
T Consensus         3 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~-~~~~~~~~E~~~l~~l~h-~niv~~~~~~~~~~~~~l   80 (303)
T cd07869           3 KADSYEKLEKLGEGSYATVYKGKSKVNGKLVALKVIRLQEEE-GTPFTAIREASLLKGLKH-ANIVLLHDIIHTKETLTL   80 (303)
T ss_pred             ccccceEeeeEEecCCEEEEEEEECCCCCEEEEEEecccccc-ccchhHHHHHHHHhhCCC-CCcCeEEEEEecCCeEEE
Confidence            456788889999999999999999999999999999754322 222357789999999998 999999999999999999


Q ss_pred             EEeccCcccHHHHHHh-cCCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          83 LLELLTSAVDSKIRES-FGSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        83 v~e~~~~~~L~~~~~~-~~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      ||||++++ +.+++.. ...+++..+..++.|++.|++|||+.++
T Consensus        81 v~e~~~~~-l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i  124 (303)
T cd07869          81 VFEYVHTD-LCQYMDKHPGGLHPENVKLFLFQLLRGLSYIHQRYI  124 (303)
T ss_pred             EEECCCcC-HHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence            99999765 6665543 4568999999999999999999998764

Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an

>KOG0660|consensus

Probab=99.86  E-value=1.9e-21  Score=125.30  Aligned_cols=118  Identities=19%  Similarity=0.223  Sum_probs=104.6

Q ss_pred             ccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEe-----CCeEE
Q psy8006           7 IISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFES-----SHDMI   81 (126)
Q Consensus         7 ~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~-----~~~~~   81 (126)
                      |...+.+|+|++|.|+.+.+..+|..||+|.+..........++..||+.+++.++| +||+.+.+.+..     -..+|
T Consensus        24 y~~~~~iG~GAyGvVcsA~~~~t~~~VAIKKi~~~F~~~~~akRtlRElklLr~~~H-eNIi~l~di~~p~~~~~f~DvY  102 (359)
T KOG0660|consen   24 YVLIEPIGRGAYGVVCSAKDKRTGEKVAIKKILNPFENQIDAKRTLRELKLLRHLRH-ENIIGLLDIFRPPSRDKFNDVY  102 (359)
T ss_pred             ecccccccCcceeeEEEEEEcCCCCEeehhhhhhhhhchHHHHHHHHHHHHHHHhcC-CCcceEEeecccccccccceeE
Confidence            444688999999999999999999999999998766555666789999999999998 999999999865     33699


Q ss_pred             EEEeccCcccHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          82 LLLELLTSAVDSKIRESFGSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        82 lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      +|+|+|+.+ |.++++.+..+++..++.++.|++.|+.|+|..++
T Consensus       103 iV~elMetD-L~~iik~~~~L~d~H~q~f~YQiLrgLKyiHSAnV  146 (359)
T KOG0660|consen  103 LVFELMETD-LHQIIKSQQDLTDDHAQYFLYQILRGLKYIHSANV  146 (359)
T ss_pred             EehhHHhhH-HHHHHHcCccccHHHHHHHHHHHHHhcchhhcccc
Confidence            999999777 99999987779999999999999999999998763

>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants

Probab=99.86  E-value=1.5e-20  Score=123.75  Aligned_cols=118  Identities=17%  Similarity=0.203  Sum_probs=99.6

Q ss_pred             ccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCC-----eEE
Q psy8006           7 IISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSH-----DMI   81 (126)
Q Consensus         7 ~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~-----~~~   81 (126)
                      |...+.||+|+||.||++.+..++..+|+|.+............+.+|+.+++.++| ||++++++++....     ..|
T Consensus         2 y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h-pniv~~~~~~~~~~~~~~~~~~   80 (338)
T cd07859           2 YKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKINDVFEHVSDATRILREIKLLRLLRH-PDIVEIKHIMLPPSRREFKDIY   80 (338)
T ss_pred             eEEEEEEeecCCeEEEEEEECCCCCEEEEEEechhhccchhHHHHHHHHHHHHhCCC-CCEeeecceEeccCCCCCceEE
Confidence            556788999999999999999999999999987543333334468899999999998 99999998875432     489


Q ss_pred             EEEeccCcccHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          82 LLLELLTSAVDSKIRESFGSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        82 lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      ++|||+++ +|.+++.....+++..+..++.|++.|+.|||+.++
T Consensus        81 lv~e~~~~-~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~~i  124 (338)
T cd07859          81 VVFELMES-DLHQVIKANDDLTPEHHQFFLYQLLRALKYIHTANV  124 (338)
T ss_pred             EEEecCCC-CHHHHHHhcccCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence            99999975 588888877789999999999999999999998764

Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos

>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase

Probab=99.86  E-value=1.2e-20  Score=123.89  Aligned_cols=115  Identities=18%  Similarity=0.229  Sum_probs=97.3

Q ss_pred             eeccCccceeEEEEEEccCCcEEEEEEeecCCCC-chhHHHHHHHHH-HHHHhcCCCCceeeeeeeEeCCeEEEEEeccC
Q psy8006          11 IINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRS-TDLKAEILHEVA-VLEACRCNSRIVQLHQVFESSHDMILLLELLT   88 (126)
Q Consensus        11 ~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~-~~~~~~~~~e~~-~l~~~~~~~~iv~l~~~~~~~~~~~lv~e~~~   88 (126)
                      +.||+|+||.||++.+..++..+|+|.+...... ......+..|.. ++..++| |||+++++.+...+..++||||++
T Consensus         1 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~~l~h-p~iv~~~~~~~~~~~~~lv~e~~~   79 (323)
T cd05575           1 KVIGKGSFGKVLLAKHKADGKFYAVKVLQKKAILKKKEQKHIMAERNVLLKNVKH-PFLVGLHYSFQTADKLYFVLDYVN   79 (323)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhhCCC-CCCCCeeEEEEeCCEEEEEEcCCC
Confidence            4689999999999999999999999999865332 122234555555 4566787 999999999999999999999999


Q ss_pred             cccHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          89 SAVDSKIRESFGSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        89 ~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      +++|..++.....+++..+..++.|++.|++|||+.++
T Consensus        80 ~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~gi  117 (323)
T cd05575          80 GGELFFHLQRERSFPEPRARFYAAEIASALGYLHSLNI  117 (323)
T ss_pred             CCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence            99999888877789999999999999999999998764

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr

>KOG0197|consensus

Probab=99.86  E-value=5e-21  Score=128.10  Aligned_cols=113  Identities=13%  Similarity=0.102  Sum_probs=99.4

Q ss_pred             cceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeEEEEEecc
Q psy8006           8 ISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLLELL   87 (126)
Q Consensus         8 ~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~~lv~e~~   87 (126)
                      ...+.||+|.||.|+.|....+ ..+|+|.+....+..   ..+.+|+.+|++++| ++||++++++..++.+|||||||
T Consensus       209 ~l~~~LG~G~FG~V~~g~~~~~-~~vavk~ik~~~m~~---~~f~~Ea~iMk~L~H-~~lV~l~gV~~~~~piyIVtE~m  283 (468)
T KOG0197|consen  209 KLIRELGSGQFGEVWLGKWNGS-TKVAVKTIKEGSMSP---EAFLREAQIMKKLRH-EKLVKLYGVCTKQEPIYIVTEYM  283 (468)
T ss_pred             HHHHHhcCCccceEEEEEEcCC-CcccceEEeccccCh---hHHHHHHHHHHhCcc-cCeEEEEEEEecCCceEEEEEec
Confidence            3456899999999999998653 468999998865543   368899999999999 99999999999988999999999


Q ss_pred             CcccHHHHHHh--cCCCCHHHHHHHHHHHHHHHHhhhccC
Q psy8006          88 TSAVDSKIRES--FGSKSESGVQNCLEPSISVFSSLSKFE  125 (126)
Q Consensus        88 ~~~~L~~~~~~--~~~~~~~~~~~~~~qi~~~l~~l~~~~  125 (126)
                      +.|+|.++++.  +..++..+.+.++.||+++++||+.+.
T Consensus       284 ~~GsLl~yLr~~~~~~l~~~~Ll~~a~qIaeGM~YLes~~  323 (468)
T KOG0197|consen  284 PKGSLLDYLRTREGGLLNLPQLLDFAAQIAEGMAYLESKN  323 (468)
T ss_pred             ccCcHHHHhhhcCCCccchHHHHHHHHHHHHHHHHHHhCC
Confidence            99999999986  457899999999999999999999865

>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2

Probab=99.86  E-value=1.3e-20  Score=123.59  Aligned_cols=115  Identities=17%  Similarity=0.216  Sum_probs=97.2

Q ss_pred             eeccCccceeEEEEEEccCCcEEEEEEeecCCCCc-hhHHHHHHHHH-HHHHhcCCCCceeeeeeeEeCCeEEEEEeccC
Q psy8006          11 IINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRST-DLKAEILHEVA-VLEACRCNSRIVQLHQVFESSHDMILLLELLT   88 (126)
Q Consensus        11 ~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~-~~~~~~~~e~~-~l~~~~~~~~iv~l~~~~~~~~~~~lv~e~~~   88 (126)
                      ++||+|+||.||++.+..++..+|+|.+....... .....+.+|.. +++.++| |||+++++.+...+..|+||||++
T Consensus         1 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h-~~iv~~~~~~~~~~~~~lv~e~~~   79 (321)
T cd05603           1 KVIGKGSFGKVLLAKRKSDGSFYAVKVLQKKTILKKKEQNHIMAERNVLLKNLKH-PFLVGLHYSFQTAEKLYFVLDYVN   79 (321)
T ss_pred             CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHHhCCC-CCccceeeEEEcCCEEEEEEcCCC
Confidence            46899999999999999999999999998654322 22334555654 5677787 999999999999999999999999


Q ss_pred             cccHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          89 SAVDSKIRESFGSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        89 ~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      +++|...+.....+++..+..++.|++.|++|||..++
T Consensus        80 ~~~L~~~l~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i  117 (321)
T cd05603          80 GGELFFHLQRERCFLEPRARFYAAEVASAIGYLHSLNI  117 (321)
T ss_pred             CCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence            99998888777789999999999999999999998764

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.

>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha

Probab=99.86  E-value=1.9e-20  Score=123.05  Aligned_cols=116  Identities=11%  Similarity=0.167  Sum_probs=100.9

Q ss_pred             eeeccCc--cceeEEEEEEccCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeEEEEEecc
Q psy8006          10 SIINDMG--KYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLLELL   87 (126)
Q Consensus        10 ~~~lg~g--~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~~lv~e~~   87 (126)
                      .++||+|  +|+.||++.+..++..+|+|.++...........+.+|+.+++.++| |||+++++.+..++..++||||+
T Consensus         3 ~~~ig~G~~~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h-pniv~~~~~~~~~~~~~lv~e~~   81 (327)
T cd08227           3 LTVIGRGFEDLMTVNLARYKPTGEYVTVRRINLEACTNEMVTFLQGELHVSKLFNH-PNIVPYRATFIADNELWVVTSFM   81 (327)
T ss_pred             hhhccccccceEEEEEEeecccCcEEEEEEechhhccHHHHHHHHHHHHHHHhcCC-CCeeeEEEEEEECCEEEEEEecc
Confidence            3578998  68899999999999999999998765444444467889999999998 99999999999999999999999


Q ss_pred             CcccHHHHHHhc--CCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          88 TSAVDSKIRESF--GSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        88 ~~~~L~~~~~~~--~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      ++++|.+++...  ..+++..+..++.|++.|++|||+.++
T Consensus        82 ~~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~i  122 (327)
T cd08227          82 AYGSAKDLICTHFMDGMSELAIAYILQGVLKALDYIHHMGY  122 (327)
T ss_pred             CCCcHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCE
Confidence            999999888642  458999999999999999999998763

Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype

>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1

Probab=99.86  E-value=3.3e-20  Score=122.30  Aligned_cols=119  Identities=16%  Similarity=0.206  Sum_probs=105.7

Q ss_pred             cccccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeEEEE
Q psy8006           4 IKNIISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILL   83 (126)
Q Consensus         4 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~~lv   83 (126)
                      -++|...+.||+|+||.||++.+..++..+|+|.+..... ......+.+|+.++..++| |||+++++.+..++..+++
T Consensus         4 ~~~y~~~~~lg~g~~g~V~~~~~~~~~~~~a~k~~~~~~~-~~~~~~~~~E~~~l~~l~h-~~iv~~~~~~~~~~~~~lv   81 (333)
T cd06650           4 DDDFEKISELGAGNGGVVFKVSHKPSGLIMARKLIHLEIK-PAIRNQIIRELQVLHECNS-PYIVGFYGAFYSDGEISIC   81 (333)
T ss_pred             hhhhheeccccCCCCEEEEEEEECCCCcEEEEEEeecccC-HHHHHHHHHHHHHHHHCCC-CcccceeEEEEECCEEEEE
Confidence            3567788899999999999999999999999999876532 2334468899999999998 9999999999999999999


Q ss_pred             EeccCcccHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhhcc
Q psy8006          84 LELLTSAVDSKIRESFGSKSESGVQNCLEPSISVFSSLSKF  124 (126)
Q Consensus        84 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~l~~~  124 (126)
                      |||+++++|.+++.....+++..+..++.|++.|+.|||..
T Consensus        82 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~l~~~l~~lH~~  122 (333)
T cd06650          82 MEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREK  122 (333)
T ss_pred             EecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhc
Confidence            99999999999998777899999999999999999999963

Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst

>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1

Probab=99.86  E-value=1.8e-20  Score=120.80  Aligned_cols=113  Identities=21%  Similarity=0.206  Sum_probs=96.8

Q ss_pred             ccCccceeEEEEEEccCCcEEEEEEeecCCCCch-hHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeEEEEEeccCccc
Q psy8006          13 NDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTD-LKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLLELLTSAV   91 (126)
Q Consensus        13 lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~-~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~~lv~e~~~~~~   91 (126)
                      ||+|+||.||++.+..++..+|+|.+........ ....+..|+.+++.++| |+++++.+.+......+++|||+++++
T Consensus         1 lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~-~~i~~~~~~~~~~~~~~lv~e~~~~g~   79 (280)
T cd05608           1 LGKGGFGEVSACQMRATGKLYACKKLNKKRLKKRKGYEGAMVEKRILAKVHS-RFIVSLAYAFQTKTDLCLVMTIMNGGD   79 (280)
T ss_pred             CCCCCceeEEEEEEccCCcEEEEEeeeHHHHhhhHHHHHHHHHHHHHHhCCC-CcEeeeeEEEcCCCeEEEEEeCCCCCC
Confidence            6899999999999999999999999986543222 23457789999999988 999999999998999999999999999


Q ss_pred             HHHHHH----hcCCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          92 DSKIRE----SFGSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        92 L~~~~~----~~~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      |...+.    ....+++..+..++.|++.|++|||+.++
T Consensus        80 L~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i  118 (280)
T cd05608          80 LRYHIYNVDEENPGFPEPRACFYTAQIISGLEHLHQRRI  118 (280)
T ss_pred             HHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHCCc
Confidence            977663    23468999999999999999999998764

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g

>KOG4717|consensus

Probab=99.86  E-value=2.1e-21  Score=131.02  Aligned_cols=117  Identities=18%  Similarity=0.196  Sum_probs=107.4

Q ss_pred             ccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeEEEEEec
Q psy8006           7 IISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLLEL   86 (126)
Q Consensus         7 ~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~~lv~e~   86 (126)
                      |-.++.||+|-|+.|..|++--+|..||||++++..++.-....+.+|+.+|+-++| ||||++|+.+.++..+||++|+
T Consensus        20 YDLekTlG~GHFAVVKLArHVFTGekVAVKviDKTKlD~~st~hlfqEVRCMKLVQH-pNiVRLYEViDTQTKlyLiLEL   98 (864)
T KOG4717|consen   20 YDLEKTLGRGHFAVVKLARHVFTGEKVAVKVIDKTKLDTLSTGHLFQEVRCMKLVQH-PNIVRLYEVIDTQTKLYLILEL   98 (864)
T ss_pred             ehhhhhhcCCceehhhhhhhhcccceeEEEEecccccchhhhhHHHHHHHHHHHhcC-cCeeeeeehhcccceEEEEEEe
Confidence            445778999999999999999999999999999998877667779999999999999 9999999999999999999999


Q ss_pred             cCcccHHHHH-HhcCCCCHHHHHHHHHHHHHHHHhhhcc
Q psy8006          87 LTSAVDSKIR-ESFGSKSESGVQNCLEPSISVFSSLSKF  124 (126)
Q Consensus        87 ~~~~~L~~~~-~~~~~~~~~~~~~~~~qi~~~l~~l~~~  124 (126)
                      -++|+|++++ +....+.|..+.++|.||+.|+.|-|++
T Consensus        99 GD~GDl~DyImKHe~Gl~E~La~kYF~QI~~AI~YCHqL  137 (864)
T KOG4717|consen   99 GDGGDLFDYIMKHEEGLNEDLAKKYFAQIVHAISYCHQL  137 (864)
T ss_pred             cCCchHHHHHHhhhccccHHHHHHHHHHHHHHHHHHhhh
Confidence            9999998877 4556799999999999999999999986

>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10

Probab=99.86  E-value=1.8e-20  Score=119.92  Aligned_cols=120  Identities=20%  Similarity=0.201  Sum_probs=101.8

Q ss_pred             ccccceeeccCccceeEEEEEEc---cCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeEE
Q psy8006           5 KNIISSIINDMGKYATVRRCRDR---KNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMI   81 (126)
Q Consensus         5 ~~~~~~~~lg~g~~~~v~~~~~~---~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~~   81 (126)
                      .+|...+.||+|+||.||++...   ..+..+|+|.++.... ......+.+|+..+.+++| ||++++++.+..++..+
T Consensus         5 ~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vaik~~~~~~~-~~~~~~~~~e~~~l~~l~h-~~iv~~~~~~~~~~~~~   82 (266)
T cd05064           5 KSIKIERILGTGRFGELCRGCLKLPSKRELPVAIHTLRAGCS-DKQRRGFLAEALTLGQFDH-SNIVRLEGVITRGNTMM   82 (266)
T ss_pred             HHeEEeeeecccCCCeEEEEEEecCCCceeeEEEEecCCCCC-HHHHHHHHHHHHHHhcCCC-CCcCeEEEEEecCCCcE
Confidence            45777889999999999999764   3456899999876532 2333468899999999998 99999999999889999


Q ss_pred             EEEeccCcccHHHHHHhc-CCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          82 LLLELLTSAVDSKIRESF-GSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        82 lv~e~~~~~~L~~~~~~~-~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      +||||+++++|.+++... ..+++..+..++.|++.|++|||+.++
T Consensus        83 lv~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~i~~al~~lH~~~i  128 (266)
T cd05064          83 IVTEYMSNGALDSFLRKHEGQLVAGQLMGMLPGLASGMKYLSEMGY  128 (266)
T ss_pred             EEEEeCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCE
Confidence            999999999999888763 578999999999999999999998763

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor

>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase

Probab=99.86  E-value=2.6e-20  Score=120.54  Aligned_cols=121  Identities=17%  Similarity=0.221  Sum_probs=106.5

Q ss_pred             ccccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCc-hhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeEEEE
Q psy8006           5 KNIISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRST-DLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILL   83 (126)
Q Consensus         5 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~-~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~~lv   83 (126)
                      ++|...+.||+|++|.||.+.+..++..+|+|.+....... .....+.+|+.+++.++| ||++++++.+......+++
T Consensus         1 ~~y~~~~~ig~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h-~~i~~~~~~~~~~~~~~~v   79 (290)
T cd05580           1 DDFEFIKTLGTGSFGRVMLVRHKGSGKYYALKILSKAKIVKLKQVEHVLNEKRILQSIRH-PFLVNLYGSFQDDSNLYLV   79 (290)
T ss_pred             CceEEEEEeecCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCC-CCccceeeEEEcCCeEEEE
Confidence            35677889999999999999999999999999997654322 233458899999999998 9999999999999999999


Q ss_pred             EeccCcccHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          84 LELLTSAVDSKIRESFGSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        84 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      |||+++++|.+++.....+++..+..++.|++.|++|||+.++
T Consensus        80 ~e~~~~~~L~~~~~~~~~l~~~~~~~~~~qil~~l~~lH~~~i  122 (290)
T cd05580          80 MEYVPGGELFSHLRKSGRFPEPVARFYAAQVVLALEYLHSLDI  122 (290)
T ss_pred             EecCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCE
Confidence            9999999999999887889999999999999999999998763

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi

>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase

Probab=99.86  E-value=1.3e-20  Score=125.76  Aligned_cols=119  Identities=16%  Similarity=0.174  Sum_probs=101.6

Q ss_pred             cccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCC-----eE
Q psy8006           6 NIISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSH-----DM   80 (126)
Q Consensus         6 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~-----~~   80 (126)
                      +|...+.||+|+||.||++.+..++..+|+|.+............+.+|+.++..++| ||++++++.+..++     ..
T Consensus         1 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h-~niv~~~~~~~~~~~~~~~~~   79 (372)
T cd07853           1 DVEPDRPIGYGAFGVVWSVTDPRDGKRVALKKMPNVFQNLVSCKRVFRELKMLCFFKH-DNVLSALDILQPPHIDPFEEI   79 (372)
T ss_pred             CCcccceeeeCCCEEEEEEEECCCCCEEEEEeccccccchHHHHHHHHHHHHHHhCCC-CCcCCHhheecCCCccccceE
Confidence            3567789999999999999999999999999987543333334568899999999998 99999999988766     78


Q ss_pred             EEEEeccCcccHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          81 ILLLELLTSAVDSKIRESFGSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        81 ~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      |+++||+.++ |.+.+.....+++..+..++.|++.|++|||+.++
T Consensus        80 ~lv~e~~~~~-l~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~i  124 (372)
T cd07853          80 YVVTELMQSD-LHKIIVSPQPLSSDHVKVFLYQILRGLKYLHSAGI  124 (372)
T ss_pred             EEEeeccccC-HHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCe
Confidence            9999999865 77777766789999999999999999999999864

Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription

>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3

Probab=99.86  E-value=2.3e-20  Score=122.66  Aligned_cols=115  Identities=19%  Similarity=0.227  Sum_probs=97.4

Q ss_pred             eeccCccceeEEEEEEccCCcEEEEEEeecCCCC-chhHHHHHHHHHH-HHHhcCCCCceeeeeeeEeCCeEEEEEeccC
Q psy8006          11 IINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRS-TDLKAEILHEVAV-LEACRCNSRIVQLHQVFESSHDMILLLELLT   88 (126)
Q Consensus        11 ~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~-~~~~~~~~~e~~~-l~~~~~~~~iv~l~~~~~~~~~~~lv~e~~~   88 (126)
                      +.||+|+||.||++.+..++..+|+|++...... ......+..|... ++.++| |||+++++.+...+..|++|||++
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h-p~iv~~~~~~~~~~~~~lv~e~~~   79 (325)
T cd05604           1 KVIGKGSFGKVLLAKRKLDGKCYAVKVLQKKIVLNRKEQKHIMAERNVLLKNVKH-PFLVGLHYSFQTTEKLYFVLDFVN   79 (325)
T ss_pred             CceeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHHhCCC-CCCccEEEEEecCCEEEEEEcCCC
Confidence            4689999999999999999999999999865332 2223345566554 566777 999999999999999999999999


Q ss_pred             cccHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          89 SAVDSKIRESFGSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        89 ~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      +++|..++.....+++..+..++.|++.|++|||+.++
T Consensus        80 ~~~L~~~l~~~~~~~~~~~~~~~~qi~~al~~lH~~gi  117 (325)
T cd05604          80 GGELFFHLQRERSFPEPRARFYAAEIASALGYLHSINI  117 (325)
T ss_pred             CCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence            99998888877789999999999999999999999864

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,

>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase

Probab=99.86  E-value=3.4e-20  Score=119.95  Aligned_cols=121  Identities=20%  Similarity=0.212  Sum_probs=103.5

Q ss_pred             ccccccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeEEE
Q psy8006           3 NIKNIISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMIL   82 (126)
Q Consensus         3 ~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~~l   82 (126)
                      .+.+|...+.||+|+||.||+|.+..++..+|+|.+...... .....+.+|+.++..++| ||++++++.+......++
T Consensus         3 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~E~~~l~~l~h-~niv~~~~~~~~~~~~~l   80 (288)
T cd07871           3 KLETYVKLDKLGEGTYATVFKGRSKLTENLVALKEIRLEHEE-GAPCTAIREVSLLKNLKH-ANIVTLHDIIHTERCLTL   80 (288)
T ss_pred             ccccceEeeEEecCCCEEEEEEEECCCCCEEEEEEecccccC-CcchhHHHHHHHHHhCCC-CCEeeEEEEEcCCCeEEE
Confidence            467788899999999999999999999999999999755322 223357789999999998 999999999998889999


Q ss_pred             EEeccCcccHHHHHHhc-CCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          83 LLELLTSAVDSKIRESF-GSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        83 v~e~~~~~~L~~~~~~~-~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      ||||+++ +|.+++... ..+++..+..++.|++.|++|||+.++
T Consensus        81 v~e~~~~-~l~~~l~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~i  124 (288)
T cd07871          81 VFEYLDS-DLKQYLDNCGNLMSMHNVKIFMFQLLRGLSYCHKRKI  124 (288)
T ss_pred             EEeCCCc-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCc
Confidence            9999987 587777643 458899999999999999999998764

Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament

>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5

Probab=99.86  E-value=4.8e-20  Score=117.85  Aligned_cols=121  Identities=17%  Similarity=0.185  Sum_probs=106.1

Q ss_pred             ccccccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeEEE
Q psy8006           3 NIKNIISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMIL   82 (126)
Q Consensus         3 ~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~~l   82 (126)
                      ...+|...+.||+|+||.||++.+..++..+|+|.+.....  .....+.+|+.++.+++| ||++++++.+...+..++
T Consensus         7 ~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~--~~~~~~~~e~~~l~~~~h-~~ii~~~~~~~~~~~~~i   83 (267)
T cd06646           7 PQHDYELIQRVGSGTYGDVYKARNLHTGELAAVKIIKLEPG--DDFSLIQQEIFMVKECKH-CNIVAYFGSYLSREKLWI   83 (267)
T ss_pred             chhhcchhheeecCCCeEEEEEEECCCCeEEEEEEEecCcc--chHHHHHHHHHHHHhcCC-CCeeeeeEEEEeCCEEEE
Confidence            34567888999999999999999999999999999975432  223357889999999999 999999999999999999


Q ss_pred             EEeccCcccHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          83 LLELLTSAVDSKIRESFGSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        83 v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      ++||+++++|.+++..+..+++..+..++.|++.|++|||+.++
T Consensus        84 v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i  127 (267)
T cd06646          84 CMEYCGGGSLQDIYHVTGPLSELQIAYVCRETLQGLAYLHSKGK  127 (267)
T ss_pred             EEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCc
Confidence            99999999999888877789999999999999999999998764

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9

Probab=99.86  E-value=5.9e-20  Score=116.73  Aligned_cols=120  Identities=15%  Similarity=0.115  Sum_probs=106.6

Q ss_pred             cccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeEEEEEe
Q psy8006           6 NIISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLLE   85 (126)
Q Consensus         6 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~~lv~e   85 (126)
                      +|...+++|+|+||.|+.+.+..++..+++|.+............+.+|++++++++| +|++++++.+...+..+++||
T Consensus         1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~~~h-~~i~~~~~~~~~~~~~~~~~e   79 (256)
T cd08221           1 HYIPIRVLGKGAFGEATLYRRTEDDSLVVWKEVNLTRLSEKERRDALNEIVILSLLQH-PNIIAYYNHFMDDNTLLIEME   79 (256)
T ss_pred             CceEeeEecccCCceEEEEEEcCCCcEEEEEEEeecccchhHHHHHHHHHHHHHhCCC-CCeeEEEeEEecCCeEEEEEE
Confidence            4667889999999999999999999999999998766555555568899999999998 999999999999999999999


Q ss_pred             ccCcccHHHHHHhc--CCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          86 LLTSAVDSKIRESF--GSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        86 ~~~~~~L~~~~~~~--~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      |+++++|.+++...  ..+++..+..++.|++.++.|||+.++
T Consensus        80 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i  122 (256)
T cd08221          80 YANGGTLYDKIVRQKGQLFEEEMVLWYLFQIVSAVSYIHKAGI  122 (256)
T ss_pred             ecCCCcHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhCCc
Confidence            99999999888764  468999999999999999999998763

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa

>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4

Probab=99.86  E-value=4.4e-20  Score=118.90  Aligned_cols=120  Identities=18%  Similarity=0.263  Sum_probs=104.3

Q ss_pred             cccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeEEEEEe
Q psy8006           6 NIISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLLE   85 (126)
Q Consensus         6 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~~lv~e   85 (126)
                      +|...+.||+|++|.||++.+..++..+|+|.+..........+.+.+|+.++..++| ||++++.+.+..+...+++||
T Consensus         2 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~h-~~i~~~~~~~~~~~~~~~v~e   80 (286)
T cd07847           2 KYEKLSKIGEGSYGVVFKCRNRETGQIVAIKKFVESEDDPVIKKIALREIRMLKQLKH-PNLVNLIEVFRRKRKLHLVFE   80 (286)
T ss_pred             ceeeeeeecccCCeEEEEEEECCCCcEEEEEEEeecccCccccHHHHHHHHHHHhCCC-CCEeeeeeEEeeCCEEEEEEe
Confidence            5667788999999999999999899999999987654333333457899999999998 999999999999999999999


Q ss_pred             ccCcccHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          86 LLTSAVDSKIRESFGSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        86 ~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      |++++++..+......+++..+..++.|++.+++|||+.++
T Consensus        81 ~~~~~~l~~~~~~~~~~~~~~~~~~~~ql~~~l~~LH~~~i  121 (286)
T cd07847          81 YCDHTVLNELEKNPRGVPEHLIKKIIWQTLQAVNFCHKHNC  121 (286)
T ss_pred             ccCccHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCc
Confidence            99999888777666679999999999999999999998764

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio

>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity

Probab=99.86  E-value=1.7e-20  Score=119.30  Aligned_cols=119  Identities=18%  Similarity=0.246  Sum_probs=105.1

Q ss_pred             ccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeEEEEEec
Q psy8006           7 IISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLLEL   86 (126)
Q Consensus         7 ~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~~lv~e~   86 (126)
                      |...+.||+|+||.||++.+..++..+|+|.+..............+|+..+..++| |+++++.+.+......+++||+
T Consensus         1 y~~~~~lg~G~~g~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~~~~l~~-~~i~~~~~~~~~~~~~~~v~~~   79 (260)
T PF00069_consen    1 YRLVKKLGSGGFGTVYKAKNKKNGQKVAVKIIDKSEIEEEEREENIREIKILRRLRH-PNIVQILDVFQDDNYLYIVMEY   79 (260)
T ss_dssp             EEEEEEEEEESSEEEEEEEETTTTEEEEEEEEESTTHHHHHHHHHHHHHHHHHHHTB-TTBCHEEEEEEESSEEEEEEEE
T ss_pred             CEEeEEEEeCCCEEEEEEEECCCCeEEEEEEeccccccccccchhhhhhhccccccc-cccccccccccccccccccccc
Confidence            455789999999999999999999999999999876544433345669999999987 9999999999999999999999


Q ss_pred             cCcccHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          87 LTSAVDSKIRESFGSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        87 ~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      +++++|.+++.....+++..+..++.|++.|+++||+.++
T Consensus        80 ~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~L~~Lh~~~i  119 (260)
T PF00069_consen   80 CPGGSLQDYLQKNKPLSEEEILKIAYQILEALAYLHSKGI  119 (260)
T ss_dssp             ETTEBHHHHHHHHSSBBHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred             cccccccccccccccccccccccccccccccccccccccc
Confidence            9999999999877789999999999999999999998753

Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....

>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2

Probab=99.86  E-value=3.2e-20  Score=122.18  Aligned_cols=121  Identities=23%  Similarity=0.217  Sum_probs=102.8

Q ss_pred             cccceeeccCccceeEEEEEEc---cCCcEEEEEEeecCCCC--chhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeE
Q psy8006           6 NIISSIINDMGKYATVRRCRDR---KNGTQYAAKFLRKKRRS--TDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDM   80 (126)
Q Consensus         6 ~~~~~~~lg~g~~~~v~~~~~~---~~~~~~aiK~~~~~~~~--~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~   80 (126)
                      +|...+.||+|+||.||++.+.   .++..+|+|.+......  ......+.+|+.++..+++||+++.+++.+...+..
T Consensus         1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~   80 (332)
T cd05614           1 NFELLKVLGTGAYGKVFLVRKVTGHDTGKLYAMKVLQKAALVQKAKTVEHTRTERNVLEHVRQSPFLVTLHYAFQTEAKL   80 (332)
T ss_pred             CceEEEEEeecCCEEEEEEEEcccCCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHHhccCCCCcccEEEEEecCCEE
Confidence            4566789999999999998763   57889999999764321  122345788999999997669999999999999999


Q ss_pred             EEEEeccCcccHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          81 ILLLELLTSAVDSKIRESFGSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        81 ~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      +++|||+++++|.+++..+..+++..+..++.|++.|++|||+.++
T Consensus        81 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i  126 (332)
T cd05614          81 HLILDYVSGGEMFTHLYQRDNFSEDEVRFYSGEIILALEHLHKLGI  126 (332)
T ss_pred             EEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCc
Confidence            9999999999999988877789999999999999999999999764

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph

>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase

Probab=99.86  E-value=5.5e-20  Score=120.03  Aligned_cols=116  Identities=16%  Similarity=0.224  Sum_probs=103.5

Q ss_pred             cccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeEEEEEe
Q psy8006           6 NIISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLLE   85 (126)
Q Consensus         6 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~~lv~e   85 (126)
                      +|...+.||+|+||.||++.+..++..+++|.+..... ......+.+|+.++..++| ||++++++.+..++..++++|
T Consensus         2 ~~~~~~~lg~G~~g~v~~~~~~~~~~~~a~k~~~~~~~-~~~~~~~~~E~~~l~~l~h-~~iv~~~~~~~~~~~~~lv~e   79 (308)
T cd06615           2 DFEKLGELGAGNGGVVTKVLHRPSGLIMARKLIHLEIK-PAIRNQIIRELKVLHECNS-PYIVGFYGAFYSDGEISICME   79 (308)
T ss_pred             CceEEeeccCCCCeEEEEEEEcCCCeEEEEEEeccccC-HHHHHHHHHHHHHHHhCCC-CCCCeEEEEEeeCCEEEEEee
Confidence            56778899999999999999999999999998875432 2334458899999999998 999999999999999999999


Q ss_pred             ccCcccHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhhc
Q psy8006          86 LLTSAVDSKIRESFGSKSESGVQNCLEPSISVFSSLSK  123 (126)
Q Consensus        86 ~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~l~~  123 (126)
                      |+++++|.+++.....+++..+..++.|++.++.|||+
T Consensus        80 y~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~  117 (308)
T cd06615          80 HMDGGSLDQVLKKAGRIPENILGKISIAVLRGLTYLRE  117 (308)
T ss_pred             ccCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHh
Confidence            99999999999877789999999999999999999996

Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down

>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=99.86  E-value=5e-20  Score=117.39  Aligned_cols=121  Identities=16%  Similarity=0.210  Sum_probs=106.5

Q ss_pred             ccccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCch---hHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeEE
Q psy8006           5 KNIISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTD---LKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMI   81 (126)
Q Consensus         5 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~---~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~~   81 (126)
                      ++|...+.||+|++|.||.+.+..++..+++|.+........   ....+.+|+.++++++| ||++++++.+..++..+
T Consensus         2 ~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~lk~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~-~~i~~~~~~~~~~~~~~   80 (263)
T cd06625           2 TNWRRGKLLGQGAFGRVYLCYDVDTGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNLQH-ERIVQYYGCLRDDETLS   80 (263)
T ss_pred             CcccccceecCCCceEEEEEEEcCCCcEEEEEEEeecccchhhHHHHHHHHHHHHHHHhCCC-CCeeeeEEEEccCCeEE
Confidence            467889999999999999999999999999999876543222   23358889999999998 99999999999999999


Q ss_pred             EEEeccCcccHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          82 LLLELLTSAVDSKIRESFGSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        82 lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      +++|++++++|.+++.....+++..+..++.|++.|+.|||+.++
T Consensus        81 ~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i  125 (263)
T cd06625          81 IFMEYMPGGSVKDQLKAYGALTETVTRKYTRQILEGVEYLHSNMI  125 (263)
T ss_pred             EEEEECCCCcHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHhCCe
Confidence            999999999999988877789999999999999999999998764

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t

>KOG0585|consensus

Probab=99.86  E-value=4.9e-21  Score=127.47  Aligned_cols=122  Identities=20%  Similarity=0.225  Sum_probs=102.4

Q ss_pred             ccccccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCc------------hhHHHHHHHHHHHHHhcCCCCceee
Q psy8006           3 NIKNIISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRST------------DLKAEILHEVAVLEACRCNSRIVQL   70 (126)
Q Consensus         3 ~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~------------~~~~~~~~e~~~l~~~~~~~~iv~l   70 (126)
                      .++.|...+.||+|.||.|.+|.+..++..||+|++.+.....            ...+.+.+|+.+|+++.| ||||++
T Consensus        95 ~lNqy~l~~eiG~G~yGkVkLar~~~~~~l~AiKil~K~~~~~~~~~~~~~a~~~~~~ekv~~EIailKkl~H-~nVV~L  173 (576)
T KOG0585|consen   95 QLNQYELIKEIGSGQYGKVKLARDEVDGKLYAIKILPKKELRRQYGFPRQPAMKLMPIEKVRREIAILKKLHH-PNVVKL  173 (576)
T ss_pred             ehhheehhhhhcCCccceEEEEeecCCCcEEEEEeechhhhhhhcccccccccccCcHHHHHHHHHHHHhcCC-cCeeEE
Confidence            4677888999999999999999999999999999998754321            012468899999999999 999999


Q ss_pred             eeeeEeCC--eEEEEEeccCcccHHHHHHhcCC-CCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          71 HQVFESSH--DMILLLELLTSAVDSKIRESFGS-KSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        71 ~~~~~~~~--~~~lv~e~~~~~~L~~~~~~~~~-~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      .++..++.  .+|+|+|||..|.+.+ ...... +++.+++.+++.++.+|+|||-.+|
T Consensus       174 iEvLDDP~s~~~YlVley~s~G~v~w-~p~d~~els~~~Ar~ylrDvv~GLEYLH~Qgi  231 (576)
T KOG0585|consen  174 IEVLDDPESDKLYLVLEYCSKGEVKW-CPPDKPELSEQQARKYLRDVVLGLEYLHYQGI  231 (576)
T ss_pred             EEeecCcccCceEEEEEeccCCcccc-CCCCcccccHHHHHHHHHHHHHHHHHHHhcCe
Confidence            99997654  7999999999996543 333334 9999999999999999999998764

>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha

Probab=99.86  E-value=2.7e-20  Score=122.60  Aligned_cols=120  Identities=15%  Similarity=0.140  Sum_probs=103.1

Q ss_pred             cccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCC-chhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeEEEEE
Q psy8006           6 NIISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRS-TDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLL   84 (126)
Q Consensus         6 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~-~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~~lv~   84 (126)
                      +|...+.||+|+||.||++.+..++..+|+|.+...... ......+..|..++..++| ++++++++.+...+..|+||
T Consensus         2 ~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~-~~i~~~~~~~~~~~~~~lv~   80 (332)
T cd05623           2 DFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDN-QWITTLHYAFQDENNLYLVM   80 (332)
T ss_pred             CceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEeHHHHHHhhHHHHHHHHHHHHhhCCC-CCEeeEEEEEecCCEEEEEE
Confidence            566788999999999999999999999999999754321 2223347788889989888 99999999999999999999


Q ss_pred             eccCcccHHHHHHh-cCCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          85 ELLTSAVDSKIRES-FGSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        85 e~~~~~~L~~~~~~-~~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      ||+++|+|.+++.+ ...+++..++.++.|++.|++|||+.++
T Consensus        81 ey~~~g~L~~~l~~~~~~l~~~~~~~~~~qi~~al~~lH~~~i  123 (332)
T cd05623          81 DYYVGGDLLTLLSKFEDRLPEDMARFYLAEMVIAIDSVHQLHY  123 (332)
T ss_pred             eccCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence            99999999998876 4578999999999999999999998764

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw

>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases

Probab=99.86  E-value=3.9e-20  Score=119.03  Aligned_cols=123  Identities=15%  Similarity=0.200  Sum_probs=108.1

Q ss_pred             CcccccccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeE
Q psy8006           1 MNNIKNIISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDM   80 (126)
Q Consensus         1 ~~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~   80 (126)
                      .|+.++|...+.||+|++|.||++.+..++..+++|.+....  ......+.+|+.++++++| ||++++.+.+..+...
T Consensus         1 ~~~~~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~--~~~~~~~~~e~~~l~~l~h-~~i~~~~~~~~~~~~~   77 (280)
T cd06611           1 VNPNDIWEIIGELGDGAFGKVYKAQHKETGLFAAAKIIQIES--EEELEDFMVEIDILSECKH-PNIVGLYEAYFYENKL   77 (280)
T ss_pred             CCchhHHHHHHHhcCCCCceEEEEEEcCCCcEEEEEEEeeCC--HHHHHHHHHHHHHHHhCCC-CceeEEEEEEecCCeE
Confidence            367788999999999999999999998889999999987542  2233468899999999998 9999999999999999


Q ss_pred             EEEEeccCcccHHHHHHh-cCCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          81 ILLLELLTSAVDSKIRES-FGSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        81 ~lv~e~~~~~~L~~~~~~-~~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      |++|||+++++|.+++.. ...+++..+..++.|++.++.|||+.++
T Consensus        78 ~lv~e~~~~~~L~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~i  124 (280)
T cd06611          78 WILIEFCDGGALDSIMLELERGLTEPQIRYVCRQMLEALNFLHSHKV  124 (280)
T ss_pred             EEEeeccCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCc
Confidence            999999999999888865 3579999999999999999999998764

Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti

>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase

Probab=99.86  E-value=2.6e-20  Score=122.30  Aligned_cols=115  Identities=23%  Similarity=0.207  Sum_probs=99.3

Q ss_pred             eeccCccceeEEEEEEc---cCCcEEEEEEeecCCCC--chhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeEEEEEe
Q psy8006          11 IINDMGKYATVRRCRDR---KNGTQYAAKFLRKKRRS--TDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLLE   85 (126)
Q Consensus        11 ~~lg~g~~~~v~~~~~~---~~~~~~aiK~~~~~~~~--~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~~lv~e   85 (126)
                      +.||+|+||.||++.+.   .++..+|+|.+......  ......+.+|+.++..++| |||+++++.+..++..|++||
T Consensus         2 ~~lg~G~~g~V~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~il~~l~h-p~iv~~~~~~~~~~~~~lv~e   80 (323)
T cd05584           2 KVLGKGGYGKVFQVRKVTGADTGKIFAMKVLKKATIVRNQKDTAHTKAERNILEAVKH-PFIVDLIYAFQTGGKLYLILE   80 (323)
T ss_pred             ceeeecCCeEEEEEEEcccCCCCCEEEEEEEEHHHHHhhhhhHHHHHHHHHHHHhCCC-CchhceeeEEecCCeEEEEEe
Confidence            57999999999999863   56889999999865321  1223457889999999998 999999999999999999999


Q ss_pred             ccCcccHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          86 LLTSAVDSKIRESFGSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        86 ~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      |+++++|.+++.....+++..+..++.|++.|++|||+.++
T Consensus        81 ~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i  121 (323)
T cd05584          81 YLSGGELFMHLEREGIFMEDTACFYLSEISLALEHLHQQGI  121 (323)
T ss_pred             CCCCchHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence            99999999999887889999999999999999999998764

Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in

>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1

Probab=99.86  E-value=1.8e-20  Score=119.31  Aligned_cols=120  Identities=17%  Similarity=0.174  Sum_probs=106.3

Q ss_pred             cccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCc-hhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeEEEEE
Q psy8006           6 NIISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRST-DLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLL   84 (126)
Q Consensus         6 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~-~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~~lv~   84 (126)
                      +|...+.||+|+||.||.+.+..++..+++|.+....... .....+.+|+.++.+++| ||++++++.+..+...++++
T Consensus         1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h-~~i~~~~~~~~~~~~~~lv~   79 (258)
T cd05578           1 HFELLRVIGKGAFGKVCIVQKRDTKKMFAMKYMNKQKCVEKGSVRNVLNERRILQELNH-PFLVNLWYSFQDEENMYLVV   79 (258)
T ss_pred             CceEEEEeccCCCceEEEEEEccCCcEEEEEEEehhhhcchhHHHHHHHHHHHHHhCCC-CChHHHHHhhcCCCeEEEEE
Confidence            4667789999999999999999899999999998754433 334568999999999998 99999999999999999999


Q ss_pred             eccCcccHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          85 ELLTSAVDSKIRESFGSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        85 e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      ||+.+++|.+++....++++..+..++.|+++++.|||+.++
T Consensus        80 e~~~~~~L~~~l~~~~~l~~~~~~~~~~~i~~~l~~lh~~~i  121 (258)
T cd05578          80 DLLLGGDLRYHLSQKVKFSEEQVKFWICEIVLALEYLHSKGI  121 (258)
T ss_pred             eCCCCCCHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHhCCe
Confidence            999999999998876789999999999999999999998763

Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.

>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3

Probab=99.85  E-value=4.8e-20  Score=117.83  Aligned_cols=120  Identities=17%  Similarity=0.200  Sum_probs=106.1

Q ss_pred             cccccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeEEEE
Q psy8006           4 IKNIISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILL   83 (126)
Q Consensus         4 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~~lv   83 (126)
                      ..+|...+.||+|+||.||.+.+..++..+|+|.++....  .....+.+|+.++..++| ||++++++.+...+..|++
T Consensus         8 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~--~~~~~~~~e~~~~~~l~h-~~ii~~~~~~~~~~~~~lv   84 (267)
T cd06645           8 QEDFELIQRIGSGTYGDVYKARNVNTGELAAIKVIKLEPG--EDFAVVQQEIIMMKDCKH-SNIVAYFGSYLRRDKLWIC   84 (267)
T ss_pred             HHHHHHHHHhCCCCCeEEEEEEEcCCCcEEEEEEEecCch--hHHHHHHHHHHHHHhCCC-CCeeeEEEEEEeCCEEEEE
Confidence            4567778899999999999999999999999999876532  223357889999999998 9999999999999999999


Q ss_pred             EeccCcccHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          84 LELLTSAVDSKIRESFGSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        84 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      +||+++++|.+++...+.+++..+..++.|++.+++|||+.++
T Consensus        85 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i  127 (267)
T cd06645          85 MEFCGGGSLQDIYHVTGPLSESQIAYVSRETLQGLYYLHSKGK  127 (267)
T ss_pred             EeccCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence            9999999999998877789999999999999999999998763

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>KOG0594|consensus

Probab=99.85  E-value=1.9e-20  Score=120.38  Aligned_cols=120  Identities=18%  Similarity=0.262  Sum_probs=103.5

Q ss_pred             ccccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCC-ceeeeeeeEeCC-----
Q psy8006           5 KNIISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSR-IVQLHQVFESSH-----   78 (126)
Q Consensus         5 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~-iv~l~~~~~~~~-----   78 (126)
                      .+|..-+.+|+|+||.||+|....+|..||+|.++.....++......+|+.+++.++| +| |+.+++.+.+.+     
T Consensus        11 ~~~~~~eklGeGtyg~Vykar~~~~g~~VALKkirl~~~~EG~P~taiREisllk~L~~-~~~iv~L~dv~~~~~~~~~~   89 (323)
T KOG0594|consen   11 FDYEKVEKLGEGTYGVVYKARSKRTGKFVALKKIRLEFEEEGVPSTAIREISLLKRLSH-ANHIVRLHDVIHTSNNHRGI   89 (323)
T ss_pred             HHHHHHHHhCCCCceEEEEEEEecCCCEEEEEEEeccccccCCCchhhHHHHHHHHhCC-CcceEEEEeeeeeccccccc
Confidence            44666677999999999999999999999999999876544445568899999999999 88 999999998777     


Q ss_pred             -eEEEEEeccCcccHHHHHHhcC----CCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          79 -DMILLLELLTSAVDSKIRESFG----SKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        79 -~~~lv~e~~~~~~L~~~~~~~~----~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                       .+++|+||++.+ |.+++....    .++...++.+++|++.|++|+|..++
T Consensus        90 ~~l~lvfe~~d~D-L~~ymd~~~~~~~g~~~~~ik~~m~Qll~gl~~~H~~~I  141 (323)
T KOG0594|consen   90 GKLYLVFEFLDRD-LKKYMDSLPKKPQGLPPRLIKSFMRQLLRGLAFLHSHGI  141 (323)
T ss_pred             ceEEEEEEeeccc-HHHHHHhccccccCCCHHHHHHHHHHHHHHHHHHHhCCe
Confidence             899999999988 888876533    57788999999999999999998764

>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase

Probab=99.85  E-value=5.6e-20  Score=130.51  Aligned_cols=122  Identities=17%  Similarity=0.235  Sum_probs=108.0

Q ss_pred             cccccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCC-chhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeEEE
Q psy8006           4 IKNIISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRS-TDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMIL   82 (126)
Q Consensus         4 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~-~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~~l   82 (126)
                      +.+|...+.||+|+||.||+|.+..++..||+|++...... ......+.+|+.++..++| |+|+++++.+......|+
T Consensus         3 ~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiKvi~~~~~~~~~~~~~~~~E~~~l~~l~h-p~Iv~~~~~~~~~~~~~l   81 (669)
T cd05610           3 IEEFVIVKPISRGAFGKVYLGRKKNNSKLYAVKVVKKADMINKNMVHQVQAERDALALSKS-PFIVHLYYSLQSANNVYL   81 (669)
T ss_pred             cCCEEEEEEEecCCCeEEEEEEECCCCcEEEEEEEehhhccCHHHHHHHHHHHHHHHhcCC-CCcCeEEEEEEECCEEEE
Confidence            56788889999999999999999999999999999865432 2334468889999999998 999999999999999999


Q ss_pred             EEeccCcccHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          83 LLELLTSAVDSKIRESFGSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        83 v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      ||||+.+++|.+++.....+++..++.++.|++.||.|||..++
T Consensus        82 VmEy~~g~~L~~li~~~~~l~~~~~~~i~~qil~aL~yLH~~gI  125 (669)
T cd05610          82 VMEYLIGGDVKSLLHIYGYFDEEMAVKYISEVALALDYLHRHGI  125 (669)
T ss_pred             EEeCCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCE
Confidence            99999999999999877789999999999999999999998764

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481

>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1

Probab=99.85  E-value=3.2e-20  Score=121.93  Aligned_cols=115  Identities=17%  Similarity=0.201  Sum_probs=96.4

Q ss_pred             eeccCccceeEEEEEEccCCcEEEEEEeecCCCCc-hhHHHHHHHHH-HHHHhcCCCCceeeeeeeEeCCeEEEEEeccC
Q psy8006          11 IINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRST-DLKAEILHEVA-VLEACRCNSRIVQLHQVFESSHDMILLLELLT   88 (126)
Q Consensus        11 ~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~-~~~~~~~~e~~-~l~~~~~~~~iv~l~~~~~~~~~~~lv~e~~~   88 (126)
                      +.||+|+||.||++.+..++..+|+|++....... .....+..|.. ++..++| |||+++++.+...+..|++|||++
T Consensus         1 ~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h-~~Iv~~~~~~~~~~~~~lv~e~~~   79 (325)
T cd05602           1 KVIGKGSFGKVLLARHKAEEKFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKH-PFLVGLHFSFQTADKLYFVLDYIN   79 (325)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHHhhhHHHHHHHHHHHHHHhCCC-CCCCceeEEEEcCCeEEEEEeCCC
Confidence            46899999999999999999999999998653221 11223444544 4566777 999999999999999999999999


Q ss_pred             cccHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          89 SAVDSKIRESFGSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        89 ~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      +++|.+++.....+++..+..++.|++.|++|||+.++
T Consensus        80 ~~~L~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~gi  117 (325)
T cd05602          80 GGELFYHLQRERCFLEPRARFYAAEIASALGYLHSLNI  117 (325)
T ss_pred             CCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence            99999998877789999999999999999999999874

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt

>KOG0033|consensus

Probab=99.85  E-value=3.1e-23  Score=128.55  Aligned_cols=119  Identities=20%  Similarity=0.289  Sum_probs=108.3

Q ss_pred             cccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeEEEEEe
Q psy8006           6 NIISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLLE   85 (126)
Q Consensus         6 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~~lv~e   85 (126)
                      +|...++||+|+|+.|++|.+..+|+.+|+|+++.+.......+.+.+|+.+.+.++| |||+++.+.+...++.|+|+|
T Consensus        12 ~y~l~e~igkG~FSvVrRc~~~~tg~~fa~kiin~~k~~~~~~e~l~rEarIC~~LqH-P~IvrL~~ti~~~~~~ylvFe   90 (355)
T KOG0033|consen   12 NYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQH-PNIVRLHDSIQEESFHYLVFD   90 (355)
T ss_pred             hhhHHHHHccCchHHHHHHHhccchHHHHHHHhhhhhhccccHHHHHHHHHHHHhcCC-CcEeehhhhhcccceeEEEEe
Confidence            4555678999999999999999999999999999888777778889999999999999 999999999999999999999


Q ss_pred             ccCcccH-HHHHHhcCCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          86 LLTSAVD-SKIRESFGSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        86 ~~~~~~L-~~~~~~~~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      +++|++| .+++++ ..++|..+..+++||++|+.|-|.-+|
T Consensus        91 ~m~G~dl~~eIV~R-~~ySEa~aSH~~rQiLeal~yCH~n~I  131 (355)
T KOG0033|consen   91 LVTGGELFEDIVAR-EFYSEADASHCIQQILEALAYCHSNGI  131 (355)
T ss_pred             cccchHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHhcCc
Confidence            9999999 566665 679999999999999999999997654

>KOG0694|consensus

Probab=99.85  E-value=7.9e-21  Score=130.62  Aligned_cols=123  Identities=14%  Similarity=0.158  Sum_probs=106.2

Q ss_pred             ccccccceeeccCccceeEEEEEEccCCcEEEEEEeecCCC-CchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeEE
Q psy8006           3 NIKNIISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRR-STDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMI   81 (126)
Q Consensus         3 ~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~-~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~~   81 (126)
                      +..+|...++||+|.||+|+++..+.++..+|||.+.+... ..+.....+.|-.++.-...||.++.++..|.+..++|
T Consensus       366 ~l~~F~~l~vLGkGsFGkV~lae~k~~~e~yAIK~LKK~~Il~~d~Ve~~~~EkrI~~la~~HPFL~~L~~~fQT~~~l~  445 (694)
T KOG0694|consen  366 TLDDFRLLAVLGRGSFGKVLLAELKGTNEYYAIKVLKKGDILQRDEVESLMCEKRIFELANRHPFLVNLFSCFQTKEHLF  445 (694)
T ss_pred             cccceEEEEEeccCcCceEEEEEEcCCCcEEEEEEeeccceeccccHHHHHHHHHHHHHhccCCeEeecccccccCCeEE
Confidence            46778889999999999999999999999999999998765 33444557888888887765599999999999999999


Q ss_pred             EEEeccCcccHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          82 LLLELLTSAVDSKIRESFGSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        82 lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      .||||+.||++.. +++.+.|++..++.++..++.||.|||+-+|
T Consensus       446 fvmey~~Ggdm~~-~~~~~~F~e~rarfyaAev~l~L~fLH~~~I  489 (694)
T KOG0694|consen  446 FVMEYVAGGDLMH-HIHTDVFSEPRARFYAAEVVLGLQFLHENGI  489 (694)
T ss_pred             EEEEecCCCcEEE-EEecccccHHHHHHHHHHHHHHHHHHHhcCc
Confidence            9999999998433 3444789999999999999999999999775

>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains

Probab=99.85  E-value=9.6e-20  Score=115.63  Aligned_cols=119  Identities=14%  Similarity=0.121  Sum_probs=105.3

Q ss_pred             ccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeEEEEEec
Q psy8006           7 IISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLLEL   86 (126)
Q Consensus         7 ~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~~lv~e~   86 (126)
                      |...+.+|+|++|.||++.+..++..+++|.+............+.+|+.+++.++| ||++++++.+...+..++++||
T Consensus         2 ~~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~h-~~i~~~~~~~~~~~~~~lv~e~   80 (256)
T cd08529           2 FEILNKIGKGSFGVVFKVVRKADKRVYAMKQIDLSKMNRREREEAIDEARVLAKLDS-SYIIRYYESFLDKGKLNIVMEY   80 (256)
T ss_pred             ceEeEEecCCCCeEEEEEEEcCCCcEEEEEEeehhhCCHHHHHHHHHHHHHHHhcCC-CCeehheeeeccCCEEEEEEEe
Confidence            556788999999999999999999999999998765555555678999999999998 9999999999999999999999


Q ss_pred             cCcccHHHHHHhc--CCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          87 LTSAVDSKIRESF--GSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        87 ~~~~~L~~~~~~~--~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      +++++|.+++...  ..+++..+..++.|++.|+.|||+.++
T Consensus        81 ~~~~~L~~~l~~~~~~~~~~~~~~~i~~~l~~al~~lH~~~i  122 (256)
T cd08529          81 AENGDLHKLLKMQRGRPLPEDQVWRFFIQILLGLAHLHSKKI  122 (256)
T ss_pred             CCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCc
Confidence            9999999888653  578999999999999999999998764

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc

>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases

Probab=99.85  E-value=5e-20  Score=121.22  Aligned_cols=114  Identities=20%  Similarity=0.230  Sum_probs=95.7

Q ss_pred             ccCccceeEEEEEEccCCcEEEEEEeecCCCCc-hhHHHHHHHHHHHHHhc--CCCCceeeeeeeEeCCeEEEEEeccCc
Q psy8006          13 NDMGKYATVRRCRDRKNGTQYAAKFLRKKRRST-DLKAEILHEVAVLEACR--CNSRIVQLHQVFESSHDMILLLELLTS   89 (126)
Q Consensus        13 lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~-~~~~~~~~e~~~l~~~~--~~~~iv~l~~~~~~~~~~~lv~e~~~~   89 (126)
                      ||+|+||.||++.+..++..+|+|.+....... ........|..++....  +||+++.+++.+..+...|+||||+++
T Consensus         1 lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~p~i~~~~~~~~~~~~~~lv~e~~~~   80 (330)
T cd05586           1 IGKGTFGQVYQVRKKDTRRIYAMKVLSKKEIVAKKEVAHTIGERNILVRTLLDESPFIVGLKFSFQTDSDLYLVTDYMSG   80 (330)
T ss_pred             CCCCCceEEEEEEECCCCCEEEEEEEeHHHHhhhhHHHHHHHHHHHHHHhccCCCCcCcceEEEEecCCeEEEEEcCCCC
Confidence            699999999999999999999999997643221 22223556666666653  349999999999999999999999999


Q ss_pred             ccHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          90 AVDSKIRESFGSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        90 ~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      ++|.+++.....+++..+..++.|++.|++|||+.++
T Consensus        81 g~L~~~l~~~~~~~~~~~~~~~~qil~al~~LH~~~i  117 (330)
T cd05586          81 GELFWHLQKEGRFSEDRAKFYIAELVLALEHLHKYDI  117 (330)
T ss_pred             ChHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence            9999888877889999999999999999999998764

Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of

>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase

Probab=99.85  E-value=1.1e-19  Score=118.65  Aligned_cols=122  Identities=19%  Similarity=0.219  Sum_probs=103.4

Q ss_pred             cccccccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeEE
Q psy8006           2 NNIKNIISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMI   81 (126)
Q Consensus         2 ~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~~   81 (126)
                      ..+.+|...+.||+|+||.||++.+..++..+|+|.+...... .....+.+|+.++..++| ||++++++.+..++..+
T Consensus         3 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~E~~~l~~l~h-~~iv~~~~~~~~~~~~~   80 (309)
T cd07872           3 GKMETYIKLEKLGEGTYATVFKGRSKLTENLVALKEIRLEHEE-GAPCTAIREVSLLKDLKH-ANIVTLHDIVHTDKSLT   80 (309)
T ss_pred             CCCCceEEEEEecccCCEEEEEEEecCCCCeEEEEEeeccccC-CcchhHHHHHHHHHhCCC-CCcceEEEEEeeCCeEE
Confidence            3567888899999999999999999999999999999765432 223357789999999998 99999999999999999


Q ss_pred             EEEeccCcccHHHHHHh-cCCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          82 LLLELLTSAVDSKIRES-FGSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        82 lv~e~~~~~~L~~~~~~-~~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      ++|||++++ +.+++.. ...+++..+..++.|++.|++|||+.++
T Consensus        81 lv~e~~~~~-l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~i  125 (309)
T cd07872          81 LVFEYLDKD-LKQYMDDCGNIMSMHNVKIFLYQILRGLAYCHRRKV  125 (309)
T ss_pred             EEEeCCCCC-HHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence            999999875 7666654 3468999999999999999999998764

Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play

>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6

Probab=99.85  E-value=1.3e-19  Score=115.81  Aligned_cols=121  Identities=13%  Similarity=0.116  Sum_probs=103.9

Q ss_pred             ccccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCC-chhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeEEEE
Q psy8006           5 KNIISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRS-TDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILL   83 (126)
Q Consensus         5 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~-~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~~lv   83 (126)
                      .+|...+.||+|+||.||++.+..++..+|+|.+...... ......+.+|+.+++.++| ||++++++.+...+..+++
T Consensus         2 ~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h-~~i~~~~~~~~~~~~~~~v   80 (267)
T cd08228           2 ANFQIEKKIGRGQFSEVYRATCLLDRKPVALKKVQIFEMMDAKARQDCVKEIDLLKQLNH-PNVIKYLDSFIEDNELNIV   80 (267)
T ss_pred             cceeeeeeeccCCCeeEEEEEEeCCCCEEEEEEeeccccCCHHHHHHHHHHHHHHHhCCC-cceeeeeeeEEECCeEEEE
Confidence            5677889999999999999999999999999988764432 2334458899999999998 9999999999999999999


Q ss_pred             EeccCcccHHHHHHh----cCCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          84 LELLTSAVDSKIRES----FGSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        84 ~e~~~~~~L~~~~~~----~~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      +||+++++|.+++..    ...+++..+..++.|++.|++|||+.++
T Consensus        81 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i  127 (267)
T cd08228          81 LELADAGDLSQMIKYFKKQKRLIPERTVWKYFVQLCSAVEHMHSRRV  127 (267)
T ss_pred             EEecCCCcHHHHHHHhhhccCCCCHHHHHHHHHHHHHHHHHHhhCCe
Confidence            999999999877752    3458999999999999999999998763

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase

>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6

Probab=99.85  E-value=1.1e-19  Score=117.53  Aligned_cols=119  Identities=20%  Similarity=0.212  Sum_probs=101.7

Q ss_pred             ccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCchh-HHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeEEEEEe
Q psy8006           7 IISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDL-KAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLLE   85 (126)
Q Consensus         7 ~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~-~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~~lv~e   85 (126)
                      |...+.||+|+||.||.+.+..+++.+|+|.+......... ...+.+|+.++..++| ++++.+.+.+...+..+++||
T Consensus         2 f~~~~~ig~G~~g~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~-~~i~~~~~~~~~~~~~~lv~e   80 (285)
T cd05630           2 FRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGESMALNEKQILEKVNS-RFVVSLAYAYETKDALCLVLT   80 (285)
T ss_pred             ceeeEEeecCCCeEEEEEEEcCCCceEEEEEEehhhccchHHHHHHHHHHHHHHhCCC-CCeeeeeEEEecCCEEEEEEE
Confidence            45567899999999999999999999999999865443222 2347789999999998 999999999998999999999


Q ss_pred             ccCcccHHHHHHhc--CCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          86 LLTSAVDSKIRESF--GSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        86 ~~~~~~L~~~~~~~--~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      |+++++|.+++...  ..+++..+..++.|++.|+.|||+.++
T Consensus        81 ~~~g~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i  123 (285)
T cd05630          81 LMNGGDLKFHIYHMGEAGFEEGRAVFYAAEICCGLEDLHQERI  123 (285)
T ss_pred             ecCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCE
Confidence            99999998877543  358999999999999999999998763

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as

>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes

Probab=99.85  E-value=7.5e-20  Score=116.07  Aligned_cols=114  Identities=20%  Similarity=0.189  Sum_probs=99.1

Q ss_pred             eeccCccceeEEEEEEccCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeEEEEEeccCcc
Q psy8006          11 IINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLLELLTSA   90 (126)
Q Consensus        11 ~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~~lv~e~~~~~   90 (126)
                      +.||+|+||.||++.+..++..+|+|.+.... .......+.+|+++++.++| ||++++++.+......++||||++++
T Consensus         1 ~~lg~g~~g~vy~~~~~~~~~~~a~k~~~~~~-~~~~~~~~~~e~~~l~~l~h-~~i~~~~~~~~~~~~~~lv~e~~~~~   78 (252)
T cd05084           1 ERIGRGNFGEVFSGRLRADNTPVAVKSCRETL-PPDLKAKFLQEARILKQYSH-PNIVRLIGVCTQKQPIYIVMELVQGG   78 (252)
T ss_pred             CccCcccCccEEEEEEecCCceEEEEecCccC-CHHHHHHHHHHHHHHHhCCC-CCcceEEEEEcCCCCeEEEEeeccCC
Confidence            36899999999999999899999999886543 23334468999999999998 99999999999889999999999999


Q ss_pred             cHHHHHHhc-CCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          91 VDSKIRESF-GSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        91 ~L~~~~~~~-~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      +|.+++... ..+++..+..++.|++.|++|||+.++
T Consensus        79 ~L~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i  115 (252)
T cd05084          79 DFLTFLRTEGPRLKVKELIQMVENAAAGMEYLESKHC  115 (252)
T ss_pred             cHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCc
Confidence            999888654 468999999999999999999998764

Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular

>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5

Probab=99.85  E-value=1.2e-19  Score=117.28  Aligned_cols=119  Identities=20%  Similarity=0.225  Sum_probs=101.7

Q ss_pred             ccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCch-hHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeEEEEEe
Q psy8006           7 IISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTD-LKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLLE   85 (126)
Q Consensus         7 ~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~-~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~~lv~e   85 (126)
                      |...+.||+|+||.||.+.+..++..+|+|.+........ ....+.+|+.++..++| ++++.+.+.+...+..+++||
T Consensus         2 ~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~~-~~i~~~~~~~~~~~~~~lv~e   80 (285)
T cd05632           2 FRQYRVLGKGGFGEVCACQVRATGKMYACKRLEKKRIKKRKGESMALNEKQILEKVNS-QFVVNLAYAYETKDALCLVLT   80 (285)
T ss_pred             ceEEEEEecCCCeEEEEEEECCCCcEEEEEEeehhhhhhhhHHHHHHHHHHHHHHcCC-cCceeEEEEEecCCEEEEEEE
Confidence            4556789999999999999999999999999977544322 22347889999999998 999999999999999999999


Q ss_pred             ccCcccHHHHHHhc--CCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          86 LLTSAVDSKIRESF--GSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        86 ~~~~~~L~~~~~~~--~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      |+++++|..++...  ..+++..+..++.|++.|+.|||+.++
T Consensus        81 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i  123 (285)
T cd05632          81 IMNGGDLKFHIYNMGNPGFEEERALFYAAEILCGLEDLHRENT  123 (285)
T ss_pred             eccCccHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCe
Confidence            99999998777542  369999999999999999999998874

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with

>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7

Probab=99.85  E-value=6.8e-20  Score=118.82  Aligned_cols=118  Identities=18%  Similarity=0.249  Sum_probs=102.6

Q ss_pred             ccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCC---chhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeEEEE
Q psy8006           7 IISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRS---TDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILL   83 (126)
Q Consensus         7 ~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~---~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~~lv   83 (126)
                      |...+.||+|++|.||+|.+..++..+++|.+......   ......+..|+.++..++| +|++++++.+...+..++|
T Consensus         2 y~~~~~lg~g~~~~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h-~~i~~~~~~~~~~~~~~lv   80 (298)
T cd07841           2 YEKGKKLGEGTYAVVYKARDKETGRIVAIKKIKLGERKEAKDGINFTALREIKLLQELKH-PNIIGLLDVFGHKSNINLV   80 (298)
T ss_pred             ceeeeeeeeccccEEEEEEECCCCcEEEEEEEeccccccccchhhHHHHHHHHHHhhcCC-CCChhhhheeecCCEEEEE
Confidence            55567899999999999999989999999999876543   2233457789999999998 9999999999998999999


Q ss_pred             EeccCcccHHHHHHhcC-CCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          84 LELLTSAVDSKIRESFG-SKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        84 ~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      |||+ +++|.+++.... .+++..+..++.|+++|+.|||+.++
T Consensus        81 ~e~~-~~~L~~~i~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i  123 (298)
T cd07841          81 FEFM-ETDLEKVIKDKSIVLTPADIKSYMLMTLRGLEYLHSNWI  123 (298)
T ss_pred             Eccc-CCCHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCe
Confidence            9999 778999987655 79999999999999999999998764

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is

>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase

Probab=99.85  E-value=1.2e-19  Score=118.19  Aligned_cols=120  Identities=13%  Similarity=0.229  Sum_probs=105.4

Q ss_pred             cccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCc-hhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeEEEEE
Q psy8006           6 NIISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRST-DLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLL   84 (126)
Q Consensus         6 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~-~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~~lv~   84 (126)
                      +|...+.+|+|+||.||++.+..++..+++|.+....... .....+.+|+.+++.++| ||++++++.+..++..+++|
T Consensus         2 ~y~~~~~l~~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~e~~~l~~~~~-~~i~~~~~~~~~~~~~~lv~   80 (305)
T cd05609           2 DFETIKLISNGAYGAVYLVRHKETRQRFAMKKINKQNLILRNQIQQVFVERDILTFAEN-PFVVSMFCSFETKRHLCMVM   80 (305)
T ss_pred             CceEeeEeecCCCeeEEEEEECCCCcEEEEEEeehhhhhhHHHHHHHHHHHHHHHhCCC-CCeeeeEEEEecCCEEEEEE
Confidence            5667789999999999999999999999999988654321 223457889999999998 99999999999999999999


Q ss_pred             eccCcccHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          85 ELLTSAVDSKIRESFGSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        85 e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      ||+++++|.+++...+.+++..+..++.|++.|++|||+.++
T Consensus        81 e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i  122 (305)
T cd05609          81 EYVEGGDCATLLKNIGALPVDMARMYFAETVLALEYLHNYGI  122 (305)
T ss_pred             ecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCc
Confidence            999999999999877789999999999999999999998764

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a

>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8

Probab=99.85  E-value=1.7e-19  Score=114.47  Aligned_cols=120  Identities=11%  Similarity=0.150  Sum_probs=105.9

Q ss_pred             cccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeEEEEEe
Q psy8006           6 NIISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLLE   85 (126)
Q Consensus         6 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~~lv~e   85 (126)
                      +|...+.||+|++|.||.+.+..++..+++|.+............+.+|+.+++.++| |+++++++.+...+..++++|
T Consensus         1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~~~~-~~i~~~~~~~~~~~~~~lv~e   79 (256)
T cd08220           1 KYEKIRVVGRGAFGIVHLCRRKADQKLVIIKQIPVEQMTKDERLAAQNECQVLKLLSH-PNIIEYYENFLEDKALMIVME   79 (256)
T ss_pred             CceEEEEecccCceEEEEEEEcCCCcEEEEEEEeccccccHHHHHHHHHHHHHhhCCC-CchhheeeeEecCCEEEEEEe
Confidence            4667789999999999999999999999999998766555555678999999999998 999999999988899999999


Q ss_pred             ccCcccHHHHHHhc--CCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          86 LLTSAVDSKIRESF--GSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        86 ~~~~~~L~~~~~~~--~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      ++++++|.+++...  ..+++..+..++.|++.+++|||+.++
T Consensus        80 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i  122 (256)
T cd08220          80 YAPGGTLAEYIQKRCNSLLDEDTILHFFVQILLALHHVHTKLI  122 (256)
T ss_pred             cCCCCCHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCe
Confidence            99999999888753  358999999999999999999998763

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with

>PTZ00266 NIMA-related protein kinase; Provisional

Probab=99.85  E-value=1.1e-19  Score=131.59  Aligned_cols=120  Identities=13%  Similarity=0.209  Sum_probs=104.6

Q ss_pred             cccccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEe--CCeEE
Q psy8006           4 IKNIISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFES--SHDMI   81 (126)
Q Consensus         4 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~--~~~~~   81 (126)
                      +..|...+.||+|+||.||++.+..++..+|+|.+............+.+|+.++..++| |||+++++.+..  ...+|
T Consensus        12 l~~YeIl~kLG~GgFGtVYLAkdk~tg~~vAlKvIk~~~l~e~~~~~~~~EI~IL~~L~H-PNIVrl~d~f~de~~~~ly   90 (1021)
T PTZ00266         12 LNEYEVIKKIGNGRFGEVFLVKHKRTQEFFCWKAISYRGLKEREKSQLVIEVNVMRELKH-KNIVRYIDRFLNKANQKLY   90 (1021)
T ss_pred             cCCEEEEEEEecCCCeEEEEEEECCCCeEEEEEEEeccccCHHHHHHHHHHHHHHHHcCC-CCcCeEEEEEEecCCCEEE
Confidence            456788899999999999999999999999999998766555555568999999999999 999999998854  45789


Q ss_pred             EEEeccCcccHHHHHHh----cCCCCHHHHHHHHHHHHHHHHhhhcc
Q psy8006          82 LLLELLTSAVDSKIRES----FGSKSESGVQNCLEPSISVFSSLSKF  124 (126)
Q Consensus        82 lv~e~~~~~~L~~~~~~----~~~~~~~~~~~~~~qi~~~l~~l~~~  124 (126)
                      +||||+++++|.+++..    ...+++..++.++.||+.||.|||..
T Consensus        91 IVMEY~~gGSL~~lL~k~~~~~g~L~E~~Il~Ia~QIL~ALaYLHs~  137 (1021)
T PTZ00266         91 ILMEFCDAGDLSRNIQKCYKMFGKIEEHAIVDITRQLLHALAYCHNL  137 (1021)
T ss_pred             EEEeCCCCCcHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhc
Confidence            99999999999888764    24799999999999999999999974

>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7

Probab=99.84  E-value=1.7e-19  Score=115.11  Aligned_cols=121  Identities=13%  Similarity=0.131  Sum_probs=105.0

Q ss_pred             ccccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCc-hhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeEEEE
Q psy8006           5 KNIISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRST-DLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILL   83 (126)
Q Consensus         5 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~-~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~~lv   83 (126)
                      ++|...+.||+|++|.||++.+..++..+++|.+....... .....+.+|+.++++++| ++++++++.+...+..+++
T Consensus         2 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~ei~~l~~~~~-~~i~~~~~~~~~~~~~~lv   80 (267)
T cd08224           2 GNFKIEKKIGKGQFSVVYKAICLLDGRVVALKKVQIFEMMDAKARQDCLKEIDLLKQLDH-PNVIKYLASFIENNELNIV   80 (267)
T ss_pred             CceeeeeeeccCCceEEEEEEEcCCCCEEEEEEeecccccchhhHHHHHHHHHHHHhCCC-CCeeeeeeeeecCCeEEEE
Confidence            46778899999999999999999899999999987543322 334568899999999998 9999999999999999999


Q ss_pred             EeccCcccHHHHHHh----cCCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          84 LELLTSAVDSKIRES----FGSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        84 ~e~~~~~~L~~~~~~----~~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      |||+++++|..++..    +..+++..+..++.|++.++.|||+.++
T Consensus        81 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i  127 (267)
T cd08224          81 LELADAGDLSRMIKHFKKQKRLIPERTIWKYFVQLCSALEHMHSKRI  127 (267)
T ss_pred             EecCCCCCHHHHHHHhcccCCCcCHHHHHHHHHHHHHHHHHHHhCCE
Confidence            999999999888753    3458999999999999999999998764

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a

>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3

Probab=99.84  E-value=4.5e-20  Score=118.94  Aligned_cols=120  Identities=18%  Similarity=0.261  Sum_probs=104.2

Q ss_pred             cccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeEEEEEe
Q psy8006           6 NIISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLLE   85 (126)
Q Consensus         6 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~~lv~e   85 (126)
                      +|...+.||+|++|.||+|.+..++..+|+|.+............+.+|+.++..++| ||++++++.+..+...++++|
T Consensus         2 ~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h-~~i~~~~~~~~~~~~~~lv~e   80 (286)
T cd07846           2 KYENLGLVGEGSYGMVMKCKHKETGQIVAIKKFLESEDDKMVKKIAMREIRMLKQLRH-ENLVNLIEVFRRKKRLYLVFE   80 (286)
T ss_pred             ceeEeeeeccCCCeEEEEEEECCCCCEEEEEeHhhccCcchhhHHHHHHHHHHHhcCC-cchhhHHHhcccCCeEEEEEe
Confidence            4666789999999999999998889999999887654433334458889999999998 999999999999999999999


Q ss_pred             ccCcccHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          86 LLTSAVDSKIRESFGSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        86 ~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      |++++++..+......+++..+..++.|++.+++|||+.++
T Consensus        81 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i  121 (286)
T cd07846          81 FVDHTVLDDLEKYPNGLDESRVRKYLFQILRGIEFCHSHNI  121 (286)
T ss_pred             cCCccHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCc
Confidence            99999888777665678999999999999999999998763

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI

>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7

Probab=99.84  E-value=1e-19  Score=117.14  Aligned_cols=113  Identities=21%  Similarity=0.198  Sum_probs=95.9

Q ss_pred             ccCccceeEEEEEEccCCcEEEEEEeecCCCCch-hHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeEEEEEeccCccc
Q psy8006          13 NDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTD-LKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLLELLTSAV   91 (126)
Q Consensus        13 lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~-~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~~lv~e~~~~~~   91 (126)
                      ||+|+||.||++.+..++..+|+|.+........ .......|++++.+++| ||++++.+.+..+.+.+++|||+++++
T Consensus         1 lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~il~~l~h-p~i~~~~~~~~~~~~~~lv~e~~~g~~   79 (277)
T cd05607           1 LGKGGFGEVCAVQVKNTGKMYACKKLDKKRLKKKSGEKMALLEKEILEKVNS-PFIVNLAYAFESKTHLCLVMSLMNGGD   79 (277)
T ss_pred             CCCCCceEEEEEEEccCCcEEEEEEEcHHHhhcchhhHHHHHHHHHHHhcCC-CcEEEEEEEEecCCeEEEEEecCCCCC
Confidence            6899999999999999999999999976443222 12245679999999998 999999999999999999999999999


Q ss_pred             HHHHHHhc--CCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          92 DSKIRESF--GSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        92 L~~~~~~~--~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      |.+++...  ..+++..+..++.|++.|++|||+.++
T Consensus        80 L~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i  116 (277)
T cd05607          80 LKYHIYNVGERGLEMERVIHYSAQITCGILHLHSMDI  116 (277)
T ss_pred             HHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHCCE
Confidence            98777543  358889999999999999999998764

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr

>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N

Probab=99.84  E-value=7.5e-20  Score=120.16  Aligned_cols=117  Identities=17%  Similarity=0.156  Sum_probs=97.3

Q ss_pred             cceeeccCccceeEEEEEEccCCcEEEEEEeecCCCC-chhHHHHHHHHHHHH---HhcCCCCceeeeeeeEeCCeEEEE
Q psy8006           8 ISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRS-TDLKAEILHEVAVLE---ACRCNSRIVQLHQVFESSHDMILL   83 (126)
Q Consensus         8 ~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~-~~~~~~~~~e~~~l~---~~~~~~~iv~l~~~~~~~~~~~lv   83 (126)
                      ...+.||+|+||.||++.+..++..+|+|.+...... ......+.+|..++.   .++| ||++++++.+...+..|+|
T Consensus         2 ~i~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~l~~e~~~~~~~~~l~h-p~i~~~~~~~~~~~~~~lv   80 (324)
T cd05589           2 RCLAVLGRGHFGKVLLAEYKKTGELYAIKALKKGDIIARDEVESLMCEKRIFETANSERH-PFLVNLFACFQTEDHVCFV   80 (324)
T ss_pred             eEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccccCC-CChhceeeEEEcCCEEEEE
Confidence            3467899999999999999999999999999865322 222335667766554   5567 9999999999999999999


Q ss_pred             EeccCcccHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          84 LELLTSAVDSKIRESFGSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        84 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      |||+++++|...+.. ..+++..+..++.|++.|++|||+.++
T Consensus        81 ~E~~~~~~L~~~~~~-~~l~~~~~~~~~~qi~~al~~lH~~~i  122 (324)
T cd05589          81 MEYAAGGDLMMHIHT-DVFSEPRAVFYAACVVLGLQYLHENKI  122 (324)
T ss_pred             EcCCCCCcHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHHhCCe
Confidence            999999999877764 569999999999999999999998764

Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved

>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity

Probab=99.84  E-value=1e-19  Score=116.20  Aligned_cols=115  Identities=19%  Similarity=0.173  Sum_probs=96.0

Q ss_pred             ceeeccCccceeEEEEEEc----cCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeEEEEE
Q psy8006           9 SSIINDMGKYATVRRCRDR----KNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLL   84 (126)
Q Consensus         9 ~~~~lg~g~~~~v~~~~~~----~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~~lv~   84 (126)
                      ..+.||.|+||.|++|...    ..+..+++|.+.... .......+.+|+..+.+++| |||+++++.+...+..++|+
T Consensus         3 ~~~~ig~G~fg~v~~~~~~~~~~~~~~~V~vk~~~~~~-~~~~~~~~~~e~~~l~~l~h-~ni~~~~g~~~~~~~~~lv~   80 (259)
T PF07714_consen    3 LIKQIGEGSFGKVYRAEWKQKDNDKNQPVAVKILKPSS-SEEEEEEFLNEIQILRKLRH-PNIVKLYGFCIENEPLFLVM   80 (259)
T ss_dssp             EEEEEEEESSEEEEEEEEESTTTSSEEEEEEEEESTTS-SHHHHHHHHHHHHHHHTHSB-TTBE-EEEEEESSSSEEEEE
T ss_pred             EeeEEccCCCcEEEEEEEEcccCCCCEEEEEEEecccc-ccccceeeeecccccccccc-cccccccccccccccccccc
Confidence            3578999999999999887    345689999995532 23335579999999999988 99999999999888899999


Q ss_pred             eccCcccHHHHHHhc--CCCCHHHHHHHHHHHHHHHHhhhccC
Q psy8006          85 ELLTSAVDSKIRESF--GSKSESGVQNCLEPSISVFSSLSKFE  125 (126)
Q Consensus        85 e~~~~~~L~~~~~~~--~~~~~~~~~~~~~qi~~~l~~l~~~~  125 (126)
                      ||+++|+|.+++...  ..++......++.|++.|+.|||+.+
T Consensus        81 e~~~~g~L~~~L~~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~  123 (259)
T PF07714_consen   81 EYCPGGSLDDYLKSKNKEPLSEQQRLSIAIQIAEALSYLHSNN  123 (259)
T ss_dssp             E--TTEBHHHHHHHTCTTTSBHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             ccccccccccccccccccccccccccccccccccccccccccc
Confidence            999999999999875  67999999999999999999999875

Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....

>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases

Probab=99.84  E-value=1.2e-19  Score=116.32  Aligned_cols=120  Identities=16%  Similarity=0.150  Sum_probs=102.7

Q ss_pred             cccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCc--------hhHHHHHHHHHHHHHhcCCCCceeeeeeeEeC
Q psy8006           6 NIISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRST--------DLKAEILHEVAVLEACRCNSRIVQLHQVFESS   77 (126)
Q Consensus         6 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~--------~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~   77 (126)
                      +|...+.||+|++|.||+|.+..++..+|+|.+.......        ...+.+.+|+.++..++| ||++++++.+..+
T Consensus         2 ~~~~~~~lg~g~~~~vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h-~~i~~~~~~~~~~   80 (272)
T cd06629           2 KWVKGELIGKGTYGRVYLALNVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDLDH-LNIVQYLGFETTE   80 (272)
T ss_pred             ceeecceecccCceEEEEEeecCCCceeeeeeeechhhhhcccchHHHHHHHHHHHHHHHHHhcCC-CCcceEEEEeccC
Confidence            3567789999999999999998889999999886432211        112347789999999998 9999999999999


Q ss_pred             CeEEEEEeccCcccHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          78 HDMILLLELLTSAVDSKIRESFGSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        78 ~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      +..++|+||+++++|.+++.....+++..+..++.|++.|+.|||+.++
T Consensus        81 ~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i  129 (272)
T cd06629          81 EYLSIFLEYVPGGSIGSCLRTYGRFEEQLVRFFTEQVLEGLAYLHSKGI  129 (272)
T ss_pred             CceEEEEecCCCCcHHHHHhhccCCCHHHHHHHHHHHHHHHHHHhhCCe
Confidence            9999999999999999998877789999999999999999999998763

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte

>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4

Probab=99.84  E-value=2.6e-19  Score=114.06  Aligned_cols=119  Identities=15%  Similarity=0.108  Sum_probs=106.1

Q ss_pred             ccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeEEEEEec
Q psy8006           7 IISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLLEL   86 (126)
Q Consensus         7 ~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~~lv~e~   86 (126)
                      |...+.||+|++|.||.+.+..++..+++|.+............+.+|+.+++.++| ++++++++.....+..++++||
T Consensus         2 y~~~~~lg~G~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~l~~-~~i~~~~~~~~~~~~~~lv~e~   80 (264)
T cd06626           2 WQRGNKIGGGTFGKVYTAVNLDTGELMAVKEIRIQDNDPKTIKEIADEMKVLELLKH-PNLVKYYGVEVHREKVYIFMEY   80 (264)
T ss_pred             ceeeeEeecCCCcEEEEEEECCCCcEEEEEEEECcccchHHHHHHHHHHHHHHhCCC-CChhheeeeEecCCEEEEEEec
Confidence            556789999999999999998889999999998765543445679999999999998 9999999999888999999999


Q ss_pred             cCcccHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          87 LTSAVDSKIRESFGSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        87 ~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      +++++|.+++.....+++..+..++.|++.+++|||+.++
T Consensus        81 ~~~~~L~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~i  120 (264)
T cd06626          81 CSGGTLEELLEHGRILDEHVIRVYTLQLLEGLAYLHSHGI  120 (264)
T ss_pred             CCCCcHHHHHhhcCCCChHHHHHHHHHHHHHHHHHHHCCc
Confidence            9999999999876678999999999999999999998764

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4

>KOG0574|consensus

Probab=99.84  E-value=1.9e-21  Score=124.04  Aligned_cols=110  Identities=18%  Similarity=0.275  Sum_probs=100.1

Q ss_pred             eeeccCccceeEEEEEEccCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeEEEEEeccCc
Q psy8006          10 SIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLLELLTS   89 (126)
Q Consensus        10 ~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~~lv~e~~~~   89 (126)
                      -..||+|+||.|+++.++.+|..+|+|.+...    ...++..+|+.+|+++++ |++|++|+.+.....+|||||||..
T Consensus        38 ~~KLGEGSYGSV~KAIH~EsG~v~AIK~VPV~----sDLQEIIKEISIMQQC~S-~yVVKYYGSYFK~sDLWIVMEYCGA  112 (502)
T KOG0574|consen   38 VGKLGEGSYGSVHKAIHRESGHVLAIKKVPVD----TDLQEIIKEISIMQQCKS-KYVVKYYGSYFKHSDLWIVMEYCGA  112 (502)
T ss_pred             HHHhcCCcchHHHHHHHhccCcEEEEEecCcc----chHHHHHHHHHHHHHcCC-chhhhhhhhhccCCceEeehhhcCC
Confidence            45799999999999999999999999988653    346689999999999999 9999999999999999999999999


Q ss_pred             ccHHHHHHh-cCCCCHHHHHHHHHHHHHHHHhhhcc
Q psy8006          90 AVDSKIRES-FGSKSESGVQNCLEPSISVFSSLSKF  124 (126)
Q Consensus        90 ~~L~~~~~~-~~~~~~~~~~~~~~qi~~~l~~l~~~  124 (126)
                      |+..++++. +.++++.++..+++..+.+++|||.+
T Consensus       113 GSiSDI~R~R~K~L~E~EIs~iL~~TLKGL~YLH~~  148 (502)
T KOG0574|consen  113 GSISDIMRARRKPLSEQEISAVLRDTLKGLQYLHDL  148 (502)
T ss_pred             CcHHHHHHHhcCCccHHHHHHHHHHHHhHHHHHHHH
Confidence            999998874 56899999999999999999999976

>PHA03212 serine/threonine kinase US3; Provisional

Probab=99.84  E-value=1.4e-19  Score=121.64  Aligned_cols=112  Identities=13%  Similarity=0.040  Sum_probs=98.9

Q ss_pred             ccccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeEEEEE
Q psy8006           5 KNIISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLL   84 (126)
Q Consensus         5 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~~lv~   84 (126)
                      ..|...+.||+|+||.||.|.+..+++.+|+|....        ..+.+|+.++..++| |||+++++.+......++++
T Consensus        92 ~~y~~~~~lg~G~~g~V~~~~d~~~~~~vaiK~~~~--------~~~~~E~~il~~l~H-pnIv~~~~~~~~~~~~~lv~  162 (391)
T PHA03212         92 AGFSILETFTPGAEGFAFACIDNKTCEHVVIKAGQR--------GGTATEAHILRAINH-PSIIQLKGTFTYNKFTCLIL  162 (391)
T ss_pred             CCcEEEEEEcCCCCeEEEEEEECCCCCEEEEechhh--------hhhHHHHHHHHhCCC-CCCCCEeEEEEECCeeEEEE
Confidence            357778899999999999999999999999996532        246789999999999 99999999999999999999


Q ss_pred             eccCcccHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          85 ELLTSAVDSKIRESFGSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        85 e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      |++.+ +|..++..+..+++..++.++.|++.||+|||+.++
T Consensus       163 e~~~~-~L~~~l~~~~~l~~~~~~~i~~qi~~aL~ylH~~~I  203 (391)
T PHA03212        163 PRYKT-DLYCYLAAKRNIAICDILAIERSVLRAIQYLHENRI  203 (391)
T ss_pred             ecCCC-CHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCc
Confidence            99875 488888777789999999999999999999999764

>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1

Probab=99.84  E-value=2.6e-19  Score=113.69  Aligned_cols=119  Identities=17%  Similarity=0.209  Sum_probs=103.6

Q ss_pred             ccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCC---chhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeEEEE
Q psy8006           7 IISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRS---TDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILL   83 (126)
Q Consensus         7 ~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~---~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~~lv   83 (126)
                      |...+.||+|++|.||+|....++..+++|.+......   ......+.+|+.++..++| |+++++++.+..+...+++
T Consensus         2 ~~~~~~ig~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h-~~i~~~~~~~~~~~~~~lv   80 (258)
T cd06632           2 WRKGELLGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQH-PNIVQYLGTEREEDNLYIF   80 (258)
T ss_pred             ccccceeeecCCceEEEEEEcCCCcEEEEEEEEEccccccchHHHHHHHHHHHHHHhcCC-CCchheeeeEecCCeEEEE
Confidence            45678899999999999999888999999998764321   2234468899999999998 9999999999988999999


Q ss_pred             EeccCcccHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          84 LELLTSAVDSKIRESFGSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        84 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      +||+++++|.+++.+...+++..+..++.|++.+++|||..++
T Consensus        81 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i  123 (258)
T cd06632          81 LELVPGGSLAKLLKKYGSFPEPVIRLYTRQILLGLEYLHDRNT  123 (258)
T ss_pred             EEecCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCc
Confidence            9999999999999877778999999999999999999998763

Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops

>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1

Probab=99.84  E-value=3.1e-19  Score=113.43  Aligned_cols=119  Identities=16%  Similarity=0.192  Sum_probs=103.7

Q ss_pred             ccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeEEEEEec
Q psy8006           7 IISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLLEL   86 (126)
Q Consensus         7 ~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~~lv~e~   86 (126)
                      |...+.||+|+||.+|.+.+..++..+++|.+............+.+|+.++++++| ||++++.+.+...+..++++||
T Consensus         2 y~~~~~lg~g~~g~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~-~~i~~~~~~~~~~~~~~lv~e~   80 (256)
T cd08218           2 YVKVKKIGEGSFGKAILVKSKEDGKQYVIKEINISKMSPKEREESRKEVAVLSNMKH-PNIVQYQESFEENGNLYIVMDY   80 (256)
T ss_pred             ceEEEEeccCCceEEEEEEEcCCCCEEEEEEEEhHhCChHHHHHHHHHHHHHHhCCC-CCeeeeEeeecCCCeEEEEEec
Confidence            556788999999999999999999999999998655444444568899999999999 9999999999999999999999


Q ss_pred             cCcccHHHHHHhc--CCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          87 LTSAVDSKIRESF--GSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        87 ~~~~~L~~~~~~~--~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      +.+++|.+++...  ..+++..+..++.|++.++.|||+.++
T Consensus        81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i  122 (256)
T cd08218          81 CEGGDLYKKINAQRGVLFPEDQILDWFVQICLALKHVHDRKI  122 (256)
T ss_pred             CCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCE
Confidence            9999998887653  358899999999999999999998763

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti

>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases

Probab=99.84  E-value=3.1e-19  Score=114.07  Aligned_cols=119  Identities=17%  Similarity=0.213  Sum_probs=103.2

Q ss_pred             ccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCch-------hHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCe
Q psy8006           7 IISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTD-------LKAEILHEVAVLEACRCNSRIVQLHQVFESSHD   79 (126)
Q Consensus         7 ~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~-------~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~   79 (126)
                      +..+..||+|++|.||.|.+..++..+|+|.+........       ....+.+|+.++.+++| ||++++++.+...+.
T Consensus         2 ~~~~~~ig~g~~~~v~~a~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h-~~i~~~~~~~~~~~~   80 (267)
T cd06628           2 WIKGALIGSGSFGSVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKELQH-ENIVQYLGSSLDADH   80 (267)
T ss_pred             ccccceeecCCCeEEEEEEecCCCcEEEEEEecCCCcccchhHHHHHHHHHHHHHHHHHHhcCC-CCeeeEEEEEEeCCc
Confidence            4556789999999999999988899999998876543221       12357889999999998 999999999999999


Q ss_pred             EEEEEeccCcccHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          80 MILLLELLTSAVDSKIRESFGSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        80 ~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      .++++||+++++|.+++.....+++..+..++.|++.|++|||+.++
T Consensus        81 ~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~~l~~~l~~lH~~~i  127 (267)
T cd06628          81 LNIFLEYVPGGSVAALLNNYGAFEETLVRNFVRQILKGLNYLHNRGI  127 (267)
T ss_pred             cEEEEEecCCCCHHHHHHhccCccHHHHHHHHHHHHHHHHHHHhcCc
Confidence            99999999999999999877789999999999999999999998763

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate

>PLN00034 mitogen-activated protein kinase kinase; Provisional

Probab=99.84  E-value=6.4e-20  Score=121.76  Aligned_cols=117  Identities=17%  Similarity=0.248  Sum_probs=99.3

Q ss_pred             cccccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeEEEE
Q psy8006           4 IKNIISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILL   83 (126)
Q Consensus         4 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~~lv   83 (126)
                      ..+|...+.||+|+||.||++.+..++..+|+|.+..... ......+.+|+.+++.++| +||+++++.+...+..+++
T Consensus        73 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~E~~~l~~l~h-~~iv~~~~~~~~~~~~~lv  150 (353)
T PLN00034         73 LSELERVNRIGSGAGGTVYKVIHRPTGRLYALKVIYGNHE-DTVRRQICREIEILRDVNH-PNVVKCHDMFDHNGEIQVL  150 (353)
T ss_pred             HHHHhhhhhccCCCCeEEEEEEECCCCCEEEEEEEecCCc-HHHHHHHHHHHHHHHhCCC-CCcceeeeEeccCCeEEEE
Confidence            4556677899999999999999999999999999965432 2334468899999999998 9999999999999999999


Q ss_pred             EeccCcccHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          84 LELLTSAVDSKIRESFGSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        84 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      |||+++++|..    ....++..+..++.|++.|++|||+.++
T Consensus       151 ~e~~~~~~L~~----~~~~~~~~~~~i~~qi~~aL~~LH~~~i  189 (353)
T PLN00034        151 LEFMDGGSLEG----THIADEQFLADVARQILSGIAYLHRRHI  189 (353)
T ss_pred             EecCCCCcccc----cccCCHHHHHHHHHHHHHHHHHHHHCCE
Confidence            99999998753    2345778888999999999999998763

>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit

Probab=99.84  E-value=7.5e-20  Score=122.36  Aligned_cols=92  Identities=13%  Similarity=0.113  Sum_probs=75.2

Q ss_pred             cccceeeccCccceeEEEEEE-----ccCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeE
Q psy8006           6 NIISSIINDMGKYATVRRCRD-----RKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDM   80 (126)
Q Consensus         6 ~~~~~~~lg~g~~~~v~~~~~-----~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~   80 (126)
                      +|...+.||+|+||.||+|..     ..++..+|+|.+..... ......+.+|+.++..+.+||||+++++.+...+..
T Consensus        36 ~~~~~~~LG~G~fG~V~~~~~~~~~~~~~~~~vavK~l~~~~~-~~~~~~~~~Ei~il~~l~~HpnIv~l~~~~~~~~~~  114 (375)
T cd05104          36 RLSFGKTLGAGAFGKVVEATAYGLFKSDAAMTVAVKMLKPSAH-LTEREALMSELKVLSYLGNHINIVNLLGACTVGGPT  114 (375)
T ss_pred             HeehhheecCCccceEEEEEEeccccCccceeEEEEeccCCcC-cHHHHHHHHHHHHHHHhcCCcceeeeeeeeccCCcc
Confidence            566788999999999999964     34566899999875432 223446889999999994349999999999999999


Q ss_pred             EEEEeccCcccHHHHHHh
Q psy8006          81 ILLLELLTSAVDSKIRES   98 (126)
Q Consensus        81 ~lv~e~~~~~~L~~~~~~   98 (126)
                      ++||||+++|+|.+++..
T Consensus       115 ~lv~E~~~~g~L~~~l~~  132 (375)
T cd05104         115 LVITEYCCYGDLLNFLRR  132 (375)
T ss_pred             eeeehhccCCcHHHHHHh
Confidence            999999999999888754

Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce

>KOG4250|consensus

Probab=99.84  E-value=8.9e-21  Score=130.79  Aligned_cols=118  Identities=20%  Similarity=0.205  Sum_probs=101.6

Q ss_pred             ccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCC------eE
Q psy8006           7 IISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSH------DM   80 (126)
Q Consensus         7 ~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~------~~   80 (126)
                      ....+.||+|+||.||++.++.+|+.+|||.++... .......+.+|++++++++| ||||++++.-++..      ..
T Consensus        15 W~~~e~LG~Ga~g~V~rgrnketG~~vAvK~~~~~~-~~r~~e~~~~EieilkKLnh-~NIVk~f~iee~~~~~~~~~~~   92 (732)
T KOG4250|consen   15 WEMDERLGKGAFGNVYRGRNKETGRLVAVKTFNKES-SLRPRERWCREIEILKKLNH-PNIVKLFDIEETKFLGLVTRLP   92 (732)
T ss_pred             eeehhhhcCCccceeeeecccccccchhHHhhhhhc-ccchHHHHHHHHHHHHHcCc-hhhhhhcccCCccccCcccccc
Confidence            345778999999999999999999999999998754 23345679999999999997 99999998876443      46


Q ss_pred             EEEEeccCcccHHHHHHhc---CCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          81 ILLLELLTSAVDSKIRESF---GSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        81 ~lv~e~~~~~~L~~~~~~~---~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      .++||||.+|+|...+.+.   ..+++.+.+.++..+..|+.|||+-+|
T Consensus        93 vlvmEyC~gGsL~~~L~~PEN~~GLpE~e~l~lL~d~~~al~~LrEn~I  141 (732)
T KOG4250|consen   93 VLVMEYCSGGSLRKVLNSPENAYGLPESEFLDLLSDLVSALRHLRENGI  141 (732)
T ss_pred             eEEEeecCCCcHHHHhcCcccccCCCHHHHHHHHHHHHHHHHHHHHcCc
Confidence            8999999999999999753   369999999999999999999997654

>PRK13184 pknD serine/threonine-protein kinase; Reviewed

Probab=99.84  E-value=2.6e-19  Score=128.95  Aligned_cols=122  Identities=11%  Similarity=0.064  Sum_probs=103.6

Q ss_pred             cccccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCc-hhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeEEE
Q psy8006           4 IKNIISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRST-DLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMIL   82 (126)
Q Consensus         4 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~-~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~~l   82 (126)
                      +.+|...+.||+|+||.||+|.+..++..+|+|.++...... ....++.+|+.++..++| ||++++++.+..++..++
T Consensus         1 igrYeIi~~LGkGgfG~VYlA~d~~tg~~VAIK~I~~~l~~~e~~~~rflrEi~ILs~L~H-PNIVkl~~v~~d~~~lyL   79 (932)
T PRK13184          1 MQRYDIIRLIGKGGMGEVYLAYDPVCSRRVALKKIREDLSENPLLKKRFLREAKIAADLIH-PGIVPVYSICSDGDPVYY   79 (932)
T ss_pred             CCCeEEEEEEecCCCEEEEEEEECCCCcEEEEEEECcccccCHHHHHHHHHHHHHHHhCCC-cCcCeEEEEEeeCCEEEE
Confidence            456788899999999999999999999999999998654322 234468999999999999 999999999999999999


Q ss_pred             EEeccCcccHHHHHHhc-----------CCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          83 LLELLTSAVDSKIRESF-----------GSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        83 v~e~~~~~~L~~~~~~~-----------~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      +|||+++++|.+++...           ...+...+..++.|++.|++|||+.++
T Consensus        80 VMEY~eGGSL~~lL~s~~~~~~l~e~~~~~lsv~~iL~I~~QIa~AL~yLHs~GI  134 (932)
T PRK13184         80 TMPYIEGYTLKSLLKSVWQKESLSKELAEKTSVGAFLSIFHKICATIEYVHSKGV  134 (932)
T ss_pred             EEEcCCCCCHHHHHHHhhhccccchhhhcccCHHHHHHHHHHHHHHHHHHHHCCc
Confidence            99999999998887531           134566778899999999999999764

>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5

Probab=99.84  E-value=7.9e-20  Score=117.75  Aligned_cols=118  Identities=19%  Similarity=0.204  Sum_probs=100.3

Q ss_pred             ccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeEEEEEec
Q psy8006           7 IISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLLEL   86 (126)
Q Consensus         7 ~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~~lv~e~   86 (126)
                      |...+.||+|++|.||++.+..+|..+++|.+............+.+|+.++..++| ||++++++.+......++++||
T Consensus         2 y~~~~~l~~g~~~~vy~~~~~~~g~~~~~k~~~~~~~~~~~~~~~~~ei~~l~~l~h-~~i~~~~~~~~~~~~~~lv~e~   80 (284)
T cd07839           2 YEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKH-KNIVRLYDVLHSDKKLTLVFEY   80 (284)
T ss_pred             ceeEEEecccCCeEEEEEEECCCCcEEEEEEeecccccccCccchhHHHHHHHhcCC-CCeeeHHHHhccCCceEEEEec
Confidence            556678999999999999999999999999997654333333457789999999998 9999999999999999999999


Q ss_pred             cCcccHHHHHHh-cCCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          87 LTSAVDSKIRES-FGSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        87 ~~~~~L~~~~~~-~~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      ++++ |.+++.. ...+++..++.++.|++.|+.|||..++
T Consensus        81 ~~~~-l~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~i  120 (284)
T cd07839          81 CDQD-LKKYFDSCNGDIDPEIVKSFMFQLLKGLAFCHSHNV  120 (284)
T ss_pred             CCCC-HHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCE
Confidence            9875 6666553 5679999999999999999999998764

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also

>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like

Probab=99.84  E-value=3.7e-19  Score=114.63  Aligned_cols=118  Identities=19%  Similarity=0.187  Sum_probs=100.7

Q ss_pred             ccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeEEEEEec
Q psy8006           7 IISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLLEL   86 (126)
Q Consensus         7 ~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~~lv~e~   86 (126)
                      |...+.||+|++|.||++.+..++..+|+|.+............+.+|+.++..++| ||++++++.+..++..++||||
T Consensus         2 y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h-~~i~~~~~~~~~~~~~~~v~e~   80 (285)
T cd07861           2 YTKIEKIGEGTYGVVYKGRNKKTGQIVAMKKIRLESEEEGVPSTAIREISLLKELQH-PNIVCLQDVLMQESRLYLIFEF   80 (285)
T ss_pred             ceEeeEecccCceEEEEEEECCCCcEEEEEEeccccccCCchHHHHHHHHHHHhcCC-CCEeeeEEEEeeCCeEEEEEec
Confidence            556778999999999999999999999999987654433334568889999999998 9999999999999999999999


Q ss_pred             cCcccHHHHHHh---cCCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          87 LTSAVDSKIRES---FGSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        87 ~~~~~L~~~~~~---~~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      +++ +|.+++..   ...+++..+..++.|++.|++|||+.++
T Consensus        81 ~~~-~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i  122 (285)
T cd07861          81 LSM-DLKKYLDSLPKGQYMDAELVKSYLYQILQGILFCHSRRV  122 (285)
T ss_pred             CCC-CHHHHHhcCCCCCcCCHHHHHHHHHHHHHHHHHHHhCCe
Confidence            985 47777653   2468999999999999999999998763

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2

>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1

Probab=99.84  E-value=3e-19  Score=116.27  Aligned_cols=120  Identities=18%  Similarity=0.199  Sum_probs=98.4

Q ss_pred             ccccceeeccCccceeEEEEEEcc----------------CCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCce
Q psy8006           5 KNIISSIINDMGKYATVRRCRDRK----------------NGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIV   68 (126)
Q Consensus         5 ~~~~~~~~lg~g~~~~v~~~~~~~----------------~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv   68 (126)
                      ..|...+.||+|+||.||+|.+..                ++..+|+|.+..... ......+.+|+.++.+++| |||+
T Consensus         5 ~~~~~~~~lg~G~fg~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~E~~~l~~l~h-~niv   82 (304)
T cd05096           5 GHLLFKEKLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDAN-KNARNDFLKEVKILSRLKD-PNII   82 (304)
T ss_pred             hhCeeeeEecccCCeEEEEEEeccCcccccccccccccCCcceEEEEEEecCCCC-HHHHHHHHHHHHHHhhcCC-CCee
Confidence            356678899999999999997532                234799999876432 2334568999999999998 9999


Q ss_pred             eeeeeeEeCCeEEEEEeccCcccHHHHHHhcC-------------------CCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          69 QLHQVFESSHDMILLLELLTSAVDSKIRESFG-------------------SKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        69 ~l~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~-------------------~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      ++++.+...+..+++|||+++++|.+++....                   .++...+..++.|++.|+.|||+.++
T Consensus        83 ~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i  159 (304)
T cd05096          83 RLLGVCVDEDPLCMITEYMENGDLNQFLSSHHLDDKEENGNDAVPPAHCLPAISYSSLLHVALQIASGMKYLSSLNF  159 (304)
T ss_pred             EEEEEEecCCceEEEEecCCCCcHHHHHHhccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHCCc
Confidence            99999998889999999999999988876421                   35677889999999999999998764

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k

>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases

Probab=99.84  E-value=5.4e-19  Score=112.51  Aligned_cols=119  Identities=18%  Similarity=0.217  Sum_probs=105.6

Q ss_pred             ccccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeEEEEE
Q psy8006           5 KNIISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLL   84 (126)
Q Consensus         5 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~~lv~   84 (126)
                      ++|...+.+|+|++|.||.+.+..++..+++|.+......  ....+.+|+.++..++| ||++++++.+......+++|
T Consensus         3 ~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~--~~~~~~~e~~~l~~~~h-~~i~~~~~~~~~~~~~~l~~   79 (262)
T cd06613           3 EDYELIQRIGSGTYGDVYKARDIATGELVAIKVIKLEPGD--DFEIIQQEISMLKECRH-PNIVAYFGSYLRRDKLWIVM   79 (262)
T ss_pred             cceEEEEEecCCCceEEEEeEecCCCCEEEEEEEEcCchh--hHHHHHHHHHHHHhCCC-CChhceEEEEEeCCEEEEEE
Confidence            4677788999999999999999988999999999865432  34568899999999998 99999999999999999999


Q ss_pred             eccCcccHHHHHHhc-CCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          85 ELLTSAVDSKIRESF-GSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        85 e~~~~~~L~~~~~~~-~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      ||+++++|.+++... ..+++..+..++.|++.+++|||+.++
T Consensus        80 e~~~~~~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~i  122 (262)
T cd06613          80 EYCGGGSLQDIYQVTRGPLSELQIAYVCRETLKGLAYLHETGK  122 (262)
T ss_pred             eCCCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHhCCc
Confidence            999999999888765 689999999999999999999998763

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ

>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases

Probab=99.83  E-value=1.6e-19  Score=116.37  Aligned_cols=120  Identities=21%  Similarity=0.312  Sum_probs=104.7

Q ss_pred             cccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeEEEEEe
Q psy8006           6 NIISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLLE   85 (126)
Q Consensus         6 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~~lv~e   85 (126)
                      +|...+.||+|++|.||++.+..++..+++|.+............+.+|+.+++.++| +|++++.+.+..++..++++|
T Consensus         2 ~y~~~~~i~~g~~~~v~~~~~~~~~~~v~vK~~~~~~~~~~~~~~~~~e~~~l~~l~~-~~i~~~~~~~~~~~~~~iv~e   80 (288)
T cd07833           2 KYEVLGVVGEGAYGVVLKCRNKATGEIVAIKKFKESEDDEDVKKTALREVKVLRQLRH-ENIVNLKEAFRRKGRLYLVFE   80 (288)
T ss_pred             ceeEEEEecccCCeeEEEEEeCCCCcEEEEehhhhhcccccchhHHHHHHHHHHhcCC-CCeeehhheEEECCEEEEEEe
Confidence            5667889999999999999999999999999987655444445568999999999998 999999999999999999999


Q ss_pred             ccCcccHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          86 LLTSAVDSKIRESFGSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        86 ~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      |++++.+..+......+++..+..++.|++.+++|||+.++
T Consensus        81 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i  121 (288)
T cd07833          81 YVERTLLELLEASPGGLPPDAVRSYIWQLLQAIAYCHSHNI  121 (288)
T ss_pred             cCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence            99998777666665679999999999999999999998763

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning

>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7

Probab=99.83  E-value=1.8e-19  Score=115.09  Aligned_cols=121  Identities=15%  Similarity=0.157  Sum_probs=104.2

Q ss_pred             ccccceeeccCccceeEEEEEEccCCcEEEEEEeecCCC-CchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeEEEE
Q psy8006           5 KNIISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRR-STDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILL   83 (126)
Q Consensus         5 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~-~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~~lv   83 (126)
                      ++|...+.||+|++|.||++.+..++..+++|.+..... .......+.+|+.+++.++| ||++++++.+..++..+++
T Consensus         2 ~~y~~~~~ig~g~~g~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~~e~~~l~~~~h-~~i~~~~~~~~~~~~~~~v   80 (267)
T cd08229           2 ANFRIEKKIGRGQFSEVYRATCLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNH-PNVIKYYASFIEDNELNIV   80 (267)
T ss_pred             chhhhhhhhcccCCeEEEEEeecCCCceEEEEeeeehhhhhHHHHHHHHHHHHHHHHccC-CchhhhhheeEeCCeEEEE
Confidence            567778899999999999999988999999998876433 22334468899999999998 9999999999999999999


Q ss_pred             EeccCcccHHHHHHh----cCCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          84 LELLTSAVDSKIRES----FGSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        84 ~e~~~~~~L~~~~~~----~~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      ||++++++|.+++..    ...+++..+..++.|++.|+.|||+.++
T Consensus        81 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i  127 (267)
T cd08229          81 LELADAGDLSRMIKHFKKQKRLIPEKTVWKYFVQLCSALEHMHSRRV  127 (267)
T ss_pred             EEecCCCCHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence            999999999888763    3468999999999999999999998763

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.

>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2

Probab=99.83  E-value=4.6e-19  Score=113.26  Aligned_cols=120  Identities=18%  Similarity=0.204  Sum_probs=102.3

Q ss_pred             ccccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCc---hhHHHHHHHHHHHHHhcCCCCceeeeeeeEeC--Ce
Q psy8006           5 KNIISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRST---DLKAEILHEVAVLEACRCNSRIVQLHQVFESS--HD   79 (126)
Q Consensus         5 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~---~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~--~~   79 (126)
                      .+|...+.||+|+||.||.+.+..++..+++|.+.......   .....+.+|+.++..+.| ||++++++.+..+  ..
T Consensus         2 ~~~~~~~~l~~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h-~~i~~~~~~~~~~~~~~   80 (265)
T cd06652           2 TNWRLGKLLGQGAFGRVYLCYDADTGRELAVKQVQFDPESPETSKEVNALECEIQLLKNLLH-ERIVQYYGCLRDPMERT   80 (265)
T ss_pred             CcceEeeEEecCCceEEEEEEEcCCCcEEEEEEeecCcCCcccHHHHHHHHHHHHHHHhcCC-CCeeeEEeEeccCCCce
Confidence            46777899999999999999999999999999987543221   223458889999999998 9999999987653  46


Q ss_pred             EEEEEeccCcccHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhhccC
Q psy8006          80 MILLLELLTSAVDSKIRESFGSKSESGVQNCLEPSISVFSSLSKFE  125 (126)
Q Consensus        80 ~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~l~~~~  125 (126)
                      .++++||+++++|.+++.+...+++..+..++.|++.+++|||+.+
T Consensus        81 ~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~l~~~l~~lH~~~  126 (265)
T cd06652          81 LSIFMEHMPGGSIKDQLKSYGALTENVTRKYTRQILEGVSYLHSNM  126 (265)
T ss_pred             EEEEEEecCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            8899999999999999887677899999999999999999999876

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re

>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase

Probab=99.83  E-value=3e-19  Score=114.85  Aligned_cols=113  Identities=24%  Similarity=0.267  Sum_probs=97.7

Q ss_pred             ccCccceeEEEEEEccCCcEEEEEEeecCCCCch-hHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeEEEEEeccCccc
Q psy8006          13 NDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTD-LKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLLELLTSAV   91 (126)
Q Consensus        13 lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~-~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~~lv~e~~~~~~   91 (126)
                      ||+|+||.||.+.+..++..+++|.+........ ....+.+|+.+++.++| |+++++.+.+...+..|+++||+++++
T Consensus         1 lg~g~~g~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~~-~~i~~~~~~~~~~~~~~lv~e~~~~~~   79 (277)
T cd05577           1 LGKGGFGEVCACQVKATGKMYACKKLDKKRLKKRKGEQMALNEKKILEKVSS-RFIVSLAYAFETKDDLCLVMTLMNGGD   79 (277)
T ss_pred             CCCCCceeEEEEEEcCCCcEEEEEEEehhhhhhhhhhHHHHHHHHHHHhCCC-CCEeeeeeEEecCCeEEEEEecCCCCc
Confidence            6899999999999999999999999986543222 23346789999999998 999999999999899999999999999


Q ss_pred             HHHHHHhcC--CCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          92 DSKIRESFG--SKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        92 L~~~~~~~~--~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      |.+++....  .+++..+..++.|++.++.|||+.++
T Consensus        80 L~~~l~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i  116 (277)
T cd05577          80 LKYHIYNVGEPGFPEARAIFYAAQIICGLEHLHQRRI  116 (277)
T ss_pred             HHHHHHHcCcCCCCHHHHHHHHHHHHHHHHHHHhCCc
Confidence            988886644  69999999999999999999998764

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of

>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3

Probab=99.83  E-value=5.6e-19  Score=112.97  Aligned_cols=121  Identities=18%  Similarity=0.232  Sum_probs=103.3

Q ss_pred             ccccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCc---hhHHHHHHHHHHHHHhcCCCCceeeeeeeEe--CCe
Q psy8006           5 KNIISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRST---DLKAEILHEVAVLEACRCNSRIVQLHQVFES--SHD   79 (126)
Q Consensus         5 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~---~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~--~~~   79 (126)
                      .||...+.+|+|+||.||++.+..++..+++|.+.......   .....+.+|+.+++.++| ||++++++.+..  ...
T Consensus         2 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h-~~i~~~~~~~~~~~~~~   80 (266)
T cd06651           2 INWRRGKLLGQGAFGRVYLCYDVDTGRELAAKQVQFDPESPETSKEVSALECEIQLLKNLQH-ERIVQYYGCLRDRAEKT   80 (266)
T ss_pred             CCccccceecCCCCEEEEEEEEcCCCcEEEEEEeecCcCCchhHHHHHHHHHHHHHHHHcCC-CCeeeEEEEEEcCCCCE
Confidence            36788899999999999999999999999999987654322   223358889999999998 999999998865  357


Q ss_pred             EEEEEeccCcccHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          80 MILLLELLTSAVDSKIRESFGSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        80 ~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      .++++|++++++|.+++.....+++.....++.|++.+++|||+.++
T Consensus        81 ~~l~~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~LH~~~i  127 (266)
T cd06651          81 LTIFMEYMPGGSVKDQLKAYGALTESVTRKYTRQILEGMSYLHSNMI  127 (266)
T ss_pred             EEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCe
Confidence            89999999999999988876778999999999999999999998763

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development

>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase

Probab=99.83  E-value=4.3e-19  Score=115.40  Aligned_cols=121  Identities=19%  Similarity=0.217  Sum_probs=103.2

Q ss_pred             ccccccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeEEE
Q psy8006           3 NIKNIISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMIL   82 (126)
Q Consensus         3 ~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~~l   82 (126)
                      .++.|...+.||+|+||.||++.+..++..+|+|.+...... .....+.+|+.++..++| |||+++++.+..++..++
T Consensus         4 ~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~E~~~l~~l~h-~nI~~~~~~~~~~~~~~l   81 (301)
T cd07873           4 KLETYIKLDKLGEGTYATVYKGRSKLTDNLVALKEIRLEHEE-GAPCTAIREVSLLKDLKH-ANIVTLHDIIHTEKSLTL   81 (301)
T ss_pred             cccceEEeeEeccCcCEEEEEEEEcCCCcEEEEEEEeccccc-CchhHHHHHHHHHHhcCC-CCcceEEEEEecCCeEEE
Confidence            466788889999999999999999999999999998755322 223357789999999999 999999999999999999


Q ss_pred             EEeccCcccHHHHHHh-cCCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          83 LLELLTSAVDSKIRES-FGSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        83 v~e~~~~~~L~~~~~~-~~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      ++||+++ +|.+++.. ...+++..+..++.|++.|++|||+.++
T Consensus        82 v~e~~~~-~l~~~l~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~i  125 (301)
T cd07873          82 VFEYLDK-DLKQYLDDCGNSINMHNVKLFLFQLLRGLNYCHRRKV  125 (301)
T ss_pred             EEecccc-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCe
Confidence            9999986 57776654 4568999999999999999999998764

Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl

>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1

Probab=99.83  E-value=2.5e-19  Score=116.00  Aligned_cols=123  Identities=20%  Similarity=0.233  Sum_probs=104.7

Q ss_pred             cccccccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeC--Ce
Q psy8006           2 NNIKNIISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESS--HD   79 (126)
Q Consensus         2 ~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~--~~   79 (126)
                      .++++|...+.||+|++|.||+|.+..++..+++|.++...........+.+|+.++.+++| ||++++.+.+..+  ..
T Consensus         2 ~~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h-~ni~~~~~~~~~~~~~~   80 (293)
T cd07843           2 RSVDEYEKLNRIEEGTYGVVYRARDKKTGEIVALKKLKMEKEKEGFPITSLREINILLKLQH-PNIVTVKEVVVGSNLDK   80 (293)
T ss_pred             cchhhhhhhhhhcCCCCeEEEEEEECCCCcEEEEEEEeeccccccchhhHHHHHHHHHhcCC-CCEEEEEEEEEecCCCc
Confidence            45678888999999999999999999899999999998654433333356789999999998 9999999998877  78


Q ss_pred             EEEEEeccCcccHHHHHHhc-CCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          80 MILLLELLTSAVDSKIRESF-GSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        80 ~~lv~e~~~~~~L~~~~~~~-~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      .|+++||+++ +|.+++... ..+++..+..++.|++.|++|||+.++
T Consensus        81 ~~lv~e~~~~-~L~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~i  127 (293)
T cd07843          81 IYMVMEYVEH-DLKSLMETMKQPFLQSEVKCLMLQLLSGVAHLHDNWI  127 (293)
T ss_pred             EEEEehhcCc-CHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence            9999999986 587777653 458999999999999999999998763

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the

>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins

Probab=99.83  E-value=5.4e-19  Score=112.57  Aligned_cols=119  Identities=15%  Similarity=0.267  Sum_probs=106.3

Q ss_pred             cccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeEEEEEe
Q psy8006           6 NIISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLLE   85 (126)
Q Consensus         6 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~~lv~e   85 (126)
                      +|...+.||+|++|.||++.+..++..+++|.+...... .....+.+|+..+..++| +|++++++.+..++..++++|
T Consensus         2 ~~~~~~~i~~g~~~~v~~~~~~~~~~~~~vk~~~~~~~~-~~~~~~~~e~~~l~~l~~-~~i~~~~~~~~~~~~~~lv~e   79 (264)
T cd06623           2 DLERVKVLGQGSSGVVYKVRHKPTGKIYALKKIHVDGDE-EFRKQLLRELKTLRSCES-PYVVKCYGAFYKEGEISIVLE   79 (264)
T ss_pred             cceeeeeeeecCCeEEEEEEEcCCCcEEEEEEeccCcch-HHHHHHHHHHHHHHhcCC-CCeeeEEEEEccCCeEEEEEE
Confidence            566778999999999999999999999999999876432 334568999999999998 999999999999999999999


Q ss_pred             ccCcccHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhhc-cCC
Q psy8006          86 LLTSAVDSKIRESFGSKSESGVQNCLEPSISVFSSLSK-FET  126 (126)
Q Consensus        86 ~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~l~~-~~~  126 (126)
                      |+++++|.+++.....+++..+..++.|++.+++|||. .++
T Consensus        80 ~~~~~~L~~~l~~~~~l~~~~~~~~~~~l~~~l~~lh~~~~~  121 (264)
T cd06623          80 YMDGGSLADLLKKVGKIPEPVLAYIARQILKGLDYLHTKRHI  121 (264)
T ss_pred             ecCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHhccCCC
Confidence            99999999999877889999999999999999999998 653

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of

>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases

Probab=99.83  E-value=3.5e-19  Score=114.91  Aligned_cols=118  Identities=15%  Similarity=0.246  Sum_probs=104.4

Q ss_pred             cccccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeEEEE
Q psy8006           4 IKNIISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILL   83 (126)
Q Consensus         4 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~~lv   83 (126)
                      .++|...+.||+|++|.||++.+..++..+|+|.+..... ......+.+|++++..++| ||++++++.+...+..++|
T Consensus         4 ~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~-~~~~~~~~~E~~~l~~l~h-~~i~~~~~~~~~~~~~~lv   81 (284)
T cd06620           4 NEDLETISDLGAGNGGSVSKVKHIPTGTVMAKKVVHIGAK-SSVRKQILRELQIMHECRS-PYIVSFYGAFLNENNICMC   81 (284)
T ss_pred             HHHHHHHHHcCCCCCeEEEEEEEcCCCcEEEEEEEEecCc-chHHHHHHHHHHHHHHcCC-CCcceEeeeEecCCEEEEE
Confidence            4567777899999999999999999999999998875432 3334568899999999998 9999999999999999999


Q ss_pred             EeccCcccHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhhc
Q psy8006          84 LELLTSAVDSKIRESFGSKSESGVQNCLEPSISVFSSLSK  123 (126)
Q Consensus        84 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~l~~  123 (126)
                      +||+++++|.+++...+.+++..+..++.|++.++.|||.
T Consensus        82 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~  121 (284)
T cd06620          82 MEFMDCGSLDRIYKKGGPIPVEILGKIAVAVVEGLTYLYN  121 (284)
T ss_pred             EecCCCCCHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHH
Confidence            9999999999888877789999999999999999999995

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase

Probab=99.83  E-value=4.2e-19  Score=113.20  Aligned_cols=113  Identities=19%  Similarity=0.253  Sum_probs=100.3

Q ss_pred             ccCccceeEEEEEEccCCcEEEEEEeecCCCCc-hhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeEEEEEeccCccc
Q psy8006          13 NDMGKYATVRRCRDRKNGTQYAAKFLRKKRRST-DLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLLELLTSAV   91 (126)
Q Consensus        13 lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~-~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~~lv~e~~~~~~   91 (126)
                      ||.|++|.||.+.+..++..+++|.+....... .....+.+|+.+++.++| ||++++.+.+..+...++++||+++++
T Consensus         1 lg~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h-~~i~~~~~~~~~~~~~~lv~e~~~~~~   79 (262)
T cd05572           1 LGVGGFGRVELVKVKSKNRTFALKCVKKRHIVETGQQEHIFSEKEILEECNH-PFIVKLYRTFKDKKYIYMLMEYCLGGE   79 (262)
T ss_pred             CCCCCceEEEEEEECCCCcEEEEEEEehhcchhhhHHHHHHHHHHHHHhCCC-CCEeeeeeeEEcCCccEEEEecCCCCc
Confidence            689999999999999889999999998765432 334468999999999998 999999999999999999999999999


Q ss_pred             HHHHHHhcCCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          92 DSKIRESFGSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        92 L~~~~~~~~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      |.+++.+...+++..+..++.|++.|++|||+.++
T Consensus        80 L~~~l~~~~~l~~~~~~~~~~~i~~~l~~lH~~~~  114 (262)
T cd05572          80 LWTILRDRGLFDEYTARFYIACVVLAFEYLHNRGI  114 (262)
T ss_pred             HHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhCCc
Confidence            99999877779999999999999999999998763

Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi

>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4

Probab=99.83  E-value=6.3e-19  Score=112.58  Aligned_cols=118  Identities=17%  Similarity=0.166  Sum_probs=101.4

Q ss_pred             ccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCc----hhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeEEE
Q psy8006           7 IISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRST----DLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMIL   82 (126)
Q Consensus         7 ~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~----~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~~l   82 (126)
                      |...+.||+|+||.||++.. .++..+|+|.+.......    .....+.+|+.+++.++| +|++++.+.+...+..++
T Consensus         2 ~~~~~~ig~g~~~~v~~~~~-~~~~~~avk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~-~~i~~~~~~~~~~~~~~l   79 (265)
T cd06631           2 WTKGEVLGKGAYGTVYCGLT-NQGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLKH-VNIVQYLGTCLDDNTISI   79 (265)
T ss_pred             ccccceEeccCCeEEEEEEE-cCCCeEEEEEeecCccchhhHHHHHHHHHHHHHHHHhcCC-CCEeeEeeEeecCCeEEE
Confidence            45678899999999999986 468889999987653221    122358899999999998 999999999999999999


Q ss_pred             EEeccCcccHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          83 LLELLTSAVDSKIRESFGSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        83 v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      ++||+++++|.+++.+...+++..+..++.|++.+++|||+.++
T Consensus        80 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i  123 (265)
T cd06631          80 FMEFVPGGSISSILNRFGPLPEPVFCKYTKQILDGVAYLHNNCV  123 (265)
T ss_pred             EEecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCc
Confidence            99999999999999877789999999999999999999998764

Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.

>KOG0599|consensus

Probab=99.83  E-value=1.1e-20  Score=118.91  Aligned_cols=122  Identities=18%  Similarity=0.258  Sum_probs=108.6

Q ss_pred             ccccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCC------chhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCC
Q psy8006           5 KNIISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRS------TDLKAEILHEVAVLEACRCNSRIVQLHQVFESSH   78 (126)
Q Consensus         5 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~------~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~   78 (126)
                      .+|.+.+++|.|..+.|.+|.++.++..+|+|++......      .+......+|+.+++++..||+|+++.+.++++.
T Consensus        17 ~~y~pkeilgrgvss~vrRci~k~t~~e~a~kii~~~at~~~~e~~~~~~EaT~~Ev~ILRqv~GHP~II~l~D~yes~s   96 (411)
T KOG0599|consen   17 AKYEPKEILGRGVSSVVRRCIHKETGKEFAVKIIDVTATTESGETPYEMREATRQEISILRQVMGHPYIIDLQDVYESDA   96 (411)
T ss_pred             hhcChHHHhcccchhhhhhhhhcccccceeEEEEEecccccCCccHHHHHHHHHHHHHHHHHhcCCCcEEEeeeeccCcc
Confidence            4577889999999999999999999999999999864321      1234457899999999987899999999999999


Q ss_pred             eEEEEEeccCcccHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          79 DMILLLELLTSAVDSKIRESFGSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        79 ~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      +.++|+|+|+.|.|.+++.+.-.++|..++.+++|++++++|||...|
T Consensus        97 F~FlVFdl~prGELFDyLts~VtlSEK~tR~iMrqlfegVeylHa~~I  144 (411)
T KOG0599|consen   97 FVFLVFDLMPRGELFDYLTSKVTLSEKETRRIMRQLFEGVEYLHARNI  144 (411)
T ss_pred             hhhhhhhhcccchHHHHhhhheeecHHHHHHHHHHHHHHHHHHHHhhh
Confidence            999999999999999999998899999999999999999999998653

>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase

Probab=99.83  E-value=5.4e-19  Score=113.85  Aligned_cols=118  Identities=19%  Similarity=0.238  Sum_probs=103.5

Q ss_pred             ccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeEEEEEec
Q psy8006           7 IISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLLEL   86 (126)
Q Consensus         7 ~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~~lv~e~   86 (126)
                      |...+.||+|++|.||+|.+..++..+++|.+............+.+|+.+++.++| ||++++++.+..+...++|+||
T Consensus         2 y~~~~~l~~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~e~~~l~~~~~-~~i~~~~~~~~~~~~~~~v~e~   80 (286)
T cd07832           2 YKILGRIGEGAHGIVFKAKDRETGETVALKKVALRRLEGGIPNQALREIKALQACQH-PYVVKLLDVFPHGSGFVLVMEY   80 (286)
T ss_pred             ceEEeecccCCCcEEEEEEECCCCceEEEEEEEcccccchhhHHHHHHHHHHHhCCC-CCCcceeeEEecCCeeEEEecc
Confidence            556778999999999999999899999999998765444445568899999999998 9999999999999999999999


Q ss_pred             cCcccHHHHHHh-cCCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          87 LTSAVDSKIRES-FGSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        87 ~~~~~L~~~~~~-~~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      + +++|.+++.. ...+++..+..++.|++.+++|||+.++
T Consensus        81 ~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i  120 (286)
T cd07832          81 M-PSDLSEVLRDEERPLPEAQVKSYMRMLLKGVAYMHANGI  120 (286)
T ss_pred             c-CCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence            9 8889888764 4568999999999999999999998763

Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea

>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases

Probab=99.83  E-value=9e-19  Score=110.92  Aligned_cols=119  Identities=18%  Similarity=0.209  Sum_probs=106.7

Q ss_pred             ccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeEEEEEec
Q psy8006           7 IISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLLEL   86 (126)
Q Consensus         7 ~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~~lv~e~   86 (126)
                      |...+.||+|++|.+|.+.+..++..+++|.+............+.+|++++.+++| |+++++.+.+..++..++++|+
T Consensus         2 y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~-~~i~~~~~~~~~~~~~~~v~e~   80 (254)
T cd06627           2 YQLGDLIGRGAFGVVYKGLNLETGDFVAIKQISLEKIKEEALKSIMQEIDLLKNLKH-PNIVKYIGSIETSDSLYIILEY   80 (254)
T ss_pred             ceeeeEEcccCCeEEEEEEEcCCCcEEEEEEecccccCHHHHHHHHHHHHHHHhCCC-CCccEEEEEEEeCCEEEEEEec
Confidence            556789999999999999999889999999998776544445578999999999998 9999999999989999999999


Q ss_pred             cCcccHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          87 LTSAVDSKIRESFGSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        87 ~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      +++++|.+++.....+++..+..++.|++.++.+||+.++
T Consensus        81 ~~~~~L~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~i  120 (254)
T cd06627          81 AENGSLRQIIKKFGPFPESLVAVYVYQVLQGLAYLHEQGV  120 (254)
T ss_pred             CCCCcHHHHHHhccCCCHHHHHHHHHHHHHHHHHHhhCCc
Confidence            9999999999877789999999999999999999998764

Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast

>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha

Probab=99.83  E-value=2.4e-19  Score=120.81  Aligned_cols=92  Identities=15%  Similarity=0.134  Sum_probs=74.5

Q ss_pred             cccceeeccCccceeEEEEEEccC-----CcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeE
Q psy8006           6 NIISSIINDMGKYATVRRCRDRKN-----GTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDM   80 (126)
Q Consensus         6 ~~~~~~~lg~g~~~~v~~~~~~~~-----~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~   80 (126)
                      .|...+.||+|+||.||+|.+...     +..+|+|.+..... ....+.+.+|+.++..+..||||+++++++...+..
T Consensus        38 ~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~-~~~~~~~~~Ei~~l~~l~~HpnIv~l~~~~~~~~~~  116 (400)
T cd05105          38 GLVLGRILGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTAR-SSEKQALMSELKIMTHLGPHLNIVNLLGACTKSGPI  116 (400)
T ss_pred             ceehhheecCCCCceEEEEEEcccCCCCCceEEEEEecCCCCC-hHHHHHHHHHHHHHHhcCCCCCeeeEEEEEccCCce
Confidence            456678999999999999986433     34699999975432 233456899999999997339999999999988999


Q ss_pred             EEEEeccCcccHHHHHHh
Q psy8006          81 ILLLELLTSAVDSKIRES   98 (126)
Q Consensus        81 ~lv~e~~~~~~L~~~~~~   98 (126)
                      |+||||+++|+|.+++..
T Consensus       117 ~lv~Ey~~~g~L~~~l~~  134 (400)
T cd05105         117 YIITEYCFYGDLVNYLHK  134 (400)
T ss_pred             EEEEEecCCCcHHHHHHH
Confidence            999999999999887753

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-

>KOG1026|consensus

Probab=99.83  E-value=2e-20  Score=131.01  Aligned_cols=117  Identities=15%  Similarity=0.146  Sum_probs=99.1

Q ss_pred             cccceeeccCccceeEEEEEEc-----cCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeE
Q psy8006           6 NIISSIINDMGKYATVRRCRDR-----KNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDM   80 (126)
Q Consensus         6 ~~~~~~~lg~g~~~~v~~~~~~-----~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~   80 (126)
                      ++...+.||+|+||+||+|+-.     .....||||.++.... ...++.|.||++++..++| ||||+++|.+..++..
T Consensus       487 ~i~~~~eLGegaFGkVf~a~~~~l~p~~~~~lVAVK~LKd~a~-~~~~~dF~REaeLla~l~H-~nIVrLlGVC~~~~P~  564 (774)
T KOG1026|consen  487 DIVFKEELGEGAFGKVFLAEAYGLLPGQDEQLVAVKALKDKAE-NQARQDFRREAELLAELQH-PNIVRLLGVCREGDPL  564 (774)
T ss_pred             heeehhhhcCchhhhhhhhhccCCCCCccceehhHhhhccccc-HHHHHHHHHHHHHHHhccC-CCeEEEEEEEccCCee
Confidence            4566778999999999999743     3345899999986542 2346679999999999999 9999999999999999


Q ss_pred             EEEEeccCcccHHHHHHhc--------------CCCCHHHHHHHHHHHHHHHHhhhcc
Q psy8006          81 ILLLELLTSAVDSKIRESF--------------GSKSESGVQNCLEPSISVFSSLSKF  124 (126)
Q Consensus        81 ~lv~e~~~~~~L~~~~~~~--------------~~~~~~~~~~~~~qi~~~l~~l~~~  124 (126)
                      ++|+|||..|+|.+|+...              .+++..+.+.++.||+.+++||...
T Consensus       565 ~MvFEYm~~GDL~eFLra~sP~a~~~~~g~~~~~~L~~~q~L~iA~QIAaGM~YLs~~  622 (774)
T KOG1026|consen  565 CMVFEYMDHGDLHEFLRARSPKADKLASGQDTPPPLSTSQFLHIATQIAAGMEYLSSH  622 (774)
T ss_pred             EEEEEecccccHHHHHHhhCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence            9999999999999998631              1278899999999999999999864

>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2

Probab=99.83  E-value=4.4e-19  Score=117.98  Aligned_cols=119  Identities=17%  Similarity=0.170  Sum_probs=99.2

Q ss_pred             cccccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCC-----
Q psy8006           4 IKNIISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSH-----   78 (126)
Q Consensus         4 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~-----   78 (126)
                      ...|...+.||+|+||.||++.+..++..+|+|.+............+.+|+.+++.++| ||++++++.+....     
T Consensus        20 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h-~niv~~~~~~~~~~~~~~~   98 (359)
T cd07876          20 LKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNH-KNIISLLNVFTPQKSLEEF   98 (359)
T ss_pred             hhceEEEEEeecCCCEEEEEEEEcCCCceeEEEEecccccchhHHHHHHHHHHHHHhCCC-CCEeeeeeeeccCCCcccc
Confidence            356777899999999999999999999999999997654444444568899999999998 99999999886443     


Q ss_pred             -eEEEEEeccCcccHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          79 -DMILLLELLTSAVDSKIRESFGSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        79 -~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                       ..|++|||++++ +.+.+..  .+++..+..++.|++.|+.|||+.++
T Consensus        99 ~~~~lv~e~~~~~-l~~~~~~--~~~~~~~~~~~~qi~~~L~~LH~~~i  144 (359)
T cd07876          99 QDVYLVMELMDAN-LCQVIHM--ELDHERMSYLLYQMLCGIKHLHSAGI  144 (359)
T ss_pred             ceeEEEEeCCCcC-HHHHHhc--cCCHHHHHHHHHHHHHHHHHHHhCCc
Confidence             479999999887 5555543  47889999999999999999999764

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase

Probab=99.83  E-value=4e-19  Score=115.01  Aligned_cols=120  Identities=19%  Similarity=0.195  Sum_probs=99.7

Q ss_pred             cccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCe-----E
Q psy8006           6 NIISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHD-----M   80 (126)
Q Consensus         6 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~-----~   80 (126)
                      +|...+.||+|+||.||++.+..++..+|+|.+............+.+|+.++..+++|||++++++.+...+.     .
T Consensus         2 ~y~~~~~lg~g~~g~vy~~~~~~~~~~v~lK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~~~   81 (295)
T cd07837           2 AYEKLEKIGEGTYGKVYKARDKNTGKLVALKKTRLEMDEEGIPPTALREISLLQMLSESIYIVRLLDVEHVEEKNGKPSL   81 (295)
T ss_pred             CceEeeEecccCCeEEEEEEECCCCcEEEEEeehhhccccCCchHHHHHHHHHHHccCCCCccceeeeEeecCCCCCceE
Confidence            57778899999999999999999999999999876543333344688899999999766999999998876555     8


Q ss_pred             EEEEeccCcccHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          81 ILLLELLTSAVDSKIRESF-----GSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        81 ~lv~e~~~~~~L~~~~~~~-----~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      |++|||++++ +.+++...     ..+++..+..++.|++.|++|||+.++
T Consensus        82 ~lv~e~~~~~-l~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~i  131 (295)
T cd07837          82 YLVFEYLDSD-LKKFMDSNGRGPGRPLPAKTIKSFMYQLLKGVAHCHKHGV  131 (295)
T ss_pred             EEEeeccCcC-HHHHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence            9999999974 76666432     358999999999999999999998764

Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm

>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2

Probab=99.83  E-value=5.1e-19  Score=115.25  Aligned_cols=122  Identities=17%  Similarity=0.131  Sum_probs=99.8

Q ss_pred             cccccceeeccCccceeEEEEEEccCCcE--EEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeEE
Q psy8006           4 IKNIISSIINDMGKYATVRRCRDRKNGTQ--YAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMI   81 (126)
Q Consensus         4 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~--~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~~   81 (126)
                      +++|...+.||+|+||.||+|.+..++..  +++|.+.... .......+.+|+.++.++.+|||++++++.+...+..|
T Consensus         6 ~~~~~~~~~lg~G~~g~V~~a~~~~~~~~~~~~ik~~~~~~-~~~~~~~~~~Ei~~l~~l~~h~~iv~~~~~~~~~~~~~   84 (303)
T cd05088           6 WNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYA-SKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLY   84 (303)
T ss_pred             hhhceeeeeecCCCCceEEEEEEccCCceeeEEEEEecccC-CHHHHHHHHHHHHHHHHhcCCCCcceEEEEECCCCCce
Confidence            46777889999999999999998777764  4666665322 22334468889999999943499999999999999999


Q ss_pred             EEEeccCcccHHHHHHhcC----------------CCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          82 LLLELLTSAVDSKIRESFG----------------SKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        82 lv~e~~~~~~L~~~~~~~~----------------~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      ++|||+++++|.+++....                .+++..+..++.|++.|++|||+.++
T Consensus        85 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~gi  145 (303)
T cd05088          85 LAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQF  145 (303)
T ss_pred             EEEEeCCCCcHHHHHHhcccccccccccccccccCcCCHHHHHHHHHHHHHHHHHHHhCCc
Confidence            9999999999998886432                47889999999999999999998764

Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A

>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10

Probab=99.83  E-value=4.9e-19  Score=115.48  Aligned_cols=124  Identities=20%  Similarity=0.215  Sum_probs=104.2

Q ss_pred             CcccccccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeC--C
Q psy8006           1 MNNIKNIISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESS--H   78 (126)
Q Consensus         1 ~~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~--~   78 (126)
                      ++++++|...+.||+|+||.||++.+..++..+|+|.+..............+|+.++++++| +|++++++.+...  +
T Consensus         3 ~~~~~~y~~~~~ig~g~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h-~~i~~~~~~~~~~~~~   81 (309)
T cd07845           3 CRSVTEFEKLNRIGEGTYGIVYRARDTTSGEIVALKKVRMDNERDGIPISSLREITLLLNLRH-PNIVELKEVVVGKHLD   81 (309)
T ss_pred             cccccceeEeeeeeecCCEEEEEEEECCCCcEEEEEEEEeccCCCCCcchhhHHHHHHHhCCC-CCCcceEEEEecCCCC
Confidence            467889999999999999999999999999999999998654333323346789999999999 9999999998654  4


Q ss_pred             eEEEEEeccCcccHHHHHHh-cCCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          79 DMILLLELLTSAVDSKIRES-FGSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        79 ~~~lv~e~~~~~~L~~~~~~-~~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      ..++||||++++ |.+++.. ...+++..+..++.|++.|++|||..++
T Consensus        82 ~~~lv~e~~~~~-l~~~l~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i  129 (309)
T cd07845          82 SIFLVMEYCEQD-LASLLDNMPTPFSESQVKCLMLQLLRGLQYLHENFI  129 (309)
T ss_pred             eEEEEEecCCCC-HHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCe
Confidence            689999999874 7776654 4578999999999999999999998763

Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing

>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1

Probab=99.83  E-value=1.2e-18  Score=113.21  Aligned_cols=119  Identities=14%  Similarity=0.185  Sum_probs=103.8

Q ss_pred             cccccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeEEEE
Q psy8006           4 IKNIISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILL   83 (126)
Q Consensus         4 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~~lv   83 (126)
                      ..+|...+.+|+|++|.||++.+..++..+++|.+......  ....+.+|+.+++.+.| ||++++.+.+..+...++|
T Consensus        19 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~--~~~~~~~e~~~l~~~~h-~~v~~~~~~~~~~~~~~lv   95 (296)
T cd06654          19 KKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQP--KKELIINEILVMRENKN-PNIVNYLDSYLVGDELWVV   95 (296)
T ss_pred             ccceeeEEEecCCCCeEEEEEEECCCCcEEEEEEEecCCcc--hHHHHHHHHHHHHhCCC-CCEeeEEEEEEeCCEEEEe
Confidence            34667778899999999999999989999999999865432  23458889999999988 9999999999989999999


Q ss_pred             EeccCcccHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          84 LELLTSAVDSKIRESFGSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        84 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      |||+++++|.+++.. ..+++.++..++.|++.|++|||..++
T Consensus        96 ~e~~~~~~L~~~~~~-~~~~~~~~~~i~~ql~~aL~~LH~~gi  137 (296)
T cd06654          96 MEYLAGGSLTDVVTE-TCMDEGQIAAVCRECLQALEFLHSNQV  137 (296)
T ss_pred             ecccCCCCHHHHHHh-cCCCHHHHHHHHHHHHHHHHHHHHCCc
Confidence            999999999988865 458899999999999999999998874

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase

Probab=99.83  E-value=8.1e-19  Score=113.62  Aligned_cols=121  Identities=16%  Similarity=0.197  Sum_probs=104.9

Q ss_pred             ccccccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeEEE
Q psy8006           3 NIKNIISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMIL   82 (126)
Q Consensus         3 ~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~~l   82 (126)
                      +.++|...+.||.|+||.||++.+..++..+++|.+....  ......+.+|+.++..++| ||++++.+.+..++..++
T Consensus        10 ~~~~y~i~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~--~~~~~~~~~e~~~l~~l~h-~~i~~~~~~~~~~~~~~l   86 (292)
T cd06644          10 PNEVWEIIGELGDGAFGKVYKAKNKETGALAAAKVIETKS--EEELEDYMVEIEILATCNH-PYIVKLLGAFYWDGKLWI   86 (292)
T ss_pred             cchhhhhhheecCCCCeEEEEEEECCCCceEEEEEeccCC--HHHHHHHHHHHHHHHhCCC-CcEeeeEEEEEeCCeEEE
Confidence            4466777889999999999999999999999999987542  2334568889999999998 999999999999999999


Q ss_pred             EEeccCcccHHHHHHh-cCCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          83 LLELLTSAVDSKIRES-FGSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        83 v~e~~~~~~L~~~~~~-~~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      +|||+++++|..++.+ ...+++..+..++.|++.++.|||+.++
T Consensus        87 v~e~~~~~~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~~i  131 (292)
T cd06644          87 MIEFCPGGAVDAIMLELDRGLTEPQIQVICRQMLEALQYLHSMKI  131 (292)
T ss_pred             EEecCCCCcHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhcCCe
Confidence            9999999999877654 4568999999999999999999998763

Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.

>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3

Probab=99.83  E-value=1.8e-19  Score=118.90  Aligned_cols=121  Identities=10%  Similarity=0.100  Sum_probs=96.3

Q ss_pred             ccccceeeccCccceeEEEEEE-----ccCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCC-
Q psy8006           5 KNIISSIINDMGKYATVRRCRD-----RKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSH-   78 (126)
Q Consensus         5 ~~~~~~~~lg~g~~~~v~~~~~-----~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~-   78 (126)
                      ++|...+.||+|+||.||+|.+     ..++..+|+|.+..... ......+.+|+.++..+.+||||+++++.+...+ 
T Consensus         7 ~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~   85 (338)
T cd05102           7 DRLRLGKVLGHGAFGKVVEASAFGIDKKSSCNTVAVKMLKEGAT-ASEHKALMSELKILIHIGNHLNVVNLLGACTKPNG   85 (338)
T ss_pred             hHceeeeEeccCCcceEEEEEEeccCCcccchhhheeccccccc-hHHHHHHHHHHHHHHHhccCcceeeEEeEecCCCC
Confidence            3677789999999999999975     23456799999875432 2334468999999999943499999999887544 


Q ss_pred             eEEEEEeccCcccHHHHHHhc-----------------------------------------------------------
Q psy8006          79 DMILLLELLTSAVDSKIRESF-----------------------------------------------------------   99 (126)
Q Consensus        79 ~~~lv~e~~~~~~L~~~~~~~-----------------------------------------------------------   99 (126)
                      ..+++|||+++|+|.+++...                                                           
T Consensus        86 ~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  165 (338)
T cd05102          86 PLMVIVEFCKYGNLSNFLRAKREFFSPYREKSPKQRGRFRAMVEQSRVDRRIEAGQASVLFSRFQPSTSGSTNPPQETDD  165 (338)
T ss_pred             ceEEEEecCCCCcHHHHHHhcchhcccccccchhhhhhhhhhhhhhccccccccccCCccccccccccCcccccchhccc
Confidence            689999999999998887642                                                           


Q ss_pred             ---CCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006         100 ---GSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus       100 ---~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                         ..++...+..++.|++.|++|||+.++
T Consensus       166 ~~~~~l~~~~~~~~~~qi~~aL~~LH~~~i  195 (338)
T cd05102         166 LWKSPLTMEDLICYSFQVARGMEFLASRKC  195 (338)
T ss_pred             cccCCCCHHHHHHHHHHHHHHHHHHHHCCE
Confidence               236778889999999999999998763

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V

>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1

Probab=99.83  E-value=2.1e-19  Score=115.32  Aligned_cols=121  Identities=17%  Similarity=0.212  Sum_probs=106.0

Q ss_pred             ccccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCc-hhHHHHHHHHHHHHHhc-CCCCceeeeeeeEeCCeEEE
Q psy8006           5 KNIISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRST-DLKAEILHEVAVLEACR-CNSRIVQLHQVFESSHDMIL   82 (126)
Q Consensus         5 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~-~~~~~~~~e~~~l~~~~-~~~~iv~l~~~~~~~~~~~l   82 (126)
                      ++|...+.||+|++|.||++.+..++..+++|.+....... .....+.+|..++.+++ | ||++++++.+..++..++
T Consensus         1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~~~~l~~~-~~i~~~~~~~~~~~~~~l   79 (280)
T cd05581           1 DDFKFGKIIGEGSFSTVVLAKEKETNKEYAIKILDKRQLIKEKKVKYVKIEKEVLTRLNGH-PGIIKLYYTFQDEENLYF   79 (280)
T ss_pred             CCceEeeeecCCCceEEEEEEEcCCCCEEEEEEechHhccchHHHHHHHHHHHHHHhcccC-CCchhHHHHhcCCceEEE
Confidence            35777889999999999999999999999999997654322 22345888999999998 6 999999999998999999


Q ss_pred             EEeccCcccHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          83 LLELLTSAVDSKIRESFGSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        83 v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      +||++++++|.+++...+.+++..+..++.|++.++.+||+.++
T Consensus        80 v~e~~~~~~L~~~l~~~~~l~~~~~~~i~~ql~~~l~~Lh~~~~  123 (280)
T cd05581          80 VLEYAPNGELLQYIRKYGSLDEKCTRFYAAEILLALEYLHSKGI  123 (280)
T ss_pred             EEcCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence            99999999999999887789999999999999999999998763

Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto

>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases

Probab=99.83  E-value=7.4e-19  Score=114.93  Aligned_cols=120  Identities=15%  Similarity=0.130  Sum_probs=105.0

Q ss_pred             cccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCc-hhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeEEEEE
Q psy8006           6 NIISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRST-DLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLL   84 (126)
Q Consensus         6 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~-~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~~lv~   84 (126)
                      +|...+.||+|++|.||.+.+..++..+|+|.+....... .....+..|++++..++| |+++++++.+......+++|
T Consensus         2 ~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~-~~i~~~~~~~~~~~~~~lv~   80 (316)
T cd05574           2 HFKKIKLLGKGDVGRVFLVRLKGTGKLFALKVLDKKEMIKRNKVKRVLTEQEILATLDH-PFLPTLYASFQTETYLCLVM   80 (316)
T ss_pred             ceEEeeeecCCccEEEEEEEEcCCCcEEEEEEEeccccchHHHHHHHHHHHHHHHhCCC-CCchhheeeeecCCEEEEEE
Confidence            5667789999999999999999999999999998765432 234458899999999998 99999999999999999999


Q ss_pred             eccCcccHHHHHHhc--CCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          85 ELLTSAVDSKIRESF--GSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        85 e~~~~~~L~~~~~~~--~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      ||+.+++|.+++...  ..+++..+..++.|++.+++|||+.++
T Consensus        81 e~~~~~~L~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i  124 (316)
T cd05574          81 DYCPGGELFRLLQRQPGKCLSEEVARFYAAEVLLALEYLHLLGI  124 (316)
T ss_pred             EecCCCCHHHHHHhCCCCccCHHHHHHHHHHHHHHHHHHHHCCe
Confidence            999999999888753  468999999999999999999998763

Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin

>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases

Probab=99.83  E-value=6.5e-19  Score=113.92  Aligned_cols=121  Identities=19%  Similarity=0.211  Sum_probs=103.1

Q ss_pred             ccccccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeEEE
Q psy8006           3 NIKNIISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMIL   82 (126)
Q Consensus         3 ~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~~l   82 (126)
                      .+++|...+.||+|++|.||++.+..++..+|+|.+....... ....+.+|+.+++.++| ||++++++.+..+...++
T Consensus         3 ~~~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~-~~~~~~~E~~~l~~l~h-~~i~~~~~~~~~~~~~~l   80 (291)
T cd07844           3 KLETYKKLDKLGEGSYATVYKGRSKLTGQLVALKEIRLEHEEG-APFTAIREASLLKDLKH-ANIVTLHDIIHTKKTLTL   80 (291)
T ss_pred             CccceeEEEEEeecCCeEEEEEEEcCCCcEEEEEEEecccccC-CchhHHHHHHHHhhCCC-cceeeEEEEEecCCeEEE
Confidence            3567888899999999999999999899999999997653221 22346789999999998 999999999999999999


Q ss_pred             EEeccCcccHHHHHHh-cCCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          83 LLELLTSAVDSKIRES-FGSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        83 v~e~~~~~~L~~~~~~-~~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      ||||+++ +|.+++.. ...+++..+..++.|++.|+.|||+.++
T Consensus        81 v~e~~~~-~L~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~~~i  124 (291)
T cd07844          81 VFEYLDT-DLKQYMDDCGGGLSMHNVRLFLFQLLRGLAYCHQRRV  124 (291)
T ss_pred             EEecCCC-CHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCe
Confidence            9999986 58777764 3468999999999999999999998764

Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the

>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3

Probab=99.83  E-value=1.4e-18  Score=110.38  Aligned_cols=118  Identities=11%  Similarity=0.098  Sum_probs=101.8

Q ss_pred             ccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeEEEEEec
Q psy8006           7 IISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLLEL   86 (126)
Q Consensus         7 ~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~~lv~e~   86 (126)
                      |...+.+|+|+||.||.+.+..++..+++|.++.... ......+.+|+.++..++| ||++++.+.+..++..++++||
T Consensus         2 y~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~-~~~~~~~~~e~~~l~~l~h-~~i~~~~~~~~~~~~~~lv~e~   79 (255)
T cd08219           2 YNVLRVVGEGSFGRALLVQHVNSDQKYAMKEIRLPKS-SSAVEDSRKEAVLLAKMKH-PNIVAFKESFEADGHLYIVMEY   79 (255)
T ss_pred             ceEEEEeeccCCeEEEEEEEcCCCceEEEEEEEcCcc-hHHHHHHHHHHHHHHhCCC-CCcceEEEEEEECCEEEEEEee
Confidence            5567899999999999999999999999999875432 2234467889999999998 9999999999999999999999


Q ss_pred             cCcccHHHHHHh--cCCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          87 LTSAVDSKIRES--FGSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        87 ~~~~~L~~~~~~--~~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      ++++++.+++..  ...+++..+..++.|++.|+.+||+.++
T Consensus        80 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i  121 (255)
T cd08219          80 CDGGDLMQKIKLQRGKLFPEDTILQWFVQMCLGVQHIHEKRV  121 (255)
T ss_pred             CCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHhhCCc
Confidence            999999887764  2458999999999999999999998764

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati

>KOG0578|consensus

Probab=99.83  E-value=3.9e-20  Score=124.86  Aligned_cols=117  Identities=12%  Similarity=0.137  Sum_probs=103.8

Q ss_pred             cccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeEEEEEe
Q psy8006           6 NIISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLLE   85 (126)
Q Consensus         6 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~~lv~e   85 (126)
                      .|..-..+|+|+.|.||.+....++..||+|.+....-..  .+-+.+|+.+|+..+| +|||.+++.|...+.+|+|||
T Consensus       274 ~y~~~~kigqgaSG~vy~A~~~~~~~~VaiK~m~l~~Q~~--keLilnEi~Vm~~~~H-~NiVnfl~Sylv~deLWVVME  350 (550)
T KOG0578|consen  274 KYTDFKKIGQGATGGVYVARKISTKQEVAIKRMDLRKQPK--KELLLNEILVMRDLHH-PNIVNFLDSYLVGDELWVVME  350 (550)
T ss_pred             hhcchhhhccccccceeeeeeccCCceEEEEEEEeccCCc--hhhhHHHHHHHHhccc-hHHHHHHHHhcccceeEEEEe
Confidence            3555678999999999999999999999999999875432  2348899999999999 999999999988899999999


Q ss_pred             ccCcccHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          86 LLTSAVDSKIRESFGSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        86 ~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      |+++|+|.+++.. ..++|.++..++++++.||+|||..++
T Consensus       351 ym~ggsLTDvVt~-~~~~E~qIA~Icre~l~aL~fLH~~gI  390 (550)
T KOG0578|consen  351 YMEGGSLTDVVTK-TRMTEGQIAAICREILQGLKFLHARGI  390 (550)
T ss_pred             ecCCCchhhhhhc-ccccHHHHHHHHHHHHHHHHHHHhcce
Confidence            9999999999886 449999999999999999999998764

>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta

Probab=99.82  E-value=5.5e-19  Score=116.20  Aligned_cols=115  Identities=14%  Similarity=0.165  Sum_probs=99.1

Q ss_pred             eeccCc--cceeEEEEEEccCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeEEEEEeccC
Q psy8006          11 IINDMG--KYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLLELLT   88 (126)
Q Consensus        11 ~~lg~g--~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~~lv~e~~~   88 (126)
                      ..||+|  +|+.||.+.+..++..+|+|.+..........+.+.+|+.++..++| |||+++++.+..++..++++||+.
T Consensus         4 ~~ig~g~~~~~~v~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~h-~niv~~~~~~~~~~~~~~v~e~~~   82 (328)
T cd08226           4 VEIGRGFCNLTSVYLARHTPTGTLVTVRITDLENCTEEHLKALQNEVVLSHFFRH-PNIMTSWTVFTTGSWLWVISPFMA   82 (328)
T ss_pred             HHhCCcccCceeEEEEEEcCCCcEEEEEEeccccCCHHHHHHHHHHHHHHHhCCC-CCcceEeeeEecCCceEEEEeccc
Confidence            346666  89999999999999999999998765444444568889999988998 999999999999999999999999


Q ss_pred             cccHHHHHHhc--CCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          89 SAVDSKIRESF--GSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        89 ~~~L~~~~~~~--~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      ++++.+++...  ..+++..+..++.|++.|++|||+.++
T Consensus        83 ~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~i  122 (328)
T cd08226          83 YGSANSLLKTYFPEGMSEALIGNILFGALRGLNYLHQNGY  122 (328)
T ss_pred             CCCHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHhCCe
Confidence            99998888753  358999999999999999999998764

Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig

>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5

Probab=99.82  E-value=4.7e-19  Score=112.50  Aligned_cols=120  Identities=11%  Similarity=0.080  Sum_probs=104.1

Q ss_pred             cccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeEEEEEe
Q psy8006           6 NIISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLLE   85 (126)
Q Consensus         6 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~~lv~e   85 (126)
                      +|...+.+|+|+||.||++....++..+++|.+............+.+|+.+++.++| +|++++++.+...+..++++|
T Consensus         1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~~~h-~~i~~~~~~~~~~~~~~lv~e   79 (257)
T cd08225           1 RYEIIKKIGEGSFGKIYLAKAKSDSEHCVIKEIDLTKMPVKEKEASKKEVILLAKMKH-PNIVTFFASFQENGRLFIVME   79 (257)
T ss_pred             CceEEEEecCCCcceEEEEEEcCCCceEEEEEeeHhhccchhhHHHHHHHHHHHhCCC-CChhhhhheeccCCeEEEEEe
Confidence            3566788999999999999999999999999998765443444568899999999998 999999999999999999999


Q ss_pred             ccCcccHHHHHHhcC--CCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          86 LLTSAVDSKIRESFG--SKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        86 ~~~~~~L~~~~~~~~--~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      |+++++|.+++....  .+++..+..++.|++.|+.|||..++
T Consensus        80 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i  122 (257)
T cd08225          80 YCDGGDLMKRINRQRGVLFSEDQILSWFVQISLGLKHIHDRKI  122 (257)
T ss_pred             cCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCc
Confidence            999999988886532  57899999999999999999998763

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.

>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase

Probab=99.82  E-value=1.2e-18  Score=111.15  Aligned_cols=119  Identities=18%  Similarity=0.179  Sum_probs=104.2

Q ss_pred             cccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeEEEEEe
Q psy8006           6 NIISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLLE   85 (126)
Q Consensus         6 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~~lv~e   85 (126)
                      +|...+.+|.|++|.||++....++..+++|.+....... ....+.+|+.+++.++| ++++++++.+..++..++++|
T Consensus         2 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~-~~~~~~~e~~~l~~l~~-~~i~~~~~~~~~~~~~~iv~e   79 (267)
T cd06610           2 DYELIEVIGVGATAVVYAAICLPNNEKVAIKRIDLEKCQT-SVDELRKEVQAMSQCNH-PNVVKYYTSFVVGDELWLVMP   79 (267)
T ss_pred             cceeeeeecCCCCeEEEEEEEcCCCcEEEEEEeccCCcch-HHHHHHHHHHHHHhcCC-CCEEEEEEEEeeCCEEEEEEe
Confidence            5677889999999999999988889999999987655433 34568999999999998 999999999999999999999


Q ss_pred             ccCcccHHHHHHhc---CCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          86 LLTSAVDSKIRESF---GSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        86 ~~~~~~L~~~~~~~---~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      ++++++|.+++...   ..+++..+..++.|++.|+++||+.++
T Consensus        80 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lh~~~i  123 (267)
T cd06610          80 YLSGGSLLDIMKSSYPRGGLDEAIIATVLKEVLKGLEYLHSNGQ  123 (267)
T ss_pred             ccCCCcHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhCCe
Confidence            99999999888753   458999999999999999999998764

Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1

>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=99.82  E-value=1.3e-18  Score=111.19  Aligned_cols=121  Identities=17%  Similarity=0.207  Sum_probs=102.4

Q ss_pred             ccccceeeccCccceeEEEEEEccCCcEEEEEEeecCCC---CchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeC--Ce
Q psy8006           5 KNIISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRR---STDLKAEILHEVAVLEACRCNSRIVQLHQVFESS--HD   79 (126)
Q Consensus         5 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~---~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~--~~   79 (126)
                      .+|...+.||+|++|.||++.+..++..+++|.+.....   .......+.+|+.+++.++| ||++++++.+...  ..
T Consensus         2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~ei~~l~~l~h-~~i~~~~~~~~~~~~~~   80 (264)
T cd06653           2 VNWRLGKLLGRGAFGEVYLCYDADTGRELAVKQVPFDPDSQETSKEVNALECEIQLLKNLRH-DRIVQYYGCLRDPEEKK   80 (264)
T ss_pred             CceeeeeeEccCCCeEEEEEEEcCCCCEEEEEEEecCcccchhhHHHHHHHHHHHHHHHcCC-CCcceEEEEEEcCCCCE
Confidence            367778999999999999999999999999998864321   12233468899999999998 9999999988653  46


Q ss_pred             EEEEEeccCcccHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          80 MILLLELLTSAVDSKIRESFGSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        80 ~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      .++++|++++++|.+++.....+++..+..++.|++.|+.|||+.++
T Consensus        81 ~~~v~e~~~~~~L~~~~~~~~~l~~~~~~~~~~~i~~al~~LH~~~i  127 (264)
T cd06653          81 LSIFVEYMPGGSIKDQLKAYGALTENVTRRYTRQILQGVSYLHSNMI  127 (264)
T ss_pred             EEEEEEeCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCE
Confidence            88999999999999888876778999999999999999999998763

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho

>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors

Probab=99.82  E-value=6e-19  Score=112.88  Aligned_cols=120  Identities=17%  Similarity=0.188  Sum_probs=101.2

Q ss_pred             ccccceeeccCccceeEEEEEEccCC---cEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeEE
Q psy8006           5 KNIISSIINDMGKYATVRRCRDRKNG---TQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMI   81 (126)
Q Consensus         5 ~~~~~~~~lg~g~~~~v~~~~~~~~~---~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~~   81 (126)
                      .+|...+.||+|+||.||++.+..++   ..+|+|.+..... ......+.+|+.++..++| ||++++++.+..++..+
T Consensus         4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~-~~~~~~~~~e~~~l~~l~h-~~i~~~~~~~~~~~~~~   81 (267)
T cd05066           4 SCIKIEKVIGAGEFGEVCSGRLKLPGKREIPVAIKTLKAGYT-EKQRRDFLSEASIMGQFDH-PNIIHLEGVVTKSKPVM   81 (267)
T ss_pred             HHeEeeeeecccCCCceEEEEEecCCCCceEEEEEECCCCCC-HHHHHHHHHHHHHHHhCCC-CCcceEEEEEecCCccE
Confidence            46677889999999999999876444   3689998875432 2334468999999999998 99999999999889999


Q ss_pred             EEEeccCcccHHHHHHhc-CCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          82 LLLELLTSAVDSKIRESF-GSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        82 lv~e~~~~~~L~~~~~~~-~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      ++|||+++++|.+++... ..++..++..++.|++.|+++||+.++
T Consensus        82 lv~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i  127 (267)
T cd05066          82 IVTEYMENGSLDAFLRKHDGQFTVIQLVGMLRGIASGMKYLSDMGY  127 (267)
T ss_pred             EEEEcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCE
Confidence            999999999999888754 468999999999999999999998763

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul

>PTZ00267 NIMA-related protein kinase; Provisional

Probab=99.82  E-value=7.5e-19  Score=120.79  Aligned_cols=117  Identities=15%  Similarity=0.107  Sum_probs=99.6

Q ss_pred             ccceeeccCccceeEEEEEEccC-CcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeEEEEEe
Q psy8006           7 IISSIINDMGKYATVRRCRDRKN-GTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLLE   85 (126)
Q Consensus         7 ~~~~~~lg~g~~~~v~~~~~~~~-~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~~lv~e   85 (126)
                      |...+.+|+|++|.||.+....+ +..+++|.+....  ......+.+|+.++..++| |||+++++.+...+..|+|||
T Consensus        69 y~~~~~lg~G~~g~vy~a~~~~~~~~~vv~K~~~~~~--~~~~~~~~~E~~~l~~l~H-pniv~~~~~~~~~~~~~lv~E  145 (478)
T PTZ00267         69 YVLTTLVGRNPTTAAFVATRGSDPKEKVVAKFVMLND--ERQAAYARSELHCLAACDH-FGIVKHFDDFKSDDKLLLIME  145 (478)
T ss_pred             EEEEEEEEeCCCcEEEEEEEcCCCCeEEEEEEcccCC--HHHHHHHHHHHHHHHhCCC-CCEeEEEEEEEECCEEEEEEE
Confidence            67788999999999999998877 7788898775432  2223357889999999998 999999999999999999999


Q ss_pred             ccCcccHHHHHHh----cCCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          86 LLTSAVDSKIRES----FGSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        86 ~~~~~~L~~~~~~----~~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      |+++++|.+++..    ...+++..+..++.|++.|++|||+.++
T Consensus       146 ~~~gg~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i  190 (478)
T PTZ00267        146 YGSGGDLNKQIKQRLKEHLPFQEYEVGLLFYQIVLALDEVHSRKM  190 (478)
T ss_pred             CCCCCCHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCE
Confidence            9999999877643    3468999999999999999999998764

>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase

Probab=99.82  E-value=1.1e-18  Score=110.51  Aligned_cols=120  Identities=15%  Similarity=0.163  Sum_probs=106.0

Q ss_pred             cccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeEEEEEe
Q psy8006           6 NIISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLLE   85 (126)
Q Consensus         6 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~~lv~e   85 (126)
                      +|...+.+|.|++|.||++.+..++..+++|.+............+.+|+++++.++| ||++++.+.+...+..++++|
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~-~~~~~~~~~~~~~~~~~lv~e   79 (258)
T cd08215           1 KYEIIKQIGKGSFGKVYLVRRKSDGKLYVLKEIDLSNMSEKEREDALNEVKILKKLNH-PNIIKYYESFEEKGKLCIVME   79 (258)
T ss_pred             CceEEeeeccCCCeEEEEEEEcCCCcEEEEEEeecccCChHHHHHHHHHHHHHHhcCC-CChhheEEEEecCCEEEEEEE
Confidence            3556788999999999999999899999999998766554555678899999999998 999999999998899999999


Q ss_pred             ccCcccHHHHHHhc----CCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          86 LLTSAVDSKIRESF----GSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        86 ~~~~~~L~~~~~~~----~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      ++++++|.+++...    ..+++..+..++.|++.++++||+.++
T Consensus        80 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~  124 (258)
T cd08215          80 YADGGDLSQKIKKQKKEGKPFPEEQILDWFVQLCLALKYLHSRKI  124 (258)
T ss_pred             ecCCCcHHHHHHHhhccCCCcCHHHHHHHHHHHHHHHHHHHhCCE
Confidence            99999998888753    679999999999999999999998763

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They

>PTZ00283 serine/threonine protein kinase; Provisional

Probab=99.82  E-value=6.5e-19  Score=121.52  Aligned_cols=122  Identities=18%  Similarity=0.136  Sum_probs=103.5

Q ss_pred             cccccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCC-----
Q psy8006           4 IKNIISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSH-----   78 (126)
Q Consensus         4 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~-----   78 (126)
                      ..+|...+.||+|+||.||++.+..++..+|+|.+............+.+|+.++..++| ++++++++.+...+     
T Consensus        31 ~~rY~i~~~LG~G~fG~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~~~h-~~iv~~~~~~~~~~~~~~~  109 (496)
T PTZ00283         31 AKKYWISRVLGSGATGTVLCAKRVSDGEPFAVKVVDMEGMSEADKNRAQAEVCCLLNCDF-FSIVKCHEDFAKKDPRNPE  109 (496)
T ss_pred             CCCEEEEEEEecCCCEEEEEEEEcCCCCEEEEEEEecccCCHHHHHHHHHHHHHHhcCCC-CcEEEeecceecccccCcc
Confidence            356788899999999999999999999999999998776655555568899999999998 99999887764322     


Q ss_pred             ---eEEEEEeccCcccHHHHHHh----cCCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          79 ---DMILLLELLTSAVDSKIRES----FGSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        79 ---~~~lv~e~~~~~~L~~~~~~----~~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                         .+++||||+++|+|.++++.    ...+++..+..++.|++.|+.|||+.++
T Consensus       110 ~~~~i~lV~Ey~~~gsL~~~l~~~~~~~~~l~e~~~~~i~~qll~aL~~lH~~~I  164 (496)
T PTZ00283        110 NVLMIALVLDYANAGDLRQEIKSRAKTNRTFREHEAGLLFIQVLLAVHHVHSKHM  164 (496)
T ss_pred             cceEEEEEEeCCCCCcHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhCCE
Confidence               37899999999999888864    2468999999999999999999998764

>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase

Probab=99.82  E-value=1.1e-18  Score=111.74  Aligned_cols=118  Identities=15%  Similarity=0.123  Sum_probs=100.8

Q ss_pred             cccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeEEEEEe
Q psy8006           6 NIISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLLE   85 (126)
Q Consensus         6 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~~lv~e   85 (126)
                      +.-....||+|+||.||++.+..++..+++|.+.....  .....+.+|+.++..++| +|++++.+.+..++..++++|
T Consensus         9 ~~~~~~~lg~g~~g~v~~~~~~~~~~~v~~k~~~~~~~--~~~~~~~~e~~~l~~l~h-~~iv~~~~~~~~~~~~~lv~e   85 (268)
T cd06624           9 ENGERVVLGKGTYGIVYAARDLSTQVRIAIKEIPERDS--RYVQPLHEEIALHSYLKH-RNIVQYLGSDSENGFFKIFME   85 (268)
T ss_pred             cCCceEEEecCCceEEEEeEecCCCcEEEEEEecCCCH--HHHHHHHHHHHHHHhcCC-CCeeeeeeeeccCCEEEEEEe
Confidence            34455689999999999999998999999998875432  233468899999999998 999999999999999999999


Q ss_pred             ccCcccHHHHHHhc-CCC--CHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          86 LLTSAVDSKIRESF-GSK--SESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        86 ~~~~~~L~~~~~~~-~~~--~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      |+++++|.+++... ..+  ++..+..++.|++.|++|||..++
T Consensus        86 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i  129 (268)
T cd06624          86 QVPGGSLSALLRSKWGPLKDNEQTIIFYTKQILEGLKYLHDNQI  129 (268)
T ss_pred             cCCCCCHHHHHHHhcccCCCcHHHHHHHHHHHHHHHHHHHHCCE
Confidence            99999999888753 345  888899999999999999998764

Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina

>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases

Probab=99.82  E-value=9.4e-19  Score=111.89  Aligned_cols=120  Identities=17%  Similarity=0.196  Sum_probs=101.7

Q ss_pred             ccccceeeccCccceeEEEEEEccC---CcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeEE
Q psy8006           5 KNIISSIINDMGKYATVRRCRDRKN---GTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMI   81 (126)
Q Consensus         5 ~~~~~~~~lg~g~~~~v~~~~~~~~---~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~~   81 (126)
                      ++|...+.||+|+||.||+|.....   ...+|+|.+..... ......+.+|+.++..++| ||++++++.+...+..+
T Consensus         4 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaik~~~~~~~-~~~~~~~~~e~~~l~~l~h-~~i~~~~~~~~~~~~~~   81 (266)
T cd05033           4 SYVTIEKVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGSS-DKQRLDFLTEASIMGQFDH-PNIIRLEGVVTKSRPVM   81 (266)
T ss_pred             HHceeeeEecCCccceEEEEEEccCCCCcceEEEEEcCCCCC-hHHHHHHHHHHHHHHhCCC-CCcceEeEEEecCCceE
Confidence            4577788999999999999987543   45789998875432 2334468899999999998 99999999999888999


Q ss_pred             EEEeccCcccHHHHHHh-cCCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          82 LLLELLTSAVDSKIRES-FGSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        82 lv~e~~~~~~L~~~~~~-~~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      ++|||+++++|.+++.. ...++...+..++.|++.|++|||+.++
T Consensus        82 iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Lh~~~i  127 (266)
T cd05033          82 IITEYMENGSLDKFLRENDGKFTVGQLVGMLRGIASGMKYLSEMNY  127 (266)
T ss_pred             EEEEcCCCCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCc
Confidence            99999999999988865 3478999999999999999999998764

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment

>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases

Probab=99.82  E-value=8.1e-19  Score=111.79  Aligned_cols=116  Identities=16%  Similarity=0.220  Sum_probs=95.2

Q ss_pred             eeccCccceeEEEEEEccCCcEEEEEEeecCCCCc-hhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeEEEEEeccCc
Q psy8006          11 IINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRST-DLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLLELLTS   89 (126)
Q Consensus        11 ~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~-~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~~lv~e~~~~   89 (126)
                      +.+|+|++|.||+|.+..++..+|+|.++...... ........|..++.....|+|++++++.+...+..|+++||+++
T Consensus         2 ~~l~~g~~~~v~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~   81 (260)
T cd05611           2 KPISKGAFGSVYLAKKRSTGDYFAIKVLKKSDMIAKNQVTNVKAERAIMMIQGESPYVAKLYYSFQSKDYLYLVMEYLNG   81 (260)
T ss_pred             ccCCcCCCeeEEEEEecCCCCeEEEEEecchhhhHHHHHHHHHHHHHHHhhcCCCCCeeeeeeeEEcCCeEEEEEeccCC
Confidence            46899999999999999999999999987654322 11223445555554443349999999999999999999999999


Q ss_pred             ccHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          90 AVDSKIRESFGSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        90 ~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      ++|.++++....+++..+..++.|++.|+.|||+.++
T Consensus        82 ~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~lH~~~i  118 (260)
T cd05611          82 GDCASLIKTLGGLPEDWAKQYIAEVVLGVEDLHQRGI  118 (260)
T ss_pred             CCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence            9999999877789999999999999999999998763

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do

>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3

Probab=99.82  E-value=1.5e-18  Score=112.82  Aligned_cols=118  Identities=15%  Similarity=0.191  Sum_probs=103.3

Q ss_pred             ccccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeEEEEE
Q psy8006           5 KNIISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLL   84 (126)
Q Consensus         5 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~~lv~   84 (126)
                      .+|...+.||+|++|.||++.+..++..+|+|.+......  ....+.+|+.+++.++| ||++++++.+..+...++||
T Consensus        19 ~~y~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~--~~~~~~~e~~~l~~~~h-~~i~~~~~~~~~~~~~~lv~   95 (297)
T cd06656          19 KKYTRFEKIGQGASGTVYTAIDIATGQEVAIKQMNLQQQP--KKELIINEILVMRENKN-PNIVNYLDSYLVGDELWVVM   95 (297)
T ss_pred             hhceeeeeeccCCCeEEEEEEECCCCCEEEEEEEecCccc--hHHHHHHHHHHHHhCCC-CCEeeEEEEEecCCEEEEee
Confidence            5677788999999999999999999999999999765432  23457889999999988 99999999999999999999


Q ss_pred             eccCcccHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          85 ELLTSAVDSKIRESFGSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        85 e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      ||+++++|.+++.+ ..+++..+..++.|++.++.|||+.++
T Consensus        96 e~~~~~~L~~~~~~-~~~~~~~~~~~~~~l~~~L~~LH~~~i  136 (297)
T cd06656          96 EYLAGGSLTDVVTE-TCMDEGQIAAVCRECLQALDFLHSNQV  136 (297)
T ss_pred             cccCCCCHHHHHHh-CCCCHHHHHHHHHHHHHHHHHHHHCCc
Confidence            99999999988865 458899999999999999999998764

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor

Probab=99.82  E-value=2.4e-19  Score=119.95  Aligned_cols=120  Identities=12%  Similarity=0.068  Sum_probs=98.8

Q ss_pred             ccccceeeccCccceeEEEEEEccC-----CcEEEEEEeecCCCCchhHHHHHHHHHHHHHh-cCCCCceeeeeeeEeCC
Q psy8006           5 KNIISSIINDMGKYATVRRCRDRKN-----GTQYAAKFLRKKRRSTDLKAEILHEVAVLEAC-RCNSRIVQLHQVFESSH   78 (126)
Q Consensus         5 ~~~~~~~~lg~g~~~~v~~~~~~~~-----~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~-~~~~~iv~l~~~~~~~~   78 (126)
                      ++|...+.||+|+||.||++.+..+     +..+|+|.+...... .....+.+|+.++..+ +| +||+++++.+...+
T Consensus        38 ~~~~~~~~LG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~E~~il~~l~~h-~nIv~~~~~~~~~~  115 (374)
T cd05106          38 DNLQFGKTLGAGAFGKVVEATAFGLGKEDNVLRVAVKMLKASAHT-DEREALMSELKILSHLGQH-KNIVNLLGACTHGG  115 (374)
T ss_pred             HHceehheecCCCcccEEEEEEecCCcccccceeEEEeccCCCCH-HHHHHHHHHHHHHHhhccC-CceeeEeeEecCCC
Confidence            4577789999999999999986443     357999999765432 2344688999999999 56 99999999999999


Q ss_pred             eEEEEEeccCcccHHHHHHhc-----------------------------------------------------------
Q psy8006          79 DMILLLELLTSAVDSKIRESF-----------------------------------------------------------   99 (126)
Q Consensus        79 ~~~lv~e~~~~~~L~~~~~~~-----------------------------------------------------------   99 (126)
                      ..+++|||+++|+|.+++...                                                           
T Consensus       116 ~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  195 (374)
T cd05106         116 PVLVITEYCCYGDLLNFLRKKAETFLNFVMALPEISETSSDYKNITLEKKYIRSDSGFSSQGSDTYVEMRPVSSSSSQSS  195 (374)
T ss_pred             CeEEeHhhccCCcHHHHHHhhhhhhccccccccccccccccccccchhcccccccccccccccccccccCCccccccccc
Confidence            999999999999998887531                                                           


Q ss_pred             -----------CCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006         100 -----------GSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus       100 -----------~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                                 ..++...+..++.|++.|++|||+.++
T Consensus       196 ~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~gi  233 (374)
T cd05106         196 DSKDEEDTEDSWPLDLDDLLRFSSQVAQGMDFLASKNC  233 (374)
T ss_pred             cccchhccCCCCCcCHHHHHHHHHHHHHHHHHHHHCCE
Confidence                       136778899999999999999998764

Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti

>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase

Probab=99.82  E-value=1.8e-18  Score=109.58  Aligned_cols=119  Identities=15%  Similarity=0.192  Sum_probs=105.2

Q ss_pred             ccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeC--CeEEEEE
Q psy8006           7 IISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESS--HDMILLL   84 (126)
Q Consensus         7 ~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~--~~~~lv~   84 (126)
                      |...+.||+|++|.||.+.+..++..+++|.+............+.+|+..+++++| |+++++.+.+...  ...++++
T Consensus         2 ~~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~-~~i~~~~~~~~~~~~~~~~lv~   80 (260)
T cd06606           2 WTRGELLGRGSFGSVYLALDKDTGELMAVKSVELSGDSEEELEALEREIRILSSLQH-PNIVRYYGSERDEEKNTLNIFL   80 (260)
T ss_pred             ceeeeEeeecCceEEEEEEECCCCcEEEEEEeeccccchHHHHHHHHHHHHHHHcCC-CCEeeEEEEEecCCCCeEEEEE
Confidence            556789999999999999999899999999998765433344568999999999998 9999999999887  8899999


Q ss_pred             eccCcccHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          85 ELLTSAVDSKIRESFGSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        85 e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      |++++++|.+++.....+++..+..++.|++.+++|||+.++
T Consensus        81 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~  122 (260)
T cd06606          81 EYVSGGSLSSLLKKFGKLPEPVIRKYTRQILEGLAYLHSNGI  122 (260)
T ss_pred             EecCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCc
Confidence            999999999998876689999999999999999999998763

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK

>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3

Probab=99.82  E-value=4.7e-19  Score=114.15  Aligned_cols=119  Identities=17%  Similarity=0.241  Sum_probs=101.6

Q ss_pred             cccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeEEEEEe
Q psy8006           6 NIISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLLE   85 (126)
Q Consensus         6 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~~lv~e   85 (126)
                      ||...+.||+|++|.||++.+..++..+++|.+............+.+|++++.+++| ||++++.+.+...+..+++||
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~h-~~i~~~~~~~~~~~~~~~v~e   79 (284)
T cd07860           1 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH-PNIVKLLDVIHTENKLYLVFE   79 (284)
T ss_pred             CceeeeeecCCCceEEEEEEECCCCCEEEEEEccccccccccchHHHHHHHHHHhcCC-CCCcchhhhcccCCcEEEEee
Confidence            4667788999999999999999999999999987654433334568899999999998 999999999998899999999


Q ss_pred             ccCcccHHHHHHh--cCCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          86 LLTSAVDSKIRES--FGSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        86 ~~~~~~L~~~~~~--~~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      |+.+ +|..++..  ...+++..+..++.|++.|++|||+.++
T Consensus        80 ~~~~-~l~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~i  121 (284)
T cd07860          80 FLHQ-DLKKFMDASPLSGIPLPLIKSYLFQLLQGLAFCHSHRV  121 (284)
T ss_pred             cccc-CHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence            9975 57777654  3568999999999999999999998763

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex

>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1

Probab=99.82  E-value=9.3e-19  Score=113.20  Aligned_cols=121  Identities=22%  Similarity=0.221  Sum_probs=102.4

Q ss_pred             cccceeeccCccceeEEEEEEc---cCCcEEEEEEeecCCCC--chhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeE
Q psy8006           6 NIISSIINDMGKYATVRRCRDR---KNGTQYAAKFLRKKRRS--TDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDM   80 (126)
Q Consensus         6 ~~~~~~~lg~g~~~~v~~~~~~---~~~~~~aiK~~~~~~~~--~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~   80 (126)
                      +|...+.||+|+||.||.+.+.   .+|..+|+|.+......  ......+.+|+.++..+.+|++++++++.+..+...
T Consensus         1 ~y~~~~~lg~G~~g~v~~~~~~~~~~~g~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~   80 (290)
T cd05613           1 NFELLKVLGTGAYGKVFLVRKVSGHDSGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTDTKL   80 (290)
T ss_pred             CceeeeeeccCCcceEEEEEeccCCCCCceEEEEEeehhhhhhcchHHHHHHHHHHHHHhcccCCChhceeeEeecCCeE
Confidence            4566788999999999999874   47889999999764331  122345788999999996559999999999988899


Q ss_pred             EEEEeccCcccHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          81 ILLLELLTSAVDSKIRESFGSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        81 ~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      ++++||+++++|.+++.....+++..+..++.|++.|+.|||+.++
T Consensus        81 ~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~al~~lH~~~i  126 (290)
T cd05613          81 HLILDYINGGELFTHLSQRERFKEQEVQIYSGEIVLALEHLHKLGI  126 (290)
T ss_pred             EEEEecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCe
Confidence            9999999999999988877789999999999999999999998764

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph

>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors

Probab=99.82  E-value=7.5e-19  Score=112.50  Aligned_cols=120  Identities=16%  Similarity=0.204  Sum_probs=102.0

Q ss_pred             ccccceeeccCccceeEEEEEEccCCc---EEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeEE
Q psy8006           5 KNIISSIINDMGKYATVRRCRDRKNGT---QYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMI   81 (126)
Q Consensus         5 ~~~~~~~~lg~g~~~~v~~~~~~~~~~---~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~~   81 (126)
                      ..+...+.||+|+||.||+|....++.   .+++|.+.... .......+..|+.+++.++| ||++++++.+..+...+
T Consensus         4 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~e~~~l~~l~h-~ni~~~~~~~~~~~~~~   81 (269)
T cd05065           4 SCVKIEEVIGAGEFGEVCRGRLKLPGKREIFVAIKTLKSGY-TEKQRRDFLSEASIMGQFDH-PNIIHLEGVVTKSRPVM   81 (269)
T ss_pred             HHeEEEeEecCCCCCeEEEEEEecCCCCceeEEEEEcCCCC-CHHHHHHHHHHHHHHHhCCC-cCcceEEEEECCCCceE
Confidence            346678899999999999999876654   69999987543 23334579999999999998 99999999999888999


Q ss_pred             EEEeccCcccHHHHHHh-cCCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          82 LLLELLTSAVDSKIRES-FGSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        82 lv~e~~~~~~L~~~~~~-~~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      ++|||+++++|.+++.. .+.++..++..++.|++.|++|||+.++
T Consensus        82 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~l~~al~~lH~~g~  127 (269)
T cd05065          82 IITEFMENGALDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLSEMNY  127 (269)
T ss_pred             EEEecCCCCcHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHHCCE
Confidence            99999999999888875 3568999999999999999999998763

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr

>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase

Probab=99.82  E-value=6.8e-19  Score=112.09  Aligned_cols=113  Identities=19%  Similarity=0.249  Sum_probs=96.1

Q ss_pred             eccCccceeEEEEEE--ccCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeEEEEEeccCc
Q psy8006          12 INDMGKYATVRRCRD--RKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLLELLTS   89 (126)
Q Consensus        12 ~lg~g~~~~v~~~~~--~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~~lv~e~~~~   89 (126)
                      .||+|+||.||+|..  ..++..+|+|.+............+.+|+.++..++| ||++++++.+. ....+++|||+++
T Consensus         2 ~lg~G~~g~v~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~h-~~i~~~~~~~~-~~~~~lv~e~~~~   79 (257)
T cd05116           2 ELGSGNFGTVKKGMYKMKKSEKTVAVKILKNDNNDPALKDELLREANVMQQLDN-PYIVRMIGICE-AESWMLVMELAEL   79 (257)
T ss_pred             cCCCcCCcceEEeEEecCCCceEEEEEEccCCCCcHHHHHHHHHHHHHHHhCCC-CCcceEEEEEc-CCCcEEEEecCCC
Confidence            589999999999964  4567889999987654444445568999999999998 99999998875 4467899999999


Q ss_pred             ccHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          90 AVDSKIRESFGSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        90 ~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      ++|.+++.....+++..+..++.|++.|++|||+.++
T Consensus        80 ~~L~~~l~~~~~~~~~~~~~i~~qi~~al~~lH~~~i  116 (257)
T cd05116          80 GPLNKFLQKNKHVTEKNITELVHQVSMGMKYLEETNF  116 (257)
T ss_pred             CcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCE
Confidence            9999998877789999999999999999999998763

Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio

>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5

Probab=99.82  E-value=1.5e-18  Score=111.78  Aligned_cols=115  Identities=15%  Similarity=0.151  Sum_probs=98.8

Q ss_pred             cccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeEEEEEe
Q psy8006           6 NIISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLLE   85 (126)
Q Consensus         6 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~~lv~e   85 (126)
                      +|...++||+|++|.||++.+..++..+|+|.+..... ......+.+|+.++.+++| ||++++++.+..++..++++|
T Consensus         2 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~-~~~~~~~~~E~~~l~~l~h-~~iv~~~~~~~~~~~~~lv~e   79 (279)
T cd06619           2 DIQYQEILGHGNGGTVYKAYHLLTRRILAVKVIPLDIT-VELQKQIMSELEILYKCDS-PYIIGFYGAFFVENRISICTE   79 (279)
T ss_pred             cchheeeeccCCCeEEEEEEEcCCCcEEEEEEEecCCC-hHHHHHHHHHHHHHHhCCC-CCeeeEEEEEEECCEEEEEEe
Confidence            45567889999999999999999999999999875432 2334468899999999998 999999999999999999999


Q ss_pred             ccCcccHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          86 LLTSAVDSKIRESFGSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        86 ~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      |+++++|..+    ..+++..+..++.|++.|++|||+.++
T Consensus        80 ~~~~~~l~~~----~~~~~~~~~~~~~qi~~~l~~lH~~~i  116 (279)
T cd06619          80 FMDGGSLDVY----RKIPEHVLGRIAVAVVKGLTYLWSLKI  116 (279)
T ss_pred             cCCCCChHHh----hcCCHHHHHHHHHHHHHHHHHHHHCCE
Confidence            9999988543    347889999999999999999998764

Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p

>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases

Probab=99.82  E-value=8.4e-19  Score=111.34  Aligned_cols=114  Identities=15%  Similarity=0.124  Sum_probs=100.4

Q ss_pred             eeccCccceeEEEEEEccC---CcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeEEEEEecc
Q psy8006          11 IINDMGKYATVRRCRDRKN---GTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLLELL   87 (126)
Q Consensus        11 ~~lg~g~~~~v~~~~~~~~---~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~~lv~e~~   87 (126)
                      +.||+|+||.||++.....   +..+++|.+....... ....+.+|+..+..++| ++++++++.+......+++|||+
T Consensus         1 ~~ig~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~-~~~~~~~e~~~l~~~~~-~~i~~~~~~~~~~~~~~lv~e~~   78 (262)
T cd00192           1 KKLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDASEE-ERKDFLKEARVMKKLGH-PNVVRLLGVCTEEEPLYLVLEYM   78 (262)
T ss_pred             CccccCCceEEEEEEEecCCCCCceEEeEeeccccchh-HHHHHHHHHHHHhhcCC-CChheeeeeecCCCceEEEEEec
Confidence            4689999999999998765   8899999998765433 34568999999999997 99999999999888999999999


Q ss_pred             CcccHHHHHHhc---------CCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          88 TSAVDSKIRESF---------GSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        88 ~~~~L~~~~~~~---------~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      ++++|.+++...         ..+++..+..++.|++.|++|||+.++
T Consensus        79 ~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i  126 (262)
T cd00192          79 EGGDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEYLASKKF  126 (262)
T ss_pred             cCCcHHHHHhhccccccccccccCCHHHHHHHHHHHHHHHHHHHcCCc
Confidence            999999998764         679999999999999999999998764

Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan

>PLN00009 cyclin-dependent kinase A; Provisional

Probab=99.82  E-value=1.2e-18  Score=112.91  Aligned_cols=120  Identities=19%  Similarity=0.236  Sum_probs=100.9

Q ss_pred             ccccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeEEEEE
Q psy8006           5 KNIISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLL   84 (126)
Q Consensus         5 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~~lv~   84 (126)
                      ++|...+.||+|.+|.||++.+..++..+++|.+............+.+|+.+++.++| ||++++++.+..+...++||
T Consensus         2 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h-~~i~~~~~~~~~~~~~~lv~   80 (294)
T PLN00009          2 DQYEKVEKIGEGTYGVVYKARDRVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQH-GNIVRLQDVVHSEKRLYLVF   80 (294)
T ss_pred             CceEEEEEecCCCCEEEEEEEecCCCcEEEEEehhhccccccchHHHHHHHHHHHhccC-CCEeeEEEEEecCCeEEEEE
Confidence            56777889999999999999999899999999987654433334467889999999998 99999999999999999999


Q ss_pred             eccCcccHHHHHHhcC--CCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          85 ELLTSAVDSKIRESFG--SKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        85 e~~~~~~L~~~~~~~~--~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      ||++++ +.+.+....  .+++..+..++.|++.|++|||+.++
T Consensus        81 e~~~~~-l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~i  123 (294)
T PLN00009         81 EYLDLD-LKKHMDSSPDFAKNPRLIKTYLYQILRGIAYCHSHRV  123 (294)
T ss_pred             eccccc-HHHHHHhCCCCCcCHHHHHHHHHHHHHHHHHHHhCCe
Confidence            999764 766665433  36788889999999999999998763

>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases

Probab=99.82  E-value=1.4e-18  Score=111.48  Aligned_cols=118  Identities=14%  Similarity=0.155  Sum_probs=103.2

Q ss_pred             cccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeEEEEEe
Q psy8006           6 NIISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLLE   85 (126)
Q Consensus         6 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~~lv~e   85 (126)
                      +|...+.||.|++|.||++.+..++..+++|.+..... ......+.+|+.+++.++| ||++++.+.+..+...++++|
T Consensus         2 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~-~~~~~~~~~e~~~l~~l~h-~~i~~~~~~~~~~~~~~~v~e   79 (274)
T cd06609           2 LFTLLECIGKGSFGEVYKAIDKRTNQVVAIKVIDLEEA-EDEIEDIQQEIQFLSQCRS-PYITKYYGSFLKGSKLWIIME   79 (274)
T ss_pred             hhhhhhhhcCCCCeEEEEEEECCCCeEEEEEEeecccc-chHHHHHHHHHHHHHHcCC-CCeeeeeEEEEECCeEEEEEE
Confidence            45667789999999999999999999999999876542 2233468899999999998 999999999999999999999


Q ss_pred             ccCcccHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          86 LLTSAVDSKIRESFGSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        86 ~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      ++++++|.+++... .+++..+..++.|++.++.|||+.++
T Consensus        80 ~~~~~~L~~~~~~~-~~~~~~~~~~~~ql~~~l~~lh~~~i  119 (274)
T cd06609          80 YCGGGSCLDLLKPG-KLDETYIAFILREVLLGLEYLHEEGK  119 (274)
T ss_pred             eeCCCcHHHHHhhc-CCCHHHHHHHHHHHHHHHHHHHhCCc
Confidence            99999999888764 78999999999999999999998763

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)

>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase

Probab=99.82  E-value=1e-18  Score=111.20  Aligned_cols=117  Identities=14%  Similarity=0.126  Sum_probs=99.1

Q ss_pred             ccccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeEEEEE
Q psy8006           5 KNIISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLL   84 (126)
Q Consensus         5 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~~lv~   84 (126)
                      +.|...+.||+|+||.||++.... +..+|+|.+......   ...+.+|+.+++.++| ||++++++.+...+..+++|
T Consensus         4 ~~~~~~~~lg~G~~~~vy~~~~~~-~~~~a~K~~~~~~~~---~~~~~~e~~~l~~l~h-~~i~~~~~~~~~~~~~~iv~   78 (256)
T cd05114           4 SELTFMKELGSGQFGVVHLGKWRA-QIKVAIKAINEGAMS---EEDFIEEAKVMMKLSH-PKLVQLYGVCTQQKPLYIVT   78 (256)
T ss_pred             HHcEEeeEecCCcCceEEEEEecc-CceEEEEecccCCcc---HHHHHHHHHHHHHCCC-CCceeEEEEEccCCCEEEEE
Confidence            446667889999999999997754 567999988754332   3368889999999998 99999999999889999999


Q ss_pred             eccCcccHHHHHHh-cCCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          85 ELLTSAVDSKIRES-FGSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        85 e~~~~~~L~~~~~~-~~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      ||+++++|.+++.. ...+++..+..++.|++.|++|||+.++
T Consensus        79 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i  121 (256)
T cd05114          79 EFMENGCLLNYLRQRQGKLSKDMLLSMCQDVCEGMEYLERNSF  121 (256)
T ss_pred             EcCCCCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHCCc
Confidence            99999999888864 3468999999999999999999998764

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h

>KOG1989|consensus

Probab=99.82  E-value=3.7e-19  Score=124.82  Aligned_cols=118  Identities=15%  Similarity=0.198  Sum_probs=99.0

Q ss_pred             cccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeee-eE---eC---C
Q psy8006           6 NIISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQV-FE---SS---H   78 (126)
Q Consensus         6 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~-~~---~~---~   78 (126)
                      ++...++|.+|+|+.||.+.+...+..+|+|.+-..  +......+.+|+++|+.++.|+|||.+++. ..   ..   -
T Consensus        38 ~v~V~~vLAEGGFa~VYla~~~~~~~~~AlKrm~~~--de~~L~~v~~EI~~MK~L~gh~nIV~yidss~~~~~~~~~~~  115 (738)
T KOG1989|consen   38 RVTVEKVLAEGGFAQVYLAQDVKGGKKYALKRMYVN--DEEALNAVKREIDIMKLLSGHKNIVSYIDSSAINRSSNNGVW  115 (738)
T ss_pred             EEEEEEEEccCCcEEEEEEEecCCCceeeeeeeecC--CHHHHHHHHHHHHHHHHhcCCCceeeEeccccccccCCCcee
Confidence            355688999999999999999988899999998765  455566799999999999977999999993 22   11   2


Q ss_pred             eEEEEEeccCcccHHHHHHhc--CCCCHHHHHHHHHHHHHHHHhhhccC
Q psy8006          79 DMILLLELLTSAVDSKIRESF--GSKSESGVQNCLEPSISVFSSLSKFE  125 (126)
Q Consensus        79 ~~~lv~e~~~~~~L~~~~~~~--~~~~~~~~~~~~~qi~~~l~~l~~~~  125 (126)
                      ..+|+||||.+|.|-+++..+  ..|+|.+++.|+.|+.+|+++||...
T Consensus       116 EvllLmEyC~gg~Lvd~mn~Rlq~~lte~eVLkIf~dv~~AVa~mH~~~  164 (738)
T KOG1989|consen  116 EVLLLMEYCKGGSLVDFMNTRLQTRLTEDEVLKIFYDVCEAVAAMHYLK  164 (738)
T ss_pred             EEEeehhhccCCcHHHHHHHHHhccCChHHHHHHHHHHHHHHHHHhcCC
Confidence            577999999988898888743  35999999999999999999999765

>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase

Probab=99.82  E-value=8.5e-19  Score=111.85  Aligned_cols=118  Identities=19%  Similarity=0.250  Sum_probs=103.9

Q ss_pred             cccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeEEEEEe
Q psy8006           6 NIISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLLE   85 (126)
Q Consensus         6 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~~lv~e   85 (126)
                      +|...+.||+|++|.||++.+..++..+++|.+...... .....+.+|+..++.++| ||++++++.+..++..++++|
T Consensus         2 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~-~~~~~~~~e~~~l~~~~~-~~i~~~~~~~~~~~~~~lv~e   79 (265)
T cd06605           2 DLEYLGELGAGNSGVVSKVLHRPTGKIMAVKTIRLEINE-AIQKQILRELDILHKCNS-PYIVGFYGAFYNNGDISICME   79 (265)
T ss_pred             cchHHHHhcCCCCeEEEEEEEcCCCcEEEEEEEecccCh-HHHHHHHHHHHHHHHCCC-CchhhhheeeecCCEEEEEEE
Confidence            455567899999999999999999999999999875432 334568899999999997 999999999999999999999


Q ss_pred             ccCcccHHHHHHhc-CCCCHHHHHHHHHHHHHHHHhhhc-cC
Q psy8006          86 LLTSAVDSKIRESF-GSKSESGVQNCLEPSISVFSSLSK-FE  125 (126)
Q Consensus        86 ~~~~~~L~~~~~~~-~~~~~~~~~~~~~qi~~~l~~l~~-~~  125 (126)
                      ++++++|.+++... ..+++..+..++.|++.+++|||+ .+
T Consensus        80 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~  121 (265)
T cd06605          80 YMDGGSLDKILKEVQGRIPERILGKIAVAVLKGLTYLHEKHK  121 (265)
T ss_pred             ecCCCcHHHHHHHccCCCCHHHHHHHHHHHHHHHHHHcCCCC
Confidence            99999999998765 679999999999999999999998 65

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity

>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase

Probab=99.82  E-value=1.6e-18  Score=112.10  Aligned_cols=121  Identities=17%  Similarity=0.203  Sum_probs=100.7

Q ss_pred             ccccccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeEEE
Q psy8006           3 NIKNIISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMIL   82 (126)
Q Consensus         3 ~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~~l   82 (126)
                      ...+|...+.||+|+||.||.|.+..++..+++|.+...... .....+.+|+.++..++| +|++++.+.+..+...++
T Consensus         3 ~~~~y~~~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~-~~~~~~~~e~~~l~~l~h-~ni~~~~~~~~~~~~~~l   80 (291)
T cd07870           3 AATSYLNLEKLGEGSYATVYKGISRINGQLVALKVISMKTEE-GVPFTAIREASLLKGLKH-ANIVLLHDIIHTKETLTF   80 (291)
T ss_pred             ccceeEEEEEEEecCCEEEEEEEEcCCCcEEEEEEecccCcC-CCcHHHHHHHHHHHhcCC-CCEeEEEEEEecCCeEEE
Confidence            456788889999999999999999999999999999765432 222356789999999998 999999999998889999


Q ss_pred             EEeccCcccHHHHHH-hcCCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          83 LLELLTSAVDSKIRE-SFGSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        83 v~e~~~~~~L~~~~~-~~~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      ++||+.++ +.+.+. ....+++..+..++.|++.|++|||..++
T Consensus        81 v~e~~~~~-l~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i  124 (291)
T cd07870          81 VFEYMHTD-LAQYMIQHPGGLHPYNVRLFMFQLLRGLAYIHGQHI  124 (291)
T ss_pred             EEecccCC-HHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCc
Confidence            99999755 555544 34567888899999999999999998764

Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess

>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3

Probab=99.82  E-value=1.9e-18  Score=111.20  Aligned_cols=117  Identities=15%  Similarity=0.230  Sum_probs=101.0

Q ss_pred             ccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeEEEEEec
Q psy8006           7 IISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLLEL   86 (126)
Q Consensus         7 ~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~~lv~e~   86 (126)
                      |...+.||+|+||.||++.+..++..+|+|....... ......+.+|+.++..++| ||++++++.+..+...++|+||
T Consensus         6 ~~~~~~ig~G~~~~vy~~~~~~~~~~~aiK~~~~~~~-~~~~~~~~~e~~~l~~l~h-~~iv~~~~~~~~~~~~~lv~e~   83 (277)
T cd06641           6 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEA-EDEIEDIQQEITVLSQCDS-PYVTKYYGSYLKDTKLWIIMEY   83 (277)
T ss_pred             hhhheeEeecCCeEEEEEEECCCCcEEEEEEeccccc-hHHHHHHHHHHHHHHhcCC-CCEeEEEEEEEeCCeEEEEEEe
Confidence            3456789999999999999988899999998865432 2234468899999999998 9999999999999999999999


Q ss_pred             cCcccHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          87 LTSAVDSKIRESFGSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        87 ~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      +++++|.+++.. ..++...+..++.|++.++.+||+.++
T Consensus        84 ~~~~~l~~~i~~-~~~~~~~~~~~~~~l~~~l~~lh~~~i  122 (277)
T cd06641          84 LGGGSALDLLEP-GPLDETQIATILREILKGLDYLHSEKK  122 (277)
T ss_pred             CCCCcHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHccCCe
Confidence            999999888864 568999999999999999999998764

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int

>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=99.81  E-value=5.2e-19  Score=113.76  Aligned_cols=112  Identities=13%  Similarity=0.088  Sum_probs=92.3

Q ss_pred             eccCccceeEEEEEEccC------------------------CcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCc
Q psy8006          12 INDMGKYATVRRCRDRKN------------------------GTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRI   67 (126)
Q Consensus        12 ~lg~g~~~~v~~~~~~~~------------------------~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i   67 (126)
                      .||+|+||.||+|....+                        ...+++|.+....  ......+.+|+.++..++| ||+
T Consensus         2 ~lG~G~~~~vy~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~--~~~~~~~~~~~~~~~~l~h-~ni   78 (274)
T cd05076           2 HLGQGTRTNIYDGRLRVEGGGEPEEDEMEDEDPLVEGNNNGRELRVVLKVLDPSH--RDIALAFFETASLMSQVSH-IHL   78 (274)
T ss_pred             CcCcccccceecceeEeccCCCCcccccccccccccccCCCeeeeEEEEecChHH--HHHHHHHHHHHHHHhcCCC-CCe
Confidence            689999999999874321                        1357888886542  2223457888899999998 999


Q ss_pred             eeeeeeeEeCCeEEEEEeccCcccHHHHHHh-cCCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          68 VQLHQVFESSHDMILLLELLTSAVDSKIRES-FGSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        68 v~l~~~~~~~~~~~lv~e~~~~~~L~~~~~~-~~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      +++++++..+...++||||+++++|..++.. ...+++..+..++.|++.|++|||+.++
T Consensus        79 v~~~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i  138 (274)
T cd05076          79 AFVHGVCVRGSENIMVEEFVEHGPLDVCLRKEKGRVPVAWKITVAQQLASALSYLEDKNL  138 (274)
T ss_pred             eeEEEEEEeCCceEEEEecCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCc
Confidence            9999999999999999999999999888864 4578999999999999999999998764

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt

>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins

Probab=99.81  E-value=6.3e-19  Score=112.18  Aligned_cols=113  Identities=19%  Similarity=0.294  Sum_probs=99.5

Q ss_pred             ccCccceeEEEEEEccCCcEEEEEEeecCCCC-chhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeEEEEEeccCccc
Q psy8006          13 NDMGKYATVRRCRDRKNGTQYAAKFLRKKRRS-TDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLLELLTSAV   91 (126)
Q Consensus        13 lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~-~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~~lv~e~~~~~~   91 (126)
                      ||+|+||.||.+.+..++..+++|.+...... ......+.+|+.++..++| ||++++++.+......|+++|++++++
T Consensus         1 lg~g~~~~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~~~h-~~i~~~~~~~~~~~~~~lv~e~~~~~~   79 (265)
T cd05579           1 ISKGAYGRVFLAKKKSTGDIYAIKVIKKADMIRKNQVDQVLTERDILSQAQS-PYVVKLYYSFQGKKNLYLVMEYLPGGD   79 (265)
T ss_pred             CCCCCceEEEEEEECCCCCEEEEEEecchhhhhhhHHHHHHHHHHHHHhCCC-cchhHHHHheecCcEEEEEEecCCCCc
Confidence            58999999999999999999999999765432 2234468899999999998 999999999998899999999999999


Q ss_pred             HHHHHHhcCCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          92 DSKIRESFGSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        92 L~~~~~~~~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      |.+++.+...+++..+..++.|++.+++|||+.++
T Consensus        80 L~~~l~~~~~~~~~~~~~i~~qi~~~L~~lH~~~i  114 (265)
T cd05579          80 LASLLENVGSLDEDVARIYIAEIVLALEYLHSNGI  114 (265)
T ss_pred             HHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCe
Confidence            99999876789999999999999999999998763

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re

>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3

Probab=99.81  E-value=2.7e-18  Score=110.67  Aligned_cols=114  Identities=23%  Similarity=0.289  Sum_probs=93.0

Q ss_pred             eccCccceeEEEEEEccCCcEEEEEEeecCCCCchh-HHHHHHHHHHHHHh---cCCCCceeeeeeeEeCCeEEEEEecc
Q psy8006          12 INDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDL-KAEILHEVAVLEAC---RCNSRIVQLHQVFESSHDMILLLELL   87 (126)
Q Consensus        12 ~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~-~~~~~~e~~~l~~~---~~~~~iv~l~~~~~~~~~~~lv~e~~   87 (126)
                      +||+|+||.||.+.+..++..+|+|.+......... .....++..++..+   .| |+++.+.+.+...+..++||||+
T Consensus         1 ~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~i~~~~~~~~~~~~~~lv~e~~   79 (279)
T cd05633           1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDC-PFIVCMTYAFHTPDKLCFILDLM   79 (279)
T ss_pred             CcccCCCeEEEEEEECCCCcEEEEEEEEccccccchHHHHHHHHHHHHHHHhhCCC-CcEeEEEEEEecCCeEEEEEecC
Confidence            489999999999999999999999999876443222 12234444433333   44 99999999999888999999999


Q ss_pred             CcccHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          88 TSAVDSKIRESFGSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        88 ~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      ++++|.+++.....+++..+..++.|++.|++|||..++
T Consensus        80 ~~~~L~~~i~~~~~l~~~~~~~i~~qi~~al~~lH~~~i  118 (279)
T cd05633          80 NGGDLHYHLSQHGVFSEKEMRFYATEIILGLEHMHNRFV  118 (279)
T ss_pred             CCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCc
Confidence            999999888877789999999999999999999998764

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi

>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta

Probab=99.81  E-value=9e-19  Score=118.06  Aligned_cols=93  Identities=14%  Similarity=0.180  Sum_probs=76.1

Q ss_pred             ccccceeeccCccceeEEEEEEc-----cCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCe
Q psy8006           5 KNIISSIINDMGKYATVRRCRDR-----KNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHD   79 (126)
Q Consensus         5 ~~~~~~~~lg~g~~~~v~~~~~~-----~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~   79 (126)
                      +++...+.||+|+||.||+|.+.     ..+..+|+|.+..... ....+.+.+|+.++..+..|||++++++.+...+.
T Consensus        37 ~~~~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~-~~~~~~~~~E~~~l~~l~~H~niv~~~~~~~~~~~  115 (401)
T cd05107          37 DNLVLGRTLGSGAFGRVVEATAHGLSHSQSTMKVAVKMLKSTAR-SSEKQALMSELKIMSHLGPHLNIVNLLGACTKGGP  115 (401)
T ss_pred             HHeehhhhccCCCceeEEEEEEcCCCCCCCceEEEEEecCCCCC-hhHHHHHHHHHHHHHhcCCCCCeEEEEEEEccCCC
Confidence            45667789999999999999853     3456899999976532 22234688999999999833999999999998889


Q ss_pred             EEEEEeccCcccHHHHHHh
Q psy8006          80 MILLLELLTSAVDSKIRES   98 (126)
Q Consensus        80 ~~lv~e~~~~~~L~~~~~~   98 (126)
                      .++|+||+++|+|.+++..
T Consensus       116 ~~iv~E~~~~g~L~~~l~~  134 (401)
T cd05107         116 IYIITEYCRYGDLVDYLHR  134 (401)
T ss_pred             cEEEEeccCCCcHHHHHHh
Confidence            9999999999999888753

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D

>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9

Probab=99.81  E-value=1.5e-18  Score=112.87  Aligned_cols=122  Identities=11%  Similarity=0.158  Sum_probs=99.8

Q ss_pred             ccccccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCC----
Q psy8006           3 NIKNIISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSH----   78 (126)
Q Consensus         3 ~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~----   78 (126)
                      -+++|...+.||+|+||.||++.+..++..+|+|.+..............+|+.++++++| |+++++++.+...+    
T Consensus        10 ~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~~e~~~l~~l~h-~~iv~~~~~~~~~~~~~~   88 (310)
T cd07865          10 EVSKYEKLAKIGQGTFGEVFKARHKKTKQIVALKKVLMENEKEGFPITALREIKILQLLKH-ENVVNLIEICRTKATPYN   88 (310)
T ss_pred             hhhheEEEEEeecCCCEEEEEEEECCCCcEEEEEEEeccCCcCCchhHHHHHHHHHHhCCC-CCccceEEEEeccccccc
Confidence            3567888899999999999999999999999999987654333333346789999999998 99999999876543    


Q ss_pred             ----eEEEEEeccCcccHHHHHHhc-CCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          79 ----DMILLLELLTSAVDSKIRESF-GSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        79 ----~~~lv~e~~~~~~L~~~~~~~-~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                          ..+++|||+.++ +.+.+... ..+++..+..++.|++.|++|||+.++
T Consensus        89 ~~~~~~~lv~e~~~~~-l~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~~i  140 (310)
T cd07865          89 RYKGSFYLVFEFCEHD-LAGLLSNKNVKFTLSEIKKVMKMLLNGLYYIHRNKI  140 (310)
T ss_pred             CCCceEEEEEcCCCcC-HHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence                459999999875 76666543 468999999999999999999998763

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl

>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases

Probab=99.81  E-value=2.3e-18  Score=110.61  Aligned_cols=118  Identities=16%  Similarity=0.197  Sum_probs=101.7

Q ss_pred             cccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhc---CCCCceeeeeeeEeCCeEEE
Q psy8006           6 NIISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACR---CNSRIVQLHQVFESSHDMIL   82 (126)
Q Consensus         6 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~---~~~~iv~l~~~~~~~~~~~l   82 (126)
                      .|...+.||+|+||.||+|.+..++..+++|.++.... ......+.+|+.+++.++   | |+++++++.+......++
T Consensus         2 ~y~~~~~l~~g~~g~v~~~~~~~~~~~~~iK~~~~~~~-~~~~~~~~~e~~~l~~l~~~~~-~~vi~~~~~~~~~~~~~l   79 (277)
T cd06917           2 LYQRLELIGRGAYGAVYRGKHVPTGRVVALKIINLDTP-DDDVSDIQREVALLSQLRQSQP-PNITKYYGSYLKGPRLWI   79 (277)
T ss_pred             hhhhhhheeccCCceEEEEEEcCCCcEEEEEEecCCCC-chhHHHHHHHHHHHHHhccCCC-CCeeeEeeeeeeCCEEEE
Confidence            35566789999999999999999999999999876432 223446888999999987   6 999999999998889999


Q ss_pred             EEeccCcccHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          83 LLELLTSAVDSKIRESFGSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        83 v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      +|||+++++|.+++.. ..+++..+..++.|++.++.|||+.++
T Consensus        80 v~e~~~~~~L~~~~~~-~~l~~~~~~~i~~~i~~~l~~lh~~~i  122 (277)
T cd06917          80 IMEYAEGGSVRTLMKA-GPIAEKYISVIIREVLVALKYIHKVGV  122 (277)
T ss_pred             EEecCCCCcHHHHHHc-cCCCHHHHHHHHHHHHHHHHHHHhCCc
Confidence            9999999999988865 478999999999999999999998764

Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent

>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains

Probab=99.81  E-value=1e-18  Score=110.86  Aligned_cols=119  Identities=13%  Similarity=0.151  Sum_probs=104.2

Q ss_pred             ccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeEEEEEec
Q psy8006           7 IISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLLEL   86 (126)
Q Consensus         7 ~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~~lv~e~   86 (126)
                      |...+.+|+|++|.||++.+..++..+++|.+............+.+|+.+++.++| +|++++.+.+......++++|+
T Consensus         2 y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~-~~i~~~~~~~~~~~~~~~v~e~   80 (256)
T cd08530           2 FKVLKKLGKGSYGSVYKVKRLSDNQFYALKEVDLGSMSQKEREDAVNEIRILASVNH-PNIISYKEAFLDGNKLCIVMEY   80 (256)
T ss_pred             ceEeeeecCCCceeEEEEEECCCCCEEEEEEEehhhccHHHHHHHHHHHHHHHhCCC-CCchhhhhhhccCCEEEEEehh
Confidence            556778999999999999999999999999998766554445568899999999998 9999999999988999999999


Q ss_pred             cCcccHHHHHHh----cCCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          87 LTSAVDSKIRES----FGSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        87 ~~~~~L~~~~~~----~~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      +++++|.+++.+    +..+++..+..++.|++.|++|||+.++
T Consensus        81 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lh~~~i  124 (256)
T cd08530          81 APFGDLSKAISKRKKKRKLIPEQEIWRIFIQLLRGLQALHEQKI  124 (256)
T ss_pred             cCCCCHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhCCc
Confidence            999999888765    3568999999999999999999998764

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an

>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4

Probab=99.81  E-value=2.6e-18  Score=110.54  Aligned_cols=118  Identities=14%  Similarity=0.198  Sum_probs=102.5

Q ss_pred             cccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeEEEEEe
Q psy8006           6 NIISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLLE   85 (126)
Q Consensus         6 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~~lv~e   85 (126)
                      .|...+.||+|+||.||.+.+..++..+|+|.+..... ......+.+|+.++..++| |+++++.+.+..+...++|||
T Consensus         5 ~y~~~~~lg~g~~~~vy~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~e~~~l~~l~h-~~i~~~~~~~~~~~~~~lv~e   82 (277)
T cd06640           5 LFTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEA-EDEIEDIQQEITVLSQCDS-PYVTKYYGSYLKGTKLWIIME   82 (277)
T ss_pred             hhhhhhhcccCCCeEEEEEEEccCCEEEEEEEEecccc-HHHHHHHHHHHHHHHhCCC-CCEeeEEEEEEECCEEEEEEe
Confidence            35566789999999999999998899999999875532 2234468899999999998 999999999999999999999


Q ss_pred             ccCcccHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          86 LLTSAVDSKIRESFGSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        86 ~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      |+++++|.+++.. .++++..+..++.|++.+++|||..++
T Consensus        83 ~~~~~~L~~~i~~-~~l~~~~~~~~~~~l~~~l~~lh~~~i  122 (277)
T cd06640          83 YLGGGSALDLLRA-GPFDEFQIATMLKEILKGLDYLHSEKK  122 (277)
T ss_pred             cCCCCcHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCc
Confidence            9999999888865 568999999999999999999998764

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter

>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85

Probab=99.81  E-value=2.6e-18  Score=110.69  Aligned_cols=118  Identities=19%  Similarity=0.262  Sum_probs=100.2

Q ss_pred             cccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeEEEEEe
Q psy8006           6 NIISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLLE   85 (126)
Q Consensus         6 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~~lv~e   85 (126)
                      +|...+.||+|++|.||+|.+..++..+|+|.+...... .....+.+|+.++..++| ||++++++.+...+..++++|
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~-~~~~~~~~E~~~l~~l~h-~~i~~~~~~~~~~~~~~lv~e   78 (284)
T cd07836           1 NFKQLEKLGEGTYATVYKGRNRTTGEIVALKEIHLDAEE-GTPSTAIREISLMKELKH-ENIVRLHDVIHTENKLMLVFE   78 (284)
T ss_pred             CceEeeeeccCCceEEEEEEECCCCeEEEEEEecccccc-cchHHHHHHHHHHHhhcC-CCEeeeeeeEeeCCcEEEEEe
Confidence            466778999999999999999999999999999765432 223357789999999998 999999999999999999999


Q ss_pred             ccCcccHHHHHHhc---CCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          86 LLTSAVDSKIRESF---GSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        86 ~~~~~~L~~~~~~~---~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      |+++ +|.+++...   ..+++..+..++.|++.|++|||..++
T Consensus        79 ~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i  121 (284)
T cd07836          79 YMDK-DLKKYMDTHGVRGALDPNTVKSFTYQLLKGIAFCHENRV  121 (284)
T ss_pred             cCCc-cHHHHHHhcCCCCCcCHHHHHHHHHHHHHHHHHHHHCCe
Confidence            9997 477776543   368999999999999999999998763

Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.

>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases

Probab=99.81  E-value=1.8e-18  Score=109.92  Aligned_cols=117  Identities=17%  Similarity=0.143  Sum_probs=102.4

Q ss_pred             cccccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeEEEE
Q psy8006           4 IKNIISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILL   83 (126)
Q Consensus         4 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~~lv   83 (126)
                      ..+|...+.+|+|++|.||.+...  +..+|+|.+.....   ..+++.+|+.++..++| +|++++++.+......+++
T Consensus         5 ~~~~~~~~~ig~g~~g~v~~~~~~--~~~v~iK~~~~~~~---~~~~~~~e~~~l~~l~~-~~i~~~~~~~~~~~~~~~v   78 (256)
T cd05039           5 SKELKLGATIGKGEFGDVMLGDYR--GQKVAVKCLKDDST---AAQAFLAEASVMTTLRH-PNLVQLLGVVLQGNPLYIV   78 (256)
T ss_pred             hhhccceeeeecCCCceEEEEEec--CcEEEEEEeccchh---HHHHHHHHHHHHHhcCC-cceeeeEEEEcCCCCeEEE
Confidence            456778899999999999999864  78899999976542   34568899999999998 9999999999888899999


Q ss_pred             EeccCcccHHHHHHhcC--CCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          84 LELLTSAVDSKIRESFG--SKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        84 ~e~~~~~~L~~~~~~~~--~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      ||++++++|.++++...  .+++..+..++.|++.|+.|||..++
T Consensus        79 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lh~~~i  123 (256)
T cd05039          79 TEYMAKGSLVDYLRSRGRAVITLAQQLGFALDVCEGMEYLEEKNF  123 (256)
T ss_pred             EEecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCc
Confidence            99999999999987654  68999999999999999999998764

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk

>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase

Probab=99.81  E-value=8.8e-19  Score=111.89  Aligned_cols=117  Identities=19%  Similarity=0.118  Sum_probs=101.7

Q ss_pred             cccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeEEEEEe
Q psy8006           6 NIISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLLE   85 (126)
Q Consensus         6 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~~lv~e   85 (126)
                      .+...+.||+|++|.||++....++..+++|.+.....   ....+.+|+.++..++| |+++++++.+...+..+++||
T Consensus         7 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~K~~~~~~~---~~~~~~~e~~~l~~l~h-~~i~~~~~~~~~~~~~~lv~e   82 (263)
T cd05052           7 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM---EVEEFLKEAAVMKEIKH-PNLVQLLGVCTREPPFYIITE   82 (263)
T ss_pred             HeEEeeecCCcccceEEEEEEecCCceEEEEEecCCch---HHHHHHHHHHHHHhCCC-CChhheEEEEcCCCCcEEEEE
Confidence            46667889999999999999999999999999875422   23468899999999998 999999999998889999999


Q ss_pred             ccCcccHHHHHHhc--CCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          86 LLTSAVDSKIRESF--GSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        86 ~~~~~~L~~~~~~~--~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      |+++++|.+++...  ..+++..+..++.|++.+++|||+.++
T Consensus        83 ~~~~~~L~~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~~i  125 (263)
T cd05052          83 FMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNF  125 (263)
T ss_pred             eCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCE
Confidence            99999999888653  358899999999999999999998763

Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays

>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12

Probab=99.81  E-value=1.2e-18  Score=113.14  Aligned_cols=121  Identities=17%  Similarity=0.228  Sum_probs=100.3

Q ss_pred             cccccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCC-----
Q psy8006           4 IKNIISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSH-----   78 (126)
Q Consensus         4 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~-----   78 (126)
                      ..+|...+.+|+|++|.||++.+..++..+|+|.++...........+.+|+.+++.++| ||++++++.+....     
T Consensus         6 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~e~~~~~~l~h-~~i~~~~~~~~~~~~~~~~   84 (302)
T cd07864           6 VDKFDIIGQIGEGTYGQVYKARDKDTGELVALKKVRLDNEKEGFPITAIREIKILRQLNH-RNIVNLKEIVTDKQDALDF   84 (302)
T ss_pred             hhhhheeeeecccCCEEEEEEEECCCCcEEEEEEEeecccccCchHHHHHHHHHHHhCCC-CCeeeeeheecCcchhhhc
Confidence            456777889999999999999999899999999998654333333457789999999998 99999999886544     


Q ss_pred             -----eEEEEEeccCcccHHHHHHh-cCCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          79 -----DMILLLELLTSAVDSKIRES-FGSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        79 -----~~~lv~e~~~~~~L~~~~~~-~~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                           ..++++||++++ +...+.. ...+++..+..++.|++.|++|||+.++
T Consensus        85 ~~~~~~~~lv~e~~~~~-l~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~i  137 (302)
T cd07864          85 KKDKGAFYLVFEYMDHD-LMGLLESGLVHFSEDHIKSFMKQLLEGLNYCHKKNF  137 (302)
T ss_pred             cccCCcEEEEEcccCcc-HHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCe
Confidence                 789999999885 6555554 3468999999999999999999998764

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely

>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4

Probab=99.81  E-value=1.2e-18  Score=111.74  Aligned_cols=120  Identities=14%  Similarity=0.120  Sum_probs=101.0

Q ss_pred             ccccceeeccCccceeEEEEEEcc-----CCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCe
Q psy8006           5 KNIISSIINDMGKYATVRRCRDRK-----NGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHD   79 (126)
Q Consensus         5 ~~~~~~~~lg~g~~~~v~~~~~~~-----~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~   79 (126)
                      .+|...+.||+|+||.||.+....     ....+++|....... ......+.+|+.++.+++| ||++++++.+...+.
T Consensus         5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~-~~~~~~~~~E~~~l~~l~h-~~iv~~~~~~~~~~~   82 (275)
T cd05046           5 SNLQEITTLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTKD-ENLQSEFRRELDMFRKLSH-KNVVRLLGLCREAEP   82 (275)
T ss_pred             HhceeeeeecccceeEEEEEEeccCCcCCCcceEEEEccCCccc-hHHHHHHHHHHHHHHhcCC-cceeeeEEEECCCCc
Confidence            567788899999999999998653     345788988765421 2234568999999999998 999999999988889


Q ss_pred             EEEEEeccCcccHHHHHHhcC---------CCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          80 MILLLELLTSAVDSKIRESFG---------SKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        80 ~~lv~e~~~~~~L~~~~~~~~---------~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      .+++|||+++++|.+++....         .+++..+..++.|++.|++|||+.++
T Consensus        83 ~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~~i  138 (275)
T cd05046          83 HYMILEYTDLGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQIALGMDHLSNARF  138 (275)
T ss_pred             ceEEEEecCCCcHHHHHHhcccccccccccCCCHHHHHHHHHHHHHHHHHhhhcCc
Confidence            999999999999999987544         68999999999999999999998764

Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s

>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3

Probab=99.81  E-value=1.2e-18  Score=115.63  Aligned_cols=119  Identities=15%  Similarity=0.157  Sum_probs=99.2

Q ss_pred             cccccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeC------
Q psy8006           4 IKNIISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESS------   77 (126)
Q Consensus         4 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~------   77 (126)
                      .++|...+.||+|+||.||.+.+..++..+|+|.+............+.+|+.+++.++| ||++++++.+...      
T Consensus        16 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h-~niv~~~~~~~~~~~~~~~   94 (355)
T cd07874          16 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNH-KNIISLLNVFTPQKSLEEF   94 (355)
T ss_pred             hhceeEEEEeeecCCEEEEEEEecCCCceEEEEEeCCcccChHHHHHHHHHHHHHHHhCC-Cchhceeeeeecccccccc
Confidence            456777889999999999999999999999999997655444445568899999999998 9999999987543      


Q ss_pred             CeEEEEEeccCcccHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          78 HDMILLLELLTSAVDSKIRESFGSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        78 ~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      ...|++|||++++ +.+.+..  .+++..+..++.|++.|++|||+.++
T Consensus        95 ~~~~lv~e~~~~~-l~~~~~~--~l~~~~~~~~~~qi~~aL~~LH~~gi  140 (355)
T cd07874          95 QDVYLVMELMDAN-LCQVIQM--ELDHERMSYLLYQMLCGIKHLHSAGI  140 (355)
T ss_pred             ceeEEEhhhhccc-HHHHHhh--cCCHHHHHHHHHHHHHHHHHHHhCCc
Confidence            2579999999876 6555553  47889999999999999999999764

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok

>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2

Probab=99.81  E-value=3.1e-18  Score=108.97  Aligned_cols=115  Identities=14%  Similarity=0.148  Sum_probs=99.3

Q ss_pred             ccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEe--CCeEEEEE
Q psy8006           7 IISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFES--SHDMILLL   84 (126)
Q Consensus         7 ~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~--~~~~~lv~   84 (126)
                      |...+.||.|++|.||++.+..++..+++|.+............+..|+.+++.++| ||++++++.+..  ....++++
T Consensus         2 y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~-~~i~~~~~~~~~~~~~~~~~~~   80 (265)
T cd08217           2 YEVLETIGKGSFGTVRKVRRKSDGKILVWKEIDYGNMTEKEKQQLVSEVNILRELKH-PNIVRYYDRIIDRSNQTLYIVM   80 (265)
T ss_pred             ceeeeeeccCCCeEEEEeeecCCCCEEEEEEEecccCCHHHHHHHHHHHHHHHhcCC-CccceeeeeeecCCCCEEEEEe
Confidence            455678999999999999999999999999998766555555568899999999999 999999987753  45689999


Q ss_pred             eccCcccHHHHHHh----cCCCCHHHHHHHHHHHHHHHHhhh
Q psy8006          85 ELLTSAVDSKIRES----FGSKSESGVQNCLEPSISVFSSLS  122 (126)
Q Consensus        85 e~~~~~~L~~~~~~----~~~~~~~~~~~~~~qi~~~l~~l~  122 (126)
                      ||+++++|.+++.+    ...+++..+..++.|++.|++|||
T Consensus        81 e~~~~~~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH  122 (265)
T cd08217          81 EYCEGGDLAQLIQKCKKERKYIEEEFIWRILTQLLLALYECH  122 (265)
T ss_pred             hhccCCCHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHh
Confidence            99999999888864    357899999999999999999999

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi

>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4

Probab=99.81  E-value=2.9e-18  Score=108.93  Aligned_cols=119  Identities=16%  Similarity=0.149  Sum_probs=101.2

Q ss_pred             ccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEe-CCeEEEEEe
Q psy8006           7 IISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFES-SHDMILLLE   85 (126)
Q Consensus         7 ~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~-~~~~~lv~e   85 (126)
                      |...+.+|+|++|.||.+.+..++..+++|.+............+.+|+.+++.++| |+++++.+.+.. ....++++|
T Consensus         2 y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~-~~i~~~~~~~~~~~~~~~lv~e   80 (257)
T cd08223           2 YCFVRVVGKGSYGEVSLVRHRTDGKQYVIKKLNLRNASRRERKAAEQEAQLLSQLKH-PNIVAYRESWEGEDGLLYIVMG   80 (257)
T ss_pred             ceEEEEecCCCCeEEEEEEEcCCCcEEEEEEEehhhcCHHHHHHHHHHHHHHHhCCC-CCeeeeeeeecCCCCEEEEEec
Confidence            566789999999999999999889999999997655444444568889999999998 999999988764 446899999


Q ss_pred             ccCcccHHHHHHh--cCCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          86 LLTSAVDSKIRES--FGSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        86 ~~~~~~L~~~~~~--~~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      ++++++|.+++..  ...+++.++..++.|++.++++||+.++
T Consensus        81 ~~~~~~l~~~l~~~~~~~l~~~~~~~~~~~l~~~l~~lH~~~i  123 (257)
T cd08223          81 FCEGGDLYHKLKEQKGKLLPENQVVEWFVQIAMALQYLHEKHI  123 (257)
T ss_pred             ccCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCe
Confidence            9999999888865  2458999999999999999999998763

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.

>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B

Probab=99.81  E-value=1.6e-18  Score=112.06  Aligned_cols=120  Identities=15%  Similarity=0.161  Sum_probs=100.9

Q ss_pred             cccccceeeccCccceeEEEEEEc-----cCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCC
Q psy8006           4 IKNIISSIINDMGKYATVRRCRDR-----KNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSH   78 (126)
Q Consensus         4 ~~~~~~~~~lg~g~~~~v~~~~~~-----~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~   78 (126)
                      -++|...+.+|+|+||.||.+...     .++..+|+|.+....  ......+.+|+.++.+++| |+++++++.+...+
T Consensus         4 ~~~~~~~~~lg~G~~~~v~~~~~~~~~~~~~~~~~~ik~~~~~~--~~~~~~~~~e~~~l~~l~h-~~i~~~~~~~~~~~   80 (288)
T cd05093           4 RHNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDAS--DNARKDFHREAELLTNLQH-EHIVKFYGVCVEGD   80 (288)
T ss_pred             hHHeeeccccCCcCCeeEEeeEeccCCCCCcceEEEEEecCCcC--HHHHHHHHHHHHHHHhCCC-CCcceEEEEEecCC
Confidence            467888999999999999999752     345568999886542  2334468899999999998 99999999999889


Q ss_pred             eEEEEEeccCcccHHHHHHhcC-------------CCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          79 DMILLLELLTSAVDSKIRESFG-------------SKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        79 ~~~lv~e~~~~~~L~~~~~~~~-------------~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      ..++++||+++++|.+++....             .+++..+..++.|++.|++|||+.++
T Consensus        81 ~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~lH~~~i  141 (288)
T cd05093          81 PLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIAAGMVYLASQHF  141 (288)
T ss_pred             ccEEEEEcCCCCCHHHHHHHcCCccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCe
Confidence            9999999999999998886432             48999999999999999999998763

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly

>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases

Probab=99.81  E-value=3.3e-18  Score=109.49  Aligned_cols=122  Identities=16%  Similarity=0.184  Sum_probs=102.9

Q ss_pred             cccccccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCC---
Q psy8006           2 NNIKNIISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSH---   78 (126)
Q Consensus         2 ~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~---   78 (126)
                      +..++|...+.||+|++|.||.+.+..++..+++|.+.....   ....+.+|+.++.++..|+|++++++.+....   
T Consensus         3 ~~~~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~---~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~   79 (275)
T cd06608           3 DPTGIFELVEVIGEGTYGKVYKARHKKTGQLVAIKIMDIIED---EEEEIKEEYNILRKYSNHPNIATFYGAFIKKNPPG   79 (275)
T ss_pred             CchhheeheeeecCCCCeEEEEEEECCCCcEEEEEEEecCch---hHHHHHHHHHHHHHhcCCCChheEEEEEEecCCCC
Confidence            356778889999999999999999988899999999876532   23468899999999953499999999986544   


Q ss_pred             ---eEEEEEeccCcccHHHHHHh----cCCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          79 ---DMILLLELLTSAVDSKIRES----FGSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        79 ---~~~lv~e~~~~~~L~~~~~~----~~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                         ..+++|||+++++|.+++..    +..+++..+..++.|++.|++|||+.++
T Consensus        80 ~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~~~i  134 (275)
T cd06608          80 NDDQLWLVMELCGGGSVTDLVKGLRKKGKRLKEEWIAYILRETLRGLAYLHENKV  134 (275)
T ss_pred             cceEEEEEEEcCCCCcHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhcCCc
Confidence               48999999999999887754    3478999999999999999999998764

Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I

>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase

Probab=99.81  E-value=2.5e-18  Score=110.82  Aligned_cols=117  Identities=15%  Similarity=0.241  Sum_probs=100.6

Q ss_pred             ccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeEEEEEec
Q psy8006           7 IISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLLEL   86 (126)
Q Consensus         7 ~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~~lv~e~   86 (126)
                      |...+.||+|+||.||++.+..++..+++|.+....  ......+.+|+.+++.++| ||++++++.+...+..++++||
T Consensus         7 ~~i~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~--~~~~~~~~~e~~~l~~l~h-~~ii~~~~~~~~~~~~~~v~e~   83 (282)
T cd06643           7 WEIIGELGDGAFGKVYKAQNKETGVLAAAKVIDTKS--EEELEDYMVEIDILASCDH-PNIVKLLDAFYYENNLWILIEF   83 (282)
T ss_pred             HHHHhhcccCCCeEEEEEEECCCCeEEEEEEeCCCC--HHHHHHHHHHHHHHHHCCC-CCeeeEEEEEeeCCEEEEEEEe
Confidence            445677999999999999999999999999986542  2234468889999999998 9999999999999999999999


Q ss_pred             cCcccHHHHHHh-cCCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          87 LTSAVDSKIRES-FGSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        87 ~~~~~L~~~~~~-~~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      +++++|..++.. ...+++..+..++.|++.|++|||+.++
T Consensus        84 ~~~~~l~~~~~~~~~~l~~~~~~~~~~qi~~~L~~LH~~~i  124 (282)
T cd06643          84 CAGGAVDAVMLELERPLTEPQIRVVCKQTLEALNYLHENKI  124 (282)
T ss_pred             cCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence            999999777654 4578999999999999999999998764

Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.

>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases

Probab=99.81  E-value=4.7e-18  Score=109.85  Aligned_cols=119  Identities=21%  Similarity=0.284  Sum_probs=100.1

Q ss_pred             cccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEe--CCeEEEE
Q psy8006           6 NIISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFES--SHDMILL   83 (126)
Q Consensus         6 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~--~~~~~lv   83 (126)
                      +|...+.||.|++|.||.+.+..++..+|+|.+..... ......+.+|++++..++| |||+++++.+..  .+..+++
T Consensus         2 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~-~~~~~~~~~e~~~l~~l~h-~~iv~~~~~~~~~~~~~~~lv   79 (287)
T cd06621           2 KIVELSRLGEGAGGSVTKCRLKNTGMIFALKTITTDPN-PDLQKQILRELEINKSCKS-PYIVKYYGAFLDESSSSIGIA   79 (287)
T ss_pred             ceEEEEEeccCCceEEEEEEECCCCeEEEEEEEecCCc-hHHHHHHHHHHHHHHhCCC-CCeeeeeeEEEccCCCeEEEE
Confidence            56678899999999999999998999999999876533 2334568999999999998 999999998754  3478999


Q ss_pred             EeccCcccHHHHHHh----cCCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          84 LELLTSAVDSKIRES----FGSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        84 ~e~~~~~~L~~~~~~----~~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      |||+++++|.+++..    ...+++..+..++.|++.++.|||..++
T Consensus        80 ~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~i  126 (287)
T cd06621          80 MEYCEGGSLDSIYKKVKKRGGRIGEKVLGKIAESVLKGLSYLHSRKI  126 (287)
T ss_pred             EEecCCCCHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCc
Confidence            999999999877643    3468999999999999999999998763

Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2

Probab=99.81  E-value=2.1e-18  Score=110.29  Aligned_cols=120  Identities=17%  Similarity=0.201  Sum_probs=102.0

Q ss_pred             ccccceeeccCccceeEEEEEEccCCc---EEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeEE
Q psy8006           5 KNIISSIINDMGKYATVRRCRDRKNGT---QYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMI   81 (126)
Q Consensus         5 ~~~~~~~~lg~g~~~~v~~~~~~~~~~---~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~~   81 (126)
                      ++|...+.||+|++|.||++....++.   .+++|.+..... ....+.+..|+.++..++| ||++++.+.+...+..+
T Consensus         5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~ik~~~~~~~-~~~~~~~~~e~~~l~~l~h-~~i~~~~~~~~~~~~~~   82 (268)
T cd05063           5 SHITKQKVIGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGYT-EKQRQDFLSEASIMGQFSH-HNIIRLEGVVTKFKPAM   82 (268)
T ss_pred             HHceEeeEecCCCCccEEEEEEecCCCCceEEEEEeccccCC-HHHHHHHHHHHHHHhcCCC-CCeeEEEEEEccCCCcE
Confidence            467788999999999999999865554   689998865432 2234568899999999998 99999999999889999


Q ss_pred             EEEeccCcccHHHHHHhc-CCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          82 LLLELLTSAVDSKIRESF-GSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        82 lv~e~~~~~~L~~~~~~~-~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      ++|||+++++|.+++... ..+++..+..++.|++.|++|||+.++
T Consensus        83 lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i  128 (268)
T cd05063          83 IITEYMENGALDKYLRDHDGEFSSYQLVGMLRGIAAGMKYLSDMNY  128 (268)
T ss_pred             EEEEcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence            999999999998888653 578999999999999999999998763

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored

>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors

Probab=99.81  E-value=2e-18  Score=112.50  Aligned_cols=120  Identities=10%  Similarity=0.066  Sum_probs=99.7

Q ss_pred             ccccceeeccCccceeEEEEEE-----ccCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHh-cCCCCceeeeeeeEeCC
Q psy8006           5 KNIISSIINDMGKYATVRRCRD-----RKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEAC-RCNSRIVQLHQVFESSH   78 (126)
Q Consensus         5 ~~~~~~~~lg~g~~~~v~~~~~-----~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~-~~~~~iv~l~~~~~~~~   78 (126)
                      ++|...+.||+|+||.||++..     ..++..+|+|.+..... ......+.+|+.++.++ +| ||++++++.+...+
T Consensus        35 ~~~~~~~~ig~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~~h-~~iv~~~~~~~~~~  112 (302)
T cd05055          35 NNLSFGKTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTAH-SSEREALMSELKIMSHLGNH-ENIVNLLGACTIGG  112 (302)
T ss_pred             HHeEEcceeeccCCeeEEEEEEecCCCCCceeEEEEEecCccCC-hHHHHHHHHHHHHHHhccCC-CCcceEEEEEecCC
Confidence            4567788999999999999975     23455799998875432 22344688999999999 56 99999999999889


Q ss_pred             eEEEEEeccCcccHHHHHHhcC--CCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          79 DMILLLELLTSAVDSKIRESFG--SKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        79 ~~~lv~e~~~~~~L~~~~~~~~--~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      ..+++|||+.+++|.+++....  .+++.++..++.|++.+++|||+.++
T Consensus       113 ~~~lv~e~~~~~~L~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~i  162 (302)
T cd05055         113 PILVITEYCCYGDLLNFLRRKRESFLTLEDLLSFSYQVAKGMAFLASKNC  162 (302)
T ss_pred             ceEEEEEcCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence            9999999999999998887533  38999999999999999999998763

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept

>KOG0690|consensus

Probab=99.81  E-value=2.4e-20  Score=120.02  Aligned_cols=123  Identities=20%  Similarity=0.232  Sum_probs=108.3

Q ss_pred             ccccccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCC-chhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeEE
Q psy8006           3 NIKNIISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRS-TDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMI   81 (126)
Q Consensus         3 ~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~-~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~~   81 (126)
                      ++++|---++||+|.||+|..|+.+.+++.+|+|++++...- .......+-|-.+++...| |.+..+...|...++++
T Consensus       166 Tm~dFdfLKvLGkGTFGKVIL~rEKat~k~YAiKIlkKeviiakdEVAHTlTE~RVL~~~~H-PFLt~LKYsFQt~drlC  244 (516)
T KOG0690|consen  166 TMEDFDFLKVLGKGTFGKVILCREKATGKLYAIKILKKEVIIAKDEVAHTLTENRVLQNCRH-PFLTSLKYSFQTQDRLC  244 (516)
T ss_pred             ccchhhHHHHhcCCccceEEEEeecccCceeehhhhhhhheeehHHhhhhhhHHHHHHhccC-cHHHHhhhhhccCceEE
Confidence            355666678999999999999999999999999999987653 3333457788899999999 99999999999999999


Q ss_pred             EEEeccCcccHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          82 LLLELLTSAVDSKIRESFGSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        82 lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      .||||+.||.|...+.+...|++..++.+-..|++|+.|||...+
T Consensus       245 FVMeyanGGeLf~HLsrer~FsE~RtRFYGaEIvsAL~YLHs~~i  289 (516)
T KOG0690|consen  245 FVMEYANGGELFFHLSRERVFSEDRTRFYGAEIVSALGYLHSRNI  289 (516)
T ss_pred             EEEEEccCceEeeehhhhhcccchhhhhhhHHHHHHhhhhhhCCe
Confidence            999999999998888887889999999999999999999998653

>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases

Probab=99.81  E-value=2e-18  Score=109.83  Aligned_cols=117  Identities=14%  Similarity=0.126  Sum_probs=99.3

Q ss_pred             ccccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeEEEEE
Q psy8006           5 KNIISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLL   84 (126)
Q Consensus         5 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~~lv~   84 (126)
                      .++...+.||+|++|.||++.+. .+..+|+|.+......   ...+.+|+.++..++| ||++++++.+...+..+++|
T Consensus         4 ~~~~~~~~lg~G~~~~v~~~~~~-~~~~~~iK~~~~~~~~---~~~~~~e~~~l~~l~~-~~i~~~~~~~~~~~~~~lv~   78 (256)
T cd05059           4 SELTFLKELGSGQFGVVHLGKWR-GKIDVAIKMIREGAMS---EDDFIEEAKVMMKLSH-PNLVQLYGVCTKQRPIFIVT   78 (256)
T ss_pred             HHcchhhhhccCCCceEEEeEec-CCccEEEEEeccCCCC---HHHHHHHHHHHHhCCC-CCEEEEEEEEcCCCceEEEE
Confidence            34566788999999999999875 4567999998754432   2357889999999998 99999999998888999999


Q ss_pred             eccCcccHHHHHHh-cCCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          85 ELLTSAVDSKIRES-FGSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        85 e~~~~~~L~~~~~~-~~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      |++++++|.+++.. ...+++..+..++.|++.+++|||+.++
T Consensus        79 e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i  121 (256)
T cd05059          79 EYMANGCLLNYLRERKGKLGTEWLLDMCSDVCEAMEYLESNGF  121 (256)
T ss_pred             ecCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCc
Confidence            99999999988865 3468999999999999999999998764

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows

>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=99.80  E-value=3.3e-18  Score=110.28  Aligned_cols=118  Identities=15%  Similarity=0.170  Sum_probs=98.0

Q ss_pred             cccceeeccCccceeEEEEE----EccCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEe--CCe
Q psy8006           6 NIISSIINDMGKYATVRRCR----DRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFES--SHD   79 (126)
Q Consensus         6 ~~~~~~~lg~g~~~~v~~~~----~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~--~~~   79 (126)
                      ++...+.||+|+||.||.+.    +..++..+++|.+....  ......+.+|+.++..++| ||++++.+.+..  ...
T Consensus         5 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~v~iK~~~~~~--~~~~~~~~~e~~~l~~l~h-~~iv~~~~~~~~~~~~~   81 (284)
T cd05081           5 HLKFIQQLGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHST--AEHLRDFEREIEILKSLQH-DNIVKYKGVCYSAGRRN   81 (284)
T ss_pred             cceeeeeccCCCCceEEEEEecCCcCCCCcEEEEEEeccCC--HHHHHHHHHHHHHHHhCCC-CCeeEEEEEEccCCCCc
Confidence            46667899999999999987    34568899999986543  2334468899999999998 999999987653  346


Q ss_pred             EEEEEeccCcccHHHHHHhc-CCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          80 MILLLELLTSAVDSKIRESF-GSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        80 ~~lv~e~~~~~~L~~~~~~~-~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      .++++||+++++|.+++... ..+++..+..++.|++.|++|||+.++
T Consensus        82 ~~lv~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~l~~aL~~LH~~~i  129 (284)
T cd05081          82 LRLVMEYLPYGSLRDYLQKHRERLDHRKLLLYASQICKGMEYLGSKRY  129 (284)
T ss_pred             eEEEEEecCCCCHHHHHHhcCcCCCHHHHHHHHHHHHHHHHHHHHCCc
Confidence            89999999999999988653 468999999999999999999998764

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th

>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase

Probab=99.80  E-value=4.2e-18  Score=109.93  Aligned_cols=118  Identities=15%  Similarity=0.214  Sum_probs=104.5

Q ss_pred             ccccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeEEEEE
Q psy8006           5 KNIISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLL   84 (126)
Q Consensus         5 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~~lv~   84 (126)
                      .+|...+.+|+|++|.||.+.+..++..+++|.+.....   ....+.+|+..+..++| +|++++++.+...+..|+++
T Consensus        19 ~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~---~~~~~~~e~~~l~~l~~-~~i~~~~~~~~~~~~~~lv~   94 (286)
T cd06614          19 ELYKNLEKIGEGASGEVYKATDRATGKEVAIKKMRLRKQ---NKELIINEILIMKDCKH-PNIVDYYDSYLVGDELWVVM   94 (286)
T ss_pred             ccchHhHhccCCCCeEEEEEEEccCCcEEEEEEEecCch---hHHHHHHHHHHHHHCCC-CCeeEEEEEEEECCEEEEEE
Confidence            456667889999999999999998899999999976543   23468899999999998 99999999999999999999


Q ss_pred             eccCcccHHHHHHhcC-CCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          85 ELLTSAVDSKIRESFG-SKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        85 e~~~~~~L~~~~~~~~-~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      ||+++++|.+++.... .++...+..++.|++.+++|||+.++
T Consensus        95 e~~~~~~L~~~l~~~~~~l~~~~~~~i~~~i~~~L~~lH~~gi  137 (286)
T cd06614          95 EYMDGGSLTDIITQNFVRMNEPQIAYVCREVLQGLEYLHSQNV  137 (286)
T ss_pred             eccCCCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhCCe
Confidence            9999999999998765 79999999999999999999998764

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou

>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2

Probab=99.80  E-value=4.5e-18  Score=110.51  Aligned_cols=118  Identities=16%  Similarity=0.216  Sum_probs=103.6

Q ss_pred             ccccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeEEEEE
Q psy8006           5 KNIISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLL   84 (126)
Q Consensus         5 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~~lv~   84 (126)
                      .+|...+.||.|++|.||++.+..++..+++|.+......  ....+.+|+.+++.++| ||++++++.+...+..++++
T Consensus        19 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~--~~~~~~~e~~~l~~l~h-~~iv~~~~~~~~~~~~~lv~   95 (296)
T cd06655          19 KKYTRYEKIGQGASGTVFTAIDVATGQEVAIKQINLQKQP--KKELIINEILVMKELKN-PNIVNFLDSFLVGDELFVVM   95 (296)
T ss_pred             ceEEEEEEEecCCCeEEEEEEEcCCCcEEEEEEEecccCc--hHHHHHHHHHHHHhcCC-CceeeeeeeEecCceEEEEE
Confidence            4577788999999999999999999999999999764322  23468889999999998 99999999999999999999


Q ss_pred             eccCcccHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          85 ELLTSAVDSKIRESFGSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        85 e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      ||+++++|..++.. ..+++.++..++.|++.+++|||+.++
T Consensus        96 e~~~~~~L~~~~~~-~~l~~~~~~~i~~~l~~al~~LH~~~i  136 (296)
T cd06655          96 EYLAGGSLTDVVTE-TCMDEAQIAAVCRECLQALEFLHANQV  136 (296)
T ss_pred             EecCCCcHHHHHHh-cCCCHHHHHHHHHHHHHHHHHHHHCCc
Confidence            99999999888865 468999999999999999999998764

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase

Probab=99.80  E-value=3e-18  Score=111.18  Aligned_cols=119  Identities=15%  Similarity=0.182  Sum_probs=102.3

Q ss_pred             cccccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeEEEE
Q psy8006           4 IKNIISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILL   83 (126)
Q Consensus         4 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~~lv   83 (126)
                      ..+|...+.||+|+||.||++.+..++..+++|.+.....  .....+.+|+.+++.++| ||++++++.+..++..|+|
T Consensus        18 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~--~~~~~~~~e~~~l~~l~h-p~i~~~~~~~~~~~~~~lv   94 (293)
T cd06647          18 KKKYTRFEKIGQGASGTVYTAIDVATGQEVAIKQMNLQQQ--PKKELIINEILVMRENKH-PNIVNYLDSYLVGDELWVV   94 (293)
T ss_pred             hhhceeeeEecCCCCeEEEEEEEcCCCCEEEEEEeccccc--hHHHHHHHHHHHHhhcCC-CCeeehhheeeeCCcEEEE
Confidence            3456677889999999999999988899999999865432  223458889999999998 9999999999999999999


Q ss_pred             EeccCcccHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          84 LELLTSAVDSKIRESFGSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        84 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      +||+++++|.+++.+ ..+++..+..++.|++.|++|||+.++
T Consensus        95 ~e~~~~~~L~~~~~~-~~l~~~~~~~i~~~l~~al~~LH~~gi  136 (293)
T cd06647          95 MEYLAGGSLTDVVTE-TCMDEGQIAAVCRECLQALEFLHSNQV  136 (293)
T ss_pred             EecCCCCcHHHHHhh-cCCCHHHHHHHHHHHHHHHHHHHhCCE
Confidence            999999999988875 457899999999999999999998763

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi

>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1

Probab=99.80  E-value=2.7e-18  Score=114.37  Aligned_cols=119  Identities=14%  Similarity=0.147  Sum_probs=99.1

Q ss_pred             cccccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeC------
Q psy8006           4 IKNIISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESS------   77 (126)
Q Consensus         4 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~------   77 (126)
                      ..+|...+.||+|+||.||.+.+..++..+|+|.+............+.+|+.+++.++| ||++++++.+...      
T Consensus        23 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h-~~ii~~~~~~~~~~~~~~~  101 (364)
T cd07875          23 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNH-KNIIGLLNVFTPQKSLEEF  101 (364)
T ss_pred             hcceeEEEEeecCCCeEEEEEEECCCCcEEEEEEeCccccCchhHHHHHHHHHHHHhcCC-CCccccceeeccccccccc
Confidence            356777889999999999999999999999999998654444445568899999999998 9999999887543      


Q ss_pred             CeEEEEEeccCcccHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          78 HDMILLLELLTSAVDSKIRESFGSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        78 ~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      ...|+||||++++ +.+.+..  .+++..+..++.|++.|++|||+.++
T Consensus       102 ~~~~lv~e~~~~~-l~~~~~~--~~~~~~~~~~~~qi~~aL~~LH~~~i  147 (364)
T cd07875         102 QDVYIVMELMDAN-LCQVIQM--ELDHERMSYLLYQMLCGIKHLHSAGI  147 (364)
T ss_pred             CeEEEEEeCCCCC-HHHHHHh--cCCHHHHHHHHHHHHHHHHHHhhCCe
Confidence            3579999999876 6666653  47889999999999999999998764

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome

Probab=99.80  E-value=2e-18  Score=109.93  Aligned_cols=117  Identities=15%  Similarity=0.136  Sum_probs=98.8

Q ss_pred             ccccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeEEEEE
Q psy8006           5 KNIISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLL   84 (126)
Q Consensus         5 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~~lv~   84 (126)
                      ..|...+.||+|++|.||.+.... +..+|+|.+......   ...+.+|+.++..++| ||++++++.+......+++|
T Consensus         4 ~~~~~~~~lg~G~~~~vy~~~~~~-~~~~aik~~~~~~~~---~~~~~~e~~~l~~l~h-~~i~~~~~~~~~~~~~~lv~   78 (256)
T cd05113           4 KDLTFLKELGTGQFGVVKYGKWRG-QYDVAIKMIKEGSMS---EDEFIEEAKVMMKLSH-EKLVQLYGVCTKQRPIYIVT   78 (256)
T ss_pred             HHeEEeeEecCcccceEEEEEecC-CCcEEEEEcCCCccc---HHHHHHHHHHHhcCCC-CCeeeEEEEEccCCCcEEEE
Confidence            456667889999999999997643 446999988755432   2358899999999998 99999999998888899999


Q ss_pred             eccCcccHHHHHHhc-CCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          85 ELLTSAVDSKIRESF-GSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        85 e~~~~~~L~~~~~~~-~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      ||+.+++|.+++... ..+++..+..++.|++.|++|||+.++
T Consensus        79 e~~~~~~l~~~i~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i  121 (256)
T cd05113          79 EYMSNGCLLNYLREHGKRFQPSQLLEMCKDVCEGMAYLESKQF  121 (256)
T ss_pred             EcCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCe
Confidence            999999999888753 468999999999999999999998763

Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds

>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases

Probab=99.80  E-value=1.4e-18  Score=112.08  Aligned_cols=116  Identities=16%  Similarity=0.152  Sum_probs=100.9

Q ss_pred             cccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeEEEEEe
Q psy8006           6 NIISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLLE   85 (126)
Q Consensus         6 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~~lv~e   85 (126)
                      +|...+.||+|+||.||++.+..++..+|+|.+.... .......+.+|+.++..++| ||++++++.+..++..++++|
T Consensus         2 ~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~-~~~~~~~~~~e~~~l~~~~~-~~i~~~~~~~~~~~~~~lv~e   79 (286)
T cd06622           2 EIEVLDELGKGNYGSVYKVLHRPTGVTMAMKEIRLEL-DESKFNQIIMELDILHKAVS-PYIVDFYGAFFIEGAVYMCME   79 (286)
T ss_pred             hhhhhhhhcccCCeEEEEEEEcCCCcEEEEEEeeccc-CHHHHHHHHHHHHHHHhcCC-CcHHhhhhheecCCeEEEEEe
Confidence            4556678999999999999999899999999987543 23334568899999999998 999999999999999999999


Q ss_pred             ccCcccHHHHHHhc---CCCCHHHHHHHHHHHHHHHHhhhc
Q psy8006          86 LLTSAVDSKIRESF---GSKSESGVQNCLEPSISVFSSLSK  123 (126)
Q Consensus        86 ~~~~~~L~~~~~~~---~~~~~~~~~~~~~qi~~~l~~l~~  123 (126)
                      |+++++|.+++...   ..+++..+..++.|++.|+.|||.
T Consensus        80 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~  120 (286)
T cd06622          80 YMDAGSLDKLYAGGVATEGIPEDVLRRITYAVVKGLKFLKE  120 (286)
T ss_pred             ecCCCCHHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHh
Confidence            99999998888753   368999999999999999999995

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5

Probab=99.80  E-value=9.9e-19  Score=115.27  Aligned_cols=120  Identities=16%  Similarity=0.197  Sum_probs=101.4

Q ss_pred             ccccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEe----CCeE
Q psy8006           5 KNIISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFES----SHDM   80 (126)
Q Consensus         5 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~----~~~~   80 (126)
                      ++|...+.||+|++|.||++.+..++..+|+|.+............+.+|+.++..++| ||++++++.+..    ....
T Consensus         5 ~~y~~~~~lg~g~~g~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h-~~iv~~~~~~~~~~~~~~~~   83 (334)
T cd07855           5 SRYKPIENIGSGAYGVVCSAIDTRSGKKVAIKKIPHAFDVPTLAKRTLRELKILRHFKH-DNIIAIRDILRPPGADFKDV   83 (334)
T ss_pred             hceeeeeeeecCCCeEEEEEEEcCCCCEEEEEEeccccccccchHHHHHHHHHHHhcCC-CCccCHHHhccccCCCCceE
Confidence            46777889999999999999999999999999997654333334567889999999998 999999987753    3468


Q ss_pred             EEEEeccCcccHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          81 ILLLELLTSAVDSKIRESFGSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        81 ~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      ++++||+.+ +|.+++.....+++..+..++.|++.|++|||+.++
T Consensus        84 ~lv~e~~~~-~l~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~i  128 (334)
T cd07855          84 YVVMDLMES-DLHHIIHSDQPLTEEHIRYFLYQLLRGLKYIHSANV  128 (334)
T ss_pred             EEEEehhhh-hHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence            999999975 588888776779999999999999999999998764

Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the

>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases

Probab=99.80  E-value=3.1e-18  Score=109.01  Aligned_cols=113  Identities=18%  Similarity=0.127  Sum_probs=96.0

Q ss_pred             eeccCccceeEEEEEEccCC---cEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeEEEEEecc
Q psy8006          11 IINDMGKYATVRRCRDRKNG---TQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLLELL   87 (126)
Q Consensus        11 ~~lg~g~~~~v~~~~~~~~~---~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~~lv~e~~   87 (126)
                      +.||+|+||.||+|.....+   ..+|+|.+...... .....+.+|+.++..++| ||++++++.+. .+..+++|||+
T Consensus         1 ~~ig~G~~g~v~~~~~~~~~~~~~~~~iK~~~~~~~~-~~~~~~~~e~~~l~~l~h-~~iv~~~~~~~-~~~~~~v~e~~   77 (257)
T cd05060           1 KELGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIA-AGKKEFLREASVMAQLDH-PCIVRLIGVCK-GEPLMLVMELA   77 (257)
T ss_pred             CccCccCceeEEEeEeeccCCCcceEEEEecccccch-HHHHHHHHHHHHHHhcCC-CCeeeEEEEEc-CCceEEEEEeC
Confidence            46899999999999865544   78999999866543 334468899999999998 99999998765 45689999999


Q ss_pred             CcccHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          88 TSAVDSKIRESFGSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        88 ~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      ++++|.+++.....+++..+..++.|++.+++|||..++
T Consensus        78 ~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lh~~~i  116 (257)
T cd05060          78 PLGPLLKYLKKRREIPVSDLKELAHQVAMGMAYLESKHF  116 (257)
T ss_pred             CCCcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHhhcCe
Confidence            999999999877789999999999999999999998763

Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi

>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors

Probab=99.80  E-value=3.1e-18  Score=110.95  Aligned_cols=120  Identities=17%  Similarity=0.154  Sum_probs=101.3

Q ss_pred             ccccceeeccCccceeEEEEEEccCC----------------cEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCce
Q psy8006           5 KNIISSIINDMGKYATVRRCRDRKNG----------------TQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIV   68 (126)
Q Consensus         5 ~~~~~~~~lg~g~~~~v~~~~~~~~~----------------~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv   68 (126)
                      ..|...+.||+|+||.||.+.+...+                ..+|+|.+..... ......+.+|+.++.+++| ||++
T Consensus         5 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~va~K~~~~~~~-~~~~~~~~~e~~~l~~l~~-~~i~   82 (296)
T cd05051           5 QPLNFVEKLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDAS-DNAREDFLKEVKILSRLSD-PNIA   82 (296)
T ss_pred             hhCcccccccCCCCccEEEEEeccCCcccccccccccccCCceeEEEEEecCccC-HHHHHHHHHHHHHHHhcCC-CCEe
Confidence            46777889999999999998875433                4579998876543 2334568899999999998 9999


Q ss_pred             eeeeeeEeCCeEEEEEeccCcccHHHHHHhcC-----------CCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          69 QLHQVFESSHDMILLLELLTSAVDSKIRESFG-----------SKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        69 ~l~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~-----------~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      ++++.+..++..++++|++++++|.+++....           .+++..+..++.|++.|++|||+.++
T Consensus        83 ~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~LH~~~i  151 (296)
T cd05051          83 RLLGVCTVDPPLCMIMEYMENGDLNQFLQKHVAETSGLACNSKSLSFSTLLYMATQIASGMRYLESLNF  151 (296)
T ss_pred             EEEEEEecCCCcEEEEecCCCCCHHHHHHhcccccccccccCCCCCHHHHHHHHHHHHHHHHHHHHcCc
Confidence            99999998889999999999999998887644           68999999999999999999998764

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke

>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2

Probab=99.80  E-value=1.3e-18  Score=115.10  Aligned_cols=121  Identities=11%  Similarity=0.048  Sum_probs=97.2

Q ss_pred             ccccceeeccCccceeEEEEEE-----ccCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeC-C
Q psy8006           5 KNIISSIINDMGKYATVRRCRD-----RKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESS-H   78 (126)
Q Consensus         5 ~~~~~~~~lg~g~~~~v~~~~~-----~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~-~   78 (126)
                      ++|...+.||+|+||.||+|.+     ..+++.+|+|.++.... ......+.+|+.++..+.+|||++++++.+... .
T Consensus         7 ~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~   85 (343)
T cd05103           7 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGAT-HSEHRALMSELKILIHIGHHLNVVNLLGACTKPGG   85 (343)
T ss_pred             hHhcccccccCCccceEEEEeeccCCccccceeEEEEEeccCCC-hHHHHHHHHHHHHHHhccCCccHhhhcceeecCCC
Confidence            4677889999999999999984     35677899999976432 222446889999999996669999999887644 4


Q ss_pred             eEEEEEeccCcccHHHHHHhc-----------------------------------------------------------
Q psy8006          79 DMILLLELLTSAVDSKIRESF-----------------------------------------------------------   99 (126)
Q Consensus        79 ~~~lv~e~~~~~~L~~~~~~~-----------------------------------------------------------   99 (126)
                      ..+++|||+++++|.+++..+                                                           
T Consensus        86 ~~~lv~ey~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  165 (343)
T cd05103          86 PLMVIVEFCKFGNLSNYLRSKRGEFVPYKTKDARFRQGKSGYGDISEDLKRRLDSITSSQSSASSGFVEEKSLSDVEEEE  165 (343)
T ss_pred             ceEEEEeccCCCcHHHHHHhcCCccccccccccccccccccccchhhhhhhhccccccccccccccccCCCccccchhhh
Confidence            688999999999998887542                                                           


Q ss_pred             --------CCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006         100 --------GSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus       100 --------~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                              ..++...+..++.|++.|++|||+.++
T Consensus       166 ~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i  200 (343)
T cd05103         166 AEQEDLYKKVLTLEDLICYSFQVAKGMEFLASRKC  200 (343)
T ss_pred             hhhhhhhhccCCHHHHHHHHHHHHHHHHHHHhCCe
Confidence                    135677888999999999999998764

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp

>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase

Probab=99.80  E-value=9.3e-19  Score=115.73  Aligned_cols=119  Identities=17%  Similarity=0.170  Sum_probs=98.1

Q ss_pred             ccccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeC------C
Q psy8006           5 KNIISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESS------H   78 (126)
Q Consensus         5 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~------~   78 (126)
                      ++|...+.||+|+||.||++.+..++..+|+|.+............+.+|+.+++.++| |||+++++++...      .
T Consensus        15 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h-~~iv~~~~~~~~~~~~~~~~   93 (343)
T cd07878          15 ERYQNLTPVGSGAYGSVCSAYDTRLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHMKH-ENVIGLLDVFTPATSIENFN   93 (343)
T ss_pred             hhhhhheecccCCCeEEEEEEECCCCCEEEEEEeCchhhhhHHHHHHHHHHHHHHhcCC-CchhhhhhhhcccccccccC
Confidence            45777889999999999999999999999999997654333334457789999999998 9999999887533      3


Q ss_pred             eEEEEEeccCcccHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          79 DMILLLELLTSAVDSKIRESFGSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        79 ~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      ..|++++++ +++|.++++. ..+++..+..++.|++.|+.|||+.++
T Consensus        94 ~~~~~~~~~-~~~l~~~~~~-~~l~~~~~~~i~~qi~~aL~~LH~~~i  139 (343)
T cd07878          94 EVYLVTNLM-GADLNNIVKC-QKLSDEHVQFLIYQLLRGLKYIHSAGI  139 (343)
T ss_pred             cEEEEeecC-CCCHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence            478999988 4558777764 569999999999999999999998764

Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is

>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase

Probab=99.80  E-value=4.7e-18  Score=109.49  Aligned_cols=113  Identities=22%  Similarity=0.277  Sum_probs=92.1

Q ss_pred             eccCccceeEEEEEEccCCcEEEEEEeecCCCCchhHH-HHHHHHHH---HHHhcCCCCceeeeeeeEeCCeEEEEEecc
Q psy8006          12 INDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKA-EILHEVAV---LEACRCNSRIVQLHQVFESSHDMILLLELL   87 (126)
Q Consensus        12 ~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~-~~~~e~~~---l~~~~~~~~iv~l~~~~~~~~~~~lv~e~~   87 (126)
                      +||+|+||.||.+.+..+++.+|+|.+........... ....|..+   +....| |+++.+.+.+...+..++||||+
T Consensus         1 ~ig~g~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~i~~~~~~~~~~~~~~~v~e~~   79 (278)
T cd05606           1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDC-PFIVCMSYAFHTPDKLSFILDLM   79 (278)
T ss_pred             CcccCCCeEEEEEEEecCCCEEEEEEeeccccccchhHHHHHHHHHHHHHHHhCCC-CcEeeeeeeeecCCEEEEEEecC
Confidence            47999999999999999999999999987644322111 23334333   333445 99999999999999999999999


Q ss_pred             CcccHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhhccC
Q psy8006          88 TSAVDSKIRESFGSKSESGVQNCLEPSISVFSSLSKFE  125 (126)
Q Consensus        88 ~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~l~~~~  125 (126)
                      .+++|.+++.....+++..+..++.|++.|++|||+.+
T Consensus        80 ~g~~L~~~l~~~~~l~~~~~~~~~~ql~~~l~~lH~~~  117 (278)
T cd05606          80 NGGDLHYHLSQHGVFSEAEMRFYAAEIILGLEHMHNRF  117 (278)
T ss_pred             CCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            99999888877778999999999999999999999875

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co

>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants

Probab=99.80  E-value=1.9e-18  Score=114.11  Aligned_cols=120  Identities=13%  Similarity=0.165  Sum_probs=100.9

Q ss_pred             ccccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeC-----Ce
Q psy8006           5 KNIISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESS-----HD   79 (126)
Q Consensus         5 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~-----~~   79 (126)
                      +.|...+.||+|+||.||.+.+..++..+|+|.+..............+|+.++..++| +|++++.+.+...     ..
T Consensus         5 ~~y~~~~~lg~G~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h-~ni~~~~~~~~~~~~~~~~~   83 (337)
T cd07858           5 TKYVPIKPIGRGAYGIVCSAKNSETNEKVAIKKIANAFDNRIDAKRTLREIKLLRHLDH-ENVIAIKDIMPPPHREAFND   83 (337)
T ss_pred             cceeEEEEeccCCCeEEEEEEecCCCCeEEEEEecccccccchhHHHHHHHHHHHhcCC-CCccchHHheecccccccCc
Confidence            35677889999999999999999999999999987654333334457789999999998 9999999887543     35


Q ss_pred             EEEEEeccCcccHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          80 MILLLELLTSAVDSKIRESFGSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        80 ~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      .|+++||+.+ +|.+++.....+++..+..++.|++.|++|||+.++
T Consensus        84 ~~lv~e~~~~-~L~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~i  129 (337)
T cd07858          84 VYIVYELMDT-DLHQIIRSSQTLSDDHCQYFLYQLLRGLKYIHSANV  129 (337)
T ss_pred             EEEEEeCCCC-CHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCE
Confidence            8999999975 588888877789999999999999999999998763

Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati

>KOG0658|consensus

Probab=99.80  E-value=1.6e-19  Score=116.69  Aligned_cols=113  Identities=15%  Similarity=0.135  Sum_probs=94.7

Q ss_pred             cccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCC-----eE
Q psy8006           6 NIISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSH-----DM   80 (126)
Q Consensus         6 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~-----~~   80 (126)
                      .|...+++|.|+||.||.|....++..+|||........      --+|+.+|+.++| ||||++.-+|....     +.
T Consensus        25 ~~~~~~liG~GsFg~Vyq~~~~e~~~~vAIKKv~~d~r~------knrEl~im~~l~H-pNIV~L~~~f~~~~~~d~~~l   97 (364)
T KOG0658|consen   25 SYEAVRLIGSGSFGVVYQAKLRETEEEVAIKKVLQDKRY------KNRELQIMRKLDH-PNIVRLLYFFSSSTESDEVYL   97 (364)
T ss_pred             EEEeeEEEeecccceEEEEEEcCCCceeEEEEecCCCCc------CcHHHHHHHhcCC-cCeeeEEEEEEecCCCchhHH
Confidence            356688999999999999999999999999998876432      2379999999999 99999987775322     34


Q ss_pred             EEEEeccCcccHHHHHHh----cCCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          81 ILLLELLTSAVDSKIRES----FGSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        81 ~lv~e~~~~~~L~~~~~~----~~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      .+||||++.. |.+.++.    +..++.-.++-+.+|+.+|++|||..++
T Consensus        98 nlVleymP~t-L~~~~r~~~~~~~~mp~~~iKLYt~Qlfrgl~yLh~~~I  146 (364)
T KOG0658|consen   98 NLVLEYMPET-LYRVIRHYTRANQRMPLLEIKLYTYQLFRGLAYLHSHGI  146 (364)
T ss_pred             HHHHHhchHH-HHHHHHHHhhcCCCCceeeeHHHHHHHHHHHHHHHhcCc
Confidence            5899999988 8777763    5678999999999999999999999775

>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4

Probab=99.80  E-value=3.8e-18  Score=110.16  Aligned_cols=118  Identities=19%  Similarity=0.204  Sum_probs=94.5

Q ss_pred             ccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHh---cCCCCceeeeeeeEe-----CC
Q psy8006           7 IISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEAC---RCNSRIVQLHQVFES-----SH   78 (126)
Q Consensus         7 ~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~---~~~~~iv~l~~~~~~-----~~   78 (126)
                      |...+.||+|+||.||+|.+..++..+|+|.+..............+|+.++..+   +| ||++++++.+..     ..
T Consensus         2 y~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h-~ni~~~~~~~~~~~~~~~~   80 (288)
T cd07863           2 YEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVQTNEDGLPLSTVREVALLKRLEAFDH-PNIVRLMDVCATSRTDRET   80 (288)
T ss_pred             ceEeeEEeecCCeEEEEEEECCCCcEEEEEEeccCcCCCCCchHHHHHHHHHHHhhhcCC-CCeeeeeeeeccccCCCCc
Confidence            5567889999999999999999999999999986543333333466777777766   46 999999998753     24


Q ss_pred             eEEEEEeccCcccHHHHHHhc--CCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          79 DMILLLELLTSAVDSKIRESF--GSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        79 ~~~lv~e~~~~~~L~~~~~~~--~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      ..++++|++++ +|.+++...  ..+++..+..++.|++.|++|||+.++
T Consensus        81 ~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i  129 (288)
T cd07863          81 KVTLVFEHVDQ-DLRTYLDKVPPPGLPAETIKDLMRQFLRGLDFLHANCI  129 (288)
T ss_pred             eEEEEEccccc-CHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCe
Confidence            58999999986 477777643  358999999999999999999998764

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou

>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase

Probab=99.80  E-value=2.9e-18  Score=110.30  Aligned_cols=120  Identities=18%  Similarity=0.093  Sum_probs=101.4

Q ss_pred             cccccceeeccCccceeEEEEEEcc-----CCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCC
Q psy8006           4 IKNIISSIINDMGKYATVRRCRDRK-----NGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSH   78 (126)
Q Consensus         4 ~~~~~~~~~lg~g~~~~v~~~~~~~-----~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~   78 (126)
                      .++|...+.||+|++|.||++.+..     ++..+++|.+..... ......+.+|+.++..++| +|++++++.+...+
T Consensus         5 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~v~ik~~~~~~~-~~~~~~~~~e~~~l~~l~~-~~i~~~~~~~~~~~   82 (277)
T cd05036           5 RDSITLLRALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESCS-EQDESDFLMEALIMSKFNH-QNIVRLIGVSFERL   82 (277)
T ss_pred             HHHcEeeeECCCCCCCcEEEEEEecCCCCCCceeEEEEEcCCCCC-HHHHHHHHHHHHHHHhCCC-CCEeeEEEEEccCC
Confidence            3567788899999999999999876     677899998864432 2223358899999999998 99999999998888


Q ss_pred             eEEEEEeccCcccHHHHHHhcC-------CCCHHHHHHHHHHHHHHHHhhhccC
Q psy8006          79 DMILLLELLTSAVDSKIRESFG-------SKSESGVQNCLEPSISVFSSLSKFE  125 (126)
Q Consensus        79 ~~~lv~e~~~~~~L~~~~~~~~-------~~~~~~~~~~~~qi~~~l~~l~~~~  125 (126)
                      ..+++|||+++++|.+++....       .+++..+..++.|++.+++|||+.+
T Consensus        83 ~~~lv~e~~~g~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~  136 (277)
T cd05036          83 PRFILLELMAGGDLKSFLRENRPRPERPSSLTMKDLLFCARDVAKGCKYLEENH  136 (277)
T ss_pred             CcEEEEecCCCCCHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            8999999999999999886532       4888999999999999999999876

Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well

>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2

Probab=99.80  E-value=3.1e-18  Score=108.68  Aligned_cols=117  Identities=17%  Similarity=0.226  Sum_probs=103.7

Q ss_pred             ccccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeEEEEE
Q psy8006           5 KNIISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLL   84 (126)
Q Consensus         5 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~~lv~   84 (126)
                      ++|...+.+|+|++|.||++....++..+++|.+.....    ...+.+|+..++.++| ||++++.+.+......|+++
T Consensus         3 ~~y~~~~~i~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~----~~~~~~e~~~~~~l~~-~~i~~~~~~~~~~~~~~l~~   77 (256)
T cd06612           3 EVFDILEKLGEGSYGSVYKAIHKETGQVVAIKVVPVEED----LQEIIKEISILKQCDS-PYIVKYYGSYFKNTDLWIVM   77 (256)
T ss_pred             ccchhhhhhcCCCCeEEEEEEEcCCCcEEEEEEeecHHH----HHHHHHHHHHHHhCCC-CcEeeeeeeeecCCcEEEEE
Confidence            567778899999999999999998889999999875421    4568999999999988 99999999999999999999


Q ss_pred             eccCcccHHHHHHh-cCCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          85 ELLTSAVDSKIRES-FGSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        85 e~~~~~~L~~~~~~-~~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      |++++++|.+++.. ...+++..+..++.|++.++.|||..++
T Consensus        78 e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~l~~~l~~lh~~~i  120 (256)
T cd06612          78 EYCGAGSVSDIMKITNKTLTEEEIAAILYQTLKGLEYLHSNKK  120 (256)
T ss_pred             ecCCCCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHCCc
Confidence            99999999988865 4578999999999999999999998763

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a

>KOG0667|consensus

Probab=99.80  E-value=1.5e-18  Score=118.86  Aligned_cols=116  Identities=17%  Similarity=0.222  Sum_probs=101.5

Q ss_pred             ccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhc-C----CCCceeeeeeeEeCCeEE
Q psy8006           7 IISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACR-C----NSRIVQLHQVFESSHDMI   81 (126)
Q Consensus         7 ~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~-~----~~~iv~l~~~~~~~~~~~   81 (126)
                      |...++||+|+||.|.+|.+..++..||||+++...   ....+-..|+.+|..++ +    .-|+|+++++|...++++
T Consensus       188 Y~V~e~LGkGtFGQVvk~~d~~T~e~VAIKIiKN~k---~f~~Q~~~Ei~iL~~ln~~d~~~~~n~Vrm~d~F~fr~Hlc  264 (586)
T KOG0667|consen  188 YEVLEVLGKGSFGQVVKAYDHKTGEIVAIKIIKNKK---RFLRQAQIEIRILELLNKHDPDDKYNIVRMLDYFYFRNHLC  264 (586)
T ss_pred             EEEEEEecccccceeEEEEecCCCcEEEEEeeccCh---HHHHHHHHHHHHHHHHhccCCCCCeeEEEeeecccccccee
Confidence            566889999999999999999999999999998653   23445778999999887 2    249999999999999999


Q ss_pred             EEEeccCcccHHHHHHhc--CCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          82 LLLELLTSAVDSKIRESF--GSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        82 lv~e~~~~~~L~~~~~~~--~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      ||+|++... |+++++.+  ..++...++.+..|++.+|.+||+.++
T Consensus       265 iVfELL~~N-LYellK~n~f~Glsl~~ir~~~~Qil~~L~~L~~l~I  310 (586)
T KOG0667|consen  265 IVFELLSTN-LYELLKNNKFRGLSLPLVRKFAQQILTALLFLHELGI  310 (586)
T ss_pred             eeehhhhhh-HHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCe
Confidence            999999888 99999864  369999999999999999999999875

>PHA02988 hypothetical protein; Provisional

Probab=99.80  E-value=3.6e-18  Score=110.43  Aligned_cols=111  Identities=11%  Similarity=0.067  Sum_probs=95.7

Q ss_pred             eeccCccceeEEEEEEccCCcEEEEEEeecCCCCchh-HHHHHHHHHHHHHhcCCCCceeeeeeeEe----CCeEEEEEe
Q psy8006          11 IINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDL-KAEILHEVAVLEACRCNSRIVQLHQVFES----SHDMILLLE   85 (126)
Q Consensus        11 ~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~-~~~~~~e~~~l~~~~~~~~iv~l~~~~~~----~~~~~lv~e   85 (126)
                      ..+++|+++.||+|..  +|..+|+|.+......... ...+.+|+.++.+++| |||+++++.+..    ....+++||
T Consensus        26 ~~i~~g~~~~v~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h-~nIv~~~g~~~~~~~~~~~~~lv~E  102 (283)
T PHA02988         26 VLIKENDQNSIYKGIF--NNKEVIIRTFKKFHKGHKVLIDITENEIKNLRRIDS-NNILKIYGFIIDIVDDLPRLSLILE  102 (283)
T ss_pred             eEEeeCCceEEEEEEE--CCEEEEEEeccccccccHHHHHHHHHHHHHHHhcCC-CCEEEEeeeEEecccCCCceEEEEE
Confidence            6789999999999987  5889999999865443322 3457899999999999 999999998866    347899999


Q ss_pred             ccCcccHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhhcc
Q psy8006          86 LLTSAVDSKIRESFGSKSESGVQNCLEPSISVFSSLSKF  124 (126)
Q Consensus        86 ~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~l~~~  124 (126)
                      |+++|+|.+++.....++......++.|++.++.|||+.
T Consensus       103 y~~~g~L~~~l~~~~~~~~~~~~~i~~~i~~~l~~lH~~  141 (283)
T PHA02988        103 YCTRGYLREVLDKEKDLSFKTKLDMAIDCCKGLYNLYKY  141 (283)
T ss_pred             eCCCCcHHHHHhhCCCCChhHHHHHHHHHHHHHHHHHhc
Confidence            999999999998777899999999999999999999974

>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors

Probab=99.80  E-value=3e-18  Score=110.37  Aligned_cols=121  Identities=16%  Similarity=0.089  Sum_probs=100.9

Q ss_pred             cccccceeeccCccceeEEEEEEccCC-----cEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCC
Q psy8006           4 IKNIISSIINDMGKYATVRRCRDRKNG-----TQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSH   78 (126)
Q Consensus         4 ~~~~~~~~~lg~g~~~~v~~~~~~~~~-----~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~   78 (126)
                      ..+|...+.||+|+||.||.+.....+     ..+++|.+..... ......+.+|+.++..++| ||++++++.+....
T Consensus         4 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~v~~K~~~~~~~-~~~~~~~~~ei~~l~~l~h-~~i~~~~~~~~~~~   81 (283)
T cd05048           4 LSAVRFLEELGEGAFGKVYKGELTGPNERLSATSVAIKTLKENAE-PKVQQEFRQEAELMSDLQH-PNIVCLLGVCTKEQ   81 (283)
T ss_pred             hHHcchhhcccCccCCcEEEEEEecCCCCcceeeEEEEecccCCC-HHHHHHHHHHHHHHHhcCC-cccceEEEEEcCCC
Confidence            345677789999999999999875544     5789998875432 2334468999999999998 99999999999888


Q ss_pred             eEEEEEeccCcccHHHHHHhc----------------CCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          79 DMILLLELLTSAVDSKIRESF----------------GSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        79 ~~~lv~e~~~~~~L~~~~~~~----------------~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      ..+++|||+++++|.+++...                ..+++..+..++.|++.|++|||+.++
T Consensus        82 ~~~~~~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~al~~lH~~~i  145 (283)
T cd05048          82 PTCMLFEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHIAIQIAAGMEYLSSHHF  145 (283)
T ss_pred             ceEEEEecCCCCcHHHHHHhcCCCcccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhCCe
Confidence            999999999999999888653                357888999999999999999998763

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer

>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1

Probab=99.80  E-value=4.5e-18  Score=110.94  Aligned_cols=120  Identities=11%  Similarity=0.116  Sum_probs=99.3

Q ss_pred             ccccceeeccCccceeEEEEEEcc-------CCcEEEEEEeecCCCCchhHHHHHHHHHHHHHh-cCCCCceeeeeeeEe
Q psy8006           5 KNIISSIINDMGKYATVRRCRDRK-------NGTQYAAKFLRKKRRSTDLKAEILHEVAVLEAC-RCNSRIVQLHQVFES   76 (126)
Q Consensus         5 ~~~~~~~~lg~g~~~~v~~~~~~~-------~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~-~~~~~iv~l~~~~~~   76 (126)
                      +.|...+.||+|+||.||.+.+..       ++..+|+|.+..... ......+.+|+.++..+ +| ||++++++.+..
T Consensus        18 ~~~~i~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~~aiK~~~~~~~-~~~~~~~~~e~~~l~~l~~h-~~i~~~~~~~~~   95 (307)
T cd05098          18 DRLVLGKPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDAT-EKDLSDLISEMEMMKMIGKH-KNIINLLGACTQ   95 (307)
T ss_pred             HHeEEeeeeccCCCeeEEEeEEeccCCcccCccceEEEEeccCCCC-hHHHHHHHHHHHHHHHhcCC-CCEeeEEEEEec
Confidence            567788999999999999997643       234699999976432 23344688899999999 56 999999999998


Q ss_pred             CCeEEEEEeccCcccHHHHHHhc----------------CCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          77 SHDMILLLELLTSAVDSKIRESF----------------GSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        77 ~~~~~lv~e~~~~~~L~~~~~~~----------------~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      .+..|++|||+++++|.+++...                ..++..+++.++.|++.|++|||+.++
T Consensus        96 ~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~gi  161 (307)
T cd05098          96 DGPLYVIVEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKDLVSCAYQVARGMEYLASKKC  161 (307)
T ss_pred             CCceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHCCc
Confidence            99999999999999999888653                247888999999999999999998764

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin

Probab=99.80  E-value=4.2e-18  Score=109.86  Aligned_cols=120  Identities=19%  Similarity=0.214  Sum_probs=98.3

Q ss_pred             cccccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeE-----eCC
Q psy8006           4 IKNIISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFE-----SSH   78 (126)
Q Consensus         4 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~-----~~~   78 (126)
                      .++|...+.||+|+||.||++.+..++..+++|.......   ....+.+|+.++..+..|||++++++.+.     .++
T Consensus        17 ~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~---~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~   93 (286)
T cd06638          17 SDTWEIIETIGKGTYGKVFKVLNKKNGSKAAVKILDPIHD---IDEEIEAEYNILKALSDHPNVVKFYGMYYKKDVKNGD   93 (286)
T ss_pred             ccceeeeeeeccCCCcEEEEEEECCCCceeEEEeeccccc---hHHHHHHHHHHHHHHhcCCCeeeeeeeeeecccCCCC
Confidence            4567778899999999999999999999999998765321   22357789999999953399999999874     345


Q ss_pred             eEEEEEeccCcccHHHHHHh----cCCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          79 DMILLLELLTSAVDSKIRES----FGSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        79 ~~~lv~e~~~~~~L~~~~~~----~~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      ..+++|||+++++|.+++..    ...+++..+..++.|++.|+.|||+.++
T Consensus        94 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i  145 (286)
T cd06638          94 QLWLVLELCNGGSVTDLVKGFLKRGERMEEPIIAYILHEALMGLQHLHVNKT  145 (286)
T ss_pred             eEEEEEeecCCCCHHHHHHHhhccCccccHHHHHHHHHHHHHHHHHHHhCCc
Confidence            78999999999999887642    3468899999999999999999998764

Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear

>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases

Probab=99.80  E-value=3.6e-18  Score=109.34  Aligned_cols=118  Identities=12%  Similarity=0.050  Sum_probs=96.0

Q ss_pred             cceeeccCccceeEEEEEEcc---CCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCe-----
Q psy8006           8 ISSIINDMGKYATVRRCRDRK---NGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHD-----   79 (126)
Q Consensus         8 ~~~~~lg~g~~~~v~~~~~~~---~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~-----   79 (126)
                      ...+.||+|+||.||.|....   ++..+|+|.+............+.+|+..+..++| ||++++++.+.....     
T Consensus         2 ~~~~~lg~G~~g~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h-~~iv~~~~~~~~~~~~~~~~   80 (273)
T cd05035           2 KLGKILGEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDIHTYSEIEEFLSEAACMKDFDH-PNVMKLIGVCFEASSLQKIP   80 (273)
T ss_pred             ccccccCcCCCceEEEEEEecCCCCcceEEEEEeccCcCCHHHHHHHHHHHHHHHhCCC-CCeeeEEeeeccCCccccCc
Confidence            346789999999999998754   34789999998654444444568999999999998 999999998765443     


Q ss_pred             -EEEEEeccCcccHHHHHHhc------CCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          80 -MILLLELLTSAVDSKIRESF------GSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        80 -~~lv~e~~~~~~L~~~~~~~------~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                       .++++||+++++|..++...      ..+++..+..++.|++.|++|||+.++
T Consensus        81 ~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~aL~~lH~~~i  134 (273)
T cd05035          81 KPMVILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALGMEYLSNRNF  134 (273)
T ss_pred             ccEEEEeccCCCCHHHHHHHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhCCe
Confidence             79999999999998777431      368999999999999999999998763

Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu

>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1

Probab=99.80  E-value=1.2e-18  Score=112.02  Aligned_cols=117  Identities=15%  Similarity=0.216  Sum_probs=101.1

Q ss_pred             ccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeEEEEEec
Q psy8006           7 IISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLLEL   86 (126)
Q Consensus         7 ~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~~lv~e~   86 (126)
                      |...+.||+|+||.||++.+..++..+|+|.+..... ......+.+|+.++..++| ||++++.+.+..+...++|+||
T Consensus         6 y~~~~~l~~g~~~~vy~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~e~~~l~~l~h-~~i~~~~~~~~~~~~~~lv~e~   83 (277)
T cd06642           6 FTKLERIGKGSFGEVYKGIDNRTKEVVAIKIIDLEEA-EDEIEDIQQEITVLSQCDS-PYITRYYGSYLKGTKLWIIMEY   83 (277)
T ss_pred             HHHHHHhcCCCCeeEEEEEEcCCCeEEEEEEeccccc-hHHHHHHHHHHHHHHcCCC-CccHhhhcccccCCceEEEEEc
Confidence            4456779999999999999988899999999875533 2234468899999999998 9999999999999999999999


Q ss_pred             cCcccHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          87 LTSAVDSKIRESFGSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        87 ~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      +++++|.+++.. ..+++..+..++.|++.|+.|||..++
T Consensus        84 ~~~~~L~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~i  122 (277)
T cd06642          84 LGGGSALDLLKP-GPLEETYIATILREILKGLDYLHSERK  122 (277)
T ss_pred             cCCCcHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHhcCCe
Confidence            999999888764 568999999999999999999998763

Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25

>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases

Probab=99.80  E-value=3.6e-18  Score=110.00  Aligned_cols=117  Identities=19%  Similarity=0.219  Sum_probs=100.2

Q ss_pred             cceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeEEEEEecc
Q psy8006           8 ISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLLELL   87 (126)
Q Consensus         8 ~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~~lv~e~~   87 (126)
                      ...+.||.|++|.||++.+..++..+++|.+............+.+|+..+..++| |+++++++.+..++..++++||+
T Consensus         2 ~~~~~l~~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~~-~~iv~~~~~~~~~~~~~iv~e~~   80 (283)
T cd07835           2 QKVEKIGEGTYGVVYKARDKLTGEIVALKKIRLETEDEGVPSTAIREISLLKELNH-PNIVRLLDVVHSENKLYLVFEFL   80 (283)
T ss_pred             chheEecCCCCeEEEEEEEcCCCCEEEEEEeecccccccchhHHHHHHHHHHhcCC-CCccCHhheeccCCeEEEEEecc
Confidence            34568999999999999999999999999998654433334467889999999998 99999999999999999999999


Q ss_pred             CcccHHHHHHhcC--CCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          88 TSAVDSKIRESFG--SKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        88 ~~~~L~~~~~~~~--~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      ++ +|.+++....  .+++..+..++.|++.|++|||+.++
T Consensus        81 ~~-~l~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~lH~~~~  120 (283)
T cd07835          81 DL-DLKKYMDSSPLTGLDPPLIKSYLYQLLQGIAYCHSHRV  120 (283)
T ss_pred             Cc-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence            65 5888887644  68999999999999999999998763

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc

>PTZ00024 cyclin-dependent protein kinase; Provisional

Probab=99.80  E-value=3.8e-18  Score=112.46  Aligned_cols=116  Identities=20%  Similarity=0.231  Sum_probs=99.4

Q ss_pred             ceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCch------------hHHHHHHHHHHHHHhcCCCCceeeeeeeEe
Q psy8006           9 SSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTD------------LKAEILHEVAVLEACRCNSRIVQLHQVFES   76 (126)
Q Consensus         9 ~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~------------~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~   76 (126)
                      ..+.||+|+||.||++.+..++..+|+|.+........            ....+.+|+.++..++| ||++++++.+..
T Consensus        13 ~~~~ig~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h-~~iv~~~~~~~~   91 (335)
T PTZ00024         13 KGAHLGEGTYGKVEKAYDTLTGKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELKIMNEIKH-ENIMGLVDVYVE   91 (335)
T ss_pred             hhhcccCCCceeEEEEEECCCCCeEEEEEeeccccccccccchhhhcccccchhHHHHHHHHHhCCC-cceeeeeEEEec
Confidence            46789999999999999999999999999876533221            01146789999999998 999999999999


Q ss_pred             CCeEEEEEeccCcccHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          77 SHDMILLLELLTSAVDSKIRESFGSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        77 ~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      .+..+++||++++ +|.+++.....+++..+..++.|++.|++|||+.++
T Consensus        92 ~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~~~ql~~aL~~LH~~~i  140 (335)
T PTZ00024         92 GDFINLVMDIMAS-DLKKVVDRKIRLTESQVKCILLQILNGLNVLHKWYF  140 (335)
T ss_pred             CCcEEEEEecccc-CHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCe
Confidence            9999999999985 588888877789999999999999999999998764

>KOG1152|consensus

Probab=99.80  E-value=2.2e-19  Score=122.23  Aligned_cols=124  Identities=15%  Similarity=0.117  Sum_probs=107.1

Q ss_pred             cccccccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCc------hhHHHHHHHHHHHHHhc---CCCCceeeee
Q psy8006           2 NNIKNIISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRST------DLKAEILHEVAVLEACR---CNSRIVQLHQ   72 (126)
Q Consensus         2 ~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~------~~~~~~~~e~~~l~~~~---~~~~iv~l~~   72 (126)
                      .++.+|..-+++|+|+||.|+.|.+++....|++|.|.++..-.      ........|+.+|..++   | +||+++.+
T Consensus       558 ~k~s~yttlq~lG~GAyGkV~lai~K~n~~eVViK~I~KeRIL~DtWvrDrkLGtVp~EIqIla~l~~~sH-~NIlKlLd  636 (772)
T KOG1152|consen  558 KKFSDYTTLQPLGEGAYGKVNLAIHKENNYEVVIKMIFKERILVDTWVRDRKLGTVPSEIQILATLNKHSH-ENILKLLD  636 (772)
T ss_pred             cccccceeeeeccccccceEEEeeecccceEEEeeehhhhhhhhhhhhcccccCccchhHHHHHHhhhcCc-cchhhhhh
Confidence            46778899999999999999999999999999999998875421      11224678999999987   5 99999999


Q ss_pred             eeEeCCeEEEEEecc-CcccHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          73 VFESSHDMILLLELL-TSAVDSKIRESFGSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        73 ~~~~~~~~~lv~e~~-~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      .|+++++.||++|-= ++-+|.+++..+..++|.++..+++|++.++++||+++|
T Consensus       637 fFEddd~yyl~te~hg~gIDLFd~IE~kp~m~E~eAk~IFkQV~agi~hlh~~~i  691 (772)
T KOG1152|consen  637 FFEDDDYYYLETEVHGEGIDLFDFIEFKPRMDEPEAKLIFKQVVAGIKHLHDQGI  691 (772)
T ss_pred             eeecCCeeEEEecCCCCCcchhhhhhccCccchHHHHHHHHHHHhccccccccCc
Confidence            999999999999953 334689999988899999999999999999999999986

>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1

Probab=99.80  E-value=4.3e-18  Score=109.74  Aligned_cols=121  Identities=12%  Similarity=0.033  Sum_probs=99.4

Q ss_pred             cccccceeeccCccceeEEEEEE----ccCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCe
Q psy8006           4 IKNIISSIINDMGKYATVRRCRD----RKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHD   79 (126)
Q Consensus         4 ~~~~~~~~~lg~g~~~~v~~~~~----~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~   79 (126)
                      ++++...+.||+|+||.||+|..    ...+..+++|.+..... ......+.+|+.+++.++| ||++++.+.+.....
T Consensus         4 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~ik~~~~~~~-~~~~~~~~~E~~~l~~l~h-~niv~~~~~~~~~~~   81 (283)
T cd05090           4 LSAVRFMEELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDINN-PQQWGEFQQEASLMAELHH-PNIVCLLGVVTQEQP   81 (283)
T ss_pred             hhhceeeeeccccCCcceEEEEEecCCCCCcceEEEEeccCCCC-HHHHHHHHHHHHHHhhCCC-CCeeeEEEEEecCCc
Confidence            34566678999999999999985    34557899999875432 2233468899999999998 999999999998889


Q ss_pred             EEEEEeccCcccHHHHHHhc-----------------CCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          80 MILLLELLTSAVDSKIRESF-----------------GSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        80 ~~lv~e~~~~~~L~~~~~~~-----------------~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      .|++|||+++++|.+++..+                 ..+++..+..++.|++.|++|||+.++
T Consensus        82 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i  145 (283)
T cd05090          82 VCMLFEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLHIAIQIAAGMEYLSSHFF  145 (283)
T ss_pred             eEEEEEcCCCCcHHHHHHhcCCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHhcCe
Confidence            99999999999998887522                 247888899999999999999998763

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases

Probab=99.80  E-value=2e-18  Score=109.75  Aligned_cols=111  Identities=12%  Similarity=0.063  Sum_probs=93.3

Q ss_pred             eeccCccceeEEEEEEccCC----------cEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeE
Q psy8006          11 IINDMGKYATVRRCRDRKNG----------TQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDM   80 (126)
Q Consensus        11 ~~lg~g~~~~v~~~~~~~~~----------~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~   80 (126)
                      +.||+|+||.||++.+..++          ..+++|.+......   ...+.+|+.+++.++| ||++++++.+.. ...
T Consensus         1 ~~lg~G~~~~v~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~---~~~~~~e~~~l~~l~h-~~i~~~~~~~~~-~~~   75 (259)
T cd05037           1 EHLGQGTFTNIYKGVLRVQSDLDIVGPGQEVSVVLKVLGSDHRD---SLAFFETASLMSQLSH-KHLVKLYGVCVR-DEN   75 (259)
T ss_pred             CcccccccceEEEEEEeccCCccccCCccceeeeeeccccchhh---HHHHHHHHHHHHcCCC-cchhheeeEEec-CCc
Confidence            46899999999999987666          34777776544321   3468899999999998 999999998877 778


Q ss_pred             EEEEeccCcccHHHHHHhcC-CCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          81 ILLLELLTSAVDSKIRESFG-SKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        81 ~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      ++++||+++++|.+++.... .++...+..++.|++.|++|||+.++
T Consensus        76 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i  122 (259)
T cd05037          76 IMVEEYVKFGPLDVFLHREKNNVSLHWKLDVAKQLASALHYLEDKKL  122 (259)
T ss_pred             EEEEEcCCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHhhCCe
Confidence            99999999999999887655 78999999999999999999998764

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki

>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=99.80  E-value=4.2e-19  Score=113.16  Aligned_cols=113  Identities=11%  Similarity=0.047  Sum_probs=94.0

Q ss_pred             eeccCccceeEEEEEEccCCc-------EEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeEEEE
Q psy8006          11 IINDMGKYATVRRCRDRKNGT-------QYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILL   83 (126)
Q Consensus        11 ~~lg~g~~~~v~~~~~~~~~~-------~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~~lv   83 (126)
                      +.||+|+||.||++.+...+.       .+++|.+....  ......+..|+.++..++| ||++++++.+..+...++|
T Consensus         1 ~~lg~G~~~~Vy~~~~~~~~~~~~~~~~~~~~k~~~~~~--~~~~~~~~~e~~~l~~~~h-~~iv~~~~~~~~~~~~~lv   77 (258)
T cd05078           1 ESLGQGTFTKIFKGIRREVGDYGELHKTEVLLKVLDKSH--RNYSESFFEAASMMSQLSH-KHLVLNYGVCVCGDESIMV   77 (258)
T ss_pred             CCCCcccchhheeeeecccccccccccchhhHHhhcchh--HHHHHHHHHHHHHHHhCCC-CChhheeeEEEeCCCcEEE
Confidence            368999999999998755443       47888775432  2233467889999999998 9999999999988899999


Q ss_pred             EeccCcccHHHHHHhc-CCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          84 LELLTSAVDSKIRESF-GSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        84 ~e~~~~~~L~~~~~~~-~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      |||+++++|.+++..+ ..+++..+..++.|++.|++|||+.++
T Consensus        78 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i  121 (258)
T cd05078          78 QEYVKFGSLDTYLKKNKNLINISWKLEVAKQLAWALHFLEDKGL  121 (258)
T ss_pred             EecCCCCcHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence            9999999999988754 468999999999999999999999874

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity

>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases

Probab=99.80  E-value=5.5e-18  Score=107.97  Aligned_cols=117  Identities=15%  Similarity=0.109  Sum_probs=100.6

Q ss_pred             ccccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeEEEEE
Q psy8006           5 KNIISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLL   84 (126)
Q Consensus         5 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~~lv~   84 (126)
                      ++|...+.||+|++|.||++.+. .+..+++|.+......   ...+.+|+.+++.++| |+++++++.+......+++|
T Consensus         6 ~~~~i~~~ig~g~~~~v~~~~~~-~~~~~~vK~~~~~~~~---~~~~~~e~~~l~~l~h-~~i~~~~~~~~~~~~~~~v~   80 (261)
T cd05034           6 ESLKLERKLGAGQFGEVWMGTWN-GTTKVAVKTLKPGTMS---PEAFLQEAQIMKKLRH-DKLVQLYAVCSEEEPIYIVT   80 (261)
T ss_pred             hheeeeeeeccCcceEEEEEEEc-CCceEEEEEecCCccC---HHHHHHHHHHHhhCCC-CCEeeeeeeeecCCceEEEE
Confidence            45777889999999999999875 4567999998765432   3468899999999998 99999999998888999999


Q ss_pred             eccCcccHHHHHHhc--CCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          85 ELLTSAVDSKIRESF--GSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        85 e~~~~~~L~~~~~~~--~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      |++++++|.+++...  ..++...+..++.|++.|+.|||+.++
T Consensus        81 e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~i~~al~~lh~~~i  124 (261)
T cd05034          81 EYMSKGSLLDFLKSGEGKKLRLPQLVDMAAQIAEGMAYLESRNY  124 (261)
T ss_pred             eccCCCCHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhCCc
Confidence            999999999888653  368999999999999999999998763

Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t

>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6

Probab=99.80  E-value=8.9e-18  Score=108.57  Aligned_cols=119  Identities=18%  Similarity=0.201  Sum_probs=94.1

Q ss_pred             cccceeeccCccceeEEEEEEcc-CCcEEEEEEeecCCCCchhHHHHHHHHHHHHHh---cCCCCceeeeeeeE-----e
Q psy8006           6 NIISSIINDMGKYATVRRCRDRK-NGTQYAAKFLRKKRRSTDLKAEILHEVAVLEAC---RCNSRIVQLHQVFE-----S   76 (126)
Q Consensus         6 ~~~~~~~lg~g~~~~v~~~~~~~-~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~---~~~~~iv~l~~~~~-----~   76 (126)
                      .|...+.||+|+||.||+|.+.. .+..+|+|.+..............+|+.++..+   +| |||+++++.+.     .
T Consensus         2 ~Y~~~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h-pniv~~~~~~~~~~~~~   80 (290)
T cd07862           2 QYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEH-PNVVRLFDVCTVSRTDR   80 (290)
T ss_pred             CcceeeEeccCCCeEEEEEEEcCCCCeEEEEEEEecccCCCCchHHHHHHHHHHHhhcccCC-CCcceEEEEEecccCCC
Confidence            46677889999999999999854 467899999986554333334566788877776   46 99999999875     2


Q ss_pred             CCeEEEEEeccCcccHHHHHHhc--CCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          77 SHDMILLLELLTSAVDSKIRESF--GSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        77 ~~~~~lv~e~~~~~~L~~~~~~~--~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      ....+++||++++ +|.+++...  ..+++..+..++.|++.|++|||+.++
T Consensus        81 ~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~i  131 (290)
T cd07862          81 ETKLTLVFEHVDQ-DLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHRV  131 (290)
T ss_pred             CCcEEEEEccCCC-CHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence            3468999999986 487777642  358999999999999999999998764

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla

>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins

Probab=99.79  E-value=7.2e-18  Score=109.98  Aligned_cols=119  Identities=18%  Similarity=0.189  Sum_probs=100.0

Q ss_pred             cccceeeccCccceeEEEEEEccCCcEEEEEEeecCCC-CchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeEEEEE
Q psy8006           6 NIISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRR-STDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLL   84 (126)
Q Consensus         6 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~-~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~~lv~   84 (126)
                      .|...+.||+|+||.||.+.+..++..+++|.+..... .......+.+|+.+++.++| ||++++.+.+..++..++|+
T Consensus        16 ~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~Ei~~l~~l~h-~niv~~~~~~~~~~~~~lv~   94 (307)
T cd06607          16 LFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQQLRH-PNTIEYKGCYLREHTAWLVM   94 (307)
T ss_pred             hhhhheeecCCCCeEEEEEEEcCCCcEEEEEEEeccccCcHHHHHHHHHHHHHHHhCCC-CCEEEEEEEEEeCCeEEEEH
Confidence            35667889999999999999988899999999875433 22334468899999999998 99999999999999999999


Q ss_pred             eccCcccHHHHHH-hcCCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          85 ELLTSAVDSKIRE-SFGSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        85 e~~~~~~L~~~~~-~~~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      ||++++ +.+++. ....+++..+..++.|++.++.|||..++
T Consensus        95 e~~~g~-l~~~~~~~~~~l~~~~~~~~~~ql~~~L~~LH~~~i  136 (307)
T cd06607          95 EYCLGS-ASDILEVHKKPLQEVEIAAICHGALQGLAYLHSHER  136 (307)
T ss_pred             HhhCCC-HHHHHHHcccCCCHHHHHHHHHHHHHHHHHHHHCCc
Confidence            999865 655554 34578999999999999999999998763

Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily

>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1

Probab=99.79  E-value=4.2e-18  Score=110.60  Aligned_cols=121  Identities=16%  Similarity=0.128  Sum_probs=99.1

Q ss_pred             ccccceeeccCccceeEEEEEEccCCc--EEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeEEE
Q psy8006           5 KNIISSIINDMGKYATVRRCRDRKNGT--QYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMIL   82 (126)
Q Consensus         5 ~~~~~~~~lg~g~~~~v~~~~~~~~~~--~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~~l   82 (126)
                      ++|...++||+|+||.||++....++.  .+++|.+.... .....+.+.+|+.++.++.+|||++++++.+...+..++
T Consensus         2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~ik~~~~~~-~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~l   80 (297)
T cd05089           2 EDIKFEDVIGEGNFGQVIRAMIKKDGLKMNAAIKMLKEFA-SENDHRDFAGELEVLCKLGHHPNIINLLGACENRGYLYI   80 (297)
T ss_pred             ccceeeeeecCCCcceEEEEEecCCCCcceeEEEEccccC-CHHHHHHHHHHHHHHHhhcCCCchhheEEEEccCCcceE
Confidence            567778899999999999998876664  46888776322 223345688999999999544999999999988889999


Q ss_pred             EEeccCcccHHHHHHhc----------------CCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          83 LLELLTSAVDSKIRESF----------------GSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        83 v~e~~~~~~L~~~~~~~----------------~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      ++||+++++|.+++...                ..+++..+..++.|++.|++|||+.++
T Consensus        81 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~lH~~~i  140 (297)
T cd05089          81 AIEYAPYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQFASDVATGMQYLSEKQF  140 (297)
T ss_pred             EEEecCCCcHHHHHHhccccccccccccccCccCCCCHHHHHHHHHHHHHHHHHHHHCCc
Confidence            99999999999888642                247888999999999999999998764

Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.

>KOG0662|consensus

Probab=99.79  E-value=6.1e-19  Score=105.43  Aligned_cols=118  Identities=20%  Similarity=0.241  Sum_probs=104.8

Q ss_pred             ccccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeEEEEE
Q psy8006           5 KNIISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLL   84 (126)
Q Consensus         5 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~~lv~   84 (126)
                      .+|-.-+.||+|.+|+|++++++.+...||+|.++...-+++.....++|+.+++.++| .|||++++...++..+-+|+
T Consensus         2 ~~ydkmekigegtygtvfkarn~~t~eivalkrvrlddddegvpssalreicllkelkh-knivrl~dvlhsdkkltlvf   80 (292)
T KOG0662|consen    2 QKYDKMEKIGEGTYGTVFKARNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKH-KNIVRLHDVLHSDKKLTLVF   80 (292)
T ss_pred             cchHHHHhhcCCcceeeEecccCCccceEEEEEEeccCCCCCCcHHHHHHHHHHHHhhh-cceeehhhhhccCceeEEeH
Confidence            45566778999999999999999999999999999877666666678999999999999 99999999999999999999


Q ss_pred             eccCcccHHHHHHh-cCCCCHHHHHHHHHHHHHHHHhhhcc
Q psy8006          85 ELLTSAVDSKIRES-FGSKSESGVQNCLEPSISVFSSLSKF  124 (126)
Q Consensus        85 e~~~~~~L~~~~~~-~~~~~~~~~~~~~~qi~~~l~~l~~~  124 (126)
                      |||+.+ |..+..+ ++.++...++.++.|++.++.+-|.-
T Consensus        81 e~cdqd-lkkyfdslng~~d~~~~rsfmlqllrgl~fchsh  120 (292)
T KOG0662|consen   81 EFCDQD-LKKYFDSLNGDLDPEIVRSFMLQLLRGLGFCHSH  120 (292)
T ss_pred             HHhhHH-HHHHHHhcCCcCCHHHHHHHHHHHHhhhhhhhhh
Confidence            999998 7666654 67899999999999999999998853

>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase

Probab=99.79  E-value=4.7e-18  Score=112.51  Aligned_cols=118  Identities=19%  Similarity=0.215  Sum_probs=98.2

Q ss_pred             cccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCC------e
Q psy8006           6 NIISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSH------D   79 (126)
Q Consensus         6 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~------~   79 (126)
                      +|...+.||+|++|.||++.+..++..+|+|.+............+.+|+.+++.++| ||++++.+.+....      .
T Consensus        16 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h-~~iv~~~~~~~~~~~~~~~~~   94 (343)
T cd07880          16 RYRDLKQVGSGAYGTVCSALDRRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMKH-ENVIGLLDVFTPDLSLDRFHD   94 (343)
T ss_pred             ceEEEEEeeecCCeEEEEEEECCCCcEEEEEEecccccchHHHHHHHHHHHHHHhcCC-CCccceeeeecCCccccccce
Confidence            4667889999999999999999999999999986543333334468899999999998 99999999886543      3


Q ss_pred             EEEEEeccCcccHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          80 MILLLELLTSAVDSKIRESFGSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        80 ~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      .++++|++ +++|..++.. ..+++..++.++.|++.|++|||+.++
T Consensus        95 ~~lv~e~~-~~~l~~~~~~-~~l~~~~~~~i~~qi~~al~~LH~~gi  139 (343)
T cd07880          95 FYLVMPFM-GTDLGKLMKH-EKLSEDRIQFLVYQMLKGLKYIHAAGI  139 (343)
T ss_pred             EEEEEecC-CCCHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCe
Confidence            58999998 5568777764 568999999999999999999999764

Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12

>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins

Probab=99.79  E-value=3e-18  Score=111.54  Aligned_cols=122  Identities=14%  Similarity=0.142  Sum_probs=100.5

Q ss_pred             ccccccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeC-----
Q psy8006           3 NIKNIISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESS-----   77 (126)
Q Consensus         3 ~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~-----   77 (126)
                      .+.+|...+.||+|++|.||++.+..++..+++|.+..............+|+.+++.++| ||++++++.+...     
T Consensus         6 ~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h-~~i~~~~~~~~~~~~~~~   84 (311)
T cd07866           6 KLRDYEILGKLGEGTFGEVYKARQIKTGRVVALKKILMHNEKDGFPITALREIKILKKLKH-PNVVPLIDMAVERPDKSK   84 (311)
T ss_pred             ccccEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEEeccCCCCcchhHHHHHHHHHhcCC-CCccchhhheeccccccc
Confidence            4678889999999999999999999999999999997654433333357789999999998 9999999877432     


Q ss_pred             ---CeEEEEEeccCcccHHHHHH-hcCCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          78 ---HDMILLLELLTSAVDSKIRE-SFGSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        78 ---~~~~lv~e~~~~~~L~~~~~-~~~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                         ...++++||++++ +...+. ....+++..+..++.|+++|++|||+.++
T Consensus        85 ~~~~~~~lv~~~~~~~-l~~~~~~~~~~~~~~~~~~i~~~l~~al~~lH~~~i  136 (311)
T cd07866          85 RKRGSVYMVTPYMDHD-LSGLLENPSVKLTESQIKCYMLQLLEGINYLHENHI  136 (311)
T ss_pred             ccCceEEEEEecCCcC-HHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhCCe
Confidence               3479999999876 555444 34579999999999999999999998764

Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic

>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk

Probab=99.79  E-value=1.9e-18  Score=110.09  Aligned_cols=118  Identities=13%  Similarity=0.092  Sum_probs=101.8

Q ss_pred             ccccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeEEEEE
Q psy8006           5 KNIISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLL   84 (126)
Q Consensus         5 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~~lv~   84 (126)
                      .+|...+.||+|++|.||++.+.. +..+++|.+.....  .....+.+|+.+++.++| ||++++++.+......+++|
T Consensus         6 ~~y~~~~~ig~g~~~~vy~~~~~~-~~~~~~k~~~~~~~--~~~~~~~~e~~~l~~l~~-~~i~~~~~~~~~~~~~~lv~   81 (261)
T cd05148           6 EEFTLERKLGSGYFGEVWEGLWKN-RVRVAIKILKSDDL--LKQQDFQKEVQALKRLRH-KHLISLFAVCSVGEPVYIIT   81 (261)
T ss_pred             HHHHHhhhhccCCCccEEEeEecC-CCcEEEEeccccch--hhHHHHHHHHHHHhcCCC-cchhheeeeEecCCCeEEEE
Confidence            456777899999999999999877 88899999876532  223468899999999998 99999999999999999999


Q ss_pred             eccCcccHHHHHHhc--CCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          85 ELLTSAVDSKIRESF--GSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        85 e~~~~~~L~~~~~~~--~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      ||+++++|.+++.+.  ..++...+..++.|++.|+.|||+.++
T Consensus        82 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i  125 (261)
T cd05148          82 ELMEKGSLLAFLRSPEGQVLPVASLIDMACQVAEGMAYLEEQNS  125 (261)
T ss_pred             eecccCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence            999999999988752  468999999999999999999998763

Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom

>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase

Probab=99.79  E-value=8.4e-18  Score=107.69  Aligned_cols=118  Identities=16%  Similarity=0.179  Sum_probs=98.4

Q ss_pred             cccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeC------Ce
Q psy8006           6 NIISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESS------HD   79 (126)
Q Consensus         6 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~------~~   79 (126)
                      .|...+.||+|+||.||.+.+..++..+|+|.+.....   ....+.+|+.++..+.+|||++++.+.+...      ..
T Consensus         7 ~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~---~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~~   83 (272)
T cd06637           7 IFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGD---EEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDDQ   83 (272)
T ss_pred             hhhHHHheeecCCeEEEEEEEcCCCcEEEEEEEEcCCc---cHHHHHHHHHHHHHhcCCCCeeeEeeEEeecCCCCCCcE
Confidence            35556789999999999999999999999999875432   2336788999999985449999999988642      46


Q ss_pred             EEEEEeccCcccHHHHHHhc--CCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          80 MILLLELLTSAVDSKIRESF--GSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        80 ~~lv~e~~~~~~L~~~~~~~--~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      .|++|||+++++|.+++...  ..+++..+..++.|++.|++|||..++
T Consensus        84 ~~iv~e~~~~~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~i  132 (272)
T cd06637          84 LWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQHKV  132 (272)
T ss_pred             EEEEEEcCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCC
Confidence            89999999999999888753  468999999999999999999998764

Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ

>PTZ00036 glycogen synthase kinase; Provisional

Probab=99.79  E-value=5.6e-18  Score=115.48  Aligned_cols=114  Identities=11%  Similarity=0.009  Sum_probs=93.4

Q ss_pred             ccccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeC-------
Q psy8006           5 KNIISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESS-------   77 (126)
Q Consensus         5 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~-------   77 (126)
                      .+|...+.||+|+||.||+|.+..++..+|+|.+....      ....+|+.+++.++| ||++++.+++...       
T Consensus        66 ~~y~~~~~LG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~------~~~~~Ei~il~~l~h-~niv~l~~~~~~~~~~~~~~  138 (440)
T PTZ00036         66 KSYKLGNIIGNGSFGVVYEAICIDTSEKVAIKKVLQDP------QYKNRELLIMKNLNH-INIIFLKDYYYTECFKKNEK  138 (440)
T ss_pred             CeEEEeEEEEeCCCEEEEEEEECCCCCEEEEEEEecCc------chHHHHHHHHHhcCC-CCCcceeeeEeecccccCCC
Confidence            45778899999999999999999999999999886432      134579999999998 9999998876432       


Q ss_pred             -CeEEEEEeccCcccHHHHHH----hcCCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          78 -HDMILLLELLTSAVDSKIRE----SFGSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        78 -~~~~lv~e~~~~~~L~~~~~----~~~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                       ..+++||||++++ +.+++.    ....+++..++.++.|++.||+|||+.++
T Consensus       139 ~~~l~lvmE~~~~~-l~~~~~~~~~~~~~l~~~~~~~~~~qi~~gL~yLH~~~I  191 (440)
T PTZ00036        139 NIFLNVVMEFIPQT-VHKYMKHYARNNHALPLFLVKLYSYQLCRALAYIHSKFI  191 (440)
T ss_pred             ceEEEEEEecCCcc-HHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCE
Confidence             2577999999976 655543    34579999999999999999999998764

>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6

Probab=99.79  E-value=8.2e-18  Score=108.30  Aligned_cols=117  Identities=15%  Similarity=0.104  Sum_probs=94.7

Q ss_pred             cccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeEEEEEe
Q psy8006           6 NIISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLLE   85 (126)
Q Consensus         6 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~~lv~e   85 (126)
                      +|...+.||+|+||.||++.+..++..+|+|.++...... ....+..|+..+.+..+|||++++++.+..++..|+++|
T Consensus         2 ~~~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~-~~~~~~~e~~~~~~~~~~~~iv~~~~~~~~~~~~~lv~e   80 (283)
T cd06617           2 DLEVIEELGRGAYGVVDKMRHVPTGTIMAVKRIRATVNSQ-EQKRLLMDLDISMRSVDCPYTVTFYGALFREGDVWICME   80 (283)
T ss_pred             CceEEEEecccCCeEEEEEEEcCCCcEEEEEEEecCCCcH-HHHHHHHHHHHHHHHcCCCCeeeeeEEEecCCcEEEEhh
Confidence            5667788999999999999999999999999998654322 233566677765554444999999999998999999999


Q ss_pred             ccCcccHHHHHHh----cCCCCHHHHHHHHHHHHHHHHhhhcc
Q psy8006          86 LLTSAVDSKIRES----FGSKSESGVQNCLEPSISVFSSLSKF  124 (126)
Q Consensus        86 ~~~~~~L~~~~~~----~~~~~~~~~~~~~~qi~~~l~~l~~~  124 (126)
                      |++++ |.+++..    ...+++..+..++.|++.|++|||+.
T Consensus        81 ~~~~~-l~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~  122 (283)
T cd06617          81 VMDTS-LDKFYKKVYDKGLTIPEDILGKIAVSIVKALEYLHSK  122 (283)
T ss_pred             hhccc-HHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhhc
Confidence            99854 7666543    34689999999999999999999974

Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs

>PHA03209 serine/threonine kinase US3; Provisional

Probab=99.79  E-value=3.1e-18  Score=113.97  Aligned_cols=111  Identities=10%  Similarity=-0.020  Sum_probs=95.6

Q ss_pred             cccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeEEEEEe
Q psy8006           6 NIISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLLE   85 (126)
Q Consensus         6 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~~lv~e   85 (126)
                      +|...+.||+|+||.||+|.+..++..+|+|.....        ....|+.++.+++| |||+++++.+...+..++|+|
T Consensus        67 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~valK~~~~~--------~~~~E~~~l~~l~h-~~iv~~~~~~~~~~~~~lv~e  137 (357)
T PHA03209         67 GYTVIKTLTPGSEGRVFVATKPGQPDPVVLKIGQKG--------TTLIEAMLLQNVNH-PSVIRMKDTLVSGAITCMVLP  137 (357)
T ss_pred             CcEEEEEecCCCCeEEEEEEECCCCceEEEEeCCcc--------ccHHHHHHHHhCCC-CCCcChhheEEeCCeeEEEEE
Confidence            577788999999999999999999999999975433        23468899999999 999999999999999999999


Q ss_pred             ccCcccHHHHHHh-cCCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          86 LLTSAVDSKIRES-FGSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        86 ~~~~~~L~~~~~~-~~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      ++.++ |.+++.. ...+++..+..++.|++.|+.|||+.++
T Consensus       138 ~~~~~-l~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~i  178 (357)
T PHA03209        138 HYSSD-LYTYLTKRSRPLPIDQALIIEKQILEGLRYLHAQRI  178 (357)
T ss_pred             ccCCc-HHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence            99765 7666654 4579999999999999999999999764

>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A

Probab=99.79  E-value=5.6e-18  Score=109.19  Aligned_cols=121  Identities=13%  Similarity=0.163  Sum_probs=100.5

Q ss_pred             ccccccceeeccCccceeEEEEEE-----ccCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeC
Q psy8006           3 NIKNIISSIINDMGKYATVRRCRD-----RKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESS   77 (126)
Q Consensus         3 ~~~~~~~~~~lg~g~~~~v~~~~~-----~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~   77 (126)
                      +.+++...+.||+|+||.||.+..     ..++..+++|.+....  ......+.+|+.++..++| +|++++++.+...
T Consensus         3 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~--~~~~~~~~~e~~~l~~l~h-~~i~~~~~~~~~~   79 (280)
T cd05092           3 KRRDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEAS--ESARQDFQREAELLTVLQH-QHIVRFYGVCTEG   79 (280)
T ss_pred             ChHhceeccccCCccCCeEEEeEEecCCCCCCceEEEEEecCcCC--HHHHHHHHHHHHHHhcCCC-CCCceEEEEEecC
Confidence            356788889999999999999864     2345678889876442  2334468999999999998 9999999999988


Q ss_pred             CeEEEEEeccCcccHHHHHHhcC---------------CCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          78 HDMILLLELLTSAVDSKIRESFG---------------SKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        78 ~~~~lv~e~~~~~~L~~~~~~~~---------------~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      ...++++||+++++|.+++....               .+++..+..++.|++.|++|||+.++
T Consensus        80 ~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~~i  143 (280)
T cd05092          80 RPLLMVFEYMRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQIASGMVYLASLHF  143 (280)
T ss_pred             CceEEEEecCCCCCHHHHHHhcCcchhhhcccccCCccccCHHHHHHHHHHHHHHHHHHHHCCe
Confidence            89999999999999988886532               47889999999999999999998764

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory

>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases

Probab=99.79  E-value=3.2e-18  Score=111.02  Aligned_cols=120  Identities=15%  Similarity=0.170  Sum_probs=98.4

Q ss_pred             ccccceeeccCccceeEEEEEEccC--------------CcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceee
Q psy8006           5 KNIISSIINDMGKYATVRRCRDRKN--------------GTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQL   70 (126)
Q Consensus         5 ~~~~~~~~lg~g~~~~v~~~~~~~~--------------~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l   70 (126)
                      +.|...+.||+|+||.||.+.+..+              ...+|+|.++.... ......+.+|++++.+++| ||++++
T Consensus         5 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~ei~~l~~l~h-~~i~~~   82 (295)
T cd05097           5 QQLRLKEKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADVT-KTARNDFLKEIKIMSRLKN-PNIIRL   82 (295)
T ss_pred             HhCeehhccCCCCCceEEecccccchhhccccCcccCCCceEEEEEecCCCCC-HHHHHHHHHHHHHHHhCCC-CCcCeE
Confidence            3566678899999999999886543              22589999876432 3334468999999999999 999999


Q ss_pred             eeeeEeCCeEEEEEeccCcccHHHHHHhcC------------CCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          71 HQVFESSHDMILLLELLTSAVDSKIRESFG------------SKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        71 ~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~------------~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      ++.+...+..+++|||+++++|.+++....            .++...+..++.|++.|++|||+.++
T Consensus        83 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i  150 (295)
T cd05097          83 LGVCVSDDPLCMITEYMENGDLNQFLSQREIESTFTHANNIPSVSIANLLYMAVQIASGMKYLASLNF  150 (295)
T ss_pred             EEEEcCCCccEEEEecCCCCcHHHHHHhccccccccccccCCcccHHHHHHHHHHHHHHHHHHHhcCe
Confidence            999998899999999999999988885431            36788889999999999999998763

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including

>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases

Probab=99.79  E-value=7.1e-18  Score=108.13  Aligned_cols=115  Identities=17%  Similarity=0.136  Sum_probs=94.3

Q ss_pred             eeccCccceeEEEEEEccCCc--EEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeEEEEEeccC
Q psy8006          11 IINDMGKYATVRRCRDRKNGT--QYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLLELLT   88 (126)
Q Consensus        11 ~~lg~g~~~~v~~~~~~~~~~--~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~~lv~e~~~   88 (126)
                      ++||+|+||.||++....++.  .+++|.+.... .......+.+|+.++.++.+|||++++++.+...+..+++|||++
T Consensus         1 ~~lg~g~~g~v~~~~~~~~~~~~~~~~k~~~~~~-~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~   79 (270)
T cd05047           1 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYA-SKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAP   79 (270)
T ss_pred             CcCCCCCCceEEEEEEcCCCCeeEEEEEEccccC-CHHHHHHHHHHHHHHHhhccCCCeeeEEEEEecCCCceEEEEeCC
Confidence            368999999999999887776  45778776432 223344688999999999544999999999998889999999999


Q ss_pred             cccHHHHHHhcC----------------CCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          89 SAVDSKIRESFG----------------SKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        89 ~~~L~~~~~~~~----------------~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      +++|.+++....                .++...+..++.|++.|++|||+.++
T Consensus        80 ~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~al~~lH~~~i  133 (270)
T cd05047          80 HGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQF  133 (270)
T ss_pred             CCcHHHHHHhccccccccccccccCCcCCCCHHHHHHHHHHHHHHHHHHHHCCE
Confidence            999998886432                47889999999999999999998753

Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l

>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases

Probab=99.79  E-value=4.1e-18  Score=107.80  Aligned_cols=113  Identities=22%  Similarity=0.247  Sum_probs=100.0

Q ss_pred             ccCccceeEEEEEEccCCcEEEEEEeecCCCCch-hHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeEEEEEeccCccc
Q psy8006          13 NDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTD-LKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLLELLTSAV   91 (126)
Q Consensus        13 lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~-~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~~lv~e~~~~~~   91 (126)
                      ||+|++|.||.+.+..++..+++|.+........ ....+..|+.+++.++| |+++++++.+..+...+++||++++++
T Consensus         1 lg~G~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~l~h-~~i~~~~~~~~~~~~~~~v~e~~~~~~   79 (250)
T cd05123           1 LGKGSFGKVLLVRKKDTGKLYAMKVLKKKKIIKRKEVEHTLTERNILSRINH-PFIVKLHYAFQTEEKLYLVLEYAPGGE   79 (250)
T ss_pred             CCCCCceEEEEEEECCCCcEEEEEEeehhhhcchHHHHHHHHHHHHHHHcCC-CcHHHHHHHeecCCeeEEEEecCCCCc
Confidence            6899999999999988899999999987654322 33468889999999998 999999999999999999999999999


Q ss_pred             HHHHHHhcCCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          92 DSKIRESFGSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        92 L~~~~~~~~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      |.+++.....+++..+..++.|++.++.|||+.++
T Consensus        80 L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lh~~~~  114 (250)
T cd05123          80 LFSHLSKEGRFSEERARFYAAEIVLALEYLHSLGI  114 (250)
T ss_pred             HHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCc
Confidence            99999887789999999999999999999998763

Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the

>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=99.79  E-value=6e-18  Score=109.18  Aligned_cols=119  Identities=16%  Similarity=0.151  Sum_probs=98.8

Q ss_pred             cccceeeccCccceeEEEEEE----ccCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeC--Ce
Q psy8006           6 NIISSIINDMGKYATVRRCRD----RKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESS--HD   79 (126)
Q Consensus         6 ~~~~~~~lg~g~~~~v~~~~~----~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~--~~   79 (126)
                      .|...+.||+|+||.||.+..    ..++..+|+|.+..... ......+.+|+.+++.++| ||++++.+.+...  ..
T Consensus         5 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~va~K~~~~~~~-~~~~~~~~~e~~~l~~l~h-~~i~~~~~~~~~~~~~~   82 (284)
T cd05079           5 FLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESG-GNHIADLKKEIEILRNLYH-ENIVKYKGICTEDGGNG   82 (284)
T ss_pred             hhhhceecCCCCceeEEEEEEccCCCCccceEEEEEcCcccc-HHHHHHHHHHHHHHHhCCC-CCeeeeeeEEecCCCCc
Confidence            456678899999999999974    45678899999875432 2234468999999999998 9999999988764  56


Q ss_pred             EEEEEeccCcccHHHHHHhc-CCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          80 MILLLELLTSAVDSKIRESF-GSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        80 ~~lv~e~~~~~~L~~~~~~~-~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      .+++|||+++++|.+++... ..++...+..++.|++.|++|||+.++
T Consensus        83 ~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~i~~~i~~aL~~lH~~gi  130 (284)
T cd05079          83 IKLIMEFLPSGSLKEYLPRNKNKINLKQQLKYAVQICKGMDYLGSRQY  130 (284)
T ss_pred             eEEEEEccCCCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence            89999999999999988654 358999999999999999999998764

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a

>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase

Probab=99.79  E-value=4.6e-18  Score=108.11  Aligned_cols=113  Identities=18%  Similarity=0.155  Sum_probs=96.3

Q ss_pred             eeccCccceeEEEEEEcc-CC--cEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeEEEEEecc
Q psy8006          11 IINDMGKYATVRRCRDRK-NG--TQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLLELL   87 (126)
Q Consensus        11 ~~lg~g~~~~v~~~~~~~-~~--~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~~lv~e~~   87 (126)
                      +.||+|++|.||++.+.. .+  ..+|+|.+...... .....+.+|+.++.+++| ||++++++.+.. ...++++|++
T Consensus         1 ~~ig~g~~~~v~~~~~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~e~~~l~~l~h-~~iv~~~~~~~~-~~~~~v~e~~   77 (257)
T cd05040           1 KKLGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLS-DIMDDFLKEAAIMHSLDH-ENLIRLYGVVLT-HPLMMVTELA   77 (257)
T ss_pred             CcCCccCcccEEeeeEecCCCCceEEEEeecCCcccH-HHHHHHHHHHHHHhhcCC-CCccceeEEEcC-CeEEEEEEec
Confidence            468999999999998755 33  36899999876553 345568999999999998 999999999887 8899999999


Q ss_pred             CcccHHHHHHhcC--CCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          88 TSAVDSKIRESFG--SKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        88 ~~~~L~~~~~~~~--~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      ++++|.+++.+..  .+++..+..++.|++.|++|||+.++
T Consensus        78 ~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i  118 (257)
T cd05040          78 PLGSLLDRLRKDALGHFLISTLCDYAVQIANGMRYLESKRF  118 (257)
T ss_pred             CCCcHHHHHHhcccccCcHHHHHHHHHHHHHHHHHHHhCCc
Confidence            9999998887643  68999999999999999999998764

Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and

>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases

Probab=99.79  E-value=5.9e-18  Score=107.93  Aligned_cols=117  Identities=15%  Similarity=0.098  Sum_probs=99.9

Q ss_pred             ccccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeEEEEE
Q psy8006           5 KNIISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLL   84 (126)
Q Consensus         5 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~~lv~   84 (126)
                      .++...+.||+|++|.||++.+.. +..+|+|.+......   ...+.+|+.++.+++| ||++++++.+...+..+++|
T Consensus         6 ~~~~~~~~lg~g~~~~v~~~~~~~-~~~v~iK~~~~~~~~---~~~~~~e~~~l~~l~h-~~i~~~~~~~~~~~~~~lv~   80 (261)
T cd05068           6 TSIQLLRKLGAGQFGEVWEGLWNN-TTPVAVKTLKPGTMD---PKDFLAEAQIMKKLRH-PKLIQLYAVCTLEEPIYIVT   80 (261)
T ss_pred             hheeeEEEecccCCccEEEEEecC-CeEEEEEeeCCCccc---HHHHHHHHHHHHHCCC-CCccceeEEEecCCCeeeee
Confidence            346667899999999999998754 467999998764332   3468899999999998 99999999999888999999


Q ss_pred             eccCcccHHHHHHhcC--CCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          85 ELLTSAVDSKIRESFG--SKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        85 e~~~~~~L~~~~~~~~--~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      |++++++|.+++....  .++...+..++.|++.|+.+||+.++
T Consensus        81 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i  124 (261)
T cd05068          81 ELMKYGSLLEYLQGGAGRALKLPQLIDMAAQVASGMAYLEAQNY  124 (261)
T ss_pred             ecccCCcHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCe
Confidence            9999999999887543  68999999999999999999998763

Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a

>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases

Probab=99.79  E-value=4.3e-18  Score=109.45  Aligned_cols=120  Identities=17%  Similarity=0.131  Sum_probs=100.6

Q ss_pred             ccccceeeccCccceeEEEEEEcc-----CCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCe
Q psy8006           5 KNIISSIINDMGKYATVRRCRDRK-----NGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHD   79 (126)
Q Consensus         5 ~~~~~~~~lg~g~~~~v~~~~~~~-----~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~   79 (126)
                      .+|...+.||+|+||.||+|.+..     ++..+|+|.+..... ......+.+|+.++..++| ||++++++.+.....
T Consensus         5 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~e~~~l~~l~~-~~i~~~~~~~~~~~~   82 (280)
T cd05049           5 DTIVLKRELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETAS-NDARKDFEREAELLTNFQH-ENIVKFYGVCTEGDP   82 (280)
T ss_pred             HHhhHHhhccccCCceEeeeeeccccCcCCcceEEEEeecccCC-HHHHHHHHHHHHHHHhcCC-CCchheeeEEecCCC
Confidence            456677899999999999998643     357899999875432 2234568999999999998 999999999999999


Q ss_pred             EEEEEeccCcccHHHHHHhc--------------CCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          80 MILLLELLTSAVDSKIRESF--------------GSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        80 ~~lv~e~~~~~~L~~~~~~~--------------~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      .+++|||+++++|.+++...              ..+++..+..++.|++.++++||+.++
T Consensus        83 ~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~i  143 (280)
T cd05049          83 PIMVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIAVQIASGMVYLASQHF  143 (280)
T ss_pred             eEEEEecCCCCCHHHHHHhcCCchhhhcccccccccccHHHHHHHHHHHHHHHHHHhhCCe
Confidence            99999999999999888643              247888999999999999999998763

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt

>smart00219 TyrKc Tyrosine kinase, catalytic domain

Probab=99.79  E-value=7e-18  Score=107.05  Aligned_cols=116  Identities=14%  Similarity=0.088  Sum_probs=99.5

Q ss_pred             ceeeccCccceeEEEEEEccCC----cEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeEEEEE
Q psy8006           9 SSIINDMGKYATVRRCRDRKNG----TQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLL   84 (126)
Q Consensus         9 ~~~~lg~g~~~~v~~~~~~~~~----~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~~lv~   84 (126)
                      ..+.+|.|+||.||++.+...+    ..+|+|.+...... .....+..|+..+..++| +|++++++.+...+..+++|
T Consensus         3 ~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~e~~~l~~l~~-~~i~~~~~~~~~~~~~~~i~   80 (258)
T smart00219        3 LGKKLGEGAFGEVYKGTLKGLSGEKEVEVAVKTLKEDADE-QQIEEFLREARIMRKLDH-PNIVKLLGVCTEEEPLMIVM   80 (258)
T ss_pred             ccceeccCCCcceEEEEecCCCCCCCceEEEEEccCCCCh-HHHHHHHHHHHHHHhcCC-CchheEEEEEcCCCeeEEEE
Confidence            3568999999999999988766    88999999765432 234568899999999987 99999999999889999999


Q ss_pred             eccCcccHHHHHHhcCC--CCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          85 ELLTSAVDSKIRESFGS--KSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        85 e~~~~~~L~~~~~~~~~--~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      |++++++|.+++.....  +++..+..++.|++.|+++||+.++
T Consensus        81 e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lh~~~~  124 (258)
T smart00219       81 EYMEGGDLLDYLRKNRPKELSLSDLLSFALQIARGMEYLESKNF  124 (258)
T ss_pred             eccCCCCHHHHHHhhhhccCCHHHHHHHHHHHHHHHHHHhcCCe
Confidence            99999999988875433  8999999999999999999998763

Phosphotransferases. Tyrosine-specific kinase subfamily.

>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases

Probab=99.79  E-value=1e-17  Score=107.85  Aligned_cols=117  Identities=18%  Similarity=0.247  Sum_probs=99.7

Q ss_pred             cceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeC--CeEEEEEe
Q psy8006           8 ISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESS--HDMILLLE   85 (126)
Q Consensus         8 ~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~--~~~~lv~e   85 (126)
                      ...+.+|+|++|.||++.+..++..+++|.+............+.+|+.+++.++| ||++++.+.+...  +..++++|
T Consensus         2 ~~~~~l~~g~~~~vy~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~-~~i~~~~~~~~~~~~~~~~lv~e   80 (287)
T cd07840           2 EKIAQIGEGTYGQVYKARNKKTGELVALKKIRMENEKEGFPITAIREIKLLQKLRH-PNIVRLKEIVTSKGKGSIYMVFE   80 (287)
T ss_pred             eeeEEeccCCCeEEEEEEECCCCeEEEEEEEecccccccchHHHHHHHHHHHhccC-CCeeeheeeEecCCCCcEEEEec
Confidence            34568999999999999999889999999998765323334468889999999998 9999999999877  78999999


Q ss_pred             ccCcccHHHHHHhc-CCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          86 LLTSAVDSKIRESF-GSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        86 ~~~~~~L~~~~~~~-~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      |+++ +|..++... ..+++..+..++.|++.|++|||+.++
T Consensus        81 ~~~~-~l~~~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~~  121 (287)
T cd07840          81 YMDH-DLTGLLDSPEVKFTESQIKCYMKQLLEGLQYLHSNGI  121 (287)
T ss_pred             cccc-cHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCc
Confidence            9986 587777654 579999999999999999999998763

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po

>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn

Probab=99.79  E-value=5.8e-18  Score=107.90  Aligned_cols=117  Identities=14%  Similarity=0.115  Sum_probs=99.3

Q ss_pred             ccccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeEEEEE
Q psy8006           5 KNIISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLL   84 (126)
Q Consensus         5 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~~lv~   84 (126)
                      ++|...+.||+|++|.||++... .+..+++|.+.....   ....+.+|+.++..++| +|++++++.+...+..++++
T Consensus         6 ~~~~~~~~lg~g~~g~v~~~~~~-~~~~v~iK~~~~~~~---~~~~~~~e~~~l~~l~h-~~i~~~~~~~~~~~~~~lv~   80 (261)
T cd05072           6 ESIKLVKKLGAGQFGEVWMGYYN-NSTKVAVKTLKPGTM---SVQAFLEEANLMKTLQH-DKLVRLYAVVTKEEPIYIIT   80 (261)
T ss_pred             HHeEEeeecCCcCCceEEEEEec-CCceEEEEEccCCch---hHHHHHHHHHHHHhCCC-CCeeeEEEEEcCCCCcEEEE
Confidence            46777889999999999999864 456799998765432   23468899999999998 99999999999888999999


Q ss_pred             eccCcccHHHHHHhc--CCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          85 ELLTSAVDSKIRESF--GSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        85 e~~~~~~L~~~~~~~--~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      |++++++|.+++...  ..++...+..++.|++.|++|||+.++
T Consensus        81 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~LH~~~i  124 (261)
T cd05072          81 EYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERKNY  124 (261)
T ss_pred             ecCCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence            999999999888653  468888999999999999999998763

Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa

>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase

Probab=99.79  E-value=5.4e-18  Score=109.53  Aligned_cols=119  Identities=22%  Similarity=0.222  Sum_probs=100.0

Q ss_pred             ccceeeccCccceeEEEEEEc---cCCcEEEEEEeecCCCCc--hhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeEE
Q psy8006           7 IISSIINDMGKYATVRRCRDR---KNGTQYAAKFLRKKRRST--DLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMI   81 (126)
Q Consensus         7 ~~~~~~lg~g~~~~v~~~~~~---~~~~~~aiK~~~~~~~~~--~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~~   81 (126)
                      |...+.||+|++|.||++.+.   .++..+|+|.+.......  .....+.+|+.++.++++||+++++.+.+......+
T Consensus         2 ~~~~~~ig~G~~~~vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~~~~~~~~   81 (288)
T cd05583           2 FELLRVLGTGAYGKVFLVRKVGGHDAGKLYAMKVLKKATIVQKAKTAEHTRTERQVLEAVRRCPFLVTLHYAFQTDTKLH   81 (288)
T ss_pred             ceEEEEeccCCCceEEEEEEeccccCCcEEEEEEEehHHHHhhhhHHHHHHHHHHHHHhccCCcchhhhheeeecCCEEE
Confidence            556788999999999998753   467789999997643221  223457889999999975599999999999889999


Q ss_pred             EEEeccCcccHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhhccC
Q psy8006          82 LLLELLTSAVDSKIRESFGSKSESGVQNCLEPSISVFSSLSKFE  125 (126)
Q Consensus        82 lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~l~~~~  125 (126)
                      +||||+++++|.+++.....+++..+..++.|++.+++|||..+
T Consensus        82 lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~  125 (288)
T cd05583          82 LILDYVNGGELFTHLYQREHFTESEVRVYIAEIVLALDHLHQLG  125 (288)
T ss_pred             EEEecCCCCcHHHHHhhcCCcCHHHHHHHHHHHHHHHHHHHHCC
Confidence            99999999999888877677999999999999999999999876

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines

>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases

Probab=99.79  E-value=9.6e-18  Score=107.89  Aligned_cols=120  Identities=17%  Similarity=0.184  Sum_probs=99.8

Q ss_pred             ccccceeeccCccceeEEEEEEc----cCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEe--CC
Q psy8006           5 KNIISSIINDMGKYATVRRCRDR----KNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFES--SH   78 (126)
Q Consensus         5 ~~~~~~~~lg~g~~~~v~~~~~~----~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~--~~   78 (126)
                      ..+...+.||+|+||.||++...    .++..+|+|.+...... .....+.+|+.+++.++| ||++++.+.+..  ..
T Consensus         4 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~~~avK~~~~~~~~-~~~~~~~~ei~~l~~l~~-~~i~~~~~~~~~~~~~   81 (284)
T cd05038           4 RHLKFIKQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEE-QHRSDFEREIEILRTLDH-ENIVKYKGVCEKPGGR   81 (284)
T ss_pred             hhchhheeeccCCCeeEEEeeecCCCCCCceEEEEEEeccccch-HHHHHHHHHHHHHHhCCC-CChheEEeeeecCCCC
Confidence            34555688999999999999854    44788999999865433 234569999999999998 999999988876  45


Q ss_pred             eEEEEEeccCcccHHHHHHhcC-CCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          79 DMILLLELLTSAVDSKIRESFG-SKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        79 ~~~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      ..+++|||+++++|.+++.... .++...+..++.|++.|++|||+.++
T Consensus        82 ~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~i  130 (284)
T cd05038          82 SLRLIMEYLPSGSLRDYLQRHRDQINLKRLLLFSSQICKGMDYLGSQRY  130 (284)
T ss_pred             ceEEEEecCCCCCHHHHHHhCccccCHHHHHHHHHHHHHHHHHHHhCCe
Confidence            7899999999999998887533 68999999999999999999998764

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut

>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1

Probab=99.79  E-value=1.7e-17  Score=108.77  Aligned_cols=118  Identities=14%  Similarity=0.177  Sum_probs=99.2

Q ss_pred             ccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCc-hhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeEEEEEe
Q psy8006           7 IISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRST-DLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLLE   85 (126)
Q Consensus         7 ~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~-~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~~lv~e   85 (126)
                      |...+.||+|+||.||++.+..++..+|+|.+....... +....+.+|+.+++.++| ||++++.+.+..+...+++||
T Consensus        27 f~~~~~lg~G~~~~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~~e~~~l~~l~h-~~iv~~~~~~~~~~~~~lv~e  105 (317)
T cd06635          27 FTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVKFLQRIKH-PNSIEYKGCYLREHTAWLVME  105 (317)
T ss_pred             hhhhheeccCCCeEEEEEEEcCCCcEEEEEEEecCCCCchHHHHHHHHHHHHHHhCCC-CCEEEEEEEEeeCCeEEEEEe
Confidence            456678999999999999998899999999987653322 333468889999999998 999999999999999999999


Q ss_pred             ccCcccHHHHHH-hcCCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          86 LLTSAVDSKIRE-SFGSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        86 ~~~~~~L~~~~~-~~~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      |+.++ +.+++. ....+++..+..++.|++.++.|||+.++
T Consensus       106 ~~~g~-l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~i  146 (317)
T cd06635         106 YCLGS-ASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSHNM  146 (317)
T ss_pred             CCCCC-HHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCc
Confidence            99865 655554 45578999999999999999999998764

Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron

>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases

Probab=99.79  E-value=9.7e-18  Score=107.91  Aligned_cols=119  Identities=18%  Similarity=0.151  Sum_probs=99.0

Q ss_pred             ccccceeeccCccceeEEEEEEccCCc----EEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeE
Q psy8006           5 KNIISSIINDMGKYATVRRCRDRKNGT----QYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDM   80 (126)
Q Consensus         5 ~~~~~~~~lg~g~~~~v~~~~~~~~~~----~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~   80 (126)
                      ..|...+.||+|+||.||+|....++.    .+|+|.+..... ......+.+|+.++..++| ||++++++.+.. ...
T Consensus         7 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~aik~~~~~~~-~~~~~~~~~e~~~l~~l~h-~~i~~~~~~~~~-~~~   83 (279)
T cd05057           7 TELEKIKVLGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREETS-PKANKEILDEAYVMASVDH-PHVVRLLGICLS-SQV   83 (279)
T ss_pred             HHcEEcceecCCCCccEEEEEEecCCCCcceEEEEEeccCCCC-HHHHHHHHHHHHHHHhCCC-CCcceEEEEEec-Cce
Confidence            345667899999999999998766654    588998765532 2334468899999999998 999999998876 778


Q ss_pred             EEEEeccCcccHHHHHHhc-CCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          81 ILLLELLTSAVDSKIRESF-GSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        81 ~lv~e~~~~~~L~~~~~~~-~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      ++++||+++++|.+++.+. ..+++..+..++.|++.|++|||+.++
T Consensus        84 ~~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~i  130 (279)
T cd05057          84 QLITQLMPLGCLLDYVRNHKDNIGSQYLLNWCVQIAKGMSYLEEKRL  130 (279)
T ss_pred             EEEEecCCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCE
Confidence            9999999999999888763 468999999999999999999998763

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea

>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor

Probab=99.79  E-value=6.1e-18  Score=110.75  Aligned_cols=119  Identities=16%  Similarity=0.116  Sum_probs=98.2

Q ss_pred             ccccceeeccCccceeEEEEEEccCCc----EEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeE
Q psy8006           5 KNIISSIINDMGKYATVRRCRDRKNGT----QYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDM   80 (126)
Q Consensus         5 ~~~~~~~~lg~g~~~~v~~~~~~~~~~----~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~   80 (126)
                      .+|...+.||+|+||.||+|.+..++.    .+|+|.+..... ....+.+.+|+.++..++| ||++++++.+..+ ..
T Consensus         7 ~~f~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~e~~~l~~l~h-~niv~~~g~~~~~-~~   83 (316)
T cd05108           7 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATS-PKANKEILDEAYVMASVDN-PHVCRLLGICLTS-TV   83 (316)
T ss_pred             hhceeeeeeecCCCceEEEEEEecCCCccceeEEEEeccccCC-HHHHHHHHHHHHHHHhCCC-CCCCeEEEEEcCC-Cc
Confidence            467788999999999999998765555    489999875432 2334568899999999998 9999999988754 46


Q ss_pred             EEEEeccCcccHHHHHHhc-CCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          81 ILLLELLTSAVDSKIRESF-GSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        81 ~lv~e~~~~~~L~~~~~~~-~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      +++++++++|+|.+++... ..++...+..++.|++.|++|||+.++
T Consensus        84 ~~v~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~i  130 (316)
T cd05108          84 QLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEERRL  130 (316)
T ss_pred             eeeeecCCCCCHHHHHHhccccCCHHHHHHHHHHHHHHHHHHHhcCe
Confidence            7899999999998888763 468889999999999999999998763

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor

>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3

Probab=99.79  E-value=5.8e-18  Score=108.43  Aligned_cols=113  Identities=14%  Similarity=0.018  Sum_probs=92.4

Q ss_pred             eeccCccceeEEEEEEc--cCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeEEEEEeccC
Q psy8006          11 IINDMGKYATVRRCRDR--KNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLLELLT   88 (126)
Q Consensus        11 ~~lg~g~~~~v~~~~~~--~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~~lv~e~~~   88 (126)
                      +.||+|+||.||++...  .++..+++|.++.... ......+.+|+.+++.++| ||++++++.+......++||||++
T Consensus         1 ~~lg~G~~g~Vy~~~~~~~~~~~~~~~k~~~~~~~-~~~~~~~~~E~~~l~~l~h-~~iv~~~~~~~~~~~~~lv~e~~~   78 (269)
T cd05087           1 KEIGNGWFGKVILGEVNSGYTPAQVVVKELRVSAS-VQEQMKFLEEAQPYRSLQH-SNLLQCLGQCTEVTPYLLVMEFCP   78 (269)
T ss_pred             CcccccCCceEEEEEEcCCCCceEEEEEecCCCCC-hHHHHHHHHHHHHHHhCCC-CCEeeEEEEEcCCCCcEEEEECCC
Confidence            36899999999999753  4556789998876542 2223358889999999998 999999999988888999999999


Q ss_pred             cccHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHhhhccC
Q psy8006          89 SAVDSKIRESF-----GSKSESGVQNCLEPSISVFSSLSKFE  125 (126)
Q Consensus        89 ~~~L~~~~~~~-----~~~~~~~~~~~~~qi~~~l~~l~~~~  125 (126)
                      +++|.+++...     ..++...+..++.|++.|++|||+.+
T Consensus        79 ~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~  120 (269)
T cd05087          79 LGDLKGYLRSCRKAELMTPDPTTLQRMACEIALGLLHLHKNN  120 (269)
T ss_pred             CCcHHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHCC
Confidence            99998888642     24566778899999999999999875

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells

>KOG0612|consensus

Probab=99.79  E-value=5.8e-20  Score=132.10  Aligned_cols=120  Identities=18%  Similarity=0.190  Sum_probs=107.3

Q ss_pred             ccccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCC-chhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeEEEE
Q psy8006           5 KNIISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRS-TDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILL   83 (126)
Q Consensus         5 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~-~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~~lv   83 (126)
                      .+|..-++||+|+||.|...++++++..||.|++.+..+- ......|..|-++|...++ ++|++++.+|.++.++|+|
T Consensus        75 ~DfeilKvIGrGaFGEV~lVr~k~t~~VYAMK~lnK~eMlKr~~tA~F~EERDimv~~ns-~Wiv~LhyAFQD~~~LYlV  153 (1317)
T KOG0612|consen   75 EDFEILKVIGRGAFGEVALVRHKSTEKVYAMKILNKWEMLKRAETACFREERDIMVFGNS-EWIVQLHYAFQDERYLYLV  153 (1317)
T ss_pred             HhhHHHHHhcccccceeEEEEeeccccchhHHHhhHHHHhhchhHHHHHHHhHHHHcCCc-HHHHHHHHHhcCccceEEE
Confidence            4567788999999999999999999999999999886543 2334457888889988887 9999999999999999999


Q ss_pred             EeccCcccHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhhccC
Q psy8006          84 LELLTSAVDSKIRESFGSKSESGVQNCLEPSISVFSSLSKFE  125 (126)
Q Consensus        84 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~l~~~~  125 (126)
                      |||++||+|..++....++|+.-++++...++.||..||++|
T Consensus       154 MdY~pGGDlltLlSk~~~~pE~~ArFY~aEiVlAldslH~mg  195 (1317)
T KOG0612|consen  154 MDYMPGGDLLTLLSKFDRLPEDWARFYTAEIVLALDSLHSMG  195 (1317)
T ss_pred             EecccCchHHHHHhhcCCChHHHHHHHHHHHHHHHHHHHhcc
Confidence            999999999999988778999999999999999999999987

>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases

Probab=99.79  E-value=1e-17  Score=106.20  Aligned_cols=112  Identities=17%  Similarity=0.150  Sum_probs=97.7

Q ss_pred             eeccCccceeEEEEEEccCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeEEEEEeccCcc
Q psy8006          11 IINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLLELLTSA   90 (126)
Q Consensus        11 ~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~~lv~e~~~~~   90 (126)
                      +.||+|++|.||++.+.. +..+++|.+...... .....+.+|+.++++++| |+++++++.+......++++|+++++
T Consensus         1 ~~lg~g~~g~v~~~~~~~-~~~v~~K~~~~~~~~-~~~~~~~~e~~~l~~l~~-~~i~~~~~~~~~~~~~~~v~e~~~~~   77 (251)
T cd05041           1 EKIGKGNFGDVYKGVLKG-NTEVAVKTCRSTLPP-DLKRKFLQEAEILKQYDH-PNIVKLIGVCVQKQPIYIVMELVPGG   77 (251)
T ss_pred             CccccCCCceEEEEEEeC-CCcEEEEeccccCCH-HHHHHHHHHHHHHHhCCC-CCeEEEEEEEecCCCeEEEEEcCCCC
Confidence            468999999999999877 899999998765443 334568999999999998 99999999999999999999999999


Q ss_pred             cHHHHHHh-cCCCCHHHHHHHHHHHHHHHHhhhccC
Q psy8006          91 VDSKIRES-FGSKSESGVQNCLEPSISVFSSLSKFE  125 (126)
Q Consensus        91 ~L~~~~~~-~~~~~~~~~~~~~~qi~~~l~~l~~~~  125 (126)
                      +|.+++.. ...++...+..++.|++.+++|||+.+
T Consensus        78 ~l~~~l~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~  113 (251)
T cd05041          78 SLLTFLRKKKNRLTVKKLLQMSLDAAAGMEYLESKN  113 (251)
T ss_pred             cHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            99888865 346889999999999999999999875

Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k

>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases

Probab=99.78  E-value=8.3e-18  Score=107.68  Aligned_cols=113  Identities=16%  Similarity=0.038  Sum_probs=91.3

Q ss_pred             eccCccceeEEEEEEc--cCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeEEEEEeccCc
Q psy8006          12 INDMGKYATVRRCRDR--KNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLLELLTS   89 (126)
Q Consensus        12 ~lg~g~~~~v~~~~~~--~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~~lv~e~~~~   89 (126)
                      .||+|+||.||+|...  .....+++|.+.... .......+.+|+.+++.++| |||+++++.+......+++|||+++
T Consensus         2 ~lg~G~fg~v~~~~~~~~~~~~~~~~k~~~~~~-~~~~~~~~~~e~~~~~~l~h-~nii~~~~~~~~~~~~~lv~e~~~~   79 (269)
T cd05042           2 EIGNGWFGKVLLGEAHRGMSKARVVVKELRASA-TPDEQLLFLQEVQPYRELNH-PNVLQCLGQCIESIPYLLVLEFCPL   79 (269)
T ss_pred             cCCccCCceEEEEEEecCCCCeEEEEeecCccC-ChHHHHHHHHHHHHHHhCCC-CCcceEEEEECCCCceEEEEEeCCC
Confidence            5899999999999643  234568888776433 22233458899999999998 9999999999988899999999999


Q ss_pred             ccHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          90 AVDSKIRESFG-----SKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        90 ~~L~~~~~~~~-----~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      ++|.+++....     ..++..+..++.|++.|++|||+.++
T Consensus        80 g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i  121 (269)
T cd05042          80 GDLKNYLRSNRGMVAQMAQKDVLQRMACEVASGLLWLHQADF  121 (269)
T ss_pred             CcHHHHHHhccccccccccHHHHHHHHHHHHHHHHHHHhcCE
Confidence            99999886532     24677888999999999999998763

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina

>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk

Probab=99.78  E-value=1e-17  Score=106.77  Aligned_cols=116  Identities=12%  Similarity=0.097  Sum_probs=97.1

Q ss_pred             ccccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeEEEEE
Q psy8006           5 KNIISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLL   84 (126)
Q Consensus         5 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~~lv~   84 (126)
                      ++|...+.||+|+||.||++... .+..+|+|.+......   ...+.+|+.+++.++| ||++++++.+ ..+..+++|
T Consensus         6 ~~~~~~~~ig~G~~g~v~~~~~~-~~~~~a~K~~~~~~~~---~~~~~~E~~~l~~l~h-~~i~~~~~~~-~~~~~~~v~   79 (260)
T cd05067           6 ETLKLVKKLGAGQFGEVWMGYYN-GHTKVAIKSLKQGSMS---PEAFLAEANLMKQLQH-PRLVRLYAVV-TQEPIYIIT   79 (260)
T ss_pred             HHceeeeeeccCccceEEeeecC-CCceEEEEEecCCCCc---HHHHHHHHHHHHhcCC-cCeeeEEEEE-ccCCcEEEE
Confidence            45667889999999999999864 5678999998765432   3368899999999998 9999999876 455789999


Q ss_pred             eccCcccHHHHHHh--cCCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          85 ELLTSAVDSKIRES--FGSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        85 e~~~~~~L~~~~~~--~~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      |++++++|.+++..  ...++...+..++.|++.|++|||+.++
T Consensus        80 e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~i  123 (260)
T cd05067          80 EYMENGSLVDFLKTPEGIKLTINKLIDMAAQIAEGMAFIERKNY  123 (260)
T ss_pred             EcCCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCe
Confidence            99999999888764  2368899999999999999999998764

Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr

>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases

Probab=99.78  E-value=1e-17  Score=107.55  Aligned_cols=120  Identities=16%  Similarity=0.175  Sum_probs=99.1

Q ss_pred             ccccceeeccCccceeEEEEEEccC-----CcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCe
Q psy8006           5 KNIISSIINDMGKYATVRRCRDRKN-----GTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHD   79 (126)
Q Consensus         5 ~~~~~~~~lg~g~~~~v~~~~~~~~-----~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~   79 (126)
                      ++|...+.||+|+||.||++.....     +..+|+|.+..... ......+.+|+.++..++| ||++++++.+..+..
T Consensus         6 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~-~~~~~~~~~e~~~l~~~~~-~~i~~~~~~~~~~~~   83 (277)
T cd05032           6 EKITLIRELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENAS-MRERIEFLNEASVMKEFNC-HHVVRLLGVVSTGQP   83 (277)
T ss_pred             HHeeEEeEecCCCCceEEEEEEeccCCCCcceeEEEEecCCccC-HHHHHHHHHHHHHHHhCCC-CceeEEEEEEcCCCC
Confidence            4567788999999999999987643     37899999865432 2223468899999999998 999999999999999


Q ss_pred             EEEEEeccCcccHHHHHHhc----------CCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          80 MILLLELLTSAVDSKIRESF----------GSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        80 ~~lv~e~~~~~~L~~~~~~~----------~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      .+++|||+++++|.+++...          ..+++..+..++.|++.|+.|||+.++
T Consensus        84 ~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i  140 (277)
T cd05032          84 TLVVMELMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAAEIADGMAYLAAKKF  140 (277)
T ss_pred             cEEEEecCCCCCHHHHHHhcccchhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCc
Confidence            99999999999999888642          236778899999999999999998764

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological

>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor

Probab=99.78  E-value=1.1e-17  Score=107.61  Aligned_cols=121  Identities=17%  Similarity=0.180  Sum_probs=98.4

Q ss_pred             cccccceeeccCccceeEEEEEEcc-----CCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCC
Q psy8006           4 IKNIISSIINDMGKYATVRRCRDRK-----NGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSH   78 (126)
Q Consensus         4 ~~~~~~~~~lg~g~~~~v~~~~~~~-----~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~   78 (126)
                      .++|...+.+|+|++|.||.+.+..     ++..+|+|.+..... ......+.+|+.+++.++| ||++++++.+....
T Consensus         5 ~~~~~~~~~ig~G~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~-~~~~~~~~~e~~~l~~l~~-~~iv~~~~~~~~~~   82 (277)
T cd05062           5 REKITMSRELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEAAS-MRERIEFLNEASVMKEFNC-HHVVRLLGVVSQGQ   82 (277)
T ss_pred             HHHceeeeeeccccCCeEEEEEeccCCCCCceeEEEEEeccccCC-HHHHHHHHHHHHHHHhCCC-CCeeeEEEEEcCCC
Confidence            3567778899999999999987642     346799998865432 2234468899999999998 99999999998888


Q ss_pred             eEEEEEeccCcccHHHHHHhcC----------CCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          79 DMILLLELLTSAVDSKIRESFG----------SKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        79 ~~~lv~e~~~~~~L~~~~~~~~----------~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      ..+++|||+++++|.+++....          .++...+..++.|++.|++|||+.++
T Consensus        83 ~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~  140 (277)
T cd05062          83 PTLVIMELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADGMAYLNANKF  140 (277)
T ss_pred             CeEEEEecCCCCCHHHHHHHcCccccccccccCCCHHHHHHHHHHHHHHHHHHHHCCc
Confidence            9999999999999998886421          35677889999999999999998763

Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh

>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional

Probab=99.78  E-value=1.3e-17  Score=106.91  Aligned_cols=107  Identities=15%  Similarity=0.221  Sum_probs=89.3

Q ss_pred             ccCccceeEEEEEEccCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeEEEEEeccCcccH
Q psy8006          13 NDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLLELLTSAVD   92 (126)
Q Consensus        13 lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~~lv~e~~~~~~L   92 (126)
                      +|+|+||.||.+.+..++..+++|.+.......       .|+.....+.+|||++++++.+..++..++||||+++++|
T Consensus        24 lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~-------~e~~~~~~~~~h~~iv~~~~~~~~~~~~~iv~e~~~~~~L   96 (267)
T PHA03390         24 LIDGKFGKVSVLKHKPTQKLFVQKIIKAKNFNA-------IEPMVHQLMKDNPNFIKLYYSVTTLKGHVLIMDYIKDGDL   96 (267)
T ss_pred             ecCCCceEEEEEEEcCCCcEEEEEEEehhhcch-------hhHHHHHHhhcCCCEEEEEEEEecCCeeEEEEEcCCCCcH
Confidence            699999999999999999999999987653321       1222222232349999999999999999999999999999


Q ss_pred             HHHHHhcCCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          93 SKIRESFGSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        93 ~~~~~~~~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      .++++.+..+++..+..++.|++.|++|||+.++
T Consensus        97 ~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i  130 (267)
T PHA03390         97 FDLLKKEGKLSEAEVKKIIRQLVEALNDLHKHNI  130 (267)
T ss_pred             HHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCe
Confidence            9999877789999999999999999999998763

>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase

Probab=99.78  E-value=1.2e-17  Score=110.81  Aligned_cols=118  Identities=16%  Similarity=0.159  Sum_probs=98.0

Q ss_pred             ccccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeC------C
Q psy8006           5 KNIISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESS------H   78 (126)
Q Consensus         5 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~------~   78 (126)
                      ..|...+.||+|+||.||.+.+..++..+|+|.+............+.+|+.+++.++| ||++++++.+...      .
T Consensus        16 ~~y~~~~~lg~g~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h-~~iv~~~~~~~~~~~~~~~~   94 (353)
T cd07850          16 KRYQNLKPIGSGAQGIVCAAYDTVTGQNVAIKKLSRPFQNVTHAKRAYRELVLMKLVNH-KNIIGLLNVFTPQKSLEEFQ   94 (353)
T ss_pred             cceEEEEEeccCCCEEEEEEEECCCCCEEEEEecCccccChhHHHHHHHHHHHHHhcCC-CCCcceeeeeccCCCccccC
Confidence            44677889999999999999999999999999987654433444567789999999998 9999999987543      3


Q ss_pred             eEEEEEeccCcccHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          79 DMILLLELLTSAVDSKIRESFGSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        79 ~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      ..|+|+||++++ |.+.+...  +++..+..++.|++.|++|||..++
T Consensus        95 ~~~lv~e~~~~~-l~~~~~~~--l~~~~~~~~~~ql~~aL~~LH~~gi  139 (353)
T cd07850          95 DVYLVMELMDAN-LCQVIQMD--LDHERMSYLLYQMLCGIKHLHSAGI  139 (353)
T ss_pred             cEEEEEeccCCC-HHHHHhhc--CCHHHHHHHHHHHHHHHHHHHhCCe
Confidence            579999999875 77766643  8999999999999999999998763

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK

>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase

Probab=99.78  E-value=2.2e-17  Score=106.70  Aligned_cols=116  Identities=15%  Similarity=0.216  Sum_probs=100.8

Q ss_pred             ccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeEEEEEec
Q psy8006           7 IISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLLEL   86 (126)
Q Consensus         7 ~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~~lv~e~   86 (126)
                      +..-+.||+|++|.||++.+..++..+++|.+....  ......+.+|+.+++.++| ||++++++.+..++..++++||
T Consensus        21 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~--~~~~~~~~~e~~~l~~~~h-~~vv~~~~~~~~~~~~~~v~e~   97 (285)
T cd06648          21 LDNFVKIGEGSTGIVCIATDKSTGRQVAVKKMDLRK--QQRRELLFNEVVIMRDYQH-PNIVEMYSSYLVGDELWVVMEF   97 (285)
T ss_pred             hhcceEeccCCCeEEEEEEECCCCCEEEEEEEeccc--hhHHHHHHHHHHHHHHcCC-CChheEEEEEEcCCeEEEEEec
Confidence            445679999999999999998889999999886432  2223458899999999998 9999999999989999999999


Q ss_pred             cCcccHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          87 LTSAVDSKIRESFGSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        87 ~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      +++++|.+++.. ..+++..+..++.|++.++++||+.++
T Consensus        98 ~~~~~L~~~~~~-~~~~~~~~~~~~~ql~~~l~~lH~~~i  136 (285)
T cd06648          98 LEGGALTDIVTH-TRMNEEQIATVCLAVLKALSFLHAQGV  136 (285)
T ss_pred             cCCCCHHHHHHh-CCCCHHHHHHHHHHHHHHHHHHHhCCe
Confidence            999999988876 568999999999999999999998764

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun

>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3

Probab=99.78  E-value=2.8e-17  Score=107.60  Aligned_cols=118  Identities=14%  Similarity=0.175  Sum_probs=98.5

Q ss_pred             ccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCc-hhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeEEEEEe
Q psy8006           7 IISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRST-DLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLLE   85 (126)
Q Consensus         7 ~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~-~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~~lv~e   85 (126)
                      |.....+|+|+||.||++.+..++..+++|.+....... .....+.+|+.+++.++| ||++++.+.+......|++||
T Consensus        23 ~~~~~~lg~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~E~~~l~~l~h-~~iv~~~~~~~~~~~~~lv~e  101 (313)
T cd06633          23 FVGLHEIGHGSFGAVYFATNSHTNEVVAVKKMSYSGKQTNEKWQDIIKEVKFLQQLKH-PNTIEYKGCYLKEHTAWLVME  101 (313)
T ss_pred             hhcceeeccCCCeEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHHhCCC-CCCccEEEEEEeCCEEEEEEe
Confidence            334567999999999999998899999999997654322 233468889999999998 999999999999999999999


Q ss_pred             ccCcccHHHHHH-hcCCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          86 LLTSAVDSKIRE-SFGSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        86 ~~~~~~L~~~~~-~~~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      |+.++ +.+++. ....+++..+..++.|++.++.|||+.++
T Consensus       102 ~~~~~-l~~~l~~~~~~l~~~~~~~~~~qi~~al~~LH~~gi  142 (313)
T cd06633         102 YCLGS-ASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSHNM  142 (313)
T ss_pred             cCCCC-HHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence            99765 655554 34578999999999999999999998764

Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co

>KOG0201|consensus

Probab=99.78  E-value=6.5e-20  Score=120.87  Aligned_cols=117  Identities=15%  Similarity=0.168  Sum_probs=105.4

Q ss_pred             ccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeEEEEEec
Q psy8006           7 IISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLLEL   86 (126)
Q Consensus         7 ~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~~lv~e~   86 (126)
                      |...+.||+|+||.||+|.+..+++.+|+|+++...... ......+|+.++.++++ +||.++|+.+..+..+|++|||
T Consensus        15 ~~~~~~IgrGsfG~Vyk~~d~~t~k~vAiKii~Le~~~d-eIediqqei~~Ls~~~~-~~it~yygsyl~g~~LwiiMey   92 (467)
T KOG0201|consen   15 YTKLELIGRGSFGEVYKAIDNKTKKVVAIKIIDLEEAED-EIEDIQQEISVLSQCDS-PNITEYYGSYLKGTKLWIIMEY   92 (467)
T ss_pred             cccchhccccccceeeeeeeccccceEEEEEechhhcch-hhHHHHHHHHHHHhcCc-chHHhhhhheeecccHHHHHHH
Confidence            445688999999999999999999999999999876533 23468899999999999 9999999999999999999999


Q ss_pred             cCcccHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhhccC
Q psy8006          87 LTSAVDSKIRESFGSKSESGVQNCLEPSISVFSSLSKFE  125 (126)
Q Consensus        87 ~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~l~~~~  125 (126)
                      +.+|++.++++....+.+..+..++++++.|+.|||...
T Consensus        93 ~~gGsv~~lL~~~~~~~E~~i~~ilre~l~~l~ylH~~~  131 (467)
T KOG0201|consen   93 CGGGSVLDLLKSGNILDEFEIAVILREVLKGLDYLHSEK  131 (467)
T ss_pred             hcCcchhhhhccCCCCccceeeeehHHHHHHhhhhhhcc
Confidence            999999999998777799999999999999999999753

>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase

Probab=99.78  E-value=1.6e-17  Score=106.86  Aligned_cols=116  Identities=18%  Similarity=0.247  Sum_probs=95.0

Q ss_pred             ceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeC--CeEEEEEec
Q psy8006           9 SSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESS--HDMILLLEL   86 (126)
Q Consensus         9 ~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~--~~~~lv~e~   86 (126)
                      ..+.+|+|+||.||++.+..++..+|+|.+.....+.. .....+|+..+.++..|||++++++.+..+  +..++++||
T Consensus         3 ~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~-~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~lv~e~   81 (282)
T cd07831           3 ILGKIGEGTFSEVLKAQSRKTGKYYAIKCMKKHFKSLE-QVNNLREIQALRRLSPHPNILRLIEVLFDRKTGRLALVFEL   81 (282)
T ss_pred             eEeeccccccceEEEEEEcCCCcEEEEEEehhccCCch-hhhHHHHHHHHhhcCCCCCccceEEEEecCCCCcEEEEEec
Confidence            45679999999999999999999999999876533222 223557888898887449999999999877  789999999


Q ss_pred             cCcccHHHHHHh-cCCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          87 LTSAVDSKIRES-FGSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        87 ~~~~~L~~~~~~-~~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      ++++ +.+.+.. ...+++..+..++.|++.|++|||+.++
T Consensus        82 ~~~~-l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~i  121 (282)
T cd07831          82 MDMN-LYELIKGRKRPLPEKRVKSYMYQLLKSLDHMHRNGI  121 (282)
T ss_pred             CCcc-HHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCc
Confidence            9865 6666654 4578999999999999999999998764

Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.

>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5

Probab=99.78  E-value=5.1e-18  Score=110.08  Aligned_cols=116  Identities=15%  Similarity=0.218  Sum_probs=99.9

Q ss_pred             ccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeEEEEEec
Q psy8006           7 IISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLLEL   86 (126)
Q Consensus         7 ~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~~lv~e~   86 (126)
                      +.....||+|+||.||.+.+..++..+|+|.+....  ......+.+|+..+..++| ||++++++.+..++..+++|||
T Consensus        24 ~~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~e~~~l~~l~h-~~ii~~~~~~~~~~~~~lv~e~  100 (292)
T cd06658          24 LDSFIKIGEGSTGIVCIATEKHTGKQVAVKKMDLRK--QQRRELLFNEVVIMRDYHH-ENVVDMYNSYLVGDELWVVMEF  100 (292)
T ss_pred             HhhhhcccCCCCeEEEEEEECCCCCEEEEEEEecch--HHHHHHHHHHHHHHHhCCC-CcHHHHHHheecCCeEEEEEeC
Confidence            444567999999999999998889999999986532  2233458899999999998 9999999999999999999999


Q ss_pred             cCcccHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          87 LTSAVDSKIRESFGSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        87 ~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      +++++|.+++.. ..+++..+..++.|++.+++|||+.++
T Consensus       101 ~~~~~L~~~~~~-~~l~~~~~~~~~~qi~~~l~~LH~~~i  139 (292)
T cd06658         101 LEGGALTDIVTH-TRMNEEQIATVCLSVLRALSYLHNQGV  139 (292)
T ss_pred             CCCCcHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCE
Confidence            999999888754 468999999999999999999998764

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express

>KOG0196|consensus

Probab=99.78  E-value=1e-18  Score=122.23  Aligned_cols=117  Identities=16%  Similarity=0.201  Sum_probs=102.8

Q ss_pred             ccceeeccCccceeEEEEEEccCCc---EEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeEEEE
Q psy8006           7 IISSIINDMGKYATVRRCRDRKNGT---QYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILL   83 (126)
Q Consensus         7 ~~~~~~lg~g~~~~v~~~~~~~~~~---~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~~lv   83 (126)
                      +..+++||.|.||.|+.|..+..++   .||||.++.... ++.+..|+.|..+|.+.+| |||++|.+.+......+|+
T Consensus       631 i~Ie~VIGaGEFGEVc~GrLk~pgkre~~VAIKTLK~Gyt-ekqrrdFL~EAsIMGQFdH-PNIIrLEGVVTks~PvMIi  708 (996)
T KOG0196|consen  631 VKIEKVIGAGEFGEVCSGRLKLPGKREITVAIKTLKAGYT-EKQRRDFLSEASIMGQFDH-PNIIRLEGVVTKSKPVMII  708 (996)
T ss_pred             eEEEEEEecccccceecccccCCCCcceeEEEeeeccCcc-HHHHhhhhhhhhhcccCCC-CcEEEEEEEEecCceeEEE
Confidence            4568899999999999998765553   799999986543 3445569999999999999 9999999999999999999


Q ss_pred             EeccCcccHHHHHHh-cCCCCHHHHHHHHHHHHHHHHhhhccC
Q psy8006          84 LELLTSAVDSKIRES-FGSKSESGVQNCLEPSISVFSSLSKFE  125 (126)
Q Consensus        84 ~e~~~~~~L~~~~~~-~~~~~~~~~~~~~~qi~~~l~~l~~~~  125 (126)
                      .|||++|+|..+++. ++.|+.-+...+++.|++++.||.+|+
T Consensus       709 TEyMENGsLDsFLR~~DGqftviQLVgMLrGIAsGMkYLsdm~  751 (996)
T KOG0196|consen  709 TEYMENGSLDSFLRQNDGQFTVIQLVGMLRGIASGMKYLSDMN  751 (996)
T ss_pred             hhhhhCCcHHHHHhhcCCceEeehHHHHHHHHHHHhHHHhhcC
Confidence            999999999999875 468999999999999999999999885

>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6

Probab=99.78  E-value=7.2e-18  Score=109.61  Aligned_cols=114  Identities=16%  Similarity=0.282  Sum_probs=98.8

Q ss_pred             ceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeEEEEEeccC
Q psy8006           9 SSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLLELLT   88 (126)
Q Consensus         9 ~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~~lv~e~~~   88 (126)
                      ....||+|+||.||.+.+..++..+|+|.+.....  .....+.+|+.++..++| ||++++++.+..++..++++||++
T Consensus        25 ~~~~ig~g~~g~v~~~~~~~~~~~v~iK~~~~~~~--~~~~~~~~e~~~l~~l~h-p~i~~~~~~~~~~~~~~iv~e~~~  101 (297)
T cd06659          25 NYIKIGEGSTGIVCIAREKHSGRQVAVKMMDLRKQ--QRRELLFNEVVIMRDYQH-QNVVEMYKSYLVGEELWVLMEFLQ  101 (297)
T ss_pred             hhhhcCCCCceeEEEEEEcCCCCEEEEEEEEeccc--chHHHHHHHHHHHHhCCC-CchhhhhhheeeCCeEEEEEecCC
Confidence            34579999999999999988899999999875432  223458899999999998 999999999999999999999999


Q ss_pred             cccHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          89 SAVDSKIRESFGSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        89 ~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      +++|..++.. ..+++..+..++.|++.|++|||+.++
T Consensus       102 ~~~L~~~~~~-~~~~~~~~~~~~~qi~~~L~~LH~~~i  138 (297)
T cd06659         102 GGALTDIVSQ-TRLNEEQIATVCESVLQALCYLHSQGV  138 (297)
T ss_pred             CCCHHHHHhh-cCCCHHHHHHHHHHHHHHHHHHHhCCe
Confidence            9999887765 468999999999999999999998763

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i

>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors

Probab=99.78  E-value=1.2e-17  Score=108.14  Aligned_cols=120  Identities=9%  Similarity=0.098  Sum_probs=99.1

Q ss_pred             ccccceeeccCccceeEEEEEEccC-----CcEEEEEEeecCCCCchhHHHHHHHHHHHHHh-cCCCCceeeeeeeEeCC
Q psy8006           5 KNIISSIINDMGKYATVRRCRDRKN-----GTQYAAKFLRKKRRSTDLKAEILHEVAVLEAC-RCNSRIVQLHQVFESSH   78 (126)
Q Consensus         5 ~~~~~~~~lg~g~~~~v~~~~~~~~-----~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~-~~~~~iv~l~~~~~~~~   78 (126)
                      ++|...+.||+|++|.||++.....     ...+|+|.+..... ......+.+|+.++..+ +| ||++++++.+..++
T Consensus        12 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~~a~k~~~~~~~-~~~~~~~~~E~~~l~~l~~h-~~i~~~~~~~~~~~   89 (293)
T cd05053          12 DRLTLGKPLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDAT-EKDLSDLVSEMEMMKMIGKH-KNIINLLGVCTQEG   89 (293)
T ss_pred             hHeEEeeEecccccccEEEEEEecCCCCCCceeEEEEEccCCCC-HHHHHHHHHHHHHHHhhcCC-CCeeeEEEEEcCCC
Confidence            3466678999999999999987543     36789998875432 23344688999999999 56 99999999999888


Q ss_pred             eEEEEEeccCcccHHHHHHh----------------cCCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          79 DMILLLELLTSAVDSKIRES----------------FGSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        79 ~~~lv~e~~~~~~L~~~~~~----------------~~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      ..+++|||+++++|..++..                ...+++..+..++.|++.|++|||+.++
T Consensus        90 ~~~li~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~i  153 (293)
T cd05053          90 PLYVVVEYAAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKDLVSFAYQVARGMEFLASKKC  153 (293)
T ss_pred             CeEEEEEeCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHCCc
Confidence            99999999999999888853                2368899999999999999999998764

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,

>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1

Probab=99.78  E-value=1.8e-17  Score=109.22  Aligned_cols=119  Identities=20%  Similarity=0.222  Sum_probs=99.6

Q ss_pred             ccccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEe-CCeEEEE
Q psy8006           5 KNIISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFES-SHDMILL   83 (126)
Q Consensus         5 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~-~~~~~lv   83 (126)
                      ++|...+.||+|+||.||++.+..++..+|+|.+............+.+|+.++..++| ||++++.+.+.. ....+++
T Consensus        10 ~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h-pniv~~~~~~~~~~~~~~lv   88 (328)
T cd07856          10 NRYVDLQPVGMGAFGLVCSARDQLTGQNVAIKKIMKPFSTPVLAKRTYRELKLLKHLRH-ENIISLSDIFISPLEDIYFV   88 (328)
T ss_pred             cceEEEEeecccCCeEEEEEEECCCCCEEEEEEecccccccchhHHHHHHHHHHHhcCC-CCeeeEeeeEecCCCcEEEE
Confidence            45777889999999999999999999999999987654333334567889999999998 999999998865 4578999


Q ss_pred             EeccCcccHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          84 LELLTSAVDSKIRESFGSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        84 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      +|++.+ +|.++++. ..+++..+..++.|+++|++|||+.++
T Consensus        89 ~e~~~~-~L~~~~~~-~~~~~~~~~~~~~ql~~aL~~LH~~~i  129 (328)
T cd07856          89 TELLGT-DLHRLLTS-RPLEKQFIQYFLYQILRGLKYVHSAGV  129 (328)
T ss_pred             eehhcc-CHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCc
Confidence            999855 58777764 458888899999999999999999864

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U

>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin

Probab=99.78  E-value=2.3e-17  Score=106.72  Aligned_cols=120  Identities=18%  Similarity=0.197  Sum_probs=99.5

Q ss_pred             cccccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeC-----C
Q psy8006           4 IKNIISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESS-----H   78 (126)
Q Consensus         4 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~-----~   78 (126)
                      .++|...+.||+|+||.||++.+..++..+|+|.+.....   ....+.+|+.++.++..|||++++++.+...     +
T Consensus        21 ~~~y~~~~~l~~g~~~~vy~~~~~~~~~~~aik~~~~~~~---~~~~~~~e~~~l~~l~~h~ni~~~~~~~~~~~~~~~~   97 (291)
T cd06639          21 TDTWEIIETIGKGTYGKVYKVTNKKDGSLAAVKILDPISD---VDEEIEAEYNILQSLPNHPNVVKFYGMFYKADKLVGG   97 (291)
T ss_pred             CCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEeccccc---HHHHHHHHHHHHHHhcCCCCeEEEEEEEEeccccCCC
Confidence            4567788899999999999999999999999999865421   2335778999999984349999999988643     3


Q ss_pred             eEEEEEeccCcccHHHHHHh----cCCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          79 DMILLLELLTSAVDSKIRES----FGSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        79 ~~~lv~e~~~~~~L~~~~~~----~~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      ..++++||+++++|.++++.    ...+++..+..++.|++.|++|||+.++
T Consensus        98 ~~~lv~ey~~~~sL~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i  149 (291)
T cd06639          98 QLWLVLELCNGGSVTELVKGLLICGQRLDEAMISYILYGALLGLQHLHNNRI  149 (291)
T ss_pred             eeEEEEEECCCCcHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhCCe
Confidence            58999999999999887752    3468999999999999999999998764

Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre

>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa

Probab=99.78  E-value=1.3e-17  Score=106.31  Aligned_cols=112  Identities=16%  Similarity=0.219  Sum_probs=92.9

Q ss_pred             eccCccceeEEEEEEc--cCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeEEEEEeccCc
Q psy8006          12 INDMGKYATVRRCRDR--KNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLLELLTS   89 (126)
Q Consensus        12 ~lg~g~~~~v~~~~~~--~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~~lv~e~~~~   89 (126)
                      .||+|+||.||.|...  ..+..+|+|.+.... .......+.+|+.++++++| ||++++++.+. ....++||||+++
T Consensus         2 ~ig~G~~g~v~~~~~~~~~~~~~vavk~~~~~~-~~~~~~~~~~E~~~l~~l~h-~~ii~~~~~~~-~~~~~lv~e~~~~   78 (257)
T cd05115           2 ELGSGNFGCVKKGVYKMRKKQIDVAIKVLKNEN-EKSVRDEMMREAEIMHQLDN-PYIVRMIGVCE-AEALMLVMEMASG   78 (257)
T ss_pred             ccCCCCcccEEEEEEecCCCceeEEEEEccccc-ChHHHHHHHHHHHHHHhcCC-CCeEEEEEEEc-CCCeEEEEEeCCC
Confidence            4899999999998764  445579999887553 23334568999999999998 99999999875 4568999999999


Q ss_pred             ccHHHHHHh-cCCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          90 AVDSKIRES-FGSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        90 ~~L~~~~~~-~~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      ++|.+++.. ...+++..+..++.|++.|+.|||+.++
T Consensus        79 ~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i  116 (257)
T cd05115          79 GPLNKFLSGKKDEITVSNVVELMHQVSMGMKYLEGKNF  116 (257)
T ss_pred             CCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhcCe
Confidence            999988864 4578999999999999999999998763

Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho

>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer

Probab=99.78  E-value=1.6e-17  Score=105.25  Aligned_cols=113  Identities=15%  Similarity=0.152  Sum_probs=95.9

Q ss_pred             eeccCccceeEEEEEEccCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeEEEEEeccCcc
Q psy8006          11 IINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLLELLTSA   90 (126)
Q Consensus        11 ~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~~lv~e~~~~~   90 (126)
                      ++||+|+||.||++... ++..+|+|.+..... ......+.+|+.++..++| ||++++++.+...+..+++|||++++
T Consensus         1 ~~ig~g~~g~vy~~~~~-~~~~~a~K~~~~~~~-~~~~~~~~~e~~~l~~l~h-~~i~~~~~~~~~~~~~~lv~e~~~~~   77 (250)
T cd05085           1 ELLGKGNFGEVFKGTLK-DKTPVAVKTCKEDLP-QELKIKFLSEARILKQYDH-PNIVKLIGVCTQRQPIYIVMELVPGG   77 (250)
T ss_pred             CccCCCCCceEEEEEec-CCcEEEEEecCCcCC-HHHHHHHHHHHHHHHhCCC-CCcCeEEEEEecCCccEEEEECCCCC
Confidence            36899999999999854 678899998875432 2333458899999999998 99999999999888999999999999


Q ss_pred             cHHHHHHh-cCCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          91 VDSKIRES-FGSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        91 ~L~~~~~~-~~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      +|.+++.. ...+++..+..++.|++.++.|||+.++
T Consensus        78 ~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~~  114 (250)
T cd05085          78 DFLSFLRKKKDELKTKQLVKFALDAAAGMAYLESKNC  114 (250)
T ss_pred             cHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCe
Confidence            99888765 3468899999999999999999998763

Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c

>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src

Probab=99.78  E-value=1.1e-17  Score=106.96  Aligned_cols=116  Identities=15%  Similarity=0.125  Sum_probs=96.6

Q ss_pred             ccccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeEEEEE
Q psy8006           5 KNIISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLL   84 (126)
Q Consensus         5 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~~lv~   84 (126)
                      .+|...+.||+|++|.||++.+..+ ..+|+|.+......   ...+.+|+.++..++| ||++++++.+. ....+++|
T Consensus         6 ~~~~~~~~lg~g~~~~v~~~~~~~~-~~valK~~~~~~~~---~~~~~~E~~~l~~l~~-~~i~~~~~~~~-~~~~~lv~   79 (262)
T cd05071           6 ESLRLEVKLGQGCFGEVWMGTWNGT-TRVAIKTLKPGTMS---PEAFLQEAQVMKKLRH-EKLVQLYAVVS-EEPIYIVT   79 (262)
T ss_pred             HHeeEeeecCCCCCCcEEEEEecCC-ceEEEEecccCccC---HHHHHHHHHHHHhCCC-CCcceEEEEEC-CCCcEEEE
Confidence            4577788999999999999987655 45999998764432   2368899999999998 99999998764 45689999


Q ss_pred             eccCcccHHHHHHhc--CCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          85 ELLTSAVDSKIRESF--GSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        85 e~~~~~~L~~~~~~~--~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      ||+++++|.+++...  ..++...+..++.|++.|++|||+.++
T Consensus        80 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~i  123 (262)
T cd05071          80 EYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNY  123 (262)
T ss_pred             EcCCCCcHHHHHhhccccCCCHHHHHHHHHHHHHHHHHHHHCCc
Confidence            999999999888753  357889999999999999999998764

Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo

>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases

Probab=99.78  E-value=3.4e-17  Score=103.34  Aligned_cols=117  Identities=15%  Similarity=0.280  Sum_probs=103.2

Q ss_pred             ccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeEEEEEec
Q psy8006           7 IISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLLEL   86 (126)
Q Consensus         7 ~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~~lv~e~   86 (126)
                      |...+.+|+|++|.||++.+..++..+++|.+.....  .....+.+|+..+..++| ++++++.+.+..+...++++|+
T Consensus         2 y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~--~~~~~~~~e~~~l~~l~~-~~i~~~~~~~~~~~~~~l~~e~   78 (253)
T cd05122           2 FEILEKIGKGGFGEVYKARHKRTGKEVAIKVIKLESK--EKKEKIINEIQILKKCKH-PNIVKYYGSYLKKDELWIVMEF   78 (253)
T ss_pred             ceeeeeeccCCceEEEEEEECCCCcEEEEEEecccch--hHHHHHHHHHHHHHhCCC-CCEeEEEEEEecCCeEEEEEec
Confidence            4556789999999999999998899999999986543  234468899999999998 9999999999999999999999


Q ss_pred             cCcccHHHHHHhc-CCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          87 LTSAVDSKIRESF-GSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        87 ~~~~~L~~~~~~~-~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      +++++|.+++... ..+++..+..++.|++.++++||+.++
T Consensus        79 ~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~i  119 (253)
T cd05122          79 CSGGSLKDLLKSTNQTLTESQIAYVCKELLKGLEYLHSNGI  119 (253)
T ss_pred             CCCCcHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhcCCE
Confidence            9999999888765 579999999999999999999998763

Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core

>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4

Probab=99.78  E-value=1.6e-17  Score=107.81  Aligned_cols=113  Identities=13%  Similarity=0.193  Sum_probs=98.3

Q ss_pred             eeeccCccceeEEEEEEccCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeEEEEEeccCc
Q psy8006          10 SIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLLELLTS   89 (126)
Q Consensus        10 ~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~~lv~e~~~~   89 (126)
                      -..||+|+||.||++....++..+|+|.+....  ......+.+|+.+++.++| +|++++++.+..++..+++|||+++
T Consensus        25 ~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~--~~~~~~~~~e~~~l~~l~h-~~iv~~~~~~~~~~~~~lv~e~~~~  101 (292)
T cd06657          25 FIKIGEGSTGIVCIATVKSSGKLVAVKKMDLRK--QQRRELLFNEVVIMRDYQH-ENVVEMYNSYLVGDELWVVMEFLEG  101 (292)
T ss_pred             HHHcCCCCCeEEEEEEEcCCCeEEEEEEecccc--hhHHHHHHHHHHHHHhcCC-cchhheeeEEEeCCEEEEEEecCCC
Confidence            357999999999999999999999999886432  2234458899999999998 9999999999999999999999999


Q ss_pred             ccHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          90 AVDSKIRESFGSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        90 ~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      ++|.+++.. ..+++..+..++.|++.+++|||+.++
T Consensus       102 ~~L~~~~~~-~~~~~~~~~~~~~ql~~~l~~lH~~gi  137 (292)
T cd06657         102 GALTDIVTH-TRMNEEQIAAVCLAVLKALSVLHAQGV  137 (292)
T ss_pred             CcHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence            999887754 468999999999999999999998764

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo

>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase

Probab=99.78  E-value=4.5e-18  Score=111.81  Aligned_cols=118  Identities=19%  Similarity=0.189  Sum_probs=101.8

Q ss_pred             ccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCC-----eEE
Q psy8006           7 IISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSH-----DMI   81 (126)
Q Consensus         7 ~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~-----~~~   81 (126)
                      |...+.||+|++|.||++.+..++..+++|.+..........+.+.+|+.+++.++| ||++++.+.+....     ..|
T Consensus         2 y~i~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~-~~i~~~~~~~~~~~~~~~~~~~   80 (330)
T cd07834           2 YELLKPIGSGAYGVVCSAVDKRTGRKVAIKKISNVFDDLIDAKRILREIKLLRHLRH-ENIIGLLDILRPPSPEDFNDVY   80 (330)
T ss_pred             ceeeeeecCCCCeEEEEEEeCCCCcEEEEEeeccccccchhhhhHHHHHHHHHhcCC-cchhhhhhhhcccCcccccceE
Confidence            556788999999999999998889999999998654333344568899999999998 99999999887664     789


Q ss_pred             EEEeccCcccHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          82 LLLELLTSAVDSKIRESFGSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        82 lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      ++|||+++ +|.+++.++..+++..+..++.|++.|+++||..++
T Consensus        81 lv~e~~~~-~l~~~l~~~~~l~~~~~~~i~~~l~~~l~~LH~~gi  124 (330)
T cd07834          81 IVTELMET-DLHKVIKSPQPLTDDHIQYFLYQILRGLKYLHSANV  124 (330)
T ss_pred             EEecchhh-hHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCe
Confidence            99999986 588888877789999999999999999999998764

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and

>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C

Probab=99.78  E-value=1.1e-17  Score=108.31  Aligned_cols=120  Identities=16%  Similarity=0.143  Sum_probs=99.2

Q ss_pred             cccccceeeccCccceeEEEEEEc-----cCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCC
Q psy8006           4 IKNIISSIINDMGKYATVRRCRDR-----KNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSH   78 (126)
Q Consensus         4 ~~~~~~~~~lg~g~~~~v~~~~~~-----~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~   78 (126)
                      ..+|...+.||+|+||.||.+...     .++..+++|.+....  ......+.+|+.++.+++| ||++++++.+....
T Consensus         4 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~--~~~~~~~~~e~~~l~~l~h-~~i~~~~~~~~~~~   80 (291)
T cd05094           4 RRDIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPT--LAARKDFQREAELLTNLQH-EHIVKFYGVCGDGD   80 (291)
T ss_pred             hHHeEEeeeecccCCCeEEEeEeeccCCCCcceeeEEEecCCcc--HHHHHHHHHHHHHHhcCCC-CCcceEEEEEccCC
Confidence            345777889999999999999854     344568888876433  2223468899999999998 99999999999889


Q ss_pred             eEEEEEeccCcccHHHHHHhc----------------CCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          79 DMILLLELLTSAVDSKIRESF----------------GSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        79 ~~~lv~e~~~~~~L~~~~~~~----------------~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      ..++||||+++++|.+++...                ..+++..++.++.|++.|++|||+.++
T Consensus        81 ~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i  144 (291)
T cd05094          81 PLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLASQHF  144 (291)
T ss_pred             ceEEEEecCCCCcHHHHHHhcCcccccccccccccCcCCCCHHHHHHHHHHHHHHHHHHHhCCe
Confidence            999999999999999988643                237889999999999999999998764

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n

>KOG1095|consensus

Probab=99.78  E-value=4.2e-18  Score=122.87  Aligned_cols=119  Identities=17%  Similarity=0.097  Sum_probs=100.5

Q ss_pred             ccccceeeccCccceeEEEEEEccCCc-----EEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCe
Q psy8006           5 KNIISSIINDMGKYATVRRCRDRKNGT-----QYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHD   79 (126)
Q Consensus         5 ~~~~~~~~lg~g~~~~v~~~~~~~~~~-----~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~   79 (126)
                      .+....+.||+|+||.||.|.......     .||+|.+.+... ......|++|..+|.+.+| |||+++.+++.+...
T Consensus       692 ~~v~l~~~lG~G~FG~VY~g~~~~~~~~~~~~~vaiK~l~~~~~-~~~~~~Fl~Ea~~m~~f~H-pNiv~liGv~l~~~~  769 (1025)
T KOG1095|consen  692 KNVTLLRVLGKGAFGEVYEGTYSDVPGSVSPIQVAVKSLKRLSS-EQEVSDFLKEALLMSKFDH-PNIVSLIGVCLDSGP  769 (1025)
T ss_pred             hheEeeeeeccccccceEEEEEecCCCCccceEEEEEeccccCC-HHHHHHHHHHHHHHhcCCC-cceeeEEEeecCCCC
Confidence            345567899999999999998653322     488998876542 3345579999999999999 999999999999999


Q ss_pred             EEEEEeccCcccHHHHHHhc-------CCCCHHHHHHHHHHHHHHHHhhhccC
Q psy8006          80 MILLLELLTSAVDSKIRESF-------GSKSESGVQNCLEPSISVFSSLSKFE  125 (126)
Q Consensus        80 ~~lv~e~~~~~~L~~~~~~~-------~~~~~~~~~~~~~qi~~~l~~l~~~~  125 (126)
                      .+|++|||++|+|..++++.       ..++..+...++.|++.+++||+++.
T Consensus       770 ~~i~leyM~gGDL~sflr~~r~~~~~~~~L~~~dLl~~a~dvA~G~~YLe~~~  822 (1025)
T KOG1095|consen  770 PLILLEYMEGGDLLSFLRESRPAPFQPSNLSMRDLLAFALDVAKGMNYLESKH  822 (1025)
T ss_pred             cEEEehhcccCcHHHHHHhcccccCCCCCCCHHHHHHHHHHHhhhhHHHHhCC
Confidence            99999999999999999864       25889999999999999999999863

>PHA03211 serine/threonine kinase US3; Provisional

Probab=99.78  E-value=1.1e-17  Score=114.46  Aligned_cols=111  Identities=13%  Similarity=-0.018  Sum_probs=95.6

Q ss_pred             cccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeEEEEEe
Q psy8006           6 NIISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLLE   85 (126)
Q Consensus         6 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~~lv~e   85 (126)
                      .|...+.||+|+||.||++.+..++..+|+|....        ..+.+|+.++++++| +||+++++.+...+..+++||
T Consensus       170 gy~i~~~Lg~G~~G~Vy~a~~~~~~~~vavK~~~~--------~~~~~E~~iL~~L~H-pnIv~l~~~~~~~~~~~lv~e  240 (461)
T PHA03211        170 GFAIHRALTPGSEGCVFESSHPDYPQRVVVKAGWY--------ASSVHEARLLRRLSH-PAVLALLDVRVVGGLTCLVLP  240 (461)
T ss_pred             CeEEEEEEccCCCeEEEEEEECCCCCEEEEecccc--------cCHHHHHHHHHHCCC-CCCCcEEEEEEECCEEEEEEE
Confidence            46778899999999999999999999999995322        135689999999999 999999999999999999999


Q ss_pred             ccCcccHHHHHHh-cCCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          86 LLTSAVDSKIRES-FGSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        86 ~~~~~~L~~~~~~-~~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      ++.+ +|..++.. ...++...+..++.|++.||+|||+.++
T Consensus       241 ~~~~-~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~yLH~~gI  281 (461)
T PHA03211        241 KYRS-DLYTYLGARLRPLGLAQVTAVARQLLSAIDYIHGEGI  281 (461)
T ss_pred             ccCC-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCE
Confidence            9975 47666654 3569999999999999999999998764

>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor

Probab=99.78  E-value=1.7e-17  Score=107.35  Aligned_cols=120  Identities=16%  Similarity=0.186  Sum_probs=96.6

Q ss_pred             ccccceeeccCccceeEEEEEEcc-----CCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCe
Q psy8006           5 KNIISSIINDMGKYATVRRCRDRK-----NGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHD   79 (126)
Q Consensus         5 ~~~~~~~~lg~g~~~~v~~~~~~~-----~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~   79 (126)
                      ..|...+.||+|+||.||+|....     .+..+|+|.+..... ......+.+|+.+++.++| ||++++++.+..+..
T Consensus         6 ~~~~i~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~e~~~l~~l~~-~~i~~~~~~~~~~~~   83 (288)
T cd05061           6 EKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESAS-LRERIEFLNEASVMKGFTC-HHVVRLLGVVSKGQP   83 (288)
T ss_pred             HHceeeeeecCCCCcEEEEEEEeccCCCCcceEEEEEECCCcCC-HHHHHHHHHHHHHHHhCCC-CCeeeEEEEEcCCCC
Confidence            456677899999999999987542     345799998865432 1223357889999999998 999999999988889


Q ss_pred             EEEEEeccCcccHHHHHHhc----------CCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          80 MILLLELLTSAVDSKIRESF----------GSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        80 ~~lv~e~~~~~~L~~~~~~~----------~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      .+++|||+++++|.+++...          ..++...+..++.|++.|+.|||+.++
T Consensus        84 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i  140 (288)
T cd05061          84 TLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKKF  140 (288)
T ss_pred             cEEEEeCCCCCCHHHHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCC
Confidence            99999999999999888642          234567888999999999999998764

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta

>KOG1094|consensus

Probab=99.78  E-value=1.1e-18  Score=119.09  Aligned_cols=116  Identities=15%  Similarity=0.195  Sum_probs=97.1

Q ss_pred             ccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeEEEEEec
Q psy8006           7 IISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLLEL   86 (126)
Q Consensus         7 ~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~~lv~e~   86 (126)
                      ....+.||+|.||.|..|+... +..||+|.++.... ...+..|.+|+.+|.+++| |||+.+.+.+..++.+++++||
T Consensus       540 L~~~ekiGeGqFGEVhLCeveg-~lkVAVK~Lr~~a~-~~~r~~F~kEIkiLsqLkh-PNIveLvGVC~~DePicmI~EY  616 (807)
T KOG1094|consen  540 LRFKEKIGEGQFGEVHLCEVEG-PLKVAVKILRPDAT-KNARNDFLKEIKILSRLKH-PNIVELLGVCVQDDPLCMITEY  616 (807)
T ss_pred             eehhhhhcCcccceeEEEEecC-ceEEEEeecCcccc-hhHHHHHHHHHHHHhccCC-CCeeEEEeeeecCCchHHHHHH
Confidence            3456789999999999998754 68899999987654 3345679999999999999 9999999999999999999999


Q ss_pred             cCcccHHHHHHhcC--CCCHHHHHHHHHHHHHHHHhhhccC
Q psy8006          87 LTSAVDSKIRESFG--SKSESGVQNCLEPSISVFSSLSKFE  125 (126)
Q Consensus        87 ~~~~~L~~~~~~~~--~~~~~~~~~~~~qi~~~l~~l~~~~  125 (126)
                      ++.|+|.+++....  .........++.||+++++||+...
T Consensus       617 mEnGDLnqFl~aheapt~~t~~~vsi~tqiasgmaYLes~n  657 (807)
T KOG1094|consen  617 MENGDLNQFLSAHELPTAETAPGVSICTQIASGMAYLESLN  657 (807)
T ss_pred             HhcCcHHHHHHhccCcccccchhHHHHHHHHHHHHHHHhhc
Confidence            99999999998753  2233445669999999999998653

>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl

Probab=99.78  E-value=1.4e-17  Score=106.68  Aligned_cols=117  Identities=10%  Similarity=0.056  Sum_probs=94.7

Q ss_pred             ceeeccCccceeEEEEEEccCCc--EEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeC------CeE
Q psy8006           9 SSIINDMGKYATVRRCRDRKNGT--QYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESS------HDM   80 (126)
Q Consensus         9 ~~~~lg~g~~~~v~~~~~~~~~~--~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~------~~~   80 (126)
                      .++.||+|+||.||+|....++.  .+|+|.+............+.+|+.++..++| ||++++++.+...      ...
T Consensus         3 i~~~ig~G~~g~V~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h-~~iv~~~~~~~~~~~~~~~~~~   81 (272)
T cd05075           3 LGKTLGEGEFGSVMEGQLNQDDSILKVAVKTMKIAICTRSEMEDFLSEAVCMKEFDH-PNVMRLIGVCLQTVESEGYPSP   81 (272)
T ss_pred             cccccCcccCceEEEeEEccCCCeeeEEEEecccCcCCHHHHHHHHHHHHHHHhCCC-CCcceEEEEEccCCcccCCCCc
Confidence            46789999999999999877665  68999887654444445568899999999998 9999999876421      247


Q ss_pred             EEEEeccCcccHHHHHHh------cCCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          81 ILLLELLTSAVDSKIRES------FGSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        81 ~lv~e~~~~~~L~~~~~~------~~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      ++++||+++++|.+++..      ...+++..+..++.|++.|++|||+.++
T Consensus        82 ~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i  133 (272)
T cd05075          82 VVILPFMKHGDLHSFLLYSRLGDCPQYLPTQMLVKFMTDIASGMEYLSSKSF  133 (272)
T ss_pred             EEEEEeCCCCcHHHHHHHhcccCCcccCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence            899999999999877632      1348899999999999999999998763

Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor

>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=99.78  E-value=9.5e-18  Score=107.26  Aligned_cols=113  Identities=12%  Similarity=0.025  Sum_probs=92.4

Q ss_pred             eeccCccceeEEEEEEcc------------CCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCC
Q psy8006          11 IINDMGKYATVRRCRDRK------------NGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSH   78 (126)
Q Consensus        11 ~~lg~g~~~~v~~~~~~~------------~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~   78 (126)
                      +.||+|+||.||+|....            ....+++|.+....  ......+..|+.++..++| ||++++++.+..+.
T Consensus         1 ~~lg~G~~~~vy~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~--~~~~~~~~~~~~~l~~l~h-p~iv~~~~~~~~~~   77 (262)
T cd05077           1 EHLGRGTRTQIYAGILNYKDDDEDDGYSYEKEIKVILKVLDPSH--RDISLAFFETASMMRQVSH-KHIVLLYGVCVRDV   77 (262)
T ss_pred             CccccCCcceEeeeecccCCCccccccchhhceeEEEeecChhh--hhHHHHHHHHHHHHHhCCC-CCEeeEEEEEecCC
Confidence            368999999999997432            22357888876543  2233457888899999998 99999999999888


Q ss_pred             eEEEEEeccCcccHHHHHHh-cCCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          79 DMILLLELLTSAVDSKIRES-FGSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        79 ~~~lv~e~~~~~~L~~~~~~-~~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      ..+++|||+++++|..++.. ...+++..+..++.|++.|++|||+.++
T Consensus        78 ~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i  126 (262)
T cd05077          78 ENIMVEEFVEFGPLDLFMHRKSDVLTTPWKFKVAKQLASALSYLEDKDL  126 (262)
T ss_pred             CCEEEEecccCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhhhCCe
Confidence            89999999999998887765 3568999999999999999999998764

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom

>KOG0584|consensus

Probab=99.77  E-value=6e-19  Score=120.47  Aligned_cols=116  Identities=15%  Similarity=0.197  Sum_probs=101.1

Q ss_pred             cceeeccCccceeEEEEEEccCCcEEEEEEeecCCC--CchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCC--eEEEE
Q psy8006           8 ISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRR--STDLKAEILHEVAVLEACRCNSRIVQLHQVFESSH--DMILL   83 (126)
Q Consensus         8 ~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~--~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~--~~~lv   83 (126)
                      .-..+||+|+|-+||+|.+..+|..||...++....  .+...+++..|+.+|+.++| |||+++++.+.+..  .+-+|
T Consensus        43 k~~evLGrGafKtVYka~De~~giEVAWnqvk~~d~~q~~~~leR~~~Ev~lLKsL~H-~NIirfy~SW~d~~n~~in~i  121 (632)
T KOG0584|consen   43 KFDEVLGRGAFKTVYKAFDEEEGIEVAWNQVKIRDVTQSPEELERLYSEVHLLKSLKH-PNIIRFYDSWVDTDNKTINFI  121 (632)
T ss_pred             ehhhhcccccceeeeeccccccchhhHHHHHhHHHhhcChHHHHHHHHHHHHHccCCC-CceeeeeeheecCCCceeeee
Confidence            347799999999999999999999988766654433  33445789999999999999 99999999997655  47889


Q ss_pred             EeccCcccHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhhcc
Q psy8006          84 LELLTSAVDSKIRESFGSKSESGVQNCLEPSISVFSSLSKF  124 (126)
Q Consensus        84 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~l~~~  124 (126)
                      .|++..|+|..+.++.+.++.+.+..|++||+.+|.|||..
T Consensus       122 TEL~TSGtLr~Y~kk~~~vn~kaik~W~RQILkGL~yLHs~  162 (632)
T KOG0584|consen  122 TELFTSGTLREYRKKHRRVNIKAIKSWCRQILKGLVYLHSQ  162 (632)
T ss_pred             eecccCCcHHHHHHHhccCCHHHHHHHHHHHHHHhhhhhcC
Confidence            99999999999999988999999999999999999999975

>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6

Probab=99.77  E-value=3.2e-17  Score=105.60  Aligned_cols=119  Identities=16%  Similarity=0.178  Sum_probs=98.3

Q ss_pred             ccccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEe------CC
Q psy8006           5 KNIISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFES------SH   78 (126)
Q Consensus         5 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~------~~   78 (126)
                      ..|...+.+|+|+||.||++.+..++..+|+|.+....   .....+..|+.++..+.+|+|++++++.+..      ..
T Consensus        16 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~a~K~~~~~~---~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~   92 (282)
T cd06636          16 GIFELVEVVGNGTYGQVYKGRHVKTGQLAAIKVMDVTE---DEEEEIKLEINMLKKYSHHRNIATYYGAFIKKSPPGHDD   92 (282)
T ss_pred             hhhhhheeeccCCCeEEEEEEEcCCCcEEEEEEEecCh---HHHHHHHHHHHHHHHhcCCCcEEEEeeehhcccccCCCC
Confidence            34556688999999999999999999999999986542   2234578899999998544999999998752      45


Q ss_pred             eEEEEEeccCcccHHHHHHhc--CCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          79 DMILLLELLTSAVDSKIRESF--GSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        79 ~~~lv~e~~~~~~L~~~~~~~--~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      ..+++|||+++++|.+++...  ..+++..+..++.|++.|++|||+.++
T Consensus        93 ~~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~i  142 (282)
T cd06636          93 QLWLVMEFCGAGSVTDLVKNTKGNALKEDWIAYICREILRGLAHLHAHKV  142 (282)
T ss_pred             EEEEEEEeCCCCcHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHCCc
Confidence            789999999999998888652  458888999999999999999998764

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea

>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases

Probab=99.77  E-value=2.3e-17  Score=107.65  Aligned_cols=118  Identities=19%  Similarity=0.198  Sum_probs=96.7

Q ss_pred             ccceeeccCccceeEEEEEEcc--CCcEEEEEEeecCCC-CchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeC--CeEE
Q psy8006           7 IISSIINDMGKYATVRRCRDRK--NGTQYAAKFLRKKRR-STDLKAEILHEVAVLEACRCNSRIVQLHQVFESS--HDMI   81 (126)
Q Consensus         7 ~~~~~~lg~g~~~~v~~~~~~~--~~~~~aiK~~~~~~~-~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~--~~~~   81 (126)
                      |...+.||+|++|.||+|.+..  ++..+|+|.+..... .........+|+.++..++| ||++++++.+...  ...+
T Consensus         2 y~~~~~ig~g~~g~v~~~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~e~~~l~~l~h-~~i~~~~~~~~~~~~~~~~   80 (316)
T cd07842           2 YEIEGCIGRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKEQYTGISQSACREIALLRELKH-ENVVSLVEVFLEHADKSVY   80 (316)
T ss_pred             ceEEEEeccCCcEEEEEEEecCCCCCCeEEEEEeccccccccCccHHHHHHHHHHHhcCC-CCccceEEEEeCCCCceEE
Confidence            4456779999999999999988  889999999987432 12223457889999999998 9999999999877  7899


Q ss_pred             EEEeccCcccHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          82 LLLELLTSAVDSKIRES-----FGSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        82 lv~e~~~~~~L~~~~~~-----~~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      +|||+++++ +.+++..     ...+++..+..++.|++.|+.|||+.++
T Consensus        81 lv~e~~~~~-l~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i  129 (316)
T cd07842          81 LLFDYAEHD-LWQIIKFHRQAKRVSIPPSMVKSLLWQILNGVHYLHSNWV  129 (316)
T ss_pred             EEEeCCCcC-HHHHHHhhccCCCcCcCHHHHHHHHHHHHHHHHHHHhCCE
Confidence            999999876 5555432     1368999999999999999999998763

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the

>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8

Probab=99.77  E-value=1.6e-17  Score=108.64  Aligned_cols=111  Identities=18%  Similarity=0.199  Sum_probs=90.4

Q ss_pred             eeeccCccceeEEEEEEc--cCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEe--CCeEEEEEe
Q psy8006          10 SIINDMGKYATVRRCRDR--KNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFES--SHDMILLLE   85 (126)
Q Consensus        10 ~~~lg~g~~~~v~~~~~~--~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~--~~~~~lv~e   85 (126)
                      ++.||+|+||.||+|.+.  .++..+|+|.+.....    .....+|+.++..++| |||+++++.+..  +...++++|
T Consensus         6 ~~~lG~G~~g~Vy~~~~~~~~~~~~~aiK~~~~~~~----~~~~~~E~~~l~~l~h-~niv~~~~~~~~~~~~~~~lv~e   80 (317)
T cd07868           6 GCKVGRGTYGHVYKAKRKDGKDDRDYALKQIEGTGI----SMSACREIALLRELKH-PNVISLQKVFLSHADRKVWLLFD   80 (317)
T ss_pred             ccccccCCCeEEEEEEEccCCCCceEEEEEECCCCC----cHHHHHHHHHHHhcCC-CCCcceeeeEecCCCcEEEEEEe
Confidence            568999999999999865  4678899999875432    2247789999999999 999999998853  456899999


Q ss_pred             ccCcccHHHHHHhc---------CCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          86 LLTSAVDSKIRESF---------GSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        86 ~~~~~~L~~~~~~~---------~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      |++++ |.+++...         ..+++..++.++.|++.|++|||+.++
T Consensus        81 ~~~~~-l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~i  129 (317)
T cd07868          81 YAEHD-LWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANWV  129 (317)
T ss_pred             ccCCC-HHHHHHhcccccccCCcccCCHHHHHHHHHHHHHHHHHHHhCCE
Confidence            98875 76665421         258999999999999999999998764

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p

>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2

Probab=99.77  E-value=1.4e-17  Score=108.10  Aligned_cols=120  Identities=17%  Similarity=0.208  Sum_probs=97.6

Q ss_pred             ccccceeeccCccceeEEEEEEcc----------------CCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCce
Q psy8006           5 KNIISSIINDMGKYATVRRCRDRK----------------NGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIV   68 (126)
Q Consensus         5 ~~~~~~~~lg~g~~~~v~~~~~~~----------------~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv   68 (126)
                      ++|...+.||+|+||.||.+.+..                ++..+|+|.+..... ......+.+|+.++..++| +|++
T Consensus         5 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~~~~~~~-~~~~~~~~~E~~~l~~l~~-~~i~   82 (296)
T cd05095           5 KRLTFKEKLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLREDAN-KNARNDFLKEIKIMSRLKD-PNII   82 (296)
T ss_pred             hhceeeeeccCCCCCeEEecccccccccccccccccCCCCceeEEEEEeccccCC-HHHHHHHHHHHHHHHhCCC-CCcc
Confidence            346677899999999999985432                234689998875432 2334568899999999998 9999


Q ss_pred             eeeeeeEeCCeEEEEEeccCcccHHHHHHhcC-----------CCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          69 QLHQVFESSHDMILLLELLTSAVDSKIRESFG-----------SKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        69 ~l~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~-----------~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      ++++.+..++..+++|||+++++|.+++....           .+++..+..++.|++.|++|||+.++
T Consensus        83 ~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i  151 (296)
T cd05095          83 RLLAVCITSDPLCMITEYMENGDLNQFLSRHEPQEAAEKADVVTISYSTLIFMATQIASGMKYLSSLNF  151 (296)
T ss_pred             eEEEEEecCCccEEEEEeCCCCcHHHHHHhcCcccccccccccccCHHHHHHHHHHHHHHHHHHHHCCe
Confidence            99999998899999999999999988886532           36677899999999999999998763

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit

>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase

Probab=99.77  E-value=1.7e-17  Score=107.25  Aligned_cols=121  Identities=20%  Similarity=0.146  Sum_probs=100.3

Q ss_pred             cccccceeeccCccceeEEEEEEc-----cCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCC
Q psy8006           4 IKNIISSIINDMGKYATVRRCRDR-----KNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSH   78 (126)
Q Consensus         4 ~~~~~~~~~lg~g~~~~v~~~~~~-----~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~   78 (126)
                      -++|...+.||+|+||.||++.+.     .++..+|+|.+..... ......+.+|+.++..++| ||++++++.+....
T Consensus         4 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aiK~~~~~~~-~~~~~~~~~ei~~l~~l~h-~~iv~~~~~~~~~~   81 (288)
T cd05050           4 RNNIEYVRDIGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEAS-ADMQADFQREAALMAEFDH-PNIVKLLGVCAVGK   81 (288)
T ss_pred             hHhceecccccccccccEEEEEEcccCCCCcceeEEEEecCCCcC-HHHHHHHHHHHHHHHhcCC-CchheEEEEEcCCC
Confidence            356777889999999999999864     3567899998875432 2233468899999999998 99999999998888


Q ss_pred             eEEEEEeccCcccHHHHHHhc----------------------CCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          79 DMILLLELLTSAVDSKIRESF----------------------GSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        79 ~~~lv~e~~~~~~L~~~~~~~----------------------~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      ..++++||+++++|.+++...                      ..+++..+..++.|++.|+.|||..++
T Consensus        82 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~aL~~lH~~~i  151 (288)
T cd05050          82 PMCLLFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCTEQLCIAKQVAAGMAYLSERKF  151 (288)
T ss_pred             ccEEEEecCCCCCHHHHHHHcCccccccccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhCCe
Confidence            999999999999998888632                      246788899999999999999998763

Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M

>KOG0193|consensus

Probab=99.77  E-value=1.6e-18  Score=118.33  Aligned_cols=116  Identities=14%  Similarity=0.062  Sum_probs=102.0

Q ss_pred             cccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeEEEEEe
Q psy8006           6 NIISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLLE   85 (126)
Q Consensus         6 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~~lv~e   85 (126)
                      .+.....||+|.||+||+|.+-.+   ||||.+.-....+...+.|.+|+..+++-+| .||+-+.+++..++. .||..
T Consensus       393 ev~l~~rIGsGsFGtV~Rg~whGd---VAVK~Lnv~~pt~~qlqaFKnEVa~lkkTRH-~NIlLFMG~~~~p~~-AIiTq  467 (678)
T KOG0193|consen  393 EVLLGERIGSGSFGTVYRGRWHGD---VAVKLLNVDDPTPEQLQAFKNEVAVLKKTRH-ENILLFMGACMNPPL-AIITQ  467 (678)
T ss_pred             Hhhccceeccccccceeecccccc---eEEEEEecCCCCHHHHHHHHHHHHHHhhcch-hhheeeehhhcCCce-eeeeh
Confidence            355678899999999999987544   9999999887777767789999999999999 999999999998887 99999


Q ss_pred             ccCcccHHHHHHh-cCCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          86 LLTSAVDSKIRES-FGSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        86 ~~~~~~L~~~~~~-~~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      +|+|.+|+.++.- +-+|.....+.|++|++.|+.|||-.+|
T Consensus       468 wCeGsSLY~hlHv~etkfdm~~~idIAqQiaqGM~YLHAK~I  509 (678)
T KOG0193|consen  468 WCEGSSLYTHLHVQETKFDMNTTIDIAQQIAQGMDYLHAKNI  509 (678)
T ss_pred             hccCchhhhhccchhhhhhHHHHHHHHHHHHHhhhhhhhhhh
Confidence            9999999988863 3478889999999999999999997664

>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase

Probab=99.77  E-value=3.1e-17  Score=104.27  Aligned_cols=117  Identities=15%  Similarity=0.118  Sum_probs=99.4

Q ss_pred             ccccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeEEEEE
Q psy8006           5 KNIISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLL   84 (126)
Q Consensus         5 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~~lv~   84 (126)
                      ..+...+.||+|++|.||++.+. .+..+++|.+......   ...+.+|+++++.++| |+++++++.+......++++
T Consensus         4 ~~~~~~~~ig~g~~g~v~~~~~~-~~~~~~~k~~~~~~~~---~~~~~~e~~~l~~l~~-~~i~~~~~~~~~~~~~~~v~   78 (256)
T cd05112           4 SELTLVQEIGSGQFGLVWLGYWL-EKRKVAIKTIREGAMS---EEDFIEEAQVMMKLSH-PKLVQLYGVCTERSPICLVF   78 (256)
T ss_pred             hHeEEEeeecCcccceEEEEEEe-CCCeEEEEECCCCCCC---HHHHHHHHHHHHhCCC-CCeeeEEEEEccCCceEEEE
Confidence            45666789999999999999875 3668999988765433   2358889999999998 99999999998888999999


Q ss_pred             eccCcccHHHHHHhc-CCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          85 ELLTSAVDSKIRESF-GSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        85 e~~~~~~L~~~~~~~-~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      ||+++++|.+++... ..+++..+..++.|++.++++||+.++
T Consensus        79 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i  121 (256)
T cd05112          79 EFMEHGCLSDYLRAQRGKFSQETLLGMCLDVCEGMAYLESSNV  121 (256)
T ss_pred             EcCCCCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHCCc
Confidence            999999998888653 468999999999999999999998763

Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ

>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4

Probab=99.77  E-value=2.7e-17  Score=107.60  Aligned_cols=121  Identities=12%  Similarity=0.131  Sum_probs=97.9

Q ss_pred             ccccceeeccCccceeEEEEEEcc-------CCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeC
Q psy8006           5 KNIISSIINDMGKYATVRRCRDRK-------NGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESS   77 (126)
Q Consensus         5 ~~~~~~~~lg~g~~~~v~~~~~~~-------~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~   77 (126)
                      .+|...+.||+|+||.||++.+..       ....+|+|.+..... ......+.+|+.++..+..|||++++++.+...
T Consensus        12 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~~~~~aiK~~~~~~~-~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~   90 (314)
T cd05099          12 DRLVLGKPLGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNAT-DKDLADLISEMELMKLIGKHKNIINLLGVCTQE   90 (314)
T ss_pred             HHeeeeeeecCCCcccEEEeeecccCCccCCcceEEEEEecCCCCC-hHHHHHHHHHHHHHHhccCCCCeeeEEEEEccC
Confidence            346678899999999999997532       344689998875432 233446888999999995339999999999888


Q ss_pred             CeEEEEEeccCcccHHHHHHhc----------------CCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          78 HDMILLLELLTSAVDSKIRESF----------------GSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        78 ~~~~lv~e~~~~~~L~~~~~~~----------------~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      +..+++|||+++++|.+++...                ..++...+..++.|++.|+.|||+.++
T Consensus        91 ~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~gi  155 (314)
T cd05099          91 GPLYVIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKDLVSCAYQVARGMEYLESRRC  155 (314)
T ss_pred             CceEEEEecCCCCcHHHHHHhcCCCcccccccccCCcccccCHHHHHHHHHHHHHHHHHHHHCCe
Confidence            8899999999999999888642                247888899999999999999998764

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2

Probab=99.77  E-value=1.8e-17  Score=107.91  Aligned_cols=120  Identities=10%  Similarity=0.121  Sum_probs=97.5

Q ss_pred             ccccceeeccCccceeEEEEEEc-------cCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHh-cCCCCceeeeeeeEe
Q psy8006           5 KNIISSIINDMGKYATVRRCRDR-------KNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEAC-RCNSRIVQLHQVFES   76 (126)
Q Consensus         5 ~~~~~~~~lg~g~~~~v~~~~~~-------~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~-~~~~~iv~l~~~~~~   76 (126)
                      .+|...+.||+|+||.||.+...       ..+..+++|.+..... ......+.+|+.++..+ +| ||++++++.+..
T Consensus        15 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~~~v~iK~~~~~~~-~~~~~~~~~E~~~l~~l~~h-~~i~~~~~~~~~   92 (304)
T cd05101          15 DKLTLGKPLGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDDAT-EKDLSDLVSEMEMMKMIGKH-KNIINLLGACTQ   92 (304)
T ss_pred             HHeeecceeeccCCceEEEEEEeccCCCCCCcceeEEeeecccccc-hHHHHHHHHHHHHHHhhccC-CCchheeEEEec
Confidence            45667889999999999999742       2344789998875432 23345688999999999 56 999999999998


Q ss_pred             CCeEEEEEeccCcccHHHHHHhc----------------CCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          77 SHDMILLLELLTSAVDSKIRESF----------------GSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        77 ~~~~~lv~e~~~~~~L~~~~~~~----------------~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      ....+++|||+++++|.+++...                ..++...+..++.|++.|+.|||+.++
T Consensus        93 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~gi  158 (304)
T cd05101          93 DGPLYVIVEYASKGNLREYLRARRPPGMEYSYDIARVPDEQMTFKDLVSCTYQVARGMEYLASQKC  158 (304)
T ss_pred             CCceEEEEecCCCCcHHHHHHhcCCcccccccccccCCcccccHHHHHHHHHHHHHHHHHHHHCCe
Confidence            88999999999999999888653                246778889999999999999998764

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1

Probab=99.77  E-value=4.3e-17  Score=107.44  Aligned_cols=119  Identities=16%  Similarity=0.095  Sum_probs=97.1

Q ss_pred             ccceeeccCccceeEEEEEEccC--CcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEe----CCeE
Q psy8006           7 IISSIINDMGKYATVRRCRDRKN--GTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFES----SHDM   80 (126)
Q Consensus         7 ~~~~~~lg~g~~~~v~~~~~~~~--~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~----~~~~   80 (126)
                      |...+.||+|+||.||++.+..+  +..+|+|.+..........+.+.+|+.+++++.+|||++++++....    ....
T Consensus         2 y~~~~~lg~G~~g~vy~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~~~~   81 (332)
T cd07857           2 YELIKELGQGAYGIVCSARNAETSEEETVAIKKITNVFSKKILAKRALRELKLLRHFRGHKNITCLYDMDIVFPGNFNEL   81 (332)
T ss_pred             ceEEEEccccCCeEEEEEEeCCCCcCceEEEEEeccccccchhHHHHHHHHHHHHHhcCCCChheeeeeeeeccccCCcE
Confidence            55678899999999999999887  88999999875443333345678899999999644999999886532    2357


Q ss_pred             EEEEeccCcccHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          81 ILLLELLTSAVDSKIRESFGSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        81 ~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      +++++++++ +|.+++.....+++..+..++.|++.|++|||+.++
T Consensus        82 ~~~~e~~~~-~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~gi  126 (332)
T cd07857          82 YLYEELMEA-DLHQIIRSGQPLTDAHFQSFIYQILCGLKYIHSANV  126 (332)
T ss_pred             EEEEecccC-CHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCc
Confidence            899998875 588888777789999999999999999999999874

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co

>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=99.77  E-value=3.1e-17  Score=105.74  Aligned_cols=118  Identities=11%  Similarity=0.084  Sum_probs=96.6

Q ss_pred             cccceeeccCccceeEEEEE----EccCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEe--CCe
Q psy8006           6 NIISSIINDMGKYATVRRCR----DRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFES--SHD   79 (126)
Q Consensus         6 ~~~~~~~lg~g~~~~v~~~~----~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~--~~~   79 (126)
                      .+...+.||+|+||.||.+.    ...++..+|+|.+..... ......+.+|+.++++++| ||++++++.+..  ...
T Consensus         5 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~E~~~l~~l~h-~~i~~~~~~~~~~~~~~   82 (283)
T cd05080           5 YLKKIRVLGEGHFGKVSLYCYDPANDGTGEMVAVKTLKRECG-QQNTSGWKKEINILKTLYH-ENIVKYKGCCSEQGGKG   82 (283)
T ss_pred             hceeceecccCCCcEEEEeeEccccCCCCceEEEEEeccccC-hHHHHHHHHHHHHHHhCCC-CCEeeEEEEEecCCCce
Confidence            34667899999999998764    345677899999876532 2234468899999999998 999999998754  346


Q ss_pred             EEEEEeccCcccHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          80 MILLLELLTSAVDSKIRESFGSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        80 ~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      .+++|||+++++|.+++.. ..+++..+..++.|++.|+.|||+.++
T Consensus        83 ~~lv~e~~~~~~l~~~~~~-~~l~~~~~~~i~~~l~~~l~~lH~~~i  128 (283)
T cd05080          83 LQLIMEYVPLGSLRDYLPK-HKLNLAQLLLFAQQICEGMAYLHSQHY  128 (283)
T ss_pred             EEEEecCCCCCCHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence            8999999999999988875 459999999999999999999998763

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign

>KOG0604|consensus

Probab=99.77  E-value=5.4e-19  Score=112.40  Aligned_cols=111  Identities=15%  Similarity=0.191  Sum_probs=96.9

Q ss_pred             ceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEe----CCeEEEEE
Q psy8006           9 SSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFES----SHDMILLL   84 (126)
Q Consensus         9 ~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~----~~~~~lv~   84 (126)
                      ..++||-|..|+|..|.+++++..+|+|++....       ...+|+++....+.|||||++.+.+.+    ...+.+||
T Consensus        66 s~qvLG~GinGkV~~C~~k~T~ekfALKvL~Ds~-------KARrEVeLHw~~s~h~~iV~IidVyeNs~~~rkcLLiVm  138 (400)
T KOG0604|consen   66 SWQVLGAGINGKVVQCVHKRTQEKFALKVLLDSP-------KARREVELHWMASGHPHIVSIIDVYENSYQGRKCLLIVM  138 (400)
T ss_pred             hhhhhccccCCceEEEEeccchhhhHHHHHhcCH-------HHHhHhhhhhhhcCCCceEEeehhhhhhccCceeeEeee
Confidence            3578999999999999999999999999887542       467899988888777999999998863    23678999


Q ss_pred             eccCcccHHHHHHhcC--CCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          85 ELLTSAVDSKIRESFG--SKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        85 e~~~~~~L~~~~~~~~--~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      |.++||.|.+.+++++  .|+|+++..+++||..|+.|||.+.|
T Consensus       139 E~meGGeLfsriq~~g~~afTErea~eI~~qI~~Av~~lH~~nI  182 (400)
T KOG0604|consen  139 ECMEGGELFSRIQDRGDQAFTEREASEIMKQIGLAVRYLHSMNI  182 (400)
T ss_pred             ecccchHHHHHHHHcccccchHHHHHHHHHHHHHHHHHHHhcch
Confidence            9999999999998765  59999999999999999999999864

>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15

Probab=99.77  E-value=1.9e-17  Score=109.22  Aligned_cols=119  Identities=14%  Similarity=0.143  Sum_probs=98.6

Q ss_pred             ccccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHh-cCCCCceeeeeeeEeC--CeEE
Q psy8006           5 KNIISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEAC-RCNSRIVQLHQVFESS--HDMI   81 (126)
Q Consensus         5 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~-~~~~~iv~l~~~~~~~--~~~~   81 (126)
                      .+|...+.||+|+||.||+|.+..++..+++|.+............+.+|+.++.++ +| ||++++++++...  ...+
T Consensus         7 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~E~~~l~~l~~h-~ni~~~~~~~~~~~~~~~~   85 (337)
T cd07852           7 RKYEILQKLGKGAYGIVWKAIDRRTKEVVALKKIFDAFRNATDAQRTFREIMFLQELGDH-PNIVKLLNVIKAENDKDIY   85 (337)
T ss_pred             hHHHHhHhhcCCCCeeEEEEEEcCCCeEEEEEeeccccCcchhhhhhhHHHHHHHHhcCC-CCccceeeeeccCCCceEE
Confidence            456778899999999999999998899999998865433333344577899999999 76 9999999987643  3689


Q ss_pred             EEEeccCcccHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          82 LLLELLTSAVDSKIRESFGSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        82 lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      +||||+++ +|..++..+ .+++.....++.|++.+++|||..++
T Consensus        86 lv~e~~~~-~L~~~~~~~-~~~~~~~~~i~~qi~~~L~~LH~~~i  128 (337)
T cd07852          86 LVFEYMET-DLHAVIRAN-ILEDVHKRYIMYQLLKALKYIHSGNV  128 (337)
T ss_pred             EEeccccc-CHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence            99999986 588888764 78888999999999999999998764

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul

>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein

Probab=99.76  E-value=3.2e-17  Score=106.08  Aligned_cols=119  Identities=12%  Similarity=0.150  Sum_probs=97.0

Q ss_pred             cccceeeccCccceeEEEEEEcc-----CCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeE
Q psy8006           6 NIISSIINDMGKYATVRRCRDRK-----NGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDM   80 (126)
Q Consensus         6 ~~~~~~~lg~g~~~~v~~~~~~~-----~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~   80 (126)
                      +|...+.||+|+||.||+|.+..     ....+++|.+..... ......+.+|+.++..++| |||+++++.+...+..
T Consensus         1 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~-~~~~~~~~~E~~~l~~l~h-~~iv~~~~~~~~~~~~   78 (290)
T cd05045           1 NLVLGKTLGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENAS-SSELRDLLSEFNLLKQVNH-PHVIKLYGACSQDGPL   78 (290)
T ss_pred             CccccccccCcCCcceEEEEEecCCCCCcceeEEEEecCCCCC-HHHHHHHHHHHHHHhhCCC-CCEeeEEEEEecCCCc
Confidence            35667899999999999998643     224688888865432 2234468899999999998 9999999999988899


Q ss_pred             EEEEeccCcccHHHHHHhc------------------------CCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          81 ILLLELLTSAVDSKIRESF------------------------GSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        81 ~lv~e~~~~~~L~~~~~~~------------------------~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      ++++||+.+++|.+++...                        ..++...+..++.|++.|+.|||+.++
T Consensus        79 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i  148 (290)
T cd05045          79 LLIVEYAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDERALTMGDLISFAWQISRGMQYLAEMKL  148 (290)
T ss_pred             EEEEEecCCCCHHHHHHhcCCccccccccccccccccccCccccccCHHHHHHHHHHHHHHHHHHHHCCe
Confidence            9999999999998887531                        247788999999999999999998764

Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi

>PHA03207 serine/threonine kinase US3; Provisional

Probab=99.76  E-value=2.4e-17  Score=110.90  Aligned_cols=111  Identities=9%  Similarity=0.044  Sum_probs=94.9

Q ss_pred             ccceeeccCccceeEEEEEEc--cCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeEEEEE
Q psy8006           7 IISSIINDMGKYATVRRCRDR--KNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLL   84 (126)
Q Consensus         7 ~~~~~~lg~g~~~~v~~~~~~--~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~~lv~   84 (126)
                      |...+.||+|+||.||+|...  ..+..+++|.+....       ...+|+.+++.++| |||+++++.+......+++|
T Consensus        94 y~i~~~Lg~G~~g~Vy~~~~~~~~~~~~v~vK~~~~~~-------~~~~E~~il~~l~h-~~iv~~~~~~~~~~~~~lv~  165 (392)
T PHA03207         94 YNILSSLTPGSEGEVFVCTKHGDEQRKKVIVKAVTGGK-------TPGREIDILKTISH-RAIINLIHAYRWKSTVCMVM  165 (392)
T ss_pred             eEEEEeecCCCCeEEEEEEEcCCccceeEEEEeccccc-------cHHHHHHHHHhcCC-CCccceeeeEeeCCEEEEEe
Confidence            667789999999999999754  456789999876432       34689999999998 99999999999889999999


Q ss_pred             eccCcccHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          85 ELLTSAVDSKIRESFGSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        85 e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      |++.++ |.+++.....+++..+..++.|++.|++|||+.++
T Consensus       166 e~~~~~-l~~~l~~~~~l~~~~~~~i~~ql~~aL~~LH~~gi  206 (392)
T PHA03207        166 PKYKCD-LFTYVDRSGPLPLEQAITIQRRLLEALAYLHGRGI  206 (392)
T ss_pred             hhcCCC-HHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCc
Confidence            999765 77777766789999999999999999999999764

>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase

Probab=99.76  E-value=3.2e-17  Score=108.63  Aligned_cols=119  Identities=18%  Similarity=0.206  Sum_probs=97.7

Q ss_pred             ccccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeC------C
Q psy8006           5 KNIISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESS------H   78 (126)
Q Consensus         5 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~------~   78 (126)
                      ++|...+.||+|+||.||.+.+..++..+|+|.+............+.+|+.++.+++| |||+++.+.+...      .
T Consensus        17 ~~y~~~~~lg~G~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~h-~~iv~~~~~~~~~~~~~~~~   95 (345)
T cd07877          17 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKH-ENVIGLLDVFTPARSLEEFN   95 (345)
T ss_pred             CceEEEEEeeecCCeEEEEEEEcCCCeEEEEEEecCcchhhHHHHHHHHHHHHHHHcCC-Ccccceeeeeeecccccccc
Confidence            56778889999999999999999999999999997654333333457889999999998 9999999887543      3


Q ss_pred             eEEEEEeccCcccHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          79 DMILLLELLTSAVDSKIRESFGSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        79 ~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      ..+++++++ +++|.++++. ..+++..+..++.|++.|++|||+.++
T Consensus        96 ~~~lv~~~~-~~~L~~~~~~-~~l~~~~~~~i~~qi~~aL~~LH~~~i  141 (345)
T cd07877          96 DVYLVTHLM-GADLNNIVKC-QKLTDDHVQFLIYQILRGLKYIHSADI  141 (345)
T ss_pred             cEEEEehhc-ccCHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence            478888877 5568777764 468999999999999999999999864

Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14

>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes

Probab=99.76  E-value=3.2e-17  Score=104.56  Aligned_cols=116  Identities=11%  Similarity=0.112  Sum_probs=95.6

Q ss_pred             ccccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeEEEEE
Q psy8006           5 KNIISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLL   84 (126)
Q Consensus         5 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~~lv~   84 (126)
                      .++...+.||+|++|.||++.+..+ ..+++|.+.....   ....+.+|+.++..++| |+++++++.+. .+..+++|
T Consensus         6 ~~~~~~~~ig~g~~~~v~~~~~~~~-~~~~lK~~~~~~~---~~~~~~~E~~~l~~l~h-~~i~~~~~~~~-~~~~~~v~   79 (260)
T cd05069           6 ESLRLDVKLGQGCFGEVWMGTWNGT-TKVAIKTLKPGTM---MPEAFLQEAQIMKKLRH-DKLVPLYAVVS-EEPIYIVT   79 (260)
T ss_pred             HHeeeeeeecCcCCCeEEEEEEcCC-ceEEEEEcccCCc---cHHHHHHHHHHHHhCCC-CCeeeEEEEEc-CCCcEEEE
Confidence            4567788999999999999987654 4589998865432   23468889999999998 99999998774 45688999


Q ss_pred             eccCcccHHHHHHhc--CCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          85 ELLTSAVDSKIRESF--GSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        85 e~~~~~~L~~~~~~~--~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      ||+.+++|.+++...  ..++...+..++.|++.|++|||+.++
T Consensus        80 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i  123 (260)
T cd05069          80 EFMGKGSLLDFLKEGDGKYLKLPQLVDMAAQIADGMAYIERMNY  123 (260)
T ss_pred             EcCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCE
Confidence            999999999888653  347889999999999999999998763

Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an

>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk

Probab=99.76  E-value=3.4e-17  Score=104.37  Aligned_cols=116  Identities=13%  Similarity=0.131  Sum_probs=96.8

Q ss_pred             ccccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeEEEEE
Q psy8006           5 KNIISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLL   84 (126)
Q Consensus         5 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~~lv~   84 (126)
                      +.|...+.+|+|++|.||++... .+..+|+|.+......   ...+.+|+.++++++| ++++++++.+. ....+++|
T Consensus         6 ~~~~~~~~ig~g~~~~v~~~~~~-~~~~~~~k~~~~~~~~---~~~~~~E~~~l~~l~~-~~i~~~~~~~~-~~~~~lv~   79 (260)
T cd05070           6 ESLQLIKKLGNGQFGEVWMGTWN-GNTKVAVKTLKPGTMS---PESFLEEAQIMKKLRH-DKLVQLYAVVS-EEPIYIVT   79 (260)
T ss_pred             HHhhhhheeccccCceEEEEEec-CCceeEEEEecCCCCC---HHHHHHHHHHHHhcCC-CceEEEEeEEC-CCCcEEEE
Confidence            45667788999999999999765 4567999998765432   3368899999999998 99999998774 45689999


Q ss_pred             eccCcccHHHHHHhc--CCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          85 ELLTSAVDSKIRESF--GSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        85 e~~~~~~L~~~~~~~--~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      ||+++++|.+++...  ..+++..+..++.|++.|++|||+.++
T Consensus        80 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i  123 (260)
T cd05070          80 EYMSKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIERMNY  123 (260)
T ss_pred             EecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCc
Confidence            999999999888652  358999999999999999999998764

Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r

>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors

Probab=99.76  E-value=2e-17  Score=109.35  Aligned_cols=120  Identities=11%  Similarity=0.044  Sum_probs=96.3

Q ss_pred             cccceeeccCccceeEEEEEEc-----cCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEe-CCe
Q psy8006           6 NIISSIINDMGKYATVRRCRDR-----KNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFES-SHD   79 (126)
Q Consensus         6 ~~~~~~~lg~g~~~~v~~~~~~-----~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~-~~~   79 (126)
                      .|...+.||+|+||.||.|...     .+++.+|+|.++.... ......+.+|+.++.++.+|+|++++++.+.. ...
T Consensus         8 ~~~i~~~lG~G~fg~Vy~a~~~~~~~~~~~~~va~K~~~~~~~-~~~~~~~~~E~~~~~~l~~h~niv~~~~~~~~~~~~   86 (337)
T cd05054           8 RLKLGKPLGRGAFGKVIQASAFGIEKSASCRTVAVKMLKEGAT-ASEYKALMTELKILIHIGHHLNVVNLLGACTKPGGP   86 (337)
T ss_pred             HhhhhcccccCcCceEEeccccccccccccceeeeeeccCCCC-HHHHHHHHHHHHHHHhhccCcchhheeeeEecCCCC
Confidence            6777899999999999999643     3457899999875432 22334578899999999444999999998764 456


Q ss_pred             EEEEEeccCcccHHHHHHhc------------------------------------------------------------
Q psy8006          80 MILLLELLTSAVDSKIRESF------------------------------------------------------------   99 (126)
Q Consensus        80 ~~lv~e~~~~~~L~~~~~~~------------------------------------------------------------   99 (126)
                      .++++||+++++|.+++...                                                            
T Consensus        87 ~~~v~ey~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  166 (337)
T cd05054          87 LMVIVEYCKFGNLSNYLRSKRECFSPYRNKSTRKREMKQKEGKKQRLDSVSSSQSSASSGFIEDKSLSDVEEDEEGDELY  166 (337)
T ss_pred             EEEEEecCCCCCHHHHHHhccccccccccccccccccccccccccccccCCccccccccccccCcchhhcccchhhhHHh
Confidence            88999999999998887531                                                            


Q ss_pred             -CCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006         100 -GSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus       100 -~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                       ..++...+..++.|++.|++|||+.++
T Consensus       167 ~~~l~~~~~~~~~~qi~~aL~~lH~~~i  194 (337)
T cd05054         167 KEPLTLEDLISYSFQVARGMEFLASRKC  194 (337)
T ss_pred             hcCCCHHHHHHHHHHHHHHHHHHHhCCe
Confidence             257888999999999999999998764

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto

>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases

Probab=99.76  E-value=1.1e-17  Score=107.47  Aligned_cols=116  Identities=19%  Similarity=0.245  Sum_probs=101.0

Q ss_pred             ceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeEEEEEeccC
Q psy8006           9 SSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLLELLT   88 (126)
Q Consensus         9 ~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~~lv~e~~~   88 (126)
                      ..+.||+|.+|.||.|.+..++..+++|.+............+..|+.+++.++| ++++++++.+...+..++++|+++
T Consensus         3 ~~~~ig~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~~-~~i~~~~~~~~~~~~~~~v~e~~~   81 (282)
T cd07829           3 KLEKLGEGTYGVVYKARDKKTGEIVALKKIRLDNEEEGIPSTALREISLLKELKH-PNIVKLLDVIHTERKLYLVFEYCD   81 (282)
T ss_pred             eehcccccCcceEEEeeecCCCcEEEEEEeccccccccccHHHHHHHHHHHhcCC-CCHHHHHhhhhcCCceEEEecCcC
Confidence            4567999999999999999999999999998765333344567889999999998 999999999998899999999998


Q ss_pred             cccHHHHHHhc-CCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          89 SAVDSKIRESF-GSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        89 ~~~L~~~~~~~-~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      + +|.+++.+. ..+++..+..++.|++.++++||+.++
T Consensus        82 ~-~l~~~i~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i  119 (282)
T cd07829          82 M-DLKKYLDKRPGPLSPNLIKSIMYQLLRGLAYCHSHRI  119 (282)
T ss_pred             c-CHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHCCc
Confidence            6 698888765 579999999999999999999998764

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the

>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6

Probab=99.76  E-value=2.8e-17  Score=108.76  Aligned_cols=118  Identities=14%  Similarity=0.118  Sum_probs=99.0

Q ss_pred             cccccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeC------
Q psy8006           4 IKNIISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESS------   77 (126)
Q Consensus         4 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~------   77 (126)
                      ..+|...+.||.|+||.||+|.+..++..+++|.+.....  .....+.+|+.+++.++| ||++++++.+...      
T Consensus         4 ~~~y~~~~~Lg~g~~g~vy~~~~~~~~~~v~iK~i~~~~~--~~~~~~~~Ei~~l~~l~h-~~i~~~~~~~~~~~~~~~~   80 (342)
T cd07854           4 GSRYMDLRPLGCGSNGLVFSAVDSDCDKRVAVKKIVLTDP--QSVKHALREIKIIRRLDH-DNIVKVYEVLGPSGSDLTE   80 (342)
T ss_pred             CcceEEEEEecCCCCEEEEEEEECCCCcEEEEEEEecCCC--chHHHHHHHHHHHHhcCC-CcchhhHhhhccccccccc
Confidence            3567888999999999999999999999999999876543  233458889999999998 9999998776543      


Q ss_pred             --------CeEEEEEeccCcccHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          78 --------HDMILLLELLTSAVDSKIRESFGSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        78 --------~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                              ...++++||+++ +|.+++.. ..+++..+..++.|++.|++|||+.++
T Consensus        81 ~~~~~~~~~~~~lv~e~~~~-~L~~~~~~-~~l~~~~~~~~~~qi~~aL~~LH~~gi  135 (342)
T cd07854          81 DVGSLTELNSVYIVQEYMET-DLANVLEQ-GPLSEEHARLFMYQLLRGLKYIHSANV  135 (342)
T ss_pred             ccccccccceEEEEeecccc-cHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHhCCc
Confidence                    357899999985 58777764 468999999999999999999998764

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi

>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases

Probab=99.76  E-value=2.2e-17  Score=106.15  Aligned_cols=116  Identities=20%  Similarity=0.242  Sum_probs=99.5

Q ss_pred             ceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeEEEEEeccC
Q psy8006           9 SSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLLELLT   88 (126)
Q Consensus         9 ~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~~lv~e~~~   88 (126)
                      ..+.||+|++|.||++.+..++..+++|.+............+.+|+.+++.++| ++++++++.+..+...++++||++
T Consensus         3 ~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~-~~i~~~~~~~~~~~~~~~v~e~~~   81 (283)
T cd05118           3 KLGKIGEGTYGVVYKARDKLTGEIVAIKKIKLRFESEGIPKTALREIKLLKELNH-PNIIKLLDVFRHKGDLYLVFEFMD   81 (283)
T ss_pred             cceeeecCCCceEEEEEcCCCCcEEEEEEeccccccchhHHHHHHHHHHHHHhcC-CCcchHHHhhccCCCEEEEEeccC
Confidence            4567999999999999998899999999988765443444568889999999998 999999999998999999999998


Q ss_pred             cccHHHHHHh-cCCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          89 SAVDSKIRES-FGSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        89 ~~~L~~~~~~-~~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      + ++.+++.. ...+++..+..++.|++.+++|||+.++
T Consensus        82 ~-~l~~~l~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i  119 (283)
T cd05118          82 T-DLYKLIKDRQRGLPESLIKSYLYQLLQGLAFCHSHGI  119 (283)
T ss_pred             C-CHHHHHHhhcccCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence            7 47666654 4578999999999999999999998763

Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They

>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros

Probab=99.76  E-value=1.1e-17  Score=106.92  Aligned_cols=114  Identities=16%  Similarity=0.079  Sum_probs=94.2

Q ss_pred             eeccCccceeEEEEEEccCC------cEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeEEEEE
Q psy8006          11 IINDMGKYATVRRCRDRKNG------TQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLL   84 (126)
Q Consensus        11 ~~lg~g~~~~v~~~~~~~~~------~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~~lv~   84 (126)
                      +.||+|+||.||.+......      ..+++|.+..... ......+.+|+.+++.++| |||+++++.+..++..+++|
T Consensus         1 ~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~iK~~~~~~~-~~~~~~~~~e~~~l~~l~h-~~i~~~~~~~~~~~~~~~v~   78 (269)
T cd05044           1 NFLGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGAT-DQEKKEFLKEAHLMSNFNH-PNIVKLLGVCLLNEPQYIIM   78 (269)
T ss_pred             CccccccceeEEeeeecccccCcccceeehhhhhhcccc-hhhHHHHHHHHHHHHhcCC-CCeeeEeeeecCCCCeEEEE
Confidence            36899999999999875433      5789998865432 2234468899999999998 99999999999888999999


Q ss_pred             eccCcccHHHHHHhc-------CCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          85 ELLTSAVDSKIRESF-------GSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        85 e~~~~~~L~~~~~~~-------~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      |++++++|.+++...       ..++...+..++.|++.|++|||+.++
T Consensus        79 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i  127 (269)
T cd05044          79 ELMEGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGCVYLEQMHF  127 (269)
T ss_pred             eccCCCcHHHHHHHhhhcccCCccccHHHHHHHHHHHHHHHHHHHhCCc
Confidence            999999998888642       247888999999999999999998763

Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male

>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2

Probab=99.76  E-value=5.4e-17  Score=104.48  Aligned_cols=119  Identities=16%  Similarity=0.141  Sum_probs=98.0

Q ss_pred             ccccceeeccCccceeEEEEEEccCCc----EEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeE
Q psy8006           5 KNIISSIINDMGKYATVRRCRDRKNGT----QYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDM   80 (126)
Q Consensus         5 ~~~~~~~~lg~g~~~~v~~~~~~~~~~----~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~   80 (126)
                      ..|...+.||+|+||.||+|.+..++.    .+|+|.+..... ......+.+|+.++..++| ||++.+++.+.. ...
T Consensus         7 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~va~K~~~~~~~-~~~~~~~~~e~~~l~~~~~-~~i~~~~~~~~~-~~~   83 (279)
T cd05109           7 TELKKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTS-PKANKEILDEAYVMAGVGS-PYVCRLLGICLT-STV   83 (279)
T ss_pred             hheeeeeecCCCCCceEEEEEEecCCCccceEEEEEEecCCCC-HHHHHHHHHHHHHHHhcCC-CCCceEEEEEcC-CCc
Confidence            456677899999999999998776665    479998875432 2334468899999999998 999999988864 457


Q ss_pred             EEEEeccCcccHHHHHHh-cCCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          81 ILLLELLTSAVDSKIRES-FGSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        81 ~lv~e~~~~~~L~~~~~~-~~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      ++++|++++|+|.+++.. ...+++..+..++.|++.|++|||+.++
T Consensus        84 ~l~~~~~~~g~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i  130 (279)
T cd05109          84 QLVTQLMPYGCLLDYVRENKDRIGSQDLLNWCVQIAKGMSYLEEVRL  130 (279)
T ss_pred             EEEEEcCCCCCHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence            789999999999888875 3568999999999999999999998763

Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve

>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2

Probab=99.76  E-value=3.7e-17  Score=104.75  Aligned_cols=113  Identities=11%  Similarity=-0.022  Sum_probs=90.4

Q ss_pred             eccCccceeEEEEEEcc--CCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeEEEEEeccCc
Q psy8006          12 INDMGKYATVRRCRDRK--NGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLLELLTS   89 (126)
Q Consensus        12 ~lg~g~~~~v~~~~~~~--~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~~lv~e~~~~   89 (126)
                      .||+|+||.||++....  ....+++|.+..... ......+.+|+.++..++| ||++++++.+......+++|||+++
T Consensus         2 ~lg~G~~g~v~~~~~~~~~~~~~~~~k~~~~~~~-~~~~~~~~~e~~~~~~l~h-~~iv~~~~~~~~~~~~~lv~e~~~~   79 (268)
T cd05086           2 EIGNGWFGKVLLSEIYTDTGVARVVVKELKANAS-SKEQNEFLQQGDPYRILQH-PNILQCLGQCVEAIPYLLVFEYCEL   79 (268)
T ss_pred             cCCCCcCceEEEEEEEcCCCcceEEEEEecCCCC-hHHHHHHHHHHHHHhccCC-cchhheEEEecCCCccEEEEecCCC
Confidence            58999999999987432  233566776654332 2234468999999999998 9999999999988899999999999


Q ss_pred             ccHHHHHHhc----CCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          90 AVDSKIRESF----GSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        90 ~~L~~~~~~~----~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      ++|.+++...    ..+++..+..++.|++.|++|||+.++
T Consensus        80 ~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i  120 (268)
T cd05086          80 GDLKSYLSQEQWHRRNSQLLLLQRMACEIAAGVTHMHKHNF  120 (268)
T ss_pred             CcHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHCCe
Confidence            9999888653    246677788999999999999998763

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage

>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3

Probab=99.76  E-value=4.4e-17  Score=107.48  Aligned_cols=119  Identities=10%  Similarity=0.092  Sum_probs=96.3

Q ss_pred             cccceeeccCccceeEEEEEEccC-------CcEEEEEEeecCCCCchhHHHHHHHHHHHHHh-cCCCCceeeeeeeEeC
Q psy8006           6 NIISSIINDMGKYATVRRCRDRKN-------GTQYAAKFLRKKRRSTDLKAEILHEVAVLEAC-RCNSRIVQLHQVFESS   77 (126)
Q Consensus         6 ~~~~~~~lg~g~~~~v~~~~~~~~-------~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~-~~~~~iv~l~~~~~~~   77 (126)
                      .|...+.||+|+||.||.+.+...       ...+|+|.+..... ......+.+|+.++.++ +| |||+++++.+...
T Consensus        13 ~~~i~~~ig~G~~g~v~~~~~~~~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~E~~~l~~l~~h-~~iv~~~~~~~~~   90 (334)
T cd05100          13 RLTLGKPLGEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDDAT-DKDLSDLVSEMEMMKMIGKH-KNIINLLGACTQD   90 (334)
T ss_pred             HeeecceeccccCCcEEEEEEeccCCccCCcceeEEEEEcccccC-HHHHHHHHHHHHHHHhhcCC-CCeeeeeEEEccC
Confidence            356678999999999999976432       23689998875432 23345688999999999 56 9999999999988


Q ss_pred             CeEEEEEeccCcccHHHHHHhcC----------------CCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          78 HDMILLLELLTSAVDSKIRESFG----------------SKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        78 ~~~~lv~e~~~~~~L~~~~~~~~----------------~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      +..++++||+++++|.+++....                .++...+..++.|++.|++|||+.++
T Consensus        91 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~gi  155 (334)
T cd05100          91 GPLYVLVEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLVSCAYQVARGMEYLASQKC  155 (334)
T ss_pred             CceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence            89999999999999998886421                36778888999999999999998764

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional

Probab=99.76  E-value=1.6e-17  Score=122.08  Aligned_cols=107  Identities=17%  Similarity=0.116  Sum_probs=92.6

Q ss_pred             ccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeEEEEEec
Q psy8006           7 IISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLLEL   86 (126)
Q Consensus         7 ~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~~lv~e~   86 (126)
                      +...+++|+|+||.||+|.+..++..+|+|.+.....      ....|+..+++++| |||+++++++..++..|+||||
T Consensus       692 ~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~------~~~~~~~~l~~l~H-pnIv~~~~~~~~~~~~~lv~Ey  764 (968)
T PLN00113        692 LKEENVISRGKKGASYKGKSIKNGMQFVVKEINDVNS------IPSSEIADMGKLQH-PNIVKLIGLCRSEKGAYLIHEY  764 (968)
T ss_pred             CCcccEEccCCCeeEEEEEECCCCcEEEEEEccCCcc------ccHHHHHHHhhCCC-CCcceEEEEEEcCCCCEEEEeC
Confidence            4456789999999999999988999999998864321      12345788999998 9999999999998999999999


Q ss_pred             cCcccHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhhc
Q psy8006          87 LTSAVDSKIRESFGSKSESGVQNCLEPSISVFSSLSK  123 (126)
Q Consensus        87 ~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~l~~  123 (126)
                      +++++|.++++.   ++......++.|++.|++|||.
T Consensus       765 ~~~g~L~~~l~~---l~~~~~~~i~~~ia~~L~yLH~  798 (968)
T PLN00113        765 IEGKNLSEVLRN---LSWERRRKIAIGIAKALRFLHC  798 (968)
T ss_pred             CCCCcHHHHHhc---CCHHHHHHHHHHHHHHHHHhcc
Confidence            999999999864   7888899999999999999993

>KOG4279|consensus

Probab=99.76  E-value=3.9e-18  Score=118.81  Aligned_cols=114  Identities=18%  Similarity=0.191  Sum_probs=101.0

Q ss_pred             eeeccCccceeEEEEEEccCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeEEEEEeccCc
Q psy8006          10 SIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLLELLTS   89 (126)
Q Consensus        10 ~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~~lv~e~~~~   89 (126)
                      .-+||+|.||+||-|++..+....|||.+....  +...+.+..|+.+.+.++| .|||++.+.+..++++-|.||-.+|
T Consensus       580 rvVLGKGTYG~VYA~RD~~tqvrIaIKEIpekd--sr~~QPLhEEIaLH~~LrH-kNIVrYLGs~senGf~kIFMEqVPG  656 (1226)
T KOG4279|consen  580 RVVLGKGTYGTVYAARDMDTQVRIAIKEIPEKD--SREVQPLHEEIALHSTLRH-KNIVRYLGSVSENGFFKIFMEQVPG  656 (1226)
T ss_pred             eEEeecCceeEEEeeccccceeEEEeeeccccc--chhhccHHHHHHHHHHHhh-HhHHHHhhccCCCCeEEEEeecCCC
Confidence            448999999999999999999999999997543  3344568899999999999 9999999999999999999999999


Q ss_pred             ccHHHHHHhc-CCC--CHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          90 AVDSKIRESF-GSK--SESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        90 ~~L~~~~~~~-~~~--~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      |+|.+++..+ +++  .|..+.++.+||++++.|||+..|
T Consensus       657 GSLSsLLrskWGPlKDNEstm~fYtkQILeGLkYLHen~I  696 (1226)
T KOG4279|consen  657 GSLSSLLRSKWGPLKDNESTMNFYTKQILEGLKYLHENKI  696 (1226)
T ss_pred             CcHHHHHHhccCCCccchhHHHHHHHHHHHHhhhhhhcce
Confidence            9999999875 455  889999999999999999998754

>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases

Probab=99.76  E-value=7.8e-17  Score=103.81  Aligned_cols=117  Identities=18%  Similarity=0.190  Sum_probs=95.9

Q ss_pred             cceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhc---CCCCceeeeeeeEeCCe-----
Q psy8006           8 ISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACR---CNSRIVQLHQVFESSHD-----   79 (126)
Q Consensus         8 ~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~---~~~~iv~l~~~~~~~~~-----   79 (126)
                      ...+.||+|+||.||++.+..++..+|+|.+............+.+|+.++..++   | ||++++.+.+...+.     
T Consensus         2 ~~~~~l~~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h-~~i~~~~~~~~~~~~~~~~~   80 (287)
T cd07838           2 EELAEIGEGAYGTVYKARDLNTGRFVALKKVRVPLSEEGIPLSTLREIALLKQLESFEH-PNIVRLLDVCHGPRTDRELK   80 (287)
T ss_pred             eEEEEecccCceEEEEEEECCCCCEEEEEEeccccccchhhhhHHHHHHHHHHhhccCC-CCcceEEEEEeeccCCCCce
Confidence            4567899999999999999888999999999865543333345667888777764   6 999999999987766     


Q ss_pred             EEEEEeccCcccHHHHHHhc--CCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          80 MILLLELLTSAVDSKIRESF--GSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        80 ~~lv~e~~~~~~L~~~~~~~--~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      .+++||++.+ +|.+++...  ..+++..+..++.|++.|+.|||+.++
T Consensus        81 ~~l~~e~~~~-~l~~~l~~~~~~~l~~~~~~~~~~~i~~al~~LH~~~i  128 (287)
T cd07838          81 LTLVFEHVDQ-DLATYLSKCPKPGLPPETIKDLMRQLLRGVDFLHSHRI  128 (287)
T ss_pred             eEEEehhccc-CHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence            9999999986 487777653  258999999999999999999998763

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both

>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2

Probab=99.76  E-value=3e-17  Score=105.79  Aligned_cols=121  Identities=12%  Similarity=0.075  Sum_probs=99.4

Q ss_pred             cccccceeeccCccceeEEEEEEccC-----CcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCC
Q psy8006           4 IKNIISSIINDMGKYATVRRCRDRKN-----GTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSH   78 (126)
Q Consensus         4 ~~~~~~~~~lg~g~~~~v~~~~~~~~-----~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~   78 (126)
                      +..|...+.||+|+||.||+|....+     +..+|+|.+..... ......+.+|+.++..++| |||+++++.+....
T Consensus         4 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~e~~~~~~l~h-~~iv~~~~~~~~~~   81 (283)
T cd05091           4 LSTVRFMEELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKAE-GPLREEFKHEAMMRSRLQH-PNIVCLLGVVTKEQ   81 (283)
T ss_pred             HHHHHHHHHhCCCCCCeEEEEEEecCCCCCceeEEEEEEccCCCC-HHHHHHHHHHHHHHhcCCC-CCcCeEEEEEcCCC
Confidence            44566778899999999999987543     46899999975432 2334468899999999998 99999999999888


Q ss_pred             eEEEEEeccCcccHHHHHHh----------------cCCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          79 DMILLLELLTSAVDSKIRES----------------FGSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        79 ~~~lv~e~~~~~~L~~~~~~----------------~~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      ..++++||+.+++|.+++..                +..++...+..++.|++.|++|||+.++
T Consensus        82 ~~~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ql~~aL~~lH~~gi  145 (283)
T cd05091          82 PLSMIFSYCSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADFVHIVTQIAAGMEFLSSHHV  145 (283)
T ss_pred             ceEEEEEcCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHcCc
Confidence            99999999999999888742                1247888899999999999999998764

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein

Probab=99.76  E-value=4.8e-17  Score=106.28  Aligned_cols=109  Identities=10%  Similarity=0.097  Sum_probs=93.3

Q ss_pred             cceeEEEEEEccCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeEEEEEeccCcccHHHHH
Q psy8006          17 KYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLLELLTSAVDSKIR   96 (126)
Q Consensus        17 ~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~~lv~e~~~~~~L~~~~   96 (126)
                      +++.|+.+....++..+|+|.+............+.+|+.++..++| ||++++++.+...+..+++|||+++++|.+++
T Consensus        12 ~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~Ei~~l~~l~h-~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~l   90 (314)
T cd08216          12 DLMIVHLAKHKPTNTLVAVKKINLDSCSKEDLKLLQQEIITSRQLQH-PNILPYVTSFIVDSELYVVSPLMAYGSCEDLL   90 (314)
T ss_pred             CCceEEEEEecCCCCEEEEEEEeccccchhHHHHHHHHHHHHHhcCC-cchhhhhheeecCCeEEEEEeccCCCCHHHHH
Confidence            45567777777789999999998764444445579999999999998 99999999999999999999999999998888


Q ss_pred             Hhc--CCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          97 ESF--GSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        97 ~~~--~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      ...  ..+++..+..++.|++.|++|||+.++
T Consensus        91 ~~~~~~~~~~~~~~~~~~~l~~~L~~LH~~~i  122 (314)
T cd08216          91 KTHFPEGLPELAIAFILKDVLNALDYIHSKGF  122 (314)
T ss_pred             HHhcccCCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence            753  468999999999999999999998764

Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc

>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase)

Probab=99.76  E-value=5.9e-17  Score=104.29  Aligned_cols=120  Identities=12%  Similarity=0.020  Sum_probs=98.3

Q ss_pred             ccccceeeccCccceeEEEEEEcc----CCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEe-CCe
Q psy8006           5 KNIISSIINDMGKYATVRRCRDRK----NGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFES-SHD   79 (126)
Q Consensus         5 ~~~~~~~~lg~g~~~~v~~~~~~~----~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~-~~~   79 (126)
                      ++|...+.||+|+||.||.|.+..    ++..+++|.+.... .......+.+|+.++..++| ||++++++.+.. +..
T Consensus         6 ~~~~~~~~i~~g~~g~V~~~~~~~~~~~~~~~v~~k~~~~~~-~~~~~~~~~~e~~~l~~l~h-~ni~~~~~~~~~~~~~   83 (280)
T cd05043           6 DRVTLSDLLQEGTFGRIFYGILIDEKPGKEEEVFVKTVKDHA-SEIQVTLLLQESCLLYGLSH-QNILPILHVCIEDGEP   83 (280)
T ss_pred             hheEEeeeecccCCceEEEEEEecCCCCceeEEEEEEccCCC-CHHHHHHHHHHHHHHHhCCC-CCCCeEEEEEecCCCC
Confidence            467778999999999999999865    35678999886432 22334458899999999988 999999998765 467


Q ss_pred             EEEEEeccCcccHHHHHHhc--------CCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          80 MILLLELLTSAVDSKIRESF--------GSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        80 ~~lv~e~~~~~~L~~~~~~~--------~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      .+++++++++++|.+++...        ..+++..+..++.|++.|++|||+.++
T Consensus        84 ~~~~~~~~~~~~L~~~l~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i  138 (280)
T cd05043          84 PFVLYPYMNWGNLKLFLQQCRLGEANNPQALSTQQLVHMAIQIACGMSYLHKRGV  138 (280)
T ss_pred             CEEEEEcCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHHCCE
Confidence            89999999999998888642        358899999999999999999998763

Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It

>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3

Probab=99.75  E-value=5.2e-17  Score=104.66  Aligned_cols=119  Identities=13%  Similarity=0.070  Sum_probs=95.3

Q ss_pred             ccccceeeccCccceeEEEEEEccCCc----EEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeE
Q psy8006           5 KNIISSIINDMGKYATVRRCRDRKNGT----QYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDM   80 (126)
Q Consensus         5 ~~~~~~~~lg~g~~~~v~~~~~~~~~~----~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~   80 (126)
                      ..|...+.||+|+||.||+|....++.    .+++|.+.... ......++..|+..+..+.| ||++++++.+. ....
T Consensus         7 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~~~~~~~~k~~~~~~-~~~~~~~~~~~~~~l~~l~h-~~iv~~~~~~~-~~~~   83 (279)
T cd05111           7 TELRKLKLLGSGVFGTVHKGIWIPEGDSIKIPVAIKTIQDRS-GRQTFQEITDHMLAMGSLDH-AYIVRLLGICP-GASL   83 (279)
T ss_pred             hhceeccccCccCCcceEEEEEcCCCCceeeEEEEeeccccc-chHHHHHHHHHHHHHhcCCC-CCcceEEEEEC-CCcc
Confidence            456667899999999999999877665    46777775332 12233457778888889998 99999999875 4557


Q ss_pred             EEEEeccCcccHHHHHHh-cCCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          81 ILLLELLTSAVDSKIRES-FGSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        81 ~lv~e~~~~~~L~~~~~~-~~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      ++++|++++++|.+++.. ...+++..+..++.|++.|++|||+.++
T Consensus        84 ~~i~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i  130 (279)
T cd05111          84 QLVTQLSPLGSLLDHVRQHRDSLDPQRLLNWCVQIAKGMYYLEEHRM  130 (279)
T ss_pred             EEEEEeCCCCcHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCE
Confidence            889999999999998865 4578999999999999999999998763

Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r

>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase

Probab=99.75  E-value=2.4e-17  Score=109.08  Aligned_cols=119  Identities=17%  Similarity=0.162  Sum_probs=99.4

Q ss_pred             ccccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCe-----
Q psy8006           5 KNIISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHD-----   79 (126)
Q Consensus         5 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~-----   79 (126)
                      ++|...+.||+|++|.||++.+..++..+|+|.+............+.+|+.+++++.| ||++++.+.+...+.     
T Consensus        15 ~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h-~~iv~~~~~~~~~~~~~~~~   93 (343)
T cd07851          15 DRYQNLSPVGSGAYGQVCSAFDTKTGRKVAIKKLSRPFQSAIHAKRTYRELRLLKHMDH-ENVIGLLDVFTPASSLEDFQ   93 (343)
T ss_pred             CceEEEEEeccCCceEEEEEEECCCCcEEEEEecccccchhhHHHHHHHHHHHHHhccC-CCHHHHHHHhhccccccccc
Confidence            45677889999999999999999999999999987654333334457889999999988 999999887765544     


Q ss_pred             -EEEEEeccCcccHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          80 -MILLLELLTSAVDSKIRESFGSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        80 -~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                       .++++|++.+ +|.+++.. ..+++..+..++.|++.|++|||+.++
T Consensus        94 ~~~lv~e~~~~-~L~~~~~~-~~l~~~~~~~~~~ql~~aL~~LH~~gi  139 (343)
T cd07851          94 DVYLVTHLMGA-DLNNIVKC-QKLSDDHIQFLVYQILRGLKYIHSAGI  139 (343)
T ss_pred             cEEEEEecCCC-CHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence             8999999854 68888875 569999999999999999999999764

Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK

>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase

Probab=99.75  E-value=5.7e-17  Score=103.40  Aligned_cols=117  Identities=13%  Similarity=0.129  Sum_probs=96.6

Q ss_pred             cccccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeEEEE
Q psy8006           4 IKNIISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILL   83 (126)
Q Consensus         4 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~~lv   83 (126)
                      ...|...+.||+|+||.||++.... +..+++|.+....   .....+.+|+.+++.++| ++++++++.+.. ...+++
T Consensus         5 ~~~~~~~~~lg~g~~~~vy~~~~~~-~~~~~iK~~~~~~---~~~~~~~~e~~~l~~l~~-~~i~~~~~~~~~-~~~~~v   78 (260)
T cd05073           5 RESLKLEKKLGAGQFGEVWMATYNK-HTKVAVKTMKPGS---MSVEAFLAEANVMKTLQH-DKLVKLHAVVTK-EPIYII   78 (260)
T ss_pred             ccceeEEeEecCccceEEEEEEecC-CccEEEEecCCCh---hHHHHHHHHHHHHHhcCC-CCcceEEEEEcC-CCeEEE
Confidence            3567778999999999999997653 4568999886532   223468899999999998 999999998876 778999


Q ss_pred             EeccCcccHHHHHHhc--CCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          84 LELLTSAVDSKIRESF--GSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        84 ~e~~~~~~L~~~~~~~--~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      |||+++++|.+++...  ..++...+..++.|++.|++|||+.++
T Consensus        79 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~i  123 (260)
T cd05073          79 TEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNY  123 (260)
T ss_pred             EEeCCCCcHHHHHHhCCccccCHHHHHHHHHHHHHHHHHHHhCCc
Confidence            9999999999888652  357888899999999999999998763

Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa

>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6

Probab=99.75  E-value=8.5e-17  Score=105.17  Aligned_cols=112  Identities=19%  Similarity=0.191  Sum_probs=90.1

Q ss_pred             ceeeccCccceeEEEEEEc--cCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeE--eCCeEEEEE
Q psy8006           9 SSIINDMGKYATVRRCRDR--KNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFE--SSHDMILLL   84 (126)
Q Consensus         9 ~~~~lg~g~~~~v~~~~~~--~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~--~~~~~~lv~   84 (126)
                      .+..||+|+||.||+|...  .++..+|+|.+.....    ...+.+|+.++..++| ||++++++.+.  .+...++++
T Consensus         5 ~g~~lG~G~~g~Vy~~~~~~~~~~~~~a~k~~~~~~~----~~~~~~E~~~l~~l~h-~niv~~~~~~~~~~~~~~~lv~   79 (317)
T cd07867           5 EGCKVGRGTYGHVYKAKRKDGKDEKEYALKQIEGTGI----SMSACREIALLRELKH-PNVIALQKVFLSHSDRKVWLLF   79 (317)
T ss_pred             eceEeccCCCeeEEEEEecCCCccceEEEEEecCCCC----cHHHHHHHHHHHhCCC-CCeeeEEEEEeccCCCeEEEEE
Confidence            4568999999999999864  3567899998875432    2257789999999999 99999999885  355789999


Q ss_pred             eccCcccHHHHHHh---------cCCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          85 ELLTSAVDSKIRES---------FGSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        85 e~~~~~~L~~~~~~---------~~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      ||++++ |.+++..         ...+++..+..++.|++.|+.|||+.++
T Consensus        80 e~~~~~-l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i  129 (317)
T cd07867          80 DYAEHD-LWHIIKFHRASKANKKPMQLPRSMVKSLLYQILDGIHYLHANWV  129 (317)
T ss_pred             eeeCCc-HHHHHHhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhCCE
Confidence            999876 6665531         1258899999999999999999998763

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as

>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase

Probab=99.75  E-value=8.5e-17  Score=103.07  Aligned_cols=119  Identities=13%  Similarity=0.066  Sum_probs=97.2

Q ss_pred             ccccceeeccCccceeEEEEEEccC---CcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeEE
Q psy8006           5 KNIISSIINDMGKYATVRRCRDRKN---GTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMI   81 (126)
Q Consensus         5 ~~~~~~~~lg~g~~~~v~~~~~~~~---~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~~   81 (126)
                      .++...+.||+|+||.||+|.+...   ...+++|....... ....+.+.+|+.+++.++| ||++++++.+.. +..+
T Consensus         6 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~v~ik~~~~~~~-~~~~~~~~~e~~~l~~~~h-~~i~~~~~~~~~-~~~~   82 (270)
T cd05056           6 EDITLGRCIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCTS-PSVREKFLQEAYIMRQFDH-PHIVKLIGVITE-NPVW   82 (270)
T ss_pred             hhceeeeeeCCccceeEEEEEEecCCCCCcceEEEecCCcCC-HHHHHHHHHHHHHHHhCCC-CchhceeEEEcC-CCcE
Confidence            3566788999999999999987543   34688998865432 2334468899999999998 999999998764 5578


Q ss_pred             EEEeccCcccHHHHHHhc-CCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          82 LLLELLTSAVDSKIRESF-GSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        82 lv~e~~~~~~L~~~~~~~-~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      ++||++++++|.+++... ..++...+..++.|++.|++|||+.++
T Consensus        83 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~  128 (270)
T cd05056          83 IVMELAPLGELRSYLQVNKYSLDLASLILYSYQLSTALAYLESKRF  128 (270)
T ss_pred             EEEEcCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCe
Confidence            999999999999998764 358999999999999999999998763

Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions

>KOG0577|consensus

Probab=99.75  E-value=2.5e-18  Score=117.88  Aligned_cols=117  Identities=18%  Similarity=0.197  Sum_probs=100.4

Q ss_pred             ccceeeccCccceeEEEEEEccCCcEEEEEEeecCCC-CchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeEEEEEe
Q psy8006           7 IISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRR-STDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLLE   85 (126)
Q Consensus         7 ~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~-~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~~lv~e   85 (126)
                      |..-+.||-|+||.||-+.+..+...||||.+.-... +.+.++.+.+|+..++++.| ||++.+.++|-.....|+|||
T Consensus        28 f~dLrEIGHGSFGAVYfArd~~n~evVAIKKMsySGKQs~EKWqDIlKEVrFL~~l~H-PntieYkgCyLre~TaWLVME  106 (948)
T KOG0577|consen   28 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDILKEVRFLRQLRH-PNTIEYKGCYLREHTAWLVME  106 (948)
T ss_pred             HHHHHHhcCCccceeEEeeccCccceeeeeeccccccccHHHHHHHHHHHHHHHhccC-CCcccccceeeccchHHHHHH
Confidence            4455689999999999999999999999999986554 33456779999999999999 999999999999999999999


Q ss_pred             ccCcccHHHHHH-hcCCCCHHHHHHHHHHHHHHHHhhhccC
Q psy8006          86 LLTSAVDSKIRE-SFGSKSESGVQNCLEPSISVFSSLSKFE  125 (126)
Q Consensus        86 ~~~~~~L~~~~~-~~~~~~~~~~~~~~~qi~~~l~~l~~~~  125 (126)
                      ||-|. ..+++. .+.++.+.++..+..+.+.|++|||...
T Consensus       107 YClGS-AsDlleVhkKplqEvEIAAi~~gaL~gLaYLHS~~  146 (948)
T KOG0577|consen  107 YCLGS-ASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSHN  146 (948)
T ss_pred             HHhcc-HHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHhh
Confidence            99886 455553 3357899999999999999999999864

>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases

Probab=99.75  E-value=6.5e-17  Score=106.73  Aligned_cols=119  Identities=14%  Similarity=0.186  Sum_probs=98.2

Q ss_pred             cccccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeC-----C
Q psy8006           4 IKNIISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESS-----H   78 (126)
Q Consensus         4 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~-----~   78 (126)
                      .++|...+.||+|++|.||.+.+..++..+|+|.+..... ......+.+|+.++..++| ||++++++.+...     .
T Consensus         4 ~~~y~i~~~lg~G~~g~vy~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~E~~~l~~l~h-~niv~~~~~~~~~~~~~~~   81 (336)
T cd07849           4 GPRYQNLSYIGEGAYGMVCSATHKPTGVKVAIKKISPFEH-QTFCQRTLREIKILRRFKH-ENIIGILDIIRPPSFESFN   81 (336)
T ss_pred             ccceEEEEEEEecCCeEEEEEEEcCCCCeEEEEEeccccc-chhHHHHHHHHHHHHhCCC-CCcCchhheeecccccccc
Confidence            3567888999999999999999999999999999864322 2233457889999999998 9999999876543     3


Q ss_pred             eEEEEEeccCcccHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          79 DMILLLELLTSAVDSKIRESFGSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        79 ~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      ..++++|++++. +.+++.. ..+++..+..++.|++.|++|||+.++
T Consensus        82 ~~~lv~e~~~~~-l~~~~~~-~~l~~~~~~~i~~ql~~aL~~LH~~~i  127 (336)
T cd07849          82 DVYIVQELMETD-LYKLIKT-QHLSNDHIQYFLYQILRGLKYIHSANV  127 (336)
T ss_pred             eEEEEehhcccC-HHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCe
Confidence            589999999864 7776654 569999999999999999999998764

Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase

>KOG0608|consensus

Probab=99.75  E-value=4.7e-18  Score=117.31  Aligned_cols=119  Identities=16%  Similarity=0.196  Sum_probs=105.4

Q ss_pred             ccceeeccCccceeEEEEEEccCCcEEEEEEeecCCC-CchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeEEEEEe
Q psy8006           7 IISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRR-STDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLLE   85 (126)
Q Consensus         7 ~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~-~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~~lv~e   85 (126)
                      |+..+.||-|+||.|+++....+...||.|.+++... .......+..|-++|...++ ++||+||..|.+.+.+|.|||
T Consensus       631 Fvkik~iGvGAFGeV~Lv~KvDT~~lYAmKTLrKaDVl~rnQvaHVKAERDILAEADn-~WVVrLyySFQDkdnLYFVMd  709 (1034)
T KOG0608|consen  631 FVKIKTIGVGAFGEVCLVRKVDTRALYAMKTLRKADVLMRNQVAHVKAERDILAEADN-EWVVRLYYSFQDKDNLYFVMD  709 (1034)
T ss_pred             eEEEeeecccccceeEEEeecchhhHHHHhhhHHHHHHhhhhhhhhhhhhhhHhhcCC-cceEEEEEEeccCCceEEEEe
Confidence            6678899999999999999999999999999987633 22222347788899999988 999999999999999999999


Q ss_pred             ccCcccHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          86 LLTSAVDSKIRESFGSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        86 ~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      |.+||++..++-+-+.|.|..+++++..+..|+++.|++|.
T Consensus       710 YIPGGDmMSLLIrmgIFeE~LARFYIAEltcAiesVHkmGF  750 (1034)
T KOG0608|consen  710 YIPGGDMMSLLIRMGIFEEDLARFYIAELTCAIESVHKMGF  750 (1034)
T ss_pred             ccCCccHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHhccc
Confidence            99999999988888899999999999999999999999973

>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2

Probab=99.74  E-value=1.4e-16  Score=104.05  Aligned_cols=118  Identities=18%  Similarity=0.193  Sum_probs=97.8

Q ss_pred             ccceeeccCccceeEEEEEEccCCcEEEEEEeecCCC-CchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeEEEEEe
Q psy8006           7 IISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRR-STDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLLE   85 (126)
Q Consensus         7 ~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~-~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~~lv~e   85 (126)
                      |...+.||+|++|.||++.+..++..+++|.+..... .......+.+|+.+++.++| +|++++.+++..+...++|+|
T Consensus        17 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h-~~i~~~~~~~~~~~~~~lv~e   95 (308)
T cd06634          17 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRH-PNTIQYRGCYLREHTAWLVME   95 (308)
T ss_pred             HHHHHheeeCCCEEEEEEEEcCCCcEEEEEEEecccccChHHHHHHHHHHHHHHhCCC-CCcccEEEEEEcCCeeEEEEE
Confidence            4456689999999999999998899999999875432 22334467889999999998 999999999999999999999


Q ss_pred             ccCcccHHHHHH-hcCCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          86 LLTSAVDSKIRE-SFGSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        86 ~~~~~~L~~~~~-~~~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      |+.+ ++.+++. ....+++..+..++.|++.++.|||..++
T Consensus        96 ~~~~-~l~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~~i  136 (308)
T cd06634          96 YCLG-SASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHNM  136 (308)
T ss_pred             ccCC-CHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCc
Confidence            9975 4665554 34568999999999999999999998763

Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin

>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase

Probab=99.74  E-value=1.4e-16  Score=101.39  Aligned_cols=117  Identities=18%  Similarity=0.167  Sum_probs=97.0

Q ss_pred             ccccccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeE-eCCeEE
Q psy8006           3 NIKNIISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFE-SSHDMI   81 (126)
Q Consensus         3 ~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~-~~~~~~   81 (126)
                      ++.+|...+.+|+|++|.||++...  +..+++|.+....    ..+.+.+|+.++..++| ++++++++.+. ..+..+
T Consensus         4 ~~~~~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~~----~~~~~~~e~~~l~~l~~-~~i~~~~~~~~~~~~~~~   76 (256)
T cd05082           4 NMKELKLLQTIGKGEFGDVMLGDYR--GNKVAVKCIKNDA----TAQAFLAEASVMTQLRH-SNLVQLLGVIVEEKGGLY   76 (256)
T ss_pred             cHHhCeeeeeecccCCCeEEEEEEc--CCcEEEEEeCCCc----hHHHHHHHHHHHHhCCC-CCeeeEEEEEEcCCCceE
Confidence            3456778899999999999999764  6779999886432    23468899999999998 99999998764 456789


Q ss_pred             EEEeccCcccHHHHHHhcC--CCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          82 LLLELLTSAVDSKIRESFG--SKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        82 lv~e~~~~~~L~~~~~~~~--~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      +++||+++++|.++++...  .+++..+..++.|++.+++|||..++
T Consensus        77 lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i  123 (256)
T cd05082          77 IVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEANNF  123 (256)
T ss_pred             EEEECCCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCE
Confidence            9999999999998887543  48889999999999999999998763

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re

>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase

Probab=99.74  E-value=7.6e-17  Score=102.46  Aligned_cols=116  Identities=16%  Similarity=0.151  Sum_probs=97.0

Q ss_pred             ccccccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeEEE
Q psy8006           3 NIKNIISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMIL   82 (126)
Q Consensus         3 ~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~~l   82 (126)
                      +..+|...+.||+|+||.||.+..  ++..+|+|.++...    ....+.+|+.++..++| ||++++++.+... ..++
T Consensus         4 ~~~~~~~~~~lg~g~~g~v~~~~~--~~~~~~iK~~~~~~----~~~~~~~e~~~l~~~~~-~~i~~~~~~~~~~-~~~~   75 (254)
T cd05083           4 NLQKLTLGEIIGEGEFGAVLQGEY--TGQKVAVKNIKCDV----TAQAFLEETAVMTKLHH-KNLVRLLGVILHN-GLYI   75 (254)
T ss_pred             cHHHceeeeeeccCCCCceEeccc--CCCceEEEeecCcc----hHHHHHHHHHHHHhCCC-CCcCeEEEEEcCC-CcEE
Confidence            456778889999999999998863  67789999886532    23468899999999998 9999999988654 4789


Q ss_pred             EEeccCcccHHHHHHhc--CCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          83 LLELLTSAVDSKIRESF--GSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        83 v~e~~~~~~L~~~~~~~--~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      +|||+++++|.+++...  ..+++..+..++.|++.|+.|||+.++
T Consensus        76 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~~  121 (254)
T cd05083          76 VMELMSKGNLVNFLRTRGRALVSVIQLLQFSLDVAEGMEYLESKKL  121 (254)
T ss_pred             EEECCCCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHhCCe
Confidence            99999999999888753  358899999999999999999998763

Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki

>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins

Probab=99.74  E-value=5.7e-17  Score=102.32  Aligned_cols=103  Identities=18%  Similarity=0.154  Sum_probs=87.8

Q ss_pred             ccceeEEEEEEccCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeEEEEEeccCcccHHHH
Q psy8006          16 GKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLLELLTSAVDSKI   95 (126)
Q Consensus        16 g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~~lv~e~~~~~~L~~~   95 (126)
                      |.++.||.+.+..++..+|+|.+....       ...+|...+....| ||++++++.+......+++|||+++++|.++
T Consensus         4 g~~~~v~~~~~~~~~~~~~~K~i~~~~-------~~~~~~~~~~~~~~-~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~   75 (237)
T cd05576           4 GVIDKVLLVMDTRTQQTFILKGLRKSS-------EYSRERLTIIPHCV-PNMVCLHKYIVSEDSVFLVLQHAEGGKLWSH   75 (237)
T ss_pred             cccceEEEEEEccCCcEEEEEeecchh-------hhhhHHHHHHhcCC-CceeehhhheecCCeEEEEEecCCCCCHHHH
Confidence            789999999999999999999997642       12234444445556 9999999999989999999999999999988


Q ss_pred             HHhcCCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          96 RESFGSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        96 ~~~~~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      +.+...+++..+..++.|+++|++|||+.++
T Consensus        76 l~~~~~l~~~~~~~~~~ql~~~l~~lH~~~i  106 (237)
T cd05576          76 ISKFLNIPEECVKRWAAEMVVALDALHREGI  106 (237)
T ss_pred             HHHhcCCCHHHHHHHHHHHHHHHHHHHhCCe
Confidence            8776779999999999999999999999764

Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha

>KOG2345|consensus

Probab=99.74  E-value=1e-17  Score=103.99  Aligned_cols=120  Identities=18%  Similarity=0.094  Sum_probs=102.5

Q ss_pred             ccccccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEe-----C
Q psy8006           3 NIKNIISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFES-----S   77 (126)
Q Consensus         3 ~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~-----~   77 (126)
                      |.+.|...+.||+|+|+.|+.+++..++..+|+|.+....  .+.....++|++..++++| ||++++.++...     .
T Consensus        19 n~~Ryri~~~LgeGGfsfv~LV~~~s~~~~YAlKkI~c~~--~~~~e~~~rEid~~rkf~s-~~vl~l~dh~l~~~~D~~   95 (302)
T KOG2345|consen   19 NNKRYRIQRLLGEGGFSFVDLVKGLSTGHLYALKKILCHS--QEDIEEALREIDNHRKFNS-PNVLRLVDHQLREEKDGK   95 (302)
T ss_pred             cCceEEEeeeecCCCceeeeeecccCcccchhhheeeccc--hHHHHHHHHHHHHHHhhCC-cchHHHHHHHHHhhccCc
Confidence            3456888899999999999999999999999999998664  2345568999999999999 999999887642     2


Q ss_pred             CeEEEEEeccCcccHHHHHHh---c-CCCCHHHHHHHHHHHHHHHHhhhccC
Q psy8006          78 HDMILLLELLTSAVDSKIRES---F-GSKSESGVQNCLEPSISVFSSLSKFE  125 (126)
Q Consensus        78 ~~~~lv~e~~~~~~L~~~~~~---~-~~~~~~~~~~~~~qi~~~l~~l~~~~  125 (126)
                      ...||+++|...|+|.+.+.+   + ..++|.+++.++.++.+|+++||..+
T Consensus        96 ~~~yll~Pyy~~Gsl~d~i~~~k~kg~~~sE~~iL~if~gic~gL~~lH~~~  147 (302)
T KOG2345|consen   96 HEAYLLLPYYKRGSLLDEIERLKIKGNFVSEAQILWIFLGICRGLEALHEKE  147 (302)
T ss_pred             eeEEEEeehhccccHHHHHHHHhhcCCccCHHHHHHHHHHHHHHHHHHhccC
Confidence            358999999999999887753   2 37999999999999999999999876

>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases

Probab=99.74  E-value=5.6e-17  Score=104.44  Aligned_cols=116  Identities=20%  Similarity=0.210  Sum_probs=96.7

Q ss_pred             cceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhc-CCCCceeeeeeeEeCCeEEEEEec
Q psy8006           8 ISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACR-CNSRIVQLHQVFESSHDMILLLEL   86 (126)
Q Consensus         8 ~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~-~~~~iv~l~~~~~~~~~~~lv~e~   86 (126)
                      ...+.||+|++|.||+|....++..+++|.+...... .......+|+..+.+++ | |+++++++.+..++..+++||+
T Consensus         2 ~~~~~ig~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~-~~~~~~~~e~~~l~~~~~h-~~i~~~~~~~~~~~~~~lv~e~   79 (283)
T cd07830           2 KVIKQLGDGTFGSVYLARNKETGELVAIKKMKKKFYS-WEECMNLREVKSLRKLNEH-PNIVKLKEVFRENDELYFVFEY   79 (283)
T ss_pred             eeheeeccCCceEEEEEEECCCCcEEEEEEehhhccc-hhHHHHHHHHHHHHhccCC-CCchhHHHHhhcCCcEEEEEec
Confidence            4467899999999999999888999999998765432 11223567899999998 6 9999999999999999999999


Q ss_pred             cCcccHHHHHHhcC--CCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          87 LTSAVDSKIRESFG--SKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        87 ~~~~~L~~~~~~~~--~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      + ++++.+.+....  .+++..+..++.|++.++.|||+.++
T Consensus        80 ~-~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Lh~~~i  120 (283)
T cd07830          80 M-EGNLYQLMKDRKGKPFSESVIRSIIYQILQGLAHIHKHGF  120 (283)
T ss_pred             C-CCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHHCCc
Confidence            9 566877776543  78999999999999999999998763

Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili

>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11

Probab=99.74  E-value=4.7e-17  Score=103.70  Aligned_cols=119  Identities=16%  Similarity=0.103  Sum_probs=96.8

Q ss_pred             ccceeeccCccceeEEEEEEccCCcEEEEEEeecCCC---CchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeEEEE
Q psy8006           7 IISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRR---STDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILL   83 (126)
Q Consensus         7 ~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~---~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~~lv   83 (126)
                      |...+.||+|+||.||++.+...+...++|.+.....   .........+|+.++..++| ||++++++.+......+++
T Consensus         2 y~i~~~ig~g~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h-~~i~~~~~~~~~~~~~~lv   80 (260)
T cd08222           2 YILQQRLGKGSFGTVYLVKDKKAVAEERLKVLKEIPVGELNPNETVQANQEAQLLSKLDH-PAIVKFHASFLERDAFCII   80 (260)
T ss_pred             ceeeeeecCCCCceEEEEEecCCCCcceEEEeccccccccCcchHHHHHHHHHHHHhCCC-CcHHHHHHHHhcCCceEEE
Confidence            5567889999999999999887776666666554322   22233356778899999998 9999999999888889999


Q ss_pred             EeccCcccHHHHHHh----cCCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          84 LELLTSAVDSKIRES----FGSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        84 ~e~~~~~~L~~~~~~----~~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      +||+++++|..++..    ...+++..+..++.|++.|+.|||+.++
T Consensus        81 ~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i  127 (260)
T cd08222          81 TEYCEGRDLDCKLEELKHTGKTLSENQVCEWFIQLLLGVHYMHQRRI  127 (260)
T ss_pred             EEeCCCCCHHHHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCc
Confidence            999999999877753    3468999999999999999999998763

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check

>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3

Probab=99.73  E-value=1.4e-16  Score=102.09  Aligned_cols=118  Identities=15%  Similarity=0.082  Sum_probs=94.6

Q ss_pred             cceeeccCccceeEEEEEEc---cCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCC------
Q psy8006           8 ISSIINDMGKYATVRRCRDR---KNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSH------   78 (126)
Q Consensus         8 ~~~~~lg~g~~~~v~~~~~~---~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~------   78 (126)
                      ...+.||+|+||.||++...   .++..+|+|.+............+.+|+.++..++| ||++++++.+....      
T Consensus         2 ~~~~~ig~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h-~~i~~~~~~~~~~~~~~~~~   80 (273)
T cd05074           2 TLGRMLGKGEFGSVREAQLKSEDGSFQKVAVKMLKADIFSSSDIEEFLREAACMKEFDH-PNVIKLIGVSLRSRAKGRLP   80 (273)
T ss_pred             cchhcccCCCCCCEEeeEeeccCCCceEEEEEEeccccCChHHHHHHHHHHHHHhcCCC-CCcceEEEEEccCCCCCccc
Confidence            34678999999999999854   457889999997765544445568899999999998 99999999875432      


Q ss_pred             eEEEEEeccCcccHHHHHHhc------CCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          79 DMILLLELLTSAVDSKIRESF------GSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        79 ~~~lv~e~~~~~~L~~~~~~~------~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      ..+++++|+.+++|..++...      ..++...+..++.|++.|++|||+.++
T Consensus        81 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~i  134 (273)
T cd05074          81 IPMVILPFMKHGDLHTFLLMSRIGEEPFTLPLQTLVRFMIDIASGMEYLSSKNF  134 (273)
T ss_pred             ceEEEEecCCCCcHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCE
Confidence            247889999999997766321      247889999999999999999998763

Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac

>PTZ00284 protein kinase; Provisional

Probab=99.73  E-value=2.5e-16  Score=108.16  Aligned_cols=118  Identities=13%  Similarity=0.157  Sum_probs=92.3

Q ss_pred             ccccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcC-----CCCceeeeeeeEeC-C
Q psy8006           5 KNIISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRC-----NSRIVQLHQVFESS-H   78 (126)
Q Consensus         5 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~-----~~~iv~l~~~~~~~-~   78 (126)
                      .+|...+.||+|+||.||+|.+..++..||+|+++...   ........|+.++..+.+     +.+++.+.+++... .
T Consensus       129 ~~y~i~~~lG~G~fg~V~~a~~~~~~~~vAvK~i~~~~---~~~~~~~~e~~~l~~l~~~~~~~~~~i~~i~~~~~~~~~  205 (467)
T PTZ00284        129 QRFKILSLLGEGTFGKVVEAWDRKRKEYCAVKIVRNVP---KYTRDAKIEIQFMEKVRQADPADRFPLMKIQRYFQNETG  205 (467)
T ss_pred             CcEEEEEEEEeccCEEEEEEEEcCCCeEEEEEEEecch---hhHHHHHHHHHHHHHHhhcCcccCcceeeeEEEEEcCCc
Confidence            45677789999999999999999999999999997432   112245667777777654     24578888887654 4


Q ss_pred             eEEEEEeccCcccHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhhc-cCC
Q psy8006          79 DMILLLELLTSAVDSKIRESFGSKSESGVQNCLEPSISVFSSLSK-FET  126 (126)
Q Consensus        79 ~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~l~~-~~~  126 (126)
                      +.++||+++.+ +|.+++...+.+++..+..++.|++.||+|||. .++
T Consensus       206 ~~~iv~~~~g~-~l~~~l~~~~~l~~~~~~~i~~qi~~aL~yLH~~~gI  253 (467)
T PTZ00284        206 HMCIVMPKYGP-CLLDWIMKHGPFSHRHLAQIIFQTGVALDYFHTELHL  253 (467)
T ss_pred             eEEEEEeccCC-CHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhcCCe
Confidence            78999998854 477777776789999999999999999999996 453

>KOG1151|consensus

Probab=99.73  E-value=4.2e-18  Score=113.71  Aligned_cols=117  Identities=15%  Similarity=0.135  Sum_probs=101.4

Q ss_pred             ccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCchh-----HHHHHHHHHHHHHhcCCCCceeeeeeeE-eCCeE
Q psy8006           7 IISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDL-----KAEILHEVAVLEACRCNSRIVQLHQVFE-SSHDM   80 (126)
Q Consensus         7 ~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~-----~~~~~~e~~~l~~~~~~~~iv~l~~~~~-~~~~~   80 (126)
                      |+.-.+||+|+|+.||++.+...++.+|+|+-..+..+.+.     .+...+|..+.+.++| |.||++|+++. +.+..
T Consensus       465 YLlLhLLGrGGFSEVyKAFDl~EqRYvAvKIHqlNK~WrdEKKeNYhKHAcREyrIHKeLDH-pRIVKlYDyfslDtdsF  543 (775)
T KOG1151|consen  465 YLLLHLLGRGGFSEVYKAFDLTEQRYVAVKIHQLNKNWRDEKKENYHKHACREYRIHKELDH-PRIVKLYDYFSLDTDSF  543 (775)
T ss_pred             HHHHHHhccccHHHHHHhcccchhheeeEeeehhccchhhHhhhhHHHHHHHHHhhhhccCc-ceeeeeeeeeeeccccc
Confidence            55566899999999999999999999999988776554432     2346799999999999 99999999997 45578


Q ss_pred             EEEEeccCcccHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhhcc
Q psy8006          81 ILLLELLTSAVDSKIRESFGSKSESGVQNCLEPSISVFSSLSKF  124 (126)
Q Consensus        81 ~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~l~~~  124 (126)
                      +-|+|||+|.+|..+++....+++.+++.++.||+.||.||-+.
T Consensus       544 CTVLEYceGNDLDFYLKQhklmSEKEARSIiMQiVnAL~YLNEi  587 (775)
T KOG1151|consen  544 CTVLEYCEGNDLDFYLKQHKLMSEKEARSIIMQIVNALKYLNEI  587 (775)
T ss_pred             eeeeeecCCCchhHHHHhhhhhhHHHHHHHHHHHHHHHHHHhcc
Confidence            89999999999999999888999999999999999999999753

>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron

Probab=99.73  E-value=1.8e-16  Score=101.10  Aligned_cols=114  Identities=11%  Similarity=0.047  Sum_probs=90.7

Q ss_pred             eeccCccceeEEEEEEcc---CCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeE-eCCeEEEEEec
Q psy8006          11 IINDMGKYATVRRCRDRK---NGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFE-SSHDMILLLEL   86 (126)
Q Consensus        11 ~~lg~g~~~~v~~~~~~~---~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~-~~~~~~lv~e~   86 (126)
                      +.||+|+||.||+|....   .+..+|+|.+.... .......+.+|+.+++.++| ||++++++.+. .++..++++||
T Consensus         1 ~~lg~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~-~~~~~~~~~~e~~~l~~l~h-~~iv~~~~~~~~~~~~~~lv~e~   78 (262)
T cd05058           1 RVIGKGHFGCVYHGTLIDSDGQKIHCAVKSLNRIT-DLEEVEQFLKEGIIMKDFSH-PNVLSLLGICLPSEGSPLVVLPY   78 (262)
T ss_pred             CcccccCCceEEEEEEecCCCceEEEEEEecCccC-CHHHHHHHHHHHHHHccCCC-CCcceEEEEeecCCCCcEEEEec
Confidence            468999999999998643   34579999875432 22234468889999999998 99999999765 45568899999


Q ss_pred             cCcccHHHHHHhc-CCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          87 LTSAVDSKIRESF-GSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        87 ~~~~~L~~~~~~~-~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      +.+++|.+++... ..++...+..++.|++.|++|||+.++
T Consensus        79 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i  119 (262)
T cd05058          79 MKHGDLRNFIRSETHNPTVKDLIGFGLQVAKGMEYLASKKF  119 (262)
T ss_pred             CCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCc
Confidence            9999999988753 356777888999999999999998764

Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca

>KOG0666|consensus

Probab=99.73  E-value=5.1e-18  Score=108.61  Aligned_cols=115  Identities=18%  Similarity=0.205  Sum_probs=95.6

Q ss_pred             ccceeeccCccceeEEEEEEccCC----cEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEe-CCeEE
Q psy8006           7 IISSIINDMGKYATVRRCRDRKNG----TQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFES-SHDMI   81 (126)
Q Consensus         7 ~~~~~~lg~g~~~~v~~~~~~~~~----~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~-~~~~~   81 (126)
                      |.....||+|.+|.||+|....++    ..+|+|.+..+.-..+......||+.+++.++| ||++++...+.. +..++
T Consensus        26 ye~ig~Ig~GTYG~VykA~~~~~n~kr~k~yAiKkfk~~kd~tGiS~SAcREiaL~REl~h-~nvi~Lv~Vfl~~d~~v~  104 (438)
T KOG0666|consen   26 YEGIGKIGRGTYGKVYKAVRKNTNDKRTKEYAIKKFKGEKDGTGISMSACREIALLRELKH-PNVISLVKVFLSHDKKVW  104 (438)
T ss_pred             hhccceecccccceeeEeeeccCCcccchhhHHHHHhccCCCCCcCHHHHHHHHHHHHhcC-CcchhHHHHHhccCceEE
Confidence            444567999999999999654443    278999998775545555678899999999999 999999998876 77899


Q ss_pred             EEEeccCcccHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHhhhc
Q psy8006          82 LLLELLTSAVDSKIRESF-----GSKSESGVQNCLEPSISVFSSLSK  123 (126)
Q Consensus        82 lv~e~~~~~~L~~~~~~~-----~~~~~~~~~~~~~qi~~~l~~l~~  123 (126)
                      +++||++.+ |.++++..     ..++...+..+++||+.++.|||.
T Consensus       105 l~fdYAEhD-L~~II~fHr~~~~~~lp~~mvKsilwQil~Gv~YLH~  150 (438)
T KOG0666|consen  105 LLFDYAEHD-LWHIIKFHRASKAKQLPRSMVKSILWQILDGVHYLHS  150 (438)
T ss_pred             EEehhhhhh-HHHHHHHhccchhccCCHHHHHHHHHHHHhhhHHHhh
Confidence            999999999 77777632     368999999999999999999996

>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4

Probab=99.73  E-value=2.7e-16  Score=101.56  Aligned_cols=118  Identities=15%  Similarity=0.137  Sum_probs=96.7

Q ss_pred             cccccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeEEEE
Q psy8006           4 IKNIISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILL   83 (126)
Q Consensus         4 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~~lv   83 (126)
                      .+++...+.||+|+||.||++.+..++..+|+|.+...... .....+.+|+.++.++..|||++++++.+..++..+++
T Consensus         3 ~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~-~~~~~~~~e~~~l~~~~~~~~iv~~~~~~~~~~~~~~~   81 (288)
T cd06616           3 AEDLKDLGEIGRGAFGTVNKMLHKPSGTIMAVKRIRSTVDE-KEQKRLLMDLDVVMRSSDCPYIVKFYGALFREGDCWIC   81 (288)
T ss_pred             HHHhHHHHHhCCCCceEEEEEEECCCCCEEEEEEehhccCh-HHHHHHHHHHHHHHHhcCCCCEeeeeeEEecCCcEEEE
Confidence            35667778999999999999999999999999998865432 33446889999999997339999999999888899999


Q ss_pred             EeccCcccHHHH---HH--hcCCCCHHHHHHHHHHHHHHHHhhhc
Q psy8006          84 LELLTSAVDSKI---RE--SFGSKSESGVQNCLEPSISVFSSLSK  123 (126)
Q Consensus        84 ~e~~~~~~L~~~---~~--~~~~~~~~~~~~~~~qi~~~l~~l~~  123 (126)
                      ||+++.. +.++   +.  ....+++..+..++.|++.|++|||.
T Consensus        82 ~e~~~~~-l~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lh~  125 (288)
T cd06616          82 MELMDIS-LDKFYKYVYEVLKSVIPEEILGKIAVATVKALNYLKE  125 (288)
T ss_pred             EecccCC-HHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhh
Confidence            9998764 4332   22  23579999999999999999999985

Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates

>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10

Probab=99.73  E-value=4.4e-16  Score=99.68  Aligned_cols=117  Identities=16%  Similarity=0.198  Sum_probs=95.1

Q ss_pred             cccceeeccCccceeEEEEEEcc-CCcEEEEEEeecCCC--------CchhHHHHHHHHHHHHH-hcCCCCceeeeeeeE
Q psy8006           6 NIISSIINDMGKYATVRRCRDRK-NGTQYAAKFLRKKRR--------STDLKAEILHEVAVLEA-CRCNSRIVQLHQVFE   75 (126)
Q Consensus         6 ~~~~~~~lg~g~~~~v~~~~~~~-~~~~~aiK~~~~~~~--------~~~~~~~~~~e~~~l~~-~~~~~~iv~l~~~~~   75 (126)
                      +|...+.||+|+||.||.+.+.. .+..+|+|.+.....        .......+.+|+.++.+ ++| ||++++++.+.
T Consensus         1 ~y~~~~~ig~G~~~~v~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~~h-~~i~~~~~~~~   79 (269)
T cd08528           1 EYAVLEHLGSGAFGCVYKVRKKNNGQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVTIIKEQLRH-PNIVRYYKTFL   79 (269)
T ss_pred             CchhhhhhcCCCCceEEEEEEcCCCCceeeeeEeeccccccccccccchHHHHHHHHHHHHHhhcCCC-CCeeeEEeeEc
Confidence            35567789999999999999877 678899998875432        11223346778887776 566 99999999999


Q ss_pred             eCCeEEEEEeccCcccHHHHHHh----cCCCCHHHHHHHHHHHHHHHHhhhc
Q psy8006          76 SSHDMILLLELLTSAVDSKIRES----FGSKSESGVQNCLEPSISVFSSLSK  123 (126)
Q Consensus        76 ~~~~~~lv~e~~~~~~L~~~~~~----~~~~~~~~~~~~~~qi~~~l~~l~~  123 (126)
                      .++..+++|||+++++|.+++..    ...+++..+..++.|++.++.|||.
T Consensus        80 ~~~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~  131 (269)
T cd08528          80 ENDRLYIVMDLIEGAPLGEHFNSLKEKKQRFTEERIWNIFVQMVLALRYLHK  131 (269)
T ss_pred             cCCeEEEEEecCCCCcHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHhcc
Confidence            99999999999999999877632    3468999999999999999999995

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.

>KOG4278|consensus

Probab=99.73  E-value=1.5e-17  Score=114.93  Aligned_cols=112  Identities=18%  Similarity=0.114  Sum_probs=98.9

Q ss_pred             ceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeEEEEEeccC
Q psy8006           9 SSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLLELLT   88 (126)
Q Consensus         9 ~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~~lv~e~~~   88 (126)
                      -...||-|.||.||.|.+++....+|||.+....+.   ..+|+.|..+|+.+.| ||+|++.+.|......||+.|||.
T Consensus       271 MkhKLGGGQYGeVYeGvWKkyslTvAVKtLKEDtMe---veEFLkEAAvMKeikH-pNLVqLLGVCT~EpPFYIiTEfM~  346 (1157)
T KOG4278|consen  271 MKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME---VEEFLKEAAVMKEIKH-PNLVQLLGVCTHEPPFYIITEFMC  346 (1157)
T ss_pred             eeeccCCCcccceeeeeeeccceeeehhhhhhcchh---HHHHHHHHHHHHhhcC-ccHHHHhhhhccCCCeEEEEeccc
Confidence            355799999999999999999999999999876553   3479999999999999 999999999999999999999999


Q ss_pred             cccHHHHHHhc--CCCCHHHHHHHHHHHHHHHHhhhcc
Q psy8006          89 SAVDSKIRESF--GSKSESGVQNCLEPSISVFSSLSKF  124 (126)
Q Consensus        89 ~~~L~~~~~~~--~~~~~~~~~~~~~qi~~~l~~l~~~  124 (126)
                      .|.|.+++++.  .-++.-..++++.||.+|++||++.
T Consensus       347 yGNLLdYLRecnr~ev~avvLlyMAtQIsSaMeYLEkk  384 (1157)
T KOG4278|consen  347 YGNLLDYLRECNRSEVPAVVLLYMATQISSAMEYLEKK  384 (1157)
T ss_pred             CccHHHHHHHhchhhcchhHHHHHHHHHHHHHHHHHHh
Confidence            99999999753  3466667789999999999999875

>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4

Probab=99.72  E-value=2.4e-16  Score=102.67  Aligned_cols=119  Identities=14%  Similarity=0.120  Sum_probs=96.4

Q ss_pred             ccccceeeccCccceeEEEEEEccCCc----EEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeE
Q psy8006           5 KNIISSIINDMGKYATVRRCRDRKNGT----QYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDM   80 (126)
Q Consensus         5 ~~~~~~~~lg~g~~~~v~~~~~~~~~~----~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~   80 (126)
                      ..|...+.||+|+||.||++.+..++.    .+|+|.+..... ......+.+|+.++..++| ||++++++.+..+ ..
T Consensus         7 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~e~~~~~~l~h-~niv~~~~~~~~~-~~   83 (303)
T cd05110           7 TELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTG-PKANVEFMDEALIMASMDH-PHLVRLLGVCLSP-TI   83 (303)
T ss_pred             hhceeccccccCCCccEEEEEEecCCCcceeeEEEEeccccCC-HHHHHHHHHHHHHHHhCCC-CCcccEEEEEcCC-Cc
Confidence            345667889999999999999877765    468888765432 2223468899999999998 9999999988654 46


Q ss_pred             EEEEeccCcccHHHHHHhc-CCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          81 ILLLELLTSAVDSKIRESF-GSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        81 ~lv~e~~~~~~L~~~~~~~-~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      ++++|++++|+|.+++... ..+++..+..++.|++.|++|||+.++
T Consensus        84 ~~v~e~~~~g~l~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~i  130 (303)
T cd05110          84 QLVTQLMPHGCLLDYVHEHKDNIGSQLLLNWCVQIAKGMMYLEERRL  130 (303)
T ss_pred             eeeehhcCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHhhcCe
Confidence            7899999999998888654 368999999999999999999998763

Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin

>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain

Probab=99.72  E-value=1.2e-16  Score=98.03  Aligned_cols=113  Identities=17%  Similarity=0.076  Sum_probs=82.8

Q ss_pred             eeeccCccceeEEEEEEccCCcEEEEEEeecCCCCchh------------------------HHHHHHHHHHHHHhcCCC
Q psy8006          10 SIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDL------------------------KAEILHEVAVLEACRCNS   65 (126)
Q Consensus        10 ~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~------------------------~~~~~~e~~~l~~~~~~~   65 (126)
                      ...||+|++|.||.|.+. +|+.+|+|+++........                        .....+|+..+..+.+ +
T Consensus         2 ~~~ig~G~~~~Vy~a~~~-~g~~vAvKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~-~   79 (190)
T cd05147           2 NGCISTGKEANVYHATTA-NGEERAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKSNPRKMVRTWAEKEMRNLKRLVT-A   79 (190)
T ss_pred             CCccccccceEEEEEECC-CCCEEEEEEEEecccccccHHHhhcCCchhhccccCCCHHHHHHHHHHHHHHHHHHHHH-C
Confidence            357999999999999986 8999999999875321111                        1123458999999987 6


Q ss_pred             CceeeeeeeEeCCeEEEEEeccCcccHHHHHHhcCCCCHHHHHHHHHHHHHHHHhh-hccCC
Q psy8006          66 RIVQLHQVFESSHDMILLLELLTSAVDSKIRESFGSKSESGVQNCLEPSISVFSSL-SKFET  126 (126)
Q Consensus        66 ~iv~l~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~l-~~~~~  126 (126)
                      ++...... ... ..++||||++++++.........++...+..++.|++.++.++ |+.++
T Consensus        80 ~v~~p~~~-~~~-~~~iVmE~i~g~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~l~H~~gi  139 (190)
T cd05147          80 GIPCPEPI-LLK-SHVLVMEFIGDDGWAAPRLKDAPLSESKARELYLQVIQIMRILYQDCRL  139 (190)
T ss_pred             CCCCCcEE-Eec-CCEEEEEEeCCCCCcchhhhcCCCCHHHHHHHHHHHHHHHHHHHHhCCc
Confidence            65432222 222 2389999999987755433446789999999999999999999 67664

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c

>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase

Probab=99.72  E-value=2.2e-16  Score=104.56  Aligned_cols=118  Identities=20%  Similarity=0.228  Sum_probs=96.7

Q ss_pred             ccccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCC------
Q psy8006           5 KNIISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSH------   78 (126)
Q Consensus         5 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~------   78 (126)
                      .+|...+.||+|++|.||+|.+..++..+|+|.+............+.+|+.++..++| ||++++.+.+....      
T Consensus        15 ~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h-~niv~~~~~~~~~~~~~~~~   93 (342)
T cd07879          15 ERYTSLKQVGSGAYGSVCSAIDKRTGEKVAIKKLSRPFQSEIFAKRAYRELTLLKHMQH-ENVIGLLDVFTSAVSGDEFQ   93 (342)
T ss_pred             cceEEEEEeeecCCeEEEEEEeCCCCcEEEEEEecCccccccchhHHHHHHHHHHhcCC-CCccchhheecccccCCCCc
Confidence            45777889999999999999998899999999987654333334458899999999998 99999999886442      


Q ss_pred             eEEEEEeccCcccHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          79 DMILLLELLTSAVDSKIRESFGSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        79 ~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      ..++++|++.. ++..+..  ..+++..+..++.|++.|++|||+.++
T Consensus        94 ~~~lv~e~~~~-~l~~~~~--~~~~~~~~~~~~~qi~~aL~~LH~~~i  138 (342)
T cd07879          94 DFYLVMPYMQT-DLQKIMG--HPLSEDKVQYLVYQMLCGLKYIHSAGI  138 (342)
T ss_pred             eEEEEeccccc-CHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCc
Confidence            46899999876 4665543  368999999999999999999998764

Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13

>KOG0579|consensus

Probab=99.72  E-value=1.8e-18  Score=119.58  Aligned_cols=113  Identities=17%  Similarity=0.176  Sum_probs=98.6

Q ss_pred             eeeccCccceeEEEEEEccCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeEEEEEeccCc
Q psy8006          10 SIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLLELLTS   89 (126)
Q Consensus        10 ~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~~lv~e~~~~   89 (126)
                      ...||.|+||+||+|.++.++...|.|.|.-..  .+....++-|++++..++| |+|+++++.|...+.+|++.|||+|
T Consensus        37 iGELGDGAFGKVyKA~nket~~lAAaKvIetks--eEELEDylVEIeILa~CdH-P~ivkLl~ayy~enkLwiliEFC~G  113 (1187)
T KOG0579|consen   37 IGELGDGAFGKVYKAVNKETKLLAAAKVIETKS--EEELEDYLVEIEILAECDH-PVIVKLLSAYYFENKLWILIEFCGG  113 (1187)
T ss_pred             HhhhcCccchhhhhhhcccchhhhhhhhhcccc--hhHHhhhhhhhhhhhcCCC-hHHHHHHHHHhccCceEEEEeecCC
Confidence            456899999999999999998888999887442  3445568899999999998 9999999999999999999999999


Q ss_pred             ccHHHHHH-hcCCCCHHHHHHHHHHHHHHHHhhhccC
Q psy8006          90 AVDSKIRE-SFGSKSESGVQNCLEPSISVFSSLSKFE  125 (126)
Q Consensus        90 ~~L~~~~~-~~~~~~~~~~~~~~~qi~~~l~~l~~~~  125 (126)
                      |....++- -...++++++..+++|++.||.|||...
T Consensus       114 GAVDaimlEL~r~LtE~QIqvvc~q~ldALn~LHs~~  150 (1187)
T KOG0579|consen  114 GAVDAIMLELGRVLTEDQIQVVCYQVLDALNWLHSQN  150 (1187)
T ss_pred             chHhHHHHHhccccchHHHHHHHHHHHHHHHHHhhcc
Confidence            97766554 4668999999999999999999999864

>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7

Probab=99.72  E-value=4.7e-16  Score=100.94  Aligned_cols=119  Identities=18%  Similarity=0.226  Sum_probs=97.7

Q ss_pred             ccccccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeEEE
Q psy8006           3 NIKNIISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMIL   82 (126)
Q Consensus         3 ~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~~l   82 (126)
                      +.++|...+.+|+|++|.||++.+..++..+|+|.+...... .....+.+|+..+.....|||++++++.+..+...|+
T Consensus        13 ~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~-~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~   91 (296)
T cd06618          13 DLNDLENLGEIGSGTCGQVYKMRFKKTGHVMAVKQMRRTGNK-EENKRILMDLDVVLKSHDCPYIVKCYGYFITDSDVFI   91 (296)
T ss_pred             CcchheeeeEeeccCCeEEEEEEECCCCeEEEEEEEeccCCh-HHHHHHHHHHHHHHhccCCCchHhhheeeecCCeEEE
Confidence            356677888999999999999999988999999999765432 2234567788777777644999999999999999999


Q ss_pred             EEeccCcccHHHHHHh-cCCCCHHHHHHHHHHHHHHHHhhhc
Q psy8006          83 LLELLTSAVDSKIRES-FGSKSESGVQNCLEPSISVFSSLSK  123 (126)
Q Consensus        83 v~e~~~~~~L~~~~~~-~~~~~~~~~~~~~~qi~~~l~~l~~  123 (126)
                      +||++.+. +..+... ...+++..+..++.|++.+++|||.
T Consensus        92 v~e~~~~~-l~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~  132 (296)
T cd06618          92 CMELMSTC-LDKLLKRIQGPIPEDILGKMTVAIVKALHYLKE  132 (296)
T ss_pred             EeeccCcC-HHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHh
Confidence            99998664 6666554 4578999999999999999999996

Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it

>KOG0986|consensus

Probab=99.70  E-value=8.8e-18  Score=111.83  Aligned_cols=121  Identities=22%  Similarity=0.224  Sum_probs=103.9

Q ss_pred             ccccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCchhHH-HHHHHHHHHHHhcCCCCceeeeeeeEeCCeEEEE
Q psy8006           5 KNIISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKA-EILHEVAVLEACRCNSRIVQLHQVFESSHDMILL   83 (126)
Q Consensus         5 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~-~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~~lv   83 (126)
                      +.|..-++||+|+||.|+-|.-+.+|+.+|.|.+.+.......-. -.++|-.++.+++. +.||.+-.+|++.+.+++|
T Consensus       185 n~F~~~RvlGkGGFGEV~acqvraTGKMYAcKkL~KKRiKkr~ge~maLnEk~iL~kV~s-~FiVslaYAfeTkd~LClV  263 (591)
T KOG0986|consen  185 NTFRVYRVLGKGGFGEVCACQVRATGKMYACKKLDKKRIKKRKGETMALNEKQILEKVSS-PFIVSLAYAFETKDALCLV  263 (591)
T ss_pred             cceeeeEEEecccccceeEEEEecchhhHHHHHHHHHHHHHhhhhHHhhHHHHHHHHhcc-CcEEEEeeeecCCCceEEE
Confidence            445567899999999999999999999999999988765332222 36788899999999 9999999999999999999


Q ss_pred             EeccCcccHHHHHHhc--CCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          84 LELLTSAVDSKIRESF--GSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        84 ~e~~~~~~L~~~~~~~--~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      +..|.||+|...+.+-  +.|++..+++++.+|+-+|++||+.+|
T Consensus       264 LtlMNGGDLkfHiyn~g~~gF~e~ra~FYAAEi~cGLehlH~~~i  308 (591)
T KOG0986|consen  264 LTLMNGGDLKFHIYNHGNPGFDEQRARFYAAEIICGLEHLHRRRI  308 (591)
T ss_pred             EEeecCCceeEEeeccCCCCCchHHHHHHHHHHHhhHHHHHhcce
Confidence            9999999996666543  379999999999999999999999764

>KOG0587|consensus

Probab=99.70  E-value=5.6e-16  Score=109.61  Aligned_cols=115  Identities=16%  Similarity=0.177  Sum_probs=99.3

Q ss_pred             ccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeE-----eCCeEE
Q psy8006           7 IISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFE-----SSHDMI   81 (126)
Q Consensus         7 ~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~-----~~~~~~   81 (126)
                      +...+++|.|.+|.||++++++++...|+|++....-.   ..+...|.++++...+|||++.+++++.     .++.+|
T Consensus        21 ~ei~evig~Gtygkv~k~k~~~~~~~aa~kI~~~~~d~---deEiE~eynil~~~~~hpnv~~fyg~~~k~~~~~~DqLW   97 (953)
T KOG0587|consen   21 FEIIEVIGNGTYGKVYKGRHVKTGQLAAIKIMDPTEDE---EEEIELEYNMLKKYSHHPNVATFYGAFIKKDPGNGDQLW   97 (953)
T ss_pred             cEEEEEEeeccceeEEEEeeeecCceeeeEeecCCccc---cHHHHHHHHHHHhccCCCCcceEEEEEEEecCCCCCeEE
Confidence            34467899999999999999999999999999876432   2357788899999988899999999985     345899


Q ss_pred             EEEeccCcccHHHHHHh--cCCCCHHHHHHHHHHHHHHHHhhhcc
Q psy8006          82 LLLELLTSAVDSKIRES--FGSKSESGVQNCLEPSISVFSSLSKF  124 (126)
Q Consensus        82 lv~e~~~~~~L~~~~~~--~~~~~~~~~~~~~~qi~~~l~~l~~~  124 (126)
                      +|||||.+|+..++++.  ...+.|..+..+++.++.++.+||+-
T Consensus        98 LVMEfC~gGSVTDLVKn~~g~rl~E~~IaYI~re~lrgl~HLH~n  142 (953)
T KOG0587|consen   98 LVMEFCGGGSVTDLVKNTKGNRLKEEWIAYILREILRGLAHLHNN  142 (953)
T ss_pred             EEeeccCCccHHHHHhhhcccchhhHHHHHHHHHHHHHHHHHhhc
Confidence            99999999999999975  45799999999999999999999973

>KOG1025|consensus

Probab=99.70  E-value=3.4e-17  Score=115.51  Aligned_cols=116  Identities=15%  Similarity=0.076  Sum_probs=98.7

Q ss_pred             cceeeccCccceeEEEEEEccCC----cEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeEEEE
Q psy8006           8 ISSIINDMGKYATVRRCRDRKNG----TQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILL   83 (126)
Q Consensus         8 ~~~~~lg~g~~~~v~~~~~~~~~----~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~~lv   83 (126)
                      ...++||+|+||.||+|..-..|    .+||+|++..... .+...+++.|..+|.+++| ||++++.+.+..+. +.||
T Consensus       699 kk~kvLGsgAfGtV~kGiw~Pege~vKipVaiKvl~~~t~-~~~s~e~LdeAl~masldH-pnl~RLLgvc~~s~-~qlv  775 (1177)
T KOG1025|consen  699 KKDKVLGSGAFGTVYKGIWIPEGENVKIPVAIKVLIEFTS-PKASIELLDEALRMASLDH-PNLLRLLGVCMLST-LQLV  775 (1177)
T ss_pred             hhhceeccccceeEEeeeEecCCceecceeEEEEeeccCC-chhhHHHHHHHHHHhcCCC-chHHHHhhhcccch-HHHH
Confidence            45789999999999999875544    3789999986543 3345689999999999999 99999999987554 8899


Q ss_pred             EeccCcccHHHHHHh-cCCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          84 LELLTSAVDSKIRES-FGSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        84 ~e~~~~~~L~~~~~~-~~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      .+|++.|.|.++++. +..+-....+.|..||++|+.|||+.++
T Consensus       776 tq~mP~G~LlDyvr~hr~~igsq~lLnw~~QIAkgM~YLe~qrl  819 (1177)
T KOG1025|consen  776 TQLMPLGCLLDYVREHRDNIGSQDLLNWCYQIAKGMKYLEEQRL  819 (1177)
T ss_pred             HHhcccchHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHhcch
Confidence            999999999999875 4578889999999999999999998763

>smart00221 STYKc Protein kinase; unclassified specificity

Probab=99.70  E-value=2.3e-15  Score=93.62  Aligned_cols=116  Identities=22%  Similarity=0.291  Sum_probs=101.2

Q ss_pred             cceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeEEEEEecc
Q psy8006           8 ISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLLELL   87 (126)
Q Consensus         8 ~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~~lv~e~~   87 (126)
                      ...+.+|+|++|.||++.+..++..+++|.+...... .....+.+|+..+..+++ ++++++++.+......++++|++
T Consensus         2 ~~~~~i~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~-~~~~~~~~e~~~~~~~~~-~~i~~~~~~~~~~~~~~~v~e~~   79 (225)
T smart00221        2 ELGKKLGEGAFGKVYLARDKGTGELVAVKVLKKEKTE-KQREEFLREIRILKKLKH-PNIVKLYGVFEDPEPLYLVMEYC   79 (225)
T ss_pred             ceeeEeecCCCeEEEEEEEcCCCcEEEEEeeccccch-HHHHHHHHHHHHHHhCCC-CChhhheeeeecCCceEEEEecc
Confidence            3457899999999999999988899999999876433 134468899999999988 99999999998888999999999


Q ss_pred             CcccHHHHHHhcCC-CCHHHHHHHHHHHHHHHHhhhccC
Q psy8006          88 TSAVDSKIRESFGS-KSESGVQNCLEPSISVFSSLSKFE  125 (126)
Q Consensus        88 ~~~~L~~~~~~~~~-~~~~~~~~~~~qi~~~l~~l~~~~  125 (126)
                      ++++|.+++..... +++..+..++.|++.++.+||+.+
T Consensus        80 ~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~  118 (225)
T smart00221       80 EGGDLFDYLRKKGGKLSEEEARFYLRQILEALEYLHSLG  118 (225)
T ss_pred             CCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            99899999887555 899999999999999999999875

Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.

>KOG0199|consensus

Probab=99.70  E-value=9.1e-17  Score=111.91  Aligned_cols=116  Identities=15%  Similarity=0.123  Sum_probs=97.1

Q ss_pred             ccceeeccCccceeEEEEEEcc-CCc--EEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeEEEE
Q psy8006           7 IISSIINDMGKYATVRRCRDRK-NGT--QYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILL   83 (126)
Q Consensus         7 ~~~~~~lg~g~~~~v~~~~~~~-~~~--~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~~lv   83 (126)
                      +...++||+|.||.|++|.+.. +|.  .||||+++...... ....|.+|+.+|.+++| +|++++|+.+.+ ....+|
T Consensus       112 i~l~e~LG~GsFgvV~rg~Wt~psgk~V~VAVKclr~d~l~~-~mddflrEas~M~~L~H-~hliRLyGvVl~-qp~mMV  188 (1039)
T KOG0199|consen  112 IKLYELLGEGSFGVVKRGTWTQPSGKHVNVAVKCLRDDSLNA-IMDDFLREASHMLKLQH-PHLIRLYGVVLD-QPAMMV  188 (1039)
T ss_pred             HHHHHHhcCcceeeEeeccccCCCCcEEeEEEEeccCCccch-hHHHHHHHHHHHHhccC-cceeEEeeeecc-chhhHH
Confidence            4456789999999999997643 333  68999999876543 34569999999999999 999999999986 568899


Q ss_pred             EeccCcccHHHHHHh--cCCCCHHHHHHHHHHHHHHHHhhhccC
Q psy8006          84 LELLTSAVDSKIRES--FGSKSESGVQNCLEPSISVFSSLSKFE  125 (126)
Q Consensus        84 ~e~~~~~~L~~~~~~--~~~~~~~~~~~~~~qi~~~l~~l~~~~  125 (126)
                      +|+++.|+|.+.+..  +..|.......++.||+.|+.||...+
T Consensus       189 ~ELaplGSLldrLrka~~~~llv~~Lcdya~QiA~aM~YLeskr  232 (1039)
T KOG0199|consen  189 FELAPLGSLLDRLRKAKKAILLVSRLCDYAMQIAKAMQYLESKR  232 (1039)
T ss_pred             hhhcccchHHHHHhhccccceeHHHHHHHHHHHHHHHHHHhhhh
Confidence            999999999877754  457888999999999999999998653

>KOG0576|consensus

Probab=99.69  E-value=1.9e-18  Score=119.11  Aligned_cols=119  Identities=18%  Similarity=0.227  Sum_probs=106.3

Q ss_pred             cccccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeEEEE
Q psy8006           4 IKNIISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILL   83 (126)
Q Consensus         4 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~~lv   83 (126)
                      -.+|..-..+|+|++|.||++++..++...|+|.++...-  ........|+-+++.++| |||+.+++.+......|+.
T Consensus        14 ~ddyellqrvgsgTygdvyKaRd~~s~elaavkvVkLep~--dd~~~iqqei~~~~dc~h-~nivay~gsylr~dklwic   90 (829)
T KOG0576|consen   14 QDDYELLQRVGSGTYGDVYKARDKRSGELAAVKVVKLEPG--DDFSGIQQEIGMLRDCRH-PNIVAYFGSYLRRDKLWIC   90 (829)
T ss_pred             ccchhheeeecCCcccchhhhcccccCchhhheeeeccCC--ccccccccceeeeecCCC-cChHHHHhhhhhhcCcEEE
Confidence            3456667789999999999999999999999999987643  334567889999999999 9999999999999999999


Q ss_pred             EeccCcccHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhhccC
Q psy8006          84 LELLTSAVDSKIRESFGSKSESGVQNCLEPSISVFSSLSKFE  125 (126)
Q Consensus        84 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~l~~~~  125 (126)
                      ||||++|+|+++..--+++++.++.+.++..+.+++|||.++
T Consensus        91 MEycgggslQdiy~~TgplselqiayvcRetl~gl~ylhs~g  132 (829)
T KOG0576|consen   91 MEYCGGGSLQDIYHVTGPLSELQIAYVCRETLQGLKYLHSQG  132 (829)
T ss_pred             EEecCCCcccceeeecccchhHHHHHHHhhhhccchhhhcCC
Confidence            999999999988877789999999999999999999999876

>PRK09188 serine/threonine protein kinase; Provisional

Probab=99.69  E-value=6.5e-16  Score=102.64  Aligned_cols=110  Identities=12%  Similarity=0.045  Sum_probs=82.7

Q ss_pred             ccccceeeccCccceeEEEEEEcc-CCcEEEEEEeecCCC---CchhHHHHHHHHHHHHHhcCCCCcee-eeeeeEeCCe
Q psy8006           5 KNIISSIINDMGKYATVRRCRDRK-NGTQYAAKFLRKKRR---STDLKAEILHEVAVLEACRCNSRIVQ-LHQVFESSHD   79 (126)
Q Consensus         5 ~~~~~~~~lg~g~~~~v~~~~~~~-~~~~~aiK~~~~~~~---~~~~~~~~~~e~~~l~~~~~~~~iv~-l~~~~~~~~~   79 (126)
                      ..|...+.||+|+||.||+|.+.. ++..+|+|.+.....   .......+.+|+.++..++| ++++. +++    .+.
T Consensus        18 ~~Y~~~~~IG~G~fg~Vy~a~~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~E~~iL~~L~h-~~iv~~l~~----~~~   92 (365)
T PRK09188         18 ARFVETAVLKRDVFSTVERGYFAGDPGTARAVRRRVSEVPWWSKPLARHLAAREIRALKTVRG-IGVVPQLLA----TGK   92 (365)
T ss_pred             CCceEccEEeecCcEEEEEEEEcCCCCeEEEEEEecccccccccHHHHHHHHHHHHHHHhccC-CCCCcEEEE----cCC
Confidence            457778899999999999998876 677789998764321   12223458999999999998 88874 443    245


Q ss_pred             EEEEEeccCcccHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          80 MILLLELLTSAVDSKIRESFGSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        80 ~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      .|+||||+++++|... ..   ..   ...++.|+++++.|||..++
T Consensus        93 ~~LVmE~~~G~~L~~~-~~---~~---~~~~~~~i~~aL~~lH~~gI  132 (365)
T PRK09188         93 DGLVRGWTEGVPLHLA-RP---HG---DPAWFRSAHRALRDLHRAGI  132 (365)
T ss_pred             cEEEEEccCCCCHHHh-Cc---cc---hHHHHHHHHHHHHHHHHCCC
Confidence            8999999999988632 11   11   14678999999999999774

>KOG4257|consensus

Probab=99.69  E-value=4.3e-16  Score=107.61  Aligned_cols=115  Identities=13%  Similarity=0.093  Sum_probs=94.9

Q ss_pred             cceeeccCccceeEEEEEEccC----CcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeEEEE
Q psy8006           8 ISSIINDMGKYATVRRCRDRKN----GTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILL   83 (126)
Q Consensus         8 ~~~~~lg~g~~~~v~~~~~~~~----~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~~lv   83 (126)
                      ...+.||.|.||.||.|.....    ...||||+-+... ..+..+.|+.|..+|++.+| |||+++.+.+.. ...|||
T Consensus       392 tl~r~iG~GqFGdVy~gvYt~~~kge~iaVAvKtCK~d~-t~d~tekflqEa~iMrnfdH-phIikLIGv~~e-~P~Wiv  468 (974)
T KOG4257|consen  392 TLKRLIGEGQFGDVYKGVYTDPEKGERIAVAVKTCKTDC-TPDDTEKFLQEASIMRNFDH-PHIIKLIGVCVE-QPMWIV  468 (974)
T ss_pred             cHHHhhcCCcccceeeeEecccccCcceeeeeehhccCC-ChhhHHHHHHHHHHHHhCCC-cchhheeeeeec-cceeEE
Confidence            4577899999999999975322    3357888765433 33446679999999999999 999999999974 458999


Q ss_pred             EeccCcccHHHHHHhc-CCCCHHHHHHHHHHHHHHHHhhhccC
Q psy8006          84 LELLTSAVDSKIRESF-GSKSESGVQNCLEPSISVFSSLSKFE  125 (126)
Q Consensus        84 ~e~~~~~~L~~~~~~~-~~~~~~~~~~~~~qi~~~l~~l~~~~  125 (126)
                      ||+++.|.|..+++.+ ..++......++.|+..|++|||...
T Consensus       469 mEL~~~GELr~yLq~nk~sL~l~tL~ly~~Qi~talaYLeSkr  511 (974)
T KOG4257|consen  469 MELAPLGELREYLQQNKDSLPLRTLTLYCYQICTALAYLESKR  511 (974)
T ss_pred             EecccchhHHHHHHhccccchHHHHHHHHHHHHHHHHHHHhhc
Confidence            9999999999999864 57899999999999999999999753

>KOG1290|consensus

Probab=99.69  E-value=1.1e-15  Score=102.62  Aligned_cols=115  Identities=18%  Similarity=0.233  Sum_probs=95.5

Q ss_pred             ccccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcC-------CCCceeeeeeeE--
Q psy8006           5 KNIISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRC-------NSRIVQLHQVFE--   75 (126)
Q Consensus         5 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~-------~~~iv~l~~~~~--   75 (126)
                      ..|...+.||=|-|++||+|++.+..+.||+|+.+.+.   ...+....|+.+++++..       ..+||++++.|.  
T Consensus        78 gRY~v~rKLGWGHFSTVWLawDtq~~r~VAlKVvKSAq---hYtEaAlDEIklL~~v~~~Dp~~~~~~~VV~LlD~Fkhs  154 (590)
T KOG1290|consen   78 GRYHVQRKLGWGHFSTVWLAWDTQNKRYVALKVVKSAQ---HYTEAALDEIKLLQQVREGDPNDPGKKCVVQLLDHFKHS  154 (590)
T ss_pred             ceEEEEEeccccccceeEEEeeccCCeEEEEEEEehhh---HHHHHHHHHHHHHHHHHhcCCCCCCCceeeeeeccceec
Confidence            45777889999999999999999999999999998763   334468889999998753       147999999986  


Q ss_pred             --eCCeEEEEEeccCcccHHHHHHh--cCCCCHHHHHHHHHHHHHHHHhhhc
Q psy8006          76 --SSHDMILLLELLTSAVDSKIRES--FGSKSESGVQNCLEPSISVFSSLSK  123 (126)
Q Consensus        76 --~~~~~~lv~e~~~~~~L~~~~~~--~~~~~~~~~~~~~~qi~~~l~~l~~  123 (126)
                        .+.++++|+|++... |..+|+.  ...++...+..+++|++.+|.|||+
T Consensus       155 GpNG~HVCMVfEvLGdn-LLklI~~s~YrGlpl~~VK~I~~qvL~GLdYLH~  205 (590)
T KOG1290|consen  155 GPNGQHVCMVFEVLGDN-LLKLIKYSNYRGLPLSCVKEICRQVLTGLDYLHR  205 (590)
T ss_pred             CCCCcEEEEEehhhhhH-HHHHHHHhCCCCCcHHHHHHHHHHHHHHHHHHHH
Confidence              344899999988777 6666654  3469999999999999999999996

>cd00180 PKc Catalytic domain of Protein Kinases

Probab=99.68  E-value=5.5e-15  Score=90.62  Aligned_cols=111  Identities=26%  Similarity=0.362  Sum_probs=97.9

Q ss_pred             ccCccceeEEEEEEccCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeEEEEEeccCcccH
Q psy8006          13 NDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLLELLTSAVD   92 (126)
Q Consensus        13 lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~~lv~e~~~~~~L   92 (126)
                      ||+|.+|.||++....++..+++|......... ....+.+|+..++.+++ ++++++.+.+......++++|++++++|
T Consensus         1 l~~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~-~~~~~~~e~~~~~~l~~-~~i~~~~~~~~~~~~~~~~~e~~~~~~l   78 (215)
T cd00180           1 LGEGGFGTVYLARDKKTGKKVAIKIIKKEDSSS-LLEELLREIEILKKLNH-PNIVKLYGVFEDENHLYLVMEYCEGGSL   78 (215)
T ss_pred             CCcCCceEEEEEEecCCCcEEEEEEeccccchh-HHHHHHHHHHHHHhcCC-CCeeeEeeeeecCCeEEEEEecCCCCcH
Confidence            689999999999998889999999998764321 23468999999999999 9999999999988899999999998889


Q ss_pred             HHHHHhc-CCCCHHHHHHHHHHHHHHHHhhhccC
Q psy8006          93 SKIRESF-GSKSESGVQNCLEPSISVFSSLSKFE  125 (126)
Q Consensus        93 ~~~~~~~-~~~~~~~~~~~~~qi~~~l~~l~~~~  125 (126)
                      .+++... ..++...+..++.+++.++.+||+.+
T Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~  112 (215)
T cd00180          79 KDLLKENEGKLSEDEILRILLQILEGLEYLHSNG  112 (215)
T ss_pred             HHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            9998765 46899999999999999999999875

Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which

>KOG1035|consensus

Probab=99.68  E-value=1.1e-16  Score=116.21  Aligned_cols=119  Identities=17%  Similarity=0.202  Sum_probs=98.9

Q ss_pred             cccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeE----------
Q psy8006           6 NIISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFE----------   75 (126)
Q Consensus         6 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~----------   75 (126)
                      +|..-.+||+|+||.|++++++-+|+.||||.|+... +........+|+.++.+++| ||+|+++..+.          
T Consensus       480 DFEEL~lLGkGGFG~VvkVRNKlDGr~YAIKKIpl~~-s~~~~skI~rEVk~LArLnH-pNVVRYysAWVEs~~~~~~~e  557 (1351)
T KOG1035|consen  480 DFEELELLGKGGFGSVVKVRNKLDGREYAIKKIPLKA-SDKLYSKILREVKLLARLNH-PNVVRYYSAWVESTAELTVLE  557 (1351)
T ss_pred             hhHHHHHhcCCCCceEEEEeecccchhhhhhhccCch-HHHHHHHHHHHHHHHhhcCC-cceeeeehhhhccCCcccccc
Confidence            4555679999999999999999999999999999876 55556679999999999999 99999985330          


Q ss_pred             -----------e----------------------------------C---------------------------------
Q psy8006          76 -----------S----------------------------------S---------------------------------   77 (126)
Q Consensus        76 -----------~----------------------------------~---------------------------------   77 (126)
                                 .                                  .                                 
T Consensus       558 i~~~~~~~~sQs~s~~~~~~~~~q~t~~p~~~~~~~~~~~~dd~sss~~~~~~~~~~~~d~e~~d~dedg~~~S~tS~~e  637 (1351)
T KOG1035|consen  558 IVASDSESRSQSASKYNGVDIRYQPTSSPSLTLSELDSEDEDDKSSSYTTRKASYESSTDEENDDSDEDGRNLSNTSDSE  637 (1351)
T ss_pred             ccccchhhhcccCCCcccceeeeccCCCcccCcchhhccccCccccccccccccccccCCcccccccccccccccccccC
Confidence                       0                                  0                                 


Q ss_pred             -------------------------------CeEEEEEeccCcccHHHHHHhcCCC-CHHHHHHHHHHHHHHHHhhhccC
Q psy8006          78 -------------------------------HDMILLLELLTSAVDSKIRESFGSK-SESGVQNCLEPSISVFSSLSKFE  125 (126)
Q Consensus        78 -------------------------------~~~~lv~e~~~~~~L~~~~~~~~~~-~~~~~~~~~~qi~~~l~~l~~~~  125 (126)
                                                     -.+||-||||+..++.+++.++... ....++.+|+||++|++|+|+++
T Consensus       638 ~~~~~d~~~ess~s~~~~~n~~e~~~~~q~~~~LYIQMEyCE~~ll~~iI~~N~~~~~~d~~wrLFreIlEGLaYIH~~g  717 (1351)
T KOG1035|consen  638 GSVILDDTSESSESIPKTENSSEPMVPVQKPLILYIQMEYCEKTLLRDIIRRNHFNSQRDEAWRLFREILEGLAYIHDQG  717 (1351)
T ss_pred             CccccCcchhhhhhccccCCccccccccccceEEEEEHhhhhhhHHHHHHHhcccchhhHHHHHHHHHHHHHHHHHHhCc
Confidence                                           1368899999999888888875543 46778999999999999999998


Q ss_pred             C
Q psy8006         126 T  126 (126)
Q Consensus       126 ~  126 (126)
                      |
T Consensus       718 i  718 (1351)
T KOG1035|consen  718 I  718 (1351)
T ss_pred             e
Confidence            6

>KOG0695|consensus

Probab=99.68  E-value=4.2e-17  Score=105.79  Aligned_cols=121  Identities=17%  Similarity=0.141  Sum_probs=107.1

Q ss_pred             cccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCC-chhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeEEEEE
Q psy8006           6 NIISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRS-TDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLL   84 (126)
Q Consensus         6 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~-~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~~lv~   84 (126)
                      +|-.-++||+|++++|..+.+.++.+.+|+|+++++... .+...+...|-.+..+.+++|.+|-++++|.+...++.|.
T Consensus       251 df~ll~vigrgsyakvl~~~~~~t~qiyamkvvkkel~nddedidwvqtek~vfe~asn~pflvglhscfqtesrlffvi  330 (593)
T KOG0695|consen  251 DFDLLRVIGRGSYAKVLLVRLKKTDQIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNNPFLVGLHSCFQTESRLFFVI  330 (593)
T ss_pred             cceeeeeecCcchhhhhheehcccceeeehhhHHHHhcCCcccchhHHhhHHHHHhccCCCeEEehhhhhcccceEEEEE
Confidence            455678999999999999999999999999999987653 3445567777778888877799999999999999999999


Q ss_pred             eccCcccHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          85 ELLTSAVDSKIRESFGSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        85 e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      ||.++|+|.-.+++.+++|+..++++...|..|+.|||+.||
T Consensus       331 eyv~ggdlmfhmqrqrklpeeharfys~ei~lal~flh~rgi  372 (593)
T KOG0695|consen  331 EYVNGGDLMFHMQRQRKLPEEHARFYSAEICLALNFLHERGI  372 (593)
T ss_pred             EEecCcceeeehhhhhcCcHHHhhhhhHHHHHHHHHHhhcCe
Confidence            999999998788888899999999999999999999999875

>KOG4721|consensus

Probab=99.67  E-value=1.8e-16  Score=108.48  Aligned_cols=107  Identities=13%  Similarity=0.055  Sum_probs=93.2

Q ss_pred             ccccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeEEEEE
Q psy8006           5 KNIISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLL   84 (126)
Q Consensus         5 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~~lv~   84 (126)
                      ..+..-+-||+|+-|.||.|...  ++.||||.++.-.         .-++.-|++++| |||+.+.+.+.....++|+|
T Consensus       124 e~IsELeWlGSGaQGAVF~Grl~--netVAVKKV~elk---------ETdIKHLRkLkH-~NII~FkGVCtqsPcyCIiM  191 (904)
T KOG4721|consen  124 EEISELEWLGSGAQGAVFLGRLH--NETVAVKKVRELK---------ETDIKHLRKLKH-PNIITFKGVCTQSPCYCIIM  191 (904)
T ss_pred             HHhhhhhhhccCcccceeeeecc--CceehhHHHhhhh---------hhhHHHHHhccC-cceeeEeeeecCCceeEEee
Confidence            34455667999999999999864  6789999876421         235677899999 99999999999999999999


Q ss_pred             eccCcccHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhhc
Q psy8006          85 ELLTSAVDSKIRESFGSKSESGVQNCLEPSISVFSSLSK  123 (126)
Q Consensus        85 e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~l~~  123 (126)
                      |||..|.|+.+++...+++......|..+|+.++.|||.
T Consensus       192 EfCa~GqL~~VLka~~~itp~llv~Wsk~IA~GM~YLH~  230 (904)
T KOG4721|consen  192 EFCAQGQLYEVLKAGRPITPSLLVDWSKGIAGGMNYLHL  230 (904)
T ss_pred             eccccccHHHHHhccCccCHHHHHHHHHHhhhhhHHHHH
Confidence            999999999999998999999999999999999999995

>KOG4645|consensus

Probab=99.67  E-value=3.2e-17  Score=119.59  Aligned_cols=118  Identities=14%  Similarity=0.095  Sum_probs=104.8

Q ss_pred             cceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeEEEEEecc
Q psy8006           8 ISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLLELL   87 (126)
Q Consensus         8 ~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~~lv~e~~   87 (126)
                      ..+..+|.|.||.||.|.+..+|...|+|.+.-..........+.+|..++..+.| ||+|+++++-...+..+|.||||
T Consensus      1238 qrg~~Ig~G~fG~VYtavN~~tGellAvKEI~iq~~~~k~~~~i~eEm~vlE~lnH-pNlV~YyGVEvHRekv~IFMEyC 1316 (1509)
T KOG4645|consen 1238 QRGNFIGGGTFGKVYTAVNLDTGELLAVKEIKIQDSDHKTFKLIAEEMKVLEGLNH-PNLVRYYGVEVHREKVYIFMEYC 1316 (1509)
T ss_pred             ccccccCCcceeeeEEeecCCccchhhhhhhhcCccccccCcchHHHHHHHHhccC-ccccccCceeecHHHHHHHHHHh
Confidence            35678999999999999999999999999887654443334468899999999999 99999999998888999999999


Q ss_pred             CcccHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          88 TSAVDSKIRESFGSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        88 ~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      ++|+|.+++...+..+|...+-+..|++.+++|||+-+|
T Consensus      1317 ~~GsLa~ll~~gri~dE~vt~vyt~qll~gla~LH~~gI 1355 (1509)
T KOG4645|consen 1317 EGGSLASLLEHGRIEDEMVTRVYTKQLLEGLAYLHEHGI 1355 (1509)
T ss_pred             ccCcHHHHHHhcchhhhhHHHHHHHHHHHHHHHHHhcCc
Confidence            999999999987778888889999999999999999775

>PRK10345 hypothetical protein; Provisional

Probab=99.66  E-value=6.9e-15  Score=91.29  Aligned_cols=112  Identities=12%  Similarity=0.062  Sum_probs=85.2

Q ss_pred             ccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcC----CCCceeeeeeeEeCC---e
Q psy8006           7 IISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRC----NSRIVQLHQVFESSH---D   79 (126)
Q Consensus         7 ~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~----~~~iv~l~~~~~~~~---~   79 (126)
                      +...++||+|+++.||.  +..++.. ++|++......  ....+.+|+.++..+.|    ||||+++++.+.++.   .
T Consensus         4 L~~~~~LG~G~~~~Vy~--hp~~~~k-~IKv~~~~~~~--~~~~~~rEi~~l~~L~~~~~~h~nIvr~yg~~et~~g~g~   78 (210)
T PRK10345          4 LSEQSPLGTGRHRKCYA--HPEDAQR-CIKIVYHRGDG--GDKEIRRELKYYAHLSRRLIDWSGIPRYYGTVETDCGTGY   78 (210)
T ss_pred             cCCcceecCCCceEEEE--CCCCcCe-EEEEEeccccc--hHHHHHHHHHHHHHhhccCCCCcccceeeEEEEeCCCCeE
Confidence            45678999999999995  6666555 79988764322  23468999999999932    399999999998763   4


Q ss_pred             EE-EEEec--cCcccHHHHHHhcCCCCHHHHHHHHHHHHHHH-HhhhccCC
Q psy8006          80 MI-LLLEL--LTSAVDSKIRESFGSKSESGVQNCLEPSISVF-SSLSKFET  126 (126)
Q Consensus        80 ~~-lv~e~--~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l-~~l~~~~~  126 (126)
                      .+ +|+||  +.+++|.+++++. .+++.  ..++.|++.++ +|||+.++
T Consensus        79 v~~~I~e~~G~~~~tL~~~l~~~-~~~e~--~~~~~~~L~~l~~yLh~~~I  126 (210)
T PRK10345         79 VYDVIADFDGKPSITLTEFAEQC-RYEED--VAQLRQLLKKLKRYLLDNRI  126 (210)
T ss_pred             EEEEEecCCCCcchhHHHHHHcc-cccHh--HHHHHHHHHHHHHHHHHCCE
Confidence            44 78999  5578999999763 46665  35678888777 99998764

>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain

Probab=99.66  E-value=6.1e-15  Score=90.46  Aligned_cols=113  Identities=17%  Similarity=0.108  Sum_probs=82.6

Q ss_pred             eeeccCccceeEEEEEEccCCcEEEEEEeecCCCCch-----------------------h-HHHHHHHHHHHHHhcCCC
Q psy8006          10 SIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTD-----------------------L-KAEILHEVAVLEACRCNS   65 (126)
Q Consensus        10 ~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~-----------------------~-~~~~~~e~~~l~~~~~~~   65 (126)
                      ...||+|++|.||+|.+. +|..+|+|+++.......                       . .....+|...+.++.+ +
T Consensus         2 ~~~ig~G~~~~Vy~a~~~-~g~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~-~   79 (190)
T cd05145           2 NGCISTGKEANVYHARTG-DGEELAVKIYKTSTLSFKDRDKYIEGDPRFRSRYSKSNPRKLVFAWAEKEFRNLKRLYE-A   79 (190)
T ss_pred             CceeecCCCcEEEEEEcC-CCCEEEEEEEEcCcceEeeHHHHhcCCcccccccccCCHHHHHHHHHHHHHHHHHHHHh-C
Confidence            357999999999999987 899999999987632110                       0 1124678899999988 7


Q ss_pred             CceeeeeeeEeCCeEEEEEeccCcccHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhhc-cCC
Q psy8006          66 RIVQLHQVFESSHDMILLLELLTSAVDSKIRESFGSKSESGVQNCLEPSISVFSSLSK-FET  126 (126)
Q Consensus        66 ~iv~l~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~l~~-~~~  126 (126)
                      ++.........  ..++||||++++++.........+++..+..++.|++.++.++|. .++
T Consensus        80 ~i~~p~~~~~~--~~~lVmE~~~g~~~~~~~l~~~~~~~~~~~~i~~~l~~~l~~lH~~~gi  139 (190)
T cd05145          80 GVPVPEPILLK--KNVLVMEFIGDDGSPAPRLKDVPLEEEEAEELYEQVVEQMRRLYQEAGL  139 (190)
T ss_pred             CCCCceEEEec--CCEEEEEEecCCCchhhhhhhccCCHHHHHHHHHHHHHHHHHHHHhCCE
Confidence            76443333222  248999999988553332233567888999999999999999998 653

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro

>KOG0668|consensus

Probab=99.65  E-value=1.1e-16  Score=98.85  Aligned_cols=117  Identities=15%  Similarity=0.209  Sum_probs=100.3

Q ss_pred             cccccccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCC--e
Q psy8006           2 NNIKNIISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSH--D   79 (126)
Q Consensus         2 ~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~--~   79 (126)
                      .+.++|...+.+|+|.++.||.|.+..++..+++|++.+-.     .+...||+.++..+..+|||+++.+...++.  .
T Consensus        35 g~~ddYeivrk~GRGKYSEVFeg~~~~~~eK~ViKiLKPVk-----kkKIkREikIL~nL~gg~NIi~L~DiV~Dp~Skt  109 (338)
T KOG0668|consen   35 GNQDDYEIVRKVGRGKYSEVFEGINITNNEKCVIKILKPVK-----KKKIKREIKILQNLRGGPNIIKLLDIVKDPESKT  109 (338)
T ss_pred             cccchHHHHHHHcCccHhhHhcccccCCCceEEEeeechHH-----HHHHHHHHHHHHhccCCCCeeehhhhhcCccccC
Confidence            35678888899999999999999999999999999987532     3468999999999986699999999997665  4


Q ss_pred             EEEEEeccCcccHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          80 MILLLELLTSAVDSKIRESFGSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        80 ~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      +.+++|+..+.+...+..   .++..+++.++.|++.|+.|-|.+||
T Consensus       110 paLiFE~v~n~Dfk~ly~---tl~d~dIryY~~elLkALdyCHS~GI  153 (338)
T KOG0668|consen  110 PSLIFEYVNNTDFKQLYP---TLTDYDIRYYIYELLKALDYCHSMGI  153 (338)
T ss_pred             chhHhhhhccccHHHHhh---hhchhhHHHHHHHHHHHHhHHHhcCc
Confidence            679999999887655444   58889999999999999999999986

>PHA03210 serine/threonine kinase US3; Provisional

Probab=99.63  E-value=4.7e-15  Score=102.71  Aligned_cols=120  Identities=8%  Similarity=0.055  Sum_probs=86.0

Q ss_pred             ccccceeeccCccceeEEEEEEccCCc-EEEEEEe--------------ecCC-CCchhHHHHHHHHHHHHHhcCCCCce
Q psy8006           5 KNIISSIINDMGKYATVRRCRDRKNGT-QYAAKFL--------------RKKR-RSTDLKAEILHEVAVLEACRCNSRIV   68 (126)
Q Consensus         5 ~~~~~~~~lg~g~~~~v~~~~~~~~~~-~~aiK~~--------------~~~~-~~~~~~~~~~~e~~~l~~~~~~~~iv   68 (126)
                      ..|...+.||+|+||.||+|..+.... ..+.|.+              .... ........+.+|+.++..++| |||+
T Consensus       148 ~~Y~ii~~LG~G~fG~Vyl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~Ei~il~~l~H-pnIv  226 (501)
T PHA03210        148 AHFRVIDDLPAGAFGKIFICALRASTEEAEARRGVNSTNQGKPKCERLIAKRVKAGSRAAIQLENEILALGRLNH-ENIL  226 (501)
T ss_pred             hccEEEeEecCCCCcceEEEEEeccchhhhhhhccccccccchhhhhhHhHHhhcchHHHHHHHHHHHHHHhCCC-CCcC
Confidence            356777899999999999987643322 1122211              1110 111223357899999999999 9999


Q ss_pred             eeeeeeEeCCeEEEEEeccCcccHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          69 QLHQVFESSHDMILLLELLTSAVDSKIRESF-----GSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        69 ~l~~~~~~~~~~~lv~e~~~~~~L~~~~~~~-----~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      ++++++...+..|++++++.++ +..++...     .......++.++.|++.||+|||+.++
T Consensus       227 ~l~~~~~~~~~~~lv~e~~~~~-l~~~l~~~~~~~~~~~~~~~~~~i~~ql~~aL~yLH~~gI  288 (501)
T PHA03210        227 KIEEILRSEANTYMITQKYDFD-LYSFMYDEAFDWKDRPLLKQTRAIMKQLLCAVEYIHDKKL  288 (501)
T ss_pred             cEeEEEEECCeeEEEEeccccC-HHHHHhhccccccccccHHHHHHHHHHHHHHHHHHHhCCe
Confidence            9999999999999999998776 55555321     234466788999999999999998764

>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain

Probab=99.62  E-value=2.3e-14  Score=89.80  Aligned_cols=108  Identities=23%  Similarity=0.339  Sum_probs=94.4

Q ss_pred             cceeEEEEEEccCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeEEEEEeccCcccHHHHH
Q psy8006          17 KYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLLELLTSAVDSKIR   96 (126)
Q Consensus        17 ~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~~lv~e~~~~~~L~~~~   96 (126)
                      +||.||++.+..++..+++|.+........ ...+.+|+..++.++| ++++++.+.+......++++|++++++|..++
T Consensus         1 ~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~-~~~~~~e~~~~~~l~~-~~i~~~~~~~~~~~~~~l~~e~~~~~~L~~~~   78 (244)
T smart00220        1 SFGKVYLARDKKTGKLVAIKVIKKEKIKKK-RERILREISILKKLKH-PNIVRLYDVFEDEDKLYLVMEYCDGGDLFDLL   78 (244)
T ss_pred             CceEEEEEEECCCCcEEEEEEecccccccH-HHHHHHHHHHHHhCCC-CcHHHHHhheeeCCEEEEEEeCCCCCCHHHHH
Confidence            478999999988899999999987654322 4568899999999988 99999999999889999999999998999988


Q ss_pred             HhcCCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          97 ESFGSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        97 ~~~~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      .....++...+..++.+++.++.+||+.++
T Consensus        79 ~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i  108 (244)
T smart00220       79 KKRGRLSEDEARFYARQILSALEYLHSNGI  108 (244)
T ss_pred             HhccCCCHHHHHHHHHHHHHHHHHHHHcCe
Confidence            775568999999999999999999998763

Phosphotransferases. Serine or threonine-specific kinase subfamily.

>KOG1006|consensus

Probab=99.62  E-value=1.6e-16  Score=99.88  Aligned_cols=116  Identities=16%  Similarity=0.166  Sum_probs=96.8

Q ss_pred             cccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeEEEEEe
Q psy8006           6 NIISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLLE   85 (126)
Q Consensus         6 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~~lv~e   85 (126)
                      +......||.|+||.|++..++.+|+..|||.++.... ....++++.|.+..++-+.+|+||++|++....+..|+.||
T Consensus        65 ~Lqdlg~iG~G~fG~V~KM~hk~sg~~mAVKrIr~~n~-~keq~rll~e~d~~mks~~cp~IVkfyGa~F~EGdcWiCME  143 (361)
T KOG1006|consen   65 NLQDLGEIGNGAFGTVNKMLHKPSGKLMAVKRIRSNNI-EKEQKRLLMEHDTVMKSSNCPNIVKFYGALFSEGDCWICME  143 (361)
T ss_pred             hHHHHHHhcCCcchhhhhhhcCccCcEEEEEEeeeccc-hHHHHHHHHHHHHHHhhcCCcHHHHHhhhhhcCCceeeeHH
Confidence            45556789999999999999999999999999998765 34456799999988888777999999999999999999999


Q ss_pred             ccCcccHHHHHH-----hcCCCCHHHHHHHHHHHHHHHHhhhc
Q psy8006          86 LLTSAVDSKIRE-----SFGSKSESGVQNCLEPSISVFSSLSK  123 (126)
Q Consensus        86 ~~~~~~L~~~~~-----~~~~~~~~~~~~~~~qi~~~l~~l~~  123 (126)
                      +|+.. +..+.+     .+..++|..+-.+.-..+.||.||.+
T Consensus       144 LMd~S-lDklYk~vy~vq~~~ipE~Ilg~ItvatV~AL~yLK~  185 (361)
T KOG1006|consen  144 LMDIS-LDKLYKRVYSVQKSRIPENILGHITVATVDALDYLKE  185 (361)
T ss_pred             HHhhh-HHHHHHHHHHHHhccCcHhhhhheeeeehhHHHHHHH
Confidence            99876 443332     34568998888888888999999854

>KOG2052|consensus

Probab=99.62  E-value=5.2e-15  Score=98.39  Aligned_cols=108  Identities=16%  Similarity=0.198  Sum_probs=91.7

Q ss_pred             ccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCchhHHHHHHHHHHHHH--hcCCCCceeeeeeeEeCC----eE
Q psy8006           7 IISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEA--CRCNSRIVQLHQVFESSH----DM   80 (126)
Q Consensus         7 ~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~--~~~~~~iv~l~~~~~~~~----~~   80 (126)
                      +...+.+|+|-||.||+|..+  |..||||++....     ...|.||.++.+.  ++| +||..+.++-..+.    .+
T Consensus       213 I~L~e~IGkGRyGEVwrG~wr--Ge~VAVKiF~srd-----E~SWfrEtEIYqTvmLRH-ENILgFIaaD~~~~gs~TQL  284 (513)
T KOG2052|consen  213 IVLQEIIGKGRFGEVWRGRWR--GEDVAVKIFSSRD-----ERSWFRETEIYQTVMLRH-ENILGFIAADNKDNGSWTQL  284 (513)
T ss_pred             eEEEEEecCccccceeecccc--CCceEEEEecccc-----hhhhhhHHHHHHHHHhcc-chhhhhhhccccCCCceEEE
Confidence            456788999999999999885  7789999997542     2258888888876  477 99999987765433    58


Q ss_pred             EEEEeccCcccHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhhc
Q psy8006          81 ILLLELLTSAVDSKIRESFGSKSESGVQNCLEPSISVFSSLSK  123 (126)
Q Consensus        81 ~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~l~~  123 (126)
                      |||.+|-+.|+|++++++ ..++...+..++..++++|++||-
T Consensus       285 wLvTdYHe~GSL~DyL~r-~tv~~~~ml~LalS~AsGLaHLH~  326 (513)
T KOG2052|consen  285 WLVTDYHEHGSLYDYLNR-NTVTTEGMLKLALSIASGLAHLHM  326 (513)
T ss_pred             EEeeecccCCcHHHHHhh-ccCCHHHHHHHHHHHhhhHHHHHH
Confidence            999999999999999997 779999999999999999999994

>KOG0696|consensus

Probab=99.62  E-value=1.3e-16  Score=105.80  Aligned_cols=121  Identities=17%  Similarity=0.102  Sum_probs=101.8

Q ss_pred             cccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCc-hhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeEEEEE
Q psy8006           6 NIISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRST-DLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLL   84 (126)
Q Consensus         6 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~-~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~~lv~   84 (126)
                      +|---.+||.|+||+|.++..+.+...+|||++++...-+ ......+.|-.++.-....|.+++++++|.+-+.+|.||
T Consensus       350 DFnFl~VlGKGSFGKVlLaerkgtdELyAiKiLkKDViiQdDDvectm~EKrvLAL~~kppFL~qlHScFQTmDRLyFVM  429 (683)
T KOG0696|consen  350 DFNFLMVLGKGSFGKVLLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLVQLHSCFQTMDRLYFVM  429 (683)
T ss_pred             ccceEEEeccCccceeeeecccCcchhhhhhhhccceeeecCcccceehhhhheecCCCCchHHHHHHHhhhhhheeeEE
Confidence            3444678999999999999999999999999999876522 222234556566655544589999999999999999999


Q ss_pred             eccCcccHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          85 ELLTSAVDSKIRESFGSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        85 e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      ||+.+|+|...+++-+.+.|+.+..++..|+-+|=+||+.+|
T Consensus       430 EyvnGGDLMyhiQQ~GkFKEp~AvFYAaEiaigLFFLh~kgI  471 (683)
T KOG0696|consen  430 EYVNGGDLMYHIQQVGKFKEPVAVFYAAEIAIGLFFLHSKGI  471 (683)
T ss_pred             EEecCchhhhHHHHhcccCCchhhhhhHHHHHHhhhhhcCCe
Confidence            999999998889988999999999999999999999999875

>KOG0664|consensus

Probab=99.61  E-value=4.1e-17  Score=103.25  Aligned_cols=119  Identities=17%  Similarity=0.217  Sum_probs=100.6

Q ss_pred             cccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCC-----eE
Q psy8006           6 NIISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSH-----DM   80 (126)
Q Consensus         6 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~-----~~   80 (126)
                      ++.+++.||=|+||.||...+.++|+.+|.|.+..-...-...+++-+|+.++...+| .|+.+..++...+.     .+
T Consensus        54 Di~PDRPIGYGAFGVVWsVTDPRdgrrvalkK~pnvfq~L~s~krvFre~kmLcfFkH-dNVLSaLDILQPph~dfFqEi  132 (449)
T KOG0664|consen   54 DIQPDRPIGYGAFGVVWSVTDPRSGKRVALKKMPNVFQNLASCKRVFREIKMLSSFRH-DNVLSLLDILQPANPSFFQEL  132 (449)
T ss_pred             cCCCCCcccccceeEEEeccCCCCccchhHhhcchHHHHHHHHHHHHHHHHHHHhhcc-ccHHHHHHhcCCCCchHHHHH
Confidence            5678899999999999999999999999999886433222234568899999999999 99999998886554     47


Q ss_pred             EEEEeccCcccHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          81 ILLLELLTSAVDSKIRESFGSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        81 ~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      |++.|++..+ |.+++-+..+++.+.+.-++.||+.++.|||..+|
T Consensus       133 YV~TELmQSD-LHKIIVSPQ~Ls~DHvKVFlYQILRGLKYLHsA~I  177 (449)
T KOG0664|consen  133 YVLTELMQSD-LHKIIVSPQALTPDHVKVFVYQILRGLKYLHTANI  177 (449)
T ss_pred             HHHHHHHHhh-hhheeccCCCCCcchhhhhHHHHHhhhHHHhhcch
Confidence            8899988777 88888877889999999999999999999998764

>KOG0614|consensus

Probab=99.60  E-value=7.2e-17  Score=108.99  Aligned_cols=121  Identities=18%  Similarity=0.245  Sum_probs=105.3

Q ss_pred             ccccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCchhHH-HHHHHHHHHHHhcCCCCceeeeeeeEeCCeEEEE
Q psy8006           5 KNIISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKA-EILHEVAVLEACRCNSRIVQLHQVFESSHDMILL   83 (126)
Q Consensus         5 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~-~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~~lv   83 (126)
                      .++.....||-|+||.|=..........+|+|++++.+.-+...+ ....|-.+|..+++ |.||++|..|.++.++|++
T Consensus       420 ~dl~~iaTLGvGgFGRVELV~~~~~~~~fAlKilkK~hIVdtkQqeHv~sEr~Im~~~~s-~fIvrLYrTfrd~kyvYmL  498 (732)
T KOG0614|consen  420 SDLKRIATLGVGGFGRVELVKVNSQKATFALKILKKKHIVDTKQQEHVFSERNIMMECRS-DFIVRLYRTFRDSKYVYML  498 (732)
T ss_pred             hhhhhhhhcccCccceEEEEEecccchHHHHHHHhHhhccchhHHHHHHhHHHHHHhcCc-hHHHHHHHHhccchhhhhh
Confidence            345556679999999998887766666789999998876443333 47889999999998 9999999999999999999


Q ss_pred             EeccCcccHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          84 LELLTSAVDSKIRESFGSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        84 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      ||-|-||.+..++..++.|.+..+++++..+++|++|||..+|
T Consensus       499 mEaClGGElWTiLrdRg~Fdd~tarF~~acv~EAfeYLH~k~i  541 (732)
T KOG0614|consen  499 MEACLGGELWTILRDRGSFDDYTARFYVACVLEAFEYLHRKGI  541 (732)
T ss_pred             HHhhcCchhhhhhhhcCCcccchhhhhHHHHHHHHHHHHhcCc
Confidence            9999999999999999999999999999999999999999875

>KOG0671|consensus

Probab=99.59  E-value=5.7e-15  Score=96.48  Aligned_cols=116  Identities=16%  Similarity=0.219  Sum_probs=95.3

Q ss_pred             ccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCC-C----CceeeeeeeEeCCeEE
Q psy8006           7 IISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCN-S----RIVQLHQVFESSHDMI   81 (126)
Q Consensus         7 ~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~-~----~iv~l~~~~~~~~~~~   81 (126)
                      |..-+.+|+|.||.|..|.+..++..+|+|+++.=.   ..+...+-|+++++++..+ |    .++++.++|.-.++.+
T Consensus        91 y~i~~~lGeGtFGkV~ec~D~~~~~~vAlKIik~V~---kYreAa~iEi~vLqki~~~DP~g~~rcv~m~~wFdyrghiC  167 (415)
T KOG0671|consen   91 YEIVDLLGEGTFGKVVECWDRETKEHVALKIIKNVD---KYREAALIEIEVLQKINESDPNGKFRCVQMRDWFDYRGHIC  167 (415)
T ss_pred             eehhhhhcCCcccceEEEeecCCCceehHHHHHHHH---HHhhHHHHHHHHHHHHHhcCCCCceEEEeeehhhhccCceE
Confidence            445568999999999999999999999999997532   2234577899999998431 2    4667778888899999


Q ss_pred             EEEeccCcccHHHHHHhcC--CCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          82 LLLELLTSAVDSKIRESFG--SKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        82 lv~e~~~~~~L~~~~~~~~--~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      ||+|.++.. +.++++.+.  +++...++.+.+|+++++++||++++
T Consensus       168 ivfellG~S-~~dFlk~N~y~~fpi~~ir~m~~QL~~sv~fLh~~kl  213 (415)
T KOG0671|consen  168 IVFELLGLS-TFDFLKENNYIPFPIDHIRHMGYQLLESVAFLHDLKL  213 (415)
T ss_pred             EEEeccChh-HHHHhccCCccccchHHHHHHHHHHHHHHHHHHhcce
Confidence            999987655 789998754  79999999999999999999999874

>KOG0596|consensus

Probab=99.58  E-value=1.5e-14  Score=98.51  Aligned_cols=120  Identities=13%  Similarity=0.059  Sum_probs=98.6

Q ss_pred             ccccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeEEEEE
Q psy8006           5 KNIISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLL   84 (126)
Q Consensus         5 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~~lv~   84 (126)
                      +.|...+.||.|+.+.||++.... ...+|+|.+.....+......+.+|+.+|.+++.+.+|++++++-..++++|+||
T Consensus       361 ~~Yeilk~iG~GGSSkV~kV~~s~-~~iyalkkv~~~~~D~qtl~gy~nEI~lL~KLkg~~~IIqL~DYEv~d~~lYmvm  439 (677)
T KOG0596|consen  361 REYEILKQIGSGGSSKVFKVLNSD-KQIYALKKVVLLEADNQTLDGYRNEIALLNKLKGHDKIIQLYDYEVTDGYLYMVM  439 (677)
T ss_pred             chhhHHHhhcCCCcceeeeeecCC-CcchhhhHHHHhhcCHHHHHHHHHHHHHHHHhcCCceEEEEeeeeccCceEEEEe
Confidence            346667899999999999998754 4557777776665555556679999999999998899999999999999999999


Q ss_pred             eccCcccHHHHHHhcCC-CCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          85 ELLTSAVDSKIRESFGS-KSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        85 e~~~~~~L~~~~~~~~~-~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      |+-+.+ |.++++.+.. ++...++++..|++.|+.++|+-||
T Consensus       440 E~Gd~D-L~kiL~k~~~~~~~~~lk~ywkqML~aV~~IH~~gI  481 (677)
T KOG0596|consen  440 ECGDID-LNKILKKKKSIDPDWFLKFYWKQMLLAVKTIHQHGI  481 (677)
T ss_pred             eccccc-HHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHhce
Confidence            966665 9999987543 3335789999999999999998775

>KOG0200|consensus

Probab=99.58  E-value=6.7e-14  Score=98.87  Aligned_cols=116  Identities=14%  Similarity=0.091  Sum_probs=98.1

Q ss_pred             ceeeccCccceeEEEEEEc---c----CCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeEE
Q psy8006           9 SSIINDMGKYATVRRCRDR---K----NGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMI   81 (126)
Q Consensus         9 ~~~~lg~g~~~~v~~~~~~---~----~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~~   81 (126)
                      ..+.+|+|+||.|++|.-.   .    ....||+|.+...... .....+..|+.+|+.+.+|+|++.+.+++...+..+
T Consensus       300 ~~~~lg~g~fG~v~~~~~~~~~~~~~~~~~~VaVK~~k~~~~~-~~~~~~~~El~~m~~~g~H~niv~llG~~t~~~~~~  378 (609)
T KOG0200|consen  300 LGKYLGEGAFGQVVKALLFGLSKALLSIYVTVAVKMLKENASS-SEKKDLMSELNVLKELGKHPNIVNLLGACTQDGPLY  378 (609)
T ss_pred             ccceeecccccceEeEEEeecccccccceEEEEEEecccccCc-HHHHHHHHHHHHHHHhcCCcchhhheeeeccCCceE
Confidence            3458999999999999732   1    1457999998876544 445679999999999987799999999999989999


Q ss_pred             EEEeccCcccHHHHHHhcC----------------CCCHHHHHHHHHHHHHHHHhhhccC
Q psy8006          82 LLLELLTSAVDSKIRESFG----------------SKSESGVQNCLEPSISVFSSLSKFE  125 (126)
Q Consensus        82 lv~e~~~~~~L~~~~~~~~----------------~~~~~~~~~~~~qi~~~l~~l~~~~  125 (126)
                      ++.||+..|+|..+++.++                .++..+...+..||+.+++||+...
T Consensus       379 ~v~Ey~~~G~L~~~Lr~~r~~~~~~~~~~~~~~~~~L~~~dLlsfa~QIa~GMe~L~~~~  438 (609)
T KOG0200|consen  379 VIVEYAEHGDLLEFLRKKRVTESIDGSGVFPNERDALTTKDLLSFAYQIANGMEYLASVP  438 (609)
T ss_pred             EEEEeccCCcHHHHHHhccccccccccCCCccccCCcCHHHHHHHHHHHHHHHHHHhhCC
Confidence            9999999999999987644                4888999999999999999998764

>KOG0984|consensus

Probab=99.57  E-value=1.4e-14  Score=88.42  Aligned_cols=117  Identities=15%  Similarity=0.183  Sum_probs=99.7

Q ss_pred             cccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeEEEEEe
Q psy8006           6 NIISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLLE   85 (126)
Q Consensus         6 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~~lv~e   85 (126)
                      .......||+|++|.|-+.++..+|...|+|.++.... .....+.++|+++.+....+|.+|.+|+.+...+..||.||
T Consensus        47 ~L~~i~elGrGayG~vekmrh~~sg~imAvKri~~tvn-~q~q~r~L~dldi~~r~~~CPf~V~FyGa~~regdvwIcME  125 (282)
T KOG0984|consen   47 DLVGIEELGRGAYGVVEKMRHIQSGTIMAVKRIRATVN-SQEQKRLLMDLDIIMRTVDCPFTVHFYGALFREGDVWICME  125 (282)
T ss_pred             hhhhhhhhcCCccchhhheeeccCCeEEEEeeehhhcC-hHHHHHHHHhhhhhccCCCCCeEEEeehhhhccccEEEeHH
Confidence            34456789999999999999999999999999987654 34455789999988887777999999999999999999999


Q ss_pred             ccCcccHHHH----HHhcCCCCHHHHHHHHHHHHHHHHhhhcc
Q psy8006          86 LLTSAVDSKI----RESFGSKSESGVQNCLEPSISVFSSLSKF  124 (126)
Q Consensus        86 ~~~~~~L~~~----~~~~~~~~~~~~~~~~~qi~~~l~~l~~~  124 (126)
                      .|+.. |..+    ++..+.++|..+-.++-.++.|+.|||+.
T Consensus       126 ~M~tS-ldkfy~~v~~~g~~ipE~vlGkIa~Svv~al~~L~~k  167 (282)
T KOG0984|consen  126 LMDTS-LDKFYRKVLKKGGTIPEDVLGKIAVSVVHALEFLHSK  167 (282)
T ss_pred             Hhhhh-HHHHHHHHHhcCCcCchHHhhHhHHHHHHHHHHHHHH
Confidence            99887 5443    45567899999999999999999999963

>PLN03224 probable serine/threonine protein kinase; Provisional

Probab=99.54  E-value=2.4e-13  Score=93.94  Aligned_cols=124  Identities=7%  Similarity=0.031  Sum_probs=85.2

Q ss_pred             ccccccceeeccCccceeEEEEEEc----------------cCCcEEEEEEeecCCCCc------------hhHHHHHHH
Q psy8006           3 NIKNIISSIINDMGKYATVRRCRDR----------------KNGTQYAAKFLRKKRRST------------DLKAEILHE   54 (126)
Q Consensus         3 ~~~~~~~~~~lg~g~~~~v~~~~~~----------------~~~~~~aiK~~~~~~~~~------------~~~~~~~~e   54 (126)
                      +.++|...+.||+|+||.||+|...                ..++.+|+|.+.......            ........|
T Consensus       143 ~~d~F~i~~~LG~GgFG~VYkG~~~~~~~~~v~~~~~~~~~~~~r~VAVK~l~~~~~~~~~~fl~e~~~~~~~~e~~~vE  222 (507)
T PLN03224        143 SSDDFQLRDKLGGGNFGITFEGLRLQADDQGVTQRSKLTAEQKKRRVVLKRVNMDRQGVRQDFLKTGTLAKGSAETGMVE  222 (507)
T ss_pred             cccCceEeeEeecCCCeEEEEEEecccccchhhhhccccccccCceEEEEEecccchhhHHHHHhhhhhhhcccchhHHH
Confidence            4568889999999999999999642                345679999986532110            001123446


Q ss_pred             HHHHHHhcCCC----CceeeeeeeE--------eCCeEEEEEeccCcccHHHHHHhcC----------------------
Q psy8006          55 VAVLEACRCNS----RIVQLHQVFE--------SSHDMILLLELLTSAVDSKIRESFG----------------------  100 (126)
Q Consensus        55 ~~~l~~~~~~~----~iv~l~~~~~--------~~~~~~lv~e~~~~~~L~~~~~~~~----------------------  100 (126)
                      +..+.++++++    +++.+.+++.        ..+..++|+||+++++|.+++....                      
T Consensus       223 ~~~l~~l~~~~l~~~~~~~~lg~~~~~~~~g~~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~L~e~l~~g~~l~~~~~  302 (507)
T PLN03224        223 AYMCAKIKRNPIAAASCAEYLGYFTSNTADGAFTKGSQWLVWKFESDATLGDALDGKLGPFPGCLEEFMMAGKKIPDNMP  302 (507)
T ss_pred             HHHHHHhhcccchhhhhhhhhhhcccccccccccCCceEEEEEcCCCCcHHHHHhhccCCCcchHHHHHhcCCchhhhcc
Confidence            66677776632    2345555543        2346899999999999988775311                      


Q ss_pred             --CCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006         101 --SKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus       101 --~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                        .++...++.++.|++.++.|||+.++
T Consensus       303 ~~~~~~~~~~~i~~ql~~aL~~lH~~~i  330 (507)
T PLN03224        303 QDKRDINVIKGVMRQVLTGLRKLHRIGI  330 (507)
T ss_pred             cccCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence              23456788899999999999998763

>smart00090 RIO RIO-like kinase

Probab=99.54  E-value=1.5e-13  Score=86.92  Aligned_cols=115  Identities=14%  Similarity=-0.006  Sum_probs=83.8

Q ss_pred             ccceeeccCccceeEEEEE-EccCCcEEEEEEeecCCCCch----------------------hHHHHHHHHHHHHHhcC
Q psy8006           7 IISSIINDMGKYATVRRCR-DRKNGTQYAAKFLRKKRRSTD----------------------LKAEILHEVAVLEACRC   63 (126)
Q Consensus         7 ~~~~~~lg~g~~~~v~~~~-~~~~~~~~aiK~~~~~~~~~~----------------------~~~~~~~e~~~l~~~~~   63 (126)
                      |...+.||+|++|.||+|. +..+|..+|+|.++.......                      ....+.+|+..+.++.+
T Consensus        30 ~~i~~~Lg~G~~g~Vy~a~~~~~~g~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~L~~L~~  109 (237)
T smart00090       30 SAIGGCISTGKEANVYHALDFDGSGKERAVKIYRTGTLEFKRRDRYVDGDFRFKYRKINPRKLVRLWAEKEFRNLQRLYE  109 (237)
T ss_pred             HHhCCeeccCcceeEEEEEecCCCCcEEEEEEEEcCcceecchhhhcccchhhccCCCCHHHHHHHHHHHHHHHHHHHHh
Confidence            4456789999999999998 777899999999986532100                      11235789999999975


Q ss_pred             C-CCceeeeeeeEeCCeEEEEEeccCcccHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhhccC
Q psy8006          64 N-SRIVQLHQVFESSHDMILLLELLTSAVDSKIRESFGSKSESGVQNCLEPSISVFSSLSKFE  125 (126)
Q Consensus        64 ~-~~iv~l~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~l~~~~  125 (126)
                      + ..++++++   . ...++||||++++++.........+....+..++.|++.++.+||+.+
T Consensus       110 ~~i~~p~~~~---~-~~~~lV~E~~~g~~L~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~g  168 (237)
T smart00090      110 AGVPVPKPIA---W-RRNVLVMEFIGGDGLPAPRLKDVEPEEEEEFELYDDILEEMRKLYKEG  168 (237)
T ss_pred             cCCCCCeeeE---e-cCceEEEEEecCCcccccccccCCcchHHHHHHHHHHHHHHHHHHhcC
Confidence            1 22333332   2 235899999999887655433445667777899999999999999876

>KOG3653|consensus

Probab=99.54  E-value=3.8e-14  Score=94.94  Aligned_cols=110  Identities=12%  Similarity=0.115  Sum_probs=91.1

Q ss_pred             ccccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCchhHHHHHHHHHHHHH--hcCCCCceeeeeeeEeCC----
Q psy8006           5 KNIISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEA--CRCNSRIVQLHQVFESSH----   78 (126)
Q Consensus         5 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~--~~~~~~iv~l~~~~~~~~----   78 (126)
                      .++...+++|+|.||.||+|...  ++.||||++....     .+.|..|-++..-  ++| +||+++++.-....    
T Consensus       210 ~pl~l~eli~~Grfg~V~KaqL~--~~~VAVKifp~~~-----kqs~~~Ek~Iy~lp~m~h-~nIl~Fi~~ekr~t~~~~  281 (534)
T KOG3653|consen  210 DPLQLLELIGRGRFGCVWKAQLD--NRLVAVKIFPEQE-----KQSFQNEKNIYSLPGMKH-ENILQFIGAEKRGTADRM  281 (534)
T ss_pred             CchhhHHHhhcCccceeehhhcc--CceeEEEecCHHH-----HHHHHhHHHHHhccCccc-hhHHHhhchhccCCcccc
Confidence            44556778999999999999864  5899999997542     4457777766654  567 99999998876544    


Q ss_pred             eEEEEEeccCcccHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhhc
Q psy8006          79 DMILLLELLTSAVDSKIRESFGSKSESGVQNCLEPSISVFSSLSK  123 (126)
Q Consensus        79 ~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~l~~  123 (126)
                      .++||++|-+.|+|.++++. ..++-.....++..++++|+|||.
T Consensus       282 eywLVt~fh~kGsL~dyL~~-ntisw~~~cria~SmarGLa~LHe  325 (534)
T KOG3653|consen  282 EYWLVTEFHPKGSLCDYLKA-NTISWNSLCRIAESMARGLAHLHE  325 (534)
T ss_pred             ceeEEeeeccCCcHHHHHHh-ccccHHHHHHHHHHHHHHHHHhcc
Confidence            78999999999999999996 568888999999999999999996

>PRK14879 serine/threonine protein kinase; Provisional

Probab=99.51  E-value=8.4e-13  Score=81.99  Aligned_cols=109  Identities=13%  Similarity=0.074  Sum_probs=84.8

Q ss_pred             eeccCccceeEEEEEEccCCcEEEEEEeecCCCCch------hHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeEEEEE
Q psy8006          11 IINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTD------LKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLL   84 (126)
Q Consensus        11 ~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~------~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~~lv~   84 (126)
                      +.||+|++|.||+|..  .+..+++|...+......      ....+.+|+.++..+.+ ++++....++......+++|
T Consensus         2 ~~l~~G~~~~vy~~~~--~~~~~~vK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~-~~i~~p~~~~~~~~~~~lv~   78 (211)
T PRK14879          2 KLIKRGAEAEIYLGDF--LGIKAVIKWRIPKRYRHPELDERIRRERTRREARIMSRARK-AGVNVPAVYFVDPENFIIVM   78 (211)
T ss_pred             cccccCceEEEEEEee--CCCceEEEEeCCcCCcChHHHHHHHHHHHHHHHHHHHHHHH-CCCCCCeEEEEeCCCCEEEE
Confidence            4689999999999987  567789998765432111      12347889999999988 78776666666677789999


Q ss_pred             eccCcccHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          85 ELLTSAVDSKIRESFGSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        85 e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      ||+++++|.+++....   . ....++.++..++.++|..++
T Consensus        79 e~~~G~~L~~~~~~~~---~-~~~~i~~~i~~~l~~lH~~~i  116 (211)
T PRK14879         79 EYIEGEPLKDLINSNG---M-EELELSREIGRLVGKLHSAGI  116 (211)
T ss_pred             EEeCCcCHHHHHHhcc---H-HHHHHHHHHHHHHHHHHhCCc
Confidence            9999999988886532   2 778899999999999998753

>KOG0669|consensus

Probab=99.51  E-value=4.5e-16  Score=97.44  Aligned_cols=117  Identities=12%  Similarity=0.175  Sum_probs=93.7

Q ss_pred             ccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEe--------CC
Q psy8006           7 IISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFES--------SH   78 (126)
Q Consensus         7 ~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~--------~~   78 (126)
                      |..-..+|+|.||.||+|+.+.+++.||+|.+--..-..+....-.+|+.++..++| +|++.+.+.+..        ..
T Consensus        19 yek~~kigqGtfgeVFkAr~~n~~kkvalkkvlmeneKeGfpitalreikiL~~lkH-env~nliEic~tk~Tp~~r~r~   97 (376)
T KOG0669|consen   19 YEKLAKIGQGTFGEVFKARSKNTGKKVALKKVLMENEKEGFPITALREIKILQLLKH-ENVVNLIEICRTKATPTNRDRA   97 (376)
T ss_pred             HHHHHhcCCchHHHHHHHhhcCccchhHHHHHHHhccccCCcHHHHHHHHHHHHhcc-hhHHHHHHHHhhccCCcccccc
Confidence            344557999999999999999999999988654432222333357899999999999 999988887742        23


Q ss_pred             eEEEEEeccCcccHHHHHHhc-CCCCHHHHHHHHHHHHHHHHhhhccC
Q psy8006          79 DMILLLELLTSAVDSKIRESF-GSKSESGVQNCLEPSISVFSSLSKFE  125 (126)
Q Consensus        79 ~~~lv~e~~~~~~L~~~~~~~-~~~~~~~~~~~~~qi~~~l~~l~~~~  125 (126)
                      .+|+|+++|+.+ |.-++.+. ..++..++..++.++++++.|+|+..
T Consensus        98 t~ylVf~~cehD-LaGlLsn~~vr~sls~Ikk~Mk~Lm~GL~~iHr~k  144 (376)
T KOG0669|consen   98 TFYLVFDFCEHD-LAGLLSNRKVRFSLSEIKKVMKGLMNGLYYIHRNK  144 (376)
T ss_pred             eeeeeHHHhhhh-HHHHhcCccccccHHHHHHHHHHHHHHHHHHHHhh
Confidence            589999999998 77777654 57999999999999999999999864

>KOG0603|consensus

Probab=99.50  E-value=6.5e-14  Score=96.39  Aligned_cols=115  Identities=18%  Similarity=0.220  Sum_probs=94.4

Q ss_pred             ccccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeEEEEE
Q psy8006           5 KNIISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLL   84 (126)
Q Consensus         5 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~~lv~   84 (126)
                      ..|.....+|.|+|+.|..|.+..++...++|++.+...      ...+|+.++....+|||++++.+.+.++...|+||
T Consensus       322 ~~y~~~~~~~~gs~s~~~~~~~~~t~~~~~vkii~~~~~------~~~~e~~~~~~~~~h~niv~~~~v~~~~~~~~~v~  395 (612)
T KOG0603|consen  322 ESYEFREELGEGSFSAVKYCESSPTDQEPAVKIISKRAD------DNQDEIPISLLVRDHPNIVKSHDVYEDGKEIYLVM  395 (612)
T ss_pred             hhhccccccCCCCccceeeeeccccccchhheecccccc------ccccccchhhhhcCCCcceeecceecCCceeeeee
Confidence            345556669999999999999999999999999987632      24457766666665699999999999999999999


Q ss_pred             eccCcccHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          85 ELLTSAVDSKIRESFGSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        85 e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      |.+.++.+.+.+.....+. .++..|++|++.|+.|||..++
T Consensus       396 e~l~g~ell~ri~~~~~~~-~e~~~w~~~lv~Av~~LH~~gv  436 (612)
T KOG0603|consen  396 ELLDGGELLRRIRSKPEFC-SEASQWAAELVSAVDYLHEQGV  436 (612)
T ss_pred             hhccccHHHHHHHhcchhH-HHHHHHHHHHHHHHHHHHhcCe
Confidence            9999997766665444444 7888999999999999998763

>KOG1167|consensus

Probab=99.50  E-value=8.2e-14  Score=91.89  Aligned_cols=114  Identities=16%  Similarity=0.192  Sum_probs=99.8

Q ss_pred             cccceeeccCccceeEEEEEEcc---CCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeEEE
Q psy8006           6 NIISSIINDMGKYATVRRCRDRK---NGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMIL   82 (126)
Q Consensus         6 ~~~~~~~lg~g~~~~v~~~~~~~---~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~~l   82 (126)
                      .|...+.+|+|.|++||++.+..   .++.+|+|.+......    .+..+|++.+..+..+.|++.+.+++...+...+
T Consensus        37 ~~~~v~kigeGsFssv~~a~~~~~~~~~~~valk~i~~ts~p----~ri~~El~~L~~~gG~~ni~~~~~~~rnnd~v~i  112 (418)
T KOG1167|consen   37 AYKVVNKIGEGSFSSVYKATDIEQDTKRRYVALKAIYRTSSP----SRILNELEMLYRLGGSDNIIKLNGCFRNNDQVAI  112 (418)
T ss_pred             hhhhhccccccchhhhhhhhHhhhccccceEeeeecccccCc----hHHHHHHHHHHHhccchhhhcchhhhccCCeeEE
Confidence            45668899999999999998866   6788999999876432    3688999999999877999999999999999999


Q ss_pred             EEeccCcccHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          83 LLELLTSAVDSKIRESFGSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        83 v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      |+||++.....++...   ++..+++.+++.++.||+++|+.|+
T Consensus       113 vlp~~~H~~f~~l~~~---l~~~~i~~Yl~~ll~Al~~~h~~GI  153 (418)
T KOG1167|consen  113 VLPYFEHDRFRDLYRS---LSLAEIRWYLRNLLKALAHLHKNGI  153 (418)
T ss_pred             EecccCccCHHHHHhc---CCHHHHHHHHHHHHHHhhhhhccCc
Confidence            9999999987777765   6788899999999999999999986

>KOG0983|consensus

Probab=99.50  E-value=4.8e-14  Score=89.36  Aligned_cols=114  Identities=19%  Similarity=0.207  Sum_probs=96.1

Q ss_pred             cceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeEEEEEecc
Q psy8006           8 ISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLLELL   87 (126)
Q Consensus         8 ~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~~lv~e~~   87 (126)
                      ..-..+|.|+-|.|+++..+++|...|||.+++.... +..++.+..++++.....+|+||+++++|..+...++.||.|
T Consensus        95 ~~l~dlGsGtcG~V~k~~~rs~~~iiAVK~M~rt~Nk-ee~kRILmDldvv~~s~dcpyIV~c~GyFi~n~dV~IcMelM  173 (391)
T KOG0983|consen   95 ENLGDLGSGTCGQVWKMRFRSTGHIIAVKQMRRTGNK-EENKRILMDLDVVLKSHDCPYIVQCFGYFITNTDVFICMELM  173 (391)
T ss_pred             hhHHhhcCCCccceEEEEEcccceEEEEEeecccCCH-HHHHHHHHhhhHHhhccCCCeeeeeeeEEeeCchHHHHHHHH
Confidence            3345789999999999999999999999999987643 335578888988888875699999999999999999999988


Q ss_pred             CcccHHHHHHh-cCCCCHHHHHHHHHHHHHHHHhhhc
Q psy8006          88 TSAVDSKIRES-FGSKSESGVQNCLEPSISVFSSLSK  123 (126)
Q Consensus        88 ~~~~L~~~~~~-~~~~~~~~~~~~~~qi~~~l~~l~~  123 (126)
                      ..- +..++++ +++++|..+-++.-.++.||.||.+
T Consensus       174 s~C-~ekLlkrik~piPE~ilGk~tva~v~AL~YLKe  209 (391)
T KOG0983|consen  174 STC-AEKLLKRIKGPIPERILGKMTVAIVKALYYLKE  209 (391)
T ss_pred             HHH-HHHHHHHhcCCchHHhhhhhHHHHHHHHHHHHH
Confidence            665 5666654 5679999999999999999999965

>PHA02882 putative serine/threonine kinase; Provisional

Probab=99.49  E-value=2.1e-12  Score=84.03  Aligned_cols=120  Identities=12%  Similarity=0.093  Sum_probs=82.3

Q ss_pred             ccccceeeccCccceeEEEEEEccC---CcEEEEEEeecCCCCchhH---------HHHHHHHHHHHHhcCCCCceeeee
Q psy8006           5 KNIISSIINDMGKYATVRRCRDRKN---GTQYAAKFLRKKRRSTDLK---------AEILHEVAVLEACRCNSRIVQLHQ   72 (126)
Q Consensus         5 ~~~~~~~~lg~g~~~~v~~~~~~~~---~~~~aiK~~~~~~~~~~~~---------~~~~~e~~~l~~~~~~~~iv~l~~   72 (126)
                      ..|...+.||+|+||.||+|....+   +..+++|............         .....+...+..++| ++++.+++
T Consensus        12 ~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~~k~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~h-~~i~~~~~   90 (294)
T PHA02882         12 KEWKIDKLIGCGGFGCVYETQCASDHCINNQAVAKIENLENETIVMETLVYNNIYDIDKIALWKNIHNIDH-LGIPKYYG   90 (294)
T ss_pred             CceEEeeEEecCCCceEEEEEEcCCcccccceEEEeccccCCchhhHHHHHHhhhhHHHHHHHHHhccCCC-CCCCcEEE
Confidence            3577788999999999999998776   5667777654332110000         011122233445667 99999998


Q ss_pred             eeEeCC----eEEEEEeccCcccHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          73 VFESSH----DMILLLELLTSAVDSKIRESFGSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        73 ~~~~~~----~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      ......    ..+++++++... +.+.++.....++..+..++.|++.|++|||+.++
T Consensus        91 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i  147 (294)
T PHA02882         91 CGSFKRCRMYYRFILLEKLVEN-TKEIFKRIKCKNKKLIKNIMKDMLTTLEYIHEHGI  147 (294)
T ss_pred             eeeEecCCceEEEEEEehhccC-HHHHHHhhccCCHHHHHHHHHHHHHHHHHHHhCCe
Confidence            765433    457788877654 56666654557888999999999999999998763

>KOG1345|consensus

Probab=99.48  E-value=6.8e-14  Score=88.55  Aligned_cols=116  Identities=12%  Similarity=0.136  Sum_probs=96.5

Q ss_pred             cccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeee-eEeCCeEEEEE
Q psy8006           6 NIISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQV-FESSHDMILLL   84 (126)
Q Consensus         6 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~-~~~~~~~~lv~   84 (126)
                      .|...+.+|+|-||.+..++|++++..+++|.+.....   ....|.+|...--.+++|.||+.-|+. |.+.+....++
T Consensus        25 ~y~I~k~lgeG~FgkIlL~eHr~s~t~ivlKavp~p~t---t~~dF~rEfhY~~~Ls~H~hIi~tY~vaFqt~d~YvF~q  101 (378)
T KOG1345|consen   25 VYTINKQLGEGRFGKILLAEHRQSKTRIVLKAVPRPQT---TQADFVREFHYSFFLSPHQHIIDTYEVAFQTSDAYVFVQ  101 (378)
T ss_pred             hhhHHHHhcccceeeEEeeeccCCceEEEeeccCcchh---hHHHHHHHhccceeeccchhhhHHHHHHhhcCceEEEee
Confidence            45567889999999999999999999999999876543   244688998877778877999987654 67777888899


Q ss_pred             eccCcccHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhhccC
Q psy8006          85 ELLTSAVDSKIRESFGSKSESGVQNCLEPSISVFSSLSKFE  125 (126)
Q Consensus        85 e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~l~~~~  125 (126)
                      ||++.|+|..-+... .+.|.....++.|+++|++|+|...
T Consensus       102 E~aP~gdL~snv~~~-GigE~~~K~v~~ql~SAi~fMHskn  141 (378)
T KOG1345|consen  102 EFAPRGDLRSNVEAA-GIGEANTKKVFAQLLSAIEFMHSKN  141 (378)
T ss_pred             ccCccchhhhhcCcc-cccHHHHHHHHHHHHHHHHHhhccc
Confidence            999999998766653 4788888999999999999999864

>KOG1164|consensus

Probab=99.47  E-value=2.8e-12  Score=84.53  Aligned_cols=117  Identities=17%  Similarity=0.158  Sum_probs=93.5

Q ss_pred             cccceeeccCccceeEEEEEEccCC-cEEEEEEeecCCCCchhHHHHHHHHHHHHHhc---CCCCceeeeeee-EeCCeE
Q psy8006           6 NIISSIINDMGKYATVRRCRDRKNG-TQYAAKFLRKKRRSTDLKAEILHEVAVLEACR---CNSRIVQLHQVF-ESSHDM   80 (126)
Q Consensus         6 ~~~~~~~lg~g~~~~v~~~~~~~~~-~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~---~~~~iv~l~~~~-~~~~~~   80 (126)
                      .|...+.||+|+||.||.+.+...+ ..+|+|.......... . .+..|..++..+.   +.+++..+.+.. ....+-
T Consensus        19 ~~~i~~~iG~G~fG~V~~v~~~~~~~~~~a~K~e~~~~~~~~-~-~l~~E~~vl~~l~~~~~~~~~~~~~~~G~~~~~~~   96 (322)
T KOG1164|consen   19 RYKLGKKIGEGGFGAVYLVSDKSEKNKEYAKKLEKKELGSKP-S-VLKIEIQVLKKLEKKNGPSHFPKLLDHGRSTEDFN   96 (322)
T ss_pred             ceEEeeeccccCCceEEEEEecCCCCeeEEEEEEEecccCCC-c-cchhHHHHHHHHhhhcCCCCCCEEEEeccCCCcee
Confidence            6788899999999999999987765 5788888876533221 1 5677888888876   236888888888 477789


Q ss_pred             EEEEeccCcccHHHHHHhc--CCCCHHHHHHHHHHHHHHHHhhhccC
Q psy8006          81 ILLLELLTSAVDSKIRESF--GSKSESGVQNCLEPSISVFSSLSKFE  125 (126)
Q Consensus        81 ~lv~e~~~~~~L~~~~~~~--~~~~~~~~~~~~~qi~~~l~~l~~~~  125 (126)
                      |+||+.+..+ |.++.+..  +.++..++..++.|++.+|++||+.|
T Consensus        97 ~iVM~l~G~s-L~dl~~~~~~~~fs~~T~l~ia~q~l~~l~~lH~~G  142 (322)
T KOG1164|consen   97 FIVMSLLGPS-LEDLRKRNPPGRFSRKTVLRIAIQNLNALEDLHSKG  142 (322)
T ss_pred             EEEEeccCcc-HHHHHHhCCCCCcCHhHHHHHHHHHHHHHHHHHhcC
Confidence            9999977555 88877543  57999999999999999999999876

>KOG1163|consensus

Probab=99.45  E-value=2.3e-12  Score=80.58  Aligned_cols=116  Identities=12%  Similarity=0.056  Sum_probs=95.3

Q ss_pred             ccccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeEEEEE
Q psy8006           5 KNIISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLL   84 (126)
Q Consensus         5 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~~lv~   84 (126)
                      .+|...+.||+|+||.+|.|....+|..||+|.-......    ..+..|..+...+++...++.+..+.....+-.+||
T Consensus        15 gky~lvrkiGsGSFGdIy~~~~i~~ge~VAiK~Es~~a~h----pqL~yEskvY~iL~~g~GiP~i~~y~~e~~ynvlVM   90 (341)
T KOG1163|consen   15 GKYKLVRKIGSGSFGDIYLGISITSGEEVAIKLESSKAKH----PQLLYESKVYRILQGGVGIPHIRHYGTEKDYNVLVM   90 (341)
T ss_pred             cceEEEEeecCCchhheeeeeeccCCceEEEEeecccCCC----cchhHHHHHHHHhccCCCCchhhhhccccccceeee
Confidence            4567788999999999999999999999999987665432    157788889999987678888877777777889999


Q ss_pred             eccCcccHHHHHHh-cCCCCHHHHHHHHHHHHHHHHhhhccC
Q psy8006          85 ELLTSAVDSKIRES-FGSKSESGVQNCLEPSISVFSSLSKFE  125 (126)
Q Consensus        85 e~~~~~~L~~~~~~-~~~~~~~~~~~~~~qi~~~l~~l~~~~  125 (126)
                      |++... |.++..- ...|+..+++.++-|++.-++|+|...
T Consensus        91 dLLGPs-LEdLfnfC~R~ftmkTvLMLaDQml~RiEyvH~r~  131 (341)
T KOG1163|consen   91 DLLGPS-LEDLFNFCSRRFTMKTVLMLADQMLSRIEYVHLRN  131 (341)
T ss_pred             eccCcc-HHHHHHHHhhhhhHHhHHHHHHHHHHHHHHHHhhc
Confidence            988665 7776653 246899999999999999999999753

>TIGR03724 arch_bud32 Kae1-associated kinase Bud32

Probab=99.44  E-value=3e-12  Score=78.90  Aligned_cols=105  Identities=12%  Similarity=0.019  Sum_probs=77.2

Q ss_pred             eccCccceeEEEEEEccCCcEEEEEEeecCCCCc-h-----hHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeEEEEEe
Q psy8006          12 INDMGKYATVRRCRDRKNGTQYAAKFLRKKRRST-D-----LKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLLE   85 (126)
Q Consensus        12 ~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~-~-----~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~~lv~e   85 (126)
                      .||+|++|.||++..  .+..+++|......... .     ...++.+|+.++..+.+ +++..........+..+++||
T Consensus         1 ~ig~G~~~~vy~~~~--~~~~~viK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~-~~i~~p~~~~~~~~~~~lv~e   77 (199)
T TIGR03724         1 LIAKGAEAIIYLGDF--LGLKAVIKERVPKSYRHPELDERIRRERTRNEARLLSRARK-AGVNTPVVYDVDPDNKTIVME   77 (199)
T ss_pred             CCCCCceEEEEEeec--CCccEEEEEecCCcCcCchHHHHHHHHHHHHHHHHHHHHHH-CCCCCCEEEEEECCCCEEEEE
Confidence            479999999999984  56789999866543211 1     12347789999999987 655444444445666789999


Q ss_pred             ccCcccHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          86 LLTSAVDSKIRESFGSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        86 ~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      |+++++|.+++.....       .++.|++.++.+||+.++
T Consensus        78 ~~~g~~l~~~~~~~~~-------~~~~~i~~~l~~lH~~gi  111 (199)
T TIGR03724        78 YIEGKPLKDVIEEGND-------ELLREIGRLVGKLHKAGI  111 (199)
T ss_pred             EECCccHHHHHhhcHH-------HHHHHHHHHHHHHHHCCe
Confidence            9999999887764221       788999999999998763

Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.

>PLN03225 Serine/threonine-protein kinase SNT7; Provisional

Probab=99.42  E-value=2.5e-12  Score=90.32  Aligned_cols=116  Identities=8%  Similarity=0.035  Sum_probs=77.0

Q ss_pred             cccccceeeccCccceeEEEEEEccC----CcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeee------
Q psy8006           4 IKNIISSIINDMGKYATVRRCRDRKN----GTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQV------   73 (126)
Q Consensus         4 ~~~~~~~~~lg~g~~~~v~~~~~~~~----~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~------   73 (126)
                      .++|...+.||+|+||.||+|.+..+    +..+|+|.+......    ..+..+.  +....+ .++..+...      
T Consensus       131 ~~~y~l~~~LG~G~FG~VYka~~~~~~~~~~~~vAvK~~~~~~~~----e~~~~e~--l~~~~~-~~~~~~~~~~~~~~~  203 (566)
T PLN03225        131 KDDFVLGKKLGEGAFGVVYKASLVNKQSKKEGKYVLKKATEYGAV----EIWMNER--VRRACP-NSCADFVYGFLEPVS  203 (566)
T ss_pred             cCCeEEeEEEeeCCCeEEEEEEEcCCccccCcEEEEEEecccchh----HHHHHHH--HHhhch-hhHHHHHHhhhcccc
Confidence            46788889999999999999999888    899999987643211    1111111  111111 111111111      


Q ss_pred             eEeCCeEEEEEeccCcccHHHHHHhcC-C-------------------CCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          74 FESSHDMILLLELLTSAVDSKIRESFG-S-------------------KSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        74 ~~~~~~~~lv~e~~~~~~L~~~~~~~~-~-------------------~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      .......++++||+++++|.+++.... .                   ..+..+..++.|++.||+|||+.++
T Consensus       204 ~~~~~~~~LV~ey~~~gsL~~~l~~~~~~~~v~~~l~~~~~~l~~~~~r~~~~i~~i~~qll~aL~yLH~~gI  276 (566)
T PLN03225        204 SKKEDEYWLVWRYEGESTLADLMQSKEFPYNVEPYLLGKVQDLPKGLERENKIIQTIMRQILFALDGLHSTGI  276 (566)
T ss_pred             cccCCceEEEEEecCCCcHHHHHHhcCCchhHHHHhccchhhccccchhhHHHHHHHHHHHHHHHHHHHHCCE
Confidence            234557899999999999988886432 1                   1233466899999999999998764

>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional

Probab=99.41  E-value=8e-12  Score=78.39  Aligned_cols=110  Identities=16%  Similarity=0.158  Sum_probs=83.7

Q ss_pred             cccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCchhH-HH------HHHHHHHHHHhcCCCCceeeeeeeEeC-
Q psy8006           6 NIISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLK-AE------ILHEVAVLEACRCNSRIVQLHQVFESS-   77 (126)
Q Consensus         6 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~-~~------~~~e~~~l~~~~~~~~iv~l~~~~~~~-   77 (126)
                      +|...+++|+|+||.||...+  ++..+++|.+++.....+.. ..      +.+|+..+.++.| |++..+.+.+... 
T Consensus        32 ~y~~~~~l~~~~f~~v~l~~~--~~~~~iiKvf~~~~~~~~~~~~~f~~g~~~e~Ea~~l~rL~~-~GI~~~~d~~~~~~  108 (232)
T PRK10359         32 NIKTIKVFRNIDDTKVSLIDT--DYGKYILKVFAPKVKRTERFLKSFVKGDYYENLIVQTDRVRS-EGLASLNDFYLLAE  108 (232)
T ss_pred             ceEEEEEecCCCceEEEEEec--CCCcEEEEEechhcCchHHHHHhhhhhHHHHHHHHHHHHHHH-CCCCcceEeeeecc
Confidence            466788999999999999755  36679999998765433221 12      5788889999988 9999988775533 


Q ss_pred             -------CeEEEEEeccCcccHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          78 -------HDMILLLELLTSAVDSKIRESFGSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        78 -------~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                             +..+++|||++|.+|.++..    +++    ....++..++..+|+.++
T Consensus       109 ~~~~~~~~~~~lvmEyi~G~tL~~~~~----~~~----~~~~~i~~~l~~lH~~gi  156 (232)
T PRK10359        109 RKTLRYAHTYIMLIEYIEGVELNDMPE----ISE----DVKAKIKASIESLHQHGM  156 (232)
T ss_pred             cccccccCCeEEEEEEECCccHHHhhh----ccH----HHHHHHHHHHHHHHHcCC
Confidence                   35889999999999977632    333    245689999999999764

>KOG1165|consensus

Probab=99.40  E-value=4.7e-12  Score=82.30  Aligned_cols=114  Identities=14%  Similarity=0.062  Sum_probs=93.1

Q ss_pred             cccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeEEEEEe
Q psy8006           6 NIISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLLE   85 (126)
Q Consensus         6 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~~lv~e   85 (126)
                      +|..++.||+|+||..+.|.+.-++..||||.-....-.+    ++.-|....+.+.+.++|...+..-..+-+-.+|+|
T Consensus        29 hyrVGkKIGeGsFG~lf~G~Nl~nne~VAIKfEPrkS~AP----QLrdEYr~YKlL~g~~GIP~vYYFGqeG~~NiLVid  104 (449)
T KOG1165|consen   29 HYRVGKKIGEGSFGVLFLGKNLYNNEPVAIKFEPRKSEAP----QLRDEYRTYKLLGGTEGIPQVYYFGQEGKYNILVID  104 (449)
T ss_pred             cceeccccccCcceeeecccccccCceEEEEeccccCCcc----hHHHHHHHHHHHcCCCCCCceeeeccccchhhhhhh
Confidence            4778999999999999999999999999999776543222    466777788888777999998866666667789999


Q ss_pred             ccCcccHHHHHHh-cCCCCHHHHHHHHHHHHHHHHhhhcc
Q psy8006          86 LLTSAVDSKIRES-FGSKSESGVQNCLEPSISVFSSLSKF  124 (126)
Q Consensus        86 ~~~~~~L~~~~~~-~~~~~~~~~~~~~~qi~~~l~~l~~~  124 (126)
                      ++... |.++..- .+.|+..+++.++.|++.-++|+|..
T Consensus       105 LLGPS-LEDLFD~CgR~FSvKTV~miA~Qmi~rie~vH~k  143 (449)
T KOG1165|consen  105 LLGPS-LEDLFDLCGRRFSVKTVAMIAKQMITRIEYVHEK  143 (449)
T ss_pred             hhCcC-HHHHHHHhcCcccHHhHHHHHHHHHHHHHHHHhc
Confidence            88665 7776653 35799999999999999999999975

>KOG1166|consensus

Probab=99.38  E-value=1.2e-12  Score=95.11  Aligned_cols=114  Identities=13%  Similarity=0.035  Sum_probs=91.6

Q ss_pred             ccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhc--CCCCceeeeeeeEeCCeEEEEE
Q psy8006           7 IISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACR--CNSRIVQLHQVFESSHDMILLL   84 (126)
Q Consensus         7 ~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~--~~~~iv~l~~~~~~~~~~~lv~   84 (126)
                      |...+.+|+|++|+||+|.+.. |+.+|+|+-.+...++=     ..=..++.+++  --+.+..+..++...+..++|+
T Consensus       700 ~~I~~e~G~g~y~~vy~a~~~~-~~~~alK~e~P~~~WEf-----YI~~q~~~RLk~~~~~~~~~~~~a~~~~~~S~lv~  773 (974)
T KOG1166|consen  700 FCISKEIGEGSYGSVYVATHSN-GKLVALKVEKPPNPWEF-----YICLQVMERLKPQMLPSIMHISSAHVFQNASVLVS  773 (974)
T ss_pred             EEEEeeeccccceEEEEeecCC-CcEEEEEeecCCCceee-----eehHHHHHhhchhhhcchHHHHHHHccCCcceeee
Confidence            5567899999999999999987 99999999988876531     11111222222  1156677777777788889999


Q ss_pred             eccCcccHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          85 ELLTSAVDSKIRESFGSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        85 e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      ||.+.|+|.+++.....+++..+..+..|++..++.||..+|
T Consensus       774 ey~~~Gtlld~~N~~~~m~e~lv~~~~~qml~ive~lH~~~I  815 (974)
T KOG1166|consen  774 EYSPYGTLLDLINTNKVMDEYLVMFFSCQMLRIVEHLHAMGI  815 (974)
T ss_pred             eccccccHHHhhccCCCCCchhhhHHHHHHHHHHHHHHhcce
Confidence            999999999999987889999999999999999999999886

>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated

Probab=99.36  E-value=2.6e-11  Score=84.85  Aligned_cols=108  Identities=12%  Similarity=0.051  Sum_probs=80.1

Q ss_pred             cceeeccCccceeEEEEEEccCCcEEEEEEeecCCCC-----ch-hHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeEE
Q psy8006           8 ISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRS-----TD-LKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMI   81 (126)
Q Consensus         8 ~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~-----~~-~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~~   81 (126)
                      ...+.||+|+||.||++.....  .+++|........     .. ....+.+|+.++..+++ ++++........+...+
T Consensus       336 ~~~~~iG~G~~g~Vy~~~~~~~--~~v~k~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~-~~i~~p~~~~~~~~~~~  412 (535)
T PRK09605        336 IPDHLIGKGAEADIKKGEYLGR--DAVIKERVPKGYRHPELDERLRTERTRAEARLLSEARR-AGVPTPVIYDVDPEEKT  412 (535)
T ss_pred             CccceeccCCcEEEEEEeecCc--cceeEEEecccccchhHHHHHHHHHHHHHHHHHHhhcc-cCCCeeEEEEEeCCCCE
Confidence            4578899999999999876433  3444433222111     11 12358899999999998 88887666666666788


Q ss_pred             EEEeccCcccHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          82 LLLELLTSAVDSKIRESFGSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        82 lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      ++|||+++++|.+++.        ....++.|++.++.+||+.++
T Consensus       413 lv~E~~~g~~L~~~l~--------~~~~~~~~i~~~L~~lH~~gi  449 (535)
T PRK09605        413 IVMEYIGGKDLKDVLE--------GNPELVRKVGEIVAKLHKAGI  449 (535)
T ss_pred             EEEEecCCCcHHHHHH--------HHHHHHHHHHHHHHHHHhCCC
Confidence            9999999999987775        346788999999999998764

>KOG1027|consensus

Probab=99.35  E-value=1.5e-12  Score=92.26  Aligned_cols=112  Identities=19%  Similarity=0.145  Sum_probs=89.7

Q ss_pred             ccceeeccCcccee-EEEEEEccCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeEEEEEe
Q psy8006           7 IISSIINDMGKYAT-VRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLLE   85 (126)
Q Consensus         7 ~~~~~~lg~g~~~~-v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~~lv~e   85 (126)
                      +.+.+++|.|+-|+ ||+|...  ++.||||.+-...     ..-..+|+.+++..+.||||++++..-.+..+.||..|
T Consensus       511 ~~~~eilG~Gs~Gt~Vf~G~ye--~R~VAVKrll~e~-----~~~A~rEi~lL~eSD~H~NviRyyc~E~d~qF~YIalE  583 (903)
T KOG1027|consen  511 FSPKEILGYGSNGTVVFRGVYE--GREVAVKRLLEEF-----FDFAQREIQLLQESDEHPNVIRYYCSEQDRQFLYIALE  583 (903)
T ss_pred             eccHHHcccCCCCcEEEEEeeC--CceehHHHHhhHh-----HHHHHHHHHHHHhccCCCceEEEEeeccCCceEEEEeh
Confidence            45677888888776 7888764  6789999886543     33578999999999877999999998888999999999


Q ss_pred             ccCcccHHHHHHhcC----CCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          86 LLTSAVDSKIRESFG----SKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        86 ~~~~~~L~~~~~~~~----~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      +|... |.+++....    ....-..+.++.|+++|+++||..+|
T Consensus       584 LC~~s-L~dlie~~~~d~~~~~~i~~~~~l~q~~~GlaHLHsl~i  627 (903)
T KOG1027|consen  584 LCACS-LQDLIESSGLDVEMQSDIDPISVLSQIASGLAHLHSLKI  627 (903)
T ss_pred             Hhhhh-HHHHHhccccchhhcccccHHHHHHHHHHHHHHHHhccc
Confidence            99888 999987631    11113457889999999999999765

>KOG0670|consensus

Probab=99.30  E-value=1.3e-11  Score=84.38  Aligned_cols=116  Identities=19%  Similarity=0.278  Sum_probs=96.7

Q ss_pred             ccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcC-----CCCceeeeeeeEeCCeEE
Q psy8006           7 IISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRC-----NSRIVQLHQVFESSHDMI   81 (126)
Q Consensus         7 ~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~-----~~~iv~l~~~~~~~~~~~   81 (126)
                      |......|+|.|+.|..|.+...|..||||+|+.+..   ..+.=++|+++|.+++.     .-|++.++..|...++++
T Consensus       434 Y~V~~~~GkGvFs~Vvra~D~~r~~~vAiKIIRnNE~---M~KtGl~EleiLkKL~~AD~Edk~Hclrl~r~F~hknHLC  510 (752)
T KOG0670|consen  434 YEVQGYTGKGVFSTVVRARDQARGQEVAIKIIRNNEV---MHKTGLKELEILKKLNDADPEDKFHCLRLFRHFKHKNHLC  510 (752)
T ss_pred             eEEEeccccceeeeeeeccccCCCCeeEEEEeecchH---HhhhhhHHHHHHHHhhccCchhhhHHHHHHHHhhhcceeE
Confidence            4445578999999999999999999999999997643   34456789999999874     137889999999999999


Q ss_pred             EEEeccCcccHHHHHHhcC---CCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          82 LLLELLTSAVDSKIRESFG---SKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        82 lv~e~~~~~~L~~~~~~~~---~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      +|+|-+.-. |..+++..+   .+....++.+..|+..||..|.+.++
T Consensus       511 lVFE~LslN-LRevLKKyG~nvGL~ikaVRsYaqQLflALklLK~c~v  557 (752)
T KOG0670|consen  511 LVFEPLSLN-LREVLKKYGRNVGLHIKAVRSYAQQLFLALKLLKKCGV  557 (752)
T ss_pred             EEehhhhch-HHHHHHHhCcccceeehHHHHHHHHHHHHHHHHHhcCe
Confidence            999987776 888888643   58888999999999999999987663

>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]

Probab=99.27  E-value=7.8e-10  Score=71.62  Aligned_cols=116  Identities=23%  Similarity=0.247  Sum_probs=97.5

Q ss_pred             ccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCch-hHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeEEEEEe
Q psy8006           7 IISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTD-LKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLLE   85 (126)
Q Consensus         7 ~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~-~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~~lv~e   85 (126)
                      |...+.+|.|+|+.||.+.+.   ..+++|.+........ ....+.+|+.++..+.++++++++.+.+......+++++
T Consensus         2 ~~~~~~l~~g~~~~v~~~~~~---~~~~~k~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~   78 (384)
T COG0515           2 YRILRKLGEGSFGEVYLARDR---KLVALKVLAKKLESKSKEVERFLREIQILASLNHPPNIVKLYDFFQDEGSLYLVME   78 (384)
T ss_pred             ceeEEeecCCCCeEEEEEEec---cEEEEEeechhhccchhHHHHHHHHHHHHHHccCCcceeeEEEEEecCCEEEEEEe
Confidence            345667899999999999887   6789999987665443 355699999999999983479999999977777899999


Q ss_pred             ccCcccHHHHHHhcC---CCCHHHHHHHHHHHHHHHHhhhccC
Q psy8006          86 LLTSAVDSKIRESFG---SKSESGVQNCLEPSISVFSSLSKFE  125 (126)
Q Consensus        86 ~~~~~~L~~~~~~~~---~~~~~~~~~~~~qi~~~l~~l~~~~  125 (126)
                      ++.++++.+++....   .+++..+..++.|++.++.++|+.+
T Consensus        79 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~H~~~  121 (384)
T COG0515          79 YVDGGSLEDLLKKIGRKGPLSESEALFILAQILSALEYLHSKG  121 (384)
T ss_pred             cCCCCcHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            999999987777654   7999999999999999999999875

>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain

Probab=99.25  E-value=1e-10  Score=72.15  Aligned_cols=108  Identities=18%  Similarity=0.117  Sum_probs=76.6

Q ss_pred             ccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCch--------------------hHHHHHHHHHHHHHhcCCCC
Q psy8006           7 IISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTD--------------------LKAEILHEVAVLEACRCNSR   66 (126)
Q Consensus         7 ~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~--------------------~~~~~~~e~~~l~~~~~~~~   66 (126)
                      +...+.||+|+||.||++... ++..+|+|+++.......                    ......+|..++..+.+ ++
T Consensus        17 ~~~~~~i~~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~-~~   94 (198)
T cd05144          17 ESLGNQIGVGKESDVYLALDP-DGNPVALKFHRLGRTSFRKVKRKRDYLGDRKHASWLYLSRLAAQKEFAALKALYE-EG   94 (198)
T ss_pred             hhcCCccccCcceEEEEEEcC-CCCEEEEEEEecccchhhhhcchHHHHhccccchhHHHhHHHHHHHHHHHHHHHH-cC
Confidence            445678999999999999874 799999999876431100                    01125678888888876 53


Q ss_pred             --ceeeeeeeEeCCeEEEEEeccCcccHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          67 --IVQLHQVFESSHDMILLLELLTSAVDSKIRESFGSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        67 --iv~l~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                        ++...+    ....+++|||+++++|..+...      .....++.+++.++.++|..++
T Consensus        95 i~v~~~~~----~~~~~lv~e~~~g~~L~~~~~~------~~~~~~~~~i~~~l~~lh~~gi  146 (198)
T cd05144          95 FPVPKPID----WNRHAVVMEYIDGVELYRVRVL------EDPEEVLDEILEEIVKAYKHGI  146 (198)
T ss_pred             CCCCceee----cCCceEEEEEeCCcchhhcccc------ccHHHHHHHHHHHHHHHHHCCC
Confidence              333332    3446899999999988654331      3456788999999999998764

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom

>PRK12274 serine/threonine protein kinase; Provisional

Probab=99.24  E-value=2.4e-10  Score=70.77  Aligned_cols=106  Identities=9%  Similarity=-0.030  Sum_probs=76.9

Q ss_pred             cceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCchh-HH-HHHHHHHHHHHhcCCCCceeeeeeeEeCCeEEEEEe
Q psy8006           8 ISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDL-KA-EILHEVAVLEACRCNSRIVQLHQVFESSHDMILLLE   85 (126)
Q Consensus         8 ~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~-~~-~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~~lv~e   85 (126)
                      -....|++|+||.|+.+..  .+..++.+.+......... .. .+.+|++++.+++++++++.++++    +..+++||
T Consensus         5 ~~~~~l~~~~f~~v~~~~~--~~~k~~~~~l~~~~~~~~~~~~~l~~rE~~iL~~L~~~~~vP~ll~~----~~~~lvme   78 (218)
T PRK12274          5 AVNEPLKSDTFGRILLVRG--GERKFVRRDLSAAPWWLRGVAWWLARREALALRQLDGLPRTPRLLHW----DGRHLDRS   78 (218)
T ss_pred             ccceeecCCCcceEEEeec--CCceeeecccccchhhhhhHHHHHHHHHHHHHHhcCCCCCCCEEEEE----cCEEEEEe
Confidence            3567899999999996654  4666776666544332221 12 378999999999876889988775    34799999


Q ss_pred             ccCcccHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          86 LLTSAVDSKIRESFGSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        86 ~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      |+.+.+|.+....      . ...++.|++.+++++|+.++
T Consensus        79 yI~G~~L~~~~~~------~-~~~~~~qi~~~L~~lH~~GI  112 (218)
T PRK12274         79 YLAGAAMYQRPPR------G-DLAYFRAARRLLQQLHRCGV  112 (218)
T ss_pred             eecCccHHhhhhh------h-hHHHHHHHHHHHHHHHHCcC
Confidence            9999988653321      1 23578899999999999875

>KOG0665|consensus

Probab=99.22  E-value=1.3e-11  Score=79.56  Aligned_cols=115  Identities=15%  Similarity=0.159  Sum_probs=94.4

Q ss_pred             ccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCC------eE
Q psy8006           7 IISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSH------DM   80 (126)
Q Consensus         7 ~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~------~~   80 (126)
                      |+.-..+|.|+- .|..+.+.-.++.+++|.............+..+|..++..+.| +|+++++..+....      ..
T Consensus        19 y~nL~p~~~g~~-~v~~a~D~v~~~~v~ikk~~~pf~n~~~akra~rel~l~~~v~~-~nii~l~n~ftP~~~l~~~~e~   96 (369)
T KOG0665|consen   19 YVNLKPIGSGAQ-IVVAAFDQVLGRPVAIKKLSRPFQNQTHAKRAYRELKLMKCVNH-KNIISLLNVFTPQKTLEEFQEV   96 (369)
T ss_pred             eeeecccCCCCc-eEEecchhhccCceehhhhcCccccCccchhhhhhhhhhhhhcc-cceeeeeeccCccccHHHHHhH
Confidence            445567777877 78888888889999999888775544445578899999999999 99999999997554      47


Q ss_pred             EEEEeccCcccHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          81 ILLLELLTSAVDSKIRESFGSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        81 ~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      |+|||+|+.. |.+.+..  .++-..+.+++.|++.|+.|||..++
T Consensus        97 y~v~e~m~~n-l~~vi~~--elDH~tis~i~yq~~~~ik~lhs~~I  139 (369)
T KOG0665|consen   97 YLVMELMDAN-LCQVILM--ELDHETISYILYQMLCGIKHLHSAGI  139 (369)
T ss_pred             HHHHHhhhhH-HHHHHHH--hcchHHHHHHHHHHHHHHHHHHhcce
Confidence            9999999888 7777663  46778889999999999999999875

>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family

Probab=99.17  E-value=8.5e-10  Score=64.54  Aligned_cols=102  Identities=18%  Similarity=0.160  Sum_probs=81.1

Q ss_pred             eeeccCccceeEEEEEEccCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCC-CCceeeeeeeEeCCeEEEEEeccC
Q psy8006          10 SIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCN-SRIVQLHQVFESSHDMILLLELLT   88 (126)
Q Consensus        10 ~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~-~~iv~l~~~~~~~~~~~lv~e~~~   88 (126)
                      .+.+++|.++.||++....  ..+++|.......    ...+.+|+..+..++++ +++++++.....++..++++|+++
T Consensus         3 ~~~i~~g~~~~v~~~~~~~--~~~~iK~~~~~~~----~~~~~~e~~~~~~l~~~~~~~p~~~~~~~~~~~~~~v~e~~~   76 (155)
T cd05120           3 IKLLKGGLTNRVYLLGTKD--EDYVLKINPSREK----GADREREVAILQLLARKGLPVPKVLASGESDGWSYLLMEWIE   76 (155)
T ss_pred             ceecccccccceEEEEecC--CeEEEEecCCCCc----hhHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCccEEEEEecC
Confidence            3578999999999998754  6789998865432    33688899999999874 588888887777778999999999


Q ss_pred             cccHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhhcc
Q psy8006          89 SAVDSKIRESFGSKSESGVQNCLEPSISVFSSLSKF  124 (126)
Q Consensus        89 ~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~l~~~  124 (126)
                      ++.+..+       +......++.++..+++++|..
T Consensus        77 g~~~~~~-------~~~~~~~~~~~~~~~l~~lh~~  105 (155)
T cd05120          77 GETLDEV-------SEEEKEDIAEQLAELLAKLHQL  105 (155)
T ss_pred             CeecccC-------CHHHHHHHHHHHHHHHHHHhCC
Confidence            8866443       4556677889999999999975

The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves

>cd05119 RIO RIO kinase family, catalytic domain

Probab=99.16  E-value=8.1e-10  Score=67.41  Aligned_cols=109  Identities=15%  Similarity=0.099  Sum_probs=70.2

Q ss_pred             eeeccCccceeEEEEEEccCCcEEEEEEeecCCCCchhHHH----------------------HHHHHHHHHHhcCC-CC
Q psy8006          10 SIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAE----------------------ILHEVAVLEACRCN-SR   66 (126)
Q Consensus        10 ~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~----------------------~~~e~~~l~~~~~~-~~   66 (126)
                      .+.||+|+||.||.+.+. ++..+|+|+++...........                      ...|...+..+.+. ..
T Consensus         2 ~~~lg~G~~g~Vy~a~~~-~~~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~   80 (187)
T cd05119           2 GGPIGTGKEADVYLALDG-DGEPVAVKIYRTGRTSFKKRKRYRTGDYRFGRKKSNWRYLSRLWAEKEFRNLKRLYEAGVP   80 (187)
T ss_pred             CcccccccceeEEEEECC-CCCEEEEEEEecCccchhhhhhhhHHHHHhccCCcchhhhhhHHHHHHHHHHHHHHHcCCC
Confidence            357999999999999876 7899999998865332111111                      13566666666541 12


Q ss_pred             ceeeeeeeEeCCeEEEEEeccCcccHH-HHHHhcCCCCHHHHHHHHHHHHHHHHhhhc-cC
Q psy8006          67 IVQLHQVFESSHDMILLLELLTSAVDS-KIRESFGSKSESGVQNCLEPSISVFSSLSK-FE  125 (126)
Q Consensus        67 iv~l~~~~~~~~~~~lv~e~~~~~~L~-~~~~~~~~~~~~~~~~~~~qi~~~l~~l~~-~~  125 (126)
                      +.+.++.    ...+++|||++++.+. ..+... ... ..+..++.+++.++.++|. .+
T Consensus        81 ~~~~~~~----~~~~lv~e~~~g~~~~~~~l~~~-~~~-~~~~~~~~~~~~~l~~lh~~~~  135 (187)
T cd05119          81 VPKPIDL----NRHVLVMEFIGGDGIPAPRLKDV-RLL-EDPEELYDQILELMRKLYREAG  135 (187)
T ss_pred             CCceEec----CCCEEEEEEeCCCCccChhhhhh-hhc-ccHHHHHHHHHHHHHHHhhccC
Confidence            3333322    2368999999995432 222221 111 6678899999999999998 54

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct

>KOG0195|consensus

Probab=98.93  E-value=2.4e-10  Score=73.02  Aligned_cols=111  Identities=11%  Similarity=0.071  Sum_probs=88.3

Q ss_pred             eccCccceeEEEEEEccCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeEEEEEeccCccc
Q psy8006          12 INDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLLELLTSAV   91 (126)
Q Consensus        12 ~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~~lv~e~~~~~~   91 (126)
                      .|.+...|..|+|+...  ..++.|++............|..|.-.++-.+| |||+.+.+.+.++..+.++..||+.|+
T Consensus       197 kl~e~hsgelwrgrwqg--ndivakil~vr~~t~risrdfneefp~lrifsh-pnilpvlgacnsppnlv~isq~mp~gs  273 (448)
T KOG0195|consen  197 KLAESHSGELWRGRWQG--NDIVAKILNVREVTARISRDFNEEFPALRIFSH-PNILPVLGACNSPPNLVIISQYMPFGS  273 (448)
T ss_pred             hhccCCCcccccccccC--cchhhhhhhhhhcchhhcchhhhhCcceeeecC-CchhhhhhhccCCCCceEeeeeccchH
Confidence            45666777888887753  345667776554444444457777777877888 999999999999999999999999999


Q ss_pred             HHHHHHhc--CCCCHHHHHHHHHHHHHHHHhhhccC
Q psy8006          92 DSKIRESF--GSKSESGVQNCLEPSISVFSSLSKFE  125 (126)
Q Consensus        92 L~~~~~~~--~~~~~~~~~~~~~qi~~~l~~l~~~~  125 (126)
                      |+..+...  ..++..++..++-.++.+++|||.+|
T Consensus       274 lynvlhe~t~vvvd~sqav~faldiargmaflhsle  309 (448)
T KOG0195|consen  274 LYNVLHEQTSVVVDHSQAVRFALDIARGMAFLHSLE  309 (448)
T ss_pred             HHHHHhcCccEEEecchHHHHHHHHHhhHHHHhhcc
Confidence            99998753  35778889999999999999999886

>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed

Probab=98.87  E-value=1.3e-07  Score=60.16  Aligned_cols=109  Identities=8%  Similarity=0.018  Sum_probs=75.1

Q ss_pred             eeecc-CccceeEEEEEEccCCcEEEEEEeecCCC-----------CchhHHHHHHHHHHHHHhcCCCCc--eeeeeeeE
Q psy8006          10 SIIND-MGKYATVRRCRDRKNGTQYAAKFLRKKRR-----------STDLKAEILHEVAVLEACRCNSRI--VQLHQVFE   75 (126)
Q Consensus        10 ~~~lg-~g~~~~v~~~~~~~~~~~~aiK~~~~~~~-----------~~~~~~~~~~e~~~l~~~~~~~~i--v~l~~~~~   75 (126)
                      +..+| .|+.|++|.....  +..+++|.......           .......+.+|+.++..+.+ +++  +...+...
T Consensus        36 ~~~lg~~~g~gtv~~v~~~--~~~~vlk~~~r~~~i~kv~~~~~~~~~~~~~r~~rE~~ll~~L~~-~gi~vP~pl~~~~  112 (239)
T PRK01723         36 ARVVGSAKGRGTTWFVQTP--GVNWVLRHYRRGGLIGKLSKDRYLFTGLERTRAFAEFRLLAQLYE-AGLPVPRPIAARV  112 (239)
T ss_pred             CceeecCCCCccEEEEEeC--CceEEEEEeeEcchHHhhhhhcccccchhhhHHHHHHHHHHHHHh-CCCCCceeEeeee
Confidence            45676 7888889888764  67789988864321           01122357889999999987 664  55555433


Q ss_pred             e-CC---eEEEEEeccCc-ccHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          76 S-SH---DMILLLELLTS-AVDSKIRESFGSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        76 ~-~~---~~~lv~e~~~~-~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      . ..   ..++|+|++++ .+|.+++.. ..+++..    +.|++.++.+||+.++
T Consensus       113 ~~~~~~~~~~lV~e~l~G~~~L~~~l~~-~~l~~~~----~~~i~~~l~~lH~~GI  163 (239)
T PRK01723        113 VRHGLFYRADILIERIEGARDLVALLQE-APLSEEQ----WQAIGQLIARFHDAGV  163 (239)
T ss_pred             eecCcceeeeEEEEecCCCCCHHHHHhc-CCCCHHH----HHHHHHHHHHHHHCCC
Confidence            2 22   23599999997 678888765 3455543    5789999999999875

>cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins

Probab=98.84  E-value=4.8e-08  Score=60.90  Aligned_cols=112  Identities=10%  Similarity=-0.012  Sum_probs=81.4

Q ss_pred             eeeccCccceeEEEEEEccCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCC-CCceeeeeeeEeC---CeEEEEEe
Q psy8006          10 SIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCN-SRIVQLHQVFESS---HDMILLLE   85 (126)
Q Consensus        10 ~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~-~~iv~l~~~~~~~---~~~~lv~e   85 (126)
                      -+.++.|..+.+|++.... |..+++|........ .....+.+|..++..+.+. ..+++++......   +..+++||
T Consensus         3 ~~~l~~G~~n~~~~v~~~~-g~~~ilK~~~~~~~~-~~~~~~~~E~~~~~~l~~~~~~vp~~~~~~~~~~~~~~~~~v~e   80 (223)
T cd05154           3 VRQLSGGQSNLTYLLTAGG-GRRLVLRRPPPGALL-PSAHDVAREYRVLRALAGTGVPVPKVLALCEDPSVLGTPFYVME   80 (223)
T ss_pred             ceecCCCccceEEEEEecC-CcceEEEeCCCcccC-cccccHHHHHHHHHHhhCCCCCCCCEEEECCCCCccCCceEEEE
Confidence            3578999999999987743 578999987654321 1233578899999988762 2345555555432   35689999


Q ss_pred             ccCcccHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhhcc
Q psy8006          86 LLTSAVDSKIRESFGSKSESGVQNCLEPSISVFSSLSKF  124 (126)
Q Consensus        86 ~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~l~~~  124 (126)
                      ++++.++...+.. ..+++.+...++.++..++..||+.
T Consensus        81 ~i~G~~l~~~~~~-~~~~~~~~~~i~~~i~~~l~~lH~~  118 (223)
T cd05154          81 RVDGRVLRDRLLR-PELSPEERRALARALADTLAALHSV  118 (223)
T ss_pred             EeCCEecCCCCCC-CCCCHHHHHHHHHHHHHHHHHHhCC
Confidence            9999987654432 3578888889999999999999985

This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain

>KOG1024|consensus

Probab=98.83  E-value=1e-08  Score=68.48  Aligned_cols=118  Identities=10%  Similarity=0.021  Sum_probs=85.7

Q ss_pred             ccceeeccCccceeEEEEEEccC-----CcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeE-eCCeE
Q psy8006           7 IISSIINDMGKYATVRRCRDRKN-----GTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFE-SSHDM   80 (126)
Q Consensus         7 ~~~~~~lg~g~~~~v~~~~~~~~-----~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~-~~~~~   80 (126)
                      +....++.+|.||.||.|..+..     .+.+-+|.+.... ++-....++.|.-.+-.+.| ||+.++.+... ....+
T Consensus       286 v~l~~llqEGtFGri~~gI~~eEdt~n~~q~v~vKTvk~~A-S~iQv~~~L~es~lly~~sH-~nll~V~~V~ie~~~~P  363 (563)
T KOG1024|consen  286 VRLSCLLQEGTFGRIYRGIWREEDTYNDCQEVLVKTVKQHA-SQIQVNLLLQESMLLYGASH-PNLLSVLGVSIEDYATP  363 (563)
T ss_pred             eechhhhhcCchhheeeeeecccCCcchHHHHHHHHHHhcc-cHHHHHHHHHHHHHHhcCcC-CCccceeEEEeeccCcc
Confidence            34466788999999999965422     1234455554322 11112247778778888887 99999988765 45578


Q ss_pred             EEEEeccCcccHHHHHHh--------cCCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          81 ILLLELLTSAVDSKIRES--------FGSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        81 ~lv~e~~~~~~L~~~~~~--------~~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      ++++.++..|.|..++..        .+.++..+...++.|+..|++|||+.|+
T Consensus       364 ~V~y~~~~~gNLK~FL~~Cr~~~~~~aqtvtt~qlV~masQla~am~hlh~~~V  417 (563)
T KOG1024|consen  364 FVLYPATGVGNLKSFLQICRGDDPSYAQTVTTIQLVLMASQLAMAMEHLHNHGV  417 (563)
T ss_pred             eEEEeccCcchHHHHHHHhccCCCccccchhHHHHHHHHHHHHHHHHHHHhcCc
Confidence            999999999999888861        1257778888999999999999999874

>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed

Probab=98.79  E-value=1e-08  Score=71.66  Aligned_cols=107  Identities=18%  Similarity=0.231  Sum_probs=67.3

Q ss_pred             eeeccCccceeEEEEEEccCCcEEEEEEeecCCCC----------------------------c----hhHHH------H
Q psy8006          10 SIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRS----------------------------T----DLKAE------I   51 (126)
Q Consensus        10 ~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~----------------------------~----~~~~~------~   51 (126)
                      .+.+|+|++|.||.|....+|+.||||++++....                            .    +....      +
T Consensus       124 ~~PlasaSiaQVh~A~l~~~G~~VAVKV~rP~i~~~I~~Dl~~l~~~a~~l~~~~~~~~~l~~~~~v~e~~~~l~~ElD~  203 (537)
T PRK04750        124 IKPLASASIAQVHFARLKDNGREVVVKVLRPDILPVIDADLALMYRLARWVERLLPDGRRLKPREVVAEFEKTLHDELDL  203 (537)
T ss_pred             hhhhcCCCccEEEEEEECCCCCEEEEEEeCcchHHHHHHHHHHHHHHHHHHHHhCcccccCCHHHHHHHHHHHHHHhhCH
Confidence            47899999999999999888999999999875210                            0    00111      3


Q ss_pred             HHHHHHHHHhcC---CCCceeeeeeeEe-CCeEEEEEeccCcccHHHH--HHhcC----CCCHHHHHHHHHHHHH
Q psy8006          52 LHEVAVLEACRC---NSRIVQLHQVFES-SHDMILLLELLTSAVDSKI--RESFG----SKSESGVQNCLEPSIS  116 (126)
Q Consensus        52 ~~e~~~l~~~~~---~~~iv~l~~~~~~-~~~~~lv~e~~~~~~L~~~--~~~~~----~~~~~~~~~~~~qi~~  116 (126)
                      .+|...+.++..   +...+.+...+.+ ....++||||++|+.+.++  +...+    .+.+..+..++.|++.
T Consensus       204 ~~Ea~N~~~~~~~f~~~~~v~VP~v~~d~st~~VLvmE~i~G~~l~d~~~l~~~g~d~~~la~~~v~~~~~Qif~  278 (537)
T PRK04750        204 MREAANASQLRRNFEDSDMLYVPEVYWDYCSETVMVMERMYGIPVSDVAALRAAGTDMKLLAERGVEVFFTQVFR  278 (537)
T ss_pred             HHHHHHHHHHHHHccCCCCeecceeecccCCCceEEEeeecCccHHhHHHHHhcCCCHHHHHHHHHHHHHHHHHh
Confidence            344444444321   1333333333322 3457799999999988664  23323    3666677777788764

>KOG0590|consensus

Probab=98.78  E-value=2.8e-09  Score=75.45  Aligned_cols=116  Identities=13%  Similarity=0.135  Sum_probs=85.9

Q ss_pred             ceeeccCccceeEEEEEEccCCcEEEEEEeecC---CCCchhHH-HHHHHHHHHHHhcCCCCceeeeeeeEeCCeEEEEE
Q psy8006           9 SSIINDMGKYATVRRCRDRKNGTQYAAKFLRKK---RRSTDLKA-EILHEVAVLEACRCNSRIVQLHQVFESSHDMILLL   84 (126)
Q Consensus         9 ~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~---~~~~~~~~-~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~~lv~   84 (126)
                      .+.++|.|++|.++.+.........+.|..+..   ........ .+..|..+-..+.| |+++.....+......+-.|
T Consensus       322 ~~~~~g~ga~g~~~~~~~~~~~~~~~~~~~r~~~~~~~s~~~~~~~i~sE~~i~~~l~h-~~~~e~l~~~~~~~~~~~~m  400 (601)
T KOG0590|consen  322 PGRVLGSGAYGSVRIAKRRSDLKSFPEKEFRVRVKPTESERKYNYNITSEFCIGSSLSH-PNIIETLDIVQEIDGILQSM  400 (601)
T ss_pred             ccceeeecccCceEEEEecCCCccchhhhhhcccCCcccHHHHhhhhhhheeecccccC-CchhhhHHHHhhcccchhhh
Confidence            577899999998888877666665565654421   11111111 25667777778888 99887776666555555559


Q ss_pred             eccCcccHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          85 ELLTSAVDSKIRESFGSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        85 e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      ||+++ +|..++.+...++..++.-++.|++.++.|+|.+|+
T Consensus       401 E~~~~-Dlf~~~~~~~~~~~~e~~c~fKqL~~Gv~y~h~~Gi  441 (601)
T KOG0590|consen  401 EYCPY-DLFSLVMSNGKLTPLEADCFFKQLLRGVKYLHSMGL  441 (601)
T ss_pred             hcccH-HHHHHHhcccccchhhhhHHHHHHHHHHHHHHhcCc
Confidence            99999 899999887678999999999999999999999874

>KOG0603|consensus

Probab=98.69  E-value=4e-09  Score=73.32  Aligned_cols=115  Identities=21%  Similarity=0.217  Sum_probs=94.0

Q ss_pred             eccCccceeEEEEEE---ccCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeEEEEEeccC
Q psy8006          12 INDMGKYATVRRCRD---RKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLLELLT   88 (126)
Q Consensus        12 ~lg~g~~~~v~~~~~---~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~~lv~e~~~   88 (126)
                      ++|+|++|.|+.+..   ...+..+|.|.................|-.++..++.+|.+++++.++.++...++++++..
T Consensus         1 vlg~g~~gkvfLvrk~~g~da~~~yamkvl~k~t~~~~~~~~t~~er~il~~~~~~~f~v~lhyafqt~~kl~l~ld~~r   80 (612)
T KOG0603|consen    1 VLGQGSYGKVFLVRKAGGADAGHLYAMKVLKKATLKVRDRTHTKQERIILAFVHNTPFLVKLHYAFQTDGKLYLILDFLR   80 (612)
T ss_pred             CCCcCCCcchHHHHHhccccccchhhhhcccccccccccccccccHHHHHhhccCCCceeeeeeeeccccchhHhhhhcc
Confidence            478999999986642   34567789998887765444333555666777788755999999999999999999999999


Q ss_pred             cccHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          89 SAVDSKIRESFGSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        89 ~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      ++.+...+.....+.+..+..+...++-+++++|++++
T Consensus        81 gg~lft~l~~~~~f~~~~~~~~~aelaLald~lh~l~i  118 (612)
T KOG0603|consen   81 GGDLFTRLSKEVMFDELDVAFYLAELALALDHLHKLGI  118 (612)
T ss_pred             cchhhhccccCCchHHHHHHHHHHHHHHHHhhcchhHH
Confidence            99888777777789999999999999999999999863

>KOG3741|consensus

Probab=98.50  E-value=2.9e-06  Score=58.92  Aligned_cols=105  Identities=13%  Similarity=0.148  Sum_probs=77.7

Q ss_pred             ceeEEEEEEccCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeE----eCCeEEEEEeccCcc-cH
Q psy8006          18 YATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFE----SSHDMILLLELLTSA-VD   92 (126)
Q Consensus        18 ~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~----~~~~~~lv~e~~~~~-~L   92 (126)
                      ....|++....+|..|++|.+.......  ......-++..+++.| +|+|++.+++.    .+..+.+|++|.+.. +|
T Consensus       289 ~~Ttyk~~s~~DG~~YvLkRlhg~r~~~--~nk~t~lve~wkkl~h-~NvV~frevf~t~tF~D~SlvlvYDYyP~s~TL  365 (655)
T KOG3741|consen  289 SITTYKATSNVDGNAYVLKRLHGDRDQS--TNKDTSLVEAWKKLCH-TNVVPFREVFLTYTFGDLSLVLVYDYYPSSPTL  365 (655)
T ss_pred             cceeEeeeeccCCceeeeeeeccccccC--cccchHHHHHHHHhcc-CceeehhhhhhhhccCcceEEEEEecCCCCchH
Confidence            3457899999999999999994332211  1123344677889998 99999999886    344789999998863 56


Q ss_pred             HHHH-H--------------hcCCCCHHHHHHHHHHHHHHHHhhhccC
Q psy8006          93 SKIR-E--------------SFGSKSESGVQNCLEPSISVFSSLSKFE  125 (126)
Q Consensus        93 ~~~~-~--------------~~~~~~~~~~~~~~~qi~~~l~~l~~~~  125 (126)
                      .++. .              .+...+|..++.++.|+..||.++|+-|
T Consensus       366 ~d~~F~~~~~t~~~n~~~~~~~~~~~e~~lW~y~~QLtaaL~sIHssG  413 (655)
T KOG3741|consen  366 YDLYFANPPFTKRTNSFYPSQNLKAPEEVLWSYISQLTAALYSIHSSG  413 (655)
T ss_pred             HHHHccCCccccccccccccCCCCchHHHHHHHHHHHHHHHHHHHhcC
Confidence            5432 1              1225788999999999999999999876

>cd05151 ChoK Choline Kinase (ChoK)

Probab=98.48  E-value=1.8e-06  Score=51.76  Aligned_cols=101  Identities=11%  Similarity=-0.046  Sum_probs=67.5

Q ss_pred             eeeccCccceeEEEEEEccCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeEEEEEeccCc
Q psy8006          10 SIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLLELLTS   89 (126)
Q Consensus        10 ~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~~lv~e~~~~   89 (126)
                      .+.++.|.++.+|++...  +..+++|........   .....+|..++..+.+...+++++...  ....++|||++++
T Consensus         3 ~~~l~~G~~~~vy~~~~~--~~~~~lK~~~~~~~~---~~~~~~E~~~l~~l~~~~~~P~~~~~~--~~~~~lv~e~i~G   75 (170)
T cd05151           3 ISPLKGGMTNKNYRVEVA--NKKYVVRIPGNGTEL---LINRENEAENSKLAAEAGIGPKLYYFD--PETGVLITEFIEG   75 (170)
T ss_pred             eeecCCcccCceEEEEEC--CeEEEEEeCCCCccc---ccCHHHHHHHHHHHHHhCCCCceEEEe--CCCCeEEEEecCC
Confidence            457889999999998764  678999987654311   123567888888876522233444433  2335799999999


Q ss_pred             ccHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhhccC
Q psy8006          90 AVDSKIRESFGSKSESGVQNCLEPSISVFSSLSKFE  125 (126)
Q Consensus        90 ~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~l~~~~  125 (126)
                      .++...     ...   ....+.+++.+++.||..+
T Consensus        76 ~~l~~~-----~~~---~~~~~~~l~~~l~~LH~~~  103 (170)
T cd05151          76 SELLTE-----DFS---DPENLEKIAKLLKKLHSSP  103 (170)
T ss_pred             Cccccc-----ccc---CHHHHHHHHHHHHHHhCCC
Confidence            876432     111   1345678999999999865

The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph

>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase

Probab=98.41  E-value=3.1e-06  Score=58.35  Aligned_cols=33  Identities=27%  Similarity=0.256  Sum_probs=28.2

Q ss_pred             cceeeccCccceeEEEEEEccCCcEEEEEEeecC
Q psy8006           8 ISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKK   41 (126)
Q Consensus         8 ~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~   41 (126)
                      ...+.+|+|++|.||+|... +|+.||||+.++.
T Consensus       120 fd~~plasaSigQVh~A~l~-~G~~VaVKv~rp~  152 (437)
T TIGR01982       120 FEEKPLAAASIAQVHRARLV-DGKEVAVKVLRPG  152 (437)
T ss_pred             CCCcceeeeehhheEEEEec-CCCEEEEEeeCCC
Confidence            34678999999999999864 6899999999765

This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.

>cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain

Probab=98.41  E-value=1.2e-05  Score=49.76  Aligned_cols=110  Identities=11%  Similarity=0.113  Sum_probs=72.9

Q ss_pred             eeccCccceeEEEEEEcc------CCcEEEEEEeecCCCC----------c----------h----hHHHHHHHHHHHHH
Q psy8006          11 IINDMGKYATVRRCRDRK------NGTQYAAKFLRKKRRS----------T----------D----LKAEILHEVAVLEA   60 (126)
Q Consensus        11 ~~lg~g~~~~v~~~~~~~------~~~~~aiK~~~~~~~~----------~----------~----~~~~~~~e~~~l~~   60 (126)
                      ..||.|.-+.||.|....      .+..+|+|+.+-....          +          .    ...+..+|...|.+
T Consensus         3 g~i~~GKEa~V~~~~~~~~~~~~~~~~~~avKi~r~~~~~Fk~~~~y~~~~~rf~~~~~k~~~~~~~~~wa~kE~r~L~r   82 (197)
T cd05146           3 GCISTGKESVVLHANGGSNETEQVIPTECAIKVFKTTLNEFKNRDKYIKDDYRFKDRFSKLNPRKIIRMWAEKEMHNLKR   82 (197)
T ss_pred             CccccCcceEEEEEecCcccccccCCceEEEEEEeccceeEcChhhhccCCcccccCcCCCCHHHHHHHHHHHHHHHHHH
Confidence            468999999999997653      3578999977653210          0          0    01123489999998


Q ss_pred             hcCC-CCceeeeeeeEeCCeEEEEEeccCcccHH-HHHHhcCCCCHHHHHHHHHHHHHHHHhh-hccC
Q psy8006          61 CRCN-SRIVQLHQVFESSHDMILLLELLTSAVDS-KIRESFGSKSESGVQNCLEPSISVFSSL-SKFE  125 (126)
Q Consensus        61 ~~~~-~~iv~l~~~~~~~~~~~lv~e~~~~~~L~-~~~~~~~~~~~~~~~~~~~qi~~~l~~l-~~~~  125 (126)
                      +... -+++..+..    ..-++||||++++.+. ..+++ ..+++.+...+..|++.++..+ |+.+
T Consensus        83 l~~~Gv~vP~pi~~----~~~~lvME~Ig~~~~~~~~Lkd-~~~~~~~~~~i~~~i~~~l~~l~H~~g  145 (197)
T cd05146          83 MQKAGIPCPEVVVL----KKHVLVMSFIGDDQVPAPKLKD-AKLNDEEMKNAYYQVLSMMKQLYKECN  145 (197)
T ss_pred             HHHcCCCCCeEEEe----cCCEEEEEEcCCCCccchhhhc-cccCHHHHHHHHHHHHHHHHHHHHhCC
Confidence            8651 344444432    4577899999876442 23332 3456666778889999999988 7765

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown.

>KOG1243|consensus

Probab=98.17  E-value=2.1e-05  Score=56.04  Aligned_cols=93  Identities=13%  Similarity=0.129  Sum_probs=72.3

Q ss_pred             EEEEccCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeEEEEEeccCcccHHHHHHhcCCC
Q psy8006          23 RCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLLELLTSAVDSKIRESFGSK  102 (126)
Q Consensus        23 ~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~  102 (126)
                      .|..+.++.++.+.....+.-  .......+.+.-++.++| |+|+++++.++..+.+|||.|-+..  |...+++   +
T Consensus        30 ~~t~k~~~~~vsVF~~~~~~~--~~~~~~~~A~k~lKtlRH-P~Il~yL~t~e~~~~~ylvTErV~P--l~~~lk~---l  101 (690)
T KOG1243|consen   30 DGTRKADGGPVSVFVYKRSNG--EVTELAKRAVKRLKTLRH-PNILSYLDTTEEEGTLYLVTERVRP--LETVLKE---L  101 (690)
T ss_pred             ccceeccCCceEEEEEeCCCc--hhhHHHHHHHHHhhhccC-chhhhhhhhhcccCceEEEeecccc--HHHHHHH---h
Confidence            355667788888888776543  223346778889999999 9999999999999999999997644  4556665   3


Q ss_pred             CHHHHHHHHHHHHHHHHhhhc
Q psy8006         103 SESGVQNCLEPSISVFSSLSK  123 (126)
Q Consensus       103 ~~~~~~~~~~qi~~~l~~l~~  123 (126)
                      +...+..-++||+.||.|||+
T Consensus       102 ~~~~v~~Gl~qIl~AL~FL~~  122 (690)
T KOG1243|consen  102 GKEEVCLGLFQILAALSFLND  122 (690)
T ss_pred             HHHHHHHHHHHHHHHHHHHhc
Confidence            466677888999999999985

>PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A

Probab=97.97  E-value=0.00027  Score=46.27  Aligned_cols=121  Identities=12%  Similarity=0.167  Sum_probs=70.8

Q ss_pred             ccccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCc-hhHHHHHHHHHHHHHhcC---------CCCceeeeeee
Q psy8006           5 KNIISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRST-DLKAEILHEVAVLEACRC---------NSRIVQLHQVF   74 (126)
Q Consensus         5 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~-~~~~~~~~e~~~l~~~~~---------~~~iv~l~~~~   74 (126)
                      .++..+..||.|+++.||.+.+..++..+|+|......... .....+.+|.-....+.+         +-.++-.++..
T Consensus        12 r~l~~~~~i~~g~~~~v~~v~d~~t~~~~avkvf~~~~~~~~~~~~~~~~e~l~~~~~~~~~~p~~a~~~~r~l~P~d~~   91 (288)
T PF14531_consen   12 RTLVRGRIIGKGGFSIVFEVTDVETGEEFAVKVFLLPADASANEYEQLKEEQLAITLFPGVKNPKEAYRHLRFLVPLDLL   91 (288)
T ss_dssp             EEEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEEESSTTHTTHHHHHHHHHHGGGGSTT--SHHHHHHHH-B---SEEE
T ss_pred             eEEEEccccccCCceEEEEEEEccCCceEEEEEEecccccchHHHHHHHHHHHHhhhhccCCCHHHHHHhceEEeeeEEE
Confidence            35677899999999999999999999999999888655322 234456666543333111         11222222222


Q ss_pred             E---------eCC--------eEEEEEeccCcccHHHHHH---hcCCC--C-HHHH-HHHHHHHHHHHHhhhccCC
Q psy8006          75 E---------SSH--------DMILLLELLTSAVDSKIRE---SFGSK--S-ESGV-QNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        75 ~---------~~~--------~~~lv~e~~~~~~L~~~~~---~~~~~--~-~~~~-~~~~~qi~~~l~~l~~~~~  126 (126)
                      .         ...        ..+++|+-+.++ |.+++.   .....  . ...+ ..+..|++..+++||..|+
T Consensus        92 ~i~~~~~~~~~~~~~~~~~v~n~~~l~P~~~~d-L~~~~~~l~~~~~~~~~l~~~arl~lT~Q~I~lvA~Lh~~Gl  166 (288)
T PF14531_consen   92 RIPGKPPFFERGPGQSIYWVLNRFLLMPRAQGD-LQDLVEALFSRAQTHSPLAFAARLSLTVQMIRLVANLHSYGL  166 (288)
T ss_dssp             EETTS-SEEEECETTEEEEEESEEEEEE--SEE-HHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred             EEcCCCcceecCCCCccceeehhhhccchhhhc-HHHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHHhhcce
Confidence            1         111        136678877555 766643   22222  1 1223 2444799999999999873

>PLN00181 protein SPA1-RELATED; Provisional

Probab=97.91  E-value=5.2e-06  Score=61.12  Aligned_cols=48  Identities=6%  Similarity=-0.029  Sum_probs=39.7

Q ss_pred             CeEEEEEeccCcccHHHHHHh-cCCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          78 HDMILLLELLTSAVDSKIRES-FGSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        78 ~~~~lv~e~~~~~~L~~~~~~-~~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      ..++.++|+++. +|.+++.. ...+++..+..++.||+.|++|||+.+|
T Consensus        53 ~~~~~~~e~~~~-~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~gI  101 (793)
T PLN00181         53 DSIVRALECEDV-SLRQWLDNPDRSVDAFECFHVFRQIVEIVNAAHSQGI  101 (793)
T ss_pred             chhhhhhccCCc-cHHHHHhcccccccHHHHHHHHHHHHHHHHHHHhCCe
Confidence            356777887755 59999865 3569999999999999999999999875

>PF01636 APH: Phosphotransferase enzyme family This family is part of the larger protein kinase superfamily

Probab=97.90  E-value=0.00089  Score=41.88  Aligned_cols=102  Identities=19%  Similarity=0.114  Sum_probs=73.8

Q ss_pred             eeccCccceeEEEEEEccCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCC-CCceeeeeee---EeCCeEEEEEec
Q psy8006          11 IINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCN-SRIVQLHQVF---ESSHDMILLLEL   86 (126)
Q Consensus        11 ~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~-~~iv~l~~~~---~~~~~~~lv~e~   86 (126)
                      +.++.|..+.+|......  ..+++|.....    .....+.+|..++..+..+ ..+++++...   ......+++|++
T Consensus         3 ~~l~~G~~n~~~~v~~~~--~~~vlK~~~~~----~~~~~~~~e~~~~~~l~~~~~pvP~~~~~~~~~~~~~~~~~~~~~   76 (239)
T PF01636_consen    3 RPLSGGFSNRVYRVTTDD--GRYVLKFYRPP----DAAERLRREAAVLRQLAEHGIPVPRVLAFDTSDEFNGFPYLLMEY   76 (239)
T ss_dssp             EEEEESSSSEEEEEEETT--SEEEEEEESSH----HHHHHHHHHHHHHHHHHHTTSBS--EEEEEEETEETSEEEEEEEE
T ss_pred             ccCCCCCeeeEEEEEECC--cEEEEEEeCCC----CCHHHHHHHHHHHHHHHhcCCCCceEEeecccccccccceEEEEE
Confidence            568889999999998765  47899986543    2234677888888888652 2244555432   233467999999


Q ss_pred             cCcccHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhhcc
Q psy8006          87 LTSAVDSKIRESFGSKSESGVQNCLEPSISVFSSLSKF  124 (126)
Q Consensus        87 ~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~l~~~  124 (126)
                      +++..+..      ..+......++.++...+..||+.
T Consensus        77 i~g~~~~~------~~~~~~~~~~~~~~~~~l~~lh~~  108 (239)
T PF01636_consen   77 IPGRPLDD------ELSPEQRPELLRQLGRALAQLHQV  108 (239)
T ss_dssp             ESSEEHHH------TSTHHHHHHHHHHHHHHHHHHHHS
T ss_pred             eccccccc------cccccccccccccchhhhhhcccc
Confidence            99998866      467777888899999999999975

; InterPro: IPR002575 This entry consists of bacterial antibiotic resistance proteins, which confer resistance to various aminoglycosides they include:- aminoglycoside 3'-phosphotransferase or kanamycin kinase / neomycin-kanamycin phosphotransferase and streptomycin 3''-kinase or streptomycin 3''-phosphotransferase. The aminoglycoside phosphotransferases inactivate aminoglycoside antibiotics via phosphorylation []. The proteins are found in a range of taxonomic groups.; PDB: 2PPQ_A 2Q83_B 3TDV_B 3TDW_A 3I0O_A 3I0Q_A 3I1A_B 3Q2M_A 3HAV_C 2PUI_B ....

>PLN02876 acyl-CoA dehydrogenase

Probab=97.85  E-value=0.00045  Score=51.47  Aligned_cols=114  Identities=10%  Similarity=0.070  Sum_probs=74.9

Q ss_pred             ceeeccCccceeEEEEEEccCC--cEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCC--ceeeeeeeEeC---CeEE
Q psy8006           9 SSIINDMGKYATVRRCRDRKNG--TQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSR--IVQLHQVFESS---HDMI   81 (126)
Q Consensus         9 ~~~~lg~g~~~~v~~~~~~~~~--~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~--iv~l~~~~~~~---~~~~   81 (126)
                      ..+.++.|.+..+|.......+  ..+++|......... ....+.+|..++..+..+++  +++++..+.++   +..|
T Consensus        42 ~v~~l~gG~sn~ty~l~~~~~~~~~~~VLR~~p~~~~~~-~~~~~~rE~~~l~~L~~~~~vpVP~v~~~~~d~~v~G~~f  120 (822)
T PLN02876         42 KVSQFGHGQSNPTFLLEVGNGGSVKRYVLRKKPPGKLLQ-SAHAVEREYQVLRALGEHTDVPVPKVYCLCTDASVIGTAF  120 (822)
T ss_pred             eEEEeCCCCcCceEEEEECCCCcceeEEEEeCCCCccCc-cHHHHHHHHHHHHHHhhcCCCCCCcEEEEecCCCcCCCce
Confidence            4566788888888877654322  356777665432211 12357899999999862244  36666665543   4688


Q ss_pred             EEEeccCcccHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhhccC
Q psy8006          82 LLLELLTSAVDSKIRESFGSKSESGVQNCLEPSISVFSSLSKFE  125 (126)
Q Consensus        82 lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~l~~~~  125 (126)
                      +|||++++..+.+-  .-..+++.+...+..+++.++..||...
T Consensus       121 lVME~v~G~~~~~~--~~~~~~~~~r~~l~~~l~~~La~LH~vd  162 (822)
T PLN02876        121 YIMEYLEGRIFVDP--KLPGVAPERRRAIYRATAKVLAALHSAD  162 (822)
T ss_pred             EEEEecCCcccCCc--cCCCCCHHHHHHHHHHHHHHHHHHhCCC
Confidence            99999998754321  0113566777789999999999999853

>PRK10593 hypothetical protein; Provisional

Probab=97.72  E-value=0.0017  Score=42.79  Aligned_cols=107  Identities=13%  Similarity=0.081  Sum_probs=72.1

Q ss_pred             ccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCC--CCceeeeeeeEe---CCeEE
Q psy8006           7 IISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCN--SRIVQLHQVFES---SHDMI   81 (126)
Q Consensus         7 ~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~--~~iv~l~~~~~~---~~~~~   81 (126)
                      +...+.||.|..+.||...... + .+.+|..+ ....   ...+.+|...++.+...  ..++++++.+..   .+..+
T Consensus        16 ~~~~~~i~~G~~~~vy~~~~~~-~-~~~~k~~~-~~~~---~~~~~~Ea~~L~~L~~~~~vpVP~V~~~~~~~~~~g~~~   89 (297)
T PRK10593         16 LSRVECISEQPYAALWALYDSQ-G-NPMPLMAR-SFST---PGVAQQEAWKLSMLARSGTVRMPTVYGVMTHEQSPGPDV   89 (297)
T ss_pred             hheeeecCCccceeEEEEEcCC-C-CEEEEEec-cccc---chHHHHHHHHHHHHccCCCCCcCcEEEEeccCCcCCCeE
Confidence            4456689999999999875432 3 35667643 2111   22588899888888652  356677766543   36689


Q ss_pred             EEEeccCcccHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhhcc
Q psy8006          82 LLLELLTSAVDSKIRESFGSKSESGVQNCLEPSISVFSSLSKF  124 (126)
Q Consensus        82 lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~l~~~  124 (126)
                      +|||++++.++.+.     ..+......+..++..+++.||+.
T Consensus        90 LVmE~i~G~~~~~~-----~~~~~~~~~l~~~l~~~La~LH~~  127 (297)
T PRK10593         90 LLLERLRGVSVEAP-----ARTPERWEQLKDQIVEGLLAWHRI  127 (297)
T ss_pred             EEEeccCCEecCCC-----CCCHHHHHHHHHHHHHHHHHHhCC
Confidence            99999999877541     123444566777888999999974

>KOG1240|consensus

Probab=97.71  E-value=1.1e-05  Score=60.42  Aligned_cols=115  Identities=11%  Similarity=0.059  Sum_probs=84.9

Q ss_pred             ccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCC--chhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeEEEEE
Q psy8006           7 IISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRS--TDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLL   84 (126)
Q Consensus         7 ~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~--~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~~lv~   84 (126)
                      +.-.+.||++-|-+|.+|++.. |. +++|++-+....  -....+-..|+. ..-.++ ||++++-.....+.-.|+|-
T Consensus        25 ~~~~~~LGstRFlKv~r~k~~e-G~-vVvKVFvk~~p~~sL~~~~qrL~~ik-~~l~~~-pn~lPfqk~~~t~kAAylvR  100 (1431)
T KOG1240|consen   25 CHYVENLGSTRFLKVARAKDRE-GL-VVVKVFVKQDPTISLRPFKQRLEEIK-FALMKA-PNCLPFQKVLVTDKAAYLVR  100 (1431)
T ss_pred             eeeecccCchhhhhhhhccCCC-ce-EEEEEEeccCCCCCchHHHHHHHHHH-HHhhcC-CcccchHHHHHhhHHHHHHH
Confidence            4456789999999999998854 44 899988765422  122233344444 333455 99998877766666778888


Q ss_pred             eccCcccHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          85 ELLTSAVDSKIRESFGSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        85 e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      +|.... |++.+..++-+..-+-..++.|++.|+..-|+.++
T Consensus       101 qyvkhn-LyDRlSTRPFL~~iEKkWiaFQLL~al~qcH~~gV  141 (1431)
T KOG1240|consen  101 QYVKHN-LYDRLSTRPFLVLIEKKWIAFQLLKALSQCHKLGV  141 (1431)
T ss_pred             HHHhhh-hhhhhccchHHHHHHHHHHHHHHHHHHHHHHHcCc
Confidence            888777 88888876667777888999999999999999875

>KOG0601|consensus

Probab=97.70  E-value=5.1e-05  Score=53.08  Aligned_cols=118  Identities=14%  Similarity=0.015  Sum_probs=86.7

Q ss_pred             cceeeccCccceeEEEEEEc-cCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeEEEEEec
Q psy8006           8 ISSIINDMGKYATVRRCRDR-KNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLLEL   86 (126)
Q Consensus         8 ~~~~~lg~g~~~~v~~~~~~-~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~~lv~e~   86 (126)
                      -....+|.|.|+.++....+ ..+..|++|..............-+.|+-+...+..|.+++..+..+......|+--||
T Consensus       268 ~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~l~~~~~di~sl~ev~l~~~l~~~~~~~g~~~~W~~~r~~~ip~e~  347 (524)
T KOG0601|consen  268 GLVSKISDGNFSSVFKVSKRPEGDCIYAAKELLNGLATFASDIFSLGEVILEAILGSHLPSVGKNSSWSQLRQGYIPLEF  347 (524)
T ss_pred             ceeEEccCCccccceeeeecCCCCceEeChhhhccccchHhhhcchhhhhHhhHhhcccccCCCCCCccccccccCchhh
Confidence            34567889999998877654 66778999988765543322223456666666666558888888887777777899999


Q ss_pred             cCcccHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhhccC
Q psy8006          87 LTSAVDSKIRESFGSKSESGVQNCLEPSISVFSSLSKFE  125 (126)
Q Consensus        87 ~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~l~~~~  125 (126)
                      +++++..........+.+...+.+..|++.++.++|+++
T Consensus       348 ~~~~s~~l~~~~~~~~d~~~~~~~~~q~~~~l~~i~s~~  386 (524)
T KOG0601|consen  348 CEGGSSSLRSVTSQMLDEDPRLRLTAQILTALNVIHSKL  386 (524)
T ss_pred             hcCcchhhhhHHHHhcCcchhhhhHHHHHhccccccchh
Confidence            999876544433346788888999999999999999875

>KOG0590|consensus

Probab=97.68  E-value=4.8e-06  Score=59.48  Aligned_cols=118  Identities=16%  Similarity=0.064  Sum_probs=87.6

Q ss_pred             ccccceeeccCccceeEEEEEEc-cCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeEEEE
Q psy8006           5 KNIISSIINDMGKYATVRRCRDR-KNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILL   83 (126)
Q Consensus         5 ~~~~~~~~lg~g~~~~v~~~~~~-~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~~lv   83 (126)
                      ..|...+.+|+|+++.+-..... .....+|.|.+...............|..+-..+..|+|++..++....+.+.+++
T Consensus        20 ~~~~~~~~ig~gs~~~~~~~~~~~~~~~~~a~~~~s~~~~~~~~~~~i~~e~~~~~~~s~h~n~~~~~~~~~~~~~~~~~   99 (601)
T KOG0590|consen   20 SQYKLSRSIGKGSFSSSALASNSRDPESSSATKPISIPPKSEDSSEHIDTETDIQKKLSKHSNTVHMIEPSSSPRSYLLS   99 (601)
T ss_pred             ccccccccccccccchhhhhhhcCCCcceeeccCCCCCCCccchhhhcCccccccccccccccccccCCccCCCcccccc
Confidence            34556677899999999877663 33445667766655422222223445666666666239999999999999999999


Q ss_pred             EeccCcccHHHHH-HhcC-CCCHHHHHHHHHHHHHHHHhhh
Q psy8006          84 LELLTSAVDSKIR-ESFG-SKSESGVQNCLEPSISVFSSLS  122 (126)
Q Consensus        84 ~e~~~~~~L~~~~-~~~~-~~~~~~~~~~~~qi~~~l~~l~  122 (126)
                      +++.+++++...+ .... ..+...+..++.|+..++.|+|
T Consensus       100 ~~~s~g~~~f~~i~~~~~~~~~~~~~~~~~~ql~s~l~~~H  140 (601)
T KOG0590|consen  100 LSYSDGGSLFSKISHPDSTGTSSSSASRYLPQLNSGLSYLH  140 (601)
T ss_pred             cCcccccccccccccCCccCCCCcchhhhhhhhccCccccC
Confidence            9999999988777 5444 6778888999999999999999

>KOG3087|consensus

Probab=97.67  E-value=0.0024  Score=39.44  Aligned_cols=114  Identities=19%  Similarity=0.148  Sum_probs=75.0

Q ss_pred             ceeeccCccceeEEEEEEccCCcEEEEEEeecCCC-----Cchh-HHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeEEE
Q psy8006           9 SSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRR-----STDL-KAEILHEVAVLEACRCNSRIVQLHQVFESSHDMIL   82 (126)
Q Consensus         9 ~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~-----~~~~-~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~~l   82 (126)
                      ...++-+|+-+.|+.+..  .|+.+.||.=.+...     +... .++..+|..++.++.. -.|.-.-=++.+...-.|
T Consensus        11 ~l~likQGAEArv~~~~~--~Ge~~iIK~Rf~K~YRHP~LD~kLtr~Rt~~Ear~l~k~~~-~GI~~P~l~~~D~~~~~i   87 (229)
T KOG3087|consen   11 SLELIKQGAEARVPRGSF--SGEAAIIKERFSKRYRHPALDQKLTRKRTKQEARLLAKCRA-LGIPAPRLIFIDTYGGQI   87 (229)
T ss_pred             cceeeeccceeeEeeecc--CCceeEEeecccccccchHHHHHHHHHHHHHHHHHHHHHHH-hCCCCceEEEEecCCCeE
Confidence            356788999999998875  466677775444332     2222 3458899999999875 444433333445555678


Q ss_pred             EEeccCcc-cHHHHHHhcC-CCCHHH-HHHHHHHHHHHHHhhhccC
Q psy8006          83 LLELLTSA-VDSKIRESFG-SKSESG-VQNCLEPSISVFSSLSKFE  125 (126)
Q Consensus        83 v~e~~~~~-~L~~~~~~~~-~~~~~~-~~~~~~qi~~~l~~l~~~~  125 (126)
                      .|||.++. ++.+++.... .-.++. ...+++++=+.+.-||+-+
T Consensus        88 ~ME~~~g~~~vk~~i~~~~~~~~~d~~~~~~~~~iG~~igklH~nd  133 (229)
T KOG3087|consen   88 YMEFIDGASTVKDFILSTMEDESEDEGLAELARRIGELIGKLHDND  133 (229)
T ss_pred             EEEeccchhHHHHHHHHHccCcccchhHHHHHHHHHHHHHHhhhCC
Confidence            89999983 4666665422 222222 3789999999999999765

>TIGR02172 Fb_sc_TIGR02172 Fibrobacter succinogenes paralogous family TIGR02172

Probab=97.66  E-value=0.0023  Score=40.52  Aligned_cols=102  Identities=13%  Similarity=0.041  Sum_probs=68.2

Q ss_pred             eeccCccceeEEEEEEccCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCC-CCceeeeeeeEeCCeEEEEEeccCc
Q psy8006          11 IINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCN-SRIVQLHQVFESSHDMILLLELLTS   89 (126)
Q Consensus        11 ~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~-~~iv~l~~~~~~~~~~~lv~e~~~~   89 (126)
                      ..+++|..+.||+.    .+..+++|......    ......+|..++..+... -.+++.+.....++...++||+++|
T Consensus         7 ~~i~~G~t~~~y~~----~~~~~VlR~~~~~~----~~~~i~~E~~~l~~l~~~glpvP~~~~~~~~~~~~glv~e~i~G   78 (226)
T TIGR02172         7 TQTGEGGNGESYTH----KTGKWMLKLYNPGF----DKETIKREFDASRKVFSLGIPTPHPFDLVEDGGRLGLIYELIVG   78 (226)
T ss_pred             eeecCCCCcceeEe----cCCCEEEEeCCCCC----CHHHHHHHHHHHHHHHHcCCCCCceEEEEecCCeeeeeeeecCC
Confidence            57899999999974    24456788776432    123468899888888641 2345666676667778899999999


Q ss_pred             cc-HHHHHHhcCCCCHHHHHHHHHHHHHHHHhhhcc
Q psy8006          90 AV-DSKIRESFGSKSESGVQNCLEPSISVFSSLSKF  124 (126)
Q Consensus        90 ~~-L~~~~~~~~~~~~~~~~~~~~qi~~~l~~l~~~  124 (126)
                      .+ +.....    .+......+..+++..+.-||..
T Consensus        79 ~~~~~~~~~----~~~~~~~~l~~~la~~l~~lH~~  110 (226)
T TIGR02172        79 KRSFSRIIS----DNPSRLEEIAKIFAEMAKKLHST  110 (226)
T ss_pred             ccchhhhhc----CCHHHHHHHHHHHHHHHHHHhCC
Confidence            63 333322    23344456777788888888864

This model describes a paralogous family of five proteins, likely to be enzymes, in the rumen bacterium Fibrobacter succinogenes S85. Members show homology to proteins described by PFAM model pfam01636, a phosphotransferase enzyme family associated with resistance to aminoglycoside antibiotics. However, members of this family score below the current trusted and noise cutoffs for pfam01636.

>KOG1023|consensus

Probab=97.65  E-value=0.00012  Score=51.06  Aligned_cols=65  Identities=8%  Similarity=-0.058  Sum_probs=57.0

Q ss_pred             HHhcCCCCceeeeeeeEeCCeEEEEEeccCcccHHHHHHh-cCCCCHHHHHHHHHHHHHHHHhhhcc
Q psy8006          59 EACRCNSRIVQLHQVFESSHDMILLLELLTSAVDSKIRES-FGSKSESGVQNCLEPSISVFSSLSKF  124 (126)
Q Consensus        59 ~~~~~~~~iv~l~~~~~~~~~~~lv~e~~~~~~L~~~~~~-~~~~~~~~~~~~~~qi~~~l~~l~~~  124 (126)
                      +.+.| .|+.++.+.+..++..+++.+||..|+|.+.+.. ...++..-...+++.++.+++|||.-
T Consensus         2 ~~l~h-~n~~~f~g~~~~~~~~~~i~~~c~rGsl~D~i~~~~~~~d~~F~~s~~rdi~~Gl~ylh~s   67 (484)
T KOG1023|consen    2 RQLDH-DNLNKFIGASVDGPEMIVIWEYCSRGSLLDILSNEDIKLDYFFILSFIRDISKGLAYLHNS   67 (484)
T ss_pred             cccch-hhhhhheeeEecCCceEEEEeeecCccHHhHHhccccCccHHHHHHHHHHHHHHHHHHhcC
Confidence            45667 9999999999999999999999999999999876 45677777888999999999999974

>KOG0601|consensus

Probab=97.63  E-value=5.7e-05  Score=52.82  Aligned_cols=116  Identities=16%  Similarity=0.039  Sum_probs=89.8

Q ss_pred             cceeeccC--ccceeEEEEEE--ccCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeEEEE
Q psy8006           8 ISSIINDM--GKYATVRRCRD--RKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILL   83 (126)
Q Consensus         8 ~~~~~lg~--g~~~~v~~~~~--~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~~lv   83 (126)
                      .....+|.  |.+|.+|.+..  ..++..+|+|.-............-.+|+...++++.|++.++.+..+...+..|+-
T Consensus       117 ~~~~~~g~~~g~~~s~~~~~~~~~~s~~~~a~k~s~~p~s~p~~~~~k~~~~~s~~~i~~~~~~v~~~~~~e~~~~lfiq  196 (524)
T KOG0601|consen  117 PISSRTGSLPGSKGSVFKSRCTNSESPHKFAVKKSKIPFSPPLDSKRKLREFLSHHKIDSHENPVRDSPAWEGSGILFIQ  196 (524)
T ss_pred             ccccccccCCCCCceeecccCCcccCCcccccccccCCCCCccccccccchhhcccccCccccccccCcccccCCcceee
Confidence            34567888  99999998877  777888898875544333333334567777788887779999989999999999999


Q ss_pred             EeccCcccHHHHHHhcC-CCCHHHHHHHHHHHHH----HHHhhhcc
Q psy8006          84 LELLTSAVDSKIRESFG-SKSESGVQNCLEPSIS----VFSSLSKF  124 (126)
Q Consensus        84 ~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~qi~~----~l~~l~~~  124 (126)
                      .|++... +..+..... .++...++..+.+..+    |+.++|.-
T Consensus       197 tE~~~~s-l~~~~~~~~~~~p~~~l~~~~~~~~~~~~~al~~~hs~  241 (524)
T KOG0601|consen  197 TELCGES-LQSYCHTPCNFLPDNLLWNSLRDWLSRDVTALSHLHSN  241 (524)
T ss_pred             eccccch-hHHhhhcccccCCchhhhhHHhhhhhcccccccccCCC
Confidence            9988744 777766544 4888899999999999    99999864

>COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms]

Probab=97.60  E-value=0.0028  Score=39.00  Aligned_cols=106  Identities=14%  Similarity=0.051  Sum_probs=69.9

Q ss_pred             eeccCccceeEEEEEEccCCcEEEEEEeecCCC-----CchhH-HHHHHHHHHHHHhcCCCCceeeeeeeEeCCeEEEEE
Q psy8006          11 IINDMGKYATVRRCRDRKNGTQYAAKFLRKKRR-----STDLK-AEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLL   84 (126)
Q Consensus        11 ~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~-----~~~~~-~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~~lv~   84 (126)
                      ..+.+|+-+.++.+..  .+..+.+|.=-+...     +...+ .+..+|..++.++.. ..+....=+..+++.-.|+|
T Consensus         2 ~~i~~GAEa~i~~~~~--~g~~av~K~Ri~K~YR~p~LD~klrr~Rt~~Earil~~a~~-~GV~~P~v~dvD~~~~~I~m   78 (204)
T COG3642           2 DLIKQGAEAIIYLTDF--LGLPAVVKERIPKRYRHPELDEKLRRERTRREARILAKARE-AGVPVPIVYDVDPDNGLIVM   78 (204)
T ss_pred             chhhCCcceeEEeeec--cCcceEEEeecCcccCChHHHHHHHHHHHHHHHHHHHHHHH-cCCCCCeEEEEcCCCCEEEE
Confidence            3578899999988754  344455554333322     22333 347899999999876 45444333344556677999


Q ss_pred             eccCcccHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          85 ELLTSAVDSKIRESFGSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        85 e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      ||.++..|.+.+...       ...+++.+=..+.-||+-++
T Consensus        79 e~I~G~~lkd~l~~~-------~~~~~r~vG~~vg~lH~~gi  113 (204)
T COG3642          79 EYIEGELLKDALEEA-------RPDLLREVGRLVGKLHKAGI  113 (204)
T ss_pred             EEeCChhHHHHHHhc-------chHHHHHHHHHHHHHHhcCe
Confidence            999999888788763       14566777777788888764

>PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional

Probab=97.59  E-value=0.0075  Score=39.28  Aligned_cols=104  Identities=9%  Similarity=-0.035  Sum_probs=65.1

Q ss_pred             eEEEEEEccCCcEEEEEEeecCCCCc---------hhHHHHHHHHHHHHHhcCCCCce--eeeeeeEe-----CCeEEEE
Q psy8006          20 TVRRCRDRKNGTQYAAKFLRKKRRST---------DLKAEILHEVAVLEACRCNSRIV--QLHQVFES-----SHDMILL   83 (126)
Q Consensus        20 ~v~~~~~~~~~~~~aiK~~~~~~~~~---------~~~~~~~~e~~~l~~~~~~~~iv--~l~~~~~~-----~~~~~lv   83 (126)
                      .|.+...  .|+.+.+|.........         .......+|...+..+.. .+|.  ....+...     ....++|
T Consensus        37 rvvr~~~--~g~~~~vKr~~~~~~~~~~k~l~~~~~p~~~a~rE~~~l~~L~~-~GIptP~pVa~~e~~~~~~~~~s~LV  113 (268)
T PRK15123         37 RTLRFEL--AGKSYFLKWHRGTGWGEIFKNLLSLRMPVLGADREWRAIHRLHE-VGVDTMTGVAFGERGSNPATRTSFII  113 (268)
T ss_pred             eEEEEEE--CCEEEEEEEecCCcHHHHhhhhcccccccHHHHHHHHHHHHHHH-cCCCCCCeeEEEEecCCCccceeEEE
Confidence            3444432  35678888664332110         011136788888877754 2332  33223322     2357899


Q ss_pred             EeccCcc-cHHHHHHh--cCCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          84 LELLTSA-VDSKIRES--FGSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        84 ~e~~~~~-~L~~~~~~--~~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      +|++++. +|.+++..  ....++.....++.++...+.-||+.|+
T Consensus       114 te~l~~~~sL~~~~~~~~~~~~~~~~~~~ll~~la~~i~~LH~~Gi  159 (268)
T PRK15123        114 TEDLAPTISLEDYCADWATNPPDPRLKRMLIKRVATMVRDMHAAGI  159 (268)
T ss_pred             EeeCCCCccHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHHCcC
Confidence            9999986 78888753  2345667778999999999999999875

>KOG4158|consensus

Probab=97.54  E-value=0.00023  Score=48.54  Aligned_cols=61  Identities=13%  Similarity=0.162  Sum_probs=48.8

Q ss_pred             CCCceeeeeeeEe---------------------------CCeEEEEEeccCcccHHHHHHhcCCCCHHHHHHHHHHHHH
Q psy8006          64 NSRIVQLHQVFES---------------------------SHDMILLLELLTSAVDSKIRESFGSKSESGVQNCLEPSIS  116 (126)
Q Consensus        64 ~~~iv~l~~~~~~---------------------------~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~  116 (126)
                      |||||++.+.|.+                           +..+|+||.-.+.. |..++.. ...+.....-++.|+++
T Consensus       275 HPNIvri~~aF~dsv~~lPda~~~YPdalp~R~~p~g~g~~~tlylvMkrY~~t-Lr~yl~~-~~~s~r~~~~~laQlLE  352 (598)
T KOG4158|consen  275 HPNIVRIQTAFIDSVKVLPDAIERYPDALPARWYPSGAGEPKTLYLVMKRYRQT-LREYLWT-RHRSYRTGRVILAQLLE  352 (598)
T ss_pred             CCCEEeehhhhhhhhccCCchhhhCcccccceecccccCCCceEEEehhcchhh-HHHHHhc-CCCchHHHHHHHHHHHH
Confidence            4999999877621                           22589999988777 8888875 45788888999999999


Q ss_pred             HHHhhhccCC
Q psy8006         117 VFSSLSKFET  126 (126)
Q Consensus       117 ~l~~l~~~~~  126 (126)
                      |+.|||+.++
T Consensus       353 av~hL~~hgv  362 (598)
T KOG4158|consen  353 AVTHLHKHGV  362 (598)
T ss_pred             HHHHHHHccc
Confidence            9999999764

>KOG1266|consensus

Probab=97.47  E-value=0.00011  Score=48.76  Aligned_cols=67  Identities=15%  Similarity=0.195  Sum_probs=52.3

Q ss_pred             HHHhcCCCCceeeeeeeEeCC-----eEEEEEeccCcccHHHHHHhc----CCCCHHHHHHHHHHHHHHHHhhhccC
Q psy8006          58 LEACRCNSRIVQLHQVFESSH-----DMILLLELLTSAVDSKIRESF----GSKSESGVQNCLEPSISVFSSLSKFE  125 (126)
Q Consensus        58 l~~~~~~~~iv~l~~~~~~~~-----~~~lv~e~~~~~~L~~~~~~~----~~~~~~~~~~~~~qi~~~l~~l~~~~  125 (126)
                      +..+-| .|+++++.++.+..     ....+.||+..|++.+++++-    ..+....-.+|+.||++||.|||.+.
T Consensus       121 llqlvH-snlvkfH~yw~d~K~~e~~rviFiteymssgs~~~fLkrt~~~~~a~~~~~wkkw~tqIlsal~yLhs~~  196 (458)
T KOG1266|consen  121 LLQLVH-SNLVKFHKYWTDKKYEEKPRVIFITEYMSSGSLKQFLKRTKKNQKALFQKAWKKWCTQILSALSYLHSCD  196 (458)
T ss_pred             HHHHHH-HHHHHHHHhhcccccccccceEEEEecccchhHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhhhhhhccC
Confidence            344556 78999888875433     467789999999999988752    25777788899999999999999764

>cd05150 APH Aminoglycoside 3'-phosphotransferase (APH)

Probab=97.41  E-value=0.0039  Score=39.72  Aligned_cols=99  Identities=13%  Similarity=0.072  Sum_probs=63.4

Q ss_pred             ccCccc-eeEEEEEEccCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeEEEEEeccCccc
Q psy8006          13 NDMGKY-ATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLLELLTSAV   91 (126)
Q Consensus        13 lg~g~~-~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~~lv~e~~~~~~   91 (126)
                      |..|.. +.||+....  +..+.+|......     .....+|+.++..+..+-.+++++.....++..++||++++|.+
T Consensus         6 ~~~g~~~~~v~~~~~~--~~~~~vk~~~~~~-----~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~lv~e~i~G~~   78 (244)
T cd05150           6 VTEGQSGATVYRLDGK--NPGLYLKIAPSGP-----TYELEREAERLRWLAGKLPVPEVIDYGSDDGRAWLLTSAVPGVP   78 (244)
T ss_pred             cCCCCCcCeEEEEcCC--CCcEEEEecCCCc-----ccchHHHHHHHHHHHhcCCCCeEEEEEecCCccEEEEEeeCCcc
Confidence            444555 667877543  3567888775442     12466788888887643445566666665567889999999987


Q ss_pred             HHHHHHhcCCCCHHHHHHHHHHHHHHHHhhhcc
Q psy8006          92 DSKIRESFGSKSESGVQNCLEPSISVFSSLSKF  124 (126)
Q Consensus        92 L~~~~~~~~~~~~~~~~~~~~qi~~~l~~l~~~  124 (126)
                      +.....   ...   ...++.|+...+..||..
T Consensus        79 l~~~~~---~~~---~~~~~~~l~~~l~~lH~i  105 (244)
T cd05150          79 AAALWE---ELE---PERLVDALAEALRRLHAL  105 (244)
T ss_pred             HhHhhc---ccC---HHHHHHHHHHHHHHHhcC
Confidence            753321   111   234677788888888864

The APH subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). APH catalyzes the transfer of the gamma-phosphoryl group from ATP to aminoglycoside antibiotics such as kanamycin, streptomycin, neomycin, and gentamicin, among others. The aminoglycoside antibiotics target the 30S ribosome and promote miscoding, leading to the production of defective proteins which insert into the bacterial membrane, resulting in membrane damage and the ultimate demise of the bacterium. Phosphorylation of the aminoglycoside antibiotics results in their inactivation, leading to bacterial antibiotic resistance. The APH gene is found on transposons and plasmids and is thought to have originated as a self-defense mechanism used by microorganisms that produce the antibio

>COG2112 Predicted Ser/Thr protein kinase [Signal transduction mechanisms]

Probab=97.36  E-value=0.003  Score=38.69  Aligned_cols=78  Identities=15%  Similarity=0.115  Sum_probs=55.4

Q ss_pred             ceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCce-eeeeeeEeCCeEEEEEecc
Q psy8006           9 SSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIV-QLHQVFESSHDMILLLELL   87 (126)
Q Consensus         9 ~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv-~l~~~~~~~~~~~lv~e~~   87 (126)
                      ..+.|++|.+|.||.+...  |..+|+|+-+...    .+..+..|+.++..+.. .++. +++.+    +..++.|||.
T Consensus        26 v~~~L~KG~~s~Vyl~~~~--~~~~a~Kvrr~ds----~r~~l~kEakiLeil~g-~~~~p~vy~y----g~~~i~me~i   94 (201)
T COG2112          26 VEKELAKGTTSVVYLGEWR--GGEVALKVRRRDS----PRRNLEKEAKILEILAG-EGVTPEVYFY----GEDFIRMEYI   94 (201)
T ss_pred             hhhhhhcccccEEEEeecc--CceEEEEEecCCc----chhhHHHHHHHHHHhhh-cCCCceEEEe----chhhhhhhhh
Confidence            3568999999999999764  5588999876543    24468899999998877 4443 33322    3345569999


Q ss_pred             CcccHHHHHH
Q psy8006          88 TSAVDSKIRE   97 (126)
Q Consensus        88 ~~~~L~~~~~   97 (126)
                      +|..|.+...
T Consensus        95 ~G~~L~~~~~  104 (201)
T COG2112          95 DGRPLGKLEI  104 (201)
T ss_pred             cCcchhhhhh
Confidence            9987765544

>COG0661 AarF Predicted unusual protein kinase [General function prediction only]

Probab=97.10  E-value=0.0011  Score=46.80  Aligned_cols=107  Identities=23%  Similarity=0.185  Sum_probs=63.8

Q ss_pred             ceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCc------------------------------------hhHHH--
Q psy8006           9 SSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRST------------------------------------DLKAE--   50 (126)
Q Consensus         9 ~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~------------------------------------~~~~~--   50 (126)
                      ....++.++-|.||.|...+ |+.||||+.++.....                                    ....+  
T Consensus       129 ~~~PiAsASIaQVH~A~L~s-G~~VAVKVqrPgi~~~i~~DL~il~~~a~~~~~~~~~~~~l~~~~vv~e~~~~l~~ElD  207 (517)
T COG0661         129 EPEPIASASIAQVHRAVLKS-GEEVAVKVQRPGIRERIEADLKLLRRLARLIKRLPPGGRRLDLVEVVDEFEKRLREELD  207 (517)
T ss_pred             CCCchhhhhHhhheeEEecC-CCEEEEEecCCChHHHHHHHHHHHHHHHHHHHHcCCccccCChHHHHHHHHHHHHHHhC
Confidence            45789999999999998765 9999999998842110                                    00111  


Q ss_pred             HHHHHHHHHHhcC---CCCceeeeeeeE-eCCeEEEEEeccCcccHHHH--HHhcC----CCCHHHHHHHHHHHHH
Q psy8006          51 ILHEVAVLEACRC---NSRIVQLHQVFE-SSHDMILLLELLTSAVDSKI--RESFG----SKSESGVQNCLEPSIS  116 (126)
Q Consensus        51 ~~~e~~~l~~~~~---~~~iv~l~~~~~-~~~~~~lv~e~~~~~~L~~~--~~~~~----~~~~~~~~~~~~qi~~  116 (126)
                      +.+|...+.++..   +..-+.+...+. -.+.-.++|||++|-.+.++  ++..+    .+.+..+..++.|++.
T Consensus       208 y~~EA~n~~~~~~nf~~~~~v~VP~V~we~t~~~VLtmE~i~Gi~i~d~~~l~~~g~d~k~ia~~~~~~f~~q~~~  283 (517)
T COG0661         208 YRREAANAERFRENFKDDPDVYVPKVYWEYTTRRVLTMEWIDGIKISDIAALKSAGIDRKELAELLVRAFLRQLLR  283 (517)
T ss_pred             HHHHHHHHHHHHHHcCCCCCeEeceeehhccCCcEEEEEeeCCEecccHHHHHhcCCCHHHHHHHHHHHHHHHHHh
Confidence            3445544444432   122333444442 24557799999999888665  34322    2344445555556554

>PF06293 Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family; InterPro: IPR010440 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases

Probab=97.08  E-value=0.022  Score=35.52  Aligned_cols=76  Identities=14%  Similarity=0.032  Sum_probs=54.3

Q ss_pred             HHHHHHHHHHHhcCCCC--ceeeeeeeEeC----CeEEEEEeccCcc-cHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhh
Q psy8006          50 EILHEVAVLEACRCNSR--IVQLHQVFESS----HDMILLLELLTSA-VDSKIRESFGSKSESGVQNCLEPSISVFSSLS  122 (126)
Q Consensus        50 ~~~~e~~~l~~~~~~~~--iv~l~~~~~~~----~~~~lv~e~~~~~-~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~l~  122 (126)
                      ...+|...+..+.. .+  ++....+....    ...++++|.+++. +|.+++......+......++.++...++-||
T Consensus        57 ra~~E~~~~~~L~~-~Gi~tP~pva~~~~r~~~~~~s~lite~l~~~~~L~~~~~~~~~~~~~~~~~ll~~l~~~i~~lH  135 (206)
T PF06293_consen   57 RAKREWRNLQRLRE-AGIPTPEPVAYGERRKGGGYRSYLITEALPGAQDLRDLLQQWEQLDPSQRRELLRALARLIAKLH  135 (206)
T ss_pred             HHHHHHHHHHHHHH-cCCCCCcEEEEEEEcCCCceeEEEEEEeCCCcccHHHHHHhhcccchhhHHHHHHHHHHHHHHHH
Confidence            57788887777654 22  23333443321    2468999999874 68888886444677778899999999999999


Q ss_pred             ccCC
Q psy8006         123 KFET  126 (126)
Q Consensus       123 ~~~~  126 (126)
                      +.++
T Consensus       136 ~~gi  139 (206)
T PF06293_consen  136 DAGI  139 (206)
T ss_pred             HCcC
Confidence            9874

Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents lipopolysaccharide kinases which are related to protein kinases IPR000719 from INTERPRO. This family includes waaP (rfaP) gene product is required for the addition of phosphate to O-4 of the first heptose residue of the lipopolysaccharide (LPS) inner core region. It has previously been shown that WaaP is necessary for resistance to hydrophobic and polycationic antimicrobials in E. coli and that it is required for virulence in invasive strains of Salmonella enterica [].; GO: 0005524 ATP binding, 0016773 phosphotransferase activity, alcohol group as acceptor, 0009103 lipopolysaccharide biosynthetic process, 0016020 membrane

>PF10707 YrbL-PhoP_reg: PhoP regulatory network protein YrbL; InterPro: IPR019647 This entry represents proteins that are activated by the protein PhoP

Probab=96.81  E-value=0.053  Score=33.83  Aligned_cols=104  Identities=15%  Similarity=0.161  Sum_probs=68.8

Q ss_pred             ceeeccCccceeEEEEEEccCCcEEEEEEeecCCC--------------CchhHHHHHHHHHHHHHhc------CCCCce
Q psy8006           9 SSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRR--------------STDLKAEILHEVAVLEACR------CNSRIV   68 (126)
Q Consensus         9 ~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~--------------~~~~~~~~~~e~~~l~~~~------~~~~iv   68 (126)
                      ...++|+|+.-.||...+   ....+||+..+...              ......+..+|+.-...+.      . .++.
T Consensus         5 ~~~~i~~G~~R~cy~HP~---dp~~cIKV~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~E~~~y~~l~~~~~~~~-~~i~   80 (199)
T PF10707_consen    5 ESDLIAQGGERDCYQHPD---DPNLCIKVMRPDRGERRRPFKRWLKRLRPKSRYRQNRRELRYYKQLSLRRGVDW-SHIP   80 (199)
T ss_pred             CCcccccCCCceEEECCC---CCCeEEEEEccccccccccchhHHHhhcccchhHHHHHHHHHHHHHhhccCCcc-cccc
Confidence            467899999988886544   34478999887761              1112335667776655555      4 7899


Q ss_pred             eeeeeeEeCCeEEEEEeccCc------ccHHHHHHhcCCCCHHHHHHHHHHHHHHH
Q psy8006          69 QLHQVFESSHDMILLLELLTS------AVDSKIRESFGSKSESGVQNCLEPSISVF  118 (126)
Q Consensus        69 ~l~~~~~~~~~~~lv~e~~~~------~~L~~~~~~~~~~~~~~~~~~~~qi~~~l  118 (126)
                      +++|...++--+-+|+|....      .+|.+++++ +.+++ .....+.++...+
T Consensus        81 r~~G~veT~~G~Glv~e~I~d~dG~~s~TL~~~l~~-~~~~~-~~~~~L~~f~~~l  134 (199)
T PF10707_consen   81 RFYGFVETNLGLGLVVELIRDADGNISPTLEDYLKE-GGLTE-ELRQALDEFKRYL  134 (199)
T ss_pred             cEeEEEecCCceEEEEEEEECCCCCcCccHHHHHHc-CCccH-HHHHHHHHHHHHH
Confidence            999999988888888887532      357788865 34665 4455555554444

PhoP controls the expression of a large number of genes that mediate adaptation to low Mg2+ environments and/or virulence in several bacterial species. YbrL is proposed to be acting in a loop activity with PhoP and PrmA analogous to the multi-component loop in Salmonella sp., where the PhoP-dependent PmrD protein activates the regulatory protein PmrA, and the activated PmrA then represses transcription from the PmrD promoter which harbours binding sites for both the PhoP and PmrA proteins. Expression of YrbL is induced in low Mg2+ in a PhoP-dependent fashion and repressed by Fe3+ in a PmrA-dependent manner [].

>PRK09902 hypothetical protein; Provisional

Probab=96.69  E-value=0.07  Score=33.69  Aligned_cols=115  Identities=12%  Similarity=0.051  Sum_probs=71.4

Q ss_pred             eeeccCccceeEEEEEEccCCcEEEEEEeecCCCC----chhHHHHHHHHHHHHHhcCC-CCceeee-eeeE-eC--CeE
Q psy8006          10 SIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRS----TDLKAEILHEVAVLEACRCN-SRIVQLH-QVFE-SS--HDM   80 (126)
Q Consensus        10 ~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~----~~~~~~~~~e~~~l~~~~~~-~~iv~l~-~~~~-~~--~~~   80 (126)
                      +.--++|+.+.|+.-...  |..+-+|........    +-....+.+|...+..+... -.+++.. +-.. .+  ...
T Consensus        23 ~pN~~rgG~SgV~r~~~~--g~~~ylKrq~nhl~~s~r~P~g~ptf~rE~~~L~~L~~~GvPVP~pvf~~~~k~~~~~rA  100 (216)
T PRK09902         23 EPNYRRNGMSGVQCVERN--GKKLYVKRMTHHLFHSVRYPFGRPTIVREVAVIKELERAGVIVPKIVFGEAVKIEGEWRA  100 (216)
T ss_pred             CCCcCCCCcceEEEEEeC--CcEEEEEeccCcccccccCCCCchHHHHHHHHHHHHHHcCCCCCccceeeeeccCCceEE
Confidence            333466888889876543  235778866521110    11234699999999988641 1233332 1111 11  246


Q ss_pred             EEEEeccCc-ccHHHHHHhc--CCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          81 ILLLELLTS-AVDSKIRESF--GSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        81 ~lv~e~~~~-~~L~~~~~~~--~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      +||.|-+++ .+|.+++...  .+.++..-..+..++..+++-||+.++
T Consensus       101 ~LVTe~L~g~~~L~~~l~~~~~~~~~~~~k~~il~~va~~ia~LH~~Gv  149 (216)
T PRK09902        101 LLVTEDMAGFISIADWYAQHAVSPYSDEVRQAMLKAVALAFKKMHSVNR  149 (216)
T ss_pred             EEEEEeCCCCccHHHHHhcCCcCCcchHHHHHHHHHHHHHHHHHHHCCC
Confidence            788986664 4688887653  245666667899999999999999874

>KOG1235|consensus

Probab=96.51  E-value=0.029  Score=40.09  Aligned_cols=34  Identities=21%  Similarity=0.156  Sum_probs=29.0

Q ss_pred             ccceeeccCccceeEEEEEEccCCcEEEEEEeecC
Q psy8006           7 IISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKK   41 (126)
Q Consensus         7 ~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~   41 (126)
                      .++.+.|+.-+.|.|++|..+. |..||||+.++.
T Consensus       163 ~f~~~piaaASlaQVhrA~L~~-G~~VaVKVQ~P~  196 (538)
T KOG1235|consen  163 EFDEEPIAAASLAQVHRARLKN-GEDVAVKVQHPG  196 (538)
T ss_pred             hcCcchhhhcchhheEEEEecC-CCEEEEEecCcC
Confidence            3457789999999999998866 999999998874

>PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases

Probab=96.37  E-value=0.055  Score=33.43  Aligned_cols=97  Identities=16%  Similarity=0.147  Sum_probs=54.4

Q ss_pred             EEEEEEccCCcEEEEEEeecCCCC-----------------------ch-hHHHHHHHHHHHHHhcCCC--Cceeeeeee
Q psy8006          21 VRRCRDRKNGTQYAAKFLRKKRRS-----------------------TD-LKAEILHEVAVLEACRCNS--RIVQLHQVF   74 (126)
Q Consensus        21 v~~~~~~~~~~~~aiK~~~~~~~~-----------------------~~-~~~~~~~e~~~l~~~~~~~--~iv~l~~~~   74 (126)
                      ||.|... .+..+|+|.-+.....                       .. ...+..+|...|..+.. .  ++++.++..
T Consensus         2 Vy~~~~~-~~~~~a~K~~r~~~~~Fk~~~~y~~~~~r~~~~~~~~~~~~~~~~~~~~E~~~L~~l~~-~Gv~vP~p~~~~   79 (188)
T PF01163_consen    2 VYHAIDP-DGEEVAVKIYRTGRTSFKRRKKYRDYDYRFKKYRHKSSWRYLIREWAKKEFRNLKRLYE-AGVPVPKPYDYN   79 (188)
T ss_dssp             EEEEEEC-TTEEEEEEEE-S---SS-HHHHHTTTSTTSTTC--G--CHHHHHHHHHHHHHHHHHCCC-TT-SS--EEEEE
T ss_pred             EEEEECC-CCCEEEEEEeccCceEEEEeeeeecccchhcccccccCHHHHHHHHHHHHHHHHHHHHH-CCccCCcEEEEe
Confidence            7777763 4668899977652110                       00 12347899999999976 4  445554332


Q ss_pred             EeCCeEEEEEeccC--cccHHHHHHhcCCCCHHHHHHHHHHHHHHHHh-hhccC
Q psy8006          75 ESSHDMILLLELLT--SAVDSKIRESFGSKSESGVQNCLEPSISVFSS-LSKFE  125 (126)
Q Consensus        75 ~~~~~~~lv~e~~~--~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~-l~~~~  125 (126)
                          .-.|||||++  +..+..+....  ++......++.+++..+.. +|+.+
T Consensus        80 ----~~~ivME~I~~~G~~~~~l~~~~--~~~~~~~~~~~~il~~~~~~~~~~g  127 (188)
T PF01163_consen   80 ----RNVIVMEYIGEDGVPLPRLKDVD--LSPEEPKELLEEILEEIIKMLHKAG  127 (188)
T ss_dssp             ----TTEEEEE--EETTEEGGCHHHCG--GGGSTHHHHHHHHHHHHHHHHHCTT
T ss_pred             ----CCEEEEEecCCCccchhhHHhcc--ccchhHHHHHHHHHHHHHHHHHhcC
Confidence                3469999999  66555444331  2234456677777774444 45655

Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A.

>KOG1033|consensus

Probab=96.13  E-value=0.00097  Score=46.52  Aligned_cols=70  Identities=17%  Similarity=0.291  Sum_probs=57.2

Q ss_pred             cccccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeE
Q psy8006           4 IKNIISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFE   75 (126)
Q Consensus         4 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~   75 (126)
                      .+++..+..+|.|+||.|+.+...-.+..+|||.|..... .....+..+++..+..+.| +++++++..+.
T Consensus        48 a~~~e~~~~~~~~g~~~~~~~~n~~d~~~~avkritlkn~-e~s~~rvl~~~~s~a~feh-~g~~~~~ha~~  117 (516)
T KOG1033|consen   48 ANDFEPGQCLGRGGFGVVFSAQNKADENKYAVKRITLKNR-EESRSRVLREVSSLAEFEH-PGIKRYFHAWY  117 (516)
T ss_pred             hccccccccccccCccccCCccccccchhhHHHHhcccch-hhhhhhhhccccchhhhcc-cchhhheecee
Confidence            3567788899999999999999888888899999987654 2334568888888999998 99999877764

>PF03109 ABC1: ABC1 family; InterPro: IPR004147 This entry includes ABC1 from yeast [] and AarF from Escherichia coli []

Probab=96.13  E-value=0.0036  Score=35.69  Aligned_cols=48  Identities=21%  Similarity=0.223  Sum_probs=35.3

Q ss_pred             cceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHh
Q psy8006           8 ISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEAC   61 (126)
Q Consensus         8 ~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~   61 (126)
                      ++...+++|+.|.||+|.... |..||||+.++..     ...+...+.++..+
T Consensus        14 fd~~PlasASiaQVh~a~l~~-g~~VaVKV~rP~i-----~~~i~~Dl~~l~~~   61 (119)
T PF03109_consen   14 FDPEPLASASIAQVHRARLKD-GEEVAVKVQRPGI-----EEQIEADLRILRRL   61 (119)
T ss_pred             CCcchhhheehhhheeeeecc-cchhhhhhcchHH-----HHHHHHHHHHHHHH
Confidence            457789999999999998754 8999999998753     22455555555443

These proteins have a nuclear or mitochondrial subcellular location in eukaryotes. The exact molecular functions of these proteins is not clear, however yeast ABC1 suppresses a cytochrome b mRNA translation defect and is essential for the electron transfer in the bc 1 complex [] and E. coli AarF is required for ubiquinone production []. It has been suggested that members of the ABC1 family are novel chaperonins []. These proteins are unrelated to the ABC transporter proteins.

>cd05157 ETNK_euk Ethanolamine kinase (ETNK) in eukaryotes

Probab=96.04  E-value=0.17  Score=31.94  Aligned_cols=100  Identities=9%  Similarity=0.026  Sum_probs=57.6

Q ss_pred             eeeccCccceeEEEEEEcc-CCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeEEEEEeccC
Q psy8006          10 SIINDMGKYATVRRCRDRK-NGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLLELLT   88 (126)
Q Consensus        10 ~~~lg~g~~~~v~~~~~~~-~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~~lv~e~~~   88 (126)
                      .+.|..|-...+|+..... .+..+.+|........   .....+|..++..+....-.++++....    -.++|||++
T Consensus         3 i~~l~gG~tN~~~~v~~~~~~~~~~vlR~~~~~~~~---~~d~~~E~~~~~~l~~~gl~P~v~~~~~----~~~l~e~i~   75 (235)
T cd05157           3 FKRFTGGITNKLVKVSNKEDNQDAVLVRVYGNKTEL---IIDRERELRIHKLLSKHGLAPKLYATFQ----NGLIYEFIP   75 (235)
T ss_pred             EEEcCCcccceEEEEEcCCCCCCeEEEEEccCCccc---eecHHHHHHHHHHHHhCCCCCeEEEEeC----CcEEEEeeC
Confidence            3567778788899886543 2457888866543211   1123467888888754233344443322    237999999


Q ss_pred             cccHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhhcc
Q psy8006          89 SAVDSKIRESFGSKSESGVQNCLEPSISVFSSLSKF  124 (126)
Q Consensus        89 ~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~l~~~  124 (126)
                      +.++....     +..   ...+.+++++++.||+.
T Consensus        76 G~~l~~~~-----~~~---~~~~~~la~~l~~lH~~  103 (235)
T cd05157          76 GRTLEPED-----LRN---PKIYRLIARELAKLHSI  103 (235)
T ss_pred             CCcCCHHH-----ccC---hHHHHHHHHHHHHHhcc
Confidence            87653210     111   22456677777777765

ETNK is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major phospholipid, phosphatidylethanolamine (PtdEtn). Unlike ChoK, ETNK shows specific activity for its substrate, and displays negligible activity towards N-methylated derivatives of Etn. The Drosophila ETNK is implicated in development and neuronal function. Mammals contain two ETNK proteins, ETNK1 and ETNK2. ETNK1 selectively increases Etn uptake and phosphorylation, as well as PtdEtn synthesis. ETNK2 is found primarily in the liver and reproductive tissues. It plays a critical role in regulating placental hemostasis to support late embryo

>COG0478 RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms]

Probab=95.75  E-value=0.17  Score=33.38  Aligned_cols=81  Identities=17%  Similarity=0.143  Sum_probs=55.4

Q ss_pred             ceeeccCccceeEEEEEEccCCcEEEEEEeecCCCC-----------------c---hhHHHHHHHHHHHHHhcCC-CCc
Q psy8006           9 SSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRS-----------------T---DLKAEILHEVAVLEACRCN-SRI   67 (126)
Q Consensus         9 ~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~-----------------~---~~~~~~~~e~~~l~~~~~~-~~i   67 (126)
                      .+..||.|.-|.||.|.+. .|.++++|.=+....+                 +   ..+....+|.++|..+... -.+
T Consensus        95 iG~~IGvGKEsdVY~~~~~-~g~~~~vKfHR~GrtsFrkvk~~R~y~~~~~h~sWl~~sRl~A~rEf~~L~~L~~~G~~V  173 (304)
T COG0478          95 IGTKIGVGKESDVYVAIDP-KGRKVAVKFHRLGRTSFRKVKRNRDYLADKEHGSWLYVSRLAAEREFEALQRLYPEGVKV  173 (304)
T ss_pred             hccccccCccceEEEEECC-CCCEEEEEEeecCchhhhhhcchhhhhccccCcchhhhHHHHHHHHHHHHHHhhhcCCCC
Confidence            3578999999999999886 5888999965542211                 0   0122367899999998752 133


Q ss_pred             eeeeeeeEeCCeEEEEEeccCcccHHH
Q psy8006          68 VQLHQVFESSHDMILLLELLTSAVDSK   94 (126)
Q Consensus        68 v~l~~~~~~~~~~~lv~e~~~~~~L~~   94 (126)
                      ++.+    ..+...+|||+.++-.|..
T Consensus       174 P~P~----~~nRHaVvMe~ieG~eL~~  196 (304)
T COG0478         174 PKPI----AWNRHAVVMEYIEGVELYR  196 (304)
T ss_pred             CCcc----ccccceeeeehcccceeec
Confidence            3332    3456789999999977643

>PRK09550 mtnK methylthioribose kinase; Reviewed

Probab=95.55  E-value=0.49  Score=32.86  Aligned_cols=105  Identities=12%  Similarity=-0.068  Sum_probs=61.5

Q ss_pred             ceeeccCccceeEEEEEEccCCcEEEEEEeecCCC--C---chhHHHHHHHHHHHHHhcCC--CCceeeeeeeEeCCeEE
Q psy8006           9 SSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRR--S---TDLKAEILHEVAVLEACRCN--SRIVQLHQVFESSHDMI   81 (126)
Q Consensus         9 ~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~--~---~~~~~~~~~e~~~l~~~~~~--~~iv~l~~~~~~~~~~~   81 (126)
                      ..+.+|.|.+..||+......++.+.+|.-.+...  +   +-...+...|.+.|..+...  ..+++++.+  +++..+
T Consensus        30 ~~~elggGn~N~VyrV~~~~g~~svIVKqa~p~~r~~g~~wpl~~eR~~~Eae~L~~l~~~~p~~VPkV~~~--D~~~~~  107 (401)
T PRK09550         30 TAREIGDGNLNLVFRVSDTEGGKSVIVKQALPYVRVVGESWPLTLDRARIEAEALKIQAKYVPDLVPKVYHY--DEELAV  107 (401)
T ss_pred             eeeEcCCCceEEEEEEEeCCCCeEEEEEecCcccccccccccccHHHHHHHHHHHHHHHhhCCCCCCeEEEE--CCCCCE
Confidence            34678999999999998864335789997543211  0   11234567788888776421  345555544  335578


Q ss_pred             EEEeccCccc-HHHHHHhcCCCCHHHHHHHHHHHHH
Q psy8006          82 LLLELLTSAV-DSKIRESFGSKSESGVQNCLEPSIS  116 (126)
Q Consensus        82 lv~e~~~~~~-L~~~~~~~~~~~~~~~~~~~~qi~~  116 (126)
                      +|||++++.. +.+.+.....+ +..+..+..-+..
T Consensus       108 lVME~L~~~~~lr~~Ll~g~~~-p~~a~~iG~~LA~  142 (401)
T PRK09550        108 TVMEDLSDHKILRKGLIDGKKY-PKLAEHIGEFLAR  142 (401)
T ss_pred             EEEecCCCccHHHHHHhcCCcc-HHHHHHHHHHHHH
Confidence            9999998754 34444332222 3344444443333

>KOG0606|consensus

Probab=95.47  E-value=0.015  Score=44.37  Aligned_cols=31  Identities=19%  Similarity=0.333  Sum_probs=26.9

Q ss_pred             cccceeeccCccceeEEEEEEccCCcEEEEE
Q psy8006           6 NIISSIINDMGKYATVRRCRDRKNGTQYAAK   36 (126)
Q Consensus         6 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK   36 (126)
                      +|-..+.+..|++|.||...|+.+..++|.|
T Consensus        84 df~~IklisngAygavylvrh~~trqrfa~k  114 (1205)
T KOG0606|consen   84 DFNTIKLISNGAYGAVYLVRHKETRQRFAMK  114 (1205)
T ss_pred             ccceeEeeccCCCCceeeeeccccccchhhc
Confidence            4556788999999999999999888888984

>cd05155 APH_ChoK_like_1 Uncharacterized bacterial proteins with similarity to Aminoglycoside 3'-phosphotransferase (APH) and Choline kinase (ChoK) family members

Probab=95.43  E-value=0.15  Score=32.36  Aligned_cols=99  Identities=11%  Similarity=0.031  Sum_probs=57.9

Q ss_pred             eeccCcccee-EEEEEEccCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCC--CCceeeeeeeEeC---CeEEEEE
Q psy8006          11 IINDMGKYAT-VRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCN--SRIVQLHQVFESS---HDMILLL   84 (126)
Q Consensus        11 ~~lg~g~~~~-v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~--~~iv~l~~~~~~~---~~~~lv~   84 (126)
                      +.++.|+... ||..     +..+.+|......    ....+.+|..++..+..+  -.+..........   +..+++|
T Consensus         3 ~~~~~gG~~n~vy~~-----~~~~VlR~~~~~~----~~~~~~~E~~~l~~L~~~~~v~vP~~~~~~~~~~~~~~~~~l~   73 (235)
T cd05155           3 EPVDSGGTDNATFRL-----GDDMSVRLPSAAG----YAGQVRKEQRWLPRLAPHLPLPVPEPLGKGEPGEGYPWPWSVY   73 (235)
T ss_pred             eeccCCCcccceEEc-----CCceEEEcCCccc----hHHHHHHHHHHHHHHhccCCCCCCceeecCCCccCCCcceEEE
Confidence            4566666664 7764     2346777644321    123688899988887641  1223333322221   2458899


Q ss_pred             eccCcccHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhhccC
Q psy8006          85 ELLTSAVDSKIRESFGSKSESGVQNCLEPSISVFSSLSKFE  125 (126)
Q Consensus        85 e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~l~~~~  125 (126)
                      ++++|.++....     .+.  ...+..++...+..||...
T Consensus        74 ~~i~G~~l~~~~-----~~~--~~~l~~~la~~l~~LH~i~  107 (235)
T cd05155          74 RWLEGETATAAA-----LSD--PSEFAEDLADFLAALRQID  107 (235)
T ss_pred             EeecCCCCCccc-----cCC--HHHHHHHHHHHHHHHhCCC
Confidence            999998774321     121  2256778888888888753

The APH/ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates, such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides, and macrolides leads to their inactivation and to bacterial antibiotic resista

>PF13095 FTA2: Kinetochore Sim4 complex subunit FTA2

Probab=95.23  E-value=0.42  Score=30.08  Aligned_cols=107  Identities=12%  Similarity=0.058  Sum_probs=64.5

Q ss_pred             ccccceeeccCccc-eeEEEEEEccCCcEEEEEEeecCCC----------Cc---------hhHHHHHHHHHHHHHhcCC
Q psy8006           5 KNIISSIINDMGKY-ATVRRCRDRKNGTQYAAKFLRKKRR----------ST---------DLKAEILHEVAVLEACRCN   64 (126)
Q Consensus         5 ~~~~~~~~lg~g~~-~~v~~~~~~~~~~~~aiK~~~~~~~----------~~---------~~~~~~~~e~~~l~~~~~~   64 (126)
                      .++.--+.||.|.. |.||++...  |..+|+|.+..-..          ..         .....|..|.+...+++..
T Consensus        37 ~~I~flefLg~g~~~~~V~kv~I~--g~~YALKlf~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~PF~~ECRAfgRLke~  114 (207)
T PF13095_consen   37 DDIEFLEFLGHGSHDGYVFKVEID--GRIYALKLFRFWDYTEPDYTRERFAGHETSLSTPAHYADPFNCECRAFGRLKEA  114 (207)
T ss_pred             CcEeeeeecCCCCceeEEEEEEEC--CeEEEEEEeeccccCCCccccccccccccccchhhhhcChHHHHHHhhHHHHhc
Confidence            45566788999999 999999764  66999999333111          00         0111366777776666531


Q ss_pred             --CCc--eeeeeeeEeC-----------------C-eEEEEEeccCcccHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhh
Q psy8006          65 --SRI--VQLHQVFESS-----------------H-DMILLLELLTSAVDSKIRESFGSKSESGVQNCLEPSISVFSSLS  122 (126)
Q Consensus        65 --~~i--v~l~~~~~~~-----------------~-~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~l~  122 (126)
                        .++  +++++++.-.                 . ...||.||.+...         .++.    .-+.++++-+..+|
T Consensus       115 ~~e~~~Avkc~Gyl~L~~~~q~~~~~~~~~~~~~~~~~aIVKD~v~~~~---------~~~~----~~~~~~~~dl~~~~  181 (207)
T PF13095_consen  115 GREGLWAVKCHGYLLLTEDQQFEQLRQRGSDHRPLPIRAIVKDFVPDDP---------PLQI----RDIPQMLRDLKILH  181 (207)
T ss_pred             cccCceEEEeeEEEEEchHHHHHHhhcccccCCCCccEEEEEeecCCcc---------ccch----hHHHHHHHHHHHHH
Confidence              344  8888877311                 0 1245666555542         2233    33466777788888


Q ss_pred             ccCC
Q psy8006         123 KFET  126 (126)
Q Consensus       123 ~~~~  126 (126)
                      +.+|
T Consensus       182 k~gI  185 (207)
T PF13095_consen  182 KLGI  185 (207)
T ss_pred             HCCe
Confidence            8765

>KOG0576|consensus

Probab=94.89  E-value=0.0055  Score=44.46  Aligned_cols=103  Identities=8%  Similarity=0.061  Sum_probs=63.5

Q ss_pred             ccCccceeEEEEEEccCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCC-ceeeeeeeEeCCeEEEEEeccCcc-
Q psy8006          13 NDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSR-IVQLHQVFESSHDMILLLELLTSA-   90 (126)
Q Consensus        13 lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~-iv~l~~~~~~~~~~~lv~e~~~~~-   90 (126)
                      +++++++++++.+...+.... .+.+...       ....-++++|.++++ || .+..++.+......++.++++.++ 
T Consensus       250 fvK~altknpKkRptaeklL~-h~fvs~~-------l~~rl~~eLLdK~n~-P~~~v~~~~d~~~E~~~~i~~~i~s~~r  320 (829)
T KOG0576|consen  250 FVKGALTKNPKKRPTAEKLLQ-HPFVSQT-------LSRRLAIELLDKVNN-PNPVVRYLEDYDGEDYLWIPMRICSTGR  320 (829)
T ss_pred             HHHHHhcCCCccCCChhhhee-ceeeccc-------hhhHHHHHHHHHccC-CCCcccccccCCcccccchhhhhhcCCc
Confidence            345667777766655543333 4444332       123446788999999 88 666666677777889999998877 


Q ss_pred             -cHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhhcc
Q psy8006          91 -VDSKIRESFGSKSESGVQNCLEPSISVFSSLSKF  124 (126)
Q Consensus        91 -~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~l~~~  124 (126)
                       ...........+.+.+...+.+.-+..+++||+-
T Consensus       321 s~~~~~~~se~~~~~~~~~~~~r~et~~l~~l~~~  355 (829)
T KOG0576|consen  321 SSALEMTVSEIALEQYQFAYPLRKETRPLAELHSS  355 (829)
T ss_pred             cccccCChhhHhhhhhhhhhhhhhhcccccccccc
Confidence             2111111122344555566667777777777753

>PF03881 Fructosamin_kin: Fructosamine kinase; InterPro: IPR016477 Ketosamines derive from a non-enzymatic reaction between a sugar and a protein []

Probab=94.43  E-value=0.91  Score=30.11  Aligned_cols=77  Identities=25%  Similarity=0.185  Sum_probs=44.7

Q ss_pred             ccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhc--CCCCceeeeeeeEeCCeEEEEE
Q psy8006           7 IISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACR--CNSRIVQLHQVFESSHDMILLL   84 (126)
Q Consensus         7 ~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~--~~~~iv~l~~~~~~~~~~~lv~   84 (126)
                      +...+.++.|....+|+..  .++..+.+|.-.....     ..+..|.+-|+.+.  ..-.+++++......+..++++
T Consensus        19 i~~~~~v~GG~i~~a~~~~--~~~~~~FvK~~~~~~~-----~~f~~Ea~gL~~L~~~~~~~vP~vi~~G~~~~~~fLll   91 (288)
T PF03881_consen   19 ITSIEPVSGGDINEAYRLD--TDGGSYFVKVNSESGR-----DMFEGEAEGLKALAEANPIRVPKVIAWGEYDDDAFLLL   91 (288)
T ss_dssp             --EEEEE--SSSSEEEEEE--TTS-EEEEEEEEGGGC-----CHHHHHHHHHHHHCHTTTSBS--EEEEEE-SSCCEEEE
T ss_pred             eeeeEecCCCChhheEEEE--CCCccEEEEecChhhH-----HHHHHHHHHHHHHHhcCCCCCCeEEEEEeecCCceEEE
Confidence            4456677878888888765  5667889998873322     14677777777773  2145667777776667779999


Q ss_pred             eccCcc
Q psy8006          85 ELLTSA   90 (126)
Q Consensus        85 e~~~~~   90 (126)
                      ||++.+
T Consensus        92 e~l~~~   97 (288)
T PF03881_consen   92 EFLEMG   97 (288)
T ss_dssp             E-----
T ss_pred             EeecCC
Confidence            998776

Ketosamine-3-kinases (KT3K), of which fructosamine-3-kinase (FN3K) is the best-known example, catalyse the phosphorylation of the ketosamine moiety of glycated proteins. The instability of a phosphorylated ketosamine leads to its degradation, and KT3K is thus thought to be involved in protein repair []. The function of the prokaryotic members of this group has not been established. However, several lines of evidence indicate that they may function as fructosamine-3-kinases (FN3K). First, they are similar to characterised FN3K from mouse and human. Second, the Escherichia coli members are found in close proximity on the genome to fructose-6-phosphate kinase (PfkB). Last, FN3K activity has been found in a Anacystis montana (Gloeocapsa montana Kutzing 1843) [], indicating such activity-directly demonstrated in eukaryotes-is nonetheless not confined to eukaryotes. This family includes eukaryotic fructosamine-3-kinase enzymes [] which may initiate a process leading to the deglycation of fructoselysine and of glycated proteins and in the phosphorylation of 1-deoxy-1-morpholinofructose, fructoselysine, fructoseglycine, fructose and glycated lysozyme. The family also includes bacterial members that have not been characterised but probably have a similar or identical function. For additional information please see [].; PDB: 3JR1_B 3F7W_A.

>PF12260 PIP49_C: Protein-kinase domain of FAM69; InterPro: IPR022049 Family with sequence similarity 69 has three members (A, B and C)

Probab=94.17  E-value=0.22  Score=30.79  Aligned_cols=68  Identities=10%  Similarity=0.045  Sum_probs=48.0

Q ss_pred             HHHHHHHHHhcCCCCceeeeeeeEeCCeEEEEEeccCcccHHHH---HHhcCCCCHHHHHHHHHHHHHHHHhhhc
Q psy8006          52 LHEVAVLEACRCNSRIVQLHQVFESSHDMILLLELLTSAVDSKI---RESFGSKSESGVQNCLEPSISVFSSLSK  123 (126)
Q Consensus        52 ~~e~~~l~~~~~~~~iv~l~~~~~~~~~~~lv~e~~~~~~L~~~---~~~~~~~~~~~~~~~~~qi~~~l~~l~~  123 (126)
                      ..|..+++.+++.+++++++|.+-   + +++.|+.+.+++...   +..-...+.....+++.++++.+++|+.
T Consensus         7 ~~E~lll~~l~~~~~~pk~lG~CG---~-~~v~E~~~~~~~~~~~~~l~~~~~~~w~~R~~iA~~lL~~l~~l~~   77 (188)
T PF12260_consen    7 NNEPLLLQLLQGSEPFPKLLGSCG---R-FYVVEYVGAGSLYGIYRPLSQFLQSPWEQRAKIALQLLELLEELDH   77 (188)
T ss_pred             ccHHHHHHHcCCCCCCCCeeeECC---C-EEEEEeecCccccccccccccccccCHHHHHHHHHHHHHHHHHHhc
Confidence            357778888887679999999983   2 457888886644211   1111234677888999999999999875

Proteins in this uncharacterised family are described as transmembrane proteins.

>PRK12396 5-methylribose kinase; Reviewed

Probab=93.67  E-value=1.6  Score=30.47  Aligned_cols=107  Identities=11%  Similarity=-0.080  Sum_probs=60.5

Q ss_pred             eeeccCccceeEEEEEEccCCcEEEEEEeecCC----CCchhHHHHHHHHHHHHHhcC-CC-CceeeeeeeEeCCeEEEE
Q psy8006          10 SIINDMGKYATVRRCRDRKNGTQYAAKFLRKKR----RSTDLKAEILHEVAVLEACRC-NS-RIVQLHQVFESSHDMILL   83 (126)
Q Consensus        10 ~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~----~~~~~~~~~~~e~~~l~~~~~-~~-~iv~l~~~~~~~~~~~lv   83 (126)
                      .+.||-|...-||++.+...+..++||.-.+..    .++-...+...|.++|+.... .| .+++++.  .++....+|
T Consensus        34 ~~eigdGnlN~VfrV~~~~~~~svIVKQAlp~vRv~~swpL~~~R~~~E~~aL~~~~~~~P~~VP~vy~--~D~e~~~~v  111 (409)
T PRK12396         34 CKEIGDGNLNYVFRVWDEQKNISVIVKQAGDTARISDEFKLSTNRIRIESDVLQLEEELAPGLVPKVYL--FDSVMNCCV  111 (409)
T ss_pred             eeEcCCCceEEEEEEeeCCCCceEEEEeccHhhccCCCCCCChHHHHHHHHHHHHHHhhCCCcCCeEEE--ECcHHhhHH
Confidence            567899999999999874334568888544321    112234467778888887643 24 3344432  234456689


Q ss_pred             EeccCccc-HHHHHHhcCCCCHHHHHHHHHHHHHHHH
Q psy8006          84 LELLTSAV-DSKIRESFGSKSESGVQNCLEPSISVFS  119 (126)
Q Consensus        84 ~e~~~~~~-L~~~~~~~~~~~~~~~~~~~~qi~~~l~  119 (126)
                      ||+++... |.+.+-.+... +..+..+..-++..+-
T Consensus       112 MEdL~~~~ilR~~Li~G~~~-p~~A~~ig~fla~tlf  147 (409)
T PRK12396        112 MEDLSDHTILRTALINHEIF-PRLADDLTTFLVNTLL  147 (409)
T ss_pred             HHhCcccHHHHHHHHcCCcC-hhHHHHHHHHHHHHHh
Confidence            99997643 34444332223 3344444444444444

>KOG2270|consensus

Probab=93.58  E-value=1.3  Score=30.99  Aligned_cols=106  Identities=17%  Similarity=0.178  Sum_probs=63.3

Q ss_pred             eeccCccceeEEEEEEccCCcEEEEEEeecCCC-----------------------Cchh-HHHHHHHHHHHHHhcCCCC
Q psy8006          11 IINDMGKYATVRRCRDRKNGTQYAAKFLRKKRR-----------------------STDL-KAEILHEVAVLEACRCNSR   66 (126)
Q Consensus        11 ~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~-----------------------~~~~-~~~~~~e~~~l~~~~~~~~   66 (126)
                      ..|..|.-+.||.+.. ..|..+|||+..-+.+                       +... ..+..+|..-+.++.. ..
T Consensus       150 GCiSTGKEANVYHat~-~dG~~~AIKIYKTSILvFKDRdRYV~GEfRFRhgyck~NPRKMVk~WAEKE~RNLkRl~~-aG  227 (520)
T KOG2270|consen  150 GCISTGKEANVYHATE-EDGSEFAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKHNPRKMVKTWAEKEMRNLKRLNN-AG  227 (520)
T ss_pred             cccccCccceeEeeec-CCCceEEEEEEeeeEEEEechhhhccceeeeecccccCCcHHHHHHHHHHHHHHHHHHHh-cC
Confidence            3577888899998765 4578899997654211                       0111 2245678888888876 55


Q ss_pred             ceeeeeeeEeCCeEEEEEeccCcccHH-HHHHhcCCCCHHHHHHHHHHHHHHHHhh
Q psy8006          67 IVQLHQVFESSHDMILLLELLTSAVDS-KIRESFGSKSESGVQNCLEPSISVFSSL  121 (126)
Q Consensus        67 iv~l~~~~~~~~~~~lv~e~~~~~~L~-~~~~~~~~~~~~~~~~~~~qi~~~l~~l  121 (126)
                      |+...-+...  ...|||+|+...... -.++ +-.++...+..+-.|++.-+.-|
T Consensus       228 IP~PePIlLk--~hVLVM~FlGrdgw~aPkLK-d~~ls~~ka~~~Y~~~v~~MR~l  280 (520)
T KOG2270|consen  228 IPCPEPILLK--NHVLVMEFLGRDGWAAPKLK-DASLSTSKARELYQQCVRIMRRL  280 (520)
T ss_pred             CCCCCceeee--cceEeeeeccCCCCcCcccc-cccCChHHHHHHHHHHHHHHHHH
Confidence            4433222222  246899999865442 2233 23566666766666666655544

>cd05153 HomoserineK_II Homoserine Kinase, type II

Probab=93.51  E-value=0.83  Score=29.97  Aligned_cols=99  Identities=13%  Similarity=0.027  Sum_probs=58.5

Q ss_pred             ccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCC-CCceeeeee------eEeCCe
Q psy8006           7 IISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCN-SRIVQLHQV------FESSHD   79 (126)
Q Consensus         7 ~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~-~~iv~l~~~------~~~~~~   79 (126)
                      +...+.+..|....+|.....  +..+++|.....     .......|+.++..+..+ -.++++...      ...++.
T Consensus        16 ~~~i~~i~~G~~n~~y~v~~~--~~~~vLr~~~~~-----~~~~~~~e~~~l~~L~~~g~~vp~~i~~~~g~~~~~~~~~   88 (296)
T cd05153          16 LLSFEGISAGIENTNYFVTTD--SGRYVLTLFEKV-----SAEELPFFLALLDHLAERGLPVPRPIADRDGEYLSELAGK   88 (296)
T ss_pred             hhheecccCccccceEEEEeC--CCcEEEEEcCCC-----ChHhccHHHHHHHHHHHCCCCCCccccCCCCcEeeeeCCc
Confidence            344567777877788887653  346888877541     122466677777777541 123333221      123456


Q ss_pred             EEEEEeccCcccHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhhc
Q psy8006          80 MILLLELLTSAVDSKIRESFGSKSESGVQNCLEPSISVFSSLSK  123 (126)
Q Consensus        80 ~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~l~~  123 (126)
                      .++++++++|..+..       .+.    ....++.++++-||+
T Consensus        89 ~~~l~~~i~G~~~~~-------~~~----~~~~~lg~~La~lH~  121 (296)
T cd05153          89 PAALVEFLAGEHLTR-------PTA----AHCRQIGEALARLHL  121 (296)
T ss_pred             eEEEEEeCCCCCCCC-------CCH----HHHHHHHHHHHHHHH
Confidence            789999999986532       222    244566777777775

Homoserine kinase is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of unusual homoserine kinases, from a subset of bacteria, which have a PK fold. These proteins do not bear any similarity to the GHMP family homoserine kinases present in most bacteria and eukaryotes. Homoserine kinase catalyzes the transfer of the gamma-phosphoryl group from ATP to L-homoserine producing L-homoserine phosphate, an intermediate in the production of the amino acids threonine, methionine, and isoleucine.

>COG1718 RIO1 Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms / Cell division and chromosome partitioning]

Probab=93.31  E-value=1.5  Score=28.71  Aligned_cols=107  Identities=16%  Similarity=0.105  Sum_probs=61.3

Q ss_pred             eccCccceeEEEEEEccCCcEEEEEEeecCCCCch----------------------hHHHHHHHHHHHHHhcCCCCcee
Q psy8006          12 INDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTD----------------------LKAEILHEVAVLEACRCNSRIVQ   69 (126)
Q Consensus        12 ~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~----------------------~~~~~~~e~~~l~~~~~~~~iv~   69 (126)
                      .|++|.-+.||.|.. ..+..+|+|+.......-.                      ...+..+|+.-|.++.. .+ |+
T Consensus        55 ~istGKEA~Vy~a~~-~~~~~~avKiyr~~t~~fk~~~~Yi~gd~Rf~~~~~~rr~lv~~W~~kEf~NL~R~~e-AG-Vr  131 (268)
T COG1718          55 CISTGKEANVYLAET-GDGRYVAVKIYRTSTSEFKRIRRYIQGDPRFRNSRSNRRKLVFAWARKEFRNLKRAYE-AG-VR  131 (268)
T ss_pred             eecCCcceEEEeecc-CCCceEEEEEEehhhhhhhhHHHHHhcChhhhcCCCCHHHHHHHHHHHHHHHHHHHHH-cC-CC
Confidence            678899999999976 4578899998876432110                      12245677777777654 33 22


Q ss_pred             eeeeeEeCCeEEEEEeccCcccH-HHHHHhcCCCCHHHHHHHHHHHHHHHHhhhc
Q psy8006          70 LHQVFESSHDMILLLELLTSAVD-SKIRESFGSKSESGVQNCLEPSISVFSSLSK  123 (126)
Q Consensus        70 l~~~~~~~~~~~lv~e~~~~~~L-~~~~~~~~~~~~~~~~~~~~qi~~~l~~l~~  123 (126)
                      +..-+. -..-.|+|||++.... .-.++. -.+...++..+..+++..+.-|-+
T Consensus       132 vP~Pi~-~~~nVLvMEfIg~~g~pAP~LkD-v~~e~~e~~~~~~~~v~~~~~l~~  184 (268)
T COG1718         132 VPEPIA-FRNNVLVMEFIGDDGLPAPRLKD-VPLELEEAEGLYEDVVEYMRRLYK  184 (268)
T ss_pred             CCCcee-ecCCeEEEEeccCCCCCCCCccc-CCcCchhHHHHHHHHHHHHHHHHH
Confidence            211111 1124589999876522 122222 223333566677777776665543

>cd05156 ChoK_euk Choline Kinase (ChoK) in eukaryotes

Probab=93.19  E-value=1.5  Score=28.87  Aligned_cols=99  Identities=9%  Similarity=-0.010  Sum_probs=57.5

Q ss_pred             eeccCccceeEEEEEEcc------CCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeEEEEE
Q psy8006          11 IINDMGKYATVRRCRDRK------NGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLL   84 (126)
Q Consensus        11 ~~lg~g~~~~v~~~~~~~------~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~~lv~   84 (126)
                      +.+..|....+|+.....      .+..+++|........   .....+|..++..+....-.++++..+. +   ..|+
T Consensus         4 ~~l~gGltN~~y~v~~~~~~~~~~~~~~~vlRi~~~~~~~---~~~r~~E~~~~~~l~~~g~~P~~~~~~~-~---~~v~   76 (302)
T cd05156           4 SKISGGLTNAVYKVSLPDEDALSDEPRKVLLRVYGQSVEL---LIDRERELVVFARLSERNLGPKLYGIFP-N---GRIE   76 (302)
T ss_pred             EEecCcccceeEEEEcCCcccccCCCCeEEEEEecCCCcc---eechHHHHHHHHHHHhCCCCCceEEEeC-C---Cchh
Confidence            445566666788776432      2567888886543211   1235677777877765222234444432 2   2578


Q ss_pred             eccCcccHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhhcc
Q psy8006          85 ELLTSAVDSKIRESFGSKSESGVQNCLEPSISVFSSLSKF  124 (126)
Q Consensus        85 e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~l~~~  124 (126)
                      +|++|.++....     +..   ...+.+++..++.||+.
T Consensus        77 e~i~G~~l~~~~-----~~~---~~~~~~ia~~L~~lH~~  108 (302)
T cd05156          77 EFIPSRTLTTEE-----LRD---PDISAEIARRMAKLHSI  108 (302)
T ss_pred             heeCCCcCCHhH-----cCC---cHHHHHHHHHHHHhhCC
Confidence            888887654211     111   13566788888888875

The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC) and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. ChoK plays an important role in cell signaling pathways and the regulation of cell growth. Along with PCho, it is involved in malignant transformation through Ras oncogenes in various human cancer

>TIGR02721 ycfN_thiK thiamine kinase

Probab=92.74  E-value=1.2  Score=28.65  Aligned_cols=95  Identities=15%  Similarity=0.051  Sum_probs=53.4

Q ss_pred             ccCccceeEEEEEEccCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCc-eeeeeeeEeCCeEEEEEeccCccc
Q psy8006          13 NDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRI-VQLHQVFESSHDMILLLELLTSAV   91 (126)
Q Consensus        13 lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i-v~l~~~~~~~~~~~lv~e~~~~~~   91 (126)
                      +..|....+|+..  ..+..+.+|........-.  ....+|..++..+.. ..+ ++++...  .  -++|+||++|..
T Consensus         4 ~~~G~tn~~y~~~--~~~~~~vlR~~~~~~~~~~--~~r~~E~~~l~~l~~-~g~~P~~i~~~--~--~~~v~e~i~G~~   74 (256)
T TIGR02721         4 LSGGLTNRSWRIE--HPGISFVWRPQSPVCKALG--VDRQREYQILQALSA-LGLAPKPILVN--E--HWLLVEWLEGEV   74 (256)
T ss_pred             CCCcCcCCeEEEE--eCCccEEEeeCCccccccc--CcHHHHHHHHHHHHh-cCCCCceEEEe--C--CEEEEEeccCcc
Confidence            4457777788775  3456788886543321100  124567788888765 223 2333222  2  368999999876


Q ss_pred             HHHHHHhcCCCCHHHHHHHHHHHHHHHHhhhcc
Q psy8006          92 DSKIRESFGSKSESGVQNCLEPSISVFSSLSKF  124 (126)
Q Consensus        92 L~~~~~~~~~~~~~~~~~~~~qi~~~l~~l~~~  124 (126)
                      +..-     .+..   .....++++.+..||..
T Consensus        75 ~~~~-----~~~~---~~~~~~la~~l~~lH~~   99 (256)
T TIGR02721        75 ITLD-----QFVA---LDLLLELAALLHQLHSQ   99 (256)
T ss_pred             cccc-----cccC---chhHHHHHHHHHHHhCC
Confidence            5321     0111   12456777778888865

Members of this family are the ycfN gene product of Escherichia coli, now identified as the salvage enzyme thiamine kinase (thiK), and additional proteobacterial homologs taken to be orthologs with equivalent function.

>COG3001 Uncharacterized protein conserved in bacteria [Function unknown]

Probab=90.09  E-value=1.2  Score=29.00  Aligned_cols=69  Identities=19%  Similarity=0.187  Sum_probs=42.4

Q ss_pred             eeEEEEEEccCCc-EEEEEEeecCCCCchhHHHHHHHHHHHHHhcC-C-CCceeeeeeeEeCCeEEEEEeccCcccH
Q psy8006          19 ATVRRCRDRKNGT-QYAAKFLRKKRRSTDLKAEILHEVAVLEACRC-N-SRIVQLHQVFESSHDMILLLELLTSAVD   92 (126)
Q Consensus        19 ~~v~~~~~~~~~~-~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~-~-~~iv~l~~~~~~~~~~~lv~e~~~~~~L   92 (126)
                      |.|..|....+|. ++-+|+-....     ..-+..|+.-+..+.. + -.+.+++..-...++.|+|+||++.+.+
T Consensus        27 G~inea~~v~dg~~~~FvK~n~~~~-----~~~f~AEa~gL~~la~s~ti~VP~vi~~G~~~~~sylVle~L~~~~~   98 (286)
T COG3001          27 GDINEAWRLRDGTDPFFVKCNQREQ-----LSMFTAEADGLELLARSNTITVPKVIAVGASRDHSYLVLEYLPTGPL   98 (286)
T ss_pred             ccccceeEeecCCcceEEEecchhh-----HHHHHHHHHHHHHHHhcCCccccceEEecCCCCeeEEEEeeccCCCC
Confidence            4455555544544 57777665432     2246667665555433 0 3455666666778899999999987644

>COG3173 Predicted aminoglycoside phosphotransferase [General function prediction only]

Probab=90.02  E-value=4.4  Score=27.45  Aligned_cols=89  Identities=11%  Similarity=0.083  Sum_probs=51.3

Q ss_pred             CcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCC-CCceeeeeeeEeCC--eEEEEEeccCcccHHHHHHhcCCCCHHH
Q psy8006          30 GTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCN-SRIVQLHQVFESSH--DMILLLELLTSAVDSKIRESFGSKSESG  106 (126)
Q Consensus        30 ~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~-~~iv~l~~~~~~~~--~~~lv~e~~~~~~L~~~~~~~~~~~~~~  106 (126)
                      +..+.++ ..+............+|..++..+... ..+...++.+..+.  ..|.||++.+|.....-.     ++...
T Consensus        48 ~~~~vlR-~P~~~~~~~~~~~~~re~~~i~~l~~~~vP~p~~~~~~~~~~~g~pf~v~~~veGe~~~~~~-----~~~~~  121 (321)
T COG3173          48 GQKYVLR-KPPRGDPVESAHDEKREYRVIAALLDVDVPVPRAFGLCGEGYLGTPFYVMEWVEGEVVWSAL-----PPESL  121 (321)
T ss_pred             CceEEEe-cCCccccchhhhHHHhHHHHHHHhcCCCCCCcccccccccCCCCCceEEEEEecceeccCcC-----Ccccc
Confidence            6677888 332222223344577888888887541 22334455554444  779999999997432211     11222


Q ss_pred             HHHHH-HHHHHHHHhhhcc
Q psy8006         107 VQNCL-EPSISVFSSLSKF  124 (126)
Q Consensus       107 ~~~~~-~qi~~~l~~l~~~  124 (126)
                      ...+. -.+...|+.||+-
T Consensus       122 ~~~~~~~~l~~~La~LH~i  140 (321)
T COG3173         122 GRQFALDALADFLAELHSI  140 (321)
T ss_pred             hHHHHHHHHHHHHHHHhCC
Confidence            22333 3788999999974

>PLN02756 S-methyl-5-thioribose kinase

Probab=89.63  E-value=5.6  Score=28.04  Aligned_cols=108  Identities=9%  Similarity=-0.039  Sum_probs=62.7

Q ss_pred             cceeeccCccceeEEEEEEccCCcEEEEEEeecCCC--C---chhHHHHHHHHHHHHHhcC-C-CCceeeeeeeEeCCeE
Q psy8006           8 ISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRR--S---TDLKAEILHEVAVLEACRC-N-SRIVQLHQVFESSHDM   80 (126)
Q Consensus         8 ~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~--~---~~~~~~~~~e~~~l~~~~~-~-~~iv~l~~~~~~~~~~   80 (126)
                      ...+.+|.|....||+..+.  +..+.||.-.+...  +   +....+-..|...|..... . ..+++++.+..  +..
T Consensus        35 l~~~eiggGn~N~VyrV~~~--~~svVVKqa~p~~r~vga~wpl~~~R~~~Ea~aL~~~~~~~p~~VPkVy~~de--d~~  110 (418)
T PLN02756         35 LKIKEVGDGNLNFVYIVVSS--SGSFVIKQALPYIRCIGESWPMTKERAYFEATALREHGRLCPDHVPEVYHFDR--TMA  110 (418)
T ss_pred             ceEEEcCCCceeeEEEEEcC--CccEEEEeCCccccCCCccccCCccHHHHHHHHHHHhhhcCCCCCCeEEEECC--CCC
Confidence            45667888988889987763  34588887663322  1   1122344556666665542 1 35566665554  446


Q ss_pred             EEEEeccCcc--cHHHHHHhcCCCCHHHHHHHHHHHHHHHHh
Q psy8006          81 ILLLELLTSA--VDSKIRESFGSKSESGVQNCLEPSISVFSS  120 (126)
Q Consensus        81 ~lv~e~~~~~--~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~  120 (126)
                      .++||+++++  .+.+-+-. +...+..+..+...++.++-+
T Consensus       111 vlvME~L~~~~~ilr~~Ll~-G~~~p~~a~~ig~~la~tLf~  151 (418)
T PLN02756        111 LIGMRYLEPPHIILRKGLIA-GIEYPLLAEHMSDYMAKTLFF  151 (418)
T ss_pred             EEEEeecCCcceehhhhhcc-CCCCHHHHHHHHHHHHHHHhh
Confidence            7889999873  34433332 222345566666666666543

>KOG0606|consensus

Probab=88.96  E-value=0.039  Score=42.26  Aligned_cols=115  Identities=12%  Similarity=0.055  Sum_probs=70.8

Q ss_pred             ceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCch-hHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeEEEEEecc
Q psy8006           9 SSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTD-LKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLLELL   87 (126)
Q Consensus         9 ~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~-~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~~lv~e~~   87 (126)
                      ..+.+.+|+++.++.+....++...+++.......-.. ..+...++-.+.-...+ |-++.....+......+|+++++
T Consensus       808 i~~p~qS~sp~ss~p~~pa~sgh~~~~~v~~~ap~i~~~~~~s~r~~s~~~i~p~~-P~v~~~~~s~~~rsP~~L~~~~~  886 (1205)
T KOG0606|consen  808 ITKPSQSGSPSSSFPASPAGSGHTRPSKVHGLAPKIRTNDYESIRSKSNILITPRS-PAVVRSFPSFPCRSPLPLVGHYL  886 (1205)
T ss_pred             ecccccCCCCcccccCCccccccccchhhhccchhhccccccccCCccCccccCCC-CceecccCCCCCCCCcchhhHHh
Confidence            34466778888888777666664444444333211000 01111111111212222 55565544444556789999999


Q ss_pred             CcccHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhhcc
Q psy8006          88 TSAVDSKIRESFGSKSESGVQNCLEPSISVFSSLSKF  124 (126)
Q Consensus        88 ~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~l~~~  124 (126)
                      .++++...+..-++.++.-++.+...+..+.++||..
T Consensus       887 ~~~~~~Skl~~~~~~saepaRs~i~~~vqs~e~L~s~  923 (1205)
T KOG0606|consen  887 NGGDLPSKLHNSGCLSAEPARSPILERVQSLESLHSS  923 (1205)
T ss_pred             ccCCchhhhhcCCCcccccccchhHHHHhhhhccccc
Confidence            9999988888777778777888888889999998854

>KOG1035|consensus

Probab=88.34  E-value=1.9  Score=34.27  Aligned_cols=74  Identities=11%  Similarity=-0.014  Sum_probs=57.2

Q ss_pred             HHHHHHHHHHHhcCCCCceeeeeeeEeCCe----EEEEEeccCcccHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhhcc
Q psy8006          50 EILHEVAVLEACRCNSRIVQLHQVFESSHD----MILLLELLTSAVDSKIRESFGSKSESGVQNCLEPSISVFSSLSKF  124 (126)
Q Consensus        50 ~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~----~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~l~~~  124 (126)
                      ....|...+.++.| +|++.++.+-.....    ..+.-+++.+.++...++.-...+...++.+..+++.++.++|+.
T Consensus       228 ~~E~e~~~l~k~~~-~n~~~~~~~~le~~~~g~~~~v~~~~~s~~~~~~~~q~v~~i~~~~~r~~~~~~~~GL~~~h~~  305 (1351)
T KOG1035|consen  228 TTEIELESLSKIAH-DNLGGYFVYGLERLFRGIVLDVLQEICSKVELRSLLQSVGSIPLETLRILHQKLLEGLAYLHSL  305 (1351)
T ss_pred             HHHHHHHHHHhhcc-ccccceeEEeehhhcchHHHHHHHhhcCccchHHHHhhccccCHHHHHHHHHHHhhhHHHHHHh
Confidence            35567778888888 999988776543222    234456777777888888878899999999999999999999974

>TIGR00938 thrB_alt homoserine kinase, Neisseria type

Probab=85.48  E-value=8.5  Score=25.55  Aligned_cols=99  Identities=12%  Similarity=0.045  Sum_probs=54.2

Q ss_pred             cceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCC-CCceeeeee------eEeCCeE
Q psy8006           8 ISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCN-SRIVQLHQV------FESSHDM   80 (126)
Q Consensus         8 ~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~-~~iv~l~~~------~~~~~~~   80 (126)
                      ...+.++.|....+|..... .+ .+.+|.......    ......|..++..+..+ -.++++...      ....+..
T Consensus        25 ~~i~~~~~G~~n~~y~v~t~-~~-~~vLK~~~~~~~----~~~i~~e~~~l~~L~~~g~pvp~~i~t~~g~~~~~~~g~~   98 (307)
T TIGR00938        25 LSLKGIAEGVENSNYLLTTD-VG-RYILTLYEKRVK----AEELPFFLALTTHLAARGLPVPKPVKSRDGRQLSTLAGKP   98 (307)
T ss_pred             eeccccCCccccceEEEEeC-CC-cEEEEEecCCCC----HHHHHHHHHHHHHHHHCCCCCCccccCCCCCeehhcCCeE
Confidence            34556677766778887643 33 577887654221    12345666777666431 113333221      1124567


Q ss_pred             EEEEeccCcccHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhhc
Q psy8006          81 ILLLELLTSAVDSKIRESFGSKSESGVQNCLEPSISVFSSLSK  123 (126)
Q Consensus        81 ~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~l~~  123 (126)
                      ++++++++|..+..       .+..    .+.++..+++.||+
T Consensus        99 ~~l~e~i~G~~~~~-------~~~~----~~~~~G~~LA~lH~  130 (307)
T TIGR00938        99 ACLVEFLQGLSVGR-------PTAM----HCRPVGEVLAWMHL  130 (307)
T ss_pred             EEEEEeCCCCCCCC-------CCHH----HHHHHHHHHHHHHh
Confidence            89999999875421       1121    23556666666664

Homoserine kinase is required in the biosynthesis of threonine from aspartate.The member of this family from Pseudomonas aeruginosa was shown by direct assay and complementation to act specifically as a homoserine kinase.

>PF04655 APH_6_hur: Aminoglycoside/hydroxyurea antibiotic resistance kinase; InterPro: IPR006748 The aminoglycosides are a large group of biologically active bacterial secondary metabolites, best known for their antibiotic properties []

Probab=84.74  E-value=7.6  Score=25.36  Aligned_cols=79  Identities=20%  Similarity=0.105  Sum_probs=48.8

Q ss_pred             eeeccCccceeEEEEEEccCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeEEEEEeccCc
Q psy8006          10 SIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLLELLTS   89 (126)
Q Consensus        10 ~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~~lv~e~~~~   89 (126)
                      ...+..|..+.|+.+.. .+|.+.++|...+..-...   +. .....|...+. ...|++++.-.  ..-.+++|.+.+
T Consensus         7 ~~~~~~g~~s~V~pv~~-~dG~~avLKl~~p~~~~~~---E~-~g~~~L~~w~G-~GaVrll~~d~--~~~AlLLErl~~   78 (253)
T PF04655_consen    7 DGPPAHGSSSLVVPVRR-ADGTPAVLKLAPPHAEAEH---EA-RGEAALRWWNG-RGAVRLLAADP--ERGALLLERLDP   78 (253)
T ss_pred             CCCCCCCcceEEEEEEc-CCCCeEEEEecCCcccchh---hh-hHHhHhheeCC-CCceeeecccc--ccchhhhhhccC
Confidence            34456688888888864 5688999998875431111   11 11245777777 77888876552  345678888844


Q ss_pred             -ccHHHHH
Q psy8006          90 -AVDSKIR   96 (126)
Q Consensus        90 -~~L~~~~   96 (126)
                       .+|.+..
T Consensus        79 g~~L~~~~   86 (253)
T PF04655_consen   79 GRSLASLP   86 (253)
T ss_pred             CCchhhcc
Confidence             4565443

Aminoglycoside phosphotransferases achieve inactivation of these enzymes by phosphorylation, utilising ATP. Likewise, hydroxyurea is inactivated by phosphorylation of the hydroxy group in the hydroxylamine moiety.; GO: 0016773 phosphotransferase activity, alcohol group as acceptor, 0006468 protein phosphorylation, 0019748 secondary metabolic process

>COG3231 Aph Aminoglycoside phosphotransferase [Translation, ribosomal structure and biogenesis]

Probab=83.94  E-value=9.5  Score=24.87  Aligned_cols=71  Identities=15%  Similarity=0.086  Sum_probs=43.1

Q ss_pred             HHHHHHHHHHHHhcCC-CCceeeeeeeEeCCeEEEEEeccCcccHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhhccC
Q psy8006          49 AEILHEVAVLEACRCN-SRIVQLHQVFESSHDMILLLELLTSAVDSKIRESFGSKSESGVQNCLEPSISVFSSLSKFE  125 (126)
Q Consensus        49 ~~~~~e~~~l~~~~~~-~~iv~l~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~l~~~~  125 (126)
                      ..+..|.+.+.=+... -.+.++.+.....+.-|++|+-++|-++...-.   .++...   .+.-+++++..||++.
T Consensus        57 a~L~~Ea~RlrWla~~~l~~P~V~~~~~~~~~~wLl~salpG~~~s~~~~---~~~p~r---~v~~la~aLR~LH~l~  128 (266)
T COG3231          57 AELEGEAARLRWLAGQGLGCPRVLGLEDDADQAWLLMSALPGEDASHPRY---ALDPKR---AVPLLAEALRRLHELP  128 (266)
T ss_pred             hhhhhHHHHHHHhcccCCCCCceEeeccCcchhHHhhhhcCCCcccchhh---cCCHHH---HHHHHHHHHHHHhcCC
Confidence            3577777766544320 122333444455778899999888876532211   244444   4455889999999864

>TIGR01767 MTRK 5-methylthioribose kinase

Probab=82.18  E-value=14  Score=25.64  Aligned_cols=104  Identities=12%  Similarity=-0.068  Sum_probs=58.2

Q ss_pred             eccCccceeEEEEEEccCCcEEEEEEeecCCC-----CchhHHHHHHHHHHHHHhcC-CC-CceeeeeeeEeCCeEEEEE
Q psy8006          12 INDMGKYATVRRCRDRKNGTQYAAKFLRKKRR-----STDLKAEILHEVAVLEACRC-NS-RIVQLHQVFESSHDMILLL   84 (126)
Q Consensus        12 ~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~-----~~~~~~~~~~e~~~l~~~~~-~~-~iv~l~~~~~~~~~~~lv~   84 (126)
                      .+|.|....||++.+...++.++||.-.+...     ++-...+...|...|..... .| .+++++.  .+++...++|
T Consensus         2 EigdGnlN~VfrV~~~~g~~svIVKQAlp~vRv~g~~wpl~~~R~~~E~~~L~~~~~~~P~~vP~vy~--~D~e~~~~vM   79 (370)
T TIGR01767         2 EVGDGNLNLVFHVYDQEGDRAAIVKQALPYVRVVGESWPLTLDRARIESSALIRQGEHVPHLVPRIFH--FDTEMAVTVM   79 (370)
T ss_pred             cCCCCceEEEEEEEcCCCCeeEEEEEcCHHHhhcCCCCCCCccHHHHHHHHHHHhhccCccccCeEEE--EccccceehH
Confidence            46889888999998754335788885543211     12223356678888876543 24 3333332  2344456899


Q ss_pred             eccCccc-HHHHHHhcCCCCHHHHHHHHHHHHHHH
Q psy8006          85 ELLTSAV-DSKIRESFGSKSESGVQNCLEPSISVF  118 (126)
Q Consensus        85 e~~~~~~-L~~~~~~~~~~~~~~~~~~~~qi~~~l  118 (126)
                      |+++... +...+-. +...+..+..+..-+...+
T Consensus        80 EdL~~~~ilR~~Li~-g~~~p~~A~~iG~~La~tl  113 (370)
T TIGR01767        80 EDLSHHKIARKGLIE-GENYPHLARHIGEFLAKTL  113 (370)
T ss_pred             hhCccchHHHHHHHc-CCCChHHHHHHHHHHHHHH
Confidence            9997654 3444433 2333445555554444444

This enzyme is involved in the methionine salvage pathway in certain bacteria.

>PTZ00384 choline kinase; Provisional

Probab=82.08  E-value=13  Score=25.90  Aligned_cols=101  Identities=10%  Similarity=-0.066  Sum_probs=53.3

Q ss_pred             ceeeccCccceeEEEEEEccC-CcE-----EEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeEEE
Q psy8006           9 SSIINDMGKYATVRRCRDRKN-GTQ-----YAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMIL   82 (126)
Q Consensus         9 ~~~~lg~g~~~~v~~~~~~~~-~~~-----~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~~l   82 (126)
                      .-+.+..|-...+|++..... +..     |.++.. ..  .....-.-.+|..++..+..+..-.++++.+.    -++
T Consensus        54 ~i~~l~gGLTN~l~~v~~~~~~~~~~~~k~Vl~R~~-g~--~~~l~IdR~~E~~i~~~Ls~~glgP~l~~~f~----~g~  126 (383)
T PTZ00384         54 EIKKMNNGITNQVYQATLVDGDKDRYPIKSVCIKKS-ST--YNSLVIDNDLQYNIAKLLGDNNFGPKIIGRFG----DFT  126 (383)
T ss_pred             EEEEeCCcccceEEEEEecCCCCCccccceEEEEec-cC--CCceEeccHHHHHHHHHHHhCCCCCeEEEecC----CEE
Confidence            344555677888888864322 122     333321 11  11111123467888888876344455565553    258


Q ss_pred             EEeccCcccHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhhcc
Q psy8006          83 LLELLTSAVDSKIRESFGSKSESGVQNCLEPSISVFSSLSKF  124 (126)
Q Consensus        83 v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~l~~~  124 (126)
                      +.||+++.++..--     +..   ..+..+++..++-||..
T Consensus       127 l~efIeGr~l~~~d-----l~~---p~~~~~IA~~La~lH~~  160 (383)
T PTZ00384        127 IQEWVEGNTMGIDS-----LQN---LSVLTGIASSLAKFHKR  160 (383)
T ss_pred             EEEEeccccCChhH-----hcC---HHHHHHHHHHHHHHhcc
Confidence            89999887653210     111   12455677777777764

>KOG1033|consensus

Probab=81.98  E-value=0.66  Score=33.10  Aligned_cols=42  Identities=7%  Similarity=-0.030  Sum_probs=35.2

Q ss_pred             eEEEEEeccCcccHHHHHHhcC---CCCHHHHHHHHHHHHHHHHh
Q psy8006          79 DMILLLELLTSAVDSKIRESFG---SKSESGVQNCLEPSISVFSS  120 (126)
Q Consensus        79 ~~~lv~e~~~~~~L~~~~~~~~---~~~~~~~~~~~~qi~~~l~~  120 (126)
                      ++||.|++|...+|.+++.++.   ..+......++.|+..+++|
T Consensus       330 ~lyI~Mn~c~~~tledWl~rr~~~e~~s~s~~~~~~~q~~~~~~y  374 (516)
T KOG1033|consen  330 YLYIQMNLCEKETLEDWLRRRRTGEERSLSLMLDIFKQIAPAVEY  374 (516)
T ss_pred             chhhhhhhhhhhhHHHHhhCCCcccccchhHHHHHHHhhccchhh
Confidence            5899999999999999997543   45667788999999998876

>PF06176 WaaY: Lipopolysaccharide core biosynthesis protein (WaaY); InterPro: IPR009330 This family consists of several bacterial lipopolysaccharide core biosynthesis proteins (WaaY or RfaY)

Probab=81.35  E-value=12  Score=24.16  Aligned_cols=41  Identities=20%  Similarity=0.270  Sum_probs=27.2

Q ss_pred             CeEEEEEeccCcccHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          78 HDMILLLELLTSAVDSKIRESFGSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        78 ~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      ...+++|||++|-.|.++..    +++.    +...+.+++.-||+.|+
T Consensus       116 ~~~~ll~EYIeG~~l~d~~~----i~e~----~~~ki~~~ikqlH~~G~  156 (229)
T PF06176_consen  116 SSYVLLMEYIEGVELNDIED----IDED----LAEKIVEAIKQLHKHGF  156 (229)
T ss_pred             eEEEEEEEEecCeecccchh----cCHH----HHHHHHHHHHHHHHcCC
Confidence            34668999999987755432    2332    33456677888888764

The waaY, waaQ, and waaP genes are located in the central operon of the waa (formerly rfa) locus on the chromosome of Escherichia coli. This locus contains genes whose products are involved in the assembly of the core region of the lipopolysaccharide molecule. WaaY is the enzyme that phosphorylates HepII in this system [].; GO: 0009244 lipopolysaccharide core region biosynthetic process

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	126
3lm0_A	327	Crystal Structure Of Human SerineTHREONINE KINASE 1		5e-18
3bhy_A	283	Crystal Structure Of Human Death Associated Protein		2e-11
1yrp_A	278	Catalytic Domain Of Human Zip Kinase Phosphorylated		2e-11
3dfc_B	295	Crystal Structure Of A Glycine-Rich Loop Mutant Of		3e-11
2j90_A	304	Crystal Structure Of Human Zip Kinase In Complex Wi		5e-11
2y0a_A	326	Structure Of Dapk1 Construct Residues 1-304 Length		7e-11
2xzs_A	312	Death Associated Protein Kinase 1 Residues 1-312 Le		7e-11
1p4f_A	293	Death Associated Protein Kinase Catalytic Domain Wi		7e-11
3f5u_A	295	Crystal Structure Of The Death Associated Protein K		7e-11
1ig1_A	294	1.8a X-Ray Structure Of Ternary Complex Of A Cataly		7e-11
1wvw_A	278	Crystal Structures Of Kinase Domain Of Dap Kinase I		7e-11
2yak_A	285	Structure Of Death-Associated Protein Kinase 1 (Dap		7e-11
2w4k_A	302	X-Ray Structure Of A Dap-Kinase 2-302 Length = 302		8e-11
2w4j_A	277	X-Ray Structure Of A Dap-Kinase 2-277 Length = 277		8e-11
2x0g_A	334	X-ray Structure Of A Dap-kinase Calmodulin Complex		8e-11
2xuu_A	334	Crystal Structure Of A Dap-Kinase 1 Mutant Length =		9e-11
3gu4_A	295	Crystal Structure Of Dapkq23v-Amppnp Length = 295		2e-10
3gu8_A	295	Crystal Structure Of Dapkl93g With N6-Cyclopentylad		5e-10
2ya9_A	361	Crystal Structure Of The Autoinhibited Form Of Mous		2e-09
1zws_A	288	Crystal Structure Of The Catalytic Domain Of Human		2e-09
2a2a_A	321	High-resolution Crystallographic Analysis Of The Au		3e-09
1wmk_A	321	Human Death-Associated Kinase Drp-1, Mutant S308d D		3e-09
2a27_A	321	Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal		3e-09
1z9x_A	321	Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal		3e-09
2x4f_A	373	The Crystal Structure Of The Human Myosin Light Cha		9e-06
3kn5_A	325	Crystal Structure Of The C-Terminal Kinase Domain O		5e-05
3lij_A	494	Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820)		1e-04
3uto_A	573	Twitchin Kinase Region From C.Elegans (Fn31-Nl-Kin-		2e-04
1koa_A	491	Twitchin Kinase Fragment (C.Elegans), Autoregulated		2e-04
1kob_A	387	Twitchin Kinase Fragment (Aplysia), Autoregulated P		3e-04
2hw6_A	307	Crystal Structure Of Mnk1 Catalytic Domain Length =		4e-04
1tki_A	321	Autoinhibited Serine Kinase Domain Of The Giant Mus		7e-04

>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B (STK17B) Length = 327

Iteration: 1
 Score = 85.9 bits (211), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 36/70 (51%), Positives = 54/70 (77%)
Query: 16  GKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFE 75
           GK+A VR+C  +  G +YAAKFL+K+RR  D +AEILHE+AVLE  +   R++ LH+V+E
Sbjct: 40  GKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVINLHEVYE 99
Query: 76  SSHDMILLLE 85
           ++ ++IL+LE
Sbjct: 100 NTSEIILILE 109

>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase 3 (Dapk3) In Complex With A Beta-Carboline Ligand Length = 283

Iteration: 1
 Score = 64.3 bits (155), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 31/79 (39%), Positives = 51/79 (64%), Gaps = 5/79 (6%)
Query: 16 GKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKA----EILHEVAVLEACRCNSRIVQLH 71
          G++A VR+CR +  G +YAAKF++K+R S+  +     EI  EV +L   R +  I+ LH
Sbjct: 16 GQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIR-HPNIITLH 74
Query: 72 QVFESSHDMILLLELLTSA 90
           +FE+  D++L+LEL++  
Sbjct: 75 DIFENKTDVVLILELVSGG 93

>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At Thr265 Length = 278

Iteration: 1
 Score = 64.3 bits (155), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 31/79 (39%), Positives = 51/79 (64%), Gaps = 5/79 (6%)
Query: 16  GKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKA----EILHEVAVLEACRCNSRIVQLH 71
           G++A VR+CR +  G +YAAKF++K+R S+  +     EI  EV +L   R +  I+ LH
Sbjct: 23  GQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIR-HPNIITLH 81
Query: 72  QVFESSHDMILLLELLTSA 90
            +FE+  D++L+LEL++  
Sbjct: 82  DIFENKTDVVLILELVSGG 100

>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The Death Associated Protein Kinase Catalytic Domain With Amppnp Length = 295

Iteration: 1
 Score = 63.5 bits (153), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 29/79 (36%), Positives = 53/79 (67%), Gaps = 5/79 (6%)
Query: 16 GKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKA----EILHEVAVLEACRCNSRIVQLH 71
          GK+A V++CR++  G QYAAKF++K+R  +  +     +I  EV++L+  + +  ++ LH
Sbjct: 22 GKFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ-HPNVITLH 80
Query: 72 QVFESSHDMILLLELLTSA 90
          +V+E+  D+IL+LEL+   
Sbjct: 81 EVYENKTDVILILELVAGG 99

>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A Tetracyclic Pyridone Inhibitor (pyridone 6) Length = 304

Iteration: 1
 Score = 62.8 bits (151), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 31/79 (39%), Positives = 50/79 (63%), Gaps = 5/79 (6%)
Query: 16  GKYATVRRCRDRKNGTQYAAKFLRKKR----RSTDLKAEILHEVAVLEACRCNSRIVQLH 71
           G++A VR+CR +  G +YAAKF++K+R    R    + EI  EV +L   R +  I+ LH
Sbjct: 37  GQFAIVRKCRQKGTGKEYAAKFIKKRRLXSSRRGVSREEIEREVNILREIR-HPNIITLH 95
Query: 72  QVFESSHDMILLLELLTSA 90
            +FE+  D++L+LEL++  
Sbjct: 96  DIFENKTDVVLILELVSGG 114

>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304 Length = 326

Iteration: 1
 Score = 62.4 bits (150), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 28/79 (35%), Positives = 53/79 (67%), Gaps = 5/79 (6%)
Query: 16 GKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKA----EILHEVAVLEACRCNSRIVQLH 71
          G++A V++CR++  G QYAAKF++K+R  +  +     +I  EV++L+  + +  ++ LH
Sbjct: 22 GQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ-HPNVITLH 80
Query: 72 QVFESSHDMILLLELLTSA 90
          +V+E+  D+IL+LEL+   
Sbjct: 81 EVYENKTDVILILELVAGG 99

>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312 Length = 312

Iteration: 1
 Score = 62.4 bits (150), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 28/79 (35%), Positives = 53/79 (67%), Gaps = 5/79 (6%)
Query: 16 GKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKA----EILHEVAVLEACRCNSRIVQLH 71
          G++A V++CR++  G QYAAKF++K+R  +  +     +I  EV++L+  + +  ++ LH
Sbjct: 22 GQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ-HPNVITLH 80
Query: 72 QVFESSHDMILLLELLTSA 90
          +V+E+  D+IL+LEL+   
Sbjct: 81 EVYENKTDVILILELVAGG 99

>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With Bound Inhibitor Fragment Length = 293

Iteration: 1
 Score = 62.0 bits (149), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 28/79 (35%), Positives = 53/79 (67%), Gaps = 5/79 (6%)
Query: 16 GKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKA----EILHEVAVLEACRCNSRIVQLH 71
          G++A V++CR++  G QYAAKF++K+R  +  +     +I  EV++L+  + +  ++ LH
Sbjct: 21 GQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ-HPNVITLH 79
Query: 72 QVFESSHDMILLLELLTSA 90
          +V+E+  D+IL+LEL+   
Sbjct: 80 EVYENKTDVILILELVAGG 98

>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase In Complex With Amppnp And Mg2+ Length = 295

Iteration: 1
 Score = 62.0 bits (149), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 28/79 (35%), Positives = 53/79 (67%), Gaps = 5/79 (6%)
Query: 16 GKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKA----EILHEVAVLEACRCNSRIVQLH 71
          G++A V++CR++  G QYAAKF++K+R  +  +     +I  EV++L+  + +  ++ LH
Sbjct: 22 GQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ-HPNVITLH 80
Query: 72 QVFESSHDMILLLELLTSA 90
          +V+E+  D+IL+LEL+   
Sbjct: 81 EVYENKTDVILILELVAGG 99

>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic Domain Of Death-Associated Protein Kinase With Atp Analogue And Mn. Length = 294

Iteration: 1
 Score = 62.0 bits (149), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 28/79 (35%), Positives = 53/79 (67%), Gaps = 5/79 (6%)
Query: 16 GKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKA----EILHEVAVLEACRCNSRIVQLH 71
          G++A V++CR++  G QYAAKF++K+R  +  +     +I  EV++L+  + +  ++ LH
Sbjct: 21 GQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ-HPNVITLH 79
Query: 72 QVFESSHDMILLLELLTSA 90
          +V+E+  D+IL+LEL+   
Sbjct: 80 EVYENKTDVILILELVAGG 98

>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In Complex With Small Molecular Inhibitors Length = 278

Iteration: 1
 Score = 62.0 bits (149), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 28/79 (35%), Positives = 53/79 (67%), Gaps = 5/79 (6%)
Query: 16 GKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKA----EILHEVAVLEACRCNSRIVQLH 71
          G++A V++CR++  G QYAAKF++K+R  +  +     +I  EV++L+  + +  ++ LH
Sbjct: 22 GQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ-HPNVITLH 80
Query: 72 QVFESSHDMILLLELLTSA 90
          +V+E+  D+IL+LEL+   
Sbjct: 81 EVYENKTDVILILELVAGG 99

>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In Complex With A Ruthenium Octasporine Ligand (Osv) Length = 285

Iteration: 1
 Score = 62.0 bits (149), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 28/79 (35%), Positives = 53/79 (67%), Gaps = 5/79 (6%)
Query: 16 GKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKA----EILHEVAVLEACRCNSRIVQLH 71
          G++A V++CR++  G QYAAKF++K+R  +  +     +I  EV++L+  + +  ++ LH
Sbjct: 22 GQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ-HPNVITLH 80
Query: 72 QVFESSHDMILLLELLTSA 90
          +V+E+  D+IL+LEL+   
Sbjct: 81 EVYENKTDVILILELVAGG 99

>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302 Length = 302

Iteration: 1
 Score = 62.0 bits (149), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 28/79 (35%), Positives = 53/79 (67%), Gaps = 5/79 (6%)
Query: 16 GKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKA----EILHEVAVLEACRCNSRIVQLH 71
          G++A V++CR++  G QYAAKF++K+R  +  +     +I  EV++L+  + +  ++ LH
Sbjct: 22 GQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ-HPNVITLH 80
Query: 72 QVFESSHDMILLLELLTSA 90
          +V+E+  D+IL+LEL+   
Sbjct: 81 EVYENKTDVILILELVAGG 99

>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277 Length = 277

Iteration: 1
 Score = 62.0 bits (149), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 28/79 (35%), Positives = 53/79 (67%), Gaps = 5/79 (6%)
Query: 16 GKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKA----EILHEVAVLEACRCNSRIVQLH 71
          G++A V++CR++  G QYAAKF++K+R  +  +     +I  EV++L+  + +  ++ LH
Sbjct: 22 GQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ-HPNVITLH 80
Query: 72 QVFESSHDMILLLELLTSA 90
          +V+E+  D+IL+LEL+   
Sbjct: 81 EVYENKTDVILILELVAGG 99

>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex Length = 334

Iteration: 1
 Score = 62.0 bits (149), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 28/79 (35%), Positives = 53/79 (67%), Gaps = 5/79 (6%)
Query: 16 GKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKA----EILHEVAVLEACRCNSRIVQLH 71
          G++A V++CR++  G QYAAKF++K+R  +  +     +I  EV++L+  + +  ++ LH
Sbjct: 22 GQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ-HPNVITLH 80
Query: 72 QVFESSHDMILLLELLTSA 90
          +V+E+  D+IL+LEL+   
Sbjct: 81 EVYENKTDVILILELVAGG 99

>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant Length = 334

Iteration: 1
 Score = 62.0 bits (149), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 28/79 (35%), Positives = 53/79 (67%), Gaps = 5/79 (6%)
Query: 16 GKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKA----EILHEVAVLEACRCNSRIVQLH 71
          G++A V++CR++  G QYAAKF++K+R  +  +     +I  EV++L+  + +  ++ LH
Sbjct: 22 GQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ-HPNVITLH 80
Query: 72 QVFESSHDMILLLELLTSA 90
          +V+E+  D+IL+LEL+   
Sbjct: 81 EVYENKTDVILILELVAGG 99

>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp Length = 295

Iteration: 1
 Score = 60.8 bits (146), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 28/79 (35%), Positives = 52/79 (65%), Gaps = 5/79 (6%)
Query: 16 GKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKA----EILHEVAVLEACRCNSRIVQLH 71
          G +A V++CR++  G QYAAKF++K+R  +  +     +I  EV++L+  + +  ++ LH
Sbjct: 22 GVFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ-HPNVITLH 80
Query: 72 QVFESSHDMILLLELLTSA 90
          +V+E+  D+IL+LEL+   
Sbjct: 81 EVYENKTDVILILELVAGG 99

>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine Length = 295

Iteration: 1
 Score = 59.3 bits (142), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 27/79 (34%), Positives = 52/79 (65%), Gaps = 5/79 (6%)
Query: 16 GKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKA----EILHEVAVLEACRCNSRIVQLH 71
          G++A V++CR++  G QYAAKF++K+R  +  +     +I  EV++L+  + +  ++ LH
Sbjct: 22 GQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ-HPNVITLH 80
Query: 72 QVFESSHDMILLLELLTSA 90
          +V+E+  D+IL+ EL+   
Sbjct: 81 EVYENKTDVILIGELVAGG 99

>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2 Length = 361

Iteration: 1
 Score = 57.8 bits (138), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 28/79 (35%), Positives = 51/79 (64%), Gaps = 5/79 (6%)
Query: 16  GKYATVRRCRDRKNGTQYAAKFLRKKR----RSTDLKAEILHEVAVLEACRCNSRIVQLH 71
           G++A V++CR++  G +YAAKF++K++    R    + EI  EV++L     +  I+ LH
Sbjct: 23  GQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQV-LHPNIITLH 81
Query: 72  QVFESSHDMILLLELLTSA 90
            V+E+  D++L+LEL++  
Sbjct: 82  DVYENRTDVVLILELVSGG 100

>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1 Kinase Length = 288

Iteration: 1
 Score = 57.0 bits (136), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 28/80 (35%), Positives = 51/80 (63%), Gaps = 7/80 (8%)
Query: 16  GKYATVRRCRDRKNGTQYAAKFLRKK-----RRSTDLKAEILHEVAVLEACRCNSRIVQL 70
           G++A V++CR++  G +YAAKF++K+     RR    + EI  EV++L     +  ++ L
Sbjct: 23  GQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVS-REEIEREVSILRQV-LHHNVITL 80
Query: 71  HQVFESSHDMILLLELLTSA 90
           H V+E+  D++L+LEL++  
Sbjct: 81  HDVYENRTDVVLILELVSGG 100

>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The Autoinhibited Conformation Of A Human Death-associated Protein Kinase Length = 321

Iteration: 1
 Score = 57.0 bits (136), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 28/80 (35%), Positives = 51/80 (63%), Gaps = 7/80 (8%)
Query: 16  GKYATVRRCRDRKNGTQYAAKFLRKK-----RRSTDLKAEILHEVAVLEACRCNSRIVQL 70
           G++A V++CR++  G +YAAKF++K+     RR    + EI  EV++L     +  ++ L
Sbjct: 23  GQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVS-REEIEREVSILRQV-LHHNVITL 80
Query: 71  HQVFESSHDMILLLELLTSA 90
           H V+E+  D++L+LEL++  
Sbjct: 81  HDVYENRTDVVLILELVSGG 100

>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40 Length = 321

Iteration: 1
 Score = 57.0 bits (136), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 28/80 (35%), Positives = 51/80 (63%), Gaps = 7/80 (8%)
Query: 16  GKYATVRRCRDRKNGTQYAAKFLRKK-----RRSTDLKAEILHEVAVLEACRCNSRIVQL 70
           G++A V++CR++  G +YAAKF++K+     RR    + EI  EV++L     +  ++ L
Sbjct: 23  GQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVS-REEIEREVSILRQV-LHHNVITL 80
Query: 71  HQVFESSHDMILLLELLTSA 90
           H V+E+  D++L+LEL++  
Sbjct: 81  HDVYENRTDVVLILELVSGG 100

>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form With 8 Monomers In The Asymmetric Unit Length = 321

Iteration: 1
 Score = 57.0 bits (136), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 28/80 (35%), Positives = 51/80 (63%), Gaps = 7/80 (8%)
Query: 16  GKYATVRRCRDRKNGTQYAAKFLRKK-----RRSTDLKAEILHEVAVLEACRCNSRIVQL 70
           G++A V++CR++  G +YAAKF++K+     RR    + EI  EV++L     +  ++ L
Sbjct: 23  GQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVS-REEIEREVSILRQV-LHHNVITL 80
Query: 71  HQVFESSHDMILLLELLTSA 90
           H V+E+  D++L+LEL++  
Sbjct: 81  HDVYENRTDVVLILELVSGG 100

>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form With 3 Monomers In The Asymmetric Unit Length = 321

Iteration: 1
 Score = 57.0 bits (136), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 28/80 (35%), Positives = 51/80 (63%), Gaps = 7/80 (8%)
Query: 16  GKYATVRRCRDRKNGTQYAAKFLRKK-----RRSTDLKAEILHEVAVLEACRCNSRIVQL 70
           G++A V++CR++  G +YAAKF++K+     RR    + EI  EV++L     +  ++ L
Sbjct: 23  GQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVS-REEIEREVSILRQV-LHHNVITL 80
Query: 71  HQVFESSHDMILLLELLTSA 90
           H V+E+  D++L+LEL++  
Sbjct: 81  HDVYENRTDVVLILELVSGG 100

>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain Kinase Loc340156. Length = 373

Iteration: 1
 Score = 45.1 bits (105), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 25/86 (29%), Positives = 48/86 (55%), Gaps = 5/86 (5%)
Query: 16  GKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFE 75
           G++  V +C +   G + AAK +  K R    K E+ +E++V+     ++ ++QL+  FE
Sbjct: 100 GRFGQVHKCEETATGLKLAAKII--KTRGMKDKEEVKNEISVMNQLD-HANLIQLYDAFE 156
Query: 76  SSHDMILLLELLTSA--VDSKIRESF 99
           S +D++L++E +      D  I ES+
Sbjct: 157 SKNDIVLVMEYVDGGELFDRIIDESY 182

>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1 In With Amp-Pnp Length = 325

Iteration: 1
 Score = 42.7 bits (99), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 21/75 (28%), Positives = 38/75 (50%), Gaps = 5/75 (6%)
Query: 16 GKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFE 75
          G ++  R+C  +K+   +A K + K+     ++A    E+  L+ C  +  IV+LH+VF 
Sbjct: 22 GSFSICRKCVHKKSNQAFAVKIISKR-----MEANTQKEITALKLCEGHPNIVKLHEVFH 76
Query: 76 SSHDMILLLELLTSA 90
                L++ELL   
Sbjct: 77 DQLHTFLVMELLNGG 91

>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In Complex With Ca2+ And Amppnp Length = 494

Iteration: 1
 Score = 41.2 bits (95), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 24/70 (34%), Positives = 38/70 (54%), Gaps = 1/70 (1%)
Query: 16  GKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFE 75
           G Y  V  CRD+    + A K +RK   ST   +++L EVAVL+    +  I++L+  FE
Sbjct: 48  GAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLD-HPNIMKLYDFFE 106
Query: 76  SSHDMILLLE 85
              +  L++E
Sbjct: 107 DKRNYYLVME 116

>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans (Fn31-Nl-Kin-Crd-Ig26) Length = 573

Iteration: 1
 Score = 40.8 bits (94), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 20/73 (27%), Positives = 36/73 (49%), Gaps = 3/73 (4%)
Query: 16  GKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFE 75
           G +  V R  +R  G  +AAKF+     S   K  +  E+  +   R +  +V LH  FE
Sbjct: 168 GAFGVVHRVTERATGNNFAAKFVMTPHESD--KETVRKEIQTMSVLR-HPTLVNLHDAFE 224
Query: 76  SSHDMILLLELLT 88
             ++M+++ E ++
Sbjct: 225 DDNEMVMIYEFMS 237

>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated Protein Kinase And Immunoglobulin Domains Length = 491

Iteration: 1
 Score = 40.8 bits (94), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 20/73 (27%), Positives = 36/73 (49%), Gaps = 3/73 (4%)
Query: 16  GKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFE 75
           G +  V R  +R  G  +AAKF+     S   K  +  E+  +   R +  +V LH  FE
Sbjct: 62  GAFGVVHRVTERATGNNFAAKFVMTPHESD--KETVRKEIQTMSVLR-HPTLVNLHDAFE 118
Query: 76  SSHDMILLLELLT 88
             ++M+++ E ++
Sbjct: 119 DDNEMVMIYEFMS 131

>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein Kinase Domain Length = 387

Iteration: 1
 Score = 40.0 bits (92), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 23/91 (25%), Positives = 46/91 (50%), Gaps = 11/91 (12%)
Query: 16  GKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFE 75
           G +  V RC ++  G  + AKF+         K  + +E++++     + +++ LH  FE
Sbjct: 62  GAFGVVHRCVEKATGRVFVAKFINTPYPLD--KYTVKNEISIMNQLH-HPKLINLHDAFE 118
Query: 76  SSHDMILLLELLT--------SAVDSKIRES 98
             ++M+L+LE L+        +A D K+ E+
Sbjct: 119 DKYEMVLILEFLSGGELFDRIAAEDYKMSEA 149

>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain Length = 307

Iteration: 1
 Score = 39.7 bits (91), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 22/75 (29%), Positives = 36/75 (48%), Gaps = 2/75 (2%)
Query: 16 GKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFE 75
          G YA V+     +NG +YA K + K+   +  ++ +  EV  L  C+ N  I++L + FE
Sbjct: 24 GAYAKVQGAVSLQNGKEYAVKIIEKQAGHS--RSRVFREVETLYQCQGNKNILELIEFFE 81
Query: 76 SSHDMILLLELLTSA 90
                L+ E L   
Sbjct: 82 DDTRFYLVFEKLQGG 96

>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle Protein Titin Length = 321

Iteration: 1
 Score = 38.9 bits (89), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 21/74 (28%), Positives = 42/74 (56%), Gaps = 4/74 (5%)
Query: 16 GKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFE 75
          G++  V RC +  +   Y AKF++ K   TD +  +  E+++L   R +  I+ LH+ FE
Sbjct: 16 GEFGIVHRCVETSSKKTYMAKFVKVK--GTD-QVLVKKEISILNIAR-HRNILHLHESFE 71
Query: 76 SSHDMILLLELLTS 89
          S  +++++ E ++ 
Sbjct: 72 SMEELVMIFEFISG 85

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	126
3lm5_A	327	Serine/threonine-protein kinase 17B; STK17B, serin	3e-23
3bhy_A	283	Death-associated protein kinase 3; death associate	3e-19
2a2a_A	321	Death-associated protein kinase 2; autoinhibition,	3e-18
2y0a_A	326	Death-associated protein kinase 1; transferase, ca	4e-18
2yab_A	361	Death-associated protein kinase 2; apoptosis, tran	1e-17
2x4f_A	373	Myosin light chain kinase family member 4; LUNG, b	2e-17
1tki_A	321	Titin; serine kinase, muscle, autoinhibition; 2.00	7e-17
1kob_A	387	Twitchin; kinase, intrasteric regulation; 2.30A {A	1e-16
3uto_A	573	Twitchin; kinase, muscle sarcomere, transferase; H	2e-16
1phk_A	298	Phosphorylase kinase; glycogen metabolism, transfe	1e-12
2ac3_A	316	MAP kinase-interacting serine/threonine kinase 2;	1e-12
3kk8_A	284	Calcium/calmodulin dependent protein kinase II; AT	2e-12
2y7j_A	365	Phosphorylase B kinase gamma catalytic chain, test	5e-12
3hko_A	345	Calcium/calmodulin-dependent protein kinase with d	6e-12
3kn6_A	325	Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1	7e-12
2bdw_A	362	Hypothetical protein K11E8.1D; kinase, calmodulin	8e-12
2jam_A	304	Calcium/calmodulin-dependent protein kinase type 1	1e-11
2w4o_A	349	Calcium/calmodulin-dependent protein kinase type I	3e-11
3is5_A	285	Calcium-dependent protein kinase; CDPK, structural	7e-11
3soa_A	444	Calcium/calmodulin-dependent protein kinase type a	7e-11
3c0i_A	351	Peripheral plasma membrane protein CASK; neurexin,	7e-11
2qr7_A	342	Ribosomal protein S6 kinase alpha-3; kinase domain	9e-11
2wei_A	287	Calmodulin-domain protein kinase 1, putative; nucl	1e-10
3p1a_A	311	MYT1 kinase, membrane-associated tyrosine- and thr	4e-10
3lij_A	494	Calcium/calmodulin dependent protein kinase with A	6e-10
3mwu_A	486	Calmodulin-domain protein kinase 1; serine/threoni	1e-09
3cek_A	313	Dual specificity protein kinase TTK; HMPS1, PYT, E	1e-09
3f3z_A	277	Calcium/calmodulin-dependent protein kinase with d	2e-09
3nyv_A	484	Calmodulin-domain protein kinase 1; serine/threoni	6e-09
3fhr_A	336	MAP kinase-activated protein kinase 3; kinase-inhi	6e-09
3dbq_A	343	Dual specificity protein kinase TTK; MPS1 structur	1e-08
2owb_A	335	Serine/threonine-protein kinase PLK1; catalytic do	1e-08
1nxk_A	400	MAP kinase-activated protein kinase 2; MK2, phosph	2e-08
2ycf_A	322	Serine/threonine-protein kinase CHK2; transferase,	3e-08
3i6u_A	419	CDS1, serine/threonine-protein kinase CHK2; Ser/Th	3e-08
2rku_A	294	Serine/threonine-protein kinase PLK1; structure of	3e-08
2zmd_A	390	Dual specificity protein kinase TTK; MPS1, T686A,	5e-08
4euu_A	319	Serine/threonine-protein kinase TBK1; ATP binding,	6e-08
3m2w_A	299	MAP kinase-activated protein kinase 2; small molec	7e-08
2iwi_A	312	Serine/threonine-protein kinase PIM-2; nucleotide-	8e-08
1x8b_A	289	WEE1HU, WEE1-like protein kinase; cell cycle, tran	2e-07
4apc_A	350	Serine/threonine-protein kinase NEK1; transferase;	2e-07
4eut_A	396	Serine/threonine-protein kinase TBK1; ATP binding,	2e-07
3a99_A	320	Proto-oncogene serine/threonine-protein kinase PI;	5e-07
3cok_A	278	Serine/threonine-protein kinase PLK4; POLO-like ki	6e-07
2vgo_A	284	Serine/threonine-protein kinase 12-A; nucleotide-b	8e-07
3fdn_A	279	Serine/threonine-protein kinase 6; aurora kinase i	8e-07
3q5i_A	504	Protein kinase; CDPK, malaria, phosphotransferase,	1e-06
2w5a_A	279	Serine/threonine-protein kinase NEK2; Ser/Thr prot	3e-06
3dls_A	335	PAS domain-containing serine/threonine-protein KI;	4e-06
2dyl_A	318	Dual specificity mitogen-activated protein kinase	5e-06
3p23_A	432	Serine/threonine-protein kinase/endoribonuclease;	8e-06
3q60_A	371	ROP5B; pseudokinase, transferase; HET: ATP; 1.72A	1e-05
2a19_B	284	Interferon-induced, double-stranded RNA-activated	2e-05
2eue_A	275	Carbon catabolite derepressing protein kinase; kin	2e-05
3qa8_A	676	MGC80376 protein; kinase ubiquitin-like domain, ph	2e-05
3fe3_A	328	MAP/microtubule affinity-regulating kinase 3; seri	3e-05
2h6d_A	276	5'-AMP-activated protein kinase catalytic subunit	4e-05
3h4j_B	336	AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin	4e-05
3byv_A	377	Rhoptry kinase; malaria, transferase, structural g	6e-05
3dzo_A	413	Rhoptry kinase domain; parasitic disease, transfer	7e-05
2rio_A	434	Serine/threonine-protein kinase/endoribonuclease I	7e-05
2yex_A	276	Serine/threonine-protein kinase CHK1; transferase,	9e-05
3ll6_A	337	Cyclin G-associated kinase; transferase, protein k	9e-05
4g31_A	299	Eukaryotic translation initiation factor 2-alpha;	1e-04
3uc3_A	361	Serine/threonine-protein kinase SRK2I; SNRK2, ABA	1e-04
2buj_A	317	Serine/threonine-protein kinase 16; transferase, A	1e-04
2y94_A	476	5'-AMP-activated protein kinase catalytic subunit;	1e-04
3tki_A	323	Serine/threonine-protein kinase CHK1; cell checkpo	2e-04
2acx_A	576	G protein-coupled receptor kinase 6; GRK, G transf	2e-04
2wtk_C	305	Serine/threonine-protein kinase 11; transferase-me	2e-04
3aln_A	327	Dual specificity mitogen-activated protein kinase;	4e-04
3pvu_A	695	Beta-adrenergic receptor kinase 1; transferase, se	5e-04
1q8y_A	373	SR protein kinase; transferase; HET: ADP ADE; 2.05	6e-04
2pml_X	348	PFPK7, Ser/Thr protein kinase; phosphorylati trans	7e-04
3c4z_A	543	Rhodopsin kinase; Ser/Thr kinase, RGS homology dom	8e-04
1uu3_A	310	HPDK1, 3-phosphoinositide dependent protein kinase	9e-04

>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A* Length = 327

 Score = 90.8 bits (226), Expect = 3e-23
 Identities = 36/73 (49%), Positives = 54/73 (73%)

Query: 16  GKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFE 75
           GK+A VR+C  +  G +YAAKFL+K+RR  D +AEILHE+AVLE  +   R++ LH+V+E
Sbjct: 40  GKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVINLHEVYE 99

Query: 76  SSHDMILLLELLT 88
           ++ ++IL+LE   
Sbjct: 100 NTSEIILILEYAA 112

>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ... Length = 283

 Score = 79.5 bits (197), Expect = 3e-19
 Identities = 31/77 (40%), Positives = 50/77 (64%), Gaps = 5/77 (6%)

Query: 16 GKYATVRRCRDRKNGTQYAAKFLRKKR----RSTDLKAEILHEVAVLEACRCNSRIVQLH 71
          G++A VR+CR +  G +YAAKF++K+R    R    + EI  EV +L   R +  I+ LH
Sbjct: 16 GQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIR-HPNIITLH 74

Query: 72 QVFESSHDMILLLELLT 88
           +FE+  D++L+LEL++
Sbjct: 75 DIFENKTDVVLILELVS 91

>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A Length = 321

 Score = 77.3 bits (191), Expect = 3e-18
 Identities = 27/77 (35%), Positives = 51/77 (66%), Gaps = 5/77 (6%)

Query: 16 GKYATVRRCRDRKNGTQYAAKFLRKKR----RSTDLKAEILHEVAVLEACRCNSRIVQLH 71
          G++A V++CR++  G +YAAKF++K++    R    + EI  EV++L     +  ++ LH
Sbjct: 23 GQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVL-HHNVITLH 81

Query: 72 QVFESSHDMILLLELLT 88
           V+E+  D++L+LEL++
Sbjct: 82 DVYENRTDVVLILELVS 98

>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens} Length = 326

 Score = 76.9 bits (190), Expect = 4e-18
 Identities = 29/77 (37%), Positives = 53/77 (68%), Gaps = 5/77 (6%)

Query: 16 GKYATVRRCRDRKNGTQYAAKFLRKKR----RSTDLKAEILHEVAVLEACRCNSRIVQLH 71
          G++A V++CR++  G QYAAKF++K+R    R    + +I  EV++L+  + +  ++ LH
Sbjct: 22 GQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ-HPNVITLH 80

Query: 72 QVFESSHDMILLLELLT 88
          +V+E+  D+IL+LEL+ 
Sbjct: 81 EVYENKTDVILILELVA 97

>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A* Length = 361

 Score = 75.9 bits (187), Expect = 1e-17
 Identities = 27/77 (35%), Positives = 50/77 (64%), Gaps = 5/77 (6%)

Query: 16 GKYATVRRCRDRKNGTQYAAKFLRKKRRSTD----LKAEILHEVAVLEACRCNSRIVQLH 71
          G++A V++CR++  G +YAAKF++K++         + EI  EV++L     +  I+ LH
Sbjct: 23 GQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVL-HPNIITLH 81

Query: 72 QVFESSHDMILLLELLT 88
           V+E+  D++L+LEL++
Sbjct: 82 DVYENRTDVVLILELVS 98

>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens} Length = 373

 Score = 75.9 bits (187), Expect = 2e-17
 Identities = 20/73 (27%), Positives = 43/73 (58%), Gaps = 3/73 (4%)

Query: 16  GKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFE 75
           G++  V +C +   G + AAK ++   R    K E+ +E++V+     ++ ++QL+  FE
Sbjct: 100 GRFGQVHKCEETATGLKLAAKIIKT--RGMKDKEEVKNEISVMNQLD-HANLIQLYDAFE 156

Query: 76  SSHDMILLLELLT 88
           S +D++L++E + 
Sbjct: 157 SKNDIVLVMEYVD 169

>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7 Length = 321

 Score = 73.4 bits (181), Expect = 7e-17
 Identities = 19/73 (26%), Positives = 40/73 (54%), Gaps = 4/73 (5%)

Query: 16 GKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFE 75
          G++  V RC +  +   Y AKF++ K      +  +  E+++L   R +  I+ LH+ FE
Sbjct: 16 GEFGIVHRCVETSSKKTYMAKFVKVKGTD---QVLVKKEISILNIAR-HRNILHLHESFE 71

Query: 76 SSHDMILLLELLT 88
          S  +++++ E ++
Sbjct: 72 SMEELVMIFEFIS 84

>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7 Length = 387

 Score = 73.2 bits (180), Expect = 1e-16
 Identities = 19/73 (26%), Positives = 39/73 (53%), Gaps = 3/73 (4%)

Query: 16  GKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFE 75
           G +  V RC ++  G  + AKF+         K  + +E++++     + +++ LH  FE
Sbjct: 62  GAFGVVHRCVEKATGRVFVAKFINTPYPLD--KYTVKNEISIMNQLH-HPKLINLHDAFE 118

Query: 76  SSHDMILLLELLT 88
             ++M+L+LE L+
Sbjct: 119 DKYEMVLILEFLS 131

>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A Length = 573

 Score = 72.9 bits (179), Expect = 2e-16
 Identities = 20/73 (27%), Positives = 36/73 (49%), Gaps = 3/73 (4%)

Query: 16  GKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFE 75
           G +  V R  +R  G  +AAKF+     S   K  +  E+  +   R +  +V LH  FE
Sbjct: 168 GAFGVVHRVTERATGNNFAAKFVMTPHESD--KETVRKEIQTMSVLR-HPTLVNLHDAFE 224

Query: 76  SSHDMILLLELLT 88
             ++M+++ E ++
Sbjct: 225 DDNEMVMIYEFMS 237

>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A* Length = 298

 Score = 61.5 bits (150), Expect = 1e-12
 Identities = 19/80 (23%), Positives = 35/80 (43%), Gaps = 7/80 (8%)

Query: 16  GKYATVRRCRDRKNGTQYAAKFLRKKRRST-------DLKAEILHEVAVLEACRCNSRIV 68
           G  + VRRC  +    +YA K +      +       +L+   L EV +L     +  I+
Sbjct: 28  GVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNII 87

Query: 69  QLHQVFESSHDMILLLELLT 88
           QL   +E++    L+ +L+ 
Sbjct: 88  QLKDTYETNTFFFLVFDLMK 107

>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A Length = 316

 Score = 61.5 bits (150), Expect = 1e-12
 Identities = 17/73 (23%), Positives = 35/73 (47%), Gaps = 2/73 (2%)

Query: 16 GKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFE 75
          G +A V+ C +     +YA K + K+      ++ +  EV +L  C+ +  +++L + FE
Sbjct: 24 GAHARVQTCINLITSQEYAVKIIEKQPGHI--RSRVFREVEMLYQCQGHRNVLELIEFFE 81

Query: 76 SSHDMILLLELLT 88
                L+ E + 
Sbjct: 82 EEDRFYLVFEKMR 94

>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A* Length = 284

 Score = 61.0 bits (149), Expect = 2e-12
 Identities = 20/74 (27%), Positives = 36/74 (48%), Gaps = 3/74 (4%)

Query: 16 GKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACR-CNSRIVQLHQVF 74
          G ++ VRRC  +  G ++AAK +  K+ S     ++  E  +    +  N  IV+LH   
Sbjct: 17 GAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPN--IVRLHDSI 74

Query: 75 ESSHDMILLLELLT 88
          +      L+ +L+T
Sbjct: 75 QEESFHYLVFDLVT 88

>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A Length = 365

 Score = 60.1 bits (146), Expect = 5e-12
 Identities = 19/79 (24%), Positives = 33/79 (41%), Gaps = 6/79 (7%)

Query: 16  GKYATVRRCRDRKNGTQYAAKFLRKKRRST------DLKAEILHEVAVLEACRCNSRIVQ 69
           G  + VRRC  R  G ++A K +             +++     E  +L     +  I+ 
Sbjct: 105 GVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIIT 164

Query: 70  LHQVFESSHDMILLLELLT 88
           L   +ESS  M L+ +L+ 
Sbjct: 165 LIDSYESSSFMFLVFDLMR 183

>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II} Length = 345

 Score = 60.2 bits (146), Expect = 6e-12
 Identities = 17/76 (22%), Positives = 33/76 (43%), Gaps = 4/76 (5%)

Query: 16  GKYATVRRCRDRKNGTQYAAKFLRKKR---RSTDLKAEILHEVAVLEACRCNSRIVQLHQ 72
           G Y  VR   + +     A K + K +    +      I  EV +++    +  I +L++
Sbjct: 37  GSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLH-HPNIARLYE 95

Query: 73  VFESSHDMILLLELLT 88
           V+E    + L++EL  
Sbjct: 96  VYEDEQYICLVMELCH 111

>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A Length = 325

 Score = 59.6 bits (145), Expect = 7e-12
 Identities = 21/73 (28%), Positives = 36/73 (49%), Gaps = 5/73 (6%)

Query: 16 GKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFE 75
          G ++  R+C  +K+   +A K + K+       A    E+  L+ C  +  IV+LH+VF 
Sbjct: 22 GSFSICRKCVHKKSNQAFAVKIISKRME-----ANTQKEITALKLCEGHPNIVKLHEVFH 76

Query: 76 SSHDMILLLELLT 88
                L++ELL 
Sbjct: 77 DQLHTFLVMELLN 89

>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B Length = 362

 Score = 59.6 bits (145), Expect = 8e-12
 Identities = 19/73 (26%), Positives = 36/73 (49%), Gaps = 1/73 (1%)

Query: 16  GKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFE 75
           G ++ VRRC  +  G ++AAK +  K+ S     ++  E  +    + +  IV+LH   +
Sbjct: 40  GAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQ-HPNIVRLHDSIQ 98

Query: 76  SSHDMILLLELLT 88
                 L+ +L+T
Sbjct: 99  EESFHYLVFDLVT 111

>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A Length = 304

 Score = 58.7 bits (143), Expect = 1e-11
 Identities = 19/74 (25%), Positives = 39/74 (52%), Gaps = 5/74 (6%)

Query: 16 GKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACR-CNSRIVQLHQVF 74
          G ++ V   + R  G  +A K ++K        + + +E+AVL+  +  N  IV L  ++
Sbjct: 20 GAFSEVFLVKQRLTGKLFALKCIKKSPAFR--DSSLENEIAVLKKIKHEN--IVTLEDIY 75

Query: 75 ESSHDMILLLELLT 88
          ES+    L+++L++
Sbjct: 76 ESTTHYYLVMQLVS 89

>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens} Length = 349

 Score = 58.1 bits (141), Expect = 3e-11
 Identities = 20/75 (26%), Positives = 39/75 (52%), Gaps = 9/75 (12%)

Query: 16  GKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAE--ILHEVAVLEACRCNSRIVQLHQV 73
           G  + V RC+ +     YA K L+K      ++ E  +L  ++       +  I++L ++
Sbjct: 64  GATSIVYRCKQKGTQKPYALKVLKKTVDKKIVRTEIGVLLRLS-------HPNIIKLKEI 116

Query: 74  FESSHDMILLLELLT 88
           FE+  ++ L+LEL+T
Sbjct: 117 FETPTEISLVLELVT 131

>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii} Length = 285

 Score = 56.9 bits (138), Expect = 7e-11
 Identities = 18/73 (24%), Positives = 38/73 (52%), Gaps = 2/73 (2%)

Query: 16  GKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFE 75
           G +  V    +R +G +   K + K R    ++ +I  E+ VL++   +  I+++ +VFE
Sbjct: 33  GAFGDVHLVEERSSGLERVIKTINKDRSQVPME-QIEAEIEVLKSLD-HPNIIKIFEVFE 90

Query: 76  SSHDMILLLELLT 88
             H+M +++E   
Sbjct: 91  DYHNMYIVMETCE 103

>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens} Length = 444

 Score = 56.9 bits (138), Expect = 7e-11
 Identities = 19/73 (26%), Positives = 33/73 (45%), Gaps = 1/73 (1%)

Query: 16 GKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFE 75
          G ++ VRRC     G +YAA  +  K+ S     ++  E  +    + +  IV+LH    
Sbjct: 22 GAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLK-HPNIVRLHDSIS 80

Query: 76 SSHDMILLLELLT 88
                L+ +L+T
Sbjct: 81 EEGHHYLIFDLVT 93

>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A Length = 351

 Score = 56.9 bits (138), Expect = 7e-11
 Identities = 16/76 (21%), Positives = 38/76 (50%), Gaps = 4/76 (5%)

Query: 16  GKYATVRRCRDRKNGTQYAAKFLRKKRRSTDL---KAEILHEVAVLEACRCNSRIVQLHQ 72
           G ++ VRRC +R+ G Q+A K +   + ++       ++  E ++    + +  IV+L +
Sbjct: 35  GPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLK-HPHIVELLE 93

Query: 73  VFESSHDMILLLELLT 88
            + S   + ++ E + 
Sbjct: 94  TYSSDGMLYMVFEFMD 109

>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A Length = 342

 Score = 56.5 bits (137), Expect = 9e-11
 Identities = 15/73 (20%), Positives = 33/73 (45%), Gaps = 6/73 (8%)

Query: 16 GKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFE 75
          G Y+  +RC  +    ++A K + K +R      +   E+ +L     +  I+ L  V++
Sbjct: 33 GSYSVCKRCIHKATNMEFAVKIIDKSKR------DPTEEIEILLRYGQHPNIITLKDVYD 86

Query: 76 SSHDMILLLELLT 88
              + ++ EL+ 
Sbjct: 87 DGKYVYVVTELMK 99

>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A* Length = 287

 Score = 56.1 bits (136), Expect = 1e-10
 Identities = 21/73 (28%), Positives = 36/73 (49%), Gaps = 1/73 (1%)

Query: 16  GKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFE 75
           G +  V +C+DR    +YA K + K        + IL EV +L+    +  I++L ++ E
Sbjct: 33  GSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLD-HPNIMKLFEILE 91

Query: 76  SSHDMILLLELLT 88
            S    ++ EL T
Sbjct: 92  DSSSFYIVGELYT 104

>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens} Length = 311

 Score = 54.6 bits (132), Expect = 4e-10
 Identities = 21/71 (29%), Positives = 30/71 (42%)

Query: 16  GKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFE 75
           G Y  V + R +++G  YA K      R    +A  L EV   E    +   V+L Q +E
Sbjct: 68  GSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQAWE 127

Query: 76  SSHDMILLLEL 86
               + L  EL
Sbjct: 128 EGGILYLQTEL 138

>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A* Length = 494

 Score = 54.3 bits (131), Expect = 6e-10
 Identities = 24/73 (32%), Positives = 38/73 (52%), Gaps = 1/73 (1%)

Query: 16  GKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFE 75
           G Y  V  CRD+    + A K +RK   ST   +++L EVAVL+    +  I++L+  FE
Sbjct: 48  GAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLD-HPNIMKLYDFFE 106

Query: 76  SSHDMILLLELLT 88
              +  L++E   
Sbjct: 107 DKRNYYLVMECYK 119

>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A* Length = 486

 Score = 53.9 bits (130), Expect = 1e-09
 Identities = 21/73 (28%), Positives = 36/73 (49%), Gaps = 1/73 (1%)

Query: 16  GKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFE 75
           G +  V +C+DR    +YA K + K        + IL EV +L+    +  I++L ++ E
Sbjct: 33  GSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLD-HPNIMKLFEILE 91

Query: 76  SSHDMILLLELLT 88
            S    ++ EL T
Sbjct: 92  DSSSFYIVGELYT 104

>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A* Length = 313

 Score = 53.5 bits (129), Expect = 1e-09
 Identities = 11/72 (15%), Positives = 31/72 (43%), Gaps = 2/72 (2%)

Query: 16  GKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACR-CNSRIVQLHQVF 74
           G  + V +  + +    YA K++  +           +E+A L   +  + +I++L+   
Sbjct: 39  GGSSKVFQVLN-EKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYE 97

Query: 75  ESSHDMILLLEL 86
            +   + +++E 
Sbjct: 98  ITDQYIYMVMEC 109

>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A* Length = 277

 Score = 52.6 bits (127), Expect = 2e-09
 Identities = 16/73 (21%), Positives = 35/73 (47%), Gaps = 3/73 (4%)

Query: 16 GKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFE 75
          G +  V+    +    + AAK + K             E+ ++++   +  I++L++ FE
Sbjct: 20 GSWGEVKIAVQKGTRIRRAAKKIPKYFVED--VDRFKQEIEIMKSLD-HPNIIRLYETFE 76

Query: 76 SSHDMILLLELLT 88
           + D+ L++EL T
Sbjct: 77 DNTDIYLVMELCT 89

>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A* Length = 484

 Score = 51.6 bits (124), Expect = 6e-09
 Identities = 20/74 (27%), Positives = 38/74 (51%), Gaps = 2/74 (2%)

Query: 16  GKYATVRRCRDRKNGTQYAAKFLRKKR-RSTDLKAEILHEVAVLEACRCNSRIVQLHQVF 74
           G +  V  C+D+  G + A K + K++ +    K  +L EV +L+    +  I++L++ F
Sbjct: 37  GSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLD-HPNIMKLYEFF 95

Query: 75  ESSHDMILLLELLT 88
           E      L+ E+ T
Sbjct: 96  EDKGYFYLVGEVYT 109

>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A* Length = 336

 Score = 51.6 bits (124), Expect = 6e-09
 Identities = 16/77 (20%), Positives = 26/77 (33%), Gaps = 11/77 (14%)

Query: 16  GKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFE 75
           G    V  C  R+ G + A K L    +          EV           IV +  V+E
Sbjct: 40  GVNGKVLECFHRRTGQKCALKLLYDSPK-------ARQEVDHHWQASGGPHIVCILDVYE 92

Query: 76  SSHDMI----LLLELLT 88
           + H       +++E + 
Sbjct: 93  NMHHGKRCLLIIMECME 109

>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens} Length = 343

 Score = 50.9 bits (122), Expect = 1e-08
 Identities = 11/72 (15%), Positives = 31/72 (43%), Gaps = 2/72 (2%)

Query: 16 GKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACR-CNSRIVQLHQVF 74
          G  + V +  + +    YA K++  +           +E+A L   +  + +I++L+   
Sbjct: 20 GGSSKVFQVLN-EKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYE 78

Query: 75 ESSHDMILLLEL 86
           +   + +++E 
Sbjct: 79 ITDQYIYMVMEC 90

>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A* Length = 335

 Score = 50.8 bits (122), Expect = 1e-08
 Identities = 14/72 (19%), Positives = 30/72 (41%), Gaps = 2/72 (2%)

Query: 16  GKYATVRRCRDRKNGTQYAAKFLRKKR-RSTDLKAEILHEVAVLEACRCNSRIVQLHQVF 74
           G +A      D      +A K + K        + ++  E+++  +   +  +V  H  F
Sbjct: 52  GGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLA-HQHVVGFHGFF 110

Query: 75  ESSHDMILLLEL 86
           E +  + ++LEL
Sbjct: 111 EDNDFVFVVLEL 122

>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C Length = 400

 Score = 49.7 bits (119), Expect = 2e-08
 Identities = 13/77 (16%), Positives = 30/77 (38%), Gaps = 11/77 (14%)

Query: 16  GKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFE 75
           G    V +  +++   ++A K L+   +          EV +         IV++  V+E
Sbjct: 73  GINGKVLQIFNKRTQEKFALKMLQDCPK-------ARREVELHWRASQCPHIVRIVDVYE 125

Query: 76  SSHDMI----LLLELLT 88
           + +       +++E L 
Sbjct: 126 NLYAGRKCLLIVMECLD 142

>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A* Length = 322

 Score = 49.6 bits (119), Expect = 3e-08
 Identities = 17/79 (21%), Positives = 36/79 (45%), Gaps = 8/79 (10%)

Query: 16 GKYATVRRCRDRKNGTQYAAKFLRKKR------RSTDLKAEILHEVAVLEACRCNSRIVQ 69
          G    V+   +RK   + A K + K++      R  D    +  E+ +L+    +  I++
Sbjct: 21 GACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLN-HPCIIK 79

Query: 70 LHQVFESSHDMILLLELLT 88
          +   F+ + D  ++LEL+ 
Sbjct: 80 IKNFFD-AEDYYIVLELME 97

>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A Length = 419

 Score = 49.7 bits (119), Expect = 3e-08
 Identities = 16/79 (20%), Positives = 36/79 (45%), Gaps = 8/79 (10%)

Query: 16  GKYATVRRCRDRKNGTQYAAKFLRKKR------RSTDLKAEILHEVAVLEACRCNSRIVQ 69
           G    V+   +RK   + A + + K++      R  D    +  E+ +L+    +  I++
Sbjct: 146 GACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLN-HPCIIK 204

Query: 70  LHQVFESSHDMILLLELLT 88
           +   F++  D  ++LEL+ 
Sbjct: 205 IKNFFDAE-DYYIVLELME 222

>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A* Length = 294

 Score = 49.5 bits (119), Expect = 3e-08
 Identities = 14/72 (19%), Positives = 30/72 (41%), Gaps = 2/72 (2%)

Query: 16 GKYATVRRCRDRKNGTQYAAKFLRKKR-RSTDLKAEILHEVAVLEACRCNSRIVQLHQVF 74
          G +A      D      +A K + K        + ++  E+++  +   +  +V  H  F
Sbjct: 26 GGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLA-HQHVVGFHGFF 84

Query: 75 ESSHDMILLLEL 86
          E +  + ++LEL
Sbjct: 85 EDNDFVFVVLEL 96

>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A* Length = 390

 Score = 49.0 bits (117), Expect = 5e-08
 Identities = 11/71 (15%), Positives = 31/71 (43%), Gaps = 2/71 (2%)

Query: 16  GKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACR-CNSRIVQLHQVF 74
           G  + V +  + +    YA K++  +           +E+A L   +  + +I++L+   
Sbjct: 67  GGSSKVFQVLN-EKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYE 125

Query: 75  ESSHDMILLLE 85
            +   + +++E
Sbjct: 126 ITDQYIYMVME 136

>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens} Length = 319

 Score = 48.6 bits (116), Expect = 6e-08
 Identities = 18/75 (24%), Positives = 31/75 (41%), Gaps = 4/75 (5%)

Query: 16 GKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFE 75
          G  A V R R +K G  +A K          +    + E  VL+    +  IV+L  + E
Sbjct: 20 GATANVFRGRHKKTGDLFAIKVFNNISFLRPVDV-QMREFEVLKKLN-HKNIVKLFAIEE 77

Query: 76 --SSHDMILLLELLT 88
            ++   +L++E   
Sbjct: 78 ETTTRHKVLIMEFCP 92

>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A* Length = 299

 Score = 48.4 bits (116), Expect = 7e-08
 Identities = 13/77 (16%), Positives = 30/77 (38%), Gaps = 11/77 (14%)

Query: 16 GKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFE 75
          G    V +  +++   ++A K L+   +          EV +         IV++  V+E
Sbjct: 29 GINGKVLQIFNKRTQEKFALKMLQDCPK-------ARREVELHWRASQCPHIVRIVDVYE 81

Query: 76 SSHDMI----LLLELLT 88
          + +       +++E L 
Sbjct: 82 NLYAGRKCLLIVMECLD 98

>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens} Length = 312

 Score = 48.1 bits (115), Expect = 8e-08
 Identities = 19/84 (22%), Positives = 30/84 (35%), Gaps = 7/84 (8%)

Query: 16  GKYATVRRCRDRKNGTQYAAKFLRKKR----RSTDLKAEILHEVAVLEACRCNSR---IV 68
           G + TV       +  Q A K + + R               EVA+L           ++
Sbjct: 42  GGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVI 101

Query: 69  QLHQVFESSHDMILLLELLTSAVD 92
           +L   FE+    +L+LE    A D
Sbjct: 102 RLLDWFETQEGFMLVLERPLPAQD 125

>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A* Length = 289

 Score = 46.9 bits (112), Expect = 2e-07
 Identities = 16/71 (22%), Positives = 30/71 (42%)

Query: 16 GKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFE 75
          G++ +V +C  R +G  YA K  +K    +  +   L EV        +S +V+    + 
Sbjct: 22 GEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYFSAWA 81

Query: 76 SSHDMILLLEL 86
              M++  E 
Sbjct: 82 EDDHMLIQNEY 92

>4apc_A Serine/threonine-protein kinase NEK1; transferase; 2.10A {Homo sapiens} Length = 350

 Score = 47.0 bits (112), Expect = 2e-07
 Identities = 18/70 (25%), Positives = 34/70 (48%), Gaps = 1/70 (1%)

Query: 16  GKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFE 75
           G +      +  ++G QY  K +   R S+  + E   EVAVL   + +  IVQ  + FE
Sbjct: 35  GSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMK-HPNIVQYRESFE 93

Query: 76  SSHDMILLLE 85
            +  + ++++
Sbjct: 94  ENGSLYIVMD 103

>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens} Length = 396

 Score = 46.8 bits (111), Expect = 2e-07
 Identities = 18/75 (24%), Positives = 31/75 (41%), Gaps = 4/75 (5%)

Query: 16 GKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFE 75
          G  A V R R +K G  +A K          +    + E  VL+    +  IV+L  + E
Sbjct: 20 GATANVFRGRHKKTGDLFAIKVFNNISFLRPVDV-QMREFEVLKKLN-HKNIVKLFAIEE 77

Query: 76 --SSHDMILLLELLT 88
            ++   +L++E   
Sbjct: 78 ETTTRHKVLIMEFCP 92

>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ... Length = 320

 Score = 45.8 bits (109), Expect = 5e-07
 Identities = 16/75 (21%), Positives = 28/75 (37%), Gaps = 5/75 (6%)

Query: 16  GKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILH----EVAVLEACRCNSR-IVQL 70
           G + +V       +    A K + K R S   +         EV +L+        +++L
Sbjct: 54  GGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRL 113

Query: 71  HQVFESSHDMILLLE 85
              FE     +L+LE
Sbjct: 114 LDWFERPDSFVLILE 128

>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens} Length = 278

 Score = 45.6 bits (109), Expect = 6e-07
 Identities = 19/72 (26%), Positives = 35/72 (48%), Gaps = 2/72 (2%)

Query: 16 GKYATVRRCRDRKNGTQYAAKFLRKKR-RSTDLKAEILHEVAVLEACRCNSRIVQLHQVF 74
          G +A V R      G + A K + KK      +   + +EV +    + +  I++L+  F
Sbjct: 22 GSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLK-HPSILELYNYF 80

Query: 75 ESSHDMILLLEL 86
          E S+ + L+LE+
Sbjct: 81 EDSNYVYLVLEM 92

>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ... Length = 284

 Score = 45.3 bits (108), Expect = 8e-07
 Identities = 16/71 (22%), Positives = 34/71 (47%), Gaps = 2/71 (2%)

Query: 16 GKYATVRRCRDRKNGTQYAAKFLRKKR-RSTDLKAEILHEVAVLEACRCNSRIVQLHQVF 74
          GK+  V   R+++N    A K L K +     ++ ++  E+ +    R +  I++++  F
Sbjct: 25 GKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLR-HPNILRMYNYF 83

Query: 75 ESSHDMILLLE 85
               + L+LE
Sbjct: 84 HDRKRIYLMLE 94

>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 3lau_A* 2wtv_A* ... Length = 279

 Score = 45.3 bits (108), Expect = 8e-07
 Identities = 17/72 (23%), Positives = 35/72 (48%), Gaps = 2/72 (2%)

Query: 16 GKYATVRRCRDRKNGTQYAAKFLRKKR-RSTDLKAEILHEVAVLEACRCNSRIVQLHQVF 74
          GK+  V   R++++    A K L K +     ++ ++  EV +    R +  I++L+  F
Sbjct: 20 GKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR-HPNILRLYGYF 78

Query: 75 ESSHDMILLLEL 86
            +  + L+LE 
Sbjct: 79 HDATRVYLILEY 90

>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei} Length = 504

 Score = 45.1 bits (107), Expect = 1e-06
 Identities = 18/84 (21%), Positives = 36/84 (42%), Gaps = 12/84 (14%)

Query: 16  GKYATVRRCRDRKNGTQYAAKFLRKKRRSTDL-----------KAEILHEVAVLEACRCN 64
           G Y  V  C+++   ++ A K ++K +                  EI +E+++L++   +
Sbjct: 47  GAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLD-H 105

Query: 65  SRIVQLHQVFESSHDMILLLELLT 88
             I++L  VFE      L+ E   
Sbjct: 106 PNIIKLFDVFEDKKYFYLVTEFYE 129

>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A* Length = 279

 Score = 43.4 bits (103), Expect = 3e-06
 Identities = 13/67 (19%), Positives = 26/67 (38%), Gaps = 1/67 (1%)

Query: 16 GKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFE 75
          G Y   ++ R + +G     K L     +   K  ++ EV +L   + +  IV+ +    
Sbjct: 17 GSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELK-HPNIVRYYDRII 75

Query: 76 SSHDMIL 82
             +  L
Sbjct: 76 DRTNTTL 82

>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens} Length = 335

 Score = 43.6 bits (103), Expect = 4e-06
 Identities = 16/77 (20%), Positives = 36/77 (46%), Gaps = 7/77 (9%)

Query: 16  GKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAE------ILHEVAVLEACRCNSRIVQ 69
           G +  V    D++   +   KF++K++   D   E      +  E+A+L     ++ I++
Sbjct: 35  GAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVE-HANIIK 93

Query: 70  LHQVFESSHDMILLLEL 86
           +  +FE+     L++E 
Sbjct: 94  VLDIFENQGFFQLVMEK 110

>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens} Length = 318

 Score = 43.1 bits (102), Expect = 5e-06
 Identities = 22/90 (24%), Positives = 39/90 (43%), Gaps = 3/90 (3%)

Query: 16  GKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSR-IVQLHQVF 74
           G    V + R RK G   A K +R+     + K  IL ++ V+     +   IVQ    F
Sbjct: 36  GTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENK-RILMDLDVVLKS-HDCPYIVQCFGTF 93

Query: 75  ESSHDMILLLELLTSAVDSKIRESFGSKSE 104
            ++ D+ + +EL+ +  +   +   G   E
Sbjct: 94  ITNTDVFIAMELMGTCAEKLKKRMQGPIPE 123

>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens} Length = 432

 Score = 42.5 bits (100), Expect = 8e-06
 Identities = 12/96 (12%), Positives = 29/96 (30%), Gaps = 6/96 (6%)

Query: 16  GKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFE 75
           G   T+   R   +    A K +  +  S         EV +L     +  +++     +
Sbjct: 35  GAEGTIV-YRGMFDNRDVAVKRILPECFSF-----ADREVQLLRESDEHPNVIRYFCTEK 88

Query: 76  SSHDMILLLELLTSAVDSKIRESFGSKSESGVQNCL 111
                 + +EL  + +   + +   +         L
Sbjct: 89  DRQFQYIAIELCAATLQEYVEQKDFAHLGLEPITLL 124

>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A* Length = 371

 Score = 42.3 bits (99), Expect = 1e-05
 Identities = 11/59 (18%), Positives = 18/59 (30%)

Query: 16  GKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVF 74
           G  + V   RD +    +A K       ++  + E LHE     A        +     
Sbjct: 73  GDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLGESPEEARDRR 131

>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B* Length = 284

 Score = 41.5 bits (98), Expect = 2e-05
 Identities = 13/79 (16%), Positives = 26/79 (32%), Gaps = 7/79 (8%)

Query: 16 GKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFE 75
          G +  V + + R +G  Y  K ++          +   EV  L     +  IV  +  ++
Sbjct: 22 GGFGQVFKAKHRIDGKTYVIKRVKYNNE------KAEREVKALAKLD-HVNIVHYNGCWD 74

Query: 76 SSHDMILLLELLTSAVDSK 94
                      +S   +K
Sbjct: 75 GFDYDPETSSKNSSRSKTK 93

>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A* Length = 676

 Score = 41.6 bits (97), Expect = 2e-05
 Identities = 11/65 (16%), Positives = 26/65 (40%), Gaps = 2/65 (3%)

Query: 16 GKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFE 75
          G +  V R   +  G Q A K  R++    + +     E+ +++    +  +V   +V +
Sbjct: 25 GGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRER-WCLEIQIMKKLN-HPNVVSAREVPD 82

Query: 76 SSHDM 80
              +
Sbjct: 83 GLQKL 87

>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A Length = 328

 Score = 40.7 bits (96), Expect = 3e-05
 Identities = 17/71 (23%), Positives = 35/71 (49%), Gaps = 1/71 (1%)

Query: 16 GKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFE 75
          G +A V+  R    G + A K + K + +     ++  EV +++    +  IV+L +V E
Sbjct: 26 GNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILN-HPNIVKLFEVIE 84

Query: 76 SSHDMILLLEL 86
          +   + L++E 
Sbjct: 85 TEKTLYLIMEY 95

>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A* Length = 276

 Score = 40.7 bits (96), Expect = 4e-05
 Identities = 19/71 (26%), Positives = 38/71 (53%), Gaps = 2/71 (2%)

Query: 16 GKYATVRRCRDRKNGTQYAAKFLRKKR-RSTDLKAEILHEVAVLEACRCNSRIVQLHQVF 74
          G +  V+    +  G + A K L +++ RS D+  +I  E+  L+  R +  I++L+QV 
Sbjct: 22 GTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFR-HPHIIKLYQVI 80

Query: 75 ESSHDMILLLE 85
           +  D  +++E
Sbjct: 81 STPTDFFMVME 91

>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe} Length = 336

 Score = 40.7 bits (96), Expect = 4e-05
 Identities = 15/71 (21%), Positives = 38/71 (53%), Gaps = 2/71 (2%)

Query: 16 GKYATVRRCRDRKNGTQYAAKFLRKKR-RSTDLKAEILHEVAVLEACRCNSRIVQLHQVF 74
          G +  V+     K   + A KF+ ++  + +D+   +  E++ L+  R +  I++L+ V 
Sbjct: 20 GSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLR-HPHIIKLYDVI 78

Query: 75 ESSHDMILLLE 85
           +  D+++++E
Sbjct: 79 TTPTDIVMVIE 89

>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A Length = 377

 Score = 40.0 bits (93), Expect = 6e-05
 Identities = 11/73 (15%), Positives = 25/73 (34%), Gaps = 3/73 (4%)

Query: 16  GKYATVRRCRDRKNGTQYAAKFLRK-KRRSTDLKAEILHEVAVLEACR--CNSRIVQLHQ 72
                     D++ G  +        +R  ++   ++  EV  L   R   N +  ++H 
Sbjct: 84  EDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHL 143

Query: 73  VFESSHDMILLLE 85
            F    D++   +
Sbjct: 144 RFIFPFDLVKDPQ 156

>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} Length = 413

 Score = 40.0 bits (93), Expect = 7e-05
 Identities = 11/69 (15%), Positives = 24/69 (34%), Gaps = 3/69 (4%)

Query: 16  GKYATVRRCRDRKNGTQYAAKFLRK-KRRSTDLKAEILHEVAVLEACR--CNSRIVQLHQ 72
                     D++ G  +        +R  ++   ++  EV  L   R   N +  ++H 
Sbjct: 89  EDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHL 148

Query: 73  VFESSHDMI 81
            F    D++
Sbjct: 149 RFIFPFDLV 157

>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A* Length = 434

 Score = 39.8 bits (93), Expect = 7e-05
 Identities = 12/71 (16%), Positives = 24/71 (33%), Gaps = 6/71 (8%)

Query: 16 GKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFE 75
          G   TV   +    G   A K +             L E+ +L     +  +++ +    
Sbjct: 26 GSSGTVV-FQGSFQGRPVAVKRMLIDFCDI-----ALMEIKLLTESDDHPNVIRYYCSET 79

Query: 76 SSHDMILLLEL 86
          +   + + LEL
Sbjct: 80 TDRFLYIALEL 90

>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ... Length = 276

 Score = 39.5 bits (93), Expect = 9e-05
 Identities = 14/70 (20%), Positives = 27/70 (38%), Gaps = 2/70 (2%)

Query: 16 GKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFE 75
          G Y  V+   +R      A K +   +R+ D    I  E+ + +    +  +V+ +    
Sbjct: 18 GAYGEVQLAVNRVTEEAVAVKIV-DMKRAVDCPENIKKEICINKMLN-HENVVKFYGHRR 75

Query: 76 SSHDMILLLE 85
            +   L LE
Sbjct: 76 EGNIQYLFLE 85

>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens} Length = 337

 Score = 39.4 bits (92), Expect = 9e-05
 Identities = 18/77 (23%), Positives = 30/77 (38%), Gaps = 9/77 (11%)

Query: 16  GKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLH---- 71
           G +A V   +D  +G +YA K L       +    I+ EV  ++    +  IVQ      
Sbjct: 39  GGFAFVYEAQDVGSGREYALKRLLSN--EEEKNRAIIQEVCFMKKLSGHPNIVQFCSAAS 96

Query: 72  ---QVFESSHDMILLLE 85
              +  ++     LLL 
Sbjct: 97  IGKEESDTGQAEFLLLT 113

>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A* Length = 299

 Score = 39.3 bits (92), Expect = 1e-04
 Identities = 12/65 (18%), Positives = 26/65 (40%), Gaps = 2/65 (3%)

Query: 16 GKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFE 75
          G +  V   +++ +   YA K +R   R    + +++ EV  L     +  IV+    + 
Sbjct: 16 GGFGVVFEAKNKVDDCNYAIKRIRLPNRELA-REKVMREVKALAKLE-HPGIVRYFNAWL 73

Query: 76 SSHDM 80
            +  
Sbjct: 74 EKNTT 78

>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A Length = 361

 Score = 39.3 bits (92), Expect = 1e-04
 Identities = 12/70 (17%), Positives = 29/70 (41%), Gaps = 4/70 (5%)

Query: 16 GKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFE 75
          G +   R  RD+      A K++ +      +   +  E+    + R +  IV+  +V  
Sbjct: 31 GNFGVARLMRDKLTKELVAVKYIERGAA---IDENVQREIINHRSLR-HPNIVRFKEVIL 86

Query: 76 SSHDMILLLE 85
          +   + +++E
Sbjct: 87 TPTHLAIIME 96

>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens} Length = 317

 Score = 38.9 bits (91), Expect = 1e-04
 Identities = 14/75 (18%), Positives = 26/75 (34%), Gaps = 7/75 (9%)

Query: 16  GKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVF- 74
           G ++ V       +G  YA K +    +    + E   E  +      +  I++L     
Sbjct: 40  GGFSYVDLVEGLHDGHFYALKRILCHEQQD--REEAQREADMHRLFN-HPNILRLVAYCL 96

Query: 75  ---ESSHDMILLLEL 86
               + H+  LLL  
Sbjct: 97  RERGAKHEAWLLLPF 111

>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus} Length = 476

 Score = 39.0 bits (91), Expect = 1e-04
 Identities = 19/71 (26%), Positives = 39/71 (54%), Gaps = 2/71 (2%)

Query: 16 GKYATVRRCRDRKNGTQYAAKFLRKKR-RSTDLKAEILHEVAVLEACRCNSRIVQLHQVF 74
          G +  V+  +    G + A K L +++ RS D+  +I  E+  L+  R +  I++L+QV 
Sbjct: 27 GTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFR-HPHIIKLYQVI 85

Query: 75 ESSHDMILLLE 85
           +  D+ +++E
Sbjct: 86 STPSDIFMVME 96

>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A* Length = 323

 Score = 38.8 bits (91), Expect = 2e-04
 Identities = 14/70 (20%), Positives = 27/70 (38%), Gaps = 2/70 (2%)

Query: 16 GKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFE 75
          G Y  V+   +R      A K +   +R+ D    I  E+ + +    +  +V+ +    
Sbjct: 18 GAYGEVQLAVNRVTEEAVAVKIV-DMKRAVDCPENIKKEICINKMLN-HENVVKFYGHRR 75

Query: 76 SSHDMILLLE 85
            +   L LE
Sbjct: 76 EGNIQYLFLE 85

>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A* Length = 576

 Score = 38.2 bits (89), Expect = 2e-04
 Identities = 26/74 (35%), Positives = 39/74 (52%), Gaps = 4/74 (5%)

Query: 16  GKYATVRRCRDRKNGTQYAAKFLRKKR-RSTDLKAEILHEVAVLEACRCNSR-IVQLHQV 73
           G +  V  C+ R  G  YA K L KKR +    +A  L+E  +LE  + NSR +V L   
Sbjct: 195 GGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILE--KVNSRFVVSLAYA 252

Query: 74  FESSHDMILLLELL 87
           +E+   + L+L L+
Sbjct: 253 YETKDALCLVLTLM 266

>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens} Length = 305

 Score = 38.0 bits (89), Expect = 2e-04
 Identities = 20/74 (27%), Positives = 36/74 (48%), Gaps = 5/74 (6%)

Query: 16 GKYATVRRCRDRKNGTQYAAKFLRKKR--RSTDLKAEILHEVAVLEACRCNSRIVQLHQV 73
          G Y  V+   D +   + A K L+KK+  R  + +A +  E+ +L   R +  ++QL  V
Sbjct: 16 GSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLR-HKNVIQLVDV 74

Query: 74 --FESSHDMILLLE 85
             E    M +++E
Sbjct: 75 LYNEEKQKMYMVME 88

>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A* Length = 327

 Score = 37.7 bits (88), Expect = 4e-04
 Identities = 16/73 (21%), Positives = 32/73 (43%), Gaps = 3/73 (4%)

Query: 16  GKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSR-IVQLHQVF 74
           G Y +V +   + +G   A K +R      + K ++L ++ V+     +   IVQ +   
Sbjct: 33  GAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQK-QLLMDLDVVMRS-SDCPYIVQFYGAL 90

Query: 75  ESSHDMILLLELL 87
               D  + +EL+
Sbjct: 91  FREGDCWICMELM 103

>3pvu_A Beta-adrenergic receptor kinase 1; transferase, serine/threonine-protein kinase, ATP-binding, I membrane; HET: QRW; 2.48A {Bos taurus} PDB: 3psc_A* 3pvw_A* 1omw_A 1ym7_A 2bcj_A* 3cik_A 3krw_A* 3krx_A* 1bak_A Length = 695

 Score = 37.6 bits (87), Expect = 5e-04
 Identities = 20/75 (26%), Positives = 31/75 (41%), Gaps = 3/75 (4%)

Query: 16  GKYATVRRCRDRKNGTQYAAKFLRKKR-RSTDLKAEILHEVAVLEACRCNSR--IVQLHQ 72
           G +  V  CR    G  YA K L KKR +    +   L+E  +L          IV +  
Sbjct: 200 GGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSY 259

Query: 73  VFESSHDMILLLELL 87
            F +   +  +L+L+
Sbjct: 260 AFHTPDKLSFILDLM 274

>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A Length = 373

 Score = 37.0 bits (86), Expect = 6e-04
 Identities = 18/94 (19%), Positives = 37/94 (39%), Gaps = 21/94 (22%)

Query: 11  IINDMGK--YATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNS--- 65
           ++  +G   ++TV   +D  N T  A K +R  +  T+       E+ +L+         
Sbjct: 23  LVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYTE---AAEDEIKLLQRVNDADNTK 79

Query: 66  -------RIVQLHQVFE-----SSHDMILLLELL 87
                   I++L   F        H ++++ E+L
Sbjct: 80  EDSMGANHILKLLDHFNHKGPNGVH-VVMVFEVL 112

>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X* Length = 348

 Score = 37.0 bits (86), Expect = 7e-04
 Identities = 11/85 (12%), Positives = 27/85 (31%), Gaps = 18/85 (21%)

Query: 16  GKYATVRRCRDRKNGTQYAAKFLRKKR---------------RSTDLKAEILHEVAVLEA 60
           GK+  +  C   K+   YA K   K                        +  +E+ ++  
Sbjct: 42  GKFNKIILCE--KDNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITD 99

Query: 61  CRCNSRIVQLHQVFESSHDMILLLE 85
            + N   +    +  +  ++ ++ E
Sbjct: 100 IK-NEYCLTCEGIITNYDEVYIIYE 123

>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B Length = 543

 Score = 36.7 bits (85), Expect = 8e-04
 Identities = 22/74 (29%), Positives = 36/74 (48%), Gaps = 4/74 (5%)

Query: 16  GKYATVRRCRDRKNGTQYAAKFLRKKR-RSTDLKAEILHEVAVLEACRCNSR-IVQLHQV 73
           G +  V  C+ +  G  YA K L KKR +        + E  +L   + +SR IV L   
Sbjct: 196 GGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILA--KVHSRFIVSLAYA 253

Query: 74  FESSHDMILLLELL 87
           FE+  D+ L++ ++
Sbjct: 254 FETKTDLCLVMTIM 267

>1uu3_A HPDK1, 3-phosphoinositide dependent protein kinase-1; PKB, inhibitor, LY333531, diabetes, cancer, transferase, serine/threonine-protein kinase; HET: SEP LY4; 1.7A {Homo sapiens} SCOP: d.144.1.7 PDB: 1okz_A* 1oky_A* 1uu7_A* 1uu8_A* 2biy_A* 3rwp_A* 2xch_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* ... Length = 310

 Score = 36.4 bits (85), Expect = 9e-04
 Identities = 16/71 (22%), Positives = 29/71 (40%), Gaps = 2/71 (2%)

Query: 16  GKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAE-ILHEVAVLEACRCNSRIVQLHQVF 74
           G ++TV   R+     +YA K L K+    + K   +  E  V+     +   V+L+  F
Sbjct: 41  GSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLD-HPFFVKLYFTF 99

Query: 75  ESSHDMILLLE 85
           +    +   L 
Sbjct: 100 QDDEKLYFGLS 110

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	126
4b9d_A	350	Serine/threonine-protein kinase NEK1; transferase,	99.98
4aw0_A	311	HPDK1, 3-phosphoinositide-dependent protein kinase	99.97
3hyh_A	275	Carbon catabolite-derepressing protein kinase; kin	99.97
3fpq_A	290	Serine/threonine-protein kinase WNK1; protein seri	99.97
4g3f_A	336	NF-kappa-beta-inducing kinase; non-RD kinase, prot	99.96
4fih_A	346	Serine/threonine-protein kinase PAK 4; kinase doma	99.96
3ubd_A	304	Ribosomal protein S6 kinase alpha-3; kinase-inhibi	99.96
4fie_A	423	Serine/threonine-protein kinase PAK 4; kinase doma	99.96
4asz_A	299	BDNF/NT-3 growth factors receptor; transferase, TR	99.96
4b99_A	398	Mitogen-activated protein kinase 7; transferase, i	99.96
4aoj_A	329	High affinity nerve growth factor receptor; transf	99.95
4g31_A	299	Eukaryotic translation initiation factor 2-alpha;	99.95
4gt4_A	308	Tyrosine-protein kinase transmembrane receptor RO;	99.95
3v5w_A	689	G-protein coupled receptor kinase 2; inhibitor com	99.95
3uto_A	573	Twitchin; kinase, muscle sarcomere, transferase; H	99.94
3omv_A	307	RAF proto-oncogene serine/threonine-protein kinas;	99.94
3fe3_A	328	MAP/microtubule affinity-regulating kinase 3; seri	99.94
4ase_A	353	Vascular endothelial growth factor receptor 2; tra	99.94
4f9c_A	361	Cell division cycle 7-related protein kinase; Ser/	99.93
2bdw_A	362	Hypothetical protein K11E8.1D; kinase, calmodulin	99.93
3uc3_A	361	Serine/threonine-protein kinase SRK2I; SNRK2, ABA	99.92
2yab_A	361	Death-associated protein kinase 2; apoptosis, tran	99.92
3gni_B	389	Strad alpha; kinase fold, pseudokinase, alpha heli	99.92
3a8x_A	345	Protein kinase C IOTA type; transferase; HET: TPO;	99.92
3soa_A	444	Calcium/calmodulin-dependent protein kinase type a	99.92
1o6l_A	337	RAC-beta serine/threonine protein kinase; protein	99.92
3zgw_A	347	Maternal embryonic leucine zipper kinase; transfer	99.92
3o0g_A	292	Cell division protein kinase 5; kinase activator c	99.92
3txo_A	353	PKC-L, NPKC-ETA, protein kinase C ETA type; phosph	99.92
4dc2_A	396	Protein kinase C IOTA type; kinase, substrate, cel	99.92
2y0a_A	326	Death-associated protein kinase 1; transferase, ca	99.92
4eqm_A	294	Protein kinase; transferase; HET: ANP; 3.00A {Stap	99.92
3hmm_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	99.92
4fr4_A	384	YANK1, serine/threonine-protein kinase 32A; struct	99.92
1fot_A	318	TPK1 delta, CAMP-dependent protein kinase type 1;	99.92
4agu_A	311	Cyclin-dependent kinase-like 1; transferase, phosp	99.91
1xjd_A	345	Protein kinase C, theta type; PKC-theta, ATP, AMP,	99.91
3s95_A	310	LIMK-1, LIM domain kinase 1; structural genomics,	99.91
3mwu_A	486	Calmodulin-domain protein kinase 1; serine/threoni	99.91
1rdq_E	350	PKA C-alpha, CAMP-dependent protein kinase, alpha-	99.91
3kk8_A	284	Calcium/calmodulin dependent protein kinase II; AT	99.91
3q5i_A	504	Protein kinase; CDPK, malaria, phosphotransferase,	99.91
4aaa_A	331	Cyclin-dependent kinase-like 2; transferase, phosp	99.91
1x8b_A	289	WEE1HU, WEE1-like protein kinase; cell cycle, tran	99.91
3lij_A	494	Calcium/calmodulin dependent protein kinase with A	99.91
3gbz_A	329	Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-	99.91
3kn6_A	325	Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1	99.91
2i0e_A	353	Protein kinase C-beta II; serine/threonine protein	99.91
2y94_A	476	5'-AMP-activated protein kinase catalytic subunit;	99.91
3fxz_A	297	Serine/threonine-protein kinase PAK 1; transferase	99.91
3tki_A	323	Serine/threonine-protein kinase CHK1; cell checkpo	99.91
1tki_A	321	Titin; serine kinase, muscle, autoinhibition; 2.00	99.91
3h4j_B	336	AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin	99.91
3uqc_A	286	Probable conserved transmembrane protein; structur	99.91
2ac3_A	316	MAP kinase-interacting serine/threonine kinase 2;	99.91
2qr7_A	342	Ribosomal protein S6 kinase alpha-3; kinase domain	99.9
3nyv_A	484	Calmodulin-domain protein kinase 1; serine/threoni	99.9
2a2a_A	321	Death-associated protein kinase 2; autoinhibition,	99.9
4aw2_A	437	Serine/threonine-protein kinase MRCK alpha; transf	99.9
3bhy_A	283	Death-associated protein kinase 3; death associate	99.9
1t4h_A	290	Serine/threonine-protein kinase WNK1; protein seri	99.9
3v8s_A	410	RHO-associated protein kinase 1; dimerization, myo	99.9
3fdn_A	279	Serine/threonine-protein kinase 6; aurora kinase i	99.9
3c0i_A	351	Peripheral plasma membrane protein CASK; neurexin,	99.9
3p86_A	309	Serine/threonine-protein kinase CTR1; ETR1, ERS1,	99.9
2vd5_A	412	DMPK protein; serine/threonine-protein kinase, kin	99.9
2rku_A	294	Serine/threonine-protein kinase PLK1; structure of	99.9
2r5t_A	373	Serine/threonine-protein kinase SGK1; AGC protein	99.9
2owb_A	335	Serine/threonine-protein kinase PLK1; catalytic do	99.9
3a62_A	327	Ribosomal protein S6 kinase beta-1; kinase domain,	99.9
2wei_A	287	Calmodulin-domain protein kinase 1, putative; nucl	99.9
2h34_A	309	Serine/threonine-protein kinase PKNE; apoenzyme, t	99.9
3ork_A	311	Serine/threonine protein kinase; structural genomi	99.9
3f3z_A	277	Calcium/calmodulin-dependent protein kinase with d	99.9
3rp9_A	458	Mitogen-activated protein kinase; structural genom	99.9
3niz_A	311	Rhodanese family protein; structural genomics, str	99.9
4euu_A	319	Serine/threonine-protein kinase TBK1; ATP binding,	99.9
3n9x_A	432	Phosphotransferase; malaria kinase, structural gen	99.9
1phk_A	298	Phosphorylase kinase; glycogen metabolism, transfe	99.9
2vgo_A	284	Serine/threonine-protein kinase 12-A; nucleotide-b	99.9
2eue_A	275	Carbon catabolite derepressing protein kinase; kin	99.9
3qd2_B	332	Eukaryotic translation initiation factor 2-alpha;	99.9
2w4o_A	349	Calcium/calmodulin-dependent protein kinase type I	99.9
2jam_A	304	Calcium/calmodulin-dependent protein kinase type 1	99.9
3kmu_A	271	ILK, integrin-linked kinase; cell adhesion, ANK re	99.89
3is5_A	285	Calcium-dependent protein kinase; CDPK, structural	99.89
1kob_A	387	Twitchin; kinase, intrasteric regulation; 2.30A {A	99.89
2h6d_A	276	5'-AMP-activated protein kinase catalytic subunit	99.89
2wqm_A	310	Serine/threonine-protein kinase NEK7; ATP-binding,	99.89
3lm5_A	327	Serine/threonine-protein kinase 17B; STK17B, serin	99.89
4ejn_A	446	RAC-alpha serine/threonine-protein kinase; AKT1, a	99.89
3cok_A	278	Serine/threonine-protein kinase PLK4; POLO-like ki	99.89
2pmi_A	317	Negative RE, cyclin-dependent protein kinase PHO85	99.89
2acx_A	576	G protein-coupled receptor kinase 6; GRK, G transf	99.89
2w5a_A	279	Serine/threonine-protein kinase NEK2; Ser/Thr prot	99.89
2zmd_A	390	Dual specificity protein kinase TTK; MPS1, T686A,	99.89
2x4f_A	373	Myosin light chain kinase family member 4; LUNG, b	99.89
3cbl_A	377	C-FES, proto-oncogene tyrosine-protein kinase FES/	99.89
3vhe_A	359	Vascular endothelial growth factor receptor 2; kin	99.89
3kul_A	325	Ephrin type-A receptor 8; ATP-binding, kinase, nuc	99.89
3mi9_A	351	Cell division protein kinase 9; P-TEFB, HIV-1, pro	99.89
4fvq_A	289	Tyrosine-protein kinase JAK2; janus protein kinase	99.89
1ob3_A	288	PFPK5, cell division control protein 2 homolog; tr	99.89
3dbq_A	343	Dual specificity protein kinase TTK; MPS1 structur	99.89
2yex_A	276	Serine/threonine-protein kinase CHK1; transferase,	99.89
2qol_A	373	Ephrin receptor; receptor tyrosine kinase, juxtame	99.89
3c4z_A	543	Rhodopsin kinase; Ser/Thr kinase, RGS homology dom	99.89
3eqc_A	360	Dual specificity mitogen-activated protein kinase;	99.89
3pfq_A	674	PKC-B, PKC-beta, protein kinase C beta type; phosp	99.89
4eut_A	396	Serine/threonine-protein kinase TBK1; ATP binding,	99.89
1xbb_A	291	Tyrosine-protein kinase SYK; gleevec, STI-571, ima	99.89
3i6u_A	419	CDS1, serine/threonine-protein kinase CHK2; Ser/Th	99.89
2r3i_A	299	Cell division protein kinase 2; serine/threonine-p	99.89
3l9p_A	367	Anaplastic lymphoma kinase; kinase domain, ATP-bin	99.88
4hcu_A	269	Tyrosine-protein kinase ITK/TSK; transferase-trans	99.88
1vzo_A	355	Ribosomal protein S6 kinase alpha 5; protein kinas	99.88
3dls_A	335	PAS domain-containing serine/threonine-protein KI;	99.88
2zv2_A	298	Calcium/calmodulin-dependent protein kinase kinas;	99.88
1u5q_A	348	Serine/threonine protein kinase TAO2; transferase;	99.88
2psq_A	370	Fibroblast growth factor receptor 2; kinase domain	99.88
1luf_A	343	Muscle-specific tyrosine kinase receptor MUSK; pho	99.88
3gen_A	283	Tyrosine-protein kinase BTK; bruton'S tyrosine kin	99.88
2c30_A	321	Serine/threonine-protein kinase PAK 6; CRIB domain	99.88
2ycf_A	322	Serine/threonine-protein kinase CHK2; transferase,	99.88
3kfa_A	288	Tyrosine-protein kinase ABL1; CML, drug resistance	99.88
2y7j_A	365	Phosphorylase B kinase gamma catalytic chain, test	99.88
2j7t_A	302	Serine/threonine-protein kinase 10; transferase, A	99.88
3p1a_A	311	MYT1 kinase, membrane-associated tyrosine- and thr	99.88
1opk_A	495	P150, C-ABL, proto-oncogene tyrosine-protein kinas	99.88
1cm8_A	367	Phosphorylated MAP kinase P38-gamma; phosphorylati	99.88
2buj_A	317	Serine/threonine-protein kinase 16; transferase, A	99.88
3a7i_A	303	MST3 kinase, serine/threonine kinase 24 (STE20 hom	99.88
1nxk_A	400	MAP kinase-activated protein kinase 2; MK2, phosph	99.88
4fl3_A	635	Tyrosine-protein kinase SYK; transferase; HET: ANP	99.88
2ivs_A	314	Proto-oncogene tyrosine-protein kinase receptor RE	99.88
1fvr_A	327	Tyrosine-protein kinase TIE-2; tyrosine kinase, tr	99.88
3sxs_A	268	Cytoplasmic tyrosine-protein kinase BMX; transfera	99.88
4e5w_A	302	Tyrosine-protein kinase JAK1; kinase domain, trans	99.88
3ttj_A	464	Mitogen-activated protein kinase 10; JNK3, protein	99.88
3qup_A	323	Tyrosine-protein kinase receptor TYRO3; protein ki	99.88
3oz6_A	388	Mitogen-activated protein kinase 1, serine/threon	99.88
2izr_A	330	Casein kinase I isoform gamma-3; serine/threonine-	99.88
3tt0_A	382	Basic fibroblast growth factor receptor 1; kinase	99.88
3hko_A	345	Calcium/calmodulin-dependent protein kinase with d	99.88
3ugc_A	295	Tyrosine-protein kinase JAK2; small molecule inhib	99.87
2xrw_A	371	Mitogen-activated protein kinase 8; transcription,	99.87
1t46_A	313	HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom	99.87
2yfx_A	327	Tyrosine-protein kinase receptor; nucleotide-bindi	99.87
2clq_A	295	Mitogen-activated protein kinase kinase kinase 5;	99.87
2pvf_A	334	Fibroblast growth factor receptor 2; kinase domain	99.87
2x7f_A	326	TRAF2 and NCK-interacting protein kinase; serine/t	99.87
3com_A	314	Serine/threonine-protein kinase 4; MST1, STE20-lik	99.87
3nsz_A	330	CK II alpha, casein kinase II subunit alpha; inhib	99.87
3t9t_A	267	Tyrosine-protein kinase ITK/TSK; kinase domain, al	99.87
3cek_A	313	Dual specificity protein kinase TTK; HMPS1, PYT, E	99.87
1rjb_A	344	FL cytokine receptor; kinase, structure, autoinhib	99.87
3m2w_A	299	MAP kinase-activated protein kinase 2; small molec	99.87
1mqb_A	333	Ephrin type-A receptor 2; tyrosine protein kinase,	99.87
1zy4_A	303	Serine/threonine-protein kinase GCN2; translation	99.87
4f0f_A	287	Serine/threonine-protein kinase ROCO4; LRRK2, ATP-	99.87
2vwi_A	303	Serine/threonine-protein kinase OSR1; STE kinase,	99.87
3fme_A	290	Dual specificity mitogen-activated protein kinase;	99.87
3brb_A	313	Proto-oncogene tyrosine-protein kinase MER; ATP-bi	99.87
1k9a_A	450	Carboxyl-terminal SRC kinase; COOH-terminal SRC ki	99.86
3lxl_A	327	Tyrosine-protein kinase JAK3; TYK2, inflammation,	99.86
3llt_A	360	Serine/threonine kinase-1, pflammer; lammer kinase	99.86
3e7e_A	365	HBUB1, BUB1A, mitotic checkpoint serine/threonine-	99.86
2a19_B	284	Interferon-induced, double-stranded RNA-activated	99.86
3dtc_A	271	Mitogen-activated protein kinase kinase kinase 9;	99.86
2xir_A	316	Vascular endothelial growth factor receptor 2; ang	99.86
2i1m_A	333	Macrophage colony-stimulating factor 1 receptor; k	99.86
3mtl_A	324	Cell division protein kinase 16; pctaire1, indirub	99.86
2fst_X	367	Mitogen-activated protein kinase 14; active mutant	99.86
4exu_A	371	Mitogen-activated protein kinase 13; P38 kinase, t	99.86
2vuw_A	336	Serine/threonine-protein kinase haspin; cell cycle	99.86
3g33_A	308	Cell division protein kinase 4; Ser/Thr protein ki	99.86
3eb0_A	383	Putative uncharacterized protein; kinase cryptospo	99.86
3an0_A	340	Dual specificity mitogen-activated protein kinase;	99.86
3soc_A	322	Activin receptor type-2A; structural genomics cons	99.86
2pml_X	348	PFPK7, Ser/Thr protein kinase; phosphorylati trans	99.85
1csn_A	298	Casein kinase-1; phosphotransferase; HET: ATP; 2.0	99.85
2i6l_A	320	Mitogen-activated protein kinase 6; MAPK6, ERK3, e	99.85
1mp8_A	281	Focal adhesion kinase 1; tyrosine protein kinase,	99.85
3a99_A	320	Proto-oncogene serine/threonine-protein kinase PI;	99.85
1p4o_A	322	Insulin-like growth factor I receptor protein; IGF	99.85
2qkw_B	321	Protein kinase; three-helix bundle motif, AVRPTO-P	99.85
2nru_A	307	Interleukin-1 receptor-associated kinase 4; inhibi	99.85
3coi_A	353	Mitogen-activated protein kinase 13; P38D, P38delt	99.85
3lxp_A	318	Non-receptor tyrosine-protein kinase TYK2; JAK3, i	99.85
1qcf_A	454	Haematopoetic cell kinase (HCK); tyrosine kinase-i	99.85
1u59_A	287	Tyrosine-protein kinase ZAP-70; transferase; HET:	99.85
1ua2_A	346	CAK, cell division protein kinase 7; cell cycle, p	99.85
2w1i_A	326	JAK2; chromosomal rearrangement, nucleotide-bindin	99.85
1fmk_A	452	C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros	99.85
2wtk_C	305	Serine/threonine-protein kinase 11; transferase-me	99.85
2iwi_A	312	Serine/threonine-protein kinase PIM-2; nucleotide-	99.85
3pls_A	298	Macrophage-stimulating protein receptor; protein k	99.85
3poz_A	327	Epidermal growth factor receptor; kinase domain, a	99.85
2h8h_A	535	Proto-oncogene tyrosine-protein kinase SRC; SRC ki	99.84
3qyz_A	364	Mitogen-activated protein kinase 1; transferase, s	99.84
3lb7_A	307	RAF proto-oncogene serine/threonine-protein kinas;	99.84
3ll6_A	337	Cyclin G-associated kinase; transferase, protein k	99.84
2ozo_A	613	Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t	99.84
3og7_A	289	AKAP9-BRAF fusion protein; proto-oncogene, V600E,	99.84
1qpc_A	279	LCK kinase; alpha beta fold, transferase; HET: PTR	99.84
3cc6_A	281	Protein tyrosine kinase 2 beta; focal adhesion kin	99.84
3byv_A	377	Rhoptry kinase; malaria, transferase, structural g	99.84
3f66_A	298	Hepatocyte growth factor receptor; C-Met, protein	99.84
3pg1_A	362	Mitogen-activated protein kinase, putative (MAP K	99.84
3fhr_A	336	MAP kinase-activated protein kinase 3; kinase-inhi	99.84
2b9h_A	353	MAP kinase FUS3, mitogen-activated protein kinase	99.84
3uim_A	326	Brassinosteroid insensitive 1-associated receptor;	99.84
3aln_A	327	Dual specificity mitogen-activated protein kinase;	99.84
1blx_A	326	Cyclin-dependent kinase 6; inhibitor protein, cycl	99.84
2dyl_A	318	Dual specificity mitogen-activated protein kinase	99.84
1wak_A	397	Serine/threonine-protein kinase SPRK1; SRPK, trans	99.84
2v62_A	345	Serine/threonine-protein kinase VRK2; transferase,	99.83
3uzp_A	296	CKI-delta, CKID, casein kinase I isoform delta; CK	99.83
1byg_A	278	CSK, protein (C-terminal SRC kinase); protein kina	99.83
2jii_A	352	Serine/threonine-protein kinase VRK3 molecule: VA	99.83
3lzb_A	327	Epidermal growth factor receptor; epidermal growth	99.83
3rgf_A	405	Cyclin-dependent kinase 8; protein kinase complex,	99.83
3op5_A	364	Serine/threonine-protein kinase VRK1; adenosine tr	99.83
2pzi_A	681	Probable serine/threonine-protein kinase PKNG; ATP	99.83
1z57_A	339	Dual specificity protein kinase CLK1; protein tyro	99.83
2y4i_B	319	KSR2, HKSR2, kinase suppressor of RAS 2; transfera	99.83
3kvw_A	429	DYRK2, dual specificity tyrosine-phosphorylation-r	99.82
3kex_A	325	Receptor tyrosine-protein kinase ERBB-3; kinase do	99.82
1j1b_A	420	Glycogen synthase kinase-3 beta; complex, TAU, AMP	99.82
4hgt_A	296	Casein kinase I isoform delta; CK1D, inhibitor, tr	99.82
2eva_A	307	TAK1 kinase - TAB1 chimera fusion protein; transfe	99.82
3c1x_A	373	Hepatocyte growth factor receptor; receptor tyrosi	99.82
3sv0_A	483	Casein kinase I-like; typical kinase domain fold,	99.82
1u46_A	291	ACK-1, activated CDC42 kinase 1; tyrosine kinase,	99.82
3e3p_A	360	Protein kinase, putative glycogen synthase kinase;	99.82
3qa8_A	676	MGC80376 protein; kinase ubiquitin-like domain, ph	99.82
3q4u_A	301	Activin receptor type-1; structural genomics conso	99.82
2j0j_A	656	Focal adhesion kinase 1; cell migration, FERM, tra	99.81
1b6c_B	342	TGF-B superfamily receptor type I; complex (isomer	99.81
1q8y_A	373	SR protein kinase; transferase; HET: ADP ADE; 2.05	99.81
3q60_A	371	ROP5B; pseudokinase, transferase; HET: ATP; 1.72A	99.8
3gxj_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	99.8
2vx3_A	382	Dual specificity tyrosine-phosphorylation- regula	99.8
3mdy_A	337	Bone morphogenetic protein receptor type-1B; compl	99.8
2eu9_A	355	Dual specificity protein kinase CLK3; kinase domai	99.8
4e7w_A	394	Glycogen synthase kinase 3; GSK3, PTyr195, transfe	99.79
3g2f_A	336	Bone morphogenetic protein receptor type-2; kinase	99.79
2rio_A	434	Serine/threonine-protein kinase/endoribonuclease I	99.78
3p23_A	432	Serine/threonine-protein kinase/endoribonuclease;	99.77
4azs_A	569	Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15	99.77
3en9_A	540	Glycoprotease, O-sialoglycoprotein endopeptidase/p	99.71
1zar_A	282	RIO2 kinase; serine kinase, winged-helix, RIO doma	99.67
3dzo_A	413	Rhoptry kinase domain; parasitic disease, transfer	99.6
1zth_A	258	RIO1 serine protein kinase; ribosome biogenesis, r	99.51
4gyi_A	397	RIO2 kinase; protein kinase, ADP complex, phosphoa	99.33
3tm0_A	263	Aminoglycoside 3'-phosphotransferase; protein kina	98.95
1nd4_A	264	Aminoglycoside 3'-phosphotransferase; protein kina	98.45
3dxp_A	359	Putative acyl-COA dehydrogenase; protein kinase-li	98.32
4gkh_A	272	Aminoglycoside 3'-phosphotransferase APHA1-IAB; py	98.24
3r70_A	320	Aminoglycoside phosphotransferase; structural geno	98.06
3d1u_A	288	Putative fructosamine-3-kinase; YP_290396.1, struc	98.05
3tdw_A	306	Gentamicin resistance protein; kinase, phosphoryl	97.91
3sg8_A	304	APH(2'')-ID; antibiotic resistance enzyme, transfe	97.66
3jr1_A	312	Putative fructosamine-3-kinase; YP_719053.1, struc	97.62
3ovc_A	362	Hygromycin-B 4-O-kinase; aminoglycoside phosphotra	97.49
2olc_A	397	MTR kinase, methylthioribose kinase; kinase ADP-2H	97.12
3ats_A	357	Putative uncharacterized protein; hypothetical pro	97.0
3f7w_A	288	Putative fructosamine-3-kinase; YP_290396.1, struc	95.63
3feg_A	379	Choline/ethanolamine kinase; non-protein kinase, c	94.85
2pyw_A	420	Uncharacterized protein; 5-methylthioribose kinase	94.31
3cxl_A	463	N-chimerin; SH2, RHO-GAP, structural genomics cons	94.15
1nw1_A	429	Choline kinase (49.2 KD); phospholipid synthesis,	93.61
2q83_A	346	YTAA protein; 2635576, structural genomics, joint	93.56
3csv_A	333	Aminoglycoside phosphotransferase; YP_614837.1, ph	92.49
1zyl_A	328	Hypothetical protein YIHE; putative protein kinase	92.33
2qg7_A	458	Ethanolamine kinase PV091845; malaria, SGC, struct	90.92
3dxq_A	301	Choline/ethanolamine kinase family protein; NP_106	88.6
2ppq_A	322	HSK, HK, homoserine kinase; structural genomics, M	87.82
3c5i_A	369	Choline kinase; choline, kinase, malaria, transfer	86.21
3mes_A	424	Choline kinase; malaria, structural genomics, stru	85.51
3i1a_A	339	Spectinomycin phosphotransferase; protein kinase,	81.66

>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*

Probab=99.98  E-value=3.3e-31  Score=173.79  Aligned_cols=124  Identities=16%  Similarity=0.187  Sum_probs=106.9

Q ss_pred             cccccccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeEE
Q psy8006           2 NNIKNIISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMI   81 (126)
Q Consensus         2 ~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~~   81 (126)
                      +.+++|...+.||+|+||.||+|.+..+|+.||+|++............+.+|+.++++++| ||||++++++.+++.+|
T Consensus        21 ~sme~Y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~H-pnIV~~~~~~~~~~~~y   99 (350)
T 4b9d_A           21 QSMEKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKH-PNIVQYRESFEENGSLY   99 (350)
T ss_dssp             SCCCCEEEEEEC------CEEEEEETTTCCEEEEEEEECTTSCHHHHHHHHHHHHHHHHCCC-TTBCCEEEEEEETTEEE
T ss_pred             CcccceEEeEEEecCCCeEEEEEEECCCCCEEEEEEEehHHCCHHHHHHHHHHHHHHHHCCC-CCCCcEEEEEEECCEEE
Confidence            35678999999999999999999999999999999999877666656679999999999998 99999999999999999


Q ss_pred             EEEeccCcccHHHHHHhc--CCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          82 LLLELLTSAVDSKIRESF--GSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        82 lv~e~~~~~~L~~~~~~~--~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      |||||+++|+|.+++..+  ..+++..++.++.|++.||+|||+.++
T Consensus       100 iVmEy~~gg~L~~~i~~~~~~~~~e~~~~~~~~qi~~aL~ylH~~~I  146 (350)
T 4b9d_A          100 IVMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHVHDRKI  146 (350)
T ss_dssp             EEEECCTTCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred             EEEeCCCCCcHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence            999999999999998653  357999999999999999999999875

>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...

Probab=99.97  E-value=3.5e-31  Score=171.28  Aligned_cols=122  Identities=18%  Similarity=0.158  Sum_probs=110.6

Q ss_pred             cccccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCC-chhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeEEE
Q psy8006           4 IKNIISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRS-TDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMIL   82 (126)
Q Consensus         4 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~-~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~~l   82 (126)
                      .++|...+.||+|+||.||+|.+..+++.||+|++.+.... ......+.+|+.+++.++| ||||++++++.+++.+|+
T Consensus        31 ~~dy~i~~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~H-pnIv~l~~~~~~~~~~yi  109 (311)
T 4aw0_A           31 PEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH-PFFVKLYFTFQDDEKLYF  109 (311)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCC-TTBCCEEEEEECSSEEEE
T ss_pred             ccccEEEEEEecccCeEEEEEEECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHhCCC-CCCCeEEEEEEeCCEEEE
Confidence            45688899999999999999999999999999999875432 2334568999999999998 999999999999999999


Q ss_pred             EEeccCcccHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          83 LLELLTSAVDSKIRESFGSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        83 v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      ||||+++|+|.+++++.+.+++..++.++.|++.|++|||+.++
T Consensus       110 vmEy~~gG~L~~~i~~~~~l~e~~~~~~~~qi~~al~ylH~~~I  153 (311)
T 4aw0_A          110 GLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGI  153 (311)
T ss_dssp             EECCCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred             EEecCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCC
Confidence            99999999999999988899999999999999999999998764

>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A

Probab=99.97  E-value=6.8e-30  Score=163.09  Aligned_cols=122  Identities=20%  Similarity=0.242  Sum_probs=102.6

Q ss_pred             ccccccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCc-hhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeEE
Q psy8006           3 NIKNIISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRST-DLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMI   81 (126)
Q Consensus         3 ~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~-~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~~   81 (126)
                      .+.+|...+.||+|+||.||+|.+..+++.||+|++++..... .....+.+|+.+++.++| |||+++++++.+++.+|
T Consensus        11 ~ig~Y~i~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~H-pnIv~~~~~~~~~~~~~   89 (275)
T 3hyh_A           11 HIGNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRH-PHIIKLYDVIKSKDEII   89 (275)
T ss_dssp             ---CCEEEEEEEC---CCEEEEECTTTCCEEEEEEEECC------CHHHHHHHHHHHHHCCC-TTBCCEEEEEECSSEEE
T ss_pred             EeeCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEeHHHcCCHHHHHHHHHHHHHHHHCCC-CCCCeEEEEEEECCEEE
Confidence            3567888999999999999999999999999999998765433 334568999999999998 99999999999999999


Q ss_pred             EEEeccCcccHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          82 LLLELLTSAVDSKIRESFGSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        82 lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      +||||++ |+|.+++..++.+++.+++.++.|++.|++|||+.++
T Consensus        90 ivmEy~~-g~L~~~l~~~~~l~e~~~~~~~~qi~~al~ylH~~~I  133 (275)
T 3hyh_A           90 MVIEYAG-NELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRHKI  133 (275)
T ss_dssp             EEEECCC-EEHHHHHHHSCSCCHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred             EEEeCCC-CCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCc
Confidence            9999995 5698888888899999999999999999999999875

>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}

Probab=99.97  E-value=2e-29  Score=162.03  Aligned_cols=117  Identities=17%  Similarity=0.168  Sum_probs=105.5

Q ss_pred             cceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEe----CCeEEEE
Q psy8006           8 ISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFES----SHDMILL   83 (126)
Q Consensus         8 ~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~----~~~~~lv   83 (126)
                      ...+.||+|+||.||+|.+..++..||+|.+............+.+|+.++++++| ||||++++++..    .+.+|+|
T Consensus        29 ~~~~~iG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~H-pnIV~~~~~~~~~~~~~~~~~lv  107 (290)
T 3fpq_A           29 KFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQH-PNIVRFYDSWESTVKGKKCIVLV  107 (290)
T ss_dssp             EEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHTCCC-TTBCCEEEEEEEEETTEEEEEEE
T ss_pred             EeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCC-CCCCcEEEEEeeccCCCcEEEEE
Confidence            34667999999999999999999999999998876655556679999999999998 999999999864    3468999


Q ss_pred             EeccCcccHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhhccC
Q psy8006          84 LELLTSAVDSKIRESFGSKSESGVQNCLEPSISVFSSLSKFE  125 (126)
Q Consensus        84 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~l~~~~  125 (126)
                      |||+++|+|.+++++...+++..++.++.|++.||+|||..+
T Consensus       108 mEy~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~ylH~~~  149 (290)
T 3fpq_A          108 TELMTSGTLKTYLKRFKVMKIKVLRSWCRQILKGLQFLHTRT  149 (290)
T ss_dssp             EECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTSS
T ss_pred             EeCCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            999999999999998889999999999999999999999876

>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*

Probab=99.96  E-value=1.9e-29  Score=164.78  Aligned_cols=115  Identities=18%  Similarity=0.216  Sum_probs=104.4

Q ss_pred             cccccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeEEEE
Q psy8006           4 IKNIISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILL   83 (126)
Q Consensus         4 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~~lv   83 (126)
                      ++.|...+.||+|+||.||+|.+..+|..||+|.++....       ..+|+.++..++| ||||++++++.+++.+|||
T Consensus        57 ~~~~~~~~~lG~G~fG~Vy~a~~~~~g~~vAiK~i~~~~~-------~~~E~~il~~l~H-pnIV~l~~~~~~~~~~~iv  128 (336)
T 4g3f_A           57 VHWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVF-------RVEELVACAGLSS-PRIVPLYGAVREGPWVNIF  128 (336)
T ss_dssp             TTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTC-------CTHHHHTTTTCCC-TTBCCEEEEEEETTEEEEE
T ss_pred             hhheEeCcEeccCCCeEEEEEEECCCCCEEEEEEECHHHh-------HHHHHHHHHhCCC-CCCCcEEEEEEECCEEEEE
Confidence            3456667789999999999999999999999999986543       2469999999998 9999999999999999999


Q ss_pred             EeccCcccHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          84 LELLTSAVDSKIRESFGSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        84 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      |||+++|+|.+++++.+.+++..++.++.|++.||+|||+.++
T Consensus       129 mEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~aL~ylH~~~I  171 (336)
T 4g3f_A          129 MELLEGGSLGQLIKQMGCLPEDRALYYLGQALEGLEYLHTRRI  171 (336)
T ss_dssp             ECCCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTTTE
T ss_pred             EeccCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCc
Confidence            9999999999999988899999999999999999999998764

>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*

Probab=99.96  E-value=5.9e-29  Score=162.93  Aligned_cols=117  Identities=14%  Similarity=0.196  Sum_probs=105.0

Q ss_pred             cccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeEEEEEe
Q psy8006           6 NIISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLLE   85 (126)
Q Consensus         6 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~~lv~e   85 (126)
                      .|...+.||+|+||.||+|.+..+|+.||+|.++......  ...+.+|+.+++.++| ||||++++++.+++.+|||||
T Consensus        75 ~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~--~~~~~~Ei~il~~l~H-pnIV~l~~~~~~~~~~~ivmE  151 (346)
T 4fih_A           75 YLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQR--RELLFNEVVIMRDYQH-ENVVEMYNSYLVGDELWVVME  151 (346)
T ss_dssp             TEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCSS--GGGGHHHHHHHHHCCC-TTBCCEEEEEEETTEEEEEEC
T ss_pred             hcEEeEEeecCcCeEEEEEEECCCCCEEEEEEEecCchhH--HHHHHHHHHHHHhCCC-CCCCcEEEEEEECCEEEEEEe
Confidence            4666788999999999999999999999999998654322  2358899999999998 999999999999999999999


Q ss_pred             ccCcccHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          86 LLTSAVDSKIRESFGSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        86 ~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      |+++|+|.+++.. ..+++..++.++.|++.||+|||+.++
T Consensus       152 y~~gg~L~~~l~~-~~l~e~~~~~~~~qi~~aL~ylH~~~I  191 (346)
T 4fih_A          152 FLEGGALTDIVTH-TRMNEEQIAAVCLAVLQALSVLHAQGV  191 (346)
T ss_dssp             CCTTEEHHHHHHH-SCCCHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred             CCCCCcHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCc
Confidence            9999999998876 569999999999999999999998764

>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*

Probab=99.96  E-value=5.5e-30  Score=165.45  Aligned_cols=121  Identities=17%  Similarity=0.150  Sum_probs=102.9

Q ss_pred             ccccceeeccCccceeEEEEEEc---cCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeEE
Q psy8006           5 KNIISSIINDMGKYATVRRCRDR---KNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMI   81 (126)
Q Consensus         5 ~~~~~~~~lg~g~~~~v~~~~~~---~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~~   81 (126)
                      ++|...+.||+|+||.||+|.+.   .+++.||+|.++...........+.+|+.++.+++| ||||++++++.+++.+|
T Consensus        24 ~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~H-pnIv~l~~~~~~~~~~~  102 (304)
T 3ubd_A           24 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNH-PFIVKLHYAFQTEGKLY  102 (304)
T ss_dssp             GGEEEEEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEEEEECC------CCCCCCCC-TTEECEEEEEEETTEEE
T ss_pred             cccEEEEEEecCCCeEEEEEEEccCCCCCEEEEEEEEehHHcChHHHHHHHHHHHHHHHCCC-CCCCeEEEEEEECCEEE
Confidence            56888899999999999999874   467899999998765433333468889999999998 99999999999999999


Q ss_pred             EEEeccCcccHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          82 LLLELLTSAVDSKIRESFGSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        82 lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      +||||+++|+|.+++++.+.+++.+++.++.|++.||+|||+.++
T Consensus       103 ivmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~aL~ylH~~~I  147 (304)
T 3ubd_A          103 LILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLHSLGI  147 (304)
T ss_dssp             EEECCCTTCEEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred             EEEEcCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCC
Confidence            999999999999999988899999999999999999999999875

>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}

Probab=99.96  E-value=1.5e-28  Score=164.58  Aligned_cols=118  Identities=14%  Similarity=0.195  Sum_probs=105.7

Q ss_pred             ccccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeEEEEE
Q psy8006           5 KNIISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLL   84 (126)
Q Consensus         5 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~~lv~   84 (126)
                      ..|...+.||+|+||.||+|.+..+|+.||+|.+.......  ...+.+|+.+|+.++| ||||++++++..++.+||||
T Consensus       151 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~--~~~~~~Ei~il~~l~H-pnIV~l~~~~~~~~~~~iVm  227 (423)
T 4fie_A          151 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQR--RELLFNEVVIMRDYQH-ENVVEMYNSYLVGDELWVVM  227 (423)
T ss_dssp             GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESTTCSS--GGGHHHHHHHHHHCCC-TTBCCEEEEEEETTEEEEEE
T ss_pred             HhcEeeeEeccCcCcEEEEEEECCCCCEEEEEEEeccchhH--HHHHHHHHHHHHhCCC-CCCCceEEEEEECCEEEEEE
Confidence            34667789999999999999999999999999998654322  3358899999999998 99999999999999999999


Q ss_pred             eccCcccHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          85 ELLTSAVDSKIRESFGSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        85 e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      |||++|+|.++++. ..+++.+++.++.|++.||+|||+.++
T Consensus       228 Ey~~gG~L~~~i~~-~~l~e~~~~~~~~qil~aL~ylH~~~I  268 (423)
T 4fie_A          228 EFLEGGALTDIVTH-TRMNEEQIAAVCLAVLQALSVLHAQGV  268 (423)
T ss_dssp             ECCTTEEHHHHHHH-SCCCHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred             eCCCCCcHHHHHhc-cCCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence            99999999999875 569999999999999999999999764

>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*

Probab=99.96  E-value=3.1e-28  Score=157.23  Aligned_cols=119  Identities=14%  Similarity=0.147  Sum_probs=100.7

Q ss_pred             ccccceeeccCccceeEEEEEEc-----cCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCe
Q psy8006           5 KNIISSIINDMGKYATVRRCRDR-----KNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHD   79 (126)
Q Consensus         5 ~~~~~~~~lg~g~~~~v~~~~~~-----~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~   79 (126)
                      ++|...+.||+|+||.||+|.+.     .++..||+|.++...  ....+.+.+|+.++.+++| ||||++++++.+++.
T Consensus        13 ~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~--~~~~~~f~~E~~il~~l~H-pnIV~l~g~~~~~~~   89 (299)
T 4asz_A           13 HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDAS--DNARKDFHREAELLTNLQH-EHIVKFYGVCVEGDP   89 (299)
T ss_dssp             GGEEEEEEEEC--CCCEEEEEECSCC----CEEEEEEEECSCC--HHHHHHHHHHHHHHTTCCC-TTBCCEEEEECSSSS
T ss_pred             HHeEEeeEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCCCC--hHHHHHHHHHHHHHHhCCC-CCCccEEEEEeeCCE
Confidence            46777899999999999999864     457789999997542  3345579999999999998 999999999999999


Q ss_pred             EEEEEeccCcccHHHHHHhc-------------CCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          80 MILLLELLTSAVDSKIRESF-------------GSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        80 ~~lv~e~~~~~~L~~~~~~~-------------~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      .|+||||+++|+|.+++...             ..+++.++..++.|++.|++|||+.++
T Consensus        90 ~~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~i  149 (299)
T 4asz_A           90 LIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLASQHF  149 (299)
T ss_dssp             EEEEEECCTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred             EEEEEEcCCCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCc
Confidence            99999999999999998653             369999999999999999999998764

>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}

Probab=99.96  E-value=7.2e-28  Score=160.73  Aligned_cols=119  Identities=17%  Similarity=0.197  Sum_probs=105.4

Q ss_pred             cccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeC------Ce
Q psy8006           6 NIISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESS------HD   79 (126)
Q Consensus         6 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~------~~   79 (126)
                      .|...+.||+|+||.||+|.+..+|+.||+|+++...........+.+|+.+|+.++| ||||++++++...      +.
T Consensus        55 ~Y~~~~~lG~G~fG~V~~a~~~~t~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~H-pnIv~l~~~~~~~~~~~~~~~  133 (398)
T 4b99_A           55 EYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKH-DNIIAIKDILRPTVPYGEFKS  133 (398)
T ss_dssp             SEEEEEEEEECSSCEEEEEEETTTCCEEEEEEETTTTSSHHHHHHHHHHHHHHHHCCC-TTBCCEEEECCCSSCTTTCCC
T ss_pred             CeEEEEEEecccCeEEEEEEECCCCCEEEEEEECccccchHHHHHHHHHHHHHHhcCC-CCcceEeeeeecccccccCCE
Confidence            4778899999999999999999999999999998765544445568899999999998 9999999987543      57


Q ss_pred             EEEEEeccCcccHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          80 MILLLELLTSAVDSKIRESFGSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        80 ~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      +|+||||++++ |.+++..++.+++..++.++.|++.||+|||+.++
T Consensus       134 ~~ivmE~~~g~-L~~~i~~~~~l~~~~~~~~~~qil~al~ylH~~~i  179 (398)
T 4b99_A          134 VYVVLDLMESD-LHQIIHSSQPLTLEHVRYFLYQLLRGLKYMHSAQV  179 (398)
T ss_dssp             EEEEEECCSEE-HHHHHTSSSCCCHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred             EEEEEeCCCCC-HHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCcC
Confidence            89999999755 99999888899999999999999999999999875

>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}

Probab=99.95  E-value=2e-27  Score=155.26  Aligned_cols=119  Identities=13%  Similarity=0.178  Sum_probs=101.9

Q ss_pred             ccccceeeccCccceeEEEEEEc-----cCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCe
Q psy8006           5 KNIISSIINDMGKYATVRRCRDR-----KNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHD   79 (126)
Q Consensus         5 ~~~~~~~~lg~g~~~~v~~~~~~-----~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~   79 (126)
                      +++...+.||+|+||.||+|...     .++..||||.++..  .....+.+.+|+.++.+++| ||||++++++..++.
T Consensus        41 ~d~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~--~~~~~~~f~~E~~il~~l~H-pnIV~l~g~~~~~~~  117 (329)
T 4aoj_A           41 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEA--SESARQDFQREAELLTMLQH-QHIVRFFGVCTEGRP  117 (329)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEESSSCC---CEEEEEEEESCC--SHHHHHHHHHHHHHHTTCCC-TTBCCEEEEECSSSS
T ss_pred             HHeEEEEEEccCCCcEEEEEEECCcccCCCCeEEEEEEECcC--CHHHHHHHHHHHHHHHhCCC-CCCCcEEEEEEECCE
Confidence            35666788999999999999864     46789999999754  23345579999999999998 999999999999999


Q ss_pred             EEEEEeccCcccHHHHHHhc---------------CCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          80 MILLLELLTSAVDSKIRESF---------------GSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        80 ~~lv~e~~~~~~L~~~~~~~---------------~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      +||||||+++|+|.+++...               .++++.++..++.|++.|++|||+.++
T Consensus       118 ~~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~i  179 (329)
T 4aoj_A          118 LLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGLHF  179 (329)
T ss_dssp             EEEEEECCTTCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred             EEEEEEcCCCCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHHHHHHHHHHHHhcCCe
Confidence            99999999999999998642               358999999999999999999998764

>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*

Probab=99.95  E-value=8.4e-28  Score=155.27  Aligned_cols=120  Identities=13%  Similarity=0.114  Sum_probs=100.3

Q ss_pred             ccccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCC------
Q psy8006           5 KNIISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSH------   78 (126)
Q Consensus         5 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~------   78 (126)
                      .+|...+.||+|+||.||+|.+..+++.||+|.++.... +...+.+.+|+.++.+++| ||||++++++...+      
T Consensus         5 ~dy~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~-~~~~~~~~~E~~il~~l~H-pnIV~~~~~~~~~~~~~~~~   82 (299)
T 4g31_A            5 TDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNR-ELAREKVMREVKALAKLEH-PGIVRYFNAWLEKNTTEKLQ   82 (299)
T ss_dssp             HHEEEEEEEEECC--EEEEEEETTTCCEEEEEEEEECSS-HHHHHHHHHHHHHHTTCCC-TTBCCEEEEEEEEC------
T ss_pred             hhCEEeeEEecCCCeEEEEEEECCCCCEEEEEEEeccCC-HHHHHHHHHHHHHHHhCCC-CCCCeEEEEEEecCcccccc
Confidence            467788999999999999999999999999999986542 2334568999999999998 99999999986443      


Q ss_pred             ------eEEEEEeccCcccHHHHHHhcCCC---CHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          79 ------DMILLLELLTSAVDSKIRESFGSK---SESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        79 ------~~~lv~e~~~~~~L~~~~~~~~~~---~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                            ++|+||||+++|+|.+++..+..+   +...++.++.|+++|++|||+.++
T Consensus        83 ~~~~~~~l~ivmE~~~gg~L~~~l~~~~~~~~~~~~~~~~i~~qi~~al~ylH~~~I  139 (299)
T 4g31_A           83 PSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIAEAVEFLHSKGL  139 (299)
T ss_dssp             ----CEEEEEEEECCCSCCHHHHHHTCCSGGGSCHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred             ccCCCcEEEEEEecCCCCcHHHHHHhcCCCChhHHHHHHHHHHHHHHHHHHHHHCcC
Confidence                  479999999999999999876543   456688999999999999999875

>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A

Probab=99.95  E-value=7.2e-27  Score=151.42  Aligned_cols=119  Identities=12%  Similarity=0.068  Sum_probs=99.6

Q ss_pred             cccceeeccCccceeEEEEEEc-----cCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeE
Q psy8006           6 NIISSIINDMGKYATVRRCRDR-----KNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDM   80 (126)
Q Consensus         6 ~~~~~~~lg~g~~~~v~~~~~~-----~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~   80 (126)
                      ++.-.+.||+|+||.||+|...     .++..||||.++... .....+.+.+|+.++.+++| ||||++++++..++..
T Consensus        27 ~~~~~~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~-~~~~~~~f~~E~~il~~l~H-pNIV~l~g~~~~~~~~  104 (308)
T 4gt4_A           27 AVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKA-EGPLREEFRHEAMLRARLQH-PNVVCLLGVVTKDQPL  104 (308)
T ss_dssp             GEEEEEEEEECSSCEEEEEEEC-------CEEEEEEECCC-C-CC-CHHHHHHHHHHHHHCCC-TTBCCEEEEECSSSSC
T ss_pred             HCeEeeEeccCCCcEEEEEEEcCCccCCCCeEEEEEEECccc-ChHHHHHHHHHHHHHHhCCC-CCCCCcceEEEECCEE
Confidence            4445678999999999999853     456789999997543 23345679999999999998 9999999999999999


Q ss_pred             EEEEeccCcccHHHHHHhc----------------CCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          81 ILLLELLTSAVDSKIRESF----------------GSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        81 ~lv~e~~~~~~L~~~~~~~----------------~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      ++||||+++|+|.+++..+                ..+++.++..++.|++.|++|||+.++
T Consensus       105 ~lV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~i  166 (308)
T 4gt4_A          105 SMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSHHV  166 (308)
T ss_dssp             EEEEECCSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred             EEEEEcCCCCcHHHHHHhhCccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhCCC
Confidence            9999999999999998542                358999999999999999999998764

>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A

Probab=99.95  E-value=2.8e-27  Score=165.24  Aligned_cols=123  Identities=20%  Similarity=0.278  Sum_probs=105.4

Q ss_pred             ccccccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCch-hHHHHHHH---HHHHHHhcCCCCceeeeeeeEeCC
Q psy8006           3 NIKNIISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTD-LKAEILHE---VAVLEACRCNSRIVQLHQVFESSH   78 (126)
Q Consensus         3 ~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~-~~~~~~~e---~~~l~~~~~~~~iv~l~~~~~~~~   78 (126)
                      ++++|...++||+|+||.||+|.+..+|..||+|++.+...... ......+|   +.++..++| ||||++++++.+++
T Consensus       187 slddf~i~k~LG~G~fG~V~la~~~~tg~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~~~H-P~IV~l~~~f~~~~  265 (689)
T 3v5w_A          187 TMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDC-PFIVCMSYAFHTPD  265 (689)
T ss_dssp             CGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSSSCC-TTBCCEEEEEECSS
T ss_pred             chHHeEEEEEEecccCeEEEEEEECCCCCEEEEEEEeHHHcchhhhHHHHHHHHHHHHHHhhCCC-CCEeEEEEEEEECC
Confidence            47889999999999999999999999999999999987543211 11223334   455566677 99999999999999


Q ss_pred             eEEEEEeccCcccHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          79 DMILLLELLTSAVDSKIRESFGSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        79 ~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      .+|+||||++||+|.+++.+.+.+++..++.++.||+.||+|||+.+|
T Consensus       266 ~lylVmEy~~GGdL~~~l~~~~~l~E~~a~~y~~qIl~aL~yLH~~gI  313 (689)
T 3v5w_A          266 KLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHNRFV  313 (689)
T ss_dssp             EEEEEECCCCSCBHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHTTTE
T ss_pred             EEEEEEecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCc
Confidence            999999999999999999988899999999999999999999999874

>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A

Probab=99.94  E-value=1.8e-26  Score=160.02  Aligned_cols=120  Identities=18%  Similarity=0.298  Sum_probs=106.9

Q ss_pred             cccccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeEEEE
Q psy8006           4 IKNIISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILL   83 (126)
Q Consensus         4 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~~lv   83 (126)
                      +++|...+.||+|+||.||+|.++.+|..+|+|.+....  ......+.+|+.+|+.++| |||+++++++.+++.+|+|
T Consensus       156 l~~Y~i~~~lG~G~fg~V~~~~~~~tg~~~AiK~i~~~~--~~~~~~~~~Ei~il~~l~h-pnIv~l~~~~~~~~~~~iv  232 (573)
T 3uto_A          156 LDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPH--ESDKETVRKEIQTMSVLRH-PTLVNLHDAFEDDNEMVMI  232 (573)
T ss_dssp             GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCS--HHHHHHHHHHHHHHHHTCC-TTBCCEEEEEECSSEEEEE
T ss_pred             ccccEEEEEEeeccCeEEEEEEECCCCCEEEEEEEeccc--hhhHHHHHHHHHHHHhCCC-CCCCeEEEEEEECCEEEEE
Confidence            356778899999999999999999999999999997653  2234468899999999998 9999999999999999999


Q ss_pred             EeccCcccHHHHHHh-cCCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          84 LELLTSAVDSKIRES-FGSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        84 ~e~~~~~~L~~~~~~-~~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      |||+++|+|.+++.. .+.+++.+++.++.|++.||.|||+.++
T Consensus       233 ~E~~~gg~L~~~i~~~~~~l~e~~~~~~~~qi~~al~ylH~~~i  276 (573)
T 3uto_A          233 YEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHENNY  276 (573)
T ss_dssp             EECCCCCBHHHHHTCTTSCEEHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred             EeecCCCcHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence            999999999988864 4679999999999999999999998764

>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}

Probab=99.94  E-value=1.6e-26  Score=149.58  Aligned_cols=117  Identities=14%  Similarity=0.086  Sum_probs=100.2

Q ss_pred             ccccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeEEEEE
Q psy8006           5 KNIISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLL   84 (126)
Q Consensus         5 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~~lv~   84 (126)
                      +++...+.||+|+||.||+|....   .+|||.++.........+.+.+|+.++.+++| ||||++++++. .+.++|||
T Consensus        36 ~~l~l~~~iG~G~fG~Vy~~~~~~---~vAvK~~~~~~~~~~~~~~f~~E~~il~~l~H-pNIV~l~g~~~-~~~~~iVm  110 (307)
T 3omv_A           36 SEVMLSTRIGSGSFGTVYKGKWHG---DVAVKILKVVDPTPEQFQAFRNEVAVLRKTRH-VNILLFMGYMT-KDNLAIVT  110 (307)
T ss_dssp             TSCCEEEECCCCSSSEEEEEESSS---EEEEEECCCSSCCHHHHHHHHHHHHHHTTCCC-TTBCCEEEEEC-SSSCEEEE
T ss_pred             HHeEEeeEEeeCCCcEEEEEEECC---cEEEEEEEecCCCHHHHHHHHHHHHHHHhCCC-CCEeeEEEEEE-CCeEEEEE
Confidence            355667889999999999997643   59999998665555556679999999999999 99999999875 45689999


Q ss_pred             eccCcccHHHHHHh-cCCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          85 ELLTSAVDSKIRES-FGSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        85 e~~~~~~L~~~~~~-~~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      ||+++|+|.+++.. +..+++.++..++.|++.||+|||+.++
T Consensus       111 Ey~~gGsL~~~l~~~~~~l~~~~~~~i~~qia~gL~yLH~~~I  153 (307)
T 3omv_A          111 QWCEGSSLYKHLHVQETKFQMFQLIDIARQTAQGMDYLHAKNI  153 (307)
T ss_dssp             ECCSSCBHHHHHHTSCCCCCHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred             EcCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCc
Confidence            99999999998865 4579999999999999999999998764

>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A

Probab=99.94  E-value=1.8e-25  Score=146.04  Aligned_cols=123  Identities=18%  Similarity=0.232  Sum_probs=112.7

Q ss_pred             ccccccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeEEE
Q psy8006           3 NIKNIISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMIL   82 (126)
Q Consensus         3 ~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~~l   82 (126)
                      .+.+|...+.||+|+||.||+|.+..++..+|+|.+............+.+|+.+++.++| |||+++++.+...+..|+
T Consensus        13 ~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h-pnIv~l~~~~~~~~~~~l   91 (328)
T 3fe3_A           13 HIGNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNH-PNIVKLFEVIETEKTLYL   91 (328)
T ss_dssp             EETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCC-TTBCCEEEEEECSSEEEE
T ss_pred             ccCCEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhhcCCHHHHHHHHHHHHHHHhCCC-CCEeeEEEEEEECCEEEE
Confidence            4567889999999999999999999999999999998876655556678999999999998 999999999999999999


Q ss_pred             EEeccCcccHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          83 LLELLTSAVDSKIRESFGSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        83 v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      ||||+++++|.+++...+.+++..+..++.|++.|++|||+.++
T Consensus        92 v~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~al~~lH~~~i  135 (328)
T 3fe3_A           92 IMEYASGGEVFDYLVAHGRMKEKEARSKFRQIVSAVQYCHQKRI  135 (328)
T ss_dssp             EECCCTTCBHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred             EEECCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCE
Confidence            99999999999999887889999999999999999999998764

>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*

Probab=99.94  E-value=2.5e-25  Score=146.50  Aligned_cols=121  Identities=11%  Similarity=0.027  Sum_probs=101.3

Q ss_pred             ccccceeeccCccceeEEEEEEccCC-----cEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeC-C
Q psy8006           5 KNIISSIINDMGKYATVRRCRDRKNG-----TQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESS-H   78 (126)
Q Consensus         5 ~~~~~~~~lg~g~~~~v~~~~~~~~~-----~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~-~   78 (126)
                      ++|...+.||+|+||.||+|.+..++     +.||+|.+..... ......+.+|+.++.+++||||||++++++..+ +
T Consensus        64 ~~~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~~~-~~~~~~~~~E~~il~~l~hhpnIV~l~g~~~~~~~  142 (353)
T 4ase_A           64 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGAT-HSEHRALMSELKILIHIGHHLNVVNLLGACTKPGG  142 (353)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTTCC-HHHHHHHHHHHHHHHHHCCCTTBCCEEEEECCTTS
T ss_pred             HHeEEeeEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEccccC-hHHHHHHHHHHHHHHHcCCCCcEEEEEEEEEecCC
Confidence            45667889999999999999876543     5799999976543 233456999999999999889999999998654 5


Q ss_pred             eEEEEEeccCcccHHHHHHhc----------------CCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          79 DMILLLELLTSAVDSKIRESF----------------GSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        79 ~~~lv~e~~~~~~L~~~~~~~----------------~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      .++||||||++|+|.++++..                ..+++.++..++.|++.|++|||+.++
T Consensus       143 ~~~iV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~yLH~~~i  206 (353)
T 4ase_A          143 PLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKC  206 (353)
T ss_dssp             CCEEEEECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred             EEEEEEEcCCCCCHHHHHHhcccccccccccchhhccccCCHHHHHHHHHHHHHHHHhHhhCCe
Confidence            789999999999999998642                348999999999999999999998764

>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*

Probab=99.93  E-value=8.2e-25  Score=144.51  Aligned_cols=114  Identities=13%  Similarity=0.132  Sum_probs=99.7

Q ss_pred             cccceeeccCccceeEEEEEEc---cCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeEEE
Q psy8006           6 NIISSIINDMGKYATVRRCRDR---KNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMIL   82 (126)
Q Consensus         6 ~~~~~~~lg~g~~~~v~~~~~~---~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~~l   82 (126)
                      .|...+.||+|+||.||+|.++   .++..||+|.+....    ....+.+|+.++..+.+||||+++++++...+++|+
T Consensus        22 ~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~----~~~~~~~E~~~l~~~~~h~nIv~l~~~~~~~~~~~l   97 (361)
T 4f9c_A           22 VFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTS----HPIRIAAELQCLTVAGGQDNVMGVKYCFRKNDHVVI   97 (361)
T ss_dssp             TCEEEEEEEECSSEEEEEEEEEBTTSCEEEEEEEEECTTS----CHHHHHHHHHHHHHTCSBTTBCCCSEEEEETTEEEE
T ss_pred             cEEEEEEEecccCcEEEEEEEcccCCCCCEEEEEEEcccc----CHHHHHHHHHHHHHhcCCCCCceEEEEEEECCEEEE
Confidence            4777899999999999999875   457789999987543    233678999999999655999999999999999999


Q ss_pred             EEeccCcccHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          83 LLELLTSAVDSKIRESFGSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        83 v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      ||||+++++|.++++   .+++.+++.++.|++.|++|||+.++
T Consensus        98 vmE~~~g~~L~~~~~---~l~~~~~~~~~~qll~al~ylH~~gI  138 (361)
T 4f9c_A           98 AMPYLEHESFLDILN---SLSFQEVREYMLNLFKALKRIHQFGI  138 (361)
T ss_dssp             EEECCCCCCHHHHHT---TCCHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred             EEeCCCcccHHHHHc---CCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence            999999999998885   48999999999999999999999874

>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B

Probab=99.93  E-value=2.2e-24  Score=142.56  Aligned_cols=120  Identities=19%  Similarity=0.241  Sum_probs=109.9

Q ss_pred             cccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeEEEEEe
Q psy8006           6 NIISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLLE   85 (126)
Q Consensus         6 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~~lv~e   85 (126)
                      +|...+.||+|+||.||+|.+..++..+|+|.+............+.+|+.++..++| |||+++++.+...+..|+|||
T Consensus        30 ~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~il~~l~h-pnIv~~~~~~~~~~~~~lv~e  108 (362)
T 2bdw_A           30 NYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQH-PNIVRLHDSIQEESFHYLVFD  108 (362)
T ss_dssp             HEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCHHHHHHHHHHHHHHHHCCC-TTBCCEEEEEECSSEEEEEEC
T ss_pred             CeEEeeEEecCCCeEEEEEEECCCCCEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCC-CCCCeEEEEEEeCCEEEEEEe
Confidence            5777889999999999999999999999999998776655555678999999999998 999999999999999999999


Q ss_pred             ccCcccHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          86 LLTSAVDSKIRESFGSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        86 ~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      |+++++|.+.+..+..+++..+..++.|++.|++|||+.++
T Consensus       109 ~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~al~~lH~~~i  149 (362)
T 2bdw_A          109 LVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHSNGI  149 (362)
T ss_dssp             CCCSCBHHHHHTTCSCCCHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred             cCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence            99999999988877789999999999999999999999764

>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A

Probab=99.92  E-value=5.9e-24  Score=140.41  Aligned_cols=121  Identities=14%  Similarity=0.151  Sum_probs=109.0

Q ss_pred             cccccccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeEE
Q psy8006           2 NNIKNIISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMI   81 (126)
Q Consensus         2 ~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~~   81 (126)
                      .....|...+.||+|+||.||++.+..++..+|+|.+.......   ..+.+|+.+++.++| |||+++++++..++..+
T Consensus        17 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~---~~~~~E~~~l~~l~h-pniv~~~~~~~~~~~~~   92 (361)
T 3uc3_A           17 HDSDRYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGAAID---ENVQREIINHRSLRH-PNIVRFKEVILTPTHLA   92 (361)
T ss_dssp             CCTTTEEEEEEESSSTTSSEEEEEETTTCCEEEEEEEESSTTSC---HHHHHHHHHHHHCCC-TTBCCEEEEEECSSEEE
T ss_pred             CCCCcEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEecCcccc---HHHHHHHHHHHhCCC-CCCCcEEEEEeeCCEEE
Confidence            34567888999999999999999999999999999998654322   357899999999998 99999999999999999


Q ss_pred             EEEeccCcccHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          82 LLLELLTSAVDSKIRESFGSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        82 lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      +||||+++++|.+++...+.+++..++.++.|++.|++|||+.++
T Consensus        93 lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~ql~~~L~~LH~~~i  137 (361)
T 3uc3_A           93 IIMEYASGGELYERICNAGRFSEDEARFFFQQLLSGVSYCHSMQI  137 (361)
T ss_dssp             EEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred             EEEEeCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCc
Confidence            999999999999999877889999999999999999999998764

>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*

Probab=99.92  E-value=2.8e-24  Score=142.00  Aligned_cols=120  Identities=26%  Similarity=0.400  Sum_probs=108.1

Q ss_pred             cccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCc----hhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeEE
Q psy8006           6 NIISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRST----DLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMI   81 (126)
Q Consensus         6 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~----~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~~   81 (126)
                      .|...+.||+|+||.||+|.+..++..+|+|.+.......    .....+.+|+.++..++| |||+++++.+......+
T Consensus        13 ~y~~~~~LG~G~fg~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~h-pnIv~l~~~~~~~~~~~   91 (361)
T 2yab_A           13 FYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLH-PNIITLHDVYENRTDVV   91 (361)
T ss_dssp             TEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHTTCCC-TTBCCEEEEEECSSEEE
T ss_pred             ceEEeeEEeeCcCEEEEEEEECCCCCEEEEEEEEccccccccchhHHHHHHHHHHHHHhCCC-cCCCcEEEEEEeCCEEE
Confidence            4777899999999999999999999999999998765422    134568999999999998 99999999999999999


Q ss_pred             EEEeccCcccHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          82 LLLELLTSAVDSKIRESFGSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        82 lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      +||||+++++|.+++..+..+++..+..++.|++.|+.|||+.++
T Consensus        92 lv~e~~~gg~L~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~gi  136 (361)
T 2yab_A           92 LILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHTKKI  136 (361)
T ss_dssp             EEEECCCSCBHHHHHTTCSCCBHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred             EEEEcCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCc
Confidence            999999999999999887889999999999999999999998763

>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*

Probab=99.92  E-value=5.7e-24  Score=141.47  Aligned_cols=124  Identities=10%  Similarity=0.121  Sum_probs=112.0

Q ss_pred             cccccccceeeccCc--cceeEEEEEEccCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCe
Q psy8006           2 NNIKNIISSIINDMG--KYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHD   79 (126)
Q Consensus         2 ~~~~~~~~~~~lg~g--~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~   79 (126)
                      .+..+|...+.||+|  +||.||+|.+..++..||+|.+............+.+|+.+++.++| |||+++++++..++.
T Consensus        22 ~~~~~y~~~~~lG~G~~~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h-~niv~~~~~~~~~~~  100 (389)
T 3gni_B           22 PEGGCYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNH-PNIVPYRATFIADNE  100 (389)
T ss_dssp             CCGGGEEEEEEEEEETTTTEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCC-TTBCCEEEEEEETTE
T ss_pred             CCCCcEEEEecccCCcCCceEEEEEEEcCCCCEEEEEEecccccChHHHHHHHHHHHHHHhCCC-CCCCcEeEEEEECCE
Confidence            356778899999999  99999999999999999999998876555555568899999999998 999999999999999


Q ss_pred             EEEEEeccCcccHHHHHHhc--CCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          80 MILLLELLTSAVDSKIRESF--GSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        80 ~~lv~e~~~~~~L~~~~~~~--~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      .++||||+++++|.+++...  ..+++..+..++.|++.|++|||+.++
T Consensus       101 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~i  149 (389)
T 3gni_B          101 LWVVTSFMAYGSAKDLICTHFMDGMNELAIAYILQGVLKALDYIHHMGY  149 (389)
T ss_dssp             EEEEEECCTTCBHHHHHHHTCTTCCCHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred             EEEEEEccCCCCHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHhCCe
Confidence            99999999999999998764  579999999999999999999998763

>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*

Probab=99.92  E-value=6.9e-24  Score=139.39  Aligned_cols=124  Identities=16%  Similarity=0.143  Sum_probs=109.7

Q ss_pred             ccccccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCc-hhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeEE
Q psy8006           3 NIKNIISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRST-DLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMI   81 (126)
Q Consensus         3 ~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~-~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~~   81 (126)
                      ++.+|...+.||+|+||.||++.+..++..+|+|.+....... .....+.+|..++..+.+||||+++++++...+..|
T Consensus         7 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~   86 (345)
T 3a8x_A            7 GLQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLF   86 (345)
T ss_dssp             CGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGSCSHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEE
T ss_pred             chhheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEhHHhcchHHHHHHHHHHHHHHhcCCCCccCeEEEEEEeCCEEE
Confidence            3567888999999999999999999999999999998765433 334458899999998843499999999999999999


Q ss_pred             EEEeccCcccHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          82 LLLELLTSAVDSKIRESFGSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        82 lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      +||||+++++|.+++.....+++..++.++.|++.|++|||+.++
T Consensus        87 lv~e~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~LH~~~i  131 (345)
T 3a8x_A           87 FVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERGI  131 (345)
T ss_dssp             EEECCCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred             EEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCc
Confidence            999999999999999877889999999999999999999998764

>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}

Probab=99.92  E-value=2.7e-24  Score=145.40  Aligned_cols=121  Identities=18%  Similarity=0.244  Sum_probs=108.7

Q ss_pred             ccccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeEEEEE
Q psy8006           5 KNIISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLL   84 (126)
Q Consensus         5 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~~lv~   84 (126)
                      +.|...+.||+|+||.||+|.+..++..+|+|.+............+.+|+.+++.++| |||+++++.+..++..|+||
T Consensus        11 ~~Y~i~~~LG~G~fg~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~E~~il~~l~h-pnIv~l~~~~~~~~~~~lv~   89 (444)
T 3soa_A           11 EEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKH-PNIVRLHDSISEEGHHYLIF   89 (444)
T ss_dssp             HHEEEEEEEEEC--CEEEEEEETTTTEEEEEEEEESCSCHHHHHHHHHHHHHHHHHCCB-TTBCCEEEEEECSSEEEEEE
T ss_pred             CCeEEEEEeccCCCeEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCC-cCCCeEEEEEEECCEEEEEE
Confidence            45777899999999999999999999999999998876655555678999999999998 99999999999999999999


Q ss_pred             eccCcccHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          85 ELLTSAVDSKIRESFGSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        85 e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      ||+++++|.+.+..+..+++..+..++.|++.|++|||+.++
T Consensus        90 E~~~gg~L~~~i~~~~~~~e~~~~~i~~qil~aL~~lH~~gi  131 (444)
T 3soa_A           90 DLVTGGELFEDIVAREYYSEADASHCIQQILEAVLHCHQMGV  131 (444)
T ss_dssp             CCCBCCBHHHHHHHCSCCCHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred             EeCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCc
Confidence            999999999998888889999999999999999999999874

>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...

Probab=99.92  E-value=2.3e-24  Score=141.25  Aligned_cols=123  Identities=18%  Similarity=0.183  Sum_probs=109.8

Q ss_pred             ccccccceeeccCccceeEEEEEEccCCcEEEEEEeecCCC-CchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeEE
Q psy8006           3 NIKNIISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRR-STDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMI   81 (126)
Q Consensus         3 ~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~-~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~~   81 (126)
                      ++++|...+.||+|+||.||++.+..++..+|+|.+..... .......+.+|..++..++| |||+++++.+...+..|
T Consensus         3 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~h-p~iv~l~~~~~~~~~~~   81 (337)
T 1o6l_A            3 TMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRH-PFLTALKYAFQTHDRLC   81 (337)
T ss_dssp             CGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCC-TTBCCEEEEEECSSEEE
T ss_pred             ChHHeEEEEEEecCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhCCC-CcCcceEEEEEeCCEEE
Confidence            46788899999999999999999999999999999986532 12234468899999999998 99999999999999999


Q ss_pred             EEEeccCcccHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          82 LLLELLTSAVDSKIRESFGSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        82 lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      +||||+++++|..++.....+++..++.++.|++.|++|||+.++
T Consensus        82 lv~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~i  126 (337)
T 1o6l_A           82 FVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDV  126 (337)
T ss_dssp             EEEECCTTCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred             EEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence            999999999999999887889999999999999999999999864

>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A

Probab=99.92  E-value=6.2e-24  Score=136.43  Aligned_cols=122  Identities=18%  Similarity=0.233  Sum_probs=107.5

Q ss_pred             cccccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeEEEE
Q psy8006           4 IKNIISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILL   83 (126)
Q Consensus         4 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~~lv   83 (126)
                      +++|...+.||+|+||.||+|.+..++..+|+|.+............+.+|+.++..++| |||+++++.+..++..++|
T Consensus         1 l~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h-~~iv~~~~~~~~~~~~~lv   79 (292)
T 3o0g_A            1 MQKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKH-KNIVRLHDVLHSDKKLTLV   79 (292)
T ss_dssp             CCSEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCC-TTBCCEEEEEEETTEEEEE
T ss_pred             CCCceeeeEecCCCCeEEEEEEECCCCceEEEEeeeccCCcCCcchHHHHHHHHHhcCCC-CCEeeEEeEEEeCCEEEEE
Confidence            357888899999999999999999999999999998776555555678899999999998 9999999999999999999


Q ss_pred             EeccCcccHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          84 LELLTSAVDSKIRESFGSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        84 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      |||++++.+..+...+..+++..+..++.|++.|++|||+.++
T Consensus        80 ~e~~~~~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~~i  122 (292)
T 3o0g_A           80 FEFCDQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSRNV  122 (292)
T ss_dssp             EECCSEEHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred             EecCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCe
Confidence            9999987555555556789999999999999999999998763

>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}

Probab=99.92  E-value=2.5e-24  Score=141.90  Aligned_cols=123  Identities=19%  Similarity=0.176  Sum_probs=107.7

Q ss_pred             cccccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCC-chhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeEEE
Q psy8006           4 IKNIISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRS-TDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMIL   82 (126)
Q Consensus         4 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~-~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~~l   82 (126)
                      +++|...+.||+|+||.||++.+..++..+|+|++...... ........+|..++..+.+||||+++++++...+..|+
T Consensus        22 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~l  101 (353)
T 3txo_A           22 IDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLFCCFQTPDRLFF  101 (353)
T ss_dssp             -CCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHHTTHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEE
T ss_pred             hhheEEEEEEeeCCCEEEEEEEEcCCCCEEEEEEEEHHHhcchhHHHHHHHHHHHHHhccCCCceeeEEEEEEeCCEEEE
Confidence            56788899999999999999999999999999999865321 22344578899999988544999999999999999999


Q ss_pred             EEeccCcccHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          83 LLELLTSAVDSKIRESFGSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        83 v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      ||||+++++|..++.....+++..++.++.|++.|++|||+.++
T Consensus       102 v~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~gi  145 (353)
T 3txo_A          102 VMEFVNGGDLMFHIQKSRRFDEARARFYAAEIISALMFLHDKGI  145 (353)
T ss_dssp             EEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred             EEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCC
Confidence            99999999999999887889999999999999999999999864

>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}

Probab=99.92  E-value=6.6e-24  Score=141.70  Aligned_cols=123  Identities=16%  Similarity=0.148  Sum_probs=107.3

Q ss_pred             cccccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCch-hHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeEEE
Q psy8006           4 IKNIISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTD-LKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMIL   82 (126)
Q Consensus         4 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~-~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~~l   82 (126)
                      +.+|...+.||+|+||.||++.+..++..+|+|++........ ....+.+|..++.++..||||+++++++...+..|+
T Consensus        51 ~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AvK~~~k~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~l  130 (396)
T 4dc2_A           51 LQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFF  130 (396)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGTC----CCHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEE
T ss_pred             hhHcEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhcCCCCCcCeeEEEEEECCEEEE
Confidence            5678889999999999999999999999999999987654322 223578899999888434999999999999999999


Q ss_pred             EEeccCcccHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          83 LLELLTSAVDSKIRESFGSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        83 v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      ||||+++++|..++.....+++..++.++.|++.|++|||+.++
T Consensus       131 V~E~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~LH~~gi  174 (396)
T 4dc2_A          131 VIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERGI  174 (396)
T ss_dssp             EEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred             EEEcCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCE
Confidence            99999999999999887889999999999999999999999874

>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}

Probab=99.92  E-value=1.2e-23  Score=137.20  Aligned_cols=121  Identities=26%  Similarity=0.445  Sum_probs=108.1

Q ss_pred             ccccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCc----hhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeE
Q psy8006           5 KNIISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRST----DLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDM   80 (126)
Q Consensus         5 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~----~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~   80 (126)
                      +.|...+.||+|+||.||+|.+..++..+|+|.+.......    .....+.+|+.++..++| |||+++++.+......
T Consensus        11 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h-p~iv~~~~~~~~~~~~   89 (326)
T 2y0a_A           11 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQH-PNVITLHEVYENKTDV   89 (326)
T ss_dssp             HHEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEBCCSTTCSSSBCHHHHHHHHHHHHHCCC-TTBCCEEEEEECSSEE
T ss_pred             cceEeceEEeeCCCeEEEEEEECCCCcEEEEEEEEccccccccchhhHHHHHHHHHHHHhCCC-CCCCcEEEEEEeCCEE
Confidence            34777899999999999999999999999999998764322    124568999999999998 9999999999999999


Q ss_pred             EEEEeccCcccHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          81 ILLLELLTSAVDSKIRESFGSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        81 ~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      ++||||+++++|.+++.....+++..+..++.|++.|+.|||+.++
T Consensus        90 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~al~~lH~~~i  135 (326)
T 2y0a_A           90 ILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQI  135 (326)
T ss_dssp             EEEEECCCSCBHHHHHTTSSCCBHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred             EEEEEcCCCCCHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHHCCe
Confidence            9999999999999999887889999999999999999999998763

>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}

Probab=99.92  E-value=1.7e-23  Score=134.72  Aligned_cols=121  Identities=17%  Similarity=0.070  Sum_probs=108.5

Q ss_pred             ccccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCc-hhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeEEEE
Q psy8006           5 KNIISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRST-DLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILL   83 (126)
Q Consensus         5 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~-~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~~lv   83 (126)
                      ..|...+.||+|+||.||++.+..++..+|+|.+....... .....+.+|+.++..++| |||+++++.+...+..|+|
T Consensus        11 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h-p~iv~~~~~~~~~~~~~lv   89 (294)
T 4eqm_A           11 ERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSH-QNIVSMIDVDEEDDCYYLV   89 (294)
T ss_dssp             TTEEEEEEEEEETTEEEEEEEETTTCSEEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCB-TTBCCEEEEEECSSEEEEE
T ss_pred             ccEEEEEEEccCCCEEEEEEEECCCCCeEEEEEeccCccccHHHHHHHHHHHHHHhcCCC-CCCceEEEeeeeCCeEEEE
Confidence            35777899999999999999999999999999997654433 334568999999999998 9999999999999999999


Q ss_pred             EeccCcccHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          84 LELLTSAVDSKIRESFGSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        84 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      |||+++++|.+++.....+++..+..++.|++.|++|||+.++
T Consensus        90 ~e~~~g~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i  132 (294)
T 4eqm_A           90 MEYIEGPTLSEYIESHGPLSVDTAINFTNQILDGIKHAHDMRI  132 (294)
T ss_dssp             EECCCSCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred             EeCCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCc
Confidence            9999999999999887889999999999999999999998764

>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*

Probab=99.92  E-value=6.2e-24  Score=137.50  Aligned_cols=111  Identities=13%  Similarity=0.095  Sum_probs=92.0

Q ss_pred             ccccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCchhHHHH--HHHHHHHHHhcCCCCceeeeeeeEeCC----
Q psy8006           5 KNIISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEI--LHEVAVLEACRCNSRIVQLHQVFESSH----   78 (126)
Q Consensus         5 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~--~~e~~~l~~~~~~~~iv~l~~~~~~~~----   78 (126)
                      ++|...+.||+|+||.||+|.+  +|..||||.++...     ...+  ..|+..+..++| |||+++++++..++    
T Consensus         3 r~i~L~~~iG~G~fG~Vy~~~~--~g~~VAvK~l~~~~-----~~~~~~e~Ei~~~~~l~H-pNIv~l~g~~~~~~~~~~   74 (303)
T 3hmm_A            3 RTIVLQESIGKGRFGEVWRGKW--RGEEVAVKIFSSRE-----ERSWFREAEIYQTVMLRH-ENILGFIAADNKDNGTWT   74 (303)
T ss_dssp             GGEEEEEEEEECSSSEEEEEEE--TTEEEEEEEECGGG-----HHHHHHHHHHHTSTTCCC-TTBCCEEEEEEEECSSSE
T ss_pred             cEEEEEEEEeeCCCeEEEEEEE--CCEEEEEEEECccc-----hhhHHHHHHHHHHhcCCC-CCCCcEEEEEEecCCCce
Confidence            4677889999999999999987  58899999996542     2233  345555567888 99999999987553    


Q ss_pred             eEEEEEeccCcccHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhhcc
Q psy8006          79 DMILLLELLTSAVDSKIRESFGSKSESGVQNCLEPSISVFSSLSKF  124 (126)
Q Consensus        79 ~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~l~~~  124 (126)
                      .+||||||+++|+|.++++. ..++...+..++.|++.|++|||..
T Consensus        75 ~~~lV~Ey~~~gsL~~~l~~-~~l~~~~~~~i~~~ia~gl~ylH~~  119 (303)
T 3hmm_A           75 QLWLVSDYHEHGSLFDYLNR-YTVTVEGMIKLALSTASGLAHLHME  119 (303)
T ss_dssp             EEEEEEECCTTCBHHHHHHH-CCBCHHHHHHHHHHHHHHHHHHHCC
T ss_pred             EEEEEecCCCCCcHHHHHHh-CCCCHHHHHHHHHHHHHHHHHHHHh
Confidence            58999999999999999976 4689999999999999999999964

>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}

Probab=99.92  E-value=4.9e-24  Score=141.84  Aligned_cols=123  Identities=15%  Similarity=0.197  Sum_probs=109.8

Q ss_pred             ccccccceeeccCccceeEEEEEEccCCcEEEEEEeecCCC-CchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeEE
Q psy8006           3 NIKNIISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRR-STDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMI   81 (126)
Q Consensus         3 ~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~-~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~~   81 (126)
                      ++++|...+.||+|+||.||.+.+..++..+|+|.+..... .......+.+|+.++..++| |||+++++.+...+..|
T Consensus        13 ~~~~y~i~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~il~~l~h-p~Iv~l~~~~~~~~~~~   91 (384)
T 4fr4_A           13 NFDHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEH-PFLVNLWYSFQDEEDMF   91 (384)
T ss_dssp             CGGGEEEEEEEECCTTCCEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCC-TTBCCEEEEEECSSEEE
T ss_pred             ChHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehhhcccHHHHHHHHHHHHHHHhCCC-CCCCcEEEEEEeCCEEE
Confidence            35678889999999999999999999999999999986532 12234568899999999998 99999999999999999


Q ss_pred             EEEeccCcccHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          82 LLLELLTSAVDSKIRESFGSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        82 lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      +||||+.+++|..++.....+++..++.++.|++.|++|||+.++
T Consensus        92 lv~e~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~LH~~gi  136 (384)
T 4fr4_A           92 MVVDLLLGGDLRYHLQQNVHFKEETVKLFICELVMALDYLQNQRI  136 (384)
T ss_dssp             EEECCCTTEEHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred             EEEecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCc
Confidence            999999999999999888889999999999999999999998763

>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7

Probab=99.92  E-value=4.3e-24  Score=139.01  Aligned_cols=123  Identities=13%  Similarity=0.166  Sum_probs=109.2

Q ss_pred             ccccccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCc-hhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeEE
Q psy8006           3 NIKNIISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRST-DLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMI   81 (126)
Q Consensus         3 ~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~-~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~~   81 (126)
                      ++++|...+.||+|+||.||++.+..++..+|+|.+....... .....+.+|..++..++| |||+++++.+......|
T Consensus         4 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~h-p~Iv~~~~~~~~~~~~~   82 (318)
T 1fot_A            4 SLQDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTH-PFIIRMWGTFQDAQQIF   82 (318)
T ss_dssp             CGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCB-TTBCCEEEEEECSSEEE
T ss_pred             ChHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhhCCC-CCCceEeEEEEeCCEEE
Confidence            4678889999999999999999999999999999998653211 223457889999999988 99999999999999999


Q ss_pred             EEEeccCcccHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          82 LLLELLTSAVDSKIRESFGSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        82 lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      +||||+++++|.+++.....+++..++.++.|++.|++|||+.++
T Consensus        83 lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~i  127 (318)
T 1fot_A           83 MIMDYIEGGELFSLLRKSQRFPNPVAKFYAAEVCLALEYLHSKDI  127 (318)
T ss_dssp             EEECCCCSCBHHHHHHHTSSCCHHHHHHHHHHHHHHHHHHHTTTE
T ss_pred             EEEeCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCc
Confidence            999999999999999887889999999999999999999998763

>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}

Probab=99.91  E-value=2.2e-23  Score=134.73  Aligned_cols=122  Identities=19%  Similarity=0.237  Sum_probs=108.8

Q ss_pred             cccccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeEEEE
Q psy8006           4 IKNIISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILL   83 (126)
Q Consensus         4 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~~lv   83 (126)
                      +++|...+.||+|+||.||+|.+..++..+|+|.+............+.+|+.++.+++| |||+++++.+...+..++|
T Consensus         2 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h-~~i~~~~~~~~~~~~~~lv   80 (311)
T 4agu_A            2 MEKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKH-PNLVNLLEVFRRKRRLHLV   80 (311)
T ss_dssp             -CCEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCCCC-HHHHHHHHHHHHHHHHCCC-TTBCCEEEEEEETTEEEEE
T ss_pred             cccceEeeEEeecCCeEEEEEEeCCCCcEEEEEEeeccccchHHHHHHHHHHHHHHhCCC-CCccchhheeecCCeEEEE
Confidence            356888899999999999999999999999999997765444445568899999999998 9999999999999999999


Q ss_pred             EeccCcccHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          84 LELLTSAVDSKIRESFGSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        84 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      |||+++++|.+++.....+++..+..++.|++.|++|||+.++
T Consensus        81 ~e~~~~~~l~~~~~~~~~~~~~~~~~i~~~l~~~l~~lH~~~i  123 (311)
T 4agu_A           81 FEYCDHTVLHELDRYQRGVPEHLVKSITWQTLQAVNFCHKHNC  123 (311)
T ss_dssp             EECCSEEHHHHHHHTSSCCCHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred             EEeCCCchHHHHHhhhcCCCHHHHHHHHHHHHHHHHHHHHCCC
Confidence            9999999999888877789999999999999999999998763

>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*

Probab=99.91  E-value=1e-23  Score=138.64  Aligned_cols=123  Identities=16%  Similarity=0.112  Sum_probs=107.3

Q ss_pred             ccccccceeeccCccceeEEEEEEccCCcEEEEEEeecCCC-CchhHHHHHHHHHHHHHh-cCCCCceeeeeeeEeCCeE
Q psy8006           3 NIKNIISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRR-STDLKAEILHEVAVLEAC-RCNSRIVQLHQVFESSHDM   80 (126)
Q Consensus         3 ~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~-~~~~~~~~~~e~~~l~~~-~~~~~iv~l~~~~~~~~~~   80 (126)
                      .+.+|...+.||+|+||.||+|.+..++..+|+|.+..... .........+|..++..+ +| |||+++++.+...+..
T Consensus        15 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~~~~h-p~iv~l~~~~~~~~~~   93 (345)
T 1xjd_A           15 KIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEH-PFLTHMFCTFQTKENL   93 (345)
T ss_dssp             -CTTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTC-TTBCCEEEEEECSSEE
T ss_pred             ChHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhHHhhhhhhHHHHHHHHHHHHhcCCC-CCCCcEEEEEEeCCEE
Confidence            35678889999999999999999999999999999986532 112234578899999887 56 9999999999999999


Q ss_pred             EEEEeccCcccHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          81 ILLLELLTSAVDSKIRESFGSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        81 ~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      |+||||+++++|.+++.....+++..+..++.|++.|++|||+.++
T Consensus        94 ~lv~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~i  139 (345)
T 1xjd_A           94 FFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQFLHSKGI  139 (345)
T ss_dssp             EEEEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred             EEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence            9999999999999999887889999999999999999999999764

>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}

Probab=99.91  E-value=3.8e-23  Score=133.71  Aligned_cols=120  Identities=14%  Similarity=0.150  Sum_probs=107.6

Q ss_pred             cccccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeEEEE
Q psy8006           4 IKNIISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILL   83 (126)
Q Consensus         4 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~~lv   83 (126)
                      ..+|...+.||+|+||.||++.+..++..+|+|.+...  .......+.+|+.++..++| |||+++++++..++..++|
T Consensus         9 ~~~~~~~~~lG~G~~g~V~~~~~~~~~~~va~K~~~~~--~~~~~~~~~~E~~~l~~l~h-p~iv~~~~~~~~~~~~~lv   85 (310)
T 3s95_A            9 PSDLIHGEVLGKGCFGQAIKVTHRETGEVMVMKELIRF--DEETQRTFLKEVKVMRCLEH-PNVLKFIGVLYKDKRLNFI   85 (310)
T ss_dssp             GGGEEEEEEEECCSSEEEEEEEETTTCCEEEEEEESCC--CHHHHHHHHHHHHHHTTCCC-TTBCCEEEEEEETTEEEEE
T ss_pred             hhHeeccceecCCCCEEEEEEEECCCCcEEEEEEeccC--CHHHHHHHHHHHHHHHhCCC-cCcccEEEEEecCCeeEEE
Confidence            56788899999999999999999999999999988543  23445569999999999998 9999999999999999999


Q ss_pred             EeccCcccHHHHHHh-cCCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          84 LELLTSAVDSKIRES-FGSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        84 ~e~~~~~~L~~~~~~-~~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      |||+++++|.++++. ...+++..+..++.|++.|++|||+.++
T Consensus        86 ~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~~i  129 (310)
T 3s95_A           86 TEYIKGGTLRGIIKSMDSQYPWSQRVSFAKDIASGMAYLHSMNI  129 (310)
T ss_dssp             EECCTTCBHHHHHHHCCTTSCHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred             EEecCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCc
Confidence            999999999999986 4679999999999999999999998763

>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*

Probab=99.91  E-value=1.3e-23  Score=143.38  Aligned_cols=121  Identities=21%  Similarity=0.263  Sum_probs=108.4

Q ss_pred             ccccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeEEEEE
Q psy8006           5 KNIISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLL   84 (126)
Q Consensus         5 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~~lv~   84 (126)
                      ..|...+.||+|+||.||+|.+..++..+|+|++............+.+|+.+++.++| |||+++++++......|+||
T Consensus        22 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h-pniv~~~~~~~~~~~~~lv~  100 (486)
T 3mwu_A           22 ERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDH-PNIMKLFEILEDSSSFYIVG  100 (486)
T ss_dssp             HHEEEEEEEECCSSSEEEEEEETTTCCEEEEEEEEHHHHBCSCHHHHHHHHHHHHHCCC-TTBCCEEEEEECSSEEEEEE
T ss_pred             cceEEeEEEeecCCEEEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHHHhCCC-CCcCeEEEEEEcCCEEEEEE
Confidence            34667889999999999999999999999999997654333345578999999999998 99999999999999999999


Q ss_pred             eccCcccHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          85 ELLTSAVDSKIRESFGSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        85 e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      ||+.+++|.+.+.....+++..+..++.|++.|+.|||+.++
T Consensus       101 e~~~~~~L~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~i  142 (486)
T 3mwu_A          101 ELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKHNI  142 (486)
T ss_dssp             CCCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred             EcCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence            999999998888777889999999999999999999999874

>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...

Probab=99.91  E-value=1e-23  Score=138.78  Aligned_cols=123  Identities=17%  Similarity=0.259  Sum_probs=109.0

Q ss_pred             ccccccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCC-chhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeEE
Q psy8006           3 NIKNIISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRS-TDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMI   81 (126)
Q Consensus         3 ~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~-~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~~   81 (126)
                      .+++|...+.||+|+||.||.+.+..++..+|+|.+...... ......+.+|+.++..++| |||+++++.+......|
T Consensus        39 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~h-p~iv~~~~~~~~~~~~~  117 (350)
T 1rdq_E           39 QLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF-PFLVKLEFSFKDNSNLY  117 (350)
T ss_dssp             CGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCC-TTBCCEEEEEECSSEEE
T ss_pred             CHHHCEEEEEeecCcCcEEEEEEECCCCCEEEEEEEEhHHhccHHHHHHHHHHHHHHHhCCC-CCCCeEEEEEEcCCEEE
Confidence            356788899999999999999999999999999999865321 1234468899999999988 99999999999999999


Q ss_pred             EEEeccCcccHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          82 LLLELLTSAVDSKIRESFGSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        82 lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      +||||+++++|.+++.....+++..++.++.|++.|++|||+.++
T Consensus       118 lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~i  162 (350)
T 1rdq_E          118 MVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDL  162 (350)
T ss_dssp             EEEECCTTCBHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred             EEEcCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCc
Confidence            999999999999999887889999999999999999999998763

>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*

Probab=99.91  E-value=3.2e-23  Score=132.44  Aligned_cols=121  Identities=19%  Similarity=0.240  Sum_probs=110.1

Q ss_pred             ccccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeEEEEE
Q psy8006           5 KNIISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLL   84 (126)
Q Consensus         5 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~~lv~   84 (126)
                      ++|...+.||+|+||.||+|.+..++..+|+|.+............+.+|+.++..++| |||+++++.+..++..+++|
T Consensus         6 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h-~~i~~~~~~~~~~~~~~~v~   84 (284)
T 3kk8_A            6 DNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQH-PNIVRLHDSIQEESFHYLVF   84 (284)
T ss_dssp             TTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCHHHHHHHHHHHHHHHHCCC-TTBCCEEEEEECSSEEEEEE
T ss_pred             hhhhhhhhhcCcCCeEEEEEEEcCCCceEEEEEeecccCCHHHHHHHHHHHHHHHHcCC-CCcCeEEEEEEcCCEEEEEE
Confidence            56888899999999999999999999999999998776655555678999999999998 99999999999999999999


Q ss_pred             eccCcccHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          85 ELLTSAVDSKIRESFGSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        85 e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      |++++++|.+.+..+..+++..+..++.|++.|++|||+.++
T Consensus        85 e~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i  126 (284)
T 3kk8_A           85 DLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHSNGI  126 (284)
T ss_dssp             CCCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred             ecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCc
Confidence            999999998888877889999999999999999999998763

>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}

Probab=99.91  E-value=2.5e-23  Score=142.49  Aligned_cols=121  Identities=19%  Similarity=0.271  Sum_probs=104.1

Q ss_pred             ccccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCc-----------hhHHHHHHHHHHHHHhcCCCCceeeeee
Q psy8006           5 KNIISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRST-----------DLKAEILHEVAVLEACRCNSRIVQLHQV   73 (126)
Q Consensus         5 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~-----------~~~~~~~~e~~~l~~~~~~~~iv~l~~~   73 (126)
                      ..|...+.||+|+||.||+|.+..++..+|+|.+.......           .....+.+|+.++..++| |||++++++
T Consensus        36 ~~Y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h-pniv~~~~~  114 (504)
T 3q5i_A           36 ESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDH-PNIIKLFDV  114 (504)
T ss_dssp             GTEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEC----------------CTHHHHHHHHHHHHTCCC-TTBCCEEEE
T ss_pred             cceEEEeEecccCCeEEEEEEECCCCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHhCCC-CCCCeEEEE
Confidence            45777899999999999999999999999999998754321           234568999999999998 999999999


Q ss_pred             eEeCCeEEEEEeccCcccHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          74 FESSHDMILLLELLTSAVDSKIRESFGSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        74 ~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      +..+...++||||+++++|.+.+.....+++..+..++.|++.|++|||+.++
T Consensus       115 ~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i  167 (504)
T 3q5i_A          115 FEDKKYFYLVTEFYEGGELFEQIINRHKFDECDAANIMKQILSGICYLHKHNI  167 (504)
T ss_dssp             EECSSEEEEEEECCTTCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred             EEcCCEEEEEEecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence            99999999999999999999888877889999999999999999999998763

>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*

Probab=99.91  E-value=5.5e-23  Score=134.14  Aligned_cols=124  Identities=17%  Similarity=0.214  Sum_probs=111.1

Q ss_pred             cccccccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeEE
Q psy8006           2 NNIKNIISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMI   81 (126)
Q Consensus         2 ~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~~   81 (126)
                      +.++.|...+.||+|+||.||+|.+..++..+|+|.+............+.+|+.++..++| |||+++++++...+..+
T Consensus        22 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h-~~iv~~~~~~~~~~~~~  100 (331)
T 4aaa_A           22 QSMEKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRH-ENLVNLLEVCKKKKRWY  100 (331)
T ss_dssp             BCGGGEEEEEEGGGGTTSSEEEEEETTTCCEEEEEEEESCSSCHHHHHHHHHHHHHHHHCCC-TTBCCEEEEEEETTEEE
T ss_pred             hhhhhheeeeEEeecCCEEEEEEEECCCCceEEEEEEecCCCchHHHHHHHHHHHHHhhCCC-CCEeeEEEEeecCCEEE
Confidence            35678888999999999999999999999999999998765544445568899999999998 99999999999999999


Q ss_pred             EEEeccCcccHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          82 LLLELLTSAVDSKIRESFGSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        82 lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      +||||+++++|..+......+++..+..++.|++.|++|||+.++
T Consensus       101 lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~i  145 (331)
T 4aaa_A          101 LVFEFVDHTILDDLELFPNGLDYQVVQKYLFQIINGIGFCHSHNI  145 (331)
T ss_dssp             EEEECCSEEHHHHHHHSTTCCCHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred             EEEecCCcchHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHCCE
Confidence            999999999888887776789999999999999999999998764

>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*

Probab=99.91  E-value=5.1e-23  Score=131.40  Aligned_cols=121  Identities=15%  Similarity=0.145  Sum_probs=107.4

Q ss_pred             ccccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHh-cCCCCceeeeeeeEeCCeEEEE
Q psy8006           5 KNIISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEAC-RCNSRIVQLHQVFESSHDMILL   83 (126)
Q Consensus         5 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~-~~~~~iv~l~~~~~~~~~~~lv   83 (126)
                      .+|...+.||+|+||.||+|.+..++..+|+|.+............+.+|+..+..+ +| |||+++++.+..++..++|
T Consensus        11 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~~h-~~iv~~~~~~~~~~~~~lv   89 (289)
T 1x8b_A           11 TEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQH-SHVVRYFSAWAEDDHMLIQ   89 (289)
T ss_dssp             HHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCCTTSHHHHHHHHHHHHHHHSCSC-TTBCCEEEEEEETTEEEEE
T ss_pred             chhhhhhhhcCCCceEEEEEEEcCCCceEEEEEecccccccHHHHHHHHHHHHHHHhCCC-CCeeeeeeeeecCCeEEEE
Confidence            457778999999999999999999999999999987655555556788999999999 66 9999999999999999999


Q ss_pred             EeccCcccHHHHHHhc----CCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          84 LELLTSAVDSKIRESF----GSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        84 ~e~~~~~~L~~~~~~~----~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      |||+++++|.+++...    ..+++..+..++.|++.|++|||+.++
T Consensus        90 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~i  136 (289)
T 1x8b_A           90 NEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSMSL  136 (289)
T ss_dssp             EECCTTCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred             EEecCCCcHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHHhCCE
Confidence            9999999999988754    569999999999999999999998763

>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*

Probab=99.91  E-value=1.5e-23  Score=143.23  Aligned_cols=120  Identities=23%  Similarity=0.230  Sum_probs=102.7

Q ss_pred             cccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeEEEEEe
Q psy8006           6 NIISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLLE   85 (126)
Q Consensus         6 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~~lv~e   85 (126)
                      .|...+.||+|+||.||+|.+..++..+|+|.+............+.+|+.+++.++| |||+++++++......|+|||
T Consensus        38 ~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h-pniv~~~~~~~~~~~~~lv~e  116 (494)
T 3lij_A           38 MYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDH-PNIMKLYDFFEDKRNYYLVME  116 (494)
T ss_dssp             HEEEEEEEECC---EEEEEEETTTCCEEEEEEEEC-----CTTHHHHHHHHHHTTCCC-TTBCCEEEEEECSSEEEEEEE
T ss_pred             CeEEeeEEecCCCEEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHhCCC-CCCCeEEEEEEeCCEEEEEEe
Confidence            4677889999999999999999999999999998765444444568999999999998 999999999999999999999


Q ss_pred             ccCcccHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          86 LLTSAVDSKIRESFGSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        86 ~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      |+++++|.+.+.....+++..+..++.|++.|+.|||+.++
T Consensus       117 ~~~~g~L~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i  157 (494)
T 3lij_A          117 CYKGGELFDEIIHRMKFNEVDAAVIIKQVLSGVTYLHKHNI  157 (494)
T ss_dssp             CCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred             cCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCc
Confidence            99999998888877889999999999999999999998763

>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*

Probab=99.91  E-value=2e-23  Score=136.24  Aligned_cols=122  Identities=17%  Similarity=0.177  Sum_probs=105.2

Q ss_pred             ccccccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeEEE
Q psy8006           3 NIKNIISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMIL   82 (126)
Q Consensus         3 ~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~~l   82 (126)
                      .+++|...+.||+|+||.||+|.+..++..+|+|.+............+.+|+.++..++| |||+++++.+......++
T Consensus        32 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h-~~iv~~~~~~~~~~~~~l  110 (329)
T 3gbz_A           32 SIDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQH-RNIIELKSVIHHNHRLHL  110 (329)
T ss_dssp             CGGGEEEEEEEEECSSSEEEEEEETTTTEEEEEEECCCCC--------CHHHHHHGGGCCC-TTBCCEEEEEEETTEEEE
T ss_pred             chhhEEEEEEEEecCCeEEEEEEECCCCceEEEEEEcccccccccchhHHHHHHHHHHcCC-CCcceEEEEEecCCEEEE
Confidence            3567888999999999999999999999999999998765444444567899999999998 999999999999999999


Q ss_pred             EEeccCcccHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          83 LLELLTSAVDSKIRESFGSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        83 v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      ||||+++ +|.+++.....+++..+..++.|++.|++|||+.++
T Consensus       111 v~e~~~~-~L~~~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~~i  153 (329)
T 3gbz_A          111 IFEYAEN-DLKKYMDKNPDVSMRVIKSFLYQLINGVNFCHSRRC  153 (329)
T ss_dssp             EEECCSE-EHHHHHHHCTTCCHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred             EEecCCC-CHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhCCE
Confidence            9999996 699999887889999999999999999999998764

>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A

Probab=99.91  E-value=3.8e-23  Score=134.80  Aligned_cols=113  Identities=22%  Similarity=0.371  Sum_probs=102.2

Q ss_pred             ceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeEEEEEeccC
Q psy8006           9 SSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLLELLT   88 (126)
Q Consensus         9 ~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~~lv~e~~~   88 (126)
                      .++.||+|+||.||+|.+..++..+|+|.+...     ......+|+.++..+.+||||+++++++......|+||||++
T Consensus        15 ~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~-----~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~   89 (325)
T 3kn6_A           15 KDKPLGEGSFSICRKCVHKKSNQAFAVKIISKR-----MEANTQKEITALKLCEGHPNIVKLHEVFHDQLHTFLVMELLN   89 (325)
T ss_dssp             TSCCSEEETTEEEEEEEETTTCCEEEEEEEEGG-----GHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECCCC
T ss_pred             CCCccccCCCeEEEEEEECCCCCEEEEEEEChh-----hhhhHHHHHHHHHHhcCCCCeeEEEEEEEcCCEEEEEEEccC
Confidence            467899999999999999999999999999753     234678899999999844999999999999999999999999


Q ss_pred             cccHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          89 SAVDSKIRESFGSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        89 ~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      +++|.+++..+..+++..+..++.|++.|++|||+.++
T Consensus        90 ~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~LH~~~i  127 (325)
T 3kn6_A           90 GGELFERIKKKKHFSETEASYIMRKLVSAVSHMHDVGV  127 (325)
T ss_dssp             SCBHHHHHHHCSCCCHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred             CCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCC
Confidence            99999999888889999999999999999999998763

>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*

Probab=99.91  E-value=1.2e-23  Score=138.57  Aligned_cols=123  Identities=15%  Similarity=0.113  Sum_probs=107.8

Q ss_pred             cccccceeeccCccceeEEEEEEccCCcEEEEEEeecCCC-CchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeEEE
Q psy8006           4 IKNIISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRR-STDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMIL   82 (126)
Q Consensus         4 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~-~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~~l   82 (126)
                      +.+|...+.||+|+||.||++.+..++..+|+|.+..... .......+.+|..++..+.+||+|+++++.+...+..|+
T Consensus        19 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~l   98 (353)
T 2i0e_A           19 LTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYF   98 (353)
T ss_dssp             CTTEEEEEEEEEETTEEEEEEEETTEEEEEEEEEEEHHHHHHTTCHHHHHHHHHHHTCTTCCTTBCCEEEEEECSSEEEE
T ss_pred             hHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhcchHHHHHHHHHHHHHhcCCCCEEeeEEEEEEcCCEEEE
Confidence            4678888999999999999999999999999999986532 122344578899999888555999999999999999999


Q ss_pred             EEeccCcccHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          83 LLELLTSAVDSKIRESFGSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        83 v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      ||||+++++|.+++...+.+++..++.++.|++.|++|||+.++
T Consensus        99 v~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~gi  142 (353)
T 2i0e_A           99 VMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQSKGI  142 (353)
T ss_dssp             EEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred             EEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCE
Confidence            99999999999999887889999999999999999999999874

>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}

Probab=99.91  E-value=8.5e-24  Score=143.98  Aligned_cols=122  Identities=18%  Similarity=0.259  Sum_probs=109.2

Q ss_pred             cccccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCc-hhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeEEE
Q psy8006           4 IKNIISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRST-DLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMIL   82 (126)
Q Consensus         4 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~-~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~~l   82 (126)
                      +.+|...+.||+|+||.||.|.+..+|..+|+|++....... .....+.+|+.+++.++| |||+++++.+..++..|+
T Consensus        15 ~~~Y~l~~~LG~G~fg~V~~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~Ei~~l~~l~H-pnIv~l~~~~~~~~~~~l   93 (476)
T 2y94_A           15 IGHYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRH-PHIIKLYQVISTPSDIFM   93 (476)
T ss_dssp             ETTEEEEEEEECCSSSCEEEEEETTTCCEEEEEEEEHHHHHHTTTHHHHHHHHHHHTTCCC-TTBCCEEEEEECSSEEEE
T ss_pred             ecCEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhCCC-CCCCcEEEEEEECCEEEE
Confidence            567888999999999999999999999999999998653321 234468899999999998 999999999999999999


Q ss_pred             EEeccCcccHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          83 LLELLTSAVDSKIRESFGSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        83 v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      ||||+++++|.+++..++.+++..++.++.|++.|++|||+.++
T Consensus        94 v~E~~~gg~L~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~gi  137 (476)
T 2y94_A           94 VMEYVSGGELFDYICKNGRLDEKESRRLFQQILSGVDYCHRHMV  137 (476)
T ss_dssp             EEECCSSEEHHHHTTSSSSCCHHHHHHHHHHHHHHHHHHHTTTE
T ss_pred             EEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCC
Confidence            99999999999999887889999999999999999999998763

>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*

Probab=99.91  E-value=7e-23  Score=132.03  Aligned_cols=119  Identities=14%  Similarity=0.181  Sum_probs=106.1

Q ss_pred             cccccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeEEEE
Q psy8006           4 IKNIISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILL   83 (126)
Q Consensus         4 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~~lv   83 (126)
                      ...|...+.||+|+||.||+|.+..++..+|+|.+......  ....+.+|+.++..++| |||+++++.+..++..++|
T Consensus        19 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~--~~~~~~~E~~~l~~l~h-p~iv~~~~~~~~~~~~~lv   95 (297)
T 3fxz_A           19 KKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQP--KKELIINEILVMRENKN-PNIVNYLDSYLVGDELWVV   95 (297)
T ss_dssp             GGTBCCCEEEEEETTEEEEEEEBTTTCCEEEEEEEEGGGCS--CHHHHHHHHHHHHHCCC-TTBCCEEEEEEETTEEEEE
T ss_pred             hhceeeeeeeccCCCeEEEEEEECCCCcEEEEEEeeccccc--HHHHHHHHHHHHhcCCC-CCCCeEeEEEEECCEEEEE
Confidence            45678889999999999999999999999999999865432  23468899999999998 9999999999999999999


Q ss_pred             EeccCcccHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          84 LELLTSAVDSKIRESFGSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        84 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      |||+++++|.+++... .+++..+..++.|++.|++|||+.++
T Consensus        96 ~e~~~~~~L~~~~~~~-~~~~~~~~~~~~qi~~~l~~lH~~~i  137 (297)
T 3fxz_A           96 MEYLAGGSLTDVVTET-CMDEGQIAAVCRECLQALEFLHSNQV  137 (297)
T ss_dssp             EECCTTCBHHHHHHHS-CCCHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred             EECCCCCCHHHHHhhc-CCCHHHHHHHHHHHHHHHHHHHhCCc
Confidence            9999999999998764 69999999999999999999998763

>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*

Probab=99.91  E-value=1.3e-23  Score=136.99  Aligned_cols=121  Identities=16%  Similarity=0.098  Sum_probs=105.7

Q ss_pred             cccccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeEEEE
Q psy8006           4 IKNIISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILL   83 (126)
Q Consensus         4 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~~lv   83 (126)
                      +.+|...+.||+|+||.||+|.+..++..+|+|.+...... .....+.+|+.++..++| |||+++++.+..++..|+|
T Consensus         6 ~~~y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~E~~~l~~l~h-pnIv~~~~~~~~~~~~~lv   83 (323)
T 3tki_A            6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAV-DCPENIKKEICINKMLNH-ENVVKFYGHRREGNIQYLF   83 (323)
T ss_dssp             TTCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC--------CHHHHHHHHHHCCC-TTBCCEEEEEECSSEEEEE
T ss_pred             hhhceeeeEEecCCCEEEEEEEECCCCcEEEEEEEEccccc-chHHHHHHHHHHHHhCCC-CCCCeEEEEEecCCeEEEE
Confidence            46788899999999999999999999999999999765432 122358899999999998 9999999999999999999


Q ss_pred             EeccCcccHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          84 LELLTSAVDSKIRESFGSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        84 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      |||+++++|.+++.....+++..+..++.|++.|++|||+.++
T Consensus        84 ~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~gi  126 (323)
T 3tki_A           84 LEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGI  126 (323)
T ss_dssp             EECCTTEEGGGGSBTTTBCCHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred             EEcCCCCcHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHCCc
Confidence            9999999999998877789999999999999999999998763

>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7

Probab=99.91  E-value=6e-23  Score=133.72  Aligned_cols=118  Identities=18%  Similarity=0.309  Sum_probs=105.3

Q ss_pred             ccccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeEEEEE
Q psy8006           5 KNIISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLL   84 (126)
Q Consensus         5 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~~lv~   84 (126)
                      +.|...+.||+|+||.||+|.+..++..+|+|.+....   .....+.+|+.++..++| |||+++++.+...+..++||
T Consensus         5 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~---~~~~~~~~E~~~l~~l~h-pnIv~~~~~~~~~~~~~lv~   80 (321)
T 1tki_A            5 EKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKG---TDQVLVKKEISILNIARH-RNILHLHESFESMEELVMIF   80 (321)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCT---HHHHHHHHHHHHHHHSCC-TTBCCEEEEEEETTEEEEEE
T ss_pred             hceEeeeEEecCCCeEEEEEEECCCCcEEEEEEEecCc---ccHHHHHHHHHHHHhCCC-CCCCeEeEEEecCCEEEEEE
Confidence            46778899999999999999999999999999997542   234458899999999998 99999999999999999999


Q ss_pred             eccCcccHHHHHHhc-CCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          85 ELLTSAVDSKIRESF-GSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        85 e~~~~~~L~~~~~~~-~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      ||+++++|.+++... ..+++..+..++.|++.|+.|||+.++
T Consensus        81 e~~~g~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~gi  123 (321)
T 1tki_A           81 EFISGLDIFERINTSAFELNEREIVSYVHQVCEALQFLHSHNI  123 (321)
T ss_dssp             CCCCCCBHHHHHTSSSCCCCHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred             EeCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCC
Confidence            999999999988764 479999999999999999999998763

>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}

Probab=99.91  E-value=8.8e-24  Score=138.48  Aligned_cols=122  Identities=16%  Similarity=0.218  Sum_probs=106.7

Q ss_pred             ccccccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCc-hhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeEE
Q psy8006           3 NIKNIISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRST-DLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMI   81 (126)
Q Consensus         3 ~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~-~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~~   81 (126)
                      .+.+|...+.||+|+||.||+|.+..++..+|+|.+....... .....+.+|+.+++.++| |||+++++.+..++..+
T Consensus         7 ~i~~Y~i~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~h-pnIv~l~~~~~~~~~~~   85 (336)
T 3h4j_B            7 HIGPYIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRH-PHIIKLYDVITTPTDIV   85 (336)
T ss_dssp             EETTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCSHHHHHHHHHHTTCCC-TTBCCEEEEEECSSEEE
T ss_pred             ccCCEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEehHHccchhHHHHHHHHHHHHHhCCC-CCCCeEEEEEEeCCEEE
Confidence            4678889999999999999999999999999999998653221 223468899999999998 99999999999999999


Q ss_pred             EEEeccCcccHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          82 LLLELLTSAVDSKIRESFGSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        82 lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      +||||+ +|+|.+++..+..+++..++.++.|++.|++|||+.++
T Consensus        86 lv~E~~-~g~l~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~gi  129 (336)
T 3h4j_B           86 MVIEYA-GGELFDYIVEKKRMTEDEGRRFFQQIICAIEYCHRHKI  129 (336)
T ss_dssp             EEECCC-CEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred             EEEECC-CCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence            999999 56688888777889999999999999999999998764

>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A

Probab=99.91  E-value=7.1e-23  Score=131.52  Aligned_cols=119  Identities=11%  Similarity=0.072  Sum_probs=104.3

Q ss_pred             ccccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCc-hhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeEEEE
Q psy8006           5 KNIISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRST-DLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILL   83 (126)
Q Consensus         5 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~-~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~~lv   83 (126)
                      ..|...+.||+|+||.||+|.+..+++.+|+|.+....... .....+.+|+..+..++| |||+++++++..++..|+|
T Consensus        31 ~~y~i~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h-p~iv~~~~~~~~~~~~~lv  109 (286)
T 3uqc_A           31 GRYRLLIFHGGVPPLQFWQALDTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRIDK-PGVARVLDVVHTRAGGLVV  109 (286)
T ss_dssp             TTEEEEEEEEBSTTCEEEEEEETTTTEEEEEEESCTTCCSCHHHHHHHHHHHHHHHTCCC-TTBCCEEEEEEETTEEEEE
T ss_pred             CcEEEEEEEcccCCeEEEEEEecCCCceEEEEEECcccccCHHHHHHHHHHHHHHhcCCC-CCcceeeEEEEECCcEEEE
Confidence            35778899999999999999999999999999998765533 334568999999999998 9999999999999999999


Q ss_pred             EeccCcccHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          84 LELLTSAVDSKIRESFGSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        84 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      |||+++++|.++++.+  ....++..++.|++.|++|||+.++
T Consensus       110 ~e~~~g~~L~~~l~~~--~~~~~~~~i~~ql~~aL~~lH~~gi  150 (286)
T 3uqc_A          110 AEWIRGGSLQEVADTS--PSPVGAIRAMQSLAAAADAAHRAGV  150 (286)
T ss_dssp             EECCCEEEHHHHHTTC--CCHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred             EEecCCCCHHHHHhcC--CChHHHHHHHHHHHHHHHHHHHCCC
Confidence            9999999999998653  4666789999999999999998864

>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A

Probab=99.91  E-value=1.2e-22  Score=131.62  Aligned_cols=115  Identities=17%  Similarity=0.261  Sum_probs=102.4

Q ss_pred             eeeccCccceeEEEEEEccCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeEEEEEeccCc
Q psy8006          10 SIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLLELLTS   89 (126)
Q Consensus        10 ~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~~lv~e~~~~   89 (126)
                      ++.||+|+||.||+|.+..++..+|+|.+....  ......+.+|+.++.++..||||+++++.+..++..++||||+++
T Consensus        18 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~   95 (316)
T 2ac3_A           18 EDVLGEGAHARVQTCINLITSQEYAVKIIEKQP--GHIRSRVFREVEMLYQCQGHRNVLELIEFFEEEDRFYLVFEKMRG   95 (316)
T ss_dssp             CCCCCCCSSEEEEEEECSSSCCEEEEEEEECCS--SCCHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCTT
T ss_pred             CceecCCceEEEEEEEEcCCCcEEEEEEEeeCc--chhHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEEEEEEEcCCC
Confidence            578999999999999999999999999997653  233456889999999964349999999999999999999999999


Q ss_pred             ccHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          90 AVDSKIRESFGSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        90 ~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      ++|.+++.....+++..+..++.|++.|++|||+.++
T Consensus        96 ~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i  132 (316)
T 2ac3_A           96 GSILSHIHKRRHFNELEASVVVQDVASALDFLHNKGI  132 (316)
T ss_dssp             CBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred             CcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCc
Confidence            9999999887889999999999999999999998764

>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A

Probab=99.90  E-value=3.9e-23  Score=135.68  Aligned_cols=116  Identities=16%  Similarity=0.202  Sum_probs=102.5

Q ss_pred             ccccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeEEEEE
Q psy8006           5 KNIISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLL   84 (126)
Q Consensus         5 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~~lv~   84 (126)
                      ++|...+.||+|+||.||+|.+..++..+|+|.+......      ..+|++++.++..||||+++++.+..+...|+||
T Consensus        22 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~------~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~   95 (342)
T 2qr7_A           22 DGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKRD------PTEEIEILLRYGQHPNIITLKDVYDDGKYVYVVT   95 (342)
T ss_dssp             HHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTTCC------CHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEE
T ss_pred             ccEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEcccCC------hHHHHHHHHHhcCCCCcCeEEEEEEcCCEEEEEE
Confidence            3467788999999999999999999999999999865432      3468888888843499999999999999999999


Q ss_pred             eccCcccHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          85 ELLTSAVDSKIRESFGSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        85 e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      ||+++++|.+++.....+++..+..++.|++.|++|||+.++
T Consensus        96 E~~~gg~L~~~i~~~~~~~~~~~~~~~~qi~~al~~lH~~gi  137 (342)
T 2qr7_A           96 ELMKGGELLDKILRQKFFSEREASAVLFTITKTVEYLHAQGV  137 (342)
T ss_dssp             CCCCSCBHHHHHHTCTTCCHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred             eCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCc
Confidence            999999999999887889999999999999999999998763

>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*

Probab=99.90  E-value=6.2e-23  Score=139.83  Aligned_cols=120  Identities=21%  Similarity=0.235  Sum_probs=108.1

Q ss_pred             cccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCC-chhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeEEEEE
Q psy8006           6 NIISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRS-TDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLL   84 (126)
Q Consensus         6 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~-~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~~lv~   84 (126)
                      .|...+.||+|+||.||+|.+..++..+|+|++...... ......+.+|+.++..++| |||+++++++...+..++||
T Consensus        27 ~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~h-pniv~~~~~~~~~~~~~lv~  105 (484)
T 3nyv_A           27 RYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDH-PNIMKLYEFFEDKGYFYLVG  105 (484)
T ss_dssp             HEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCBSSCHHHHHHHHHHHTTCCC-TTBCCEEEEEECSSEEEEEE
T ss_pred             ceEEeeEEecCCCEEEEEEEECCCCCEEEEEEEEhhhcccchHHHHHHHHHHHHHhCCC-CCCCcEEEEEEeCCEEEEEE
Confidence            466788999999999999999999999999999876543 2335569999999999998 99999999999999999999


Q ss_pred             eccCcccHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          85 ELLTSAVDSKIRESFGSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        85 e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      |++.+++|.+.+..+..+++..+..++.|++.|++|||+.++
T Consensus       106 e~~~~~~L~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i  147 (484)
T 3nyv_A          106 EVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYMHKNKI  147 (484)
T ss_dssp             CCCCSCBHHHHHHTCSCCBHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred             ecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence            999999999988887889999999999999999999998764

>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A

Probab=99.90  E-value=7.7e-23  Score=132.97  Aligned_cols=120  Identities=25%  Similarity=0.403  Sum_probs=107.5

Q ss_pred             cccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCch----hHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeEE
Q psy8006           6 NIISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTD----LKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMI   81 (126)
Q Consensus         6 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~----~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~~   81 (126)
                      .|...+.||+|+||.||+|.+..++..+|+|.+........    ....+.+|+.++..++| ||++++++.+...+..+
T Consensus        13 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h-~~iv~~~~~~~~~~~~~   91 (321)
T 2a2a_A           13 FYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLH-HNVITLHDVYENRTDVV   91 (321)
T ss_dssp             HEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSSSCSSSBCHHHHHHHHHHHHHCCC-TTBCCEEEEEECSSEEE
T ss_pred             cEEEeeEeeecCCEEEEEEEECCCCeEEEEEEEecccccccccchhHHHHHHHHHHHHhCCC-CCcceEEEEEecCCEEE
Confidence            46778999999999999999999999999999987644221    24568999999999998 99999999999999999


Q ss_pred             EEEeccCcccHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          82 LLLELLTSAVDSKIRESFGSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        82 lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      +||||+++++|.+++.....+++..+..++.|++.|++|||+.++
T Consensus        92 lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~lH~~~i  136 (321)
T 2a2a_A           92 LILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHTKKI  136 (321)
T ss_dssp             EEECCCCSCBHHHHHHTCSCEEHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred             EEEEcCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCe
Confidence            999999999999999887889999999999999999999998763

>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*

Probab=99.90  E-value=1.6e-23  Score=141.32  Aligned_cols=122  Identities=15%  Similarity=0.140  Sum_probs=106.0

Q ss_pred             cccccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCc-hhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeEEE
Q psy8006           4 IKNIISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRST-DLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMIL   82 (126)
Q Consensus         4 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~-~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~~l   82 (126)
                      .++|...+.||+|+||.||++.+..++..+|+|++....... .....+.+|..++..++| |||+++++.+..++..|+
T Consensus        73 ~~~y~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~E~~il~~~~h-p~Iv~l~~~~~~~~~~~l  151 (437)
T 4aw2_A           73 REDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDS-KWITTLHYAFQDDNNLYL  151 (437)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTTTCCHHHHHHHHHHSCT-TTBCCEEEEEECSSEEEE
T ss_pred             hhheEEEEEEEeCCCEEEEEEEEcCCCcEEEEEEEEHHHhhhHHHHHHHHHHHHHHHhCCC-CCEEEEEEEEeeCCEEEE
Confidence            457888899999999999999999999999999997643211 111237889999999988 999999999999999999


Q ss_pred             EEeccCcccHHHHHHh-cCCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          83 LLELLTSAVDSKIRES-FGSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        83 v~e~~~~~~L~~~~~~-~~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      ||||+++|+|.+++.. ...+++..++.++.|++.|++|||+.++
T Consensus       152 V~Ey~~gg~L~~~l~~~~~~l~e~~~~~~~~qi~~aL~~LH~~gi  196 (437)
T 4aw2_A          152 VMDYYVGGDLLTLLSKFEDRLPEEMARFYLAEMVIAIDSVHQLHY  196 (437)
T ss_dssp             EECCCTTCBHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred             EEecCCCCcHHHHHHHccCCCCHHHHHHHHHHHHHHHHHHHhCCe
Confidence            9999999999999976 4689999999999999999999998763

>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...

Probab=99.90  E-value=1.3e-22  Score=129.62  Aligned_cols=121  Identities=29%  Similarity=0.449  Sum_probs=108.1

Q ss_pred             ccccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCch----hHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeE
Q psy8006           5 KNIISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTD----LKAEILHEVAVLEACRCNSRIVQLHQVFESSHDM   80 (126)
Q Consensus         5 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~----~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~   80 (126)
                      ++|...+.||+|+||.||++.+..++..+|+|.+........    ....+.+|+.++..++| |||+++++.+..+...
T Consensus         5 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h-~~i~~~~~~~~~~~~~   83 (283)
T 3bhy_A            5 DHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRH-PNIITLHDIFENKTDV   83 (283)
T ss_dssp             HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCC-TTBCCEEEEEECSSEE
T ss_pred             hhhhhHHhhcccCceEEEEEEEcCCCCeeehHHhhhccccccccchHHHHHHHHHHHHHhCCC-CCeeehhheecCCCeE
Confidence            357778999999999999999999999999999987654221    24568999999999998 9999999999999999


Q ss_pred             EEEEeccCcccHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          81 ILLLELLTSAVDSKIRESFGSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        81 ~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      +++||++++++|.+++..+..+++..+..++.|++.|+.|||+.++
T Consensus        84 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i  129 (283)
T 3bhy_A           84 VLILELVSGGELFDFLAEKESLTEDEATQFLKQILDGVHYLHSKRI  129 (283)
T ss_dssp             EEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred             EEEEeecCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCc
Confidence            9999999999999999877889999999999999999999998763

>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A

Probab=99.90  E-value=1.6e-22  Score=129.68  Aligned_cols=120  Identities=17%  Similarity=0.171  Sum_probs=106.8

Q ss_pred             ccccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEe----CCeE
Q psy8006           5 KNIISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFES----SHDM   80 (126)
Q Consensus         5 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~----~~~~   80 (126)
                      ..|...+.||+|+||.||+|.+..++..+|+|.+............+.+|+.++..++| |||+++++.+..    ....
T Consensus        26 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~va~k~~~~~~~~~~~~~~~~~e~~~l~~l~h-~~iv~~~~~~~~~~~~~~~~  104 (290)
T 1t4h_A           26 RFLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQH-PNIVRFYDSWESTVKGKKCI  104 (290)
T ss_dssp             CEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCC-TTBCCEEEEEEEESSSCEEE
T ss_pred             eeEEeeeeccCCCCeEEEEeEecCCceEEEEEEecchhhCHHHHHHHHHHHHHHHhCCC-CCeeeeeeeeccccCCCceE
Confidence            34666788999999999999999999999999998776655556679999999999998 999999998864    3568


Q ss_pred             EEEEeccCcccHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhhccC
Q psy8006          81 ILLLELLTSAVDSKIRESFGSKSESGVQNCLEPSISVFSSLSKFE  125 (126)
Q Consensus        81 ~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~l~~~~  125 (126)
                      ++||||+++++|.+++.....+++..+..++.|++.|+.|||+.+
T Consensus       105 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~  149 (290)
T 1t4h_A          105 VLVTELMTSGTLKTYLKRFKVMKIKVLRSWCRQILKGLQFLHTRT  149 (290)
T ss_dssp             EEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTSS
T ss_pred             EEEEEecCCCCHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHcCC
Confidence            999999999999999988788999999999999999999999876

>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*

Probab=99.90  E-value=1.5e-23  Score=140.57  Aligned_cols=121  Identities=13%  Similarity=0.159  Sum_probs=105.0

Q ss_pred             cccccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCc-hhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeEEE
Q psy8006           4 IKNIISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRST-DLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMIL   82 (126)
Q Consensus         4 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~-~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~~l   82 (126)
                      ..+|...+.||+|+||.||++.+..++..+|+|++....... .....+.+|..++..++| |||+++++++......|+
T Consensus        68 ~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~k~~~~~~~~~~~~~~E~~il~~l~h-p~Iv~l~~~~~~~~~~~l  146 (410)
T 3v8s_A           68 AEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANS-PWVVQLFYAFQDDRYLYM  146 (410)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTCCCSTHHHHHHHHHHCCC-TTBCCEEEEEECSSEEEE
T ss_pred             ccccEEEEEEEcCCCEEEEEEEECCCCcEEEEEEEehhhhhhhHHHHHHHHHHHHHHhCCC-CCCCeEEEEEEECCEEEE
Confidence            456788899999999999999999999999999997632211 112247789999999998 999999999999999999


Q ss_pred             EEeccCcccHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          83 LLELLTSAVDSKIRESFGSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        83 v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      ||||+++|+|.++++. ..+++..++.++.|++.|++|||+.++
T Consensus       147 V~E~~~gg~L~~~l~~-~~~~e~~~~~~~~qi~~aL~~LH~~gi  189 (410)
T 3v8s_A          147 VMEYMPGGDLVNLMSN-YDVPEKWARFYTAEVVLALDAIHSMGF  189 (410)
T ss_dssp             EECCCTTEEHHHHHHH-CCCCHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred             EEeCCCCCcHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence            9999999999998875 569999999999999999999998764

>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...

Probab=99.90  E-value=4.1e-23  Score=131.79  Aligned_cols=123  Identities=15%  Similarity=0.173  Sum_probs=109.7

Q ss_pred             ccccccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCc-hhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeEE
Q psy8006           3 NIKNIISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRST-DLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMI   81 (126)
Q Consensus         3 ~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~-~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~~   81 (126)
                      ++.+|...+.||+|+||.||++.+..++..+|+|.+....... .....+.+|+.++..++| |||+++++++...+..+
T Consensus         7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h-~~i~~~~~~~~~~~~~~   85 (279)
T 3fdn_A            7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH-PNILRLYGYFHDATRVY   85 (279)
T ss_dssp             CGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHTTCCC-TTBCCEEEEEECSSEEE
T ss_pred             ecccEEEeeEEecCCCeEEEEEEEccCCcEEEEEEEeccccchhhHHHHHHHHHHHHHcCCC-CCCcchhheEecCCEEE
Confidence            5788999999999999999999999999999999997653322 223458899999999998 99999999999999999


Q ss_pred             EEEeccCcccHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          82 LLLELLTSAVDSKIRESFGSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        82 lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      ++|||+++++|.+++.....+++..+..++.|++.|++|||+.++
T Consensus        86 lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~~~i  130 (279)
T 3fdn_A           86 LILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRV  130 (279)
T ss_dssp             EEECCCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTTTC
T ss_pred             EEEecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCE
Confidence            999999999999999877889999999999999999999998764

>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A

Probab=99.90  E-value=3.2e-23  Score=136.38  Aligned_cols=120  Identities=16%  Similarity=0.192  Sum_probs=103.1

Q ss_pred             cccceeeccCccceeEEEEEEccCCcEEEEEEeecCCC---CchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeEEE
Q psy8006           6 NIISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRR---STDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMIL   82 (126)
Q Consensus         6 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~---~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~~l   82 (126)
                      .|...+.||+|+||.||+|.+..++..+|+|.+.....   .......+.+|+.++..++| |||+++++.+..++..|+
T Consensus        25 ~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h-pnIv~~~~~~~~~~~~~l  103 (351)
T 3c0i_A           25 VYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKH-PHIVELLETYSSDGMLYM  103 (351)
T ss_dssp             HEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHTSSSCCHHHHHHHHHHHHHCCC-TTBCCEEEEEEETTEEEE
T ss_pred             ceEEeeEEeeCCCEEEEEEEECCCCCEEEEEEEEhhhccccccchHHHHHHHHHHHHhCCC-CCCCcEEEEEEeCCEEEE
Confidence            46678899999999999999999999999999975422   11124568999999999998 999999999999999999


Q ss_pred             EEeccCcccHHHHHHhc----CCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          83 LLELLTSAVDSKIRESF----GSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        83 v~e~~~~~~L~~~~~~~----~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      ||||+++++|.+.+...    ..+++..+..++.|++.|++|||+.++
T Consensus       104 v~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~i  151 (351)
T 3c0i_A          104 VFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDNNI  151 (351)
T ss_dssp             EEECCSSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred             EEeCCCCCCHHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHCCc
Confidence            99999999997766432    358999999999999999999998763

>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*

Probab=99.90  E-value=8.6e-23  Score=132.33  Aligned_cols=119  Identities=18%  Similarity=0.179  Sum_probs=105.4

Q ss_pred             cccccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeEEEE
Q psy8006           4 IKNIISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILL   83 (126)
Q Consensus         4 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~~lv   83 (126)
                      ..+|...+.||+|+||.||++.+  ++..+|+|.+............+.+|+.++.+++| |||+++++.+...+..++|
T Consensus        36 ~~~y~i~~~lG~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h-p~iv~~~~~~~~~~~~~lv  112 (309)
T 3p86_A           36 WCDLNIKEKIGAGSFGTVHRAEW--HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRH-PNIVLFMGAVTQPPNLSIV  112 (309)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEE--TTEEEEEEEECCCCCSHHHHHHHHHHHHHHHHCCC-TTBCCEEEEECSTTCCEEE
T ss_pred             hhHceeeeEeecCCCeEEEEEEE--CCCcEEEEEecCCCCCHHHHHHHHHHHHHHHhCCC-CCEeeEEEEEEECCceEEE
Confidence            45677889999999999999976  57889999998776555555678999999999998 9999999999999999999


Q ss_pred             EeccCcccHHHHHHhcC---CCCHHHHHHHHHHHHHHHHhhhccC
Q psy8006          84 LELLTSAVDSKIRESFG---SKSESGVQNCLEPSISVFSSLSKFE  125 (126)
Q Consensus        84 ~e~~~~~~L~~~~~~~~---~~~~~~~~~~~~qi~~~l~~l~~~~  125 (126)
                      |||+++++|.+++....   .+++..+..++.|++.|++|||+.+
T Consensus       113 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~  157 (309)
T 3p86_A          113 TEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNRN  157 (309)
T ss_dssp             EECCTTCBHHHHHHSTTHHHHSCHHHHHHHHHHHHHHHHHHHTSS
T ss_pred             EecCCCCcHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCC
Confidence            99999999999987644   3999999999999999999999976

>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}

Probab=99.90  E-value=2.3e-23  Score=139.68  Aligned_cols=122  Identities=16%  Similarity=0.162  Sum_probs=105.9

Q ss_pred             cccccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCc-hhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeEEE
Q psy8006           4 IKNIISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRST-DLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMIL   82 (126)
Q Consensus         4 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~-~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~~l   82 (126)
                      .++|...+.||+|+||.||++.+..++..+|+|++.+..... .....+.+|..++..++| |+|+++++.+.+.+..|+
T Consensus        60 ~~~f~~~~~lG~G~fG~V~~~~~~~~~~~vAiK~l~k~~~~~~~~~~~~~~E~~il~~~~h-p~Iv~l~~~~~~~~~~~l  138 (412)
T 2vd5_A           60 RDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDR-RWITQLHFAFQDENYLYL  138 (412)
T ss_dssp             GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHGGGCCHHHHHHHHHHSCT-TTBCCEEEEEECSSEEEE
T ss_pred             hhhEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhcCC-CCeeeEEEEEeeCCEEEE
Confidence            467888899999999999999999999999999997643211 112247889999999988 999999999999999999


Q ss_pred             EEeccCcccHHHHHHhc-CCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          83 LLELLTSAVDSKIRESF-GSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        83 v~e~~~~~~L~~~~~~~-~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      ||||+++++|.+++... ..+++..++.++.|++.|++|||+.++
T Consensus       139 VmE~~~gg~L~~~l~~~~~~l~~~~~~~~~~qi~~aL~~LH~~gi  183 (412)
T 2vd5_A          139 VMEYYVGGDLLTLLSKFGERIPAEMARFYLAEIVMAIDSVHRLGY  183 (412)
T ss_dssp             EECCCCSCBHHHHHHHHSSCCCHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred             EEcCCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence            99999999999998764 479999999999999999999998764

>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*

Probab=99.90  E-value=1.4e-22  Score=130.14  Aligned_cols=122  Identities=14%  Similarity=0.175  Sum_probs=108.8

Q ss_pred             cccccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCc-hhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeEEE
Q psy8006           4 IKNIISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRST-DLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMIL   82 (126)
Q Consensus         4 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~-~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~~l   82 (126)
                      ...|...+.||+|+||.||++.+..++..+|+|.+....... .....+.+|+.+++.++| |||+++++.+...+..++
T Consensus        14 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~l~h-~~iv~~~~~~~~~~~~~l   92 (294)
T 2rku_A           14 RRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAH-QHVVGFHGFFEDNDFVFV   92 (294)
T ss_dssp             TEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCC-TTBCCEEEEEECSSEEEE
T ss_pred             ccceEEEEEEeecCCEEEEEEEECCCCceEEEEEechhhccCHHHHHHHHHHHHHHHhCCC-CCEeeeeeeeccCCEEEE
Confidence            356788999999999999999999999999999998765433 334468899999999998 999999999999999999


Q ss_pred             EEeccCcccHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          83 LLELLTSAVDSKIRESFGSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        83 v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      +||++++++|.+++.....+++..+..++.|++.|++|||+.++
T Consensus        93 v~e~~~~~~L~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i  136 (294)
T 2rku_A           93 VLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRV  136 (294)
T ss_dssp             EEECCTTCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred             EEecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCc
Confidence            99999999999998887889999999999999999999998763

>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*

Probab=99.90  E-value=3.2e-23  Score=137.52  Aligned_cols=122  Identities=17%  Similarity=0.177  Sum_probs=99.6

Q ss_pred             cccccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCch-hHHHHHHHHHH-HHHhcCCCCceeeeeeeEeCCeEE
Q psy8006           4 IKNIISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTD-LKAEILHEVAV-LEACRCNSRIVQLHQVFESSHDMI   81 (126)
Q Consensus         4 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~-~~~~~~~e~~~-l~~~~~~~~iv~l~~~~~~~~~~~   81 (126)
                      .++|...+.||+|+||.||++.+..++..+|+|++........ ....+.+|..+ +..++| |||+++++.+...+..|
T Consensus        37 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~e~~~ll~~~~h-p~Iv~l~~~~~~~~~~~  115 (373)
T 2r5t_A           37 PSDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKH-PFLVGLHFSFQTADKLY  115 (373)
T ss_dssp             GGGEEEEEEEECCTTCEEEEEEETTTCCEEEEEEEEGGGBC-------------CCBCCCCC-TTBCCEEEEEECSSEEE
T ss_pred             hhheEEEEEEeeCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHHhCCC-CCCCCEEEEEEeCCEEE
Confidence            4678889999999999999999999999999999987654322 22346667666 455677 99999999999999999


Q ss_pred             EEEeccCcccHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          82 LLLELLTSAVDSKIRESFGSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        82 lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      +||||+++++|.+++.....+++..++.++.|++.|++|||+.++
T Consensus       116 lv~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~gi  160 (373)
T 2r5t_A          116 FVLDYINGGELFYHLQRERCFLEPRARFYAAEIASALGYLHSLNI  160 (373)
T ss_dssp             EEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred             EEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCc
Confidence            999999999999999887889999999999999999999999874

>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*

Probab=99.90  E-value=1.6e-22  Score=132.19  Aligned_cols=122  Identities=14%  Similarity=0.175  Sum_probs=109.0

Q ss_pred             cccccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCc-hhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeEEE
Q psy8006           4 IKNIISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRST-DLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMIL   82 (126)
Q Consensus         4 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~-~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~~l   82 (126)
                      ...|...+.||+|+||.||++.+..++..+|+|.+....... .....+.+|+.++..++| |||+++++.+...+..++
T Consensus        40 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~~l~~l~h-~~iv~~~~~~~~~~~~~l  118 (335)
T 2owb_A           40 RRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAH-QHVVGFHGFFEDNDFVFV  118 (335)
T ss_dssp             TEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCC-TTBCCEEEEEECSSEEEE
T ss_pred             CCceEEEEEEeeCCCeEEEEEEECCCCCEEEEEEechhhhcCHHHHHHHHHHHHHHHhCCC-CCCCeEEEEEecCCeEEE
Confidence            356788899999999999999999999999999998765433 334568999999999998 999999999999999999


Q ss_pred             EEeccCcccHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          83 LLELLTSAVDSKIRESFGSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        83 v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      +|||+++++|.+++..+..+++..+..++.|++.|++|||+.++
T Consensus       119 v~e~~~~~~L~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~i  162 (335)
T 2owb_A          119 VLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRV  162 (335)
T ss_dssp             EECCCTTCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred             EEecCCCCCHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCC
Confidence            99999999999998887889999999999999999999998763

>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*

Probab=99.90  E-value=1.1e-22  Score=132.65  Aligned_cols=122  Identities=21%  Similarity=0.160  Sum_probs=101.4

Q ss_pred             cccccceeeccCccceeEEEEEEc---cCCcEEEEEEeecCCCCc--hhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCC
Q psy8006           4 IKNIISSIINDMGKYATVRRCRDR---KNGTQYAAKFLRKKRRST--DLKAEILHEVAVLEACRCNSRIVQLHQVFESSH   78 (126)
Q Consensus         4 ~~~~~~~~~lg~g~~~~v~~~~~~---~~~~~~aiK~~~~~~~~~--~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~   78 (126)
                      ..+|...+.||+|+||.||++.+.   .++..+|+|.+.......  .....+.+|+.++..++| |||+++++.+...+
T Consensus        16 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h-p~iv~~~~~~~~~~   94 (327)
T 3a62_A           16 PECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKH-PFIVDLIYAFQTGG   94 (327)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEECSSTTTTCEEEEEEECCC--------------HHHHHHHCCC-TTBCCEEEEEECSS
T ss_pred             HHHeEEEEEEEeCCCEEEEEEEEeccCCCCcEEEEEEEEHHHhhhhhhHHHHHHHHHHHHHhCCC-CCccceeEEEEcCC
Confidence            456788899999999999999985   688999999998754321  223457889999999998 99999999999999


Q ss_pred             eEEEEEeccCcccHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          79 DMILLLELLTSAVDSKIRESFGSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        79 ~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      ..|+||||+++++|.+++.....+++..+..++.|++.|++|||+.++
T Consensus        95 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~al~~lH~~~i  142 (327)
T 3a62_A           95 KLYLILEYLSGGELFMQLEREGIFMEDTACFYLAEISMALGHLHQKGI  142 (327)
T ss_dssp             CEEEEEECCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred             EEEEEEeCCCCCcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCE
Confidence            999999999999999999887889999999999999999999998764

>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*

Probab=99.90  E-value=2.1e-22  Score=129.01  Aligned_cols=121  Identities=21%  Similarity=0.263  Sum_probs=108.6

Q ss_pred             ccccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeEEEEE
Q psy8006           5 KNIISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLL   84 (126)
Q Consensus         5 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~~lv~   84 (126)
                      ..|...+.||+|+||.||+|.+..++..+|+|.+............+.+|+.++.+++| |||+++++.+...+..++++
T Consensus        22 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h-~~i~~~~~~~~~~~~~~lv~  100 (287)
T 2wei_A           22 ERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDH-PNIMKLFEILEDSSSFYIVG  100 (287)
T ss_dssp             HHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGBSSSCHHHHHHHHHHHHTCCC-TTBCCEEEEEECSSEEEEEE
T ss_pred             hcceeeEEEcCCCCEEEEEEEEcCCCcEEEEEEecccccchHHHHHHHHHHHHHHhccC-CCccEEEEEEeCCCeEEEEE
Confidence            35777889999999999999999999999999998765544445678999999999998 99999999999999999999


Q ss_pred             eccCcccHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          85 ELLTSAVDSKIRESFGSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        85 e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      |++++++|.+.+.....+++..+..++.|++.|++|||+.++
T Consensus       101 e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~LH~~~i  142 (287)
T 2wei_A          101 ELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKHNI  142 (287)
T ss_dssp             CCCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred             EccCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence            999999998888777789999999999999999999998764

>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}

Probab=99.90  E-value=1.5e-22  Score=131.05  Aligned_cols=123  Identities=11%  Similarity=0.080  Sum_probs=108.9

Q ss_pred             ccccccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCch-hHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeEE
Q psy8006           3 NIKNIISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTD-LKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMI   81 (126)
Q Consensus         3 ~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~-~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~~   81 (126)
                      .+.+|...+.||+|+||.||++.+..++..+|+|.+........ ....+.+|+.++..++| |||+++++.+..++..+
T Consensus        32 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h-p~iv~~~~~~~~~~~~~  110 (309)
T 2h34_A           32 QFGPYRLRRLVGRGGMGDVYEAEDTVRERIVALKLMSETLSSDPVFRTRMQREARTAGRLQE-PHVVPIHDFGEIDGQLY  110 (309)
T ss_dssp             --CCEEEEEEEEECSSSEEEEEEETTTTEEEEEEECGGGGGGSHHHHHHHHHHHHHHTTCCC-TTBCCEEEEEEETTEEE
T ss_pred             EeccEEEEEEEcCCCCeeEEEEEEcCCCeEEEEEecCcccccCHHHHHHHHHHHHHHhhcCC-CCeeEEEEEEeeCCeEE
Confidence            35678889999999999999999999999999999986544332 34568999999999998 99999999999999999


Q ss_pred             EEEeccCcccHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          82 LLLELLTSAVDSKIRESFGSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        82 lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      +++|++++++|.+++.....+++..+..++.|++.|++|||+.++
T Consensus       111 lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i  155 (309)
T 2h34_A          111 VDMRLINGVDLAAMLRRQGPLAPPRAVAIVRQIGSALDAAHAAGA  155 (309)
T ss_dssp             EEEECCCCEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred             EEEEecCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCcC
Confidence            999999999999999887889999999999999999999998764

>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*

Probab=99.90  E-value=3.3e-23  Score=134.20  Aligned_cols=121  Identities=14%  Similarity=0.103  Sum_probs=105.5

Q ss_pred             ccccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCc-hhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCC----e
Q psy8006           5 KNIISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRST-DLKAEILHEVAVLEACRCNSRIVQLHQVFESSH----D   79 (126)
Q Consensus         5 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~-~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~----~   79 (126)
                      +.|...+.||+|+||.||++.+..++..+|+|.+....... .....+.+|+.++..++| |||+++++.+....    .
T Consensus        12 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h-p~iv~~~~~~~~~~~~~~~   90 (311)
T 3ork_A           12 DRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNH-PAIVAVYDTGEAETPAGPL   90 (311)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECTTTTTSHHHHHHHHHHHTTCCCCCC-TTBCCEEEEEEEEETTEEE
T ss_pred             CcEEEEEEEccCCCEEEEEEEECCCCceEEEEEeCccccCCHHHHHHHHHHHHHHHcCCC-CCcceEEEeeeccCCCCcc
Confidence            45777899999999999999999999999999998765433 334468899999999998 99999999986544    3


Q ss_pred             EEEEEeccCcccHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          80 MILLLELLTSAVDSKIRESFGSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        80 ~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      .|+||||+++++|.+++.....+++..+..++.|++.|++|||+.++
T Consensus        91 ~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i  137 (311)
T 3ork_A           91 PYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQNGI  137 (311)
T ss_dssp             EEEEEECCCEEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred             cEEEEecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCC
Confidence            59999999999999999887889999999999999999999998764

>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*

Probab=99.90  E-value=1.8e-22  Score=128.61  Aligned_cols=119  Identities=17%  Similarity=0.156  Sum_probs=107.0

Q ss_pred             ccccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeEEEEE
Q psy8006           5 KNIISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLL   84 (126)
Q Consensus         5 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~~lv~   84 (126)
                      +.|...+.||+|+||.||++.+..++..+|+|.+......  ....+.+|+.++..++| |||+++++.+......++||
T Consensus         9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~--~~~~~~~E~~~l~~l~h-~~i~~~~~~~~~~~~~~lv~   85 (277)
T 3f3z_A            9 QYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVE--DVDRFKQEIEIMKSLDH-PNIIRLYETFEDNTDIYLVM   85 (277)
T ss_dssp             HHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCS--CHHHHHHHHHHHHTCCC-TTBCCEEEEEECSSEEEEEE
T ss_pred             hhEEeeeEEeecCCEEEEEEEeCCCCcEEEEEeehhhccc--hHHHHHHHHHHHHhCCC-CCEeeEEEEEecCCeEEEEE
Confidence            4577788999999999999999999999999999875432  24468899999999998 99999999999999999999


Q ss_pred             eccCcccHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          85 ELLTSAVDSKIRESFGSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        85 e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      ||+++++|.+++..+..+++..+..++.|++.|++|||+.++
T Consensus        86 e~~~~~~L~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i  127 (277)
T 3f3z_A           86 ELCTGGELFERVVHKRVFRESDAARIMKDVLSAVAYCHKLNV  127 (277)
T ss_dssp             ECCCSCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred             eccCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCc
Confidence            999999999988877889999999999999999999998763

>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}

Probab=99.90  E-value=8.4e-23  Score=138.38  Aligned_cols=120  Identities=15%  Similarity=0.105  Sum_probs=95.6

Q ss_pred             ccccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeC-----Ce
Q psy8006           5 KNIISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESS-----HD   79 (126)
Q Consensus         5 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~-----~~   79 (126)
                      +.|...+.||+|+||.||+|.+..++..||+|.+............+.+|+.++..++| |||+++++++...     ..
T Consensus        53 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~h-~niv~l~~~~~~~~~~~~~~  131 (458)
T 3rp9_A           53 DRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNH-DHVVKVLDIVIPKDVEKFDE  131 (458)
T ss_dssp             TTEEECCC-------CEEEEEECC--CEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCC-TTBCCEEEECCCSCTTTCCC
T ss_pred             CCeEEeeEeeecCCeEEEEEEECCCCcEEEEEEechhhcCHHHHHHHHHHHHHHHhCCC-CCCCceEEEEecCCcccCce
Confidence            45778899999999999999999999999999997655444445678999999999998 9999999998433     46


Q ss_pred             EEEEEeccCcccHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          80 MILLLELLTSAVDSKIRESFGSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        80 ~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      +|+|||++++ +|.+++.....+++..++.++.|++.||+|||+.++
T Consensus       132 ~~lv~e~~~~-~L~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~i  177 (458)
T 3rp9_A          132 LYVVLEIADS-DFKKLFRTPVYLTELHIKTLLYNLLVGVKYVHSAGI  177 (458)
T ss_dssp             EEEEECCCSE-EHHHHHHSSCCCCHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred             EEEEEecccc-chhhhcccCCCCCHHHHHHHHHHHHHHHHHHHhCCc
Confidence            8999999865 588888887789999999999999999999998764

>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*

Probab=99.90  E-value=1.3e-22  Score=131.59  Aligned_cols=120  Identities=17%  Similarity=0.232  Sum_probs=99.8

Q ss_pred             cccccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeEEEE
Q psy8006           4 IKNIISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILL   83 (126)
Q Consensus         4 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~~lv   83 (126)
                      +++|...+.||+|+||.||+|.+. ++..+|+|.+............+.+|+.++..++| |||+++++.+..+...++|
T Consensus        20 ~~~y~~~~~lG~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h-p~iv~~~~~~~~~~~~~lv   97 (311)
T 3niz_A           20 MEKYQKLEKVGEGTYGVVYKAKDS-QGRIVALKRIRLDAEDEGIPSTAIREISLLKELHH-PNIVSLIDVIHSERCLTLV   97 (311)
T ss_dssp             SCEEEEEEEEEECSSCEEEEEEET-TSCEEEEEEEC------CHHHHHHHHHHHHHHCCC-TTBCCEEEEECCSSCEEEE
T ss_pred             HhhhHhhhhccCCCCeEEEEEEEC-CCCEEEEEEEecccccchhhHHHHHHHHHHHHcCC-CCEeeeeeEEccCCEEEEE
Confidence            356788899999999999999985 48899999998665444445578899999999998 9999999999999999999


Q ss_pred             EeccCcccHHHHHHh-cCCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          84 LELLTSAVDSKIRES-FGSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        84 ~e~~~~~~L~~~~~~-~~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      |||++++ |.+++.. ...+++..+..++.|++.|++|||+.++
T Consensus        98 ~e~~~~~-l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~i  140 (311)
T 3niz_A           98 FEFMEKD-LKKVLDENKTGLQDSQIKIYLYQLLRGVAHCHQHRI  140 (311)
T ss_dssp             EECCSEE-HHHHHHTCTTCCCHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred             EcCCCCC-HHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCc
Confidence            9999975 6666654 4569999999999999999999998763

>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}

Probab=99.90  E-value=1.7e-22  Score=131.24  Aligned_cols=120  Identities=21%  Similarity=0.182  Sum_probs=103.8

Q ss_pred             ccccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCC--eEEE
Q psy8006           5 KNIISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSH--DMIL   82 (126)
Q Consensus         5 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~--~~~l   82 (126)
                      ..|...+.||+|+||.||+|.+..++..+|+|.+....... ....+.+|+.++..++| |||+++++++....  ..++
T Consensus         9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~-~~~~~~~E~~~l~~l~h-~~iv~~~~~~~~~~~~~~~l   86 (319)
T 4euu_A            9 HLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLR-PVDVQMREFEVLKKLNH-KNIVKLFAIEEETTTRHKVL   86 (319)
T ss_dssp             EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGS-CHHHHHHHHHHHHHCCC-TTBCCEEEEEECTTTCCEEE
T ss_pred             CCEEEEEEecCCCCeEEEEEEECCCCcEEEEEEeccccccc-hHHHHHHHHHHHHhcCC-CCcceEEEEeecCCCceEEE
Confidence            45788899999999999999999999999999998654322 24467899999999998 99999999987655  7899


Q ss_pred             EEeccCcccHHHHHHhcC---CCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          83 LLELLTSAVDSKIRESFG---SKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        83 v~e~~~~~~L~~~~~~~~---~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      ||||+++++|.+++....   .+++..+..++.|++.|++|||+.++
T Consensus        87 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~i  133 (319)
T 4euu_A           87 IMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENGI  133 (319)
T ss_dssp             EEECCTTCBHHHHHHSGGGTTCCCHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred             EEeCCCCCCHHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHCCE
Confidence            999999999999987533   39999999999999999999998763

>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*

Probab=99.90  E-value=1.2e-22  Score=136.85  Aligned_cols=120  Identities=17%  Similarity=0.145  Sum_probs=106.1

Q ss_pred             ccccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeC-----Ce
Q psy8006           5 KNIISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESS-----HD   79 (126)
Q Consensus         5 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~-----~~   79 (126)
                      .+|...+.||+|+||.||+|.+..++..||+|.+............+.+|+.+++.++| |||+++++.+...     ..
T Consensus        26 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~h-~nIv~l~~~~~~~~~~~~~~  104 (432)
T 3n9x_A           26 DNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKS-DYIIRLYDLIIPDDLLKFDE  104 (432)
T ss_dssp             TTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSTTTSHHHHHHHHHHHHHHHHCCC-TTBCCEEEECCCSCTTTCCC
T ss_pred             CCEEEEEEEeecCCEEEEEEEECCCCcEEEEEEeCchhcChHHHHHHHHHHHHHHHcCC-CCcceEEEEEecCCCCcCCe
Confidence            46788999999999999999999999999999998665444445679999999999998 9999999998765     56


Q ss_pred             EEEEEeccCcccHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          80 MILLLELLTSAVDSKIRESFGSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        80 ~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      .|+|||++++ +|.++++.+..+++..++.++.|++.|++|||+.++
T Consensus       105 ~~lv~e~~~~-~L~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~gi  150 (432)
T 3n9x_A          105 LYIVLEIADS-DLKKLFKTPIFLTEEHIKTILYNLLLGENFIHESGI  150 (432)
T ss_dssp             EEEEEECCSE-EHHHHHHSSCCCCHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred             EEEEEecCCc-CHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCC
Confidence            9999999886 699999887789999999999999999999998763

>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*

Probab=99.90  E-value=4.5e-22  Score=127.91  Aligned_cols=123  Identities=21%  Similarity=0.323  Sum_probs=107.4

Q ss_pred             cccccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCc-------hhHHHHHHHHHHHHHhcCCCCceeeeeeeEe
Q psy8006           4 IKNIISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRST-------DLKAEILHEVAVLEACRCNSRIVQLHQVFES   76 (126)
Q Consensus         4 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~-------~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~   76 (126)
                      ..+|...+.||+|+||.||+|.+..++..+|+|.+.......       .....+.+|+.++.++.+||||+++++.+..
T Consensus        16 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~   95 (298)
T 1phk_A           16 YENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYET   95 (298)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEEC
T ss_pred             hhccceeeeecCCCceEEEEEEEcCcCceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeeeeeeecc
Confidence            356788899999999999999999999999999998654211       1234588999999999733999999999999


Q ss_pred             CCeEEEEEeccCcccHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          77 SHDMILLLELLTSAVDSKIRESFGSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        77 ~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      ++..++|||++++++|.+++..+..+++..+..++.|++.|+.|||+.++
T Consensus        96 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i  145 (298)
T 1phk_A           96 NTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVICALHKLNI  145 (298)
T ss_dssp             SSEEEEEEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred             CCeEEEEEeccCCCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCc
Confidence            99999999999999999999887889999999999999999999998763

>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...

Probab=99.90  E-value=7.9e-23  Score=130.77  Aligned_cols=123  Identities=17%  Similarity=0.203  Sum_probs=108.8

Q ss_pred             ccccccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCc-hhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeEE
Q psy8006           3 NIKNIISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRST-DLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMI   81 (126)
Q Consensus         3 ~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~-~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~~   81 (126)
                      ++++|...+.||+|+||.||.|.+..++..+|+|.+....... .....+.+|+.++..++| ||++++++.+...+..+
T Consensus        12 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h-~~i~~~~~~~~~~~~~~   90 (284)
T 2vgo_A           12 TIDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRH-PNILRMYNYFHDRKRIY   90 (284)
T ss_dssp             CGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCC-TTBCCEEEEEECSSEEE
T ss_pred             hhhhceeeheecCCCCeEEEEEEEcCCCcEEEEEEEcccccchHHHHHHHHHHHHHHhcCCC-CCEeeEEEEEEcCCEEE
Confidence            4578888999999999999999999999999999997643211 223468899999999998 99999999999999999


Q ss_pred             EEEeccCcccHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          82 LLLELLTSAVDSKIRESFGSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        82 lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      ++||++++++|.+++.....+++..+..++.|++.|+.|||+.++
T Consensus        91 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i  135 (284)
T 2vgo_A           91 LMLEFAPRGELYKELQKHGRFDEQRSATFMEELADALHYCHERKV  135 (284)
T ss_dssp             EEECCCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTTTE
T ss_pred             EEEEeCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCc
Confidence            999999999999999877789999999999999999999998763

>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}

Probab=99.90  E-value=2.2e-22  Score=130.85  Aligned_cols=121  Identities=12%  Similarity=0.124  Sum_probs=101.2

Q ss_pred             cccccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCC-----
Q psy8006           4 IKNIISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSH-----   78 (126)
Q Consensus         4 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~-----   78 (126)
                      +.+|...+.||+|+||.||+|.+..++..||+|.+..... ......+.+|+.++.+++| |||+++++.+....     
T Consensus         5 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~h-pniv~~~~~~~~~~~~~~~   82 (332)
T 3qd2_B            5 LTDFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNR-ELAREKVMREVKALAKLEH-PGIVRYFNAWLETPPEKWQ   82 (332)
T ss_dssp             HHHEEEEEEEECC-CSEEEEEEETTTCCEEEEEEEECCST-TTHHHHHHHHHHHHTSCCC-TTBCCEEEEEEECCSCHHH
T ss_pred             hhcCceeeEecCCCCeEEEEEEEcCCCcEEEEEEeecCCc-hhHHHHHHHHHHHHHhCCC-CCEeeEEEEEEEeccchhh
Confidence            3567788999999999999999999999999999986542 3335569999999999998 99999999875432     


Q ss_pred             ----------------------------------------------------eEEEEEeccCcccHHHHHHhcC---CCC
Q psy8006          79 ----------------------------------------------------DMILLLELLTSAVDSKIRESFG---SKS  103 (126)
Q Consensus        79 ----------------------------------------------------~~~lv~e~~~~~~L~~~~~~~~---~~~  103 (126)
                                                                          ..+++|||+++++|.+++....   ..+
T Consensus        83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~  162 (332)
T 3qd2_B           83 EEMDEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRCSLEDRE  162 (332)
T ss_dssp             HHHHC--------------------------------------------CCCEEEEEEECCCSSCHHHHHHTCCSGGGSC
T ss_pred             hhhhhhhhccccccccccCCCcccccccceeeccccCcccccccccCCCCCceEEEEEEecCCCCHHHHHhcccCccchh
Confidence                                                                3899999999999999998654   355


Q ss_pred             HHHHHHHHHHHHHHHHhhhccCC
Q psy8006         104 ESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus       104 ~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      +..+..++.|++.|++|||+.++
T Consensus       163 ~~~~~~i~~qi~~aL~~LH~~~i  185 (332)
T 3qd2_B          163 HGVCLHIFIQIAEAVEFLHSKGL  185 (332)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTTE
T ss_pred             hHHHHHHHHHHHHHHHHHHhCCe
Confidence            66789999999999999998763

>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}

Probab=99.90  E-value=1.5e-22  Score=133.11  Aligned_cols=116  Identities=22%  Similarity=0.264  Sum_probs=99.1

Q ss_pred             cccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeEEEEEe
Q psy8006           6 NIISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLLE   85 (126)
Q Consensus         6 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~~lv~e   85 (126)
                      .|...+.||+|+||.||+|.+..++..+|+|.+....    ....+.+|+.++..++| |||+++++.+..++..++|||
T Consensus        54 ~y~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~----~~~~~~~E~~~l~~l~h-~niv~~~~~~~~~~~~~lv~e  128 (349)
T 2w4o_A           54 FFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTV----DKKIVRTEIGVLLRLSH-PNIIKLKEIFETPTEISLVLE  128 (349)
T ss_dssp             TEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEC--------------CHHHHHCCC-TTBCCEEEEEECSSEEEEEEC
T ss_pred             cEEEeeEEeeCCCEEEEEEEECCCCcEEEEEEeccch----hHHHHHHHHHHHHhCCC-CCCcceeeeEecCCeEEEEEE
Confidence            3667889999999999999999999999999998643    12357889999999998 999999999999999999999


Q ss_pred             ccCcccHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          86 LLTSAVDSKIRESFGSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        86 ~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      |+++++|.+++..+..+++..+..++.|++.|++|||+.++
T Consensus       129 ~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~L~~LH~~~i  169 (349)
T 2w4o_A          129 LVTGGELFDRIVEKGYYSERDAADAVKQILEAVAYLHENGI  169 (349)
T ss_dssp             CCCSCBHHHHHTTCSSCCHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred             eCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence            99999999999887789999999999999999999998764

>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A

Probab=99.90  E-value=3.6e-22  Score=128.85  Aligned_cols=119  Identities=20%  Similarity=0.268  Sum_probs=104.5

Q ss_pred             ccccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeEEEEE
Q psy8006           5 KNIISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLL   84 (126)
Q Consensus         5 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~~lv~   84 (126)
                      +.|...+.||+|+||.||.+.+..++..+|+|.+......  ....+.+|+.++..++| |||+++++.+...+..+++|
T Consensus         9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~--~~~~~~~e~~~l~~l~h-~~i~~~~~~~~~~~~~~lv~   85 (304)
T 2jam_A            9 KTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAF--RDSSLENEIAVLKKIKH-ENIVTLEDIYESTTHYYLVM   85 (304)
T ss_dssp             HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECC--------HHHHHHHHHHHCCC-TTBCCEEEEEECSSEEEEEE
T ss_pred             ccceeeeeccCCCCceEEEEEECCCCCEEEEEEEeccccc--chHHHHHHHHHHHhCCC-CCeeehhhhcccCCEEEEEE
Confidence            3577789999999999999999999999999999865321  23358899999999998 99999999999999999999


Q ss_pred             eccCcccHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          85 ELLTSAVDSKIRESFGSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        85 e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      |++++++|.+++.....+++..+..++.|++.|+.|||+.++
T Consensus        86 e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i  127 (304)
T 2jam_A           86 QLVSGGELFDRILERGVYTEKDASLVIQQVLSAVKYLHENGI  127 (304)
T ss_dssp             CCCCSCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred             EcCCCccHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCc
Confidence            999999999988877889999999999999999999998764

>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*

Probab=99.89  E-value=8.4e-23  Score=129.53  Aligned_cols=120  Identities=12%  Similarity=0.055  Sum_probs=105.8

Q ss_pred             ccccccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeC--CeE
Q psy8006           3 NIKNIISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESS--HDM   80 (126)
Q Consensus         3 ~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~--~~~   80 (126)
                      ++++|...+.||+|+||.||+|.+.  +..+|+|.+............+.+|+.++..++| |||+++++++..+  +..
T Consensus         8 ~~~~y~~~~~lg~G~~g~V~~~~~~--~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h-~~iv~~~~~~~~~~~~~~   84 (271)
T 3kmu_A            8 DFKQLNFLTKLNENHSGELWKGRWQ--GNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSH-PNVLPVLGACQSPPAPHP   84 (271)
T ss_dssp             CGGGCEEEEEEEEETTEEEEEEEET--TEEEEEEEECCTTCCHHHHHHHHHHGGGGCCCSC-TTEECEEEEECTTTSSSC
T ss_pred             CHHHhHHHHHhcCCCcceEEEEEEC--CeeEEEEEecccccCHHHHHHHHHHHHHHHhcCC-CchhheEEEEccCCCCCe
Confidence            3567888999999999999999984  7889999998776555555679999999999998 9999999999876  688


Q ss_pred             EEEEeccCcccHHHHHHhcC--CCCHHHHHHHHHHHHHHHHhhhccC
Q psy8006          81 ILLLELLTSAVDSKIRESFG--SKSESGVQNCLEPSISVFSSLSKFE  125 (126)
Q Consensus        81 ~lv~e~~~~~~L~~~~~~~~--~~~~~~~~~~~~qi~~~l~~l~~~~  125 (126)
                      +++|||+++++|.+++....  .+++..+..++.|++.|++|||+.+
T Consensus        85 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~  131 (271)
T 3kmu_A           85 TLITHWMPYGSLYNVLHEGTNFVVDQSQAVKFALDMARGMAFLHTLE  131 (271)
T ss_dssp             EEEEECCTTCBHHHHHHSCSSCCCCHHHHHHHHHHHHHHHHHHTTSS
T ss_pred             EeeecccCCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhcCC
Confidence            99999999999999998654  5899999999999999999999876

>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}

Probab=99.89  E-value=4.3e-22  Score=127.58  Aligned_cols=120  Identities=19%  Similarity=0.222  Sum_probs=105.7

Q ss_pred             ccccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeEEEEE
Q psy8006           5 KNIISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLL   84 (126)
Q Consensus         5 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~~lv~   84 (126)
                      +.|...+.||+|+||.||++.+..++..+|+|.+...... .....+.+|+.++..++| |||+++++.+......++||
T Consensus        22 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~-~~~~~~~~E~~~l~~l~h-p~iv~~~~~~~~~~~~~lv~   99 (285)
T 3is5_A           22 DLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQ-VPMEQIEAEIEVLKSLDH-PNIIKIFEVFEDYHNMYIVM   99 (285)
T ss_dssp             HHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCC-SCHHHHHHHHHHHHTCCC-TTBCCEEEEEECSSEEEEEE
T ss_pred             hheeecceeccCCCeEEEEEEEccCCceEEEEEeeccccc-hhHHHHHHHHHHHHhCCC-chHHhHHHheecCCeEEEEE
Confidence            4577789999999999999999999999999999876432 234578999999999998 99999999999999999999


Q ss_pred             eccCcccHHHHHHh----cCCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          85 ELLTSAVDSKIRES----FGSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        85 e~~~~~~L~~~~~~----~~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      ||+++++|.+++..    ...+++..+..++.|++.|++|||+.++
T Consensus       100 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~i  145 (285)
T 3is5_A          100 ETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQHV  145 (285)
T ss_dssp             CCCSCCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred             EeCCCCcHHHHHHhhhhcccCCCHHHHHHHHHHHHHHHHHHHhCCE
Confidence            99999999877743    3579999999999999999999998764

>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7

Probab=99.89  E-value=2.1e-22  Score=134.15  Aligned_cols=119  Identities=19%  Similarity=0.295  Sum_probs=105.0

Q ss_pred             ccccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeEEEEE
Q psy8006           5 KNIISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLL   84 (126)
Q Consensus         5 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~~lv~   84 (126)
                      +.|...+.||+|+||.||+|.+..++..+|+|.+....  ......+.+|+.++..++| |||+++++.+......++||
T Consensus        51 ~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~--~~~~~~~~~E~~il~~l~h-pnIv~~~~~~~~~~~~~lv~  127 (387)
T 1kob_A           51 DYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPY--PLDKYTVKNEISIMNQLHH-PKLINLHDAFEDKYEMVLIL  127 (387)
T ss_dssp             GTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCS--HHHHHHHHHHHHHHTTCCS-TTBCCEEEEEECSSEEEEEE
T ss_pred             cceEEEEEEecCCCEEEEEEEECCCCCEEEEEEecccc--hhhHHHHHHHHHHHHhCCC-cCCCeEEEEEEeCCEEEEEE
Confidence            35677889999999999999999999999999997653  2223468899999999998 99999999999999999999


Q ss_pred             eccCcccHHHHHHhc-CCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          85 ELLTSAVDSKIRESF-GSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        85 e~~~~~~L~~~~~~~-~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      ||+++++|.+++... ..+++..+..++.|++.|++|||+.++
T Consensus       128 E~~~gg~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~gi  170 (387)
T 1kob_A          128 EFLSGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMHEHSI  170 (387)
T ss_dssp             ECCCCCBHHHHTTCTTCCBCHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred             EcCCCCcHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhCCe
Confidence            999999999888754 479999999999999999999998763

>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*

Probab=99.89  E-value=1.9e-22  Score=128.41  Aligned_cols=122  Identities=17%  Similarity=0.259  Sum_probs=108.1

Q ss_pred             cccccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCC-chhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeEEE
Q psy8006           4 IKNIISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRS-TDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMIL   82 (126)
Q Consensus         4 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~-~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~~l   82 (126)
                      ..+|...+.||+|+||.||.+.+..++..+|+|.+...... ......+.+|+.++..++| ||++++++.+..++..++
T Consensus        10 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h-~~i~~~~~~~~~~~~~~l   88 (276)
T 2h6d_A           10 IGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRH-PHIIKLYQVISTPTDFFM   88 (276)
T ss_dssp             ETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCC-TTBCCEEEEEECSSEEEE
T ss_pred             eccEEEEeeecCCCCeEEEEEEECCCCceEEEEEeccccccchhHHHHHHHHHHHHhcCCC-CCEeEEEEEEecCCeEEE
Confidence            45788899999999999999999999999999999765321 1234468899999999998 999999999999999999


Q ss_pred             EEeccCcccHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          83 LLELLTSAVDSKIRESFGSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        83 v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      +||++++++|.+++.....+++..+..++.|++.|++|||+.++
T Consensus        89 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i  132 (276)
T 2h6d_A           89 VMEYVSGGELFDYICKHGRVEEMEARRLFQQILSAVDYCHRHMV  132 (276)
T ss_dssp             EEECCCSCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHHCS
T ss_pred             EEeccCCCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCC
Confidence            99999999999999887889999999999999999999998764

>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*

Probab=99.89  E-value=9.7e-22  Score=127.08  Aligned_cols=123  Identities=15%  Similarity=0.156  Sum_probs=106.2

Q ss_pred             ccccccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCC-chhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeEE
Q psy8006           3 NIKNIISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRS-TDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMI   81 (126)
Q Consensus         3 ~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~-~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~~   81 (126)
                      .+.+|...+.||+|+||.||++.+..++..+|+|.+...... ......+.+|+.++..++| |||+++++.+...+..+
T Consensus        30 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h-~~i~~~~~~~~~~~~~~  108 (310)
T 2wqm_A           30 TLANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNH-PNVIKYYASFIEDNELN  108 (310)
T ss_dssp             SGGGEEEEEEEECC--CEEEEEEETTTCCEEEEEEECTTSSCCHHHHHHHHHHHHHHHTCCC-TTBCCEEEEEEETTEEE
T ss_pred             cccceEEEEeecCCCCceEEEEEEcCCCceEEEEeeehhhccCHHHHHHHHHHHHHHHhCCC-CCEeeEEEEEEcCCcEE
Confidence            456788899999999999999999999999999999864432 3334568999999999998 99999999999999999


Q ss_pred             EEEeccCcccHHHHHHh----cCCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          82 LLLELLTSAVDSKIRES----FGSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        82 lv~e~~~~~~L~~~~~~----~~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      ++||++++++|.+++..    ...+++..+..++.|++.|+.|||+.++
T Consensus       109 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~i  157 (310)
T 2wqm_A          109 IVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHSRRV  157 (310)
T ss_dssp             EEEECCCSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred             EEEecCCCCCHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHhhCCe
Confidence            99999999999888864    4569999999999999999999998764

>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*

Probab=99.89  E-value=1.3e-22  Score=132.34  Aligned_cols=117  Identities=35%  Similarity=0.529  Sum_probs=104.5

Q ss_pred             eeeccCccceeEEEEEEccCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeEEEEEeccCc
Q psy8006          10 SIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLLELLTS   89 (126)
Q Consensus        10 ~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~~lv~e~~~~   89 (126)
                      .+.||+|+||.||+|.+..++..+|+|.+............+.+|+.++..+.+||||+++++.+...+..++||||+++
T Consensus        34 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~iv~~~~~~~~~~~~~lv~e~~~~  113 (327)
T 3lm5_A           34 SKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVINLHEVYENTSEIILILEYAAG  113 (327)
T ss_dssp             EEEEEEETTEEEEEEEETTTCCEEEEEEEESEETTEECHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEEECCTT
T ss_pred             cceeCCCCCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHhccCCCCEEEEEEEEEeCCeEEEEEEecCC
Confidence            48899999999999999999999999999876655555667999999999997779999999999999999999999999


Q ss_pred             ccHHHHHHh--cCCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          90 AVDSKIRES--FGSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        90 ~~L~~~~~~--~~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      ++|.+++..  ...+++..+..++.|++.|++|||+.++
T Consensus       114 ~~L~~~~~~~~~~~~~~~~~~~i~~ql~~~L~~LH~~gi  152 (327)
T 3lm5_A          114 GEIFSLCLPELAEMVSENDVIRLIKQILEGVYYLHQNNI  152 (327)
T ss_dssp             EEGGGGGSSCC-CCCCHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred             CcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence            999888854  3579999999999999999999998763

>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*

Probab=99.89  E-value=3.8e-23  Score=139.73  Aligned_cols=122  Identities=18%  Similarity=0.172  Sum_probs=99.9

Q ss_pred             cccccceeeccCccceeEEEEEEccCCcEEEEEEeecCCC-CchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeEEE
Q psy8006           4 IKNIISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRR-STDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMIL   82 (126)
Q Consensus         4 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~-~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~~l   82 (126)
                      +++|...+.||+|+||.||++.+..++..||+|.+..... .......+.+|+.++..++| |||+++++.+...+..++
T Consensus       147 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h-~~iv~l~~~~~~~~~~~l  225 (446)
T 4ejn_A          147 MNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRH-PFLTALKYSFQTHDRLCF  225 (446)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHC-------------CCCCCSC-TTSCCEEEEEEETTEEEE
T ss_pred             hHHcEEeEEEeeCcCEEEEEEEEcCCCCEEEEEEEEhhhhhhhHHHHHHHHHHHHHHhCCC-CeEeeEEEEEeeCCEEEE
Confidence            4568888999999999999999999999999999986532 22223457889999999998 999999999999999999


Q ss_pred             EEeccCcccHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhhc-cCC
Q psy8006          83 LLELLTSAVDSKIRESFGSKSESGVQNCLEPSISVFSSLSK-FET  126 (126)
Q Consensus        83 v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~l~~-~~~  126 (126)
                      ||||+++++|.+++.....+++..+..++.|++.||+|||+ .++
T Consensus       226 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~gi  270 (446)
T 4ejn_A          226 VMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEKNV  270 (446)
T ss_dssp             EECCCSSCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHHTCC
T ss_pred             EEeeCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhcCCE
Confidence            99999999999999887889999999999999999999997 653

>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}

Probab=99.89  E-value=1.9e-22  Score=128.56  Aligned_cols=123  Identities=20%  Similarity=0.239  Sum_probs=107.9

Q ss_pred             ccccccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCC-chhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeEE
Q psy8006           3 NIKNIISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRS-TDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMI   81 (126)
Q Consensus         3 ~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~-~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~~   81 (126)
                      .+.+|...+.||+|+||.||++.+..++..+|+|.+...... ......+.+|+.++..++| ||++++++.+...+..+
T Consensus         9 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h-~~i~~~~~~~~~~~~~~   87 (278)
T 3cok_A            9 KIEDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKH-PSILELYNYFEDSNYVY   87 (278)
T ss_dssp             SGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTBCC-TTBCCEEEEEECSSEEE
T ss_pred             ccccceeeeeecCCCceEEEEEEEccCCceEEEEEeehhhhhhhhHHHHHHHHHHHHHhCCC-CCeEeEEEEEccCCeEE
Confidence            456788899999999999999999999999999999764321 1223568899999999998 99999999999999999


Q ss_pred             EEEeccCcccHHHHHHhc-CCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          82 LLLELLTSAVDSKIRESF-GSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        82 lv~e~~~~~~L~~~~~~~-~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      ++|||+++++|.+++... ..+++..+..++.|++.|++|||+.++
T Consensus        88 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i  133 (278)
T 3cok_A           88 LVLEMCHNGEMNRYLKNRVKPFSENEARHFMHQIITGMLYLHSHGI  133 (278)
T ss_dssp             EEEECCTTEEHHHHHHTCSSCCCHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred             EEEecCCCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence            999999999999988764 579999999999999999999998763

>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*

Probab=99.89  E-value=1.3e-22  Score=131.84  Aligned_cols=123  Identities=15%  Similarity=0.159  Sum_probs=90.6

Q ss_pred             CcccccccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeE
Q psy8006           1 MNNIKNIISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDM   80 (126)
Q Consensus         1 ~~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~   80 (126)
                      |....+|...+.||+|+||.||+|.+..++..+|+|.+..... ......+.+|+.++..++| |||+++++.+..++..
T Consensus         1 ms~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~E~~~l~~l~h-p~iv~~~~~~~~~~~~   78 (317)
T 2pmi_A            1 MSSSSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSE-EGTPSTAIREISLMKELKH-ENIVRLYDVIHTENKL   78 (317)
T ss_dssp             ------------------CEEEEEECSSSCCEEEEEEEECCST-TCSCHHHHHHHHHHTTCCB-TTBCCEEEEECCTTEE
T ss_pred             CCcccceeEeeEECCCCCEEEEEEEECCCCcEEEEEEeecccc-cccHHHHHHHHHHHHhcCC-CCcceEEEEEEECCeE
Confidence            5567789999999999999999999999999999999986542 2223468899999999998 9999999999999999


Q ss_pred             EEEEeccCcccHHHHHHhc------CCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          81 ILLLELLTSAVDSKIRESF------GSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        81 ~lv~e~~~~~~L~~~~~~~------~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      ++||||+++ +|.+++...      ..+++..+..++.|++.|+.|||+.++
T Consensus        79 ~lv~e~~~~-~L~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~i  129 (317)
T 2pmi_A           79 TLVFEFMDN-DLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHENKI  129 (317)
T ss_dssp             EEEEECCCC-BHHHHHHHHHSSSCCCCCCHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred             EEEEEecCC-CHHHHHHhccccccccCCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence            999999996 588877643      358999999999999999999998763

>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*

Probab=99.89  E-value=1e-22  Score=141.10  Aligned_cols=122  Identities=21%  Similarity=0.225  Sum_probs=106.2

Q ss_pred             cccccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCC-chhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeEEE
Q psy8006           4 IKNIISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRS-TDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMIL   82 (126)
Q Consensus         4 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~-~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~~l   82 (126)
                      .++|...+.||+|+||.||.+.+..++..+|+|.+...... ......+.+|+.++..++| |||+++++.+...+..|+
T Consensus       183 ~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAvK~l~k~~~~~~~~~~~~~~E~~iL~~l~h-p~Iv~l~~~~~~~~~l~l  261 (576)
T 2acx_A          183 KNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNS-RFVVSLAYAYETKDALCL  261 (576)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCC-TTBCCEEEEEECSSEEEE
T ss_pred             ccceEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhHhhhhhHHHHHHHHHHHHHHHcCC-CCEeeEEEEEeeCCEEEE
Confidence            35677889999999999999999999999999999865331 1223458899999999998 999999999999999999


Q ss_pred             EEeccCcccHHHHHHhcC--CCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          83 LLELLTSAVDSKIRESFG--SKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        83 v~e~~~~~~L~~~~~~~~--~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      ||||+++++|.+++....  .+++..++.++.|++.|++|||+.++
T Consensus       262 VmEy~~gg~L~~~l~~~~~~~l~e~~~~~i~~qIl~aL~yLH~~gI  307 (576)
T 2acx_A          262 VLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHRERI  307 (576)
T ss_dssp             EECCCCSCBHHHHHHSSSSCCCCHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred             EEEcCCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCE
Confidence            999999999998887643  49999999999999999999998763

>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*

Probab=99.89  E-value=2.4e-22  Score=128.10  Aligned_cols=122  Identities=12%  Similarity=0.103  Sum_probs=107.2

Q ss_pred             ccccccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEe--CCeE
Q psy8006           3 NIKNIISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFES--SHDM   80 (126)
Q Consensus         3 ~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~--~~~~   80 (126)
                      ..++|...+.||+|+||.||++.+..++..+|+|.+............+.+|+.++..++| |||+++++.+..  ....
T Consensus         4 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h-~~i~~~~~~~~~~~~~~~   82 (279)
T 2w5a_A            4 RAEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKH-PNIVRYYDRIIDRTNTTL   82 (279)
T ss_dssp             CGGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCC-TTBCCEEEEEEEGGGTEE
T ss_pred             chhheeeehhccCCCCcEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhcCC-CCCCeEEEEEecCCCceE
Confidence            4678888999999999999999999999999999998776555555679999999999998 999999998753  5689


Q ss_pred             EEEEeccCcccHHHHHHhc----CCCCHHHHHHHHHHHHHHHHhhhccC
Q psy8006          81 ILLLELLTSAVDSKIRESF----GSKSESGVQNCLEPSISVFSSLSKFE  125 (126)
Q Consensus        81 ~lv~e~~~~~~L~~~~~~~----~~~~~~~~~~~~~qi~~~l~~l~~~~  125 (126)
                      ++||||+++++|.+++...    ..+++..+..++.|++.|++|||+.+
T Consensus        83 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~  131 (279)
T 2w5a_A           83 YIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRS  131 (279)
T ss_dssp             EEEEECCTTEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHC
T ss_pred             EEEEeCCCCCCHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHhccc
Confidence            9999999999999888642    34999999999999999999999865

>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*

Probab=99.89  E-value=6.9e-22  Score=131.72  Aligned_cols=119  Identities=11%  Similarity=0.064  Sum_probs=105.1

Q ss_pred             cccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcC-CCCceeeeeeeEeCCeEEEEE
Q psy8006           6 NIISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRC-NSRIVQLHQVFESSHDMILLL   84 (126)
Q Consensus         6 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~-~~~iv~l~~~~~~~~~~~lv~   84 (126)
                      .|...+.||+|+||.||++.+.. +..+|+|.+............+.+|+.++..+++ ||||+++++++...+..|+||
T Consensus        57 ~y~~~~~LG~G~fg~Vy~~~~~~-~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~  135 (390)
T 2zmd_A           57 IYSILKQIGSGGSSKVFQVLNEK-KQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVM  135 (390)
T ss_dssp             EEEEEEEEECCSSEEEEEEECTT-CCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEE
T ss_pred             ceEEEEEEccCCCeEEEEEEcCC-CCEEEEEEEecccccHHHHHHHHHHHHHHHHcccCCCeEEEEEEEEecCCEEEEEE
Confidence            47778999999999999998865 8899999998766555555679999999999975 699999999999999999999


Q ss_pred             eccCcccHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          85 ELLTSAVDSKIRESFGSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        85 e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      | +.+++|.+++.....+++..+..++.|++.||.|||+.++
T Consensus       136 E-~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~lH~~~i  176 (390)
T 2zmd_A          136 E-CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGI  176 (390)
T ss_dssp             E-CCSEEHHHHHHHCSSCCHHHHHHHHHHHHHHHHHHHTTTC
T ss_pred             e-cCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence            9 6677799999887889999999999999999999999864

>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}

Probab=99.89  E-value=2.6e-22  Score=133.11  Aligned_cols=117  Identities=18%  Similarity=0.285  Sum_probs=97.4

Q ss_pred             ccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeEEEEEec
Q psy8006           7 IISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLLEL   86 (126)
Q Consensus         7 ~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~~lv~e~   86 (126)
                      +...+.||+|+||.||+|.+..++..+|+|.+.....  .....+.+|+.++..++| |||+++++++...+..++||||
T Consensus        91 ~~~~~~lG~G~~g~Vy~a~~~~~g~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h-pnIv~~~~~~~~~~~~~lv~E~  167 (373)
T 2x4f_A           91 VSKTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGM--KDKEEVKNEISVMNQLDH-ANLIQLYDAFESKNDIVLVMEY  167 (373)
T ss_dssp             EEEEEECC-----CEEEEEETTTCCEEEEEEEECCSH--HHHHHHHHHHHHHTTCCC-TTBCCEEEEEECSSEEEEEEEC
T ss_pred             eecceEEecCcCEEEEEEEEcCCCcEEEEEEEccccc--ccHHHHHHHHHHHHhCCC-CCCCeEEEEEEECCEEEEEEeC
Confidence            3446789999999999999999999999999986532  234568999999999998 9999999999999999999999


Q ss_pred             cCcccHHHHHHh-cCCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          87 LTSAVDSKIRES-FGSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        87 ~~~~~L~~~~~~-~~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      +++++|.+++.. ...+++..+..++.|++.|++|||+.++
T Consensus       168 ~~~~~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~i  208 (373)
T 2x4f_A          168 VDGGELFDRIIDESYNLTELDTILFMKQICEGIRHMHQMYI  208 (373)
T ss_dssp             CTTCEEHHHHHHTGGGCCHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred             CCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCc
Confidence            999999887754 3469999999999999999999998763

>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*

Probab=99.89  E-value=7e-23  Score=135.89  Aligned_cols=121  Identities=18%  Similarity=0.175  Sum_probs=105.3

Q ss_pred             cccccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeEEEE
Q psy8006           4 IKNIISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILL   83 (126)
Q Consensus         4 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~~lv   83 (126)
                      .++|...+.||+|+||.||+|.+..++..||+|.+.... .......+.+|+.++..++| |||+++++.+...+..++|
T Consensus       113 ~~~~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~h-pniv~~~~~~~~~~~~~lv  190 (377)
T 3cbl_A          113 HEDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETL-PPDLKAKFLQEARILKQYSH-PNIVRLIGVCTQKQPIYIV  190 (377)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEECCTTS-CHHHHTTTTHHHHHHTTCCC-TTBCCEEEEECSSSSCEEE
T ss_pred             hHHeEEeeEeccCCCCeEEEEEEecCCeEEEEEEccccC-CHHHHHHHHHHHHHHHhCCC-CCEEEEEEEEecCCCcEEE
Confidence            356777899999999999999999899999999987543 22333458899999999998 9999999999988899999


Q ss_pred             EeccCcccHHHHHHhc-CCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          84 LELLTSAVDSKIRESF-GSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        84 ~e~~~~~~L~~~~~~~-~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      |||+++++|.+++... ..+++..+..++.|++.|++|||+.++
T Consensus       191 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~i  234 (377)
T 3cbl_A          191 MELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLESKCC  234 (377)
T ss_dssp             EECCTTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred             EEcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCc
Confidence            9999999999988754 469999999999999999999998763

>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*

Probab=99.89  E-value=3.6e-22  Score=131.30  Aligned_cols=122  Identities=11%  Similarity=0.043  Sum_probs=102.5

Q ss_pred             cccccceeeccCccceeEEEEE-----EccCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCC
Q psy8006           4 IKNIISSIINDMGKYATVRRCR-----DRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSH   78 (126)
Q Consensus         4 ~~~~~~~~~lg~g~~~~v~~~~-----~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~   78 (126)
                      .++|...+.||+|+||.||+|.     +..++..+|+|.+..... ......+.+|+.++..+.+||||+++++++..++
T Consensus        21 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~   99 (359)
T 3vhe_A           21 RDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGAT-HSEHRALMSELKILIHIGHHLNVVNLLGACTKPG   99 (359)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCC-HHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTT
T ss_pred             ccceeeceeecCCCCceEEEEEeccccccccceEEEEEEecCcCC-HHHHHHHHHHHHHHHhhcCCcceeeeeeeeecCC
Confidence            4567889999999999999998     556678999999976532 2334568999999999965599999999987655


Q ss_pred             -eEEEEEeccCcccHHHHHHhcCC--------------------------------------------------------
Q psy8006          79 -DMILLLELLTSAVDSKIRESFGS--------------------------------------------------------  101 (126)
Q Consensus        79 -~~~lv~e~~~~~~L~~~~~~~~~--------------------------------------------------------  101 (126)
                       ..++||||+++++|.+++.....                                                        
T Consensus       100 ~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  179 (359)
T 3vhe_A          100 GPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSASSGFVEEKSLSDVEEE  179 (359)
T ss_dssp             SCCEEEEECCTTEEHHHHHHTTTTSBCSCC--------------------------------------------------
T ss_pred             CceEEEEEecCCCcHHHHHHhccccccccccccchhhcccccccccchhhhccccccCccccccccccccccccchhhhc
Confidence             58999999999999999875432                                                        


Q ss_pred             ----------CCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006         102 ----------KSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus       102 ----------~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                                +++..+..++.|++.|+.|||+.++
T Consensus       180 ~~~~~~~~~~l~~~~~~~~~~ql~~aL~~LH~~~i  214 (359)
T 3vhe_A          180 EAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKC  214 (359)
T ss_dssp             ----CTTTTCBCHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred             ccccchhccccCHHHHHHHHHHHHHHHHHHHHCCc
Confidence                      8999999999999999999998764

>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}

Probab=99.89  E-value=3.4e-22  Score=130.27  Aligned_cols=120  Identities=17%  Similarity=0.152  Sum_probs=103.6

Q ss_pred             ccccceeeccCccceeEEEEEEccCCc---EEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeEE
Q psy8006           5 KNIISSIINDMGKYATVRRCRDRKNGT---QYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMI   81 (126)
Q Consensus         5 ~~~~~~~~lg~g~~~~v~~~~~~~~~~---~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~~   81 (126)
                      ..|...+.||+|+||.||.|.+..++.   .+|+|.+.... .......+.+|+.++..++| |||+++++++...+..+
T Consensus        49 ~~y~i~~~lG~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~h-~~iv~~~~~~~~~~~~~  126 (325)
T 3kul_A           49 SRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGY-TERQRRDFLSEASIMGQFDH-PNIIRLEGVVTRGRLAM  126 (325)
T ss_dssp             GGEEEEEEEEETTTEEEEEEEECCTTSCCEEEEEEEECTTC-CHHHHHHHHHHHHHHTTCCC-TTBCCEEEEECGGGCCE
T ss_pred             hHeEEeeEEEeCCCcEEEEEEEecCCCCCceEEEEecCCCC-CHHHHHHHHHHHHHHHhCCC-CCCCcEEEEEEeCCccE
Confidence            456678899999999999999976554   59999997643 23334569999999999998 99999999999888999


Q ss_pred             EEEeccCcccHHHHHHhc-CCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          82 LLLELLTSAVDSKIRESF-GSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        82 lv~e~~~~~~L~~~~~~~-~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      +||||+++++|.+++... ..+++..+..++.|++.|++|||+.++
T Consensus       127 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~i  172 (325)
T 3kul_A          127 IVTEYMENGSLDTFLRTHDGQFTIMQLVGMLRGVGAGMRYLSDLGY  172 (325)
T ss_dssp             EEEECCTTCBHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred             EEeeCCCCCcHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence            999999999999998654 579999999999999999999998763

>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*

Probab=99.89  E-value=4.3e-22  Score=130.78  Aligned_cols=122  Identities=12%  Similarity=0.201  Sum_probs=103.4

Q ss_pred             ccccccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEe------
Q psy8006           3 NIKNIISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFES------   76 (126)
Q Consensus         3 ~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~------   76 (126)
                      .+.+|...+.||+|+||.||+|.+..++..+|+|.+............+.+|+.++..++| |||+++++.+..      
T Consensus        15 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h-~~iv~~~~~~~~~~~~~~   93 (351)
T 3mi9_A           15 EVSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKH-ENVVNLIEICRTKASPYN   93 (351)
T ss_dssp             BGGGEEEEEECSSCSTTSEEEEEETTTCCEEEEEECCCSSCSSSSCHHHHHHHHHHHHCCC-TTBCCEEEEEEEC-----
T ss_pred             cccceeEEEEEecCCCcEEEEEEECCCCCEEEEEEEecccccccchHHHHHHHHHHHhccC-CCcccHhheeeccccccc
Confidence            4677888999999999999999999999999999997765544444568899999999998 999999999876      


Q ss_pred             --CCeEEEEEeccCcccHHHHHH-hcCCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          77 --SHDMILLLELLTSAVDSKIRE-SFGSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        77 --~~~~~lv~e~~~~~~L~~~~~-~~~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                        .+..++||||++++ +...+. ....+++..+..++.|++.|++|||+.++
T Consensus        94 ~~~~~~~lv~e~~~~~-l~~~l~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~i  145 (351)
T 3mi9_A           94 RCKGSIYLVFDFCEHD-LAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIHRNKI  145 (351)
T ss_dssp             ---CEEEEEEECCSEE-HHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred             cCCceEEEEEeccCCC-HHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence              34689999999986 555554 44679999999999999999999998763

>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*

Probab=99.89  E-value=3.6e-22  Score=127.88  Aligned_cols=120  Identities=12%  Similarity=0.078  Sum_probs=104.7

Q ss_pred             cccccceeeccCccceeEEEEEEccCC-------cEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEe
Q psy8006           4 IKNIISSIINDMGKYATVRRCRDRKNG-------TQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFES   76 (126)
Q Consensus         4 ~~~~~~~~~lg~g~~~~v~~~~~~~~~-------~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~   76 (126)
                      .++|...+.||+|+||.||+|.+..++       ..+|+|.+....  ......+.+|+.++..++| |||+++++.+..
T Consensus         7 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~~--~~~~~~~~~E~~~l~~l~h-~~iv~~~~~~~~   83 (289)
T 4fvq_A            7 NEDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAH--RNYSESFFEAASMMSKLSH-KHLVLNYGVCVC   83 (289)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECGGG--GGGHHHHHHHHHHHHTSCC-TTBCCEEEEECC
T ss_pred             hhHeeeeeeeccCCCceEEEEEEecccccccccchhhhhhhccccc--HHHHHHHHHHHHHHHhCCC-CCEeEEEEEEEe
Confidence            356888899999999999999988776       469999987543  2334568999999999998 999999999999


Q ss_pred             CCeEEEEEeccCcccHHHHHHhcC-CCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          77 SHDMILLLELLTSAVDSKIRESFG-SKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        77 ~~~~~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      ++..++||||+++++|.+++.... .+++..+..++.|++.|+.|||+.++
T Consensus        84 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~i  134 (289)
T 4fvq_A           84 GDENILVQEFVKFGSLDTYLKKNKNCINILWKLEVAKQLAAAMHFLEENTL  134 (289)
T ss_dssp             TTCCEEEEECCTTCBHHHHHHHTGGGCCHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred             CCCCEEEEECCCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHhhCCe
Confidence            999999999999999999987654 49999999999999999999998764

>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A

Probab=99.89  E-value=2.9e-22  Score=128.50  Aligned_cols=120  Identities=17%  Similarity=0.262  Sum_probs=103.9

Q ss_pred             cccccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeEEEE
Q psy8006           4 IKNIISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILL   83 (126)
Q Consensus         4 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~~lv   83 (126)
                      +++|...+.||+|+||.||+|.+ .++..+|+|.+............+.+|+.++..++| |||+++++.+..++..++|
T Consensus         1 ~~~y~~~~~lg~G~~g~V~~~~~-~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h-~~iv~~~~~~~~~~~~~lv   78 (288)
T 1ob3_A            1 MEKYHGLEKIGEGTYGVVYKAQN-NYGETFALKKIRLEKEDEGIPSTTIREISILKELKH-SNIVKLYDVIHTKKRLVLV   78 (288)
T ss_dssp             CCSEEEEEEEEEETTEEEEEEEE-TTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCC-TTBCCEEEEEECSSCEEEE
T ss_pred             CccchhhhhcccCCCEEEEEEEc-CCCCEEEEEEEeccccccccchhHHHHHHHHHhcCC-CCEeeeeeEEccCCeEEEE
Confidence            35688889999999999999998 678999999997665433334568899999999998 9999999999999999999


Q ss_pred             EeccCcccHHHHHHh-cCCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          84 LELLTSAVDSKIRES-FGSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        84 ~e~~~~~~L~~~~~~-~~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      ||++++ +|.+++.. ...+++..+..++.|++.|++|||+.++
T Consensus        79 ~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i  121 (288)
T 1ob3_A           79 FEHLDQ-DLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRRV  121 (288)
T ss_dssp             EECCSE-EHHHHHHTSTTCCCHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred             EEecCC-CHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence            999997 58777765 3679999999999999999999998764

>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}

Probab=99.89  E-value=1.4e-21  Score=128.06  Aligned_cols=120  Identities=10%  Similarity=0.065  Sum_probs=105.3

Q ss_pred             ccccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCC-CCceeeeeeeEeCCeEEEE
Q psy8006           5 KNIISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCN-SRIVQLHQVFESSHDMILL   83 (126)
Q Consensus         5 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~-~~iv~l~~~~~~~~~~~lv   83 (126)
                      +.|...+.||+|+||.||++.+. ++..+|+|.+............+.+|+.++..++|+ |||+++++++..+...++|
T Consensus         9 ~~y~i~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~lv   87 (343)
T 3dbq_A            9 RIYSILKQIGSGGSSKVFQVLNE-KKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMV   87 (343)
T ss_dssp             CEEEEEEEESCCSSEEEEEEECT-TSCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEE
T ss_pred             CEEEEEEEEecCCCeEEEEEEeC-CCCEEEEEEeeccccchHHHHHHHHHHHHHHhhhhcCCceEEEeeeEeeCCEEEEE
Confidence            45778899999999999999884 588999999987665555456789999999999864 8999999999999999999


Q ss_pred             EeccCcccHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          84 LELLTSAVDSKIRESFGSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        84 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      || +.+++|.+++.....+++..+..++.|++.|+.|||+.++
T Consensus        88 ~e-~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~al~~lH~~~i  129 (343)
T 3dbq_A           88 ME-CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGI  129 (343)
T ss_dssp             EC-CCSEEHHHHHHHSCCCCHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred             Ee-CCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCe
Confidence            99 5667799999888889999999999999999999998764

>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...

Probab=99.89  E-value=3.1e-22  Score=127.38  Aligned_cols=121  Identities=16%  Similarity=0.098  Sum_probs=107.4

Q ss_pred             cccccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeEEEE
Q psy8006           4 IKNIISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILL   83 (126)
Q Consensus         4 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~~lv   83 (126)
                      +.+|...+.||+|+||.||.|.+..++..+|+|.+...... .....+.+|+.++..++| ||++++++.+..++..++|
T Consensus         6 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~e~~~l~~l~h-~~i~~~~~~~~~~~~~~lv   83 (276)
T 2yex_A            6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAV-DCPENIKKEICINKMLNH-ENVVKFYGHRREGNIQYLF   83 (276)
T ss_dssp             HHHEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGCT-THHHHHHHHHHHHHTCCC-TTBCCEEEEEEETTEEEEE
T ss_pred             ecceEEEEEeecCCCcEEEEEEECCCCcEEEEEEeeeccch-hhhHHHHHHHHHHHhcCC-CCceeeeeEEEcCCEEEEE
Confidence            35677889999999999999999999999999999865432 234568899999999998 9999999999999999999


Q ss_pred             EeccCcccHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          84 LELLTSAVDSKIRESFGSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        84 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      ||++++++|.+++.....+++..+..++.|++.|++|||+.++
T Consensus        84 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i  126 (276)
T 2yex_A           84 LEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGI  126 (276)
T ss_dssp             EECCTTEEGGGGSBTTTBCCHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred             EEecCCCcHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHhCCe
Confidence            9999999999988877789999999999999999999998763

>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...

Probab=99.89  E-value=2.5e-22  Score=133.19  Aligned_cols=120  Identities=17%  Similarity=0.190  Sum_probs=103.5

Q ss_pred             ccccceeeccCccceeEEEEEEc---cCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeEE
Q psy8006           5 KNIISSIINDMGKYATVRRCRDR---KNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMI   81 (126)
Q Consensus         5 ~~~~~~~~lg~g~~~~v~~~~~~---~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~~   81 (126)
                      .+|...+.||+|+||.||+|.+.   .++..+|+|.+.... .......+.+|+.++.+++| |||+++++++..++..+
T Consensus        45 ~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~E~~~l~~l~h-~niv~~~~~~~~~~~~~  122 (373)
T 2qol_A           45 TNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGY-TEKQRRDFLGEASIMGQFDH-PNIIRLEGVVTKSKPVM  122 (373)
T ss_dssp             GGCCCCEEEEECSSSEEEEC-CBCTTSCBCCEEEEECCTTC-CHHHHHHHHHHHHHHTTCCC-TTBCCEEEEECSSSSCE
T ss_pred             hhceeeeEEeeCCCeEEEEEEEecCCCCceeEEEEEecCcc-CHHHHHHHHHHHHHHHhCCC-CCCCeEEEEEeeCCceE
Confidence            46777899999999999999876   456789999997653 23334569999999999998 99999999999889999


Q ss_pred             EEEeccCcccHHHHHHhc-CCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          82 LLLELLTSAVDSKIRESF-GSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        82 lv~e~~~~~~L~~~~~~~-~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      +||||+++++|.+++... ..+++..+..++.|++.|++|||+.++
T Consensus       123 lv~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~i  168 (373)
T 2qol_A          123 IVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGY  168 (373)
T ss_dssp             EEEECCTTCBHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred             EEEeCCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence            999999999999998764 479999999999999999999998764

>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B

Probab=99.89  E-value=3.5e-22  Score=137.80  Aligned_cols=122  Identities=19%  Similarity=0.185  Sum_probs=106.2

Q ss_pred             cccccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCc-hhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeEEE
Q psy8006           4 IKNIISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRST-DLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMIL   82 (126)
Q Consensus         4 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~-~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~~l   82 (126)
                      .++|...++||+|+||.||+|.+..++..+|+|++....... .....+.+|..++..++| |||+++++.+......|+
T Consensus       184 ~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~l~k~~~~~~~~~~~~~~E~~iL~~l~h-p~Iv~l~~~~~~~~~l~l  262 (543)
T 3c4z_A          184 EDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHS-RFIVSLAYAFETKTDLCL  262 (543)
T ss_dssp             GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCC-TTBCCEEEEEECSSEEEE
T ss_pred             hhheEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEEhHHhhhhHHHHHHHHHHHHHHhcCC-CCEeeEEEEEeeCCEEEE
Confidence            356777889999999999999999999999999998654321 223468899999999998 999999999999999999


Q ss_pred             EEeccCcccHHHHHHhc----CCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          83 LLELLTSAVDSKIRESF----GSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        83 v~e~~~~~~L~~~~~~~----~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      ||||+++++|.+++...    ..+++..++.++.|++.|++|||+.++
T Consensus       263 VmE~~~gg~L~~~l~~~~~~~~~l~e~~~~~~~~qi~~aL~~LH~~gI  310 (543)
T 3c4z_A          263 VMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRNI  310 (543)
T ss_dssp             EECCCTTCBHHHHHHTSSTTSCSCCHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred             EEEeccCCCHHHHHHHhhcccccccHHHHHHHHHHHHHHHHHHHHcCC
Confidence            99999999998888653    369999999999999999999998764

>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...

Probab=99.89  E-value=6.4e-22  Score=130.33  Aligned_cols=119  Identities=16%  Similarity=0.200  Sum_probs=107.3

Q ss_pred             cccccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeEEEE
Q psy8006           4 IKNIISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILL   83 (126)
Q Consensus         4 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~~lv   83 (126)
                      ..+|...+.||+|+||.||++.+..++..+|+|.+.... .......+.+|+.++..++| |||+++++.+..++..++|
T Consensus        32 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~va~K~~~~~~-~~~~~~~~~~E~~~l~~l~h-~~iv~~~~~~~~~~~~~lv  109 (360)
T 3eqc_A           32 DDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEI-KPAIRNQIIRELQVLHECNS-PYIVGFYGAFYSDGEISIC  109 (360)
T ss_dssp             GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEECCC-CHHHHHHHHHHHGGGGGCCC-TTBCCEEEEEEETTEEEEE
T ss_pred             cccceeeeeecCCCCeEEEEEEECCCCcEEEEEEecccc-CHHHHHHHHHHHHHHHHCCC-CCEEEEeEEEEECCEEEEE
Confidence            356788899999999999999999999999999998653 23334568999999999998 9999999999999999999


Q ss_pred             EeccCcccHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhhcc
Q psy8006          84 LELLTSAVDSKIRESFGSKSESGVQNCLEPSISVFSSLSKF  124 (126)
Q Consensus        84 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~l~~~  124 (126)
                      |||+++++|.+++.....+++..+..++.|++.|+.|||..
T Consensus       110 ~e~~~~~~L~~~l~~~~~~~~~~~~~i~~~i~~~l~~lh~~  150 (360)
T 3eqc_A          110 MEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREK  150 (360)
T ss_dssp             ECCCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             EECCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHh
Confidence            99999999999998878899999999999999999999974

>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A

Probab=99.89  E-value=1.2e-22  Score=143.11  Aligned_cols=123  Identities=15%  Similarity=0.113  Sum_probs=107.7

Q ss_pred             cccccceeeccCccceeEEEEEEccCCcEEEEEEeecCCC-CchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeEEE
Q psy8006           4 IKNIISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRR-STDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMIL   82 (126)
Q Consensus         4 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~-~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~~l   82 (126)
                      +.+|...+.||+|+||.||++.+..++..||+|++..... ..........|..++..+.+||+|+.+++.+...+.+|+
T Consensus       340 ~~~f~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~l~~~~~~~~~~~l  419 (674)
T 3pfq_A          340 LTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYF  419 (674)
T ss_dssp             CTTEEEEEESSBTTTBCEEEEEESSSCCEEEEEEEEHHHHHHTTTTHHHHHHHHHHTCTTCCTTBCCEEEECBCSSEEEE
T ss_pred             ccceEEEEEEccCCCEEEEEEEECCCCcEEEEEEEeccccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEEEeCCEEEE
Confidence            4567788999999999999999999999999999986432 122234578899999988666999999999999999999


Q ss_pred             EEeccCcccHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          83 LLELLTSAVDSKIRESFGSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        83 v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      ||||+++++|.+++...+.+++..++.++.|++.||+|||+.++
T Consensus       420 V~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~gI  463 (674)
T 3pfq_A          420 VMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQSKGI  463 (674)
T ss_dssp             EEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTSE
T ss_pred             EEeCcCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCe
Confidence            99999999999999887889999999999999999999998764

>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}

Probab=99.89  E-value=3.8e-22  Score=133.11  Aligned_cols=120  Identities=21%  Similarity=0.182  Sum_probs=103.8

Q ss_pred             ccccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCC--eEEE
Q psy8006           5 KNIISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSH--DMIL   82 (126)
Q Consensus         5 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~--~~~l   82 (126)
                      ..|...+.||+|+||.||+|.+..++..+|+|.+...... .....+.+|+.++..++| |||+++++++...+  ..++
T Consensus         9 ~~y~i~~~LG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~E~~~l~~l~h-pnIv~~~~~~~~~~~~~~~l   86 (396)
T 4eut_A            9 HLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFL-RPVDVQMREFEVLKKLNH-KNIVKLFAIEEETTTRHKVL   86 (396)
T ss_dssp             EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGG-SCHHHHHHHHHHHHHCCC-TTBCCEEEEEECTTTCCEEE
T ss_pred             CceEEEEEEEcCCCeEEEEEEECCCCcEEEEEEecccccc-chHHHHHHHHHHHHhcCC-CCCCeEEEeeccCCCCeeEE
Confidence            4688899999999999999999999999999999864432 224467899999999998 99999999987655  7899


Q ss_pred             EEeccCcccHHHHHHhcC---CCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          83 LLELLTSAVDSKIRESFG---SKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        83 v~e~~~~~~L~~~~~~~~---~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      ||||+++++|.+++....   .+++..+..++.|++.|++|||+.++
T Consensus        87 v~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~i  133 (396)
T 4eut_A           87 IMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENGI  133 (396)
T ss_dssp             EECCCTTEEHHHHTTSGGGTTCCCHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred             EEecCCCCCHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHHCCE
Confidence            999999999999987533   39999999999999999999998763

>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*

Probab=99.89  E-value=6.5e-22  Score=126.96  Aligned_cols=120  Identities=17%  Similarity=0.174  Sum_probs=100.2

Q ss_pred             cccccee-eccCccceeEEEEE--EccCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeEE
Q psy8006           5 KNIISSI-INDMGKYATVRRCR--DRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMI   81 (126)
Q Consensus         5 ~~~~~~~-~lg~g~~~~v~~~~--~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~~   81 (126)
                      ..|...+ .||+|+||.||+|.  +..++..+|+|.+............+.+|+.++..++| |||+++++.+ ..+..+
T Consensus        16 ~~y~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h-~~i~~~~~~~-~~~~~~   93 (291)
T 1xbb_A           16 KLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDN-PYIVRMIGIC-EAESWM   93 (291)
T ss_dssp             GGEEEEEEEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCC-TTBCCEEEEE-ESSSEE
T ss_pred             hhhhhccCccccccCeeeEeeeecCCCceeeEEEEeecccccCHHHHHHHHHHHHHHHhCCC-CCEEEEEEEE-CCCCcE
Confidence            3455555 99999999999995  45667889999998765444445679999999999998 9999999998 566789


Q ss_pred             EEEeccCcccHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          82 LLLELLTSAVDSKIRESFGSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        82 lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      +|||++++++|.+++.....+++..+..++.|++.|++|||+.++
T Consensus        94 lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~LH~~~i  138 (291)
T 1xbb_A           94 LVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNF  138 (291)
T ss_dssp             EEEECCTTEEHHHHHHHCTTCCHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred             EEEEeCCCCCHHHHHHhCcCCCHHHHHHHHHHHHHHHHHHHhCCe
Confidence            999999999999999887789999999999999999999998763

>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A

Probab=99.89  E-value=3.8e-22  Score=134.03  Aligned_cols=120  Identities=16%  Similarity=0.190  Sum_probs=102.3

Q ss_pred             ccccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCc------hhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCC
Q psy8006           5 KNIISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRST------DLKAEILHEVAVLEACRCNSRIVQLHQVFESSH   78 (126)
Q Consensus         5 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~------~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~   78 (126)
                      ++|...+.||+|+||.||+|.+..++..+|+|.+.......      .....+.+|+.++.+++| |||+++++++. .+
T Consensus       135 ~~y~~~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h-pniv~l~~~~~-~~  212 (419)
T 3i6u_A          135 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNH-PCIIKIKNFFD-AE  212 (419)
T ss_dssp             TTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGGTTC--------CCHHHHHHHHHHCCC-TTBCCCCEEEE-SS
T ss_pred             ccEEEEeEEeeCCCeEEEEEEECCCCcEEEEEEEEechhcccccccchhHHHHHHHHHHHHhCCC-CCEeeEEEEEe-cC
Confidence            35677889999999999999999999999999998754211      111237899999999998 99999999875 45


Q ss_pred             eEEEEEeccCcccHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          79 DMILLLELLTSAVDSKIRESFGSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        79 ~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      ..++||||+++++|.+++..+..+++..+..++.|++.|++|||+.++
T Consensus       213 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~LH~~~i  260 (419)
T 3i6u_A          213 DYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHENGI  260 (419)
T ss_dssp             EEEEEEECCTTCBGGGGTSSSCCCCHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred             ceEEEEEcCCCCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCc
Confidence            589999999999998888877889999999999999999999998764

>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ...

Probab=99.89  E-value=6.7e-22  Score=127.14  Aligned_cols=121  Identities=17%  Similarity=0.230  Sum_probs=102.0

Q ss_pred             cccccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeEEEE
Q psy8006           4 IKNIISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILL   83 (126)
Q Consensus         4 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~~lv   83 (126)
                      +++|...+.||+|+||.||.|.+..++..+|+|.+............+.+|+.++.+++| |||+++++.+..++..+++
T Consensus         2 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h-~~i~~~~~~~~~~~~~~lv   80 (299)
T 2r3i_A            2 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH-PNIVKLLDVIHTENKLYLV   80 (299)
T ss_dssp             CTTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEC--------CCHHHHHHHHHHTTCCC-TTBCCEEEEEEETTEEEEE
T ss_pred             cchhhhhhhhccCCCeeEEEEEEcCCCceEEEEEeecCccchhhHHHHHHHHHHHHHcCC-CCeeeEEEEEecCCceEEE
Confidence            578888999999999999999999999999999997654433334568899999999998 9999999999999999999


Q ss_pred             EeccCcccHHHHHHhc--CCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          84 LELLTSAVDSKIRESF--GSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        84 ~e~~~~~~L~~~~~~~--~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      ||++++ +|.+++...  ..+++..+..++.|++.|++|||+.++
T Consensus        81 ~e~~~~-~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i  124 (299)
T 2r3i_A           81 FEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRV  124 (299)
T ss_dssp             EECCSE-EHHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred             EEcccC-CHHHHHHhhhccCCCHHHHHHHHHHHHHHHHHHHHCCc
Confidence            999985 688888754  468999999999999999999998764

>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}

Probab=99.88  E-value=7.2e-22  Score=130.68  Aligned_cols=120  Identities=18%  Similarity=0.078  Sum_probs=101.1

Q ss_pred             ccccceeeccCccceeEEEEE-----EccCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCe
Q psy8006           5 KNIISSIINDMGKYATVRRCR-----DRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHD   79 (126)
Q Consensus         5 ~~~~~~~~lg~g~~~~v~~~~-----~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~   79 (126)
                      ++|...+.||+|+||.||+|.     +..++..+|+|.+..... ......+.+|+.++..++| |||+++++.+.....
T Consensus        71 ~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~h-pnIv~~~~~~~~~~~  148 (367)
T 3l9p_A           71 KNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCS-EQDELDFLMEALIISKFNH-QNIVRCIGVSLQSLP  148 (367)
T ss_dssp             GGEEEEEECCCCSSSCEEEEEECC-----CCEEEEEEECCSSCC-HHHHHHHHHHHHHHHHCCC-TTBCCEEEEECSSSS
T ss_pred             hHeEEeeEeeeCCCEEEEEEEEccCCCCCcceeEEEEecccccC-hhhHHHHHHHHHHHHhCCC-CCCCeEEEEEecCCC
Confidence            456778899999999999999     455677899999975432 3334468899999999998 999999999998889


Q ss_pred             EEEEEeccCcccHHHHHHhc-------CCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          80 MILLLELLTSAVDSKIRESF-------GSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        80 ~~lv~e~~~~~~L~~~~~~~-------~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      .++||||+++++|.+++...       ..+++..+..++.|++.|++|||+.++
T Consensus       149 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~i  202 (367)
T 3l9p_A          149 RFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHF  202 (367)
T ss_dssp             CEEEEECCTTEEHHHHHHHHSCCSSSCCCCCHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred             CEEEEEeCCCCCHHHHHHhhccccCccccccHHHHHHHHHHHHHHHHHHHhCCe
Confidence            99999999999999998753       258999999999999999999999764

>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=99.88  E-value=1.1e-21  Score=124.54  Aligned_cols=118  Identities=15%  Similarity=0.094  Sum_probs=103.5

Q ss_pred             cccccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeEEEE
Q psy8006           4 IKNIISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILL   83 (126)
Q Consensus         4 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~~lv   83 (126)
                      .++|...+.||+|+||.||++.+. ++..+|+|.+......   ...+.+|+.++.+++| |||+++++.+..++..++|
T Consensus         9 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~---~~~~~~E~~~l~~l~h-~~i~~~~~~~~~~~~~~lv   83 (269)
T 4hcu_A            9 PSELTFVQEIGSGQFGLVHLGYWL-NKDKVAIKTIREGAMS---EEDFIEEAEVMMKLSH-PKLVQLYGVCLEQAPICLV   83 (269)
T ss_dssp             GGGEEEEEEEEECSSCEEEEEEET-TTEEEEEEEECTTSBC---HHHHHHHHHHHHTCCC-TTBCCEEEEECSSSSEEEE
T ss_pred             hhhceeeheecCCCccEEEEEEec-CCCeEEEEEecccccC---HHHHHHHHHHHHhCCC-CCEeeEEEEEecCCceEEE
Confidence            356778899999999999999986 4677999999865433   3468999999999998 9999999999998999999


Q ss_pred             EeccCcccHHHHHHh-cCCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          84 LELLTSAVDSKIRES-FGSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        84 ~e~~~~~~L~~~~~~-~~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      |||+++++|.+++.. ...+++..+..++.|++.|++|||+.++
T Consensus        84 ~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i  127 (269)
T 4hcu_A           84 FEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACV  127 (269)
T ss_dssp             EECCTTCBHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred             EEeCCCCcHHHHHHhcCcccCHHHHHHHHHHHHHHHHHHHhCCe
Confidence            999999999998865 4569999999999999999999998764

>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7

Probab=99.88  E-value=2e-22  Score=132.77  Aligned_cols=123  Identities=23%  Similarity=0.242  Sum_probs=105.4

Q ss_pred             cccccceeeccCccceeEEEEEEc---cCCcEEEEEEeecCCCC--chhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCC
Q psy8006           4 IKNIISSIINDMGKYATVRRCRDR---KNGTQYAAKFLRKKRRS--TDLKAEILHEVAVLEACRCNSRIVQLHQVFESSH   78 (126)
Q Consensus         4 ~~~~~~~~~lg~g~~~~v~~~~~~---~~~~~~aiK~~~~~~~~--~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~   78 (126)
                      +.+|...+.||+|+||.||++.+.   .++..+|+|++......  ......+.+|+.++..+.+||||+++++.+...+
T Consensus        53 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~  132 (355)
T 1vzo_A           53 IENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTET  132 (355)
T ss_dssp             GGGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEETT
T ss_pred             ccceEEEEEeccCCCEEEEEEEEcccCCCCeEEEEEEEeHHHhhhhhhHHHHHHHHHHHHHHccCCCceeEEEEEEeeCc
Confidence            467888999999999999999984   57899999998764321  1122346789999999964599999999999999


Q ss_pred             eEEEEEeccCcccHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          79 DMILLLELLTSAVDSKIRESFGSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        79 ~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      ..++||||+++++|.+++.....+++..+..++.|++.||.|||+.++
T Consensus       133 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~i  180 (355)
T 1vzo_A          133 KLHLILDYINGGELFTHLSQRERFTEHEVQIYVGEIVLALEHLHKLGI  180 (355)
T ss_dssp             EEEEEECCCCSCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred             eEEEEeecCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCc
Confidence            999999999999999999887889999999999999999999998764

>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}

Probab=99.88  E-value=1.7e-22  Score=132.29  Aligned_cols=121  Identities=16%  Similarity=0.183  Sum_probs=105.9

Q ss_pred             ccccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCch------hHHHHHHHHHHHHHhcCCCCceeeeeeeEeCC
Q psy8006           5 KNIISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTD------LKAEILHEVAVLEACRCNSRIVQLHQVFESSH   78 (126)
Q Consensus         5 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~------~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~   78 (126)
                      +.|...+.||+|+||.||+|.+..++..+|+|.+........      ....+.+|+.++..++| |||+++++++...+
T Consensus        24 ~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h-~~Iv~~~~~~~~~~  102 (335)
T 3dls_A           24 QKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEH-ANIIKVLDIFENQG  102 (335)
T ss_dssp             HHEEEEEECSSSSSCSEEEEEETTTTEEEEEEEEESTTSCTTSEEEETTTEEEEHHHHHHTTCCC-TTBCCEEEEEECSS
T ss_pred             cceEEEeEEEecCCEEEEEEEECCCCcEEEEEEEehhhcccccccchHHHHHHHHHHHHHHhCCC-CCEeeEEEEEeeCC
Confidence            457778899999999999999999999999999987643221      22247789999999998 99999999999999


Q ss_pred             eEEEEEeccCcc-cHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          79 DMILLLELLTSA-VDSKIRESFGSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        79 ~~~lv~e~~~~~-~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      ..++|||++..| +|.+++.....+++..+..++.|++.|++|||+.++
T Consensus       103 ~~~lv~e~~~~g~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~i  151 (335)
T 3dls_A          103 FFQLVMEKHGSGLDLFAFIDRHPRLDEPLASYIFRQLVSAVGYLRLKDI  151 (335)
T ss_dssp             EEEEEEECCTTSCBHHHHHHTCCCCCHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred             EEEEEEEeCCCCccHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCe
Confidence            999999999776 899999887889999999999999999999998763

>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}

Probab=99.88  E-value=1.8e-22  Score=129.92  Aligned_cols=121  Identities=18%  Similarity=0.260  Sum_probs=99.4

Q ss_pred             cccccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCc------------------------hhHHHHHHHHHHHH
Q psy8006           4 IKNIISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRST------------------------DLKAEILHEVAVLE   59 (126)
Q Consensus         4 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~------------------------~~~~~~~~e~~~l~   59 (126)
                      +++|...+.||+|+||.||+|.+..++..+|+|.+.......                        .....+.+|+.++.
T Consensus        12 ~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~   91 (298)
T 2zv2_A           12 LNQYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIAILK   91 (298)
T ss_dssp             ETTEEEEEEEEC--CCEEEEEEETTTTEEEEEEEEECC-------------------------------CHHHHHHHHHH
T ss_pred             ecceEEEeEEeecCCEEEEEEEECCCCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHHHHHHH
Confidence            567888999999999999999999999999999998654211                        11235889999999


Q ss_pred             HhcCCCCceeeeeeeEe--CCeEEEEEeccCcccHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          60 ACRCNSRIVQLHQVFES--SHDMILLLELLTSAVDSKIRESFGSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        60 ~~~~~~~iv~l~~~~~~--~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      .++| |||+++++.+..  .+..++||||+++++|.++.. ...+++..+..++.|++.|++|||+.++
T Consensus        92 ~l~h-~~iv~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~~i  158 (298)
T 2zv2_A           92 KLDH-PNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPT-LKPLSEDQARFYFQDLIKGIEYLHYQKI  158 (298)
T ss_dssp             TCCC-TTBCCEEEEEECSSSSEEEEEEECCTTCBSCCSSC-SSCCCHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred             hCCC-CCCCeEEEEEEcCCCCEEEEEEecCCCCcHHHHhh-cCCCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence            9998 999999999986  568999999999998876554 3579999999999999999999998763

>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*

Probab=99.88  E-value=1.8e-21  Score=127.98  Aligned_cols=118  Identities=17%  Similarity=0.196  Sum_probs=102.0

Q ss_pred             ccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCc-hhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeEEEEEe
Q psy8006           7 IISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRST-DLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLLE   85 (126)
Q Consensus         7 ~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~-~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~~lv~e   85 (126)
                      |...+.||+|+||.||+|.+..++..+|+|.+....... .....+.+|+.++.+++| |||+++++++..++..++|||
T Consensus        56 y~~~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~h-pniv~~~~~~~~~~~~~lv~e  134 (348)
T 1u5q_A           56 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRH-PNTIQYRGCYLREHTAWLVME  134 (348)
T ss_dssp             EEEEEEEEECSSEEEEEEEETTTTEEEEEEEEESCSSCHHHHHHHHHHHHHHHHHCCC-TTBCCEEEEEEETTEEEEEEE
T ss_pred             eeeeeEEccCCCEEEEEEEEccCCeEEEEEEEccccccchHHHHHHHHHHHHHHhCCC-CCEeeEEEEEEECCeEEEEEe
Confidence            566788999999999999999999999999998654332 234568999999999998 999999999999999999999


Q ss_pred             ccCcccHHHHHH-hcCCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          86 LLTSAVDSKIRE-SFGSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        86 ~~~~~~L~~~~~-~~~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      |+.++ +.+++. .+..+++..+..++.|++.|++|||+.++
T Consensus       135 ~~~g~-l~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~i  175 (348)
T 1u5q_A          135 YCLGS-ASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHNM  175 (348)
T ss_dssp             CCSEE-HHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred             cCCCC-HHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCe
Confidence            99865 766664 45679999999999999999999998764

>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A

Probab=99.88  E-value=7.9e-22  Score=130.63  Aligned_cols=120  Identities=10%  Similarity=0.123  Sum_probs=101.8

Q ss_pred             ccccceeeccCccceeEEEEEEc-------cCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHh-cCCCCceeeeeeeEe
Q psy8006           5 KNIISSIINDMGKYATVRRCRDR-------KNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEAC-RCNSRIVQLHQVFES   76 (126)
Q Consensus         5 ~~~~~~~~lg~g~~~~v~~~~~~-------~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~-~~~~~iv~l~~~~~~   76 (126)
                      ++|...+.||+|+||.||+|.+.       .++..+|+|.+.... .......+.+|+.++..+ +| |||+++++.+..
T Consensus        81 ~~~~~~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~~h-pnIv~~~~~~~~  158 (370)
T 2psq_A           81 DKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDA-TEKDLSDLVSEMEMMKMIGKH-KNIINLLGACTQ  158 (370)
T ss_dssp             GGEEEEEEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTTC-BHHHHHHHHHHHHHHHHSCCC-TTBCCEEEEECS
T ss_pred             HHCEeeeEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEecCCc-CHHHHHHHHHHHHHHHHhcCC-CCEeeEEEEEcc
Confidence            56777889999999999999864       344579999997653 233345699999999999 56 999999999999


Q ss_pred             CCeEEEEEeccCcccHHHHHHhcC----------------CCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          77 SHDMILLLELLTSAVDSKIRESFG----------------SKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        77 ~~~~~lv~e~~~~~~L~~~~~~~~----------------~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      .+..|+||||+++++|.+++....                .++...+..++.|++.|++|||+.++
T Consensus       159 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~i  224 (370)
T 2psq_A          159 DGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKC  224 (370)
T ss_dssp             SSSCEEEEECCTTCBHHHHHHHTCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred             CCCEEEEEEcCCCCCHHHHHHhhCCccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCCe
Confidence            999999999999999999987542                47899999999999999999998763

>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7

Probab=99.88  E-value=8.4e-22  Score=128.79  Aligned_cols=121  Identities=21%  Similarity=0.166  Sum_probs=104.5

Q ss_pred             cccccceeeccCccceeEEEEEEc-----cCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCC
Q psy8006           4 IKNIISSIINDMGKYATVRRCRDR-----KNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSH   78 (126)
Q Consensus         4 ~~~~~~~~~lg~g~~~~v~~~~~~-----~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~   78 (126)
                      .++|...+.||+|+||.||++.+.     .++..+|+|.+..... ......+.+|+.++..++| |||+++++++...+
T Consensus        46 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~h-p~iv~~~~~~~~~~  123 (343)
T 1luf_A           46 RNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEAS-ADMQADFQREAALMAEFDN-PNIVKLLGVCAVGK  123 (343)
T ss_dssp             GGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCC-HHHHHHHHHHHHHHHTCCC-TTBCCEEEEECSSS
T ss_pred             HHHCeeeeeeeecCCeeEEEEEecCcCCCCCceeEEEEEeccccC-HHHHHHHHHHHHHHHhCCC-CCEEEEEEEEccCC
Confidence            356778899999999999999986     3457899999976532 3334568999999999998 99999999999889


Q ss_pred             eEEEEEeccCcccHHHHHHhc------------------------CCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          79 DMILLLELLTSAVDSKIRESF------------------------GSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        79 ~~~lv~e~~~~~~L~~~~~~~------------------------~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      ..++||||+++++|.+++...                        ..+++..+..++.|++.|+.|||+.++
T Consensus       124 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i  195 (343)
T 1luf_A          124 PMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSERKF  195 (343)
T ss_dssp             SCEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred             ceEEEEecCCCCcHHHHHHHhCcccccccccccccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhCCe
Confidence            999999999999999988753                        468999999999999999999998764

>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A

Probab=99.88  E-value=1.4e-21  Score=124.89  Aligned_cols=118  Identities=14%  Similarity=0.130  Sum_probs=100.6

Q ss_pred             cccccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeEEEE
Q psy8006           4 IKNIISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILL   83 (126)
Q Consensus         4 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~~lv   83 (126)
                      .++|...+.||+|+||.||.+.+. ++..+|+|.+......   ...+.+|+.++..++| |||+++++.+...+..++|
T Consensus        23 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~---~~~~~~E~~~l~~l~h-~~i~~~~~~~~~~~~~~lv   97 (283)
T 3gen_A           23 PKDLTFLKELGTGQFGVVKYGKWR-GQYDVAIKMIKEGSMS---EDEFIEEAKVMMNLSH-EKLVQLYGVCTKQRPIFII   97 (283)
T ss_dssp             GGGEEEEEECC---CEEEEEEEET-TTEEEEEEEECTTSBC---HHHHHHHHHHHHTCCC-TTBCCEEEEECSSSSEEEE
T ss_pred             HHHHHhHhhcCCCCCceEEEEEEc-CCCeEEEEEecCCCCC---HHHHHHHHHHHhcCCC-CCEeeEEEEEecCCCeEEE
Confidence            356777899999999999999876 5678999999865443   3468899999999998 9999999999998999999


Q ss_pred             EeccCcccHHHHHHh-cCCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          84 LELLTSAVDSKIRES-FGSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        84 ~e~~~~~~L~~~~~~-~~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      |||+++++|.+++.. ...+++..+..++.|++.|+.|||+.++
T Consensus        98 ~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i  141 (283)
T 3gen_A           98 TEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQF  141 (283)
T ss_dssp             ECCCTTCBHHHHHHCGGGCCCHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred             EeccCCCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHCCc
Confidence            999999999998875 4579999999999999999999998764

>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*

Probab=99.88  E-value=1.3e-21  Score=127.36  Aligned_cols=116  Identities=16%  Similarity=0.263  Sum_probs=102.6

Q ss_pred             ccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeEEEEEec
Q psy8006           7 IISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLLEL   86 (126)
Q Consensus         7 ~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~~lv~e~   86 (126)
                      +...+.||+|+||.||+|.+..+|..+|+|.+.....  .....+.+|+.++..++| |||+++++.+...+..++||||
T Consensus        47 ~~~~~~lg~G~~g~V~~a~~~~~g~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h-~niv~~~~~~~~~~~~~lv~e~  123 (321)
T 2c30_A           47 LDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQ--QRRELLFNEVVIMRDYQH-FNVVEMYKSYLVGEELWVLMEF  123 (321)
T ss_dssp             EEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTC--CSHHHHHHHHHHHTTCCC-TTBCCEEEEEEETTEEEEEECC
T ss_pred             hhccEEeccCCCeEEEEEEECCCCcEEEEEEEeccch--hHHHHHHHHHHHHHhCCC-CCcceEEEEEEECCEEEEEEec
Confidence            4456689999999999999999999999999986543  224468899999999998 9999999999999999999999


Q ss_pred             cCcccHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          87 LTSAVDSKIRESFGSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        87 ~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      +++++|.+++.. ..+++..+..++.|++.|++|||+.++
T Consensus       124 ~~~~~L~~~l~~-~~l~~~~~~~i~~qi~~~L~~LH~~~i  162 (321)
T 2c30_A          124 LQGGALTDIVSQ-VRLNEEQIATVCEAVLQALAYLHAQGV  162 (321)
T ss_dssp             CCSCBHHHHHTT-CCCCHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred             CCCCCHHHHHHh-cCCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence            999999998875 569999999999999999999998763

>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*

Probab=99.88  E-value=5.3e-22  Score=129.01  Aligned_cols=120  Identities=16%  Similarity=0.182  Sum_probs=100.8

Q ss_pred             ccccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCC------chhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCC
Q psy8006           5 KNIISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRS------TDLKAEILHEVAVLEACRCNSRIVQLHQVFESSH   78 (126)
Q Consensus         5 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~------~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~   78 (126)
                      ++|...+.||+|+||.||+|.+..++..+|+|.+......      ......+.+|+.++..++| |||+++++.+....
T Consensus        10 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h-~~i~~~~~~~~~~~   88 (322)
T 2ycf_A           10 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNH-PCIIKIKNFFDAED   88 (322)
T ss_dssp             HHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECC---------------CHHHHHHHHHHCCC-TTBCCEEEEEESSS
T ss_pred             hceeEeeEEecCCCEEEEEEEEcCCCcEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhCCC-CCCceEeeEEcCCc
Confidence            3577789999999999999999999999999999765321      1112247899999999998 99999999987554


Q ss_pred             eEEEEEeccCcccHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          79 DMILLLELLTSAVDSKIRESFGSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        79 ~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                       .++||||+++++|.+++.....+++..+..++.|++.|++|||+.++
T Consensus        89 -~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i  135 (322)
T 2ycf_A           89 -YYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHENGI  135 (322)
T ss_dssp             -EEEEEECCTTEETHHHHSTTCCCCHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred             -eEEEEecCCCCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence             89999999999999988877789999999999999999999998763

>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...

Probab=99.88  E-value=1.5e-21  Score=124.99  Aligned_cols=119  Identities=19%  Similarity=0.110  Sum_probs=105.5

Q ss_pred             cccccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeEEEE
Q psy8006           4 IKNIISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILL   83 (126)
Q Consensus         4 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~~lv   83 (126)
                      ..+|...+.||+|+||.||.|.+..++..+|+|.+....   .....+.+|+.+++.++| ||++++++.+..++..++|
T Consensus        12 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~E~~~l~~l~h-~~i~~~~~~~~~~~~~~~v   87 (288)
T 3kfa_A           12 RTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT---MEVEEFLKEAAVMKEIKH-PNLVQLLGVCTREPPFYII   87 (288)
T ss_dssp             GGGEEEEEESGGGTTCSEEEEEEGGGTEEEEEEEECSCS---THHHHHHHHHHHHHHCCC-TTBCCEEEEECSSSSEEEE
T ss_pred             ccceeEEeecCCCCceeEEEeEecCCCEEEEEEecCcCH---HHHHHHHHHHHHHHhCCC-CCEeeEEEEEccCCCEEEE
Confidence            356778899999999999999999999999999997543   234568999999999998 9999999999999999999


Q ss_pred             EeccCcccHHHHHHhc--CCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          84 LELLTSAVDSKIRESF--GSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        84 ~e~~~~~~L~~~~~~~--~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      ||++++++|.+++...  ..+++..+..++.|++.|++|||+.++
T Consensus        88 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i  132 (288)
T 3kfa_A           88 TEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNF  132 (288)
T ss_dssp             EECCTTEEHHHHHHHCCTTTSCHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred             EEcCCCCcHHHHHHhcccCCccHhHHHHHHHHHHHHHHHHHHCCc
Confidence            9999999999998763  459999999999999999999998764

>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A

Probab=99.88  E-value=2.2e-21  Score=128.31  Aligned_cols=120  Identities=19%  Similarity=0.254  Sum_probs=104.9

Q ss_pred             cccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCC--c----hhHHHHHHHHHHHHHh-cCCCCceeeeeeeEeCC
Q psy8006           6 NIISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRS--T----DLKAEILHEVAVLEAC-RCNSRIVQLHQVFESSH   78 (126)
Q Consensus         6 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~--~----~~~~~~~~e~~~l~~~-~~~~~iv~l~~~~~~~~   78 (126)
                      +|...+.||+|+||.||+|.+..+|..||+|+++.....  .    .....+.+|+.++..+ +| |||+++++++...+
T Consensus        95 ~y~~~~~lg~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h-p~iv~~~~~~~~~~  173 (365)
T 2y7j_A           95 KYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGH-PHIITLIDSYESSS  173 (365)
T ss_dssp             HEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHTTC-TTBCCEEEEEEBSS
T ss_pred             hcccceEEecCCCEEEEEEEECCCCcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhcCC-CCEeEEEEEEeeCC
Confidence            466678999999999999999999999999999875421  1    1234578999999999 56 99999999999999


Q ss_pred             eEEEEEeccCcccHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          79 DMILLLELLTSAVDSKIRESFGSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        79 ~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      ..++||||+++++|.+++.....+++..+..++.|++.|+.|||+.++
T Consensus       174 ~~~lv~e~~~g~~L~~~l~~~~~l~~~~~~~i~~qi~~~L~~LH~~gi  221 (365)
T 2y7j_A          174 FMFLVFDLMRKGELFDYLTEKVALSEKETRSIMRSLLEAVSFLHANNI  221 (365)
T ss_dssp             EEEEEECCCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred             EEEEEEEeCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCe
Confidence            999999999999999999887789999999999999999999998763

>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*

Probab=99.88  E-value=2.2e-21  Score=124.86  Aligned_cols=121  Identities=15%  Similarity=0.189  Sum_probs=103.7

Q ss_pred             ccccccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeEEE
Q psy8006           3 NIKNIISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMIL   82 (126)
Q Consensus         3 ~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~~l   82 (126)
                      ..+.|...+.||+|+||.||+|.+..++..+|+|.+.....  .....+.+|+.++..++| |||+++++.+..++..++
T Consensus        17 ~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~--~~~~~~~~e~~~l~~l~h-~~i~~~~~~~~~~~~~~l   93 (302)
T 2j7t_A           17 PNEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSE--EELEDYIVEIEILATCDH-PYIVKLLGAYYHDGKLWI   93 (302)
T ss_dssp             GGGTEEEEEEEECSTTCCEEEEEETTTCCEEEEEEEC------CCHHHHHHHHHHHHHCCC-TTBCCEEEEEECC-CEEE
T ss_pred             CccceeecceeccCCCeEEEEEEEcCCCcEEEEEEecCCCH--HHHHHHHHHHHHHhcCCC-CCEeeeeeeeeeCCeEEE
Confidence            34567788899999999999999999999999999876532  234568899999999998 999999999999999999


Q ss_pred             EEeccCcccHHHHHHh-cCCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          83 LLELLTSAVDSKIRES-FGSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        83 v~e~~~~~~L~~~~~~-~~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      |||++++++|.+++.. ...+++..+..++.|++.|+.|||+.++
T Consensus        94 v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i  138 (302)
T 2j7t_A           94 MIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFLHSKRI  138 (302)
T ss_dssp             EEECCTTEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred             EEEeCCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHhcCCc
Confidence            9999999999888765 4679999999999999999999998764

>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}

Probab=99.88  E-value=2.4e-21  Score=125.54  Aligned_cols=121  Identities=22%  Similarity=0.187  Sum_probs=100.2

Q ss_pred             ccccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeEEEEE
Q psy8006           5 KNIISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLL   84 (126)
Q Consensus         5 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~~lv~   84 (126)
                      ++|...+.||+|+||.||+|.+..+++.+|+|.+...............|+..+..+..|||++++++++...+..++||
T Consensus        57 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~l~~~~~~~~~~~lv~  136 (311)
T 3p1a_A           57 QSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQAWEEGGILYLQT  136 (311)
T ss_dssp             HHEEEEEEEEEETTEEEEEEEETTTSCEEEEEEESSSCCSHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred             hheeeeheeccCCCeEEEEEEECCCCeEEEEEEecccccChHHHHHHHHHHHHHHHhcCCCcEEEEEEEEEeCCEEEEEE
Confidence            35677789999999999999999999999999987665444444456777777777733499999999999999999999


Q ss_pred             eccCcccHHHHHHh-cCCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          85 ELLTSAVDSKIRES-FGSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        85 e~~~~~~L~~~~~~-~~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      |++.+ +|.+++.. +..+++..+..++.|++.|++|||+.++
T Consensus       137 e~~~~-~L~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~i  178 (311)
T 3p1a_A          137 ELCGP-SLQQHCEAWGASLPEAQVWGYLRDTLLALAHLHSQGL  178 (311)
T ss_dssp             ECCCC-BHHHHHHHHCSCCCHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred             eccCC-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCE
Confidence            99955 57666654 4579999999999999999999998763

>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A

Probab=99.88  E-value=7.6e-22  Score=134.98  Aligned_cols=118  Identities=19%  Similarity=0.130  Sum_probs=104.5

Q ss_pred             ccccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeEEEEE
Q psy8006           5 KNIISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLL   84 (126)
Q Consensus         5 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~~lv~   84 (126)
                      .+|...+.||+|+||.||+|.+..++..+|+|.+......   ...+.+|+.++.+++| |||+++++++...+..++||
T Consensus       220 ~~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~~---~~~~~~E~~~l~~l~h-pniv~l~~~~~~~~~~~lv~  295 (495)
T 1opk_A          220 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME---VEEFLKEAAVMKEIKH-PNLVQLLGVCTREPPFYIIT  295 (495)
T ss_dssp             GGEEEEEESGGGTTSSEEEEEEGGGTEEEEEEECCSSSSC---HHHHHHHHHHHHHCCC-TTBCCEEEEECSSSSCEEEE
T ss_pred             HHceeeeEecCCCCeEEEEEEEcCCCeEEEEEEecCcccc---hHHHHHHHHHHHhcCC-CCEeeEEEEEecCCcEEEEE
Confidence            3466688999999999999999998999999999765432   4579999999999998 99999999999888999999


Q ss_pred             eccCcccHHHHHHhc--CCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          85 ELLTSAVDSKIRESF--GSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        85 e~~~~~~L~~~~~~~--~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      ||+++++|.+++...  ..+++..+..++.|++.||+|||+.++
T Consensus       296 E~~~~g~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~i  339 (495)
T 1opk_A          296 EFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNF  339 (495)
T ss_dssp             ECCTTCBHHHHHHHSCTTTSCHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred             EccCCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHhCCc
Confidence            999999999998753  468999999999999999999998763

>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7

Probab=99.88  E-value=8e-22  Score=130.48  Aligned_cols=119  Identities=17%  Similarity=0.189  Sum_probs=96.9

Q ss_pred             ccccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCC------
Q psy8006           5 KNIISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSH------   78 (126)
Q Consensus         5 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~------   78 (126)
                      ..|...+.||+|+||.||.|.+..+|..||+|.+............+.+|+.+++.++| |||+++++++....      
T Consensus        25 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h-pnIv~l~~~~~~~~~~~~~~  103 (367)
T 1cm8_A           25 AVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRH-ENVIGLLDVFTPDETLDDFT  103 (367)
T ss_dssp             SSEEEEEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCB-TTBCCCSEEECSCSSTTTCC
T ss_pred             ceEEEeEEeeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCC-cCCCCceeeEecCCccccCc
Confidence            35777889999999999999999999999999997655444445568999999999998 99999999987653      


Q ss_pred             eEEEEEeccCcccHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          79 DMILLLELLTSAVDSKIRESFGSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        79 ~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      ..|+|||++ +++|.++++. ..+++..+..++.|++.|++|||+.++
T Consensus       104 ~~~lv~e~~-~~~L~~~~~~-~~l~~~~~~~~~~qi~~~L~~LH~~~i  149 (367)
T 1cm8_A          104 DFYLVMPFM-GTDLGKLMKH-EKLGEDRIQFLVYQMLKGLRYIHAAGI  149 (367)
T ss_dssp             CCEEEEECC-SEEHHHHHHH-CCCCHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred             eEEEEEecC-CCCHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCc
Confidence            469999999 6679988876 569999999999999999999998763

>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}

Probab=99.88  E-value=2.4e-21  Score=125.51  Aligned_cols=119  Identities=15%  Similarity=0.065  Sum_probs=101.1

Q ss_pred             ccccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeE----eCCeE
Q psy8006           5 KNIISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFE----SSHDM   80 (126)
Q Consensus         5 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~----~~~~~   80 (126)
                      ++|...+.||+|+||.||++.+..++..+|+|.+....  ......+.+|+.++..++| |||+++++++.    .....
T Consensus        29 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h-~~iv~~~~~~~~~~~~~~~~  105 (317)
T 2buj_A           29 KHYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHE--QQDREEAQREADMHRLFNH-PNILRLVAYCLRERGAKHEA  105 (317)
T ss_dssp             EEEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEESS--HHHHHHHHHHHHHHHTCCC-TTBCCCCEEEEEEETTEEEE
T ss_pred             eEEEEEEEecCCCCeEEEEEEecCCCcEEEEEEEecCC--HHHHHHHHHHHHHHhhcCC-CCeeeEEEEEEeccCCCcee
Confidence            56888899999999999999999999999999987642  3334568999999999998 99999999886    23478


Q ss_pred             EEEEeccCcccHHHHHHh----cCCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          81 ILLLELLTSAVDSKIRES----FGSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        81 ~lv~e~~~~~~L~~~~~~----~~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      ++||||+++++|.+++..    ...+++..+..++.|++.|++|||+.++
T Consensus       106 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~i  155 (317)
T 2buj_A          106 WLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHAKGY  155 (317)
T ss_dssp             EEEEECCTTCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred             EEEEEeCCCCcHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCc
Confidence            999999999999888865    4579999999999999999999998763

>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*

Probab=99.88  E-value=4.5e-21  Score=123.62  Aligned_cols=119  Identities=15%  Similarity=0.222  Sum_probs=105.6

Q ss_pred             ccccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeEEEEE
Q psy8006           5 KNIISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLL   84 (126)
Q Consensus         5 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~~lv~   84 (126)
                      ..|...+.||+|+||.||+|.+..++..+|+|.+...... .....+.+|+.++..++| ||++++++.+......++||
T Consensus        22 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~e~~~l~~l~h-~~i~~~~~~~~~~~~~~lv~   99 (303)
T 3a7i_A           22 ELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAE-DEIEDIQQEITVLSQCDS-PYVTKYYGSYLKDTKLWIIM   99 (303)
T ss_dssp             GTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEETTTCS-TTHHHHHHHHHHHHHCCC-TTBCCEEEEEEETTEEEEEE
T ss_pred             HHHHHhhhhcccCCeEEEEEEECCCCcEEEEEEecccccH-HHHHHHHHHHHHHHhCCC-CCEeEEEEEEecCCeEEEEE
Confidence            3467788999999999999999999999999999866432 234578999999999998 99999999999999999999


Q ss_pred             eccCcccHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          85 ELLTSAVDSKIRESFGSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        85 e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      ||+++++|.+++.. ..+++..+..++.|++.|+.|||+.++
T Consensus       100 e~~~~~~L~~~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~i  140 (303)
T 3a7i_A          100 EYLGGGSALDLLEP-GPLDETQIATILREILKGLDYLHSEKK  140 (303)
T ss_dssp             ECCTTEEHHHHHTT-SCCCHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred             EeCCCCcHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCC
Confidence            99999999998875 569999999999999999999998763

>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C

Probab=99.88  E-value=1.3e-21  Score=130.78  Aligned_cols=110  Identities=15%  Similarity=0.174  Sum_probs=94.3

Q ss_pred             eeeccCccceeEEEEEEccCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEe----CCeEEEEEe
Q psy8006          10 SIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFES----SHDMILLLE   85 (126)
Q Consensus        10 ~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~----~~~~~lv~e   85 (126)
                      .+.||+|+||.||++.+..++..+|+|.+...       ....+|+.++.+..+||||+++++.+..    ...+|+|||
T Consensus        67 ~~~LG~G~~g~V~~~~~~~~~~~vAiK~~~~~-------~~~~~E~~~~~~~~~hp~iv~l~~~~~~~~~~~~~~~lv~E  139 (400)
T 1nxk_A           67 SQVLGLGINGKVLQIFNKRTQEKFALKMLQDC-------PKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVME  139 (400)
T ss_dssp             EEEEEEETTEEEEEEEETTTCCEEEEEEEECS-------HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEEEEE
T ss_pred             cceeeeccCeEEEEEEECCCCCEEEEEEeCcc-------hhHHHHHHHHHHhcCCCCcceEeEEEeecccCCcEEEEEEE
Confidence            36899999999999999999999999999642       2467888888666545999999998865    567899999


Q ss_pred             ccCcccHHHHHHhc--CCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          86 LLTSAVDSKIRESF--GSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        86 ~~~~~~L~~~~~~~--~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      |+++++|.+++...  ..+++..+..++.|++.|+.|||+.++
T Consensus       140 ~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~i  182 (400)
T 1nxk_A          140 CLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINI  182 (400)
T ss_dssp             CCCSEEHHHHHHCC---CCBHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred             eCCCCcHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCc
Confidence            99999999998764  359999999999999999999998763

>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*

Probab=99.88  E-value=1.5e-21  Score=136.87  Aligned_cols=115  Identities=17%  Similarity=0.197  Sum_probs=100.4

Q ss_pred             eeeccCccceeEEEEEE--ccCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeEEEEEecc
Q psy8006          10 SIINDMGKYATVRRCRD--RKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLLELL   87 (126)
Q Consensus        10 ~~~lg~g~~~~v~~~~~--~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~~lv~e~~   87 (126)
                      .+.||+|+||.||+|.+  ..++..+|+|++............+.+|+.++..++| |||+++++++. .+..++||||+
T Consensus       374 ~~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~h-pnIv~l~~~~~-~~~~~lv~E~~  451 (635)
T 4fl3_A          374 DKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDN-PYIVRMIGICE-AESWMLVMEMA  451 (635)
T ss_dssp             EEEEEECSSEEEEEEEEECSSCEEEEEEEEECGGGGCGGGHHHHHHHHHHHHHCCC-TTBCCEEEEEE-SSSEEEEEECC
T ss_pred             CCEeccCCCEEEEEEEEcCCCcceEEEEEEeccccCCHHHHHHHHHHHHHHHhCCC-CCEeeEEEEEe-cCCEEEEEEcc
Confidence            45799999999999954  4566789999998765544556679999999999998 99999999886 45588999999


Q ss_pred             CcccHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          88 TSAVDSKIRESFGSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        88 ~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      ++++|.+++..+..+++..+..++.|++.||+|||+.++
T Consensus       452 ~~g~L~~~l~~~~~l~~~~~~~i~~qi~~~L~yLH~~~i  490 (635)
T 4fl3_A          452 ELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNF  490 (635)
T ss_dssp             TTEEHHHHHHHCTTCCHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred             CCCCHHHHHhhCCCCCHHHHHHHHHHHHHHHHHHHHCCE
Confidence            999999999887889999999999999999999998764

>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*

Probab=99.88  E-value=1.1e-21  Score=126.86  Aligned_cols=121  Identities=14%  Similarity=0.146  Sum_probs=103.3

Q ss_pred             cccccceeeccCccceeEEEEEEc-----cCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCC
Q psy8006           4 IKNIISSIINDMGKYATVRRCRDR-----KNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSH   78 (126)
Q Consensus         4 ~~~~~~~~~lg~g~~~~v~~~~~~-----~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~   78 (126)
                      .++|...+.||+|+||.||++.+.     .++..+|+|.+.... .......+.+|+.++..++| |||+++++.+...+
T Consensus        22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~h-p~iv~~~~~~~~~~   99 (314)
T 2ivs_A           22 RKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENA-SPSELRDLLSEFNVLKQVNH-PHVIKLYGACSQDG   99 (314)
T ss_dssp             GGGEEEEEEEEECSSSEEEEEEEETGGGCSSEEEEEEEECCTTC-CHHHHHHHHHHHHHHTTCCC-TTBCCEEEEECSSS
T ss_pred             hhheeeeeeecccCCeeEEEEEEeccCcccCcceEEEEeccCCC-CHHHHHHHHHHHHHHhhCCC-CceeeEEEEEecCC
Confidence            356778899999999999999873     445789999997543 23334568999999999998 99999999999999


Q ss_pred             eEEEEEeccCcccHHHHHHhcC------------------------CCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          79 DMILLLELLTSAVDSKIRESFG------------------------SKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        79 ~~~lv~e~~~~~~L~~~~~~~~------------------------~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      ..++||||+++++|.+++....                        .+++..+..++.|++.|++|||+.++
T Consensus       100 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i  171 (314)
T 2ivs_A          100 PLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMKL  171 (314)
T ss_dssp             SCEEEEECCTTCBHHHHHHHTTTSTTEEC----------------CEECHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred             ceEEEEeecCCCCHHHHHHHHhhccCCcccccccccccccccccccCcCHHHHHHHHHHHHHHHHHHHHCCC
Confidence            9999999999999999987643                        38999999999999999999998763

>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*

Probab=99.88  E-value=1.8e-21  Score=126.80  Aligned_cols=122  Identities=16%  Similarity=0.137  Sum_probs=102.9

Q ss_pred             ccccccceeeccCccceeEEEEEEccCCcEE--EEEEeecCCCCchhHHHHHHHHHHHHHh-cCCCCceeeeeeeEeCCe
Q psy8006           3 NIKNIISSIINDMGKYATVRRCRDRKNGTQY--AAKFLRKKRRSTDLKAEILHEVAVLEAC-RCNSRIVQLHQVFESSHD   79 (126)
Q Consensus         3 ~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~--aiK~~~~~~~~~~~~~~~~~e~~~l~~~-~~~~~iv~l~~~~~~~~~   79 (126)
                      ++++|...+.||+|+||.||++.+..++..+  ++|.+..... ......+.+|+.++.++ +| |||+++++.+...+.
T Consensus        23 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~v~iK~~~~~~~-~~~~~~~~~E~~~l~~l~~h-p~iv~~~~~~~~~~~  100 (327)
T 1fvr_A           23 DWNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYAS-KDDHRDFAGELEVLCKLGHH-PNIINLLGACEHRGY  100 (327)
T ss_dssp             CGGGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC-------CHHHHHHHHHTTCCCC-TTBCCEEEEEEETTE
T ss_pred             cHHHccceeeeecCCCceEEEEEEccCCcccceeeeeeccccc-hHHHHHHHHHHHHHHhccCC-CchhhhceeeeeCCc
Confidence            3567888999999999999999998888755  9998875332 22334688999999999 56 999999999999999


Q ss_pred             EEEEEeccCcccHHHHHHhcC----------------CCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          80 MILLLELLTSAVDSKIRESFG----------------SKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        80 ~~lv~e~~~~~~L~~~~~~~~----------------~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      .++|||++++++|.+++....                .+++..+..++.|++.|++|||+.++
T Consensus       101 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~i  163 (327)
T 1fvr_A          101 LYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQF  163 (327)
T ss_dssp             EEEEECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred             eEEEEecCCCCCHHHHHHhcccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCCc
Confidence            999999999999999987543                69999999999999999999998763

>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*

Probab=99.88  E-value=1.7e-21  Score=123.61  Aligned_cols=118  Identities=12%  Similarity=0.104  Sum_probs=102.9

Q ss_pred             cccccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeEEEE
Q psy8006           4 IKNIISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILL   83 (126)
Q Consensus         4 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~~lv   83 (126)
                      .++|...+.||+|+||.||++.+. ++..+|+|.+......   ...+.+|+.++..++| |||+++++.+...+..++|
T Consensus         7 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~---~~~~~~E~~~l~~l~h-~~i~~~~~~~~~~~~~~lv   81 (268)
T 3sxs_A            7 REEITLLKELGSGQFGVVKLGKWK-GQYDVAVKMIKEGSMS---EDEFFQEAQTMMKLSH-PKLVKFYGVCSKEYPIYIV   81 (268)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEET-TTEEEEEEEECBTTBC---HHHHHHHHHHHHHCCC-TTBCCEEEEECSSSSEEEE
T ss_pred             hhheeeeeeeccCCCceEEEEEec-CceeEEEEEeccCCCc---HHHHHHHHHHHHhCCC-CCEeeEEEEEccCCceEEE
Confidence            356778899999999999999775 5677999999865433   3468899999999998 9999999999988899999


Q ss_pred             EeccCcccHHHHHHhc-CCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          84 LELLTSAVDSKIRESF-GSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        84 ~e~~~~~~L~~~~~~~-~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      ||++++++|.+++... ..+++..+..++.|++.|++|||+.++
T Consensus        82 ~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i  125 (268)
T 3sxs_A           82 TEYISNGCLLNYLRSHGKGLEPSQLLEMCYDVCEGMAFLESHQF  125 (268)
T ss_dssp             EECCTTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred             EEccCCCcHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence            9999999999988764 359999999999999999999998763

>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*

Probab=99.88  E-value=1.9e-21  Score=125.20  Aligned_cols=120  Identities=16%  Similarity=0.166  Sum_probs=99.9

Q ss_pred             ccccceeeccCccceeEEEEE----EccCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeC--C
Q psy8006           5 KNIISSIINDMGKYATVRRCR----DRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESS--H   78 (126)
Q Consensus         5 ~~~~~~~~lg~g~~~~v~~~~----~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~--~   78 (126)
                      ..|...+.||+|+||.||.|.    +..++..+|+|.+..... ......+.+|+.++..++| ||++++++.+...  .
T Consensus        21 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~h-~~i~~~~~~~~~~~~~   98 (302)
T 4e5w_A           21 RFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESG-GNHIADLKKEIEILRNLYH-ENIVKYKGICTEDGGN   98 (302)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEECTTSSSCSEEEEEEEEC------CCHHHHHHHHHHHHTCCC-TTBCCEEEEEEC---C
T ss_pred             hhhhhhhccCCCCceEEEEEEEccccCccCeEEEEEEeccccc-chhHHHHHHHHHHHHhCCC-CCeeeeeeEEecCCCc
Confidence            346678899999999999998    567889999999986542 2234568999999999998 9999999998766  5


Q ss_pred             eEEEEEeccCcccHHHHHHh-cCCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          79 DMILLLELLTSAVDSKIRES-FGSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        79 ~~~lv~e~~~~~~L~~~~~~-~~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      ..+++|||+++++|.+++.. ...+++..+..++.|++.|++|||+.++
T Consensus        99 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i  147 (302)
T 4e5w_A           99 GIKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYLGSRQY  147 (302)
T ss_dssp             CEEEEEECCTTCBHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred             eEEEEEEeCCCCcHHHHHHhccccCCHHHHHHHHHHHHHHHHHhhcCCc
Confidence            68999999999999999854 4579999999999999999999998763

>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*

Probab=99.88  E-value=9.2e-22  Score=133.70  Aligned_cols=118  Identities=15%  Similarity=0.150  Sum_probs=101.4

Q ss_pred             ccccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeC------C
Q psy8006           5 KNIISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESS------H   78 (126)
Q Consensus         5 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~------~   78 (126)
                      .+|...+.||+|+||.||+|.+..++..||+|.+............+.+|+.+++.++| |||+++++++...      .
T Consensus        62 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~h-pnIv~l~~~~~~~~~~~~~~  140 (464)
T 3ttj_A           62 KRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNH-KNIISLLNVFTPQKTLEEFQ  140 (464)
T ss_dssp             TTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEESGGGSHHHHHHHHHHHHHHHHCCC-TTBCCCSEEECSCCSTTTCC
T ss_pred             CCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEECccccChHHHHHHHHHHHHHHhCCC-CCCCcEEEEEccCCccccCC
Confidence            45777899999999999999999999999999998765444455678999999999998 9999999998654      3


Q ss_pred             eEEEEEeccCcccHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          79 DMILLLELLTSAVDSKIRESFGSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        79 ~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      ..|+||||++++ +.+.+..  .+++..++.++.|++.|++|||+.++
T Consensus       141 ~~~lv~E~~~~~-l~~~~~~--~l~~~~~~~~~~qil~aL~~lH~~~i  185 (464)
T 3ttj_A          141 DVYLVMELMDAN-LCQVIQM--ELDHERMSYLLYQMLCGIKHLHSAGI  185 (464)
T ss_dssp             EEEEEEECCSEE-HHHHHTS--CCCHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred             eEEEEEeCCCCC-HHHHHhh--cCCHHHHHHHHHHHHHHHHHHHHCCc
Confidence            579999999988 6555543  48999999999999999999999874

>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}

Probab=99.88  E-value=8.7e-22  Score=127.94  Aligned_cols=121  Identities=13%  Similarity=0.124  Sum_probs=93.9

Q ss_pred             ccccceeeccCccceeEEEEEEccCCc---EEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeE-
Q psy8006           5 KNIISSIINDMGKYATVRRCRDRKNGT---QYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDM-   80 (126)
Q Consensus         5 ~~~~~~~~lg~g~~~~v~~~~~~~~~~---~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~-   80 (126)
                      .+|...+.||+|+||.||+|.+..++.   .+|+|.+............+.+|+.+++.++| |||+++++++...... 
T Consensus        23 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h-~~iv~~~~~~~~~~~~~  101 (323)
T 3qup_A           23 QQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDH-PHVAKLVGVSLRSRAKG  101 (323)
T ss_dssp             --CEEEEEEEEETTEEEEEEEC-------CEEEEEEC------CHHHHHHHHHHHHHTTCCC-TTBCCCCEEEECC----
T ss_pred             hHeEEeceecccCCeEEEEEEEcccCCcceeEEEEEecccccCHHHHHHHHHHHHHHHHCCC-Cceehhhceeecccccc
Confidence            457788999999999999999877664   79999998765555556679999999999988 9999999998766554 


Q ss_pred             -----EEEEeccCcccHHHHHHhcC------CCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          81 -----ILLLELLTSAVDSKIRESFG------SKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        81 -----~lv~e~~~~~~L~~~~~~~~------~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                           +++|||+++++|.+++....      .+++..+..++.|++.|++|||+.++
T Consensus       102 ~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~i  158 (323)
T 3qup_A          102 RLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLSSRNF  158 (323)
T ss_dssp             ---CEEEEEECCTTCBHHHHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred             CCCccEEEEEeccCCcHHHHHHhhhccccccccCHHHHHHHHHHHHHHHHHHHcCCc
Confidence                 99999999999988885422      58999999999999999999998764

>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}

Probab=99.88  E-value=2.2e-21  Score=129.04  Aligned_cols=121  Identities=17%  Similarity=0.177  Sum_probs=95.7

Q ss_pred             cccccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCC--eEE
Q psy8006           4 IKNIISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSH--DMI   81 (126)
Q Consensus         4 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~--~~~   81 (126)
                      ..+|...+.||+|+||.||+|.+..++..||+|.+..............+|+.++..+..||||+++++++..++  ..|
T Consensus         8 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~l~~~~~~~~~~~~~   87 (388)
T 3oz6_A            8 LRKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLNVLRADNDRDVY   87 (388)
T ss_dssp             HTTEEEEEC-------CEEEEEETTTCCEEEEEEECC--CCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECTTSSCEE
T ss_pred             cCceEEEEEeeeCCCeEEEEEEECCCCCEEEEEEecccccChHHHHHHHHHHHHHHhccCCCCCCeeeeEEecCCCCEEE
Confidence            356788899999999999999999999999999997665444555678899999999983499999999997544  789


Q ss_pred             EEEeccCcccHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          82 LLLELLTSAVDSKIRESFGSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        82 lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      +||||+++ +|.+++.. ..+++..+..++.|++.|++|||+.++
T Consensus        88 lv~e~~~~-~L~~~~~~-~~~~~~~~~~i~~qi~~~L~~LH~~~i  130 (388)
T 3oz6_A           88 LVFDYMET-DLHAVIRA-NILEPVHKQYVVYQLIKVIKYLHSGGL  130 (388)
T ss_dssp             EEEECCSE-EHHHHHHH-TCCCHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred             EEecccCc-CHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHhCCE
Confidence            99999996 58888876 569999999999999999999998763

>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*

Probab=99.88  E-value=2.8e-21  Score=126.05  Aligned_cols=117  Identities=15%  Similarity=0.042  Sum_probs=101.7

Q ss_pred             ccccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeEEEEE
Q psy8006           5 KNIISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLL   84 (126)
Q Consensus         5 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~~lv~   84 (126)
                      .+|...+.||+|+||.||+|.+..++..+|+|.+......    ..+.+|+.++..+.+|||++++++.+...+..++||
T Consensus         9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~----~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~lv~   84 (330)
T 2izr_A            9 PNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKSRA----PQLHLEYRFYKQLGSGDGIPQVYYFGPCGKYNAMVL   84 (330)
T ss_dssp             TTEEEEEECCC-CTTSEEEEEETTTTEEEEEEEEETTCSS----CCHHHHHHHHHHHCSCTTSCCEEEEEEETTEEEEEE
T ss_pred             CCeEEEEEeeccCCceEEEEEECCCCcEEEEEEeccccch----HHHHHHHHHHHHhhCCCCCCEEEEEEecCCccEEEE
Confidence            4678889999999999999999999999999999765322    247889999999943499999999999999999999


Q ss_pred             eccCcccHHHHHHh-cCCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          85 ELLTSAVDSKIRES-FGSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        85 e~~~~~~L~~~~~~-~~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      |++ +++|.+++.. +..+++..+..++.|++.|++|||+.++
T Consensus        85 e~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~i  126 (330)
T 2izr_A           85 ELL-GPSLEDLFDLCDRTFSLKTVLMIAIQLISRMEYVHSKNL  126 (330)
T ss_dssp             ECC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred             EeC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCe
Confidence            999 8889998876 4679999999999999999999998763

>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}

Probab=99.88  E-value=3.8e-21  Score=127.76  Aligned_cols=120  Identities=11%  Similarity=0.127  Sum_probs=102.4

Q ss_pred             ccccceeeccCccceeEEEEEEccC-------CcEEEEEEeecCCCCchhHHHHHHHHHHHHHh-cCCCCceeeeeeeEe
Q psy8006           5 KNIISSIINDMGKYATVRRCRDRKN-------GTQYAAKFLRKKRRSTDLKAEILHEVAVLEAC-RCNSRIVQLHQVFES   76 (126)
Q Consensus         5 ~~~~~~~~lg~g~~~~v~~~~~~~~-------~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~-~~~~~iv~l~~~~~~   76 (126)
                      ++|...+.||+|+||.||+|.+..+       +..+|+|.+..... ......+.+|+.++..+ +| |||+++++.+..
T Consensus        69 ~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~~h-pnIv~~~~~~~~  146 (382)
T 3tt0_A           69 DRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDAT-EKDLSDLISEMEMMKMIGKH-KNIINLLGACTQ  146 (382)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTTCC-HHHHHHHHHHHHHHHHHCCC-TTBCCEEEEECS
T ss_pred             hheEeeeEEecCCCeEEEEEEEccccccccccceEEEEEeeccccC-HHHHHHHHHHHHHHHHhcCC-chhhhheeeecc
Confidence            4677788999999999999997533       34799999976532 33345689999999999 66 999999999999


Q ss_pred             CCeEEEEEeccCcccHHHHHHhcC----------------CCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          77 SHDMILLLELLTSAVDSKIRESFG----------------SKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        77 ~~~~~lv~e~~~~~~L~~~~~~~~----------------~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      ++..++||||+++++|.+++....                .+++..+..++.|++.|++|||+.++
T Consensus       147 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~i  212 (382)
T 3tt0_A          147 DGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKC  212 (382)
T ss_dssp             SSSCEEEEECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred             CCceEEEEEecCCCcHHHHHHHhcccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhCCE
Confidence            999999999999999999987643                48999999999999999999998764

>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}

Probab=99.88  E-value=2.8e-22  Score=131.18  Aligned_cols=121  Identities=18%  Similarity=0.160  Sum_probs=102.6

Q ss_pred             ccccceeeccCccceeEEEEEEccCCcEEEEEEeecCCC---CchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeEE
Q psy8006           5 KNIISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRR---STDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMI   81 (126)
Q Consensus         5 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~---~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~~   81 (126)
                      +.|...+.||+|+||.||++.+..++..+|+|.+.....   .......+.+|+.++..++| |||+++++++...+..+
T Consensus        26 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h-pniv~~~~~~~~~~~~~  104 (345)
T 3hko_A           26 KKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHH-PNIARLYEVYEDEQYIC  104 (345)
T ss_dssp             HHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHC---CHHHHHHHHHHHHHHCCC-TTBCCEEEEEECSSEEE
T ss_pred             hheeecceeeecCCeEEEEEEECCCCceEEEeehhhhhhcccCHHHHHHHHHHHHHHHhCCC-CCcceeehhhccCCeEE
Confidence            357778899999999999999999999999999986532   23345579999999999998 99999999999999999


Q ss_pred             EEEeccCcccHHHHHHh----------------------------------------cCCCCHHHHHHHHHHHHHHHHhh
Q psy8006          82 LLLELLTSAVDSKIRES----------------------------------------FGSKSESGVQNCLEPSISVFSSL  121 (126)
Q Consensus        82 lv~e~~~~~~L~~~~~~----------------------------------------~~~~~~~~~~~~~~qi~~~l~~l  121 (126)
                      +||||+++++|.+++..                                        ...+++..+..++.|++.|++||
T Consensus       105 lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~L  184 (345)
T 3hko_A          105 LVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSALHYL  184 (345)
T ss_dssp             EEEECCCSCBHHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHHHHHSCC--CEEECCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             EEEeCCCCCcHHHHHHHhhcccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHH
Confidence            99999999999988852                                        11246788899999999999999


Q ss_pred             hccCC
Q psy8006         122 SKFET  126 (126)
Q Consensus       122 ~~~~~  126 (126)
                      |+.++
T Consensus       185 H~~~i  189 (345)
T 3hko_A          185 HNQGI  189 (345)
T ss_dssp             HHTTE
T ss_pred             HHCCc
Confidence            98763

>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...

Probab=99.87  E-value=1.3e-21  Score=125.77  Aligned_cols=120  Identities=15%  Similarity=0.179  Sum_probs=102.2

Q ss_pred             cccccceeeccCccceeEEEEE----EccCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeC--
Q psy8006           4 IKNIISSIINDMGKYATVRRCR----DRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESS--   77 (126)
Q Consensus         4 ~~~~~~~~~lg~g~~~~v~~~~----~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~--   77 (126)
                      .++|...+.||+|+||.||+|.    +..++..+|+|.+....  ......+.+|+.++..++| |||+++++.+...  
T Consensus         9 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h-~~iv~~~~~~~~~~~   85 (295)
T 3ugc_A            9 ERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHST--EEHLRDFEREIEILKSLQH-DNIVKYKGVCYSAGR   85 (295)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEECTTCSSCCEEEEEEEESCCC--HHHHHHHHHHHHHHHTCCC-TTBCCEEEEECHHHH
T ss_pred             HHHhhhhheeeccCCEEEEEEEEecccCCCCcEEEEEEcccCC--HHHHHHHHHHHHHHHhCCC-CCEeeEEEEEecCCC
Confidence            3567788999999999999998    56788999999997542  3334568999999999998 9999999988543  


Q ss_pred             CeEEEEEeccCcccHHHHHHhc-CCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          78 HDMILLLELLTSAVDSKIRESF-GSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        78 ~~~~lv~e~~~~~~L~~~~~~~-~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      ...++||||+++++|.+++... ..+++..+..++.|++.|++|||+.++
T Consensus        86 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i  135 (295)
T 3ugc_A           86 RNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRY  135 (295)
T ss_dssp             TSCEEEEECCTTCBHHHHHHHCGGGCCHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred             CceEEEEEeCCCCCHHHHHHhcccccCHHHHHHHHHHHHHHHHHHhcCCc
Confidence            4589999999999999998764 359999999999999999999998764

>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...

Probab=99.87  E-value=4.9e-21  Score=126.80  Aligned_cols=118  Identities=14%  Similarity=0.138  Sum_probs=102.2

Q ss_pred             ccccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCC------
Q psy8006           5 KNIISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSH------   78 (126)
Q Consensus         5 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~------   78 (126)
                      .+|...+.||+|+||.||+|.+..++..+|+|.+............+.+|+.+++.++| |||+++++.+...+      
T Consensus        25 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h-pniv~~~~~~~~~~~~~~~~  103 (371)
T 2xrw_A           25 KRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNH-KNIIGLLNVFTPQKSLEEFQ  103 (371)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECTTSSHHHHHHHHHHHHHHHHCCC-TTBCCEEEEECSCCSTTTCC
T ss_pred             hheeEeeeeEecCCEEEEEEEECCCCceEEEEEeccccCChHHHHHHHHHHHHHHhcCC-CCccceEEeecccccccccc
Confidence            56778899999999999999999999999999998765444445568899999999998 99999999987654      


Q ss_pred             eEEEEEeccCcccHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          79 DMILLLELLTSAVDSKIRESFGSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        79 ~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      ..|+||||++++ |.+.+..  .+++..+..++.|++.|++|||+.++
T Consensus       104 ~~~lv~e~~~~~-l~~~~~~--~~~~~~~~~i~~qi~~al~~lH~~~i  148 (371)
T 2xrw_A          104 DVYIVMELMDAN-LCQVIQM--ELDHERMSYLLYQMLCGIKHLHSAGI  148 (371)
T ss_dssp             EEEEEEECCSEE-HHHHHHS--CCCHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred             ceEEEEEcCCCC-HHHHHhh--ccCHHHHHHHHHHHHHHHHHHHHCCe
Confidence            789999999876 7777753  58999999999999999999998764

>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*

Probab=99.87  E-value=3.2e-21  Score=124.62  Aligned_cols=120  Identities=11%  Similarity=0.049  Sum_probs=102.9

Q ss_pred             ccccceeeccCccceeEEEEEE-----ccCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHh-cCCCCceeeeeeeEeCC
Q psy8006           5 KNIISSIINDMGKYATVRRCRD-----RKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEAC-RCNSRIVQLHQVFESSH   78 (126)
Q Consensus         5 ~~~~~~~~lg~g~~~~v~~~~~-----~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~-~~~~~iv~l~~~~~~~~   78 (126)
                      ++|...+.||+|+||.||+|.+     ..++..+|+|.+..... ......+.+|+.++..+ +| |||+++++.+..++
T Consensus        23 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~~h-~~i~~~~~~~~~~~  100 (313)
T 1t46_A           23 NRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAH-LTEREALMSELKVLSYLGNH-MNIVNLLGACTIGG  100 (313)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCC-HHHHHHHHHHHHHHHHHCCC-TTBCCEEEEECSSS
T ss_pred             hhhhHHHhhCccCCcceEEEEEeeccccchhhhhHHHhcCcchh-HHHHHHHHHHHHHHhhcccC-CCeeeEEEEEecCC
Confidence            4677889999999999999985     45677899999986532 23345689999999999 66 99999999999999


Q ss_pred             eEEEEEeccCcccHHHHHHhcC------------------CCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          79 DMILLLELLTSAVDSKIRESFG------------------SKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        79 ~~~lv~e~~~~~~L~~~~~~~~------------------~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      ..++||||+++++|.+++....                  .+++..+..++.|++.|+.|||+.++
T Consensus       101 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i  166 (313)
T 1t46_A          101 PTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNC  166 (313)
T ss_dssp             SCEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred             CcEEEEecCCCCCHHHHHHhcccccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence            9999999999999999887543                  48999999999999999999998764

>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*

Probab=99.87  E-value=3.8e-21  Score=125.20  Aligned_cols=121  Identities=17%  Similarity=0.074  Sum_probs=99.4

Q ss_pred             cccccceeeccCccceeEEEEE-----EccCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCC
Q psy8006           4 IKNIISSIINDMGKYATVRRCR-----DRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSH   78 (126)
Q Consensus         4 ~~~~~~~~~lg~g~~~~v~~~~-----~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~   78 (126)
                      ..+|...+.||+|+||.||+|.     +..++..+|+|.+.... .......+.+|+.++..++| |||+++++.+....
T Consensus        29 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~h-~~iv~~~~~~~~~~  106 (327)
T 2yfx_A           29 RKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVC-SEQDELDFLMEALIISKFNH-QNIVRCIGVSLQSL  106 (327)
T ss_dssp             GGGCEEEEECC--CSSCEEEEEC--------CCEEEEEECCSSC-CHHHHHHHHHHHHHHHHCCC-TTBCCEEEEECSSS
T ss_pred             hhheEEEEEEcCCCCeeEEEEEEcCCCCCCccceEEEEEecccc-chhhHHHHHHHHHHHhhCCC-CCCCeEEEEEcCCC
Confidence            3567788999999999999998     55678899999997543 23334468899999999988 99999999999888


Q ss_pred             eEEEEEeccCcccHHHHHHhc-------CCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          79 DMILLLELLTSAVDSKIRESF-------GSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        79 ~~~lv~e~~~~~~L~~~~~~~-------~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      ..++||||+++++|.+++...       ..+++..+..++.|++.|+.|||+.++
T Consensus       107 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~i  161 (327)
T 2yfx_A          107 PRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHF  161 (327)
T ss_dssp             SCEEEEECCTTEEHHHHHHHTSCCSSSTTSCCHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred             CcEEEEecCCCCcHHHHHHhhcccccccccccHHHHHHHHHHHHHHHHHHhhCCe
Confidence            999999999999999998764       248899999999999999999998764

>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}

Probab=99.87  E-value=6.7e-21  Score=122.21  Aligned_cols=117  Identities=16%  Similarity=0.155  Sum_probs=100.4

Q ss_pred             ccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeEEEEEec
Q psy8006           7 IISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLLEL   86 (126)
Q Consensus         7 ~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~~lv~e~   86 (126)
                      +....+||+|+||.||+|.+..++..+|+|.+....  ......+.+|+.++..++| |||+++++.+...+..+++||+
T Consensus        24 ~~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~e~~~l~~l~h-~~iv~~~~~~~~~~~~~lv~e~  100 (295)
T 2clq_A           24 NGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERD--SRYSQPLHEEIALHKHLKH-KNIVQYLGSFSENGFIKIFMEQ  100 (295)
T ss_dssp             TSSBCEEEECSSSEEEEEEETTTCCEEEEEEEECCC--C---HHHHHHHHHHHTCCC-TTBCCEEEEEEETTEEEEEEEC
T ss_pred             CCCcEEEeecCcEEEEEEEECCCCeEEEEEEccCCc--hHHHHHHHHHHHHHHhCCC-CCEeeEeeEEEeCCcEEEEEEe
Confidence            344558999999999999999999999999997653  2334568899999999998 9999999999999999999999


Q ss_pred             cCcccHHHHHHhc---CCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          87 LTSAVDSKIRESF---GSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        87 ~~~~~L~~~~~~~---~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      +++++|.+++...   ..+++..+..++.|++.|++|||+.++
T Consensus       101 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i  143 (295)
T 2clq_A          101 VPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQI  143 (295)
T ss_dssp             CSEEEHHHHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred             CCCCCHHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhCCE
Confidence            9999999988764   256788999999999999999998763

>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...

Probab=99.87  E-value=4.2e-21  Score=125.39  Aligned_cols=120  Identities=10%  Similarity=0.125  Sum_probs=101.2

Q ss_pred             ccccceeeccCccceeEEEEEEc-------cCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHh-cCCCCceeeeeeeEe
Q psy8006           5 KNIISSIINDMGKYATVRRCRDR-------KNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEAC-RCNSRIVQLHQVFES   76 (126)
Q Consensus         5 ~~~~~~~~lg~g~~~~v~~~~~~-------~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~-~~~~~iv~l~~~~~~   76 (126)
                      ++|...+.||+|+||.||+|.+.       .++..+|+|.+..... ......+.+|+.++..+ +| |||+++++.+..
T Consensus        35 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~~h-p~iv~~~~~~~~  112 (334)
T 2pvf_A           35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDAT-EKDLSDLVSEMEMMKMIGKH-KNIINLLGACTQ  112 (334)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEETTCSTTCC---CEEEEEECCTTCC-HHHHHHHHHHHHHHHHHCCC-TTBCCEEEEECS
T ss_pred             hHeEEeeEEeecCceeEEEeEeccccccccccceEEEEeeeccCCc-HHHHHHHHHHHHHHHHhhcC-CCEeeEEEEEcc
Confidence            56778899999999999999975       4567899999976532 33345689999999999 56 999999999999


Q ss_pred             CCeEEEEEeccCcccHHHHHHhcC----------------CCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          77 SHDMILLLELLTSAVDSKIRESFG----------------SKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        77 ~~~~~lv~e~~~~~~L~~~~~~~~----------------~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      .+..++||||+++++|.+++....                .+++..+..++.|++.|++|||+.++
T Consensus       113 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~i  178 (334)
T 2pvf_A          113 DGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKC  178 (334)
T ss_dssp             SSCCEEEEECCTTCBHHHHHHTTSCTTCCSCC--------CCCHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred             CCceEEEEECCCCCcHHHHHHHhccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCCe
Confidence            999999999999999999987543                38999999999999999999998763

>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}

Probab=99.87  E-value=9.8e-21  Score=123.06  Aligned_cols=120  Identities=16%  Similarity=0.180  Sum_probs=103.1

Q ss_pred             cccccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEe------C
Q psy8006           4 IKNIISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFES------S   77 (126)
Q Consensus         4 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~------~   77 (126)
                      ...|...+.||+|+||.||+|.+..++..+|+|.+......   ...+.+|+.++.++.+||||+++++.+..      .
T Consensus        23 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~---~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~   99 (326)
T 2x7f_A           23 AGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDE---EEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMD   99 (326)
T ss_dssp             TTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSST---THHHHHHHHHHHHHCCSTTBCCEEEEEEECC--CCC
T ss_pred             CCcEEEEEEeccCCCEEEEEEEECCCCCeEEEEEEecCccc---HHHHHHHHHHHHhccCCCCeeeeeeEEeeccCcccc
Confidence            34577789999999999999999999999999999765322   34688999999999544999999999876      4


Q ss_pred             CeEEEEEeccCcccHHHHHHhc--CCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          78 HDMILLLELLTSAVDSKIRESF--GSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        78 ~~~~lv~e~~~~~~L~~~~~~~--~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      +..++||||+++++|.+++...  ..+++..+..++.|++.|+.|||+.++
T Consensus       100 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i  150 (326)
T 2x7f_A          100 DQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQHKV  150 (326)
T ss_dssp             CEEEEEEECCTTEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred             ceEEEEEEcCCCCcHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHCCc
Confidence            6799999999999999998753  479999999999999999999998764

>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}

Probab=99.87  E-value=7.3e-21  Score=123.08  Aligned_cols=117  Identities=15%  Similarity=0.239  Sum_probs=99.8

Q ss_pred             ccccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeEEEEE
Q psy8006           5 KNIISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLL   84 (126)
Q Consensus         5 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~~lv~   84 (126)
                      ..|...+.||+|+||.||.|.+..++..+|+|.+.....    ...+.+|+.++..++| ||++++++.+...+..+++|
T Consensus        29 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~----~~~~~~e~~~l~~l~h-~~i~~~~~~~~~~~~~~lv~  103 (314)
T 3com_A           29 EVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVESD----LQEIIKEISIMQQCDS-PHVVKYYGSYFKNTDLWIVM  103 (314)
T ss_dssp             -CEEEEEECC----CEEEEEEETTTCCEEEEEEEETTSC----CHHHHHHHHHHHTCCC-TTBCCEEEEEEETTEEEEEE
T ss_pred             hhhhhheeeccCCCeEEEEEEECCCCCEEEEEecCchHH----HHHHHHHHHHHHhCCC-CCCccEEEEEEeCCEEEEEe
Confidence            456678899999999999999999999999999986432    3368899999999998 99999999999999999999


Q ss_pred             eccCcccHHHHHH-hcCCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          85 ELLTSAVDSKIRE-SFGSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        85 e~~~~~~L~~~~~-~~~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      ||+++++|.+++. ....+++..+..++.|++.|+.|||+.++
T Consensus       104 e~~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i  146 (314)
T 3com_A          104 EYCGAGSVSDIIRLRNKTLTEDEIATILQSTLKGLEYLHFMRK  146 (314)
T ss_dssp             ECCTTEEHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred             ecCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCC
Confidence            9999999999886 35679999999999999999999998763

>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...

Probab=99.87  E-value=7.1e-21  Score=123.88  Aligned_cols=116  Identities=16%  Similarity=0.224  Sum_probs=102.3

Q ss_pred             ccccccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEe--CCeE
Q psy8006           3 NIKNIISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFES--SHDM   80 (126)
Q Consensus         3 ~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~--~~~~   80 (126)
                      +.++|...+.||+|+||.||+|.+..++..+|+|.+....     ...+.+|+.++..+++|||++++++.+..  ....
T Consensus        34 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-----~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~  108 (330)
T 3nsz_A           34 NQDDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVK-----KKKIKREIKILENLRGGPNIITLADIVKDPVSRTP  108 (330)
T ss_dssp             EGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSCC-----HHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCCE
T ss_pred             CCCceEEEEEecccCCeEEEEEEECCCCcEEEEEEecccc-----hHHHHHHHHHHHHcCCCCCEEEeeeeeccCCCCce
Confidence            4567888999999999999999999999999999987432     34688999999999844999999999987  5678


Q ss_pred             EEEEeccCcccHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          81 ILLLELLTSAVDSKIRESFGSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        81 ~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      +++||++++++|.++++.   +++..+..++.|++.|++|||+.++
T Consensus       109 ~lv~e~~~~~~l~~~~~~---~~~~~~~~~~~qi~~~l~~lH~~~i  151 (330)
T 3nsz_A          109 ALVFEHVNNTDFKQLYQT---LTDYDIRFYMYEILKALDYCHSMGI  151 (330)
T ss_dssp             EEEEECCCCCCHHHHGGG---CCHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred             EEEEeccCchhHHHHHHh---CCHHHHHHHHHHHHHHHHHHHhCCe
Confidence            999999999999888764   8999999999999999999998763

>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=99.87  E-value=5e-21  Score=121.27  Aligned_cols=118  Identities=15%  Similarity=0.086  Sum_probs=103.8

Q ss_pred             cccccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeEEEE
Q psy8006           4 IKNIISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILL   83 (126)
Q Consensus         4 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~~lv   83 (126)
                      .++|...+.||+|+||.||.+.+. ++..+|+|.+......   ...+.+|+.++..++| ||++++++.+..++..+++
T Consensus         7 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~~vaiK~~~~~~~~---~~~~~~e~~~l~~l~h-~~i~~~~~~~~~~~~~~lv   81 (267)
T 3t9t_A            7 PSELTFVQEIGSGQFGLVHLGYWL-NKDKVAIKTIREGAMS---EEDFIEEAEVMMKLSH-PKLVQLYGVCLEQAPICLV   81 (267)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEET-TTEEEEEEEECTTTBC---HHHHHHHHHHHHTCCC-TTBCCEEEEECSSSSCEEE
T ss_pred             hhheeeeeEecCCCceeEEEEEec-CCCeEEEEEccccCCC---HHHHHHHHHHHHhCCC-CCEeeEEEEEccCCCeEEE
Confidence            356788899999999999999986 5678999999875433   3468899999999998 9999999999988899999


Q ss_pred             EeccCcccHHHHHHhc-CCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          84 LELLTSAVDSKIRESF-GSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        84 ~e~~~~~~L~~~~~~~-~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      ||++++++|.+++... ..+++..+..++.|++.|++|||+.++
T Consensus        82 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i  125 (267)
T 3t9t_A           82 TEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACV  125 (267)
T ss_dssp             ECCCTTCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred             EeCCCCCcHHHHHhhCcccCCHHHHHHHHHHHHHHHHHHHhCCc
Confidence            9999999999988764 568999999999999999999998764

>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*

Probab=99.87  E-value=1.1e-20  Score=122.40  Aligned_cols=120  Identities=10%  Similarity=0.064  Sum_probs=105.1

Q ss_pred             ccccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcC-CCCceeeeeeeEeCCeEEEE
Q psy8006           5 KNIISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRC-NSRIVQLHQVFESSHDMILL   83 (126)
Q Consensus         5 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~-~~~iv~l~~~~~~~~~~~lv   83 (126)
                      ..|...+.||+|+||.||++.+. ++..+|+|.+............+.+|+.++.++++ +||++++++.+..++..+++
T Consensus        28 ~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~lv  106 (313)
T 3cek_A           28 RIYSILKQIGSGGSSKVFQVLNE-KKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMV  106 (313)
T ss_dssp             EEEEEEEEEECCSSEEEEEEECT-TCCEEEEEEEECSSCCHHHHHHHHHHHHHHHHHGGGCTTBCCEEEEEECSSEEEEE
T ss_pred             ceEEEEEEecCCCCEEEEEEEcC-CCcEEEEEEeccccccccchHHHHHHHHHHHhccccCCceEEEEEEeecCCEEEEE
Confidence            45778889999999999999885 48899999998766555555678999999999975 59999999999999999999


Q ss_pred             EeccCcccHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          84 LELLTSAVDSKIRESFGSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        84 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      || +.+++|.+++.....+++..+..++.|++.|+.|||+.++
T Consensus       107 ~e-~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~~i  148 (313)
T 3cek_A          107 ME-CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGI  148 (313)
T ss_dssp             EC-CCSEEHHHHHHHCSSCCHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred             Ee-cCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCc
Confidence            99 6677799999887889999999999999999999998764

>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7

Probab=99.87  E-value=3e-21  Score=126.35  Aligned_cols=120  Identities=14%  Similarity=0.072  Sum_probs=99.0

Q ss_pred             ccccceeeccCccceeEEEEEEc-----cCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHh-cCCCCceeeeeeeEeCC
Q psy8006           5 KNIISSIINDMGKYATVRRCRDR-----KNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEAC-RCNSRIVQLHQVFESSH   78 (126)
Q Consensus         5 ~~~~~~~~lg~g~~~~v~~~~~~-----~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~-~~~~~iv~l~~~~~~~~   78 (126)
                      ++|...+.||+|+||.||+|.+.     .++..+|+|.+..... ......+.+|+.++.++ +| |||+++++.+...+
T Consensus        45 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~~h-p~iv~~~~~~~~~~  122 (344)
T 1rjb_A           45 ENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKAD-SSEREALMSELKMMTQLGSH-ENIVNLLGACTLSG  122 (344)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC-------CHHHHHHHHHHHHHCCC-TTBCCEEEEECSSS
T ss_pred             HHceeeeeecCCCCceeEEeeeeccccCCcceEEEEEecccccC-HHHHHHHHHHHHHHHhhcCC-CCeeeEEEEEeeCC
Confidence            46677889999999999999973     3556899999975432 22334689999999999 66 99999999999999


Q ss_pred             eEEEEEeccCcccHHHHHHhcC-----------------------CCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          79 DMILLLELLTSAVDSKIRESFG-----------------------SKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        79 ~~~lv~e~~~~~~L~~~~~~~~-----------------------~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      ..++||||+++++|.+++....                       .+++..+..++.|++.|++|||+.++
T Consensus       123 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~i  193 (344)
T 1rjb_A          123 PIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKSC  193 (344)
T ss_dssp             SCEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred             ccEEEEecCCCCcHHHHHhhccccccccccchhhhcccccccccccCCHHHHHHHHHHHHHHHHHHHhCCc
Confidence            9999999999999999987542                       27899999999999999999998763

>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*

Probab=99.87  E-value=6e-21  Score=122.98  Aligned_cols=114  Identities=15%  Similarity=0.185  Sum_probs=96.5

Q ss_pred             cccc-eeeccCccceeEEEEEEccCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEe----CCeE
Q psy8006           6 NIIS-SIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFES----SHDM   80 (126)
Q Consensus         6 ~~~~-~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~----~~~~   80 (126)
                      +|.. .+.||+|+||.||.+.+..++..+|+|.+...       ....+|+.++.+...||||+++++.+..    ....
T Consensus        18 ~y~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-------~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~   90 (299)
T 3m2w_A           18 DYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC-------PKARREVELHWRASQCPHIVRIVDVYENLYAGRKCL   90 (299)
T ss_dssp             TEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECS-------HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEE
T ss_pred             chhhcCcccccCCCeEEEEEEEcCCCcEEEEEEeccc-------HHHHHHHHHHHHhccCCCchhHHhhhhhhcCCCceE
Confidence            3444 47899999999999999999999999999642       2567888888555444999999999876    6679


Q ss_pred             EEEEeccCcccHHHHHHhcC--CCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          81 ILLLELLTSAVDSKIRESFG--SKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        81 ~lv~e~~~~~~L~~~~~~~~--~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      ++||||+++++|.+++....  .+++..+..++.|++.|++|||+.++
T Consensus        91 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i  138 (299)
T 3m2w_A           91 LIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINI  138 (299)
T ss_dssp             EEEECCCCSCBHHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred             EEEEeecCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCc
Confidence            99999999999999987643  69999999999999999999998763

>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=99.87  E-value=5.3e-21  Score=125.00  Aligned_cols=119  Identities=14%  Similarity=0.191  Sum_probs=100.9

Q ss_pred             cccceeeccCccceeEEEEEEccCC----cEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeEE
Q psy8006           6 NIISSIINDMGKYATVRRCRDRKNG----TQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMI   81 (126)
Q Consensus         6 ~~~~~~~lg~g~~~~v~~~~~~~~~----~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~~   81 (126)
                      .|...+.||+|+||.||+|.+..++    ..+|+|.+.... .......+.+|+.++..++| |||+++++.+...+..+
T Consensus        45 ~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~h-~~iv~~~~~~~~~~~~~  122 (333)
T 1mqb_A           45 CVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGY-TEKQRVDFLGEAGIMGQFSH-HNIIRLEGVISKYKPMM  122 (333)
T ss_dssp             TEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTC-CHHHHHHHHHHHHHHHTCCC-TTBCCEEEEECSSSSEE
T ss_pred             HhhcccEEecCCCeEEEEEEEecCCCCccccEEEEEcCCCC-CHHHHHHHHHHHHHHHhCCC-CCCCcEEEEEecCCCcE
Confidence            4556789999999999999876543    359999997643 23334468999999999998 99999999999889999


Q ss_pred             EEEeccCcccHHHHHHhc-CCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          82 LLLELLTSAVDSKIRESF-GSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        82 lv~e~~~~~~L~~~~~~~-~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      +|||++++++|.+++... ..+++..+..++.|++.|++|||+.++
T Consensus       123 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~i  168 (333)
T 1mqb_A          123 IITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYLANMNY  168 (333)
T ss_dssp             EEEECCTTEEHHHHHHHTTTCSCHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred             EEEeCCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCe
Confidence            999999999999988764 579999999999999999999998764

>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A

Probab=99.87  E-value=6.7e-21  Score=122.37  Aligned_cols=118  Identities=14%  Similarity=0.176  Sum_probs=101.9

Q ss_pred             ccccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEe--------
Q psy8006           5 KNIISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFES--------   76 (126)
Q Consensus         5 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~--------   76 (126)
                      .+|...+.||+|+||.||.|.+..++..+|+|.+...   ......+.+|+.++..++| ||++++++.+..        
T Consensus         6 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~---~~~~~~~~~E~~~l~~l~h-~~i~~~~~~~~~~~~~~~~~   81 (303)
T 1zy4_A            6 SDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHT---EEKLSTILSEVMLLASLNH-QYVVRYYAAWLERRNFVKPM   81 (303)
T ss_dssp             HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEEE---HHHHHHHHHHHHHHTTCCC-TTBCCEEEEEEECCCCCC--
T ss_pred             ccchhhheeccCCcEEEEEEEEcCCCeEEEEEEEecc---HHHHHHHHHHHHHHHhcCc-hHHHHHHHHHHhhcchhhhh
Confidence            5677889999999999999999999999999999653   2334568899999999998 999999988754        


Q ss_pred             -----CCeEEEEEeccCcccHHHHHHhc-CCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          77 -----SHDMILLLELLTSAVDSKIRESF-GSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        77 -----~~~~~lv~e~~~~~~L~~~~~~~-~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                           .+..++|||++++++|.+++... ..+++..+..++.|++.|++|||+.++
T Consensus        82 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~i  137 (303)
T 1zy4_A           82 TAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYWRLFRQILEALSYIHSQGI  137 (303)
T ss_dssp             ----CEEEEEEEEECCCSCBHHHHHHHSCGGGCHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred             cccccCCceEEEEecCCCCCHHHhhhccccccchHHHHHHHHHHHHHHHHHHhCCe
Confidence                 45789999999999999999754 368889999999999999999998764

>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*

Probab=99.87  E-value=9.1e-21  Score=121.29  Aligned_cols=118  Identities=14%  Similarity=0.038  Sum_probs=101.2

Q ss_pred             ccccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCchhH-----HHHHHHHHHHHHhcCCCCceeeeeeeEeCCe
Q psy8006           5 KNIISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLK-----AEILHEVAVLEACRCNSRIVQLHQVFESSHD   79 (126)
Q Consensus         5 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~-----~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~   79 (126)
                      ++|...+.||+|+||.||+|.+..++..+|+|.+..........     +.+.+|+.++..++| |||+++++.+.... 
T Consensus        19 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h-~~i~~~~~~~~~~~-   96 (287)
T 4f0f_A           19 NEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNH-PNIVKLYGLMHNPP-   96 (287)
T ss_dssp             TTEEEEEECCCCSSSCEEEEEETTTCCEEEEEECCCCTTTCCHHHHCCSHHHHHHHHHHTTCCC-TTBCCEEEEETTTT-
T ss_pred             ccceehhccccCCceeEEEEEEcCCceEEEEEEeeccccccchhHHHHHHHHHHHHHHHHhCCC-CCchhhheeecCCC-
Confidence            56778899999999999999999999999999997654432221     568899999999998 99999999986554 


Q ss_pred             EEEEEeccCcccHHHHHHh-cCCCCHHHHHHHHHHHHHHHHhhhccC
Q psy8006          80 MILLLELLTSAVDSKIRES-FGSKSESGVQNCLEPSISVFSSLSKFE  125 (126)
Q Consensus        80 ~~lv~e~~~~~~L~~~~~~-~~~~~~~~~~~~~~qi~~~l~~l~~~~  125 (126)
                       +++|||+++++|.+.+.. ...+++..+..++.|++.|++|||+.+
T Consensus        97 -~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~  142 (287)
T 4f0f_A           97 -RMVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIEYMQNQN  142 (287)
T ss_dssp             -EEEEECCTTCBHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHHTSS
T ss_pred             -eEEEEecCCCCHHHHHhcccCCccHHHHHHHHHHHHHHHHHHHhCC
Confidence             689999999999777754 457999999999999999999999976

>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*

Probab=99.87  E-value=9.3e-22  Score=126.54  Aligned_cols=121  Identities=18%  Similarity=0.204  Sum_probs=88.9

Q ss_pred             cccccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeEEEE
Q psy8006           4 IKNIISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILL   83 (126)
Q Consensus         4 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~~lv   83 (126)
                      .++|...+.||+|+||.||.+.+..++..+|+|.+...... .....+.+|+.++..++| |||+++++.+...+..++|
T Consensus        14 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~e~~~l~~l~h-~~i~~~~~~~~~~~~~~lv   91 (303)
T 2vwi_A           14 RDDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQ-TSMDELLKEIQAMSQCHH-PNIVSYYTSFVVKDELWLV   91 (303)
T ss_dssp             CCCCEEEEECC---CCCEEEEEC----CEEEEECCC-----------------CCCCCCC-TTBCCEEEEEESSSCEEEE
T ss_pred             hhhhhhhheeccccceEEEEEEECCCCcEEEEEEEEhhhcc-hhHHHHHHHHHHHhhcCC-CCEeeEEEEEeecCCcEEE
Confidence            35678889999999999999999889999999998765322 223458899999999988 9999999999999999999


Q ss_pred             EeccCcccHHHHHHh--------cCCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          84 LELLTSAVDSKIRES--------FGSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        84 ~e~~~~~~L~~~~~~--------~~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      |||+++++|.+++..        ...+++..+..++.|++.|+.|||+.++
T Consensus        92 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i  142 (303)
T 2vwi_A           92 MKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNGQ  142 (303)
T ss_dssp             EECCTTCBHHHHHHHHHHTTTTTTCSSCHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred             ehhccCCchHHHHHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCC
Confidence            999999999988863        3469999999999999999999998764

>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A

Probab=99.87  E-value=7.7e-21  Score=121.66  Aligned_cols=121  Identities=15%  Similarity=0.164  Sum_probs=96.6

Q ss_pred             cccccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeEEEE
Q psy8006           4 IKNIISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILL   83 (126)
Q Consensus         4 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~~lv   83 (126)
                      .++|...+.||+|+||.||++.+..++..+|+|.+............+..+...+..++| ||++++++.+..++..++|
T Consensus         6 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h-~~iv~~~~~~~~~~~~~lv   84 (290)
T 3fme_A            6 ADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDC-PFTVTFYGALFREGDVWIC   84 (290)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEC---CHHHHHHHHHHHHHHHTTCCC-TTBCCEEEEEECSSSEEEE
T ss_pred             HHhhhhHHhcCCCCCeEEEEEEecCCCeEEEEEEeecccCcHHHHHHHHHHHHHHHhCCC-CeEEEEeeeeeccCCEEEE
Confidence            467888999999999999999999999999999997654333222234444445666777 9999999999999999999


Q ss_pred             EeccCcccHHHHHH----hcCCCCHHHHHHHHHHHHHHHHhhhcc-CC
Q psy8006          84 LELLTSAVDSKIRE----SFGSKSESGVQNCLEPSISVFSSLSKF-ET  126 (126)
Q Consensus        84 ~e~~~~~~L~~~~~----~~~~~~~~~~~~~~~qi~~~l~~l~~~-~~  126 (126)
                      |||+++ +|.+++.    ....+++..+..++.|++.|++|||+. ++
T Consensus        85 ~e~~~~-~l~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~i  131 (290)
T 3fme_A           85 MELMDT-SLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLSV  131 (290)
T ss_dssp             EECCSE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHSCC
T ss_pred             Eehhcc-chHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCe
Confidence            999986 4666554    346799999999999999999999985 53

>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*

Probab=99.87  E-value=6.3e-21  Score=123.40  Aligned_cols=121  Identities=13%  Similarity=0.079  Sum_probs=98.0

Q ss_pred             ccccceeeccCccceeEEEEEEcc---CCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCC---
Q psy8006           5 KNIISSIINDMGKYATVRRCRDRK---NGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSH---   78 (126)
Q Consensus         5 ~~~~~~~~lg~g~~~~v~~~~~~~---~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~---   78 (126)
                      ++|...+.||+|+||.||+|....   ++..+|+|.+............+.+|+.++..++| |||+++++++....   
T Consensus        34 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h-~~iv~~~~~~~~~~~~~  112 (313)
T 3brb_A           34 NLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSH-PNVIRLLGVCIEMSSQG  112 (313)
T ss_dssp             GGEEEEEEEEC-CCCCEEEEEEECTTSCEEEEEEEEC---CCCHHHHHHHHHHHHHHHTCCC-TTBCCCCEEEEC-----
T ss_pred             HHeeeccceeecCCeEEEEEEEeccCCceeEEEEEEEeccccchhHHHHHHHHHHHHhcCCC-CCeeeeeEEEeeccccC
Confidence            567788999999999999998764   45589999998765555545678999999999998 99999999987554   


Q ss_pred             --eEEEEEeccCcccHHHHHH------hcCCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          79 --DMILLLELLTSAVDSKIRE------SFGSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        79 --~~~lv~e~~~~~~L~~~~~------~~~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                        ..+++|||+++++|.+++.      ....+++..+..++.|++.|+.|||+.++
T Consensus       113 ~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~i  168 (313)
T 3brb_A          113 IPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLSNRNF  168 (313)
T ss_dssp             --CEEEEEECCTTCBHHHHHHHTTBTTSCCCCCHHHHHHHHHHHHHHHHHHHTTTC
T ss_pred             CcccEEEEecccCCCHHHHHHHhhhhcCCccCCHHHHHHHHHHHHHHHHHHHhCCc
Confidence              3599999999999998884      23469999999999999999999998764

>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A

Probab=99.86  E-value=6e-21  Score=129.23  Aligned_cols=116  Identities=17%  Similarity=0.162  Sum_probs=99.7

Q ss_pred             cccccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCC-eEEE
Q psy8006           4 IKNIISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSH-DMIL   82 (126)
Q Consensus         4 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~-~~~l   82 (126)
                      .++|...+.||+|+||.||++...  +..+|+|.+....    ..+.+.+|+.++.+++| |||+++++.+.... ..++
T Consensus       192 ~~~~~~~~~lG~G~fg~V~~~~~~--~~~vavK~~~~~~----~~~~~~~E~~~l~~l~h-~niv~~~~~~~~~~~~~~i  264 (450)
T 1k9a_A          192 MKELKLLQTIGKGEFGDVMLGDYR--GNKVAVKCIKNDA----TAQAFLAEASVMTQLRH-SNLVQLLGVIVEEKGGLYI  264 (450)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEET--TEEEEEEEESSCT----TSHHHHHHHHHHHTCCC-TTBCCEEEEEECTTSCEEE
T ss_pred             hHHeEEEeeecCcCCeeEEEEEec--CCeEEEEEeCCch----HHHHHHHHHHHHHhccC-CCEEEEEEEEEcCCCceEE
Confidence            456777889999999999999875  6789999997643    23468999999999998 99999999987655 7999


Q ss_pred             EEeccCcccHHHHHHhcC--CCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          83 LLELLTSAVDSKIRESFG--SKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        83 v~e~~~~~~L~~~~~~~~--~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      ||||+++++|.+++...+  .+++..+..++.|++.|++|||+.++
T Consensus       265 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~i  310 (450)
T 1k9a_A          265 VTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNF  310 (450)
T ss_dssp             EEECCTTCBHHHHHHHHCTTTCCHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred             EEEecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCe
Confidence            999999999999987654  37999999999999999999998763

>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*

Probab=99.86  E-value=7.7e-21  Score=123.77  Aligned_cols=120  Identities=18%  Similarity=0.189  Sum_probs=102.7

Q ss_pred             cccccceeeccCccceeEEEEE----EccCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeE--eC
Q psy8006           4 IKNIISSIINDMGKYATVRRCR----DRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFE--SS   77 (126)
Q Consensus         4 ~~~~~~~~~lg~g~~~~v~~~~----~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~--~~   77 (126)
                      .++|...+.||+|+||.||++.    +..++..+|+|.+....  ......+.+|+.++..++| |||+++++.+.  ..
T Consensus        22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h-~~i~~~~~~~~~~~~   98 (327)
T 3lxl_A           22 ERHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSG--PDQQRDFQREIQILKALHS-DFIVKYRGVSYGPGR   98 (327)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEECTTSSSCSEEEEEEEESSCC--HHHHHHHHHHHHHHHTCCC-TTBCCEEEEEECSSS
T ss_pred             hhhhhhhhhccCCCCeEEEEEEeccCCCCcceEEEEEEeccCC--HHHHHHHHHHHHHHHhcCC-CceeEEEEEEecCCC
Confidence            3567788999999999999998    56788899999997642  3334568999999999988 99999999886  45


Q ss_pred             CeEEEEEeccCcccHHHHHHh-cCCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          78 HDMILLLELLTSAVDSKIRES-FGSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        78 ~~~~lv~e~~~~~~L~~~~~~-~~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      ...++||||+++++|.+++.. ...+++..+..++.|++.|++|||+.++
T Consensus        99 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~~i  148 (327)
T 3lxl_A           99 QSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGSRRC  148 (327)
T ss_dssp             CEEEEEEECCTTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred             ceEEEEEeecCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCc
Confidence            578999999999999999876 4569999999999999999999998763

>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}

Probab=99.86  E-value=9.9e-21  Score=124.61  Aligned_cols=117  Identities=18%  Similarity=0.191  Sum_probs=101.6

Q ss_pred             ccccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhc-----CCCCceeeeeeeEeCCe
Q psy8006           5 KNIISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACR-----CNSRIVQLHQVFESSHD   79 (126)
Q Consensus         5 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~-----~~~~iv~l~~~~~~~~~   79 (126)
                      ++|...+.||+|+||.||+|.+..++..+|+|.+...   ........+|+.++..++     | |||+++++.+...+.
T Consensus        35 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~~~e~~~l~~l~~~~~~h-~~iv~~~~~~~~~~~  110 (360)
T 3llt_A           35 NAFLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRNI---KKYTRSAKIEADILKKIQNDDINN-NNIVKYHGKFMYYDH  110 (360)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSC---HHHHHHHHHHHHHHHHTCCCSTTG-GGBCCEEEEEEETTE
T ss_pred             CEEEEEEEEcccCCeEEEEEEECCCCeEEEEEEeccc---hhhhhhhHHHHHHHHHhcccCCCC-CCeecccceeeECCe
Confidence            4577889999999999999999999999999999743   223345788999999987     5 999999999999999


Q ss_pred             EEEEEeccCcccHHHHHHhcC--CCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          80 MILLLELLTSAVDSKIRESFG--SKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        80 ~~lv~e~~~~~~L~~~~~~~~--~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      .++|||++ +++|.+++....  .+++..+..++.|++.||+|||+.++
T Consensus       111 ~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~i  158 (360)
T 3llt_A          111 MCLIFEPL-GPSLYEIITRNNYNGFHIEDIKLYCIEILKALNYLRKMSL  158 (360)
T ss_dssp             EEEEECCC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred             eEEEEcCC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence            99999999 777988887643  59999999999999999999998763

>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}

Probab=99.86  E-value=3.5e-21  Score=127.14  Aligned_cols=116  Identities=13%  Similarity=0.090  Sum_probs=97.1

Q ss_pred             ccccceeeccCccceeEEEE-----EEccCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhc---CCCCceeeeeeeEe
Q psy8006           5 KNIISSIINDMGKYATVRRC-----RDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACR---CNSRIVQLHQVFES   76 (126)
Q Consensus         5 ~~~~~~~~lg~g~~~~v~~~-----~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~---~~~~iv~l~~~~~~   76 (126)
                      .+|...+.||+|+||.||+|     .+..++..+|+|.+....     ...+.+|..++..+.   | ++++.+++.+..
T Consensus        65 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~-----~~~~~~e~~~~~~l~~~~~-~~iv~~~~~~~~  138 (365)
T 3e7e_A           65 KLVYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPAN-----PWEFYIGTQLMERLKPSMQ-HMFMKFYSAHLF  138 (365)
T ss_dssp             SEEEEEEEEEECSSEEEEEEEC-------CCCCEEEEEESSCC-----HHHHHHHHHHHHHSCGGGG-GGBCCEEEEEEC
T ss_pred             EEEEEEEEeeccCCEEEEEEEecCCcccccCcEEEEEEeCCCC-----hhHHHHHHHHHHHhhhhhh-hhhhhhheeeec
Confidence            45677889999999999999     467788999999997542     335777888888776   5 999999999999


Q ss_pred             CCeEEEEEeccCcccHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          77 SHDMILLLELLTSAVDSKIRES-----FGSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        77 ~~~~~lv~e~~~~~~L~~~~~~-----~~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      ++..++||||+++++|.+++..     ...+++..+..++.|++.|++|||+.++
T Consensus       139 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~i  193 (365)
T 3e7e_A          139 QNGSVLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVHDCEI  193 (365)
T ss_dssp             SSCEEEEECCCCSCBHHHHHHHHHTSTTCSCCHHHHHHHHHHHHHHHHHHHTTTE
T ss_pred             CCCcEEEEeccCCCcHHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHhhCCe
Confidence            9999999999999999998863     3579999999999999999999998763

>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*

Probab=99.86  E-value=8.4e-21  Score=121.10  Aligned_cols=115  Identities=12%  Similarity=0.143  Sum_probs=99.8

Q ss_pred             ccccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEe--------
Q psy8006           5 KNIISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFES--------   76 (126)
Q Consensus         5 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~--------   76 (126)
                      .+|...+.||+|+||.||++.+..++..+|+|.+....      ..+.+|+.++..++| ||++++++.+..        
T Consensus        11 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~------~~~~~e~~~l~~l~h-~~i~~~~~~~~~~~~~~~~~   83 (284)
T 2a19_B           11 MDFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNN------EKAEREVKALAKLDH-VNIVHYNGCWDGFDYDPETS   83 (284)
T ss_dssp             HHEEEEEEEECSSSCCEEEEEETTTCCEEEEEEEECCS------GGGHHHHHHHHHCCC-TTBCCEEEEEEEEEEC----
T ss_pred             cccceeeeeccCCceEEEEEEEcCCCeEEEEEEecccc------HHHHHHHHHHHhCCC-CCEEEEeeeEeccccCcccc
Confidence            35777899999999999999999999999999997643      146789999999998 999999998754        


Q ss_pred             --------CCeEEEEEeccCcccHHHHHHhc--CCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          77 --------SHDMILLLELLTSAVDSKIRESF--GSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        77 --------~~~~~lv~e~~~~~~L~~~~~~~--~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                              ....+++|||+++++|.+++...  ..+++..+..++.|++.|+.|||+.++
T Consensus        84 ~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i  143 (284)
T 2a19_B           84 SKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIHSKKL  143 (284)
T ss_dssp             -----CCEEEEEEEEECCCCSCBHHHHHHHGGGSCCCHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred             cccccccCcceEEEEEeccCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhCCe
Confidence                    44589999999999999998653  579999999999999999999998763

>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0

Probab=99.86  E-value=6.4e-21  Score=121.07  Aligned_cols=118  Identities=14%  Similarity=0.130  Sum_probs=97.7

Q ss_pred             cccccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCc--hhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeEE
Q psy8006           4 IKNIISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRST--DLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMI   81 (126)
Q Consensus         4 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~--~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~~   81 (126)
                      ..+|...+.||+|+||.||++.+.  +..+|+|.+.......  .....+.+|+.++..++| |||+++++.+..++..+
T Consensus         6 ~~~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h-~~i~~~~~~~~~~~~~~   82 (271)
T 3dtc_A            6 FAELTLEEIIGIGGFGKVYRAFWI--GDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKH-PNIIALRGVCLKEPNLC   82 (271)
T ss_dssp             TTSEEEEEEEEEETTEEEEEEEET--TEEEEEEEC----------CHHHHHHHHHHHHHCCC-TTBCCEEEEECCC--CE
T ss_pred             hhheeeeeeeccCCCeEEEEEEEc--CCeEEEEEEecCCcccHHHHHHHHHHHHHHHHhcCC-CCEeeEEEEEecCCceE
Confidence            567888999999999999999874  7889999987654322  223568899999999998 99999999999999999


Q ss_pred             EEEeccCcccHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhhccC
Q psy8006          82 LLLELLTSAVDSKIRESFGSKSESGVQNCLEPSISVFSSLSKFE  125 (126)
Q Consensus        82 lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~l~~~~  125 (126)
                      +||||+++++|.+++.. ..+++..+..++.|++.|++|||+.+
T Consensus        83 lv~e~~~~~~L~~~~~~-~~~~~~~~~~i~~~l~~~l~~lH~~~  125 (271)
T 3dtc_A           83 LVMEFARGGPLNRVLSG-KRIPPDILVNWAVQIARGMNYLHDEA  125 (271)
T ss_dssp             EEEECCTTEEHHHHHTS-SCCCHHHHHHHHHHHHHHHHHHHHSS
T ss_pred             EEEEcCCCCCHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            99999999999888864 57999999999999999999999876

>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...

Probab=99.86  E-value=6.2e-21  Score=123.38  Aligned_cols=121  Identities=11%  Similarity=0.047  Sum_probs=101.4

Q ss_pred             ccccceeeccCccceeEEEEEE-----ccCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCC-
Q psy8006           5 KNIISSIINDMGKYATVRRCRD-----RKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSH-   78 (126)
Q Consensus         5 ~~~~~~~~lg~g~~~~v~~~~~-----~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~-   78 (126)
                      ++|...+.||+|+||.||+|.+     ..++..+|+|.+..... ......+.+|+.++..+.+||||+++++.+..++ 
T Consensus        27 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~  105 (316)
T 2xir_A           27 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGAT-HSEHRALMSELKILIHIGHHLNVVNLLGACTKPGG  105 (316)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCC-HHHHHHHHHHHHHHHHHCCCTTBCCEEEEECCTTS
T ss_pred             hheeeeeEEcCCCceeEEEEEEecCCccccceEEEEEecccCCC-cHHHHHHHHHHHHHHhcccCCCeeeEEEEEecCCC
Confidence            4677889999999999999985     35667899999976542 2334468999999999965599999999987654 


Q ss_pred             eEEEEEeccCcccHHHHHHhcCC----------------CCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          79 DMILLLELLTSAVDSKIRESFGS----------------KSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        79 ~~~lv~e~~~~~~L~~~~~~~~~----------------~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      ..+++|||+++++|.+++.....                +++..+..++.|++.|+.|||+.++
T Consensus       106 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i  169 (316)
T 2xir_A          106 PLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKC  169 (316)
T ss_dssp             CCEEEEECCTTEEHHHHHHTCTTSEECC-------CTTCEEHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred             ceEEEEEcCCCCcHHHHHHhcccccccccccchhhhccccCHHHHHHHHHHHHHHHHHHHhCCc
Confidence            58999999999999999976443                8999999999999999999998764

>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*

Probab=99.86  E-value=1.2e-20  Score=123.00  Aligned_cols=120  Identities=13%  Similarity=0.131  Sum_probs=102.0

Q ss_pred             ccccceeeccCccceeEEEEEEccCCc-----EEEEEEeecCCCCchhHHHHHHHHHHHHHh-cCCCCceeeeeeeEeCC
Q psy8006           5 KNIISSIINDMGKYATVRRCRDRKNGT-----QYAAKFLRKKRRSTDLKAEILHEVAVLEAC-RCNSRIVQLHQVFESSH   78 (126)
Q Consensus         5 ~~~~~~~~lg~g~~~~v~~~~~~~~~~-----~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~-~~~~~iv~l~~~~~~~~   78 (126)
                      ++|...+.||+|+||.||.|.+..++.     .+|+|.+..... ......+.+|+.++..+ +| |||+++++.+..++
T Consensus        46 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~~h-~~iv~~~~~~~~~~  123 (333)
T 2i1m_A           46 NNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAH-ADEKEALMSELKIMSHLGQH-ENIVNLLGACTHGG  123 (333)
T ss_dssp             TSEEEEEEEEECSSEEEEEEEETTCSSSCCCCEEEEEEECTTCC-HHHHHHHHHHHHHHHHHCCC-TTBCCEEEEECSSS
T ss_pred             HHceeeeEeccCCCcceEEEEecCCCcccchhHHHHHhcccccC-hHHHHHHHHHHHHHHhhcCC-CCeeeEEEEEecCC
Confidence            456778899999999999999876654     799999976542 23345689999999999 66 99999999999999


Q ss_pred             eEEEEEeccCcccHHHHHHhc--------------CCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          79 DMILLLELLTSAVDSKIRESF--------------GSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        79 ~~~lv~e~~~~~~L~~~~~~~--------------~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      ..++||||+++++|.+++...              ..+++..+..++.|++.|++|||+.++
T Consensus       124 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i  185 (333)
T 2i1m_A          124 PVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLASKNC  185 (333)
T ss_dssp             SCEEEEECCTTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred             ceEEEEecCCCCcHHHHHHHhcccccccccccccccccCHHHHHHHHHHHHHHHHHHhcCCc
Confidence            999999999999999888642              357999999999999999999998763

>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}

Probab=99.86  E-value=7.3e-22  Score=128.60  Aligned_cols=120  Identities=18%  Similarity=0.199  Sum_probs=99.8

Q ss_pred             cccccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeEEEE
Q psy8006           4 IKNIISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILL   83 (126)
Q Consensus         4 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~~lv   83 (126)
                      +++|...+.||+|+||.||+|.+..++..+|+|.+....... ....+.+|+.++..++| |||+++++++...+..++|
T Consensus         1 l~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~-~~~~~~~E~~~l~~l~h-~~iv~~~~~~~~~~~~~lv   78 (324)
T 3mtl_A            1 METYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEG-APCTAIREVSLLKDLKH-ANIVTLHDIIHTEKSLTLV   78 (324)
T ss_dssp             CCSEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECC-------CCCCCCCHHHHSCCCC-TTBCCEEEEEECSSCEEEE
T ss_pred             CCceEEEEEEcCCCCEEEEEEEECCCCcEEEEEEEecccccc-cchhHHHHHHHHHhcCC-CCCCeeeeEEeeCCEEEEE
Confidence            457888999999999999999999999999999997543211 11134579999999998 9999999999999999999


Q ss_pred             EeccCcccHHHHHHh-cCCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          84 LELLTSAVDSKIRES-FGSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        84 ~e~~~~~~L~~~~~~-~~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      |||+++ +|.+++.. ...+++..+..++.|++.|+.|||+.++
T Consensus        79 ~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~i  121 (324)
T 3mtl_A           79 FEYLDK-DLKQYLDDCGNIINMHNVKLFLFQLLRGLAYCHRQKV  121 (324)
T ss_dssp             EECCSE-EHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred             eccccc-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCc
Confidence            999996 47777765 3469999999999999999999998763

>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...

Probab=99.86  E-value=4e-21  Score=127.18  Aligned_cols=119  Identities=18%  Similarity=0.206  Sum_probs=94.6

Q ss_pred             ccccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeC------C
Q psy8006           5 KNIISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESS------H   78 (126)
Q Consensus         5 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~------~   78 (126)
                      ..|...+.||+|+||.||+|.+..++..+|+|.+............+.+|+.+++.++| |||+++++.+...      .
T Consensus        29 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h-pnIv~~~~~~~~~~~~~~~~  107 (367)
T 2fst_X           29 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKH-ENVIGLLDVFTPARSLEEFN  107 (367)
T ss_dssp             TTEEEEEECC----CCEEEEEETTTTEEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCC-TTBCCCSEEECSCSSGGGCC
T ss_pred             CceEEeeEEeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCC-CCCCcEEEEEecCCccccCC
Confidence            45777889999999999999999999999999997655444445568899999999998 9999999998654      4


Q ss_pred             eEEEEEeccCcccHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          79 DMILLLELLTSAVDSKIRESFGSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        79 ~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      ..|+++|++ +++|.++++. ..+++..+..++.|++.|++|||+.++
T Consensus       108 ~~~lv~e~~-~~~L~~~~~~-~~l~~~~~~~i~~qi~~aL~~LH~~gi  153 (367)
T 2fst_X          108 DVYLVTHLM-GADLNNIVKC-QKLTDDHVQFLIYQILRGLKYIHSADI  153 (367)
T ss_dssp             CCEEEEECC-CEECC------CCCCHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred             eEEEEeccc-CCCHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence            689999998 4668888875 569999999999999999999998764

>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A

Probab=99.86  E-value=6.8e-21  Score=126.10  Aligned_cols=118  Identities=19%  Similarity=0.245  Sum_probs=101.9

Q ss_pred             ccccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeE----
Q psy8006           5 KNIISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDM----   80 (126)
Q Consensus         5 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~----   80 (126)
                      ++|...+.||+|+||.||+|.+..++..+|+|.+............+.+|+.++..++| |||+++++++...+..    
T Consensus        42 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h-~niv~~~~~~~~~~~~~~~~  120 (371)
T 4exu_A           42 KTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQH-ENVIGLLDVFTPASSLRNFY  120 (371)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCC-TTBCCCSEEECSCSSSTTCC
T ss_pred             ccEEEEeEEecCCCeEEEEEEECCCCCEEEEEEecccccchhHHHHHHHHHHHHHhcCC-CCchhhhhheeccCCcccce
Confidence            45777889999999999999999999999999998765544445678999999999998 9999999999876654    


Q ss_pred             --EEEEeccCcccHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          81 --ILLLELLTSAVDSKIRESFGSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        81 --~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                        ++|||++++ +|.+++..  .+++..+..++.|++.|++|||+.++
T Consensus       121 ~~~lv~e~~~~-~l~~~~~~--~~~~~~~~~i~~qi~~aL~~LH~~~i  165 (371)
T 4exu_A          121 DFYLVMPFMQT-DLQKIMGM--EFSEEKIQYLVYQMLKGLKYIHSAGV  165 (371)
T ss_dssp             CCEEEEECCCE-EHHHHTTS--CCCHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred             eEEEEEccccc-cHHHHhhc--CCCHHHHHHHHHHHHHHHHHHHHCCC
Confidence              999999996 47777643  58999999999999999999998764

>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A

Probab=99.86  E-value=2.4e-22  Score=131.35  Aligned_cols=120  Identities=14%  Similarity=0.158  Sum_probs=94.1

Q ss_pred             cccccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCC------chhHHHHHHHHHHHHHhc--------CCCCcee
Q psy8006           4 IKNIISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRS------TDLKAEILHEVAVLEACR--------CNSRIVQ   69 (126)
Q Consensus         4 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~------~~~~~~~~~e~~~l~~~~--------~~~~iv~   69 (126)
                      ..+|...+.||+|+||.||+|.+  ++..||+|.+......      ......+.+|+.+++.++        .|||+++
T Consensus        19 ~~~y~~~~~lG~G~~g~V~~~~~--~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~~~~~~~h~niv~   96 (336)
T 2vuw_A           19 TEKLQRCEKIGEGVFGEVFQTIA--DHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSGEVCNRTEGFIG   96 (336)
T ss_dssp             HHHHHTCEEEEEETTEEEEEEEE--TTEEEEEEEEEESCSSCBTTBCCBCHHHHHHHHHHHHHHHHGGGCSSSBCCCBCC
T ss_pred             cccchheeeecccCceEEEEEEe--CCceEEEEEEecCCccccccccchhHHHHHHHHHHHHHHHHhhccccccCCchhh
Confidence            35677889999999999999988  6799999999876432      223457889999999887        1266666


Q ss_pred             eeeee-----------------Ee-------------CCeEEEEEeccCcccHHHHHHhcCCCCHHHHHHHHHHHHHHHH
Q psy8006          70 LHQVF-----------------ES-------------SHDMILLLELLTSAVDSKIRESFGSKSESGVQNCLEPSISVFS  119 (126)
Q Consensus        70 l~~~~-----------------~~-------------~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~  119 (126)
                      +.+.+                 ..             .+..|+||||+++|++.+.+.. ..+++..++.++.|++.|++
T Consensus        97 l~~~~~~~~~~hp~iv~~~~~~~~~~~~~~~~~~~~~~~~~~lv~E~~~~g~ll~~~~~-~~~~~~~~~~i~~qi~~aL~  175 (336)
T 2vuw_A           97 LNSVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEFGGIDLEQMRT-KLSSLATAKSILHQLTASLA  175 (336)
T ss_dssp             EEEEEEEESSCCHHHHHHHHHHHHHTCCSSCCSCCCCTTCEEEEEEEECCCEETGGGTT-TCCCHHHHHHHHHHHHHHHH
T ss_pred             hcceeEecCCCcHHHHHHHHHHhhhccccccCccccccCeEEEEEEecCCCccHHHHHh-cCCCHHHHHHHHHHHHHHHH
Confidence            65543                 22             6789999999999866554443 56899999999999999999


Q ss_pred             hhh-ccCC
Q psy8006         120 SLS-KFET  126 (126)
Q Consensus       120 ~l~-~~~~  126 (126)
                      ||| +.++
T Consensus       176 ~lH~~~~i  183 (336)
T 2vuw_A          176 VAEASLRF  183 (336)
T ss_dssp             HHHHHHCC
T ss_pred             HHHHhCCE
Confidence            999 7654

>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}

Probab=99.86  E-value=1.9e-20  Score=120.94  Aligned_cols=120  Identities=18%  Similarity=0.191  Sum_probs=98.5

Q ss_pred             ccccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCC---chhHHHHHHHHHHHHHhc---CCCCceeeeeeeEeCC
Q psy8006           5 KNIISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRS---TDLKAEILHEVAVLEACR---CNSRIVQLHQVFESSH   78 (126)
Q Consensus         5 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~---~~~~~~~~~e~~~l~~~~---~~~~iv~l~~~~~~~~   78 (126)
                      ++|...+.||+|+||.||+|.+..++..+|+|.+......   ........+|+.++..++   | |||+++++.+....
T Consensus         9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h-~niv~~~~~~~~~~   87 (308)
T 3g33_A            9 SRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEH-PNVVRLMDVCATSR   87 (308)
T ss_dssp             -CCEEEEEECCSSSCCEEEEECTTTCCEEEEEEEEEECCCTTSSCCCHHHHHHHHHHHHHHHHCC-TTBCCEEEEEEECC
T ss_pred             cceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEecccccccccccchhHHHHHHHHHHHhhcCC-CCeEEeeeeeeccC
Confidence            5678889999999999999999999999999999854321   112235677888777775   7 99999999987654


Q ss_pred             -----eEEEEEeccCcccHHHHHHhcC--CCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          79 -----DMILLLELLTSAVDSKIRESFG--SKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        79 -----~~~lv~e~~~~~~L~~~~~~~~--~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                           ..+++||++++ +|.+++....  .+++..+..++.|++.|++|||+.++
T Consensus        88 ~~~~~~~~lv~e~~~~-~L~~~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~i  141 (308)
T 3g33_A           88 TDREIKVTLVFEHVDQ-DLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLHANCI  141 (308)
T ss_dssp             SSSEEEEEEEEECCCC-BHHHHHHTCCTTCSCHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred             CCCceeEEEEehhhhc-CHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHCCc
Confidence                 58999999986 6888887654  39999999999999999999998764

>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}

Probab=99.86  E-value=1.4e-20  Score=125.05  Aligned_cols=115  Identities=14%  Similarity=0.145  Sum_probs=95.2

Q ss_pred             cccccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeC------
Q psy8006           4 IKNIISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESS------   77 (126)
Q Consensus         4 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~------   77 (126)
                      ..+|...+.||+|+||.||+|.+..++..||+|.+......      ..+|+.+++.++| |||+++++++...      
T Consensus         6 ~~~y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~~------~~~E~~il~~l~h-pnIv~l~~~~~~~~~~~~~   78 (383)
T 3eb0_A            6 SKKYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDPRY------KNRELDIMKVLDH-VNIIKLVDYFYTTGDEEPK   78 (383)
T ss_dssp             CTTEEEEEEEECC-CEEEEEEEETTTCCEEEEEEEECCTTS------CCHHHHHHTTCCC-TTBCCEEEEEEEC------
T ss_pred             cceEEEEEEEEeccCEEEEEEEECCCCCEEEEEEEecCcch------HHHHHHHHHHcCC-CCccchhheeeecCccccc
Confidence            35688899999999999999999999999999999765322      2379999999998 9999999988432      


Q ss_pred             --------------------------------CeEEEEEeccCcccHHHHHH----hcCCCCHHHHHHHHHHHHHHHHhh
Q psy8006          78 --------------------------------HDMILLLELLTSAVDSKIRE----SFGSKSESGVQNCLEPSISVFSSL  121 (126)
Q Consensus        78 --------------------------------~~~~lv~e~~~~~~L~~~~~----~~~~~~~~~~~~~~~qi~~~l~~l  121 (126)
                                                      .+.++||||++++ |.+.+.    .+..+++..+..++.|++.|++||
T Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~-L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~L  157 (383)
T 3eb0_A           79 PPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVPDT-LHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFI  157 (383)
T ss_dssp             -------------------------------CCEEEEEECCCSEE-HHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHH
T ss_pred             ccccccccccccccccccccccccccccCCCceEEEEEEecCCcc-HHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHH
Confidence                                            3488999999964 655543    456799999999999999999999


Q ss_pred             hccCC
Q psy8006         122 SKFET  126 (126)
Q Consensus       122 ~~~~~  126 (126)
                      |+.++
T Consensus       158 H~~gi  162 (383)
T 3eb0_A          158 HSLGI  162 (383)
T ss_dssp             HTTTE
T ss_pred             HHCcC
Confidence            98763

>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*

Probab=99.86  E-value=1.3e-20  Score=122.58  Aligned_cols=114  Identities=13%  Similarity=0.055  Sum_probs=96.9

Q ss_pred             cccccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCC----e
Q psy8006           4 IKNIISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSH----D   79 (126)
Q Consensus         4 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~----~   79 (126)
                      ..+|...+.||+|+||.||+|.+.  +..||+|.+....   .......+|+.++.+++| |||+++++.+....    .
T Consensus        23 ~~~y~~~~~lg~G~~g~Vy~~~~~--~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~h-pniv~~~~~~~~~~~~~~~   96 (322)
T 3soc_A           23 SMPLQLLEVKARGRFGCVWKAQLL--NEYVAVKIFPIQD---KQSWQNEYEVYSLPGMKH-ENILQFIGAEKRGTSVDVD   96 (322)
T ss_dssp             TEEEEEEEEEECSTTCEEEEEEET--TEEEEEEEECGGG---HHHHHHHHHHHTSTTCCC-TTBCCEEEEEEEECSSSEE
T ss_pred             hhhchhhheecccCceEEEEEEEC--CCEEEEEEeecCc---hHHHHHHHHHHHHhcCCC-CCchhhcceeccCCCCCce
Confidence            356788899999999999999875  7899999996542   223346678888999998 99999999987643    4


Q ss_pred             EEEEEeccCcccHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhhcc
Q psy8006          80 MILLLELLTSAVDSKIRESFGSKSESGVQNCLEPSISVFSSLSKF  124 (126)
Q Consensus        80 ~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~l~~~  124 (126)
                      .++||||+++++|.++++. ..+++..+..++.|++.|++|||+.
T Consensus        97 ~~lv~e~~~~g~L~~~l~~-~~~~~~~~~~i~~qi~~al~~LH~~  140 (322)
T 3soc_A           97 LWLITAFHEKGSLSDFLKA-NVVSWNELCHIAETMARGLAYLHED  140 (322)
T ss_dssp             EEEEEECCTTCBHHHHHHH-CCBCHHHHHHHHHHHHHHHHHHTCC
T ss_pred             EEEEEecCCCCCHHHHHHh-cCCCHHHHHHHHHHHHHHHHHHHhh
Confidence            7999999999999999976 4599999999999999999999986

>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*

Probab=99.85  E-value=1.2e-21  Score=128.38  Aligned_cols=119  Identities=11%  Similarity=0.156  Sum_probs=103.2

Q ss_pred             cccccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCch---------------hHHHHHHHHHHHHHhcCCCCce
Q psy8006           4 IKNIISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTD---------------LKAEILHEVAVLEACRCNSRIV   68 (126)
Q Consensus         4 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~---------------~~~~~~~e~~~l~~~~~~~~iv   68 (126)
                      +.+|...+.||+|+||.||.|.+  ++..+|+|.+........               ....+.+|+.++..++| ||++
T Consensus        30 ~~~y~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h-~~i~  106 (348)
T 2pml_X           30 INDYRIIRTLNQGKFNKIILCEK--DNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIKN-EYCL  106 (348)
T ss_dssp             ETTEEEEEEEECCSSCCEEEEEE--TTEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTTCCC-TTBC
T ss_pred             cCceEEEEEEcCCCCeEEEEEEc--CCceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHhCCC-CCcc
Confidence            35788889999999999999998  889999999986533211               11578999999999998 9999


Q ss_pred             eeeeeeEeCCeEEEEEeccCcccHHHH------HHh--cCCCCHHHHHHHHHHHHHHHHhhhc-cC
Q psy8006          69 QLHQVFESSHDMILLLELLTSAVDSKI------RES--FGSKSESGVQNCLEPSISVFSSLSK-FE  125 (126)
Q Consensus        69 ~l~~~~~~~~~~~lv~e~~~~~~L~~~------~~~--~~~~~~~~~~~~~~qi~~~l~~l~~-~~  125 (126)
                      ++++.+..++..++||||+++++|.++      +..  ...+++..+..++.|++.|++|||+ .+
T Consensus       107 ~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~  172 (348)
T 2pml_X          107 TCEGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCFIPIQVIKCIIKSVLNSFSYIHNEKN  172 (348)
T ss_dssp             CCSEEEESSSEEEEEEECCTTCBSSEESSSEESSCSSSCCCCCHHHHHHHHHHHHHHHHHHHHTSC
T ss_pred             eEEEEEeeCCeEEEEEeccCCCcHHHHHHHhhhhhhccccCCCHHHHHHHHHHHHHHHHHHhccCC
Confidence            999999999999999999999999887      654  4679999999999999999999998 65

>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*

Probab=99.85  E-value=4.8e-20  Score=118.36  Aligned_cols=117  Identities=12%  Similarity=0.078  Sum_probs=102.0

Q ss_pred             ccccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeEEEEE
Q psy8006           5 KNIISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLL   84 (126)
Q Consensus         5 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~~lv~   84 (126)
                      .+|...+.||+|+||.||+|.+..++..+|+|.+......    ..+.+|+..+..+.+|++++.+++.+......+++|
T Consensus        10 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~----~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv~   85 (298)
T 1csn_A           10 VHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRSDA----PQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVLVI   85 (298)
T ss_dssp             TTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCTTS----CCHHHHHHHHHHTTTCTTCCCEEEEEEETTEEEEEE
T ss_pred             cceEEEEEEeecCCEEEEEEEECCCCcEEEEEEeccCCcc----HHHHHHHHHHHHHhcCCCCCeEEeecCCCceeEEEE
Confidence            4577889999999999999999999999999998754322    247789999999965599999999999999999999


Q ss_pred             eccCcccHHHHHHhc-CCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          85 ELLTSAVDSKIRESF-GSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        85 e~~~~~~L~~~~~~~-~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      |++ +++|.+++... ..+++..+..++.|++.|++|||+.++
T Consensus        86 e~~-~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i  127 (298)
T 1csn_A           86 DLL-GPSLEDLLDLCGRKFSVKTVAMAAKQMLARVQSIHEKSL  127 (298)
T ss_dssp             ECC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHTTTE
T ss_pred             Eec-CCCHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhCCE
Confidence            999 88899998764 469999999999999999999998763

>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}

Probab=99.85  E-value=2.9e-20  Score=120.25  Aligned_cols=117  Identities=11%  Similarity=0.111  Sum_probs=95.3

Q ss_pred             ccccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeE---------
Q psy8006           5 KNIISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFE---------   75 (126)
Q Consensus         5 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~---------   75 (126)
                      ..|...+.||+|+||.||+|.+..++..+|+|.+....  ......+.+|+.++..++| ||++++++++.         
T Consensus        11 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~e~~~l~~l~h-~~iv~~~~~~~~~~~~~~~~   87 (320)
T 2i6l_A           11 SRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTD--PQSVKHALREIKIIRRLDH-DNIVKVFEILGPSGSQLTDD   87 (320)
T ss_dssp             TTEEEEEECC-----CEEEEEETTTTEEEEEEEEECCS--HHHHHHHHHHHHHHHTCCC-TTBCCEEEEECTTSCBCCC-
T ss_pred             CceeEEEEeccCCCeEEEEEEECCCCeEEEEEEEecCC--hHHHHHHHHHHHHHHhcCC-CCeeEEEEeccccccccccc
Confidence            35777899999999999999999999999999997542  3334568899999999998 99999998873         


Q ss_pred             -----eCCeEEEEEeccCcccHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          76 -----SSHDMILLLELLTSAVDSKIRESFGSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        76 -----~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                           .....++||||+++ +|.+++.. ..+++..+..++.|++.|++|||+.++
T Consensus        88 ~~~~~~~~~~~lv~e~~~~-~L~~~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~i  141 (320)
T 2i6l_A           88 VGSLTELNSVYIVQEYMET-DLANVLEQ-GPLLEEHARLFMYQLLRGLKYIHSANV  141 (320)
T ss_dssp             ---CCSCSEEEEEEECCSE-EHHHHHTT-CCCCHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred             cccccccCceeEEeeccCC-CHHHHhhc-CCccHHHHHHHHHHHHHHHHHHHhCCE
Confidence                 34678999999985 69888865 569999999999999999999998764

>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*

Probab=99.85  E-value=2.4e-20  Score=119.12  Aligned_cols=119  Identities=14%  Similarity=0.077  Sum_probs=99.9

Q ss_pred             ccccceeeccCccceeEEEEEEccC---CcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeEE
Q psy8006           5 KNIISSIINDMGKYATVRRCRDRKN---GTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMI   81 (126)
Q Consensus         5 ~~~~~~~~lg~g~~~~v~~~~~~~~---~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~~   81 (126)
                      ..|...+.||+|+||.||+|.+..+   +..+|+|.+.... .......+.+|+.++..++| |||+++++.+. .+..+
T Consensus        15 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~e~~~l~~l~h-~~iv~~~~~~~-~~~~~   91 (281)
T 1mp8_A           15 ERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCT-SDSVREKFLQEALTMRQFDH-PHIVKLIGVIT-ENPVW   91 (281)
T ss_dssp             GGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTT-SHHHHHHHHHHHHHHHTCCC-TTBCCEEEEEC-SSSCE
T ss_pred             HHeEEEeEeeecCCeeEEEEEEecCCCCceEEEEEeccccC-CHHHHHHHHHHHHHHHhCCC-CccceEEEEEc-cCccE
Confidence            4677789999999999999998654   4569999887543 23334568999999999998 99999999874 56789


Q ss_pred             EEEeccCcccHHHHHHhc-CCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          82 LLLELLTSAVDSKIRESF-GSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        82 lv~e~~~~~~L~~~~~~~-~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      +||||+++++|.+++..+ ..+++..+..++.|++.|++|||+.++
T Consensus        92 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i  137 (281)
T 1mp8_A           92 IIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRF  137 (281)
T ss_dssp             EEEECCTTEEHHHHHHHTTTTSCHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred             EEEecCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCe
Confidence            999999999999998764 369999999999999999999998764

>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...

Probab=99.85  E-value=7.1e-21  Score=123.76  Aligned_cols=122  Identities=16%  Similarity=0.133  Sum_probs=105.1

Q ss_pred             ccccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCc----hhHHHHHHHHHHHHHhcC-CCCceeeeeeeEeCCe
Q psy8006           5 KNIISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRST----DLKAEILHEVAVLEACRC-NSRIVQLHQVFESSHD   79 (126)
Q Consensus         5 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~----~~~~~~~~e~~~l~~~~~-~~~iv~l~~~~~~~~~   79 (126)
                      .+|...+.||+|+||.||+|.+..++..+|+|.+.......    .....+.+|+.++..+++ |||++++++.+..++.
T Consensus        43 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~i~~~~~~~~~~~~  122 (320)
T 3a99_A           43 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDS  122 (320)
T ss_dssp             TTEEEEEECSSSSSCEEEEEEETTTTEEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEECSSE
T ss_pred             CceEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEecccchhhhhhhhhhHHHHHHHHHHhhccCCCCceEEEEEEecCCc
Confidence            35778899999999999999999999999999998764322    111246789999999974 5999999999999999


Q ss_pred             EEEEEeccCc-ccHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          80 MILLLELLTS-AVDSKIRESFGSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        80 ~~lv~e~~~~-~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      .++++|++.+ ++|.+++..+..+++..+..++.|++.|++|||+.++
T Consensus       123 ~~lv~e~~~~~~~L~~~l~~~~~l~~~~~~~i~~qi~~~L~~LH~~~i  170 (320)
T 3a99_A          123 FVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGV  170 (320)
T ss_dssp             EEEEEECCSSEEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred             EEEEEEcCCCCccHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCc
Confidence            9999999986 7899999887889999999999999999999998763

>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...

Probab=99.85  E-value=1.3e-20  Score=122.36  Aligned_cols=120  Identities=18%  Similarity=0.205  Sum_probs=102.3

Q ss_pred             ccccceeeccCccceeEEEEEEc-----cCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCe
Q psy8006           5 KNIISSIINDMGKYATVRRCRDR-----KNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHD   79 (126)
Q Consensus         5 ~~~~~~~~lg~g~~~~v~~~~~~-----~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~   79 (126)
                      ++|...+.||+|+||.||+|.+.     .++..+|+|.+..... ......+.+|+.++..++| |||+++++.+...+.
T Consensus        25 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~E~~~l~~l~h-~~i~~~~~~~~~~~~  102 (322)
T 1p4o_A           25 EKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAAS-MRERIEFLNEASVMKEFNC-HHVVRLLGVVSQGQP  102 (322)
T ss_dssp             GGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSC-HHHHHHHHHHHHHGGGCCC-TTBCCEEEEECSSSS
T ss_pred             hheeeeeEeccCCceEEEeeeecCccCCCCceEEEEEecccccC-HHHHHHHHHHHHHHHhcCC-CCEeeeEEEEccCCc
Confidence            45778899999999999999876     4577899999975432 2334468899999999998 999999999998889


Q ss_pred             EEEEEeccCcccHHHHHHhc----------CCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          80 MILLLELLTSAVDSKIRESF----------GSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        80 ~~lv~e~~~~~~L~~~~~~~----------~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      .++|||++++++|.+++...          ..+++..+..++.|++.|+.|||+.++
T Consensus       103 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i  159 (322)
T 1p4o_A          103 TLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNANKF  159 (322)
T ss_dssp             CEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred             cEEEEEeCCCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHHHHHHHHHCCC
Confidence            99999999999999888642          357899999999999999999998764

>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*

Probab=99.85  E-value=5e-21  Score=124.38  Aligned_cols=119  Identities=16%  Similarity=0.134  Sum_probs=102.6

Q ss_pred             cccccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeEEEE
Q psy8006           4 IKNIISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILL   83 (126)
Q Consensus         4 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~~lv   83 (126)
                      .++|...+.||+|+||.||+|.+ .++..+|+|.+....  ......+.+|+.++..++| |||+++++.+...+..++|
T Consensus        38 ~~~y~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h-~~iv~~~~~~~~~~~~~lv  113 (321)
T 2qkw_B           38 TNNFDHKFLIGHGVFGKVYKGVL-RDGAKVALKRRTPES--SQGIEEFETEIETLSFCRH-PHLVSLIGFCDERNEMILI  113 (321)
T ss_dssp             CCCCSCCCCSCBCSSSEEEEEEC-TTCCEEEEEECCSCC--SSHHHHHHHHHHGGGSCCC-TTBCCEEEECCCTTCCEEE
T ss_pred             HhccCccceeecCCCeeEEEEEE-CCCCEEEEEEecccC--hHHHHHHHHHHHHHHhCCC-CCEeeEEEEEcCCCeEEEE
Confidence            45677888999999999999986 468899999887653  2334568999999999998 9999999999999999999


Q ss_pred             EeccCcccHHHHHHhcC----CCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          84 LELLTSAVDSKIRESFG----SKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        84 ~e~~~~~~L~~~~~~~~----~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      |||+++++|.+++....    .+++..+..++.|++.|++|||+.++
T Consensus       114 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i  160 (321)
T 2qkw_B          114 YKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHTRAI  160 (321)
T ss_dssp             EECCTTCBTGGGSSSSCCCSCCCCHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred             EEcCCCCcHHHHHhccCCCccccCHHHHHHHHHHHHHHHHHhcCCCe
Confidence            99999999988886432    58999999999999999999998763

>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*

Probab=99.85  E-value=2.9e-20  Score=119.95  Aligned_cols=116  Identities=16%  Similarity=0.116  Sum_probs=99.1

Q ss_pred             cceeeccCccceeEEEEEEccCCcEEEEEEeecCCC--CchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeEEEEEe
Q psy8006           8 ISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRR--STDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLLE   85 (126)
Q Consensus         8 ~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~--~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~~lv~e   85 (126)
                      ..++.||+|+||.||+|.+  ++..+|+|.+.....  .......+.+|+.++..++| |||+++++.+...+..+++||
T Consensus        34 ~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h-~~i~~~~~~~~~~~~~~lv~e  110 (307)
T 2nru_A           34 VGGNKMGEGGFGVVYKGYV--NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQH-ENLVELLGFSSDGDDLCLVYV  110 (307)
T ss_dssp             TTCCEEEECSSEEEEEEES--SSCEEEEEEECCCTTSCTTTHHHHHHHHHHHHHHCCC-TTBCCEEEEECSSSSCEEEEE
T ss_pred             ccCCccccCCCeEEEEEEE--CCceEEEEEEecccCcchHHHHHHHHHHHHHHHhcCC-CCeEEEEEEEecCCceEEEEE
Confidence            3458999999999999986  578899999976432  22335569999999999998 999999999998899999999


Q ss_pred             ccCcccHHHHHHh---cCCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          86 LLTSAVDSKIRES---FGSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        86 ~~~~~~L~~~~~~---~~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      ++++++|.+++..   ...+++..+..++.|++.|++|||+.++
T Consensus       111 ~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i  154 (307)
T 2nru_A          111 YMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHENHH  154 (307)
T ss_dssp             CCTTCBHHHHHHTGGGCCCCCHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred             ecCCCcHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhcCCe
Confidence            9999999888863   3469999999999999999999998763

>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}

Probab=99.85  E-value=1e-20  Score=124.41  Aligned_cols=118  Identities=19%  Similarity=0.239  Sum_probs=101.1

Q ss_pred             ccccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCe-----
Q psy8006           5 KNIISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHD-----   79 (126)
Q Consensus         5 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~-----   79 (126)
                      .+|...+.||+|+||.||+|.+..+|..+|+|.+............+.+|+.++..++| |||+++++.+...+.     
T Consensus        24 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h-~~iv~~~~~~~~~~~~~~~~  102 (353)
T 3coi_A           24 KTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQH-ENVIGLLDVFTPASSLRNFY  102 (353)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEESSTTSSHHHHHHHHHHHHHHHHCCC-TTBCCCSEEECSCSSGGGCC
T ss_pred             ceEEEeeeEecCCCeEEEEEEECCCCCEEEEEEecccccchHHHHHHHHHHHHHHhcCC-CCcccHhheEecccccccce
Confidence            46778899999999999999999999999999998765444445568999999999998 999999999876653     


Q ss_pred             -EEEEEeccCcccHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          80 -MILLLELLTSAVDSKIRESFGSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        80 -~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                       .+++||++++ +|.+++..  .+++..+..++.|++.|++|||+.++
T Consensus       103 ~~~lv~e~~~~-~l~~~~~~--~~~~~~~~~i~~qi~~al~~LH~~~i  147 (353)
T 3coi_A          103 DFYLVMPFMQT-DLQKIMGL--KFSEEKIQYLVYQMLKGLKYIHSAGV  147 (353)
T ss_dssp             CCEEEEECCSE-EGGGTTTS--CCCHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred             eEEEEeccccC-CHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCc
Confidence             4999999985 57766653  58999999999999999999998764

>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*

Probab=99.85  E-value=2e-20  Score=121.48  Aligned_cols=117  Identities=12%  Similarity=0.090  Sum_probs=98.6

Q ss_pred             ccceeeccCccceeEEEEE----EccCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeC--CeE
Q psy8006           7 IISSIINDMGKYATVRRCR----DRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESS--HDM   80 (126)
Q Consensus         7 ~~~~~~lg~g~~~~v~~~~----~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~--~~~   80 (126)
                      |...+.||+|+||.||.+.    +..++..+|+|.+.... .......+.+|+.+++.++| |||+++++++...  ...
T Consensus        33 ~~~~~~lG~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~h-~~iv~~~~~~~~~~~~~~  110 (318)
T 3lxp_A           33 LKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADA-GPQHRSGWKQEIDILRTLYH-EHIIKYKGCCEDAGAASL  110 (318)
T ss_dssp             EEEEEEEEECSSEEEEEEEECSCC--CCEEEEEEEECTTC-CHHHHHHHHHHHHHHHHCCC-TTBCCEEEEEEETTTTEE
T ss_pred             HhhhheecCCCCeEEEEEEEccCCCCCCcEEEEEEecccc-ChHHHHHHHHHHHHHHhCCC-cchhhEEEEEecCCCceE
Confidence            4678899999999998775    44578899999998653 23334568999999999998 9999999999874  578


Q ss_pred             EEEEeccCcccHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          81 ILLLELLTSAVDSKIRESFGSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        81 ~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      ++||||+++++|.+++... .+++..+..++.|++.|++|||+.++
T Consensus       111 ~lv~e~~~~~~L~~~l~~~-~~~~~~~~~i~~~l~~~l~~LH~~~i  155 (318)
T 3lxp_A          111 QLVMEYVPLGSLRDYLPRH-SIGLAQLLLFAQQICEGMAYLHAQHY  155 (318)
T ss_dssp             EEEECCCTTCBHHHHGGGS-CCCHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred             EEEEecccCCcHHHHHhhC-CCCHHHHHHHHHHHHHHHHHHHhCCc
Confidence            9999999999999999764 49999999999999999999998763

>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B

Probab=99.85  E-value=1.6e-20  Score=127.19  Aligned_cols=116  Identities=13%  Similarity=0.141  Sum_probs=99.4

Q ss_pred             ccccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeEEEEE
Q psy8006           5 KNIISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLL   84 (126)
Q Consensus         5 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~~lv~   84 (126)
                      ++|...+.||+|+||.||+|.+.. +..+|+|.+.....   ....+.+|+.++..++| |||+++++.+. .+..++||
T Consensus       188 ~~~~~~~~lG~G~fg~V~~~~~~~-~~~vavK~~~~~~~---~~~~~~~E~~~l~~l~h-~~iv~l~~~~~-~~~~~lv~  261 (454)
T 1qcf_A          188 ESLKLEKKLGAGQFGEVWMATYNK-HTKVAVKTMKPGSM---SVEAFLAEANVMKTLQH-DKLVKLHAVVT-KEPIYIIT  261 (454)
T ss_dssp             GGEEEEEEEECCSSEEEEEEEETT-TEEEEEEEECTTSB---CHHHHHHHHHHHTTCCC-TTBCCEEEEEC-SSSCEEEE
T ss_pred             HHeEEEEEcccCCceEEEEEEECC-ccEEEEEEecCCCc---cHHHHHHHHHHHhhCCC-CCEeeEEEEEe-CCccEEEE
Confidence            456678899999999999998854 67799999986543   24579999999999998 99999999886 56789999


Q ss_pred             eccCcccHHHHHHhc--CCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          85 ELLTSAVDSKIRESF--GSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        85 e~~~~~~L~~~~~~~--~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      ||+++++|.+++...  ..+++..+..++.|++.|++|||+.++
T Consensus       262 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~i  305 (454)
T 1qcf_A          262 EFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNY  305 (454)
T ss_dssp             CCCTTCBHHHHHHSHHHHTCCHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred             eecCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCc
Confidence            999999999998743  368999999999999999999998764

>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=99.85  E-value=5.4e-20  Score=117.81  Aligned_cols=116  Identities=20%  Similarity=0.207  Sum_probs=97.1

Q ss_pred             cceeeccCccceeEEEEEEc--cCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeEEEEEe
Q psy8006           8 ISSIINDMGKYATVRRCRDR--KNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLLE   85 (126)
Q Consensus         8 ~~~~~lg~g~~~~v~~~~~~--~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~~lv~e   85 (126)
                      ..++.||+|+||.||+|.+.  .++..+|+|.+.... .......+.+|+.++..++| |||+++++.+ ..+..++|||
T Consensus        13 i~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~h-~~i~~~~~~~-~~~~~~lv~e   89 (287)
T 1u59_A           13 IADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGT-EKADTEEMMREAQIMHQLDN-PYIVRLIGVC-QAEALMLVME   89 (287)
T ss_dssp             EEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSSC-CHHHHHHHHHHHHHHHHCCC-TTBCCEEEEE-ESSSEEEEEE
T ss_pred             hhhccccccCceeEEEeEeccCCCcceEEEEecCCcc-chhHHHHHHHHHHHHHhCCC-CCEeEEEEEe-cCCCcEEEEE
Confidence            34459999999999999864  467789999998653 23334568999999999998 9999999998 4566899999


Q ss_pred             ccCcccHHHHHHh-cCCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          86 LLTSAVDSKIRES-FGSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        86 ~~~~~~L~~~~~~-~~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      ++++++|.+++.. ...+++..+..++.|++.|+.|||+.++
T Consensus        90 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i  131 (287)
T 1u59_A           90 MAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKNF  131 (287)
T ss_dssp             CCTTEEHHHHHTTCTTTSCHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred             eCCCCCHHHHHHhCCccCCHHHHHHHHHHHHHHHHHHHHCCE
Confidence            9999999998864 3569999999999999999999998763

>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7

Probab=99.85  E-value=6.2e-21  Score=125.18  Aligned_cols=121  Identities=17%  Similarity=0.219  Sum_probs=97.4

Q ss_pred             cccccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCch---hHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeE
Q psy8006           4 IKNIISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTD---LKAEILHEVAVLEACRCNSRIVQLHQVFESSHDM   80 (126)
Q Consensus         4 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~---~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~   80 (126)
                      ...|...+.||+|+||.||.|.+..++..+|+|.+........   ....+.+|+.++..++| |||+++++.+...+..
T Consensus         9 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h-~~iv~~~~~~~~~~~~   87 (346)
T 1ua2_A            9 AKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSH-PNIIGLLDAFGHKSNI   87 (346)
T ss_dssp             ----CEEEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCC-TTBCCEEEEECCTTCC
T ss_pred             hcccEEEeEEeecCCEEEEEEEECCCCcEEEEEEEecCCcchhhhhhhHHHHHHHHHHhhCCC-CCCCeEEEEEeeCCce
Confidence            4568888999999999999999999999999999986543221   12357899999999998 9999999999999999


Q ss_pred             EEEEeccCcccHHHHHHhc-CCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          81 ILLLELLTSAVDSKIRESF-GSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        81 ~lv~e~~~~~~L~~~~~~~-~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      ++||||++++ |.+++... ..+++..+..++.|++.|++|||+.++
T Consensus        88 ~lv~e~~~~~-l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i  133 (346)
T 1ua2_A           88 SLVFDFMETD-LEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLHQHWI  133 (346)
T ss_dssp             EEEEECCSEE-HHHHHTTCCSSCCSSHHHHHHHHHHHHHHHHHHTTC
T ss_pred             EEEEEcCCCC-HHHHHHhcCcCCCHHHHHHHHHHHHHHHHHHHHCCE
Confidence            9999999984 77777654 468999999999999999999998764

>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}

Probab=99.85  E-value=3.2e-20  Score=120.88  Aligned_cols=119  Identities=15%  Similarity=0.182  Sum_probs=100.6

Q ss_pred             ccccceeeccCccceeEEEEE----EccCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCC--
Q psy8006           5 KNIISSIINDMGKYATVRRCR----DRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSH--   78 (126)
Q Consensus         5 ~~~~~~~~lg~g~~~~v~~~~----~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~--   78 (126)
                      .+|...+.||+|+||.||++.    +..++..+|+|.+....  ......+.+|+.++..++| |||+++++.+...+  
T Consensus        41 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h-~~iv~~~~~~~~~~~~  117 (326)
T 2w1i_A           41 RHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHST--EEHLRDFEREIEILKSLQH-DNIVKYKGVCYSAGRR  117 (326)
T ss_dssp             GGEEEEEEEECCSSEEEEEEEECTTSSSCCEEEEEEEESSCC--SHHHHHHHHHHHHHHTCCC-TTBCCEEEEECC----
T ss_pred             HHceeeeeeccCCCeEEEEEEeccccCCCceEEEEEEeccCC--HHHHHHHHHHHHHHHhCCC-CCeeeEEEEEEecCCC
Confidence            346778899999999999998    46678899999997642  3344568999999999998 99999999886544  


Q ss_pred             eEEEEEeccCcccHHHHHHhc-CCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          79 DMILLLELLTSAVDSKIRESF-GSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        79 ~~~lv~e~~~~~~L~~~~~~~-~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      ..++|||++++++|.+++... ..+++..+..++.|++.|++|||+.++
T Consensus       118 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~i  166 (326)
T 2w1i_A          118 NLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRY  166 (326)
T ss_dssp             CCEEEECCCTTCBHHHHHHHSTTSSCHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred             ceEEEEECCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCE
Confidence            689999999999999998764 469999999999999999999998763

>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...

Probab=99.85  E-value=1.6e-20  Score=127.15  Aligned_cols=116  Identities=15%  Similarity=0.116  Sum_probs=99.5

Q ss_pred             ccccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeEEEEE
Q psy8006           5 KNIISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLL   84 (126)
Q Consensus         5 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~~lv~   84 (126)
                      ++|...+.||+|+||.||+|.+.. +..+|+|.+......   ...+.+|+.++++++| |||+++++.+.. +..++||
T Consensus       184 ~~~~~~~~lG~G~fg~Vy~~~~~~-~~~vavK~~~~~~~~---~~~~~~E~~~l~~l~h-p~iv~~~~~~~~-~~~~iv~  257 (452)
T 1fmk_A          184 ESLRLEVKLGQGCFGEVWMGTWNG-TTRVAIKTLKPGTMS---PEAFLQEAQVMKKLRH-EKLVQLYAVVSE-EPIYIVT  257 (452)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEETT-TEEEEEEECCTTSSC---HHHHHHHHHHHHHCCC-TTBCCEEEEECS-SSCEEEE
T ss_pred             hHceeeeeecCCCCeEEEEEEECC-CceEEEEEeccCCCC---HHHHHHHHHHHHhCCC-CCEeeEEEEEcC-CceEEEe
Confidence            456678899999999999999865 456999999865432   3468999999999998 999999998865 6789999


Q ss_pred             eccCcccHHHHHHh--cCCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          85 ELLTSAVDSKIRES--FGSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        85 e~~~~~~L~~~~~~--~~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      ||+++++|.+++..  ...+++..+..++.|++.|++|||+.++
T Consensus       258 e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~i  301 (452)
T 1fmk_A          258 EYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNY  301 (452)
T ss_dssp             CCCTTCBHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred             hhhcCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCe
Confidence            99999999999864  3469999999999999999999998764

>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}

Probab=99.85  E-value=1e-20  Score=121.96  Aligned_cols=121  Identities=18%  Similarity=0.222  Sum_probs=100.0

Q ss_pred             cccccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCC--chhHHHHHHHHHHHHHhcCCCCceeeeeeeE--eCCe
Q psy8006           4 IKNIISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRS--TDLKAEILHEVAVLEACRCNSRIVQLHQVFE--SSHD   79 (126)
Q Consensus         4 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~--~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~--~~~~   79 (126)
                      +.+|...+.||+|+||.||.+.+..++..+|+|.+......  ......+.+|+.++..++| |||+++++.+.  ....
T Consensus         4 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h-~~i~~~~~~~~~~~~~~   82 (305)
T 2wtk_C            4 IGKYLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRH-KNVIQLVDVLYNEEKQK   82 (305)
T ss_dssp             -CCBCCCCEEEECSSCEEEEEEBTTTCCEEEEEEECHHHHHHSTTHHHHHHHHHHHHTTCCC-TTBCCEEEEEECC---C
T ss_pred             ccceeEeeEEecCCCeEEEEEEECCCCcEEEEEEeccccccccchhHHHHHHHHHHHHhcCC-CCeeEEEEEEEcCCCCe
Confidence            45788899999999999999999999999999999865321  1234568999999999998 99999999984  4457


Q ss_pred             EEEEEeccCcccHHHHHHh--cCCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          80 MILLLELLTSAVDSKIRES--FGSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        80 ~~lv~e~~~~~~L~~~~~~--~~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      .++||||++++ +.+++..  ...+++..+..++.|++.|+.|||+.++
T Consensus        83 ~~lv~e~~~~~-l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~i  130 (305)
T 2wtk_C           83 MYMVMEYCVCG-MQEMLDSVPEKRFPVCQAHGYFCQLIDGLEYLHSQGI  130 (305)
T ss_dssp             EEEEEECCSEE-HHHHHHHSTTCSCCHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred             EEEEehhccCC-HHHHHHhCcccccCHHHHHHHHHHHHHHHHHHHHCCe
Confidence            89999999998 6666654  3569999999999999999999998763

>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}

Probab=99.85  E-value=4.1e-21  Score=124.24  Aligned_cols=120  Identities=17%  Similarity=0.104  Sum_probs=97.5

Q ss_pred             ccccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCch----hHHHHHHHHHHHHHh----cCCCCceeeeeeeEe
Q psy8006           5 KNIISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTD----LKAEILHEVAVLEAC----RCNSRIVQLHQVFES   76 (126)
Q Consensus         5 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~----~~~~~~~e~~~l~~~----~~~~~iv~l~~~~~~   76 (126)
                      ++|...+.||+|+||.||+|.+..++..+|+|.+........    ....+.+|+.++.++    +| |||+++++.+..
T Consensus        31 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~h-~~i~~~~~~~~~  109 (312)
T 2iwi_A           31 AEYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGH-PGVIRLLDWFET  109 (312)
T ss_dssp             --CEEEEEEEEETTEEEEEEECTTTCCEEEEEECCSTTTC--------CCCCHHHHHHHHHHSSCCC-SSBCCEEEEC--
T ss_pred             hceEEeeEEEcCCCEEEEEEEEccCCeEEEEEEEecccccccccchhhHHHHHHHHHHHhhcccCCC-CCeeeEEEEEec
Confidence            357788999999999999999999999999999976543221    112366789999998    67 999999999998


Q ss_pred             CCeEEEEEec-cCcccHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhhccC
Q psy8006          77 SHDMILLLEL-LTSAVDSKIRESFGSKSESGVQNCLEPSISVFSSLSKFE  125 (126)
Q Consensus        77 ~~~~~lv~e~-~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~l~~~~  125 (126)
                      .+..++++|+ +.+++|.+++..+..+++..+..++.|++.|++|||+.+
T Consensus       110 ~~~~~~v~e~~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~  159 (312)
T 2iwi_A          110 QEGFMLVLERPLPAQDLFDYITEKGPLGEGPSRCFFGQVVAAIQHCHSRG  159 (312)
T ss_dssp             ---CEEEEECCSSEEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHHT
T ss_pred             CCeEEEEEEecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            8899999999 788999999988788999999999999999999999875

>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7

Probab=99.85  E-value=4e-20  Score=118.75  Aligned_cols=118  Identities=12%  Similarity=0.064  Sum_probs=98.2

Q ss_pred             ccceeeccCccceeEEEEEEccCCc---EEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeE-EE
Q psy8006           7 IISSIINDMGKYATVRRCRDRKNGT---QYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDM-IL   82 (126)
Q Consensus         7 ~~~~~~lg~g~~~~v~~~~~~~~~~---~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~-~l   82 (126)
                      |..++.||+|+||.||+|.+..++.   .+|+|.+.... .......+.+|+.++..++| |||+++++++...+.. ++
T Consensus        23 ~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~-~~~~~~~~~~E~~~l~~l~h-~~iv~~~~~~~~~~~~~~~  100 (298)
T 3pls_A           23 THSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRIT-EMQQVEAFLREGLLMRGLNH-PNVLALIGIMLPPEGLPHV  100 (298)
T ss_dssp             EEEEEEEEEETTEEEEEEEEECSSSCEEEEEEEEETTCC-SHHHHHHHHHHHHHHHTCCC-TTBCCCCEEECCSSSCCEE
T ss_pred             EccCceeccCCCceEEEEEEecCCCceeeeeeeeccccc-cHHHHHHHHHHHHHHHhCCC-CCeeeEEEEEecCCCCcEE
Confidence            3456899999999999998755544   79999987533 22334568999999999998 9999999999766554 99


Q ss_pred             EEeccCcccHHHHHHh-cCCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          83 LLELLTSAVDSKIRES-FGSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        83 v~e~~~~~~L~~~~~~-~~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      +||++.+++|.+++.. ...+++..+..++.|++.|++|||+.++
T Consensus       101 v~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~i  145 (298)
T 3pls_A          101 LLPYMCHGDLLQFIRSPQRNPTVKDLISFGLQVARGMEYLAEQKF  145 (298)
T ss_dssp             EECCCTTCBHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred             EEecccCCCHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhCCc
Confidence            9999999999998876 4578999999999999999999998764

>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...

Probab=99.85  E-value=4.6e-20  Score=120.23  Aligned_cols=120  Identities=16%  Similarity=0.100  Sum_probs=95.2

Q ss_pred             cccccceeeccCccceeEEEEEEccCCcE----EEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCe
Q psy8006           4 IKNIISSIINDMGKYATVRRCRDRKNGTQ----YAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHD   79 (126)
Q Consensus         4 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~----~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~   79 (126)
                      ..+|...+.||+|+||.||+|.+..++..    +|+|.+..... ......+.+|+.++.+++| |||+++++++..+. 
T Consensus        14 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~E~~~l~~l~h-~~iv~~~~~~~~~~-   90 (327)
T 3poz_A           14 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATS-PKANKEILDEAYVMASVDN-PHVCRLLGICLTST-   90 (327)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEECC----CCEEEEEEEC--------CHHHHHHHHHHHHHCCB-TTBCCEEEEEESSS-
T ss_pred             HHHcccceEEeeCCCeEEEEEEEcCCCceEEEEEEEeecccccC-HHHHHHHHHHHHHHHhCCC-CCEeEEEEEEecCC-
Confidence            35678889999999999999998777764    47777764332 2334578999999999998 99999999998654 


Q ss_pred             EEEEEeccCcccHHHHHHh-cCCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          80 MILLLELLTSAVDSKIRES-FGSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        80 ~~lv~e~~~~~~L~~~~~~-~~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      .+++++++.+++|.+++.. ...+++..+..++.|++.|++|||+.++
T Consensus        91 ~~~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~i  138 (327)
T 3poz_A           91 VQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRL  138 (327)
T ss_dssp             EEEEEECCTTCBHHHHHHHSTTSCCHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred             eEEEEEecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhCCe
Confidence            7789999999999888876 4579999999999999999999998764

>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7

Probab=99.84  E-value=2.5e-20  Score=128.52  Aligned_cols=116  Identities=15%  Similarity=0.116  Sum_probs=99.5

Q ss_pred             ccccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeEEEEE
Q psy8006           5 KNIISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLL   84 (126)
Q Consensus         5 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~~lv~   84 (126)
                      ++|...+.||+|+||.||++.+.. +..||+|.+......   ...+.+|+.++++++| |||+++++.+.. +..++||
T Consensus       267 ~~~~~~~~lG~G~fg~Vy~~~~~~-~~~vavK~~~~~~~~---~~~~~~E~~~l~~l~h-pniv~~~~~~~~-~~~~lv~  340 (535)
T 2h8h_A          267 ESLRLEVKLGQGCFGEVWMGTWNG-TTRVAIKTLKPGTMS---PEAFLQEAQVMKKLRH-EKLVQLYAVVSE-EPIYIVT  340 (535)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETT-TEEEEEEEECTTSSC---HHHHHHHHHHHHHCCC-TTBCCEEEEECS-SSCEEEE
T ss_pred             hhhhhheecccCCCeEEEEEEECC-CceEEEEEeCCCCCC---HHHHHHHHHHHHhCCC-CCEeeEEEEEee-ccceEee
Confidence            456678899999999999999865 456999999865432   3468999999999998 999999998865 6789999


Q ss_pred             eccCcccHHHHHHh--cCCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          85 ELLTSAVDSKIRES--FGSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        85 e~~~~~~L~~~~~~--~~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      ||+++++|.++++.  ...+++..+..++.|++.||+|||+.++
T Consensus       341 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~i  384 (535)
T 2h8h_A          341 EYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNY  384 (535)
T ss_dssp             CCCTTEEHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred             ehhcCCcHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCe
Confidence            99999999999864  3468999999999999999999998764

>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...

Probab=99.84  E-value=5.6e-20  Score=121.37  Aligned_cols=118  Identities=14%  Similarity=0.162  Sum_probs=101.1

Q ss_pred             ccccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeC-----Ce
Q psy8006           5 KNIISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESS-----HD   79 (126)
Q Consensus         5 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~-----~~   79 (126)
                      ..|...+.||+|+||.||++.+..++..+|+|.+.... .......+.+|+.++..++| |||+++++++..+     ..
T Consensus        27 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~E~~~l~~l~h-~niv~~~~~~~~~~~~~~~~  104 (364)
T 3qyz_A           27 PRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFE-HQTYCQRTLREIKILLRFRH-ENIIGINDIIRAPTIEQMKD  104 (364)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCTT-CHHHHHHHHHHHHHHHHCCC-TTBCCCCEEECCSSTTTCCC
T ss_pred             ccEEEEEEeecCCCeEEEEEEECCCCeEEEEEEecccc-CcHHHHHHHHHHHHHHhcCC-CCCccceeEEecCCccccce
Confidence            35778899999999999999999999999999997543 22334568999999999998 9999999998654     36


Q ss_pred             EEEEEeccCcccHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          80 MILLLELLTSAVDSKIRESFGSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        80 ~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      .|++||++++ +|.++++. ..+++..+..++.|++.|++|||+.++
T Consensus       105 ~~iv~e~~~~-~L~~~l~~-~~~~~~~~~~i~~qi~~aL~~LH~~~i  149 (364)
T 3qyz_A          105 VYIVQDLMET-DLYKLLKT-QHLSNDHICYFLYQILRGLKYIHSANV  149 (364)
T ss_dssp             EEEEEECCSE-EHHHHHHH-CCCCHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred             EEEEEcccCc-CHHHHHHh-CCCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence            8999999986 58888875 569999999999999999999998763

>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}

Probab=99.84  E-value=1.2e-19  Score=118.14  Aligned_cols=117  Identities=19%  Similarity=0.229  Sum_probs=98.1

Q ss_pred             cccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeE--------eC
Q psy8006           6 NIISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFE--------SS   77 (126)
Q Consensus         6 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~--------~~   77 (126)
                      +|...+.||+|+||.||++.+..++..+|+|.+....  ......+.+|+.++.++..||||+++++.+.        ..
T Consensus        29 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~~h~~iv~~~~~~~~~~~~~~~~~  106 (337)
T 3ll6_A           29 RLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNE--EEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEESDTGQ  106 (337)
T ss_dssp             EEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEESS--HHHHHHHHHHHHHHHHHTTSTTBCCEEEEEEECTTTSTTSS
T ss_pred             eEEEEEEEccCCceEEEEEEECCCCcEEEEEEecCCc--hHHHHHHHHHHHHHHHhccCCChhhccccccccccccccCC
Confidence            5778899999999999999999999999999986542  2334468899999999973399999999984        33


Q ss_pred             CeEEEEEeccCcccHHHHHHh---cCCCCHHHHHHHHHHHHHHHHhhhccC
Q psy8006          78 HDMILLLELLTSAVDSKIRES---FGSKSESGVQNCLEPSISVFSSLSKFE  125 (126)
Q Consensus        78 ~~~~lv~e~~~~~~L~~~~~~---~~~~~~~~~~~~~~qi~~~l~~l~~~~  125 (126)
                      ...+++|||+++ +|.+++..   ...+++..+..++.|++.|+.|||..+
T Consensus       107 ~~~~lv~e~~~g-~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~  156 (337)
T 3ll6_A          107 AEFLLLTELCKG-QLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMHRQK  156 (337)
T ss_dssp             EEEEEEEECCSE-EHHHHHHHHHTTCSCCHHHHHHHHHHHHHHHHHHHTSS
T ss_pred             ceEEEEEEecCC-CHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            458999999975 58777653   457999999999999999999999876

>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}

Probab=99.84  E-value=4.5e-20  Score=129.02  Aligned_cols=113  Identities=19%  Similarity=0.201  Sum_probs=96.2

Q ss_pred             eeccCccceeEEEEEEc--cCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeEEEEEeccC
Q psy8006          11 IINDMGKYATVRRCRDR--KNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLLELLT   88 (126)
Q Consensus        11 ~~lg~g~~~~v~~~~~~--~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~~lv~e~~~   88 (126)
                      ..||+|+||.||+|.+.  ..+..||+|.+..... ......+.+|+.++..++| |||+++++++.. +..++||||++
T Consensus       342 ~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~-~~~~~~~~~E~~il~~l~h-pniv~l~~~~~~-~~~~lv~E~~~  418 (613)
T 2ozo_A          342 IELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTE-KADTEEMMREAQIMHQLDN-PYIVRLIGVCQA-EALMLVMEMAG  418 (613)
T ss_dssp             EEEEECSSSEEEEEEEECSSCEEEEEEEECCCCCS-STTHHHHHHHHHHHTTCCC-TTBCCEEEEEES-SSEEEEEECCT
T ss_pred             cEEecCCCcEEEEEEEecCCCcEEEEEEEcCCCCC-hHHHHHHHHHHHHHHhCCC-CCEeeEEEEecc-CCeEEEEEeCC
Confidence            37999999999999875  3456799999986532 3345579999999999998 999999999875 56899999999


Q ss_pred             cccHHHHHHhc-CCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          89 SAVDSKIRESF-GSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        89 ~~~L~~~~~~~-~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      +++|.+++... ..+++..+..++.|++.||+|||+.++
T Consensus       419 ~g~L~~~l~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~i  457 (613)
T 2ozo_A          419 GGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKNF  457 (613)
T ss_dssp             TCBHHHHHTTCTTTSCHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred             CCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCE
Confidence            99999988653 469999999999999999999998764

>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...

Probab=99.84  E-value=3.1e-20  Score=119.07  Aligned_cols=117  Identities=12%  Similarity=0.053  Sum_probs=97.6

Q ss_pred             ccccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeEEEEE
Q psy8006           5 KNIISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLL   84 (126)
Q Consensus         5 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~~lv~   84 (126)
                      ..|...+.||+|+||.||++.+..   .+|+|.+............+.+|+.+++.++| ||+++++++. .....++||
T Consensus        24 ~~y~~~~~lG~G~~g~Vy~~~~~~---~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h-~~iv~~~~~~-~~~~~~lv~   98 (289)
T 3og7_A           24 GQITVGQRIGSGSFGTVYKGKWHG---DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRH-VNILLFMGYS-TAPQLAIVT   98 (289)
T ss_dssp             TSCEEEEEEEECSSEEEEEEESSS---EEEEEEESCSSCCHHHHHHHHHHHHHHTTCCC-TTBCCEEEEE-CSSSCEEEE
T ss_pred             cceeeeeEecCCCCeEEEEEEEcC---ceEEEEEeccCCCHHHHHHHHHHHHHHHhCCC-CcEEEEEeec-cCCccEEEE
Confidence            457778899999999999997643   59999998766555555679999999999998 9999999854 556689999


Q ss_pred             eccCcccHHHHHHh-cCCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          85 ELLTSAVDSKIRES-FGSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        85 e~~~~~~L~~~~~~-~~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      ||+++++|.+++.. ...+++..+..++.|++.|++|||+.++
T Consensus        99 e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~lH~~~i  141 (289)
T 3og7_A           99 QWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHAKSI  141 (289)
T ss_dssp             ECCCEEEHHHHHTTC---CCHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred             EecCCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhCCc
Confidence            99999999888854 4579999999999999999999998764

>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...

Probab=99.84  E-value=3.5e-20  Score=118.16  Aligned_cols=117  Identities=12%  Similarity=0.098  Sum_probs=99.5

Q ss_pred             cccccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeEEEE
Q psy8006           4 IKNIISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILL   83 (126)
Q Consensus         4 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~~lv   83 (126)
                      .++|...+.||+|+||.||.|.+. .+..+|+|.+......   ...+.+|+.++..++| ||++++++.+. .+..+++
T Consensus        12 ~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~---~~~~~~E~~~l~~l~h-~~i~~~~~~~~-~~~~~~v   85 (279)
T 1qpc_A           12 RETLKLVERLGAGQFGEVWMGYYN-GHTKVAVKSLKQGSMS---PDAFLAEANLMKQLQH-QRLVRLYAVVT-QEPIYII   85 (279)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEET-TTEEEEEEEECTTSSC---HHHHHHHHHHHHHCCC-TTBCCEEEEEC-SSSCEEE
T ss_pred             HHhhhheeeecCCCCeEEEEEEEc-CCcEEEEEEecCCccc---HHHHHHHHHHHHhCCC-cCcceEEEEEc-CCCcEEE
Confidence            356778899999999999999875 4668999999765432   3468999999999998 99999999876 4568999


Q ss_pred             EeccCcccHHHHHHhcC--CCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          84 LELLTSAVDSKIRESFG--SKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        84 ~e~~~~~~L~~~~~~~~--~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      ||++++++|.+++....  .+++..+..++.|++.|++|||+.++
T Consensus        86 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i  130 (279)
T 1qpc_A           86 TEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNY  130 (279)
T ss_dssp             EECCTTCBHHHHTTSHHHHTCCHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred             EecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence            99999999999987532  69999999999999999999998763

>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*

Probab=99.84  E-value=6.6e-20  Score=117.05  Aligned_cols=120  Identities=15%  Similarity=0.119  Sum_probs=100.2

Q ss_pred             cccccceeeccCccceeEEEEEEcc---CCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeE
Q psy8006           4 IKNIISSIINDMGKYATVRRCRDRK---NGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDM   80 (126)
Q Consensus         4 ~~~~~~~~~lg~g~~~~v~~~~~~~---~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~   80 (126)
                      .++|...+.||+|+||.||+|.+..   ++..+|+|.+..... ......+.+|+.++..++| ||++++++.+.. +..
T Consensus        11 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~h-~~i~~~~~~~~~-~~~   87 (281)
T 3cc6_A           11 REDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCT-LDNKEKFMSEAVIMKNLDH-PHIVKLIGIIEE-EPT   87 (281)
T ss_dssp             GGGEEEEEEEEECSSSEEEEEEEECTTCCEEEEEEEECCTTSC-HHHHHHHHHHHHHHHHHCC-TTBCCEEEEECS-SSC
T ss_pred             ccceEEEEEEEecCCeeEEEeEEcCCCCCcceEEEEecccccC-chHHHHHHHHHHHHHhCCC-CCcceEEEEEcC-CCC
Confidence            4678889999999999999998653   334699999876532 2334568999999999998 999999998764 457


Q ss_pred             EEEEeccCcccHHHHHHhc-CCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          81 ILLLELLTSAVDSKIRESF-GSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        81 ~lv~e~~~~~~L~~~~~~~-~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      +++||++++++|.+++... ..+++..+..++.|++.|++|||+.++
T Consensus        88 ~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i  134 (281)
T 3cc6_A           88 WIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLESINC  134 (281)
T ss_dssp             EEEEECCTTCBHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred             EEEEecCCCCCHHHHHHhccccCCHHHHHHHHHHHHHHHHHHHHCCc
Confidence            8999999999999988754 469999999999999999999998764

>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A

Probab=99.84  E-value=2.8e-21  Score=128.13  Aligned_cols=120  Identities=12%  Similarity=0.174  Sum_probs=93.3

Q ss_pred             ccccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCC-chhHHHHHHHHHHHH---HhcCCCCceeee-------ee
Q psy8006           5 KNIISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRS-TDLKAEILHEVAVLE---ACRCNSRIVQLH-------QV   73 (126)
Q Consensus         5 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~-~~~~~~~~~e~~~l~---~~~~~~~iv~l~-------~~   73 (126)
                      ++|...+.||+|+||.||+|.+..++..+|+|.+...... ......+.+|+.++.   .++| |||++++       +.
T Consensus        73 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~h-pniv~~~~~~~~~~~~  151 (377)
T 3byv_A           73 RTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKN-QKQAKVHLRFIFPFDL  151 (377)
T ss_dssp             EEEEEEEEEEEETTEEEEEEEC-CCCCEEEEEEEEECC-CCTTHHHHHHHHHHGGGGSTTCCS-HHHHHHHHCBCCCSEE
T ss_pred             ceEEEcceeecCCCEEEEEEEECCCCcEEEEEEEeeccccchHHHHHHHHHHHHHHhccccCC-HHHHHHHhhhhhhhhh
Confidence            5577789999999999999999999999999999865432 233456889995544   4566 9999988       55


Q ss_pred             eEeCC-----------------eEEEEEeccCcccHHHHHHhcCCCCH-------HHHHHHHHHHHHHHHhhhccCC
Q psy8006          74 FESSH-----------------DMILLLELLTSAVDSKIRESFGSKSE-------SGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        74 ~~~~~-----------------~~~lv~e~~~~~~L~~~~~~~~~~~~-------~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      +..++                 ..|++|||++ |+|.+++.....+++       ..+..++.|++.||+|||+.++
T Consensus       152 ~~~~~~~~~~~~~~~~~~~~i~~~~lv~E~~~-g~L~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~i  227 (377)
T 3byv_A          152 VKDPQKKKMIRVRLDERDMWVLSRFFLYPRMQ-SNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHYGL  227 (377)
T ss_dssp             EECTTSCSEEEC------CEEESEEEEEECCS-EEHHHHHHHHHHTTTTTHHHHHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred             hhccCCccccccccCCCceEEEEEEEEEeccC-CCHHHHHHhccccccccccccHHHHHHHHHHHHHHHHHHHhCCe
Confidence            55443                 2889999995 679998876544555       7778899999999999998763

>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...

Probab=99.84  E-value=5.3e-20  Score=118.29  Aligned_cols=120  Identities=10%  Similarity=0.041  Sum_probs=98.1

Q ss_pred             ccccceeeccCccceeEEEEEEccC---CcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeee-EeCCeE
Q psy8006           5 KNIISSIINDMGKYATVRRCRDRKN---GTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVF-ESSHDM   80 (126)
Q Consensus         5 ~~~~~~~~lg~g~~~~v~~~~~~~~---~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~-~~~~~~   80 (126)
                      ..|...+.||+|+||.||+|.+..+   +..+|+|.+.... .......+.+|+.++++++| ||++++++.+ ...+..
T Consensus        25 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~avk~~~~~~-~~~~~~~~~~E~~~l~~l~h-~~iv~~~~~~~~~~~~~  102 (298)
T 3f66_A           25 LIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRIT-DIGEVSQFLTEGIIMKDFSH-PNVLSLLGICLRSEGSP  102 (298)
T ss_dssp             EEEEEEEEEEEETTEEEEEEEEC-----CEEEEEEEETTCC-SHHHHHHHHHHHHHHHTCCC-TTBCCCCEEECCSSSCC
T ss_pred             eehhhcceeeecCCceEEEEEEecCCCceeEEEEEecccCC-CHHHHHHHHHHHHHHHhCCC-CCEeeeeeEEEcCCCce
Confidence            3466688999999999999986543   3368999887533 23334568999999999998 9999999985 455678


Q ss_pred             EEEEeccCcccHHHHHHh-cCCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          81 ILLLELLTSAVDSKIRES-FGSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        81 ~lv~e~~~~~~L~~~~~~-~~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      +++|||+++++|.+++.. ...+++..+..++.|++.|++|||+.++
T Consensus       103 ~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~ql~~~l~~lH~~~i  149 (298)
T 3f66_A          103 LVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKF  149 (298)
T ss_dssp             EEEEECCTTCBHHHHHHCTTCCCCHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred             EEEEeCCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCc
Confidence            999999999999999875 3568999999999999999999998764

>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*

Probab=99.84  E-value=2.8e-20  Score=122.57  Aligned_cols=119  Identities=18%  Similarity=0.172  Sum_probs=97.7

Q ss_pred             ccccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCc---------hhHHHHHHHHHHHHHhcCCCCceeeeeeeE
Q psy8006           5 KNIISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRST---------DLKAEILHEVAVLEACRCNSRIVQLHQVFE   75 (126)
Q Consensus         5 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~---------~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~   75 (126)
                      .+|...+.||+|+||.||.+.+.. +..+|+|.+.......         .....+.+|+.++..++| |||+++++++.
T Consensus        22 ~~y~~~~~lg~G~~g~V~~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h-~~iv~~~~~~~   99 (362)
T 3pg1_A           22 SPYTVQRFISSGSYGAVCAGVDSE-GIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHH-PNILGLRDIFV   99 (362)
T ss_dssp             CSCEEEEEEEEETTEEEEEEECTT-SCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHHCCC-TTBCCCSEEEE
T ss_pred             cceEEeEEeccCCCEEEEEEECCC-CCeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHhCCC-cCccceeeeEE
Confidence            467788999999999999998865 8999999997643321         123568999999999998 99999999985


Q ss_pred             e-----CCeEEEEEeccCcccHHHHHHh-cCCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          76 S-----SHDMILLLELLTSAVDSKIRES-FGSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        76 ~-----~~~~~lv~e~~~~~~L~~~~~~-~~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      .     ....|+|||+++++ |.+.+.. +..+++..+..++.|++.|+.|||+.++
T Consensus       100 ~~~~~~~~~~~lv~e~~~~~-l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i  155 (362)
T 3pg1_A          100 HFEEPAMHKLYLVTELMRTD-LAQVIHDQRIVISPQHIQYFMYHILLGLHVLHEAGV  155 (362)
T ss_dssp             ECCTTTCCEEEEEEECCSEE-HHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred             eccCCCcceEEEEEccCCCC-HHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCcC
Confidence            3     33689999999965 6666654 4579999999999999999999998764

>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*

Probab=99.84  E-value=7.4e-20  Score=119.74  Aligned_cols=113  Identities=17%  Similarity=0.218  Sum_probs=91.6

Q ss_pred             cccc-eeeccCccceeEEEEEEccCCcEEEEEEeecCCCCchhHHHHHHHHHH-HHHhcCCCCceeeeeeeEe----CCe
Q psy8006           6 NIIS-SIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAV-LEACRCNSRIVQLHQVFES----SHD   79 (126)
Q Consensus         6 ~~~~-~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~-l~~~~~~~~iv~l~~~~~~----~~~   79 (126)
                      +|.. .++||+|+||.||+|.+..++..+|+|.+....       ...+|+.. +..++| ||++++++.+..    ...
T Consensus        29 ~y~i~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~-------~~~~e~~~~~~~~~h-~~i~~~~~~~~~~~~~~~~  100 (336)
T 3fhr_A           29 DYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDSP-------KARQEVDHHWQASGG-PHIVCILDVYENMHHGKRC  100 (336)
T ss_dssp             TEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESSH-------HHHHHHHHHHHHTTS-TTBCCEEEEEEEEETTEEE
T ss_pred             eeEecceeeeeCCCeEEEEEEECCCCCEEEEEEecCcH-------HHHHHHHHHHHhcCC-CChHHHHHHHhhccCCCce
Confidence            4555 567999999999999999999999999996531       22333333 444566 999999999875    446


Q ss_pred             EEEEEeccCcccHHHHHHhcC--CCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          80 MILLLELLTSAVDSKIRESFG--SKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        80 ~~lv~e~~~~~~L~~~~~~~~--~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      .++||||+++++|.+++....  .+++..+..++.|++.|+.|||+.++
T Consensus       101 ~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~ql~~~l~~LH~~~i  149 (336)
T 3fhr_A          101 LLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSHNI  149 (336)
T ss_dssp             EEEEEECCTTEEHHHHHHTC-CCCCBHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred             EEEEEeccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCe
Confidence            899999999999999987643  69999999999999999999998763

>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*

Probab=99.84  E-value=7.9e-20  Score=119.91  Aligned_cols=119  Identities=13%  Similarity=0.200  Sum_probs=101.2

Q ss_pred             cccccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeC-----C
Q psy8006           4 IKNIISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESS-----H   78 (126)
Q Consensus         4 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~-----~   78 (126)
                      .++|...+.||+|+||.||+|.+..++..+|+|.+.... .......+.+|+.++..++| |||+++++++...     .
T Consensus        10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~E~~~l~~l~h-~~iv~~~~~~~~~~~~~~~   87 (353)
T 2b9h_A           10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFD-KPLFALRTLREIKILKHFKH-ENIITIFNIQRPDSFENFN   87 (353)
T ss_dssp             CTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCS-SHHHHHHHHHHHHHHHHCCC-TTBCCEEEECCCSCSTTCC
T ss_pred             ccceEEeeEEcCCCCeEEEEEEECCCCcEEEEEeecccc-cchHHHHHHHHHHHHHhCcC-CCcCCeeeeecccccCccc
Confidence            356888999999999999999999999999999996543 22334468899999999998 9999999987654     5


Q ss_pred             eEEEEEeccCcccHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          79 DMILLLELLTSAVDSKIRESFGSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        79 ~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      ..+++||++++ +|.+++.. ..+++..+..++.|++.|++|||+.++
T Consensus        88 ~~~lv~e~~~~-~L~~~~~~-~~~~~~~~~~~~~qi~~~L~~LH~~~i  133 (353)
T 2b9h_A           88 EVYIIQELMQT-DLHRVIST-QMLSDDHIQYFIYQTLRAVKVLHGSNV  133 (353)
T ss_dssp             CEEEEECCCSE-EHHHHHHH-CCCCHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred             eEEEEEeccCc-cHHHHHhh-cCCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence            78999999985 58888876 569999999999999999999998763

>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*

Probab=99.84  E-value=1.1e-20  Score=122.96  Aligned_cols=118  Identities=15%  Similarity=0.143  Sum_probs=99.4

Q ss_pred             cccccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeEEEE
Q psy8006           4 IKNIISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILL   83 (126)
Q Consensus         4 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~~lv   83 (126)
                      .++|...+.||+|+||.||+|.+ .++..+|+|.+........ ...+.+|+.++..++| |||+++++++..++..++|
T Consensus        29 ~~~y~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~-~~~~~~e~~~l~~l~h-~~iv~~~~~~~~~~~~~lv  105 (326)
T 3uim_A           29 SDNFSNKNILGRGGFGKVYKGRL-ADGTLVAVKRLKEERTQGG-ELQFQTEVEMISMAVH-RNLLRLRGFCMTPTERLLV  105 (326)
T ss_dssp             TTSSCSTTEEECCSSSEEEEECC-SSSCCEEEEECCC-----C-CCHHHHHHHGGGTCCC-TTBCCCCEEECCSSCCEEE
T ss_pred             hhccccceeEecCCCcEEEEEEe-cCCCEEEEEEeccccCchH-HHHHHHHHHHHHhccC-CCccceEEEEecCCceEEE
Confidence            35677888999999999999975 4688999999986543221 2258899999999998 9999999999999999999


Q ss_pred             EeccCcccHHHHHHhcC----CCCHHHHHHHHHHHHHHHHhhhcc
Q psy8006          84 LELLTSAVDSKIRESFG----SKSESGVQNCLEPSISVFSSLSKF  124 (126)
Q Consensus        84 ~e~~~~~~L~~~~~~~~----~~~~~~~~~~~~qi~~~l~~l~~~  124 (126)
                      |||+++++|.+++....    .+++..+..++.|++.|++|||+.
T Consensus       106 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~  150 (326)
T 3uim_A          106 YPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDH  150 (326)
T ss_dssp             EECCTTCBHHHHHHCCSTTCCCCCHHHHHHHHHHHHHHHHHHHHS
T ss_pred             EEeccCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence            99999999999987532    499999999999999999999987

>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*

Probab=99.84  E-value=9.8e-20  Score=118.50  Aligned_cols=118  Identities=16%  Similarity=0.216  Sum_probs=96.9

Q ss_pred             cccccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCchhHHHHHHHHH-HHHHhcCCCCceeeeeeeEeCCeEEE
Q psy8006           4 IKNIISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVA-VLEACRCNSRIVQLHQVFESSHDMIL   82 (126)
Q Consensus         4 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~-~l~~~~~~~~iv~l~~~~~~~~~~~l   82 (126)
                      ..+|...+.||+|+||.||++.+..++..+|+|.+..... ......+.+|+. +++.++| |||+++++.+..++..++
T Consensus        21 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~e~~~~~~~~~h-~niv~~~~~~~~~~~~~l   98 (327)
T 3aln_A           21 AEDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVD-EKEQKQLLMDLDVVMRSSDC-PYIVQFYGALFREGDCWI   98 (327)
T ss_dssp             SCSEEC-CEEEECSSEEEEEEEETTTTEEEEEEEEECCCC-HHHHHHHHHHHHHHHSSCCC-TTBCCEEEEEECSSEEEE
T ss_pred             HHHhhehheeccCCCEEEEEEEEcCCCCEEEEEEeecccC-chHHHHHHHHHHHHHHcCCC-CcEeeeeeEEEeCCceEE
Confidence            3567788899999999999999999999999999986543 223335666666 5556677 999999999999999999


Q ss_pred             EEeccCcccHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHhhhcc
Q psy8006          83 LLELLTSAVDSKIRES-----FGSKSESGVQNCLEPSISVFSSLSKF  124 (126)
Q Consensus        83 v~e~~~~~~L~~~~~~-----~~~~~~~~~~~~~~qi~~~l~~l~~~  124 (126)
                      ||||++++ |.+++..     ...+++..+..++.|++.|+.|||+.
T Consensus        99 v~e~~~~~-l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~  144 (327)
T 3aln_A           99 CMELMSTS-FDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKEN  144 (327)
T ss_dssp             EECCCSEE-HHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             EEeecCCC-hHHHHHHHHhhhcccCcHHHHHHHHHHHHHHHHHHhcc
Confidence            99999975 7666652     46799999999999999999999986

>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B

Probab=99.84  E-value=7.4e-20  Score=118.86  Aligned_cols=121  Identities=17%  Similarity=0.185  Sum_probs=98.5

Q ss_pred             cccccceeeccCccceeEEEEEEc-cCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHh---cCCCCceeeeeeeE----
Q psy8006           4 IKNIISSIINDMGKYATVRRCRDR-KNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEAC---RCNSRIVQLHQVFE----   75 (126)
Q Consensus         4 ~~~~~~~~~lg~g~~~~v~~~~~~-~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~---~~~~~iv~l~~~~~----   75 (126)
                      ...|...+.||+|+||.||++.+. .++..+|+|.+............+.+|+.+++.+   +| |||+++++.+.    
T Consensus        10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h-~~i~~~~~~~~~~~~   88 (326)
T 1blx_A           10 DQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEH-PNVVRLFDVCTVSRT   88 (326)
T ss_dssp             GGTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCC-TTBCCEEEEEEEEEC
T ss_pred             hhceeeeeeecccccEEEEEEEecCCCCEEEEEEEeccCcccccCCchhhHHHHHHHhhhccCC-CCeEeeeeeeeeccc
Confidence            356888999999999999999995 6788999999986543322222466788877776   56 99999999986    


Q ss_pred             -eCCeEEEEEeccCcccHHHHHHhc--CCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          76 -SSHDMILLLELLTSAVDSKIRESF--GSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        76 -~~~~~~lv~e~~~~~~L~~~~~~~--~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                       .....+++||++++ +|.+++...  ..+++..+..++.|++.|+.|||+.++
T Consensus        89 ~~~~~~~lv~e~~~~-~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~gi  141 (326)
T 1blx_A           89 DRETKLTLVFEHVDQ-DLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHRV  141 (326)
T ss_dssp             SSEEEEEEEEECCSC-BHHHHHHHSCTTCSCHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred             CCCceEEEEEecCCC-CHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHCCc
Confidence             45678999999995 688888754  349999999999999999999998764

>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}

Probab=99.84  E-value=1.7e-19  Score=116.69  Aligned_cols=119  Identities=21%  Similarity=0.269  Sum_probs=90.4

Q ss_pred             cccccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeEEEE
Q psy8006           4 IKNIISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILL   83 (126)
Q Consensus         4 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~~lv   83 (126)
                      +.+|...+.||+|+||.||++.+..++..+|+|.+............+..+..++..++| |||+++++.+..++..++|
T Consensus        24 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h-~~i~~~~~~~~~~~~~~lv  102 (318)
T 2dyl_A           24 INDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDC-PYIVQCFGTFITNTDVFIA  102 (318)
T ss_dssp             GGGEEEEEEC------CEEEEEETTTCCEEEEEEEETTSCHHHHHHHHHHHHHHHHTTTC-TTBCCEEEEEECSSEEEEE
T ss_pred             hccccccceeeecCCeeEEEEEEecCCeEEEEEEecccccchHHHHHHHHHHHHHHhcCC-CceeeEEEEEecCCcEEEE
Confidence            567778899999999999999999999999999998765433222234444456666777 9999999999999999999


Q ss_pred             EeccCcccHHHHHHh-cCCCCHHHHHHHHHHHHHHHHhhhcc
Q psy8006          84 LELLTSAVDSKIRES-FGSKSESGVQNCLEPSISVFSSLSKF  124 (126)
Q Consensus        84 ~e~~~~~~L~~~~~~-~~~~~~~~~~~~~~qi~~~l~~l~~~  124 (126)
                      ||+++ +.+..+... ...+++..+..++.|++.|+.|||..
T Consensus       103 ~e~~~-~~~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~  143 (318)
T 2dyl_A          103 MELMG-TCAEKLKKRMQGPIPERILGKMTVAIVKALYYLKEK  143 (318)
T ss_dssp             ECCCS-EEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             EeccC-CcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhh
Confidence            99994 445555543 46799999999999999999999974

>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*

Probab=99.84  E-value=6.9e-20  Score=121.63  Aligned_cols=118  Identities=17%  Similarity=0.173  Sum_probs=97.2

Q ss_pred             ccccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcC-------CCCceeeeeeeE--
Q psy8006           5 KNIISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRC-------NSRIVQLHQVFE--   75 (126)
Q Consensus         5 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~-------~~~iv~l~~~~~--   75 (126)
                      .+|...+.||+|+||.||+|.+..++..+|+|.+...   ......+.+|+.++..+++       |+|++++++.+.  
T Consensus        37 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~~~E~~~l~~l~~~~~~~~~~~~iv~~~~~~~~~  113 (397)
T 1wak_A           37 GRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSA---EHYTETALDEIRLLKSVRNSDPNDPNREMVVQLLDDFKIS  113 (397)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSC---HHHHHHHHHHHHHHHHHHHSCTTCGGGGGBCCEEEEEEEE
T ss_pred             CeEEEEEEeeecCCeeEEEEEecCCCeEEEEEEEecC---CcchHHHHHHHHHHHHHhhcCCCCCCcceeeeeecceeec
Confidence            4577788999999999999999999999999999743   2334468899999999863       378999999987  


Q ss_pred             --eCCeEEEEEeccCcccHHHHHHhc-CCCCHHHHHHHHHHHHHHHHhhhcc-C
Q psy8006          76 --SSHDMILLLELLTSAVDSKIRESF-GSKSESGVQNCLEPSISVFSSLSKF-E  125 (126)
Q Consensus        76 --~~~~~~lv~e~~~~~~L~~~~~~~-~~~~~~~~~~~~~qi~~~l~~l~~~-~  125 (126)
                        .....++|||++.++.+..+.... ..+++..++.++.|++.||+|||+. +
T Consensus       114 ~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~g  167 (397)
T 1wak_A          114 GVNGTHICMVFEVLGHHLLKWIIKSNYQGLPLPCVKKIIQQVLQGLDYLHTKCR  167 (397)
T ss_dssp             ETTEEEEEEEECCCCCBHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred             CCCCceEEEEEeccCccHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHhCC
Confidence              455799999999776445555443 4699999999999999999999986 5

>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}

Probab=99.83  E-value=2e-20  Score=122.72  Aligned_cols=120  Identities=11%  Similarity=-0.008  Sum_probs=94.4

Q ss_pred             ccccceeeccCccceeEEEEEEcc---CCcEEEEEEeecCCCCch---------hHHHHHHHHHHHHHhcCCCCceeeee
Q psy8006           5 KNIISSIINDMGKYATVRRCRDRK---NGTQYAAKFLRKKRRSTD---------LKAEILHEVAVLEACRCNSRIVQLHQ   72 (126)
Q Consensus         5 ~~~~~~~~lg~g~~~~v~~~~~~~---~~~~~aiK~~~~~~~~~~---------~~~~~~~e~~~l~~~~~~~~iv~l~~   72 (126)
                      .+|...+.||+|+||.||+|.+..   ++..+|+|.+........         ....+.+|+..+..++| |||+++++
T Consensus        37 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h-~ni~~~~~  115 (345)
T 2v62_A           37 NQWVLGKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQLDY-LGIPLFYG  115 (345)
T ss_dssp             CEEEEEEEC------CEEEEEESSSCGGGCCEEEEEEECC-CHHHHHHHHHHHHCCHHHHHHHHHHHTCSC-CCCCCEEE
T ss_pred             ceEEEEeeEeecCCeEEEEEEecCCCCccceEEEEeeecCCcchHHHHHHHHHHhhhHHHHHHHhhccccc-cCcceeec
Confidence            467888999999999999999987   788999999986532110         01135677788888888 99999999


Q ss_pred             eeEe----CCeEEEEEeccCcccHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          73 VFES----SHDMILLLELLTSAVDSKIRESFGSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        73 ~~~~----~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      .+..    ....|+|||++ +++|.+++.....+++..+..++.|++.|++|||+.++
T Consensus       116 ~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~~i  172 (345)
T 2v62_A          116 SGLTEFKGRSYRFMVMERL-GIDLQKISGQNGTFKKSTVLQLGIRMLDVLEYIHENEY  172 (345)
T ss_dssp             EEEEESSSCEEEEEEEECE-EEEHHHHCBGGGBCCHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred             ccccccCCCcEEEEEEecc-CCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCe
Confidence            9887    67899999999 88899999876789999999999999999999998763

>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A

Probab=99.83  E-value=3.1e-19  Score=114.48  Aligned_cols=118  Identities=13%  Similarity=0.032  Sum_probs=98.4

Q ss_pred             cccccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeEEEE
Q psy8006           4 IKNIISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILL   83 (126)
Q Consensus         4 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~~lv   83 (126)
                      .++|...+.||+|+||.||+|.+..++..+|+|.+......    ..+.+|+.++..++|++++..+..........+++
T Consensus         8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~----~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv   83 (296)
T 3uzp_A            8 GNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKH----PQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMV   83 (296)
T ss_dssp             TTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEESCSSC----CHHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEE
T ss_pred             ccEEEEEEEEccCCCeEEEEEEEcCCCcEEEEEEecCCcch----hHHHHHHHHHHHhhcCCCCCccccccCCCCceEEE
Confidence            35688899999999999999999999999999998765432    25789999999999844455555555677789999


Q ss_pred             EeccCcccHHHHHHh-cCCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          84 LELLTSAVDSKIRES-FGSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        84 ~e~~~~~~L~~~~~~-~~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      |||+ +++|.+++.. ...+++..+..++.|++.|++|||+.++
T Consensus        84 ~e~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i  126 (296)
T 3uzp_A           84 MELL-GPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSKNF  126 (296)
T ss_dssp             EECC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred             EEec-CCCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHhCCe
Confidence            9999 7789988873 4579999999999999999999998763

>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*

Probab=99.83  E-value=4.2e-20  Score=117.79  Aligned_cols=116  Identities=17%  Similarity=0.156  Sum_probs=97.6

Q ss_pred             cccccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEe-CCeEEE
Q psy8006           4 IKNIISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFES-SHDMIL   82 (126)
Q Consensus         4 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~-~~~~~l   82 (126)
                      .++|...+.||+|+||.||++.+.  +..+|+|.+....    ..+.+.+|+.++..++| ||++++++.+.. .+..++
T Consensus        20 ~~~y~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~----~~~~~~~E~~~l~~l~h-~~iv~~~~~~~~~~~~~~l   92 (278)
T 1byg_A           20 MKELKLLQTIGKGEFGDVMLGDYR--GNKVAVKCIKNDA----TAQAFLAEASVMTQLRH-SNLVQLLGVIVEEKGGLYI   92 (278)
T ss_dssp             GGGEEEEEEEEECSSCEEEEEEET--TEEEEEEECCCCC------HHHHHTHHHHTTCCC-TTBCCEEEEECCC--CCEE
T ss_pred             hhhceEEeEEecCCCceEEEEEEc--CCEEEEEEecchh----HHHHHHHHHHHHHhCCC-CCEeeEEEEEEcCCCceEE
Confidence            467888999999999999999874  7889999987542    23468899999999998 999999998654 447899


Q ss_pred             EEeccCcccHHHHHHhcC--CCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          83 LLELLTSAVDSKIRESFG--SKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        83 v~e~~~~~~L~~~~~~~~--~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      +||++++++|.+++....  .+++..+..++.|++.|++|||+.++
T Consensus        93 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i  138 (278)
T 1byg_A           93 VTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNF  138 (278)
T ss_dssp             EECCCTTEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred             EEecCCCCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHhCCc
Confidence            999999999999887543  38999999999999999999998764

>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}

Probab=99.83  E-value=5.3e-20  Score=120.97  Aligned_cols=113  Identities=11%  Similarity=0.016  Sum_probs=95.3

Q ss_pred             ccccceeeccCccceeEEEEEEcc--------CCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCcee-------
Q psy8006           5 KNIISSIINDMGKYATVRRCRDRK--------NGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQ-------   69 (126)
Q Consensus         5 ~~~~~~~~lg~g~~~~v~~~~~~~--------~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~-------   69 (126)
                      ++|...+.||+|+||.||+|.+..        .+..+|+|.+....       .+.+|+.++..++| ||+++       
T Consensus        42 ~~y~~~~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~~-------~~~~E~~~l~~l~h-~niv~~~~~~~~  113 (352)
T 2jii_A           42 RQWKLKSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKDG-------RLFNEQNFFQRAAK-PLQVNKWKKLYS  113 (352)
T ss_dssp             CEEEEEEEEEEETTEEEEEEEECC-----------CEEEEEEETTS-------THHHHHHHHHHHCC-HHHHHHHHHHTT
T ss_pred             CeEEEEEEecCCCCeEEEEEeecCCccccccccCceEEEEEecccc-------hHHHHHHHHHHhcc-cchhhhhhhhcc
Confidence            578888999999999999999987        47899999997541       57789999999988 88887       


Q ss_pred             --------eeeeeEe-CCeEEEEEeccCcccHHHHHHhc--CCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          70 --------LHQVFES-SHDMILLLELLTSAVDSKIRESF--GSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        70 --------l~~~~~~-~~~~~lv~e~~~~~~L~~~~~~~--~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                              +++.+.. ....++||||+ +++|.+++...  ..+++..+..++.|++.|++|||+.++
T Consensus       114 ~~~~~i~~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~i  180 (352)
T 2jii_A          114 TPLLAIPTCMGFGVHQDKYRFLVLPSL-GRSLQSALDVSPKHVLSERSVLQVACRLLDALEFLHENEY  180 (352)
T ss_dssp             CTTCSCCCCCEEEEETTTEEEEEEECC-CEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred             CCccCccchhhccccCCcEEEEEecCC-CcCHHHHHHhCCcCCCCHHHHHHHHHHHHHHHHHHHhCCc
Confidence                    5556654 67899999999 88899999865  679999999999999999999998764

>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}

Probab=99.83  E-value=1.9e-19  Score=117.40  Aligned_cols=120  Identities=17%  Similarity=0.107  Sum_probs=100.3

Q ss_pred             cccccceeeccCccceeEEEEEEccCCcEE----EEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCe
Q psy8006           4 IKNIISSIINDMGKYATVRRCRDRKNGTQY----AAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHD   79 (126)
Q Consensus         4 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~----aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~   79 (126)
                      ..+|...+.||+|+||.||+|.+..++..+    ++|.+.... .......+.+|+.++..++| |||+++++++..+. 
T Consensus        14 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~iK~~~~~~-~~~~~~~~~~E~~~l~~l~h-p~iv~~~~~~~~~~-   90 (327)
T 3lzb_A           14 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREAT-SPKANKEILDEAYVMASVDN-PHVCRLLGICLTST-   90 (327)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEECCTTCSCCEEEEEEEECCCS-SCCCHHHHHHHHHHHTTCCB-TTBCCCCEEEESSS-
T ss_pred             HhHceEEEEeeeCCCeEEEEEEEcCCCceEEEEEEEEeecccc-CHHHHHHHHHHHHHHHhCCC-CCeeEEEEEEecCC-
Confidence            356778899999999999999998877754    667665433 23345578999999999998 99999999998655 


Q ss_pred             EEEEEeccCcccHHHHHHh-cCCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          80 MILLLELLTSAVDSKIRES-FGSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        80 ~~lv~e~~~~~~L~~~~~~-~~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      .+++++++.+++|.+++.. ...+++..+..++.|++.|+.|||+.++
T Consensus        91 ~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~i  138 (327)
T 3lzb_A           91 VQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRL  138 (327)
T ss_dssp             EEEEECCCSSCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred             ceEEEEecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhCCC
Confidence            7889999999999888875 4579999999999999999999998764

>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}

Probab=99.83  E-value=7.2e-20  Score=122.37  Aligned_cols=111  Identities=19%  Similarity=0.207  Sum_probs=87.2

Q ss_pred             eeeccCccceeEEEEEEc--cCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEe--CCeEEEEEe
Q psy8006          10 SIINDMGKYATVRRCRDR--KNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFES--SHDMILLLE   85 (126)
Q Consensus        10 ~~~lg~g~~~~v~~~~~~--~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~--~~~~~lv~e   85 (126)
                      ++.||+|+||.||+|.+.  .++..+|+|.+......    ..+.+|+.++..++| |||+++++++..  ....++|||
T Consensus        26 g~~lG~G~~g~Vy~~~~~~~~~~~~vaiK~~~~~~~~----~~~~~E~~~l~~l~h-pniv~~~~~~~~~~~~~~~lv~e  100 (405)
T 3rgf_A           26 GCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTGIS----MSACREIALLRELKH-PNVISLQKVFLSHADRKVWLLFD  100 (405)
T ss_dssp             SCCCC-----EEEEEEESSSSCCCCEEEEECSSSSCC----HHHHHHHHHHHHCCC-TTBCCCCEEEEETTTTEEEEEEE
T ss_pred             CcEeeecCCeEEEEEEEccCCCCeEEEEEEECCCCCC----HHHHHHHHHHHhcCC-CCeeeEeeEEecCCCCeEEEEEe
Confidence            668999999999999965  56889999999765432    257899999999998 999999999954  668999999


Q ss_pred             ccCcccHHHHHHhc---------CCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          86 LLTSAVDSKIRESF---------GSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        86 ~~~~~~L~~~~~~~---------~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      |++++ |.+++...         ..+++..++.++.|++.||+|||+.++
T Consensus       101 ~~~~~-l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~i  149 (405)
T 3rgf_A          101 YAEHD-LWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANWV  149 (405)
T ss_dssp             CCSEE-HHHHHHHHHHHC-------CCHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred             CCCCC-HHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHhCCE
Confidence            99875 66665421         249999999999999999999998764

>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A

Probab=99.83  E-value=1.8e-19  Score=118.96  Aligned_cols=120  Identities=8%  Similarity=-0.004  Sum_probs=92.3

Q ss_pred             ccccceeeccCccceeEEEEEEccC-----CcEEEEEEeecCCCCchh---------HHHHHHHHHHHHHhcCCCCceee
Q psy8006           5 KNIISSIINDMGKYATVRRCRDRKN-----GTQYAAKFLRKKRRSTDL---------KAEILHEVAVLEACRCNSRIVQL   70 (126)
Q Consensus         5 ~~~~~~~~lg~g~~~~v~~~~~~~~-----~~~~aiK~~~~~~~~~~~---------~~~~~~e~~~l~~~~~~~~iv~l   70 (126)
                      .+|...+.||+|+||.||+|.+..+     +..+|+|.+.........         ......|+..+..++| |||+++
T Consensus        35 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h-~~iv~~  113 (364)
T 3op5_A           35 AAWKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRTRKLKY-LGVPKY  113 (364)
T ss_dssp             CEEEEEEECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTCHHHHHHHHHHHHHCCHHHHHHHHHHTTCSC-CCSCCE
T ss_pred             CeEEEEEEEecCCCeEEEEeeecCccccccccceEEEEeeccchhHHHHHHHHHhhhhhHHHHHHHHHhhccC-CCCCeE
Confidence            4688889999999999999998764     578999998765311000         0012334445556667 999999


Q ss_pred             eeeeEeC----CeEEEEEeccCcccHHHHHHhc-CCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          71 HQVFESS----HDMILLLELLTSAVDSKIRESF-GSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        71 ~~~~~~~----~~~~lv~e~~~~~~L~~~~~~~-~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      ++.+...    ...++||||+ +++|.+++... ..+++..+..++.|++.||+|||+.++
T Consensus       114 ~~~~~~~~~~~~~~~lv~e~~-g~~L~~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~i  173 (364)
T 3op5_A          114 WGSGLHDKNGKSYRFMIMDRF-GSDLQKIYEANAKRFSRKTVLQLSLRILDILEYIHEHEY  173 (364)
T ss_dssp             EEEEEEEETTEEEEEEEEECE-EEEHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred             EeeeeeccCCcceEEEEEeCC-CCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence            9998754    4689999999 88899998765 579999999999999999999998763

>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}

Probab=99.83  E-value=3e-20  Score=131.17  Aligned_cols=118  Identities=15%  Similarity=0.107  Sum_probs=97.7

Q ss_pred             ccccceeeccCccceeEEEEEEcc-CCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCe----
Q psy8006           5 KNIISSIINDMGKYATVRRCRDRK-NGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHD----   79 (126)
Q Consensus         5 ~~~~~~~~lg~g~~~~v~~~~~~~-~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~----   79 (126)
                      .+|...+.||+|+||.||++.+.. +++.||+|.+.... .......+.+|+.++..++| |||+++++++...+.    
T Consensus        80 ~~y~i~~~lg~G~~g~Vy~a~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~E~~~l~~l~h-p~iv~~~~~~~~~~~~~~~  157 (681)
T 2pzi_A           80 GQYEVKGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHSG-DAEAQAMAMAERQFLAEVVH-PSIVQIFNFVEHTDRHGDP  157 (681)
T ss_dssp             TTEEEEEEEEEETTEEEEEEEEGGGTTEEEEEEESCSSC-CHHHHHHHHHHHGGGGGCCC-TTBCCEEEEEEEECTTSCE
T ss_pred             CceEEEEEEeeCCCeEEEEEEEcCCCCcEEEEEEeCccC-CHHHHHHHHHHHHHHHhcCC-CCcCeEeeeEeecCCCCCc
Confidence            457778899999999999999976 78999999887543 22334468899999999998 999999999986654    


Q ss_pred             -EEEEEeccCcccHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          80 -MILLLELLTSAVDSKIRESFGSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        80 -~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                       .|+||||+++++|.+++..  .+++..+..++.|++.++.|||+.++
T Consensus       158 ~~~lv~E~~~g~~L~~~~~~--~l~~~~~~~~~~qi~~aL~~lH~~gi  203 (681)
T 2pzi_A          158 VGYIVMEYVGGQSLKRSKGQ--KLPVAEAIAYLLEILPALSYLHSIGL  203 (681)
T ss_dssp             EEEEEEECCCCEECC----C--CCCHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred             eeEEEEEeCCCCcHHHHHhC--CCCHHHHHHHHHHHHHHHHHHHHCCC
Confidence             7999999999999887765  68999999999999999999998763

>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*

Probab=99.83  E-value=2e-19  Score=117.13  Aligned_cols=118  Identities=18%  Similarity=0.186  Sum_probs=98.6

Q ss_pred             ccccceeeccCccceeEEEEEE-ccCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcC-----CCCceeeeeeeEeCC
Q psy8006           5 KNIISSIINDMGKYATVRRCRD-RKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRC-----NSRIVQLHQVFESSH   78 (126)
Q Consensus         5 ~~~~~~~~lg~g~~~~v~~~~~-~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~-----~~~iv~l~~~~~~~~   78 (126)
                      ..|...+.||+|+||.||+|.+ ..++..+|+|.+...   ......+.+|+.++..++|     +++++++++.+...+
T Consensus        14 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~---~~~~~~~~~e~~~l~~l~~~~~~~~~~i~~~~~~~~~~~   90 (339)
T 1z57_A           14 ARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNV---DRYCEAARSEIQVLEHLNTTDPNSTFRCVQMLEWFEHHG   90 (339)
T ss_dssp             TTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSS---HHHHHHHHHHHHHHHHHHHHCTTCTTCBCCEEEEEEETT
T ss_pred             CceEEEEEEecCCCeEEEEEEecCCCCcEEEEEEEecC---CchhHHHHHHHHHHHHhhhcCCCCceeeEeeecccccCC
Confidence            3577889999999999999998 567889999999743   2334468899999988876     135899999999999


Q ss_pred             eEEEEEeccCcccHHHHHHhcC--CCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          79 DMILLLELLTSAVDSKIRESFG--SKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        79 ~~~lv~e~~~~~~L~~~~~~~~--~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      ..++|||++ +++|.+++....  .+++..+..++.|++.|++|||+.++
T Consensus        91 ~~~lv~e~~-~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i  139 (339)
T 1z57_A           91 HICIVFELL-GLSTYDFIKENGFLPFRLDHIRKMAYQICKSVNFLHSNKL  139 (339)
T ss_dssp             EEEEEEECC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred             cEEEEEcCC-CCCHHHHHHhcCCCCCcHHHHHHHHHHHHHHHHHHHHCCC
Confidence            999999999 666888887654  68999999999999999999998763

>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}

Probab=99.83  E-value=6.8e-21  Score=123.43  Aligned_cols=119  Identities=11%  Similarity=0.098  Sum_probs=101.9

Q ss_pred             cccccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeEEEE
Q psy8006           4 IKNIISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILL   83 (126)
Q Consensus         4 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~~lv   83 (126)
                      ..+|...+.||+|+||.||+|.+..   .+|+|.+............+.+|+.++..++| ||++++++.+..++..+++
T Consensus        32 ~~~~~~~~~lg~G~~g~V~~~~~~~---~~avk~~~~~~~~~~~~~~~~~e~~~l~~l~h-~~iv~~~~~~~~~~~~~iv  107 (319)
T 2y4i_B           32 FEQLEIGELIGKGRFGQVYHGRWHG---EVAIRLIDIERDNEDQLKAFKREVMAYRQTRH-ENVVLFMGACMSPPHLAII  107 (319)
T ss_dssp             CSCEECCCBCCCSSSSEEEEEEESS---SEEEEECCCCSCCCCCCCCCCTTGGGGTTCCC-TTBCCCCEEEECSSCEEEE
T ss_pred             HHHeEEeeEeccCCceEEEEEEEcC---eEEEEEeecCCCCHHHHHHHHHHHHHHhcCCC-CCEeEEEEEEecCCceEEE
Confidence            3567788999999999999998854   48999998654433333357789999999998 9999999999999999999


Q ss_pred             EeccCcccHHHHHHhcC-CCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          84 LELLTSAVDSKIRESFG-SKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        84 ~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      |||+++++|.+++.... .+++..+..++.|++.|++|||+.++
T Consensus       108 ~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~~i  151 (319)
T 2y4i_B          108 TSLCKGRTLYSVVRDAKIVLDVNKTRQIAQEIVKGMGYLHAKGI  151 (319)
T ss_dssp             CBCCCSEEHHHHTTSSCCCCCSHHHHHHHHHHHHHHHHHHHTTC
T ss_pred             eecccCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCc
Confidence            99999999999997644 69999999999999999999998764

>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*

Probab=99.82  E-value=4.2e-19  Score=119.63  Aligned_cols=117  Identities=16%  Similarity=0.198  Sum_probs=98.7

Q ss_pred             cccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcC-----CCCceeeeeeeEeCCeE
Q psy8006           6 NIISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRC-----NSRIVQLHQVFESSHDM   80 (126)
Q Consensus         6 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~-----~~~iv~l~~~~~~~~~~   80 (126)
                      .|...+.||+|+||.||+|.+..++..||+|.+...   ......+.+|+.++..+++     ++|++++++.+...+..
T Consensus        98 ry~~~~~LG~G~fg~V~~a~~~~~~~~vAvK~~~~~---~~~~~~~~~E~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~  174 (429)
T 3kvw_A           98 RYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNE---KRFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTFRNHI  174 (429)
T ss_dssp             TEEEEEEEEESSSEEEEEEEETTTTEEEEEEEECSC---HHHHHHHHHHHHHHHHHHTTCTTSCSCBCCEEEEEEETTEE
T ss_pred             cEEEEEEcccCccEEEEEEEECCCCcEEEEEEECCc---cchHHHHHHHHHHHHHHhhccccCCcCEEEEEeecccCCeE
Confidence            467788999999999999999999999999999753   2233457888888888743     37999999999999999


Q ss_pred             EEEEeccCcccHHHHHHhcC--CCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          81 ILLLELLTSAVDSKIRESFG--SKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        81 ~lv~e~~~~~~L~~~~~~~~--~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      +++||++++ +|.+++....  .+++..++.++.|++.||+|||+.++
T Consensus       175 ~lv~e~~~~-~L~~~l~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~i  221 (429)
T 3kvw_A          175 CMTFELLSM-NLYELIKKNKFQGFSLPLVRKFAHSILQCLDALHKNRI  221 (429)
T ss_dssp             EEEECCCCC-BHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHHTE
T ss_pred             EEEEeccCC-CHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence            999999986 5888776543  59999999999999999999998753

>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*

Probab=99.82  E-value=3.2e-20  Score=120.88  Aligned_cols=119  Identities=12%  Similarity=0.066  Sum_probs=98.1

Q ss_pred             ccccceeeccCccceeEEEEEEccCCcE----EEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeE
Q psy8006           5 KNIISSIINDMGKYATVRRCRDRKNGTQ----YAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDM   80 (126)
Q Consensus         5 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~----~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~   80 (126)
                      .+|...+.||+|+||.||+|.+..++..    +++|.+..... ......+.+|+.++..++| |||+++++++. .+..
T Consensus        13 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~~K~~~~~~~-~~~~~~~~~e~~~l~~l~h-~~iv~~~~~~~-~~~~   89 (325)
T 3kex_A           13 TELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSG-RQSFQAVTDHMLAIGSLDH-AHIVRLLGLCP-GSSL   89 (325)
T ss_dssp             TTEEEEEEEECCSSCEEEEEEECCTTCSCCEEEEEEEECCTTS-CSCBCSCCHHHHHHHTCCC-TTBCCEEEEEC-BSSE
T ss_pred             hHceeeeeeeecCCceEEEEEEcCCCceEEEEEEEEecccccc-HHHHHHHHHHHHHHhcCCC-CCcCeEEEEEc-CCcc
Confidence            4677789999999999999999887765    77777754332 1222346789999999998 99999999885 5568


Q ss_pred             EEEEeccCcccHHHHHHhc-CCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          81 ILLLELLTSAVDSKIRESF-GSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        81 ~lv~e~~~~~~L~~~~~~~-~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      ++||||+.+++|.+++... ..+++..+..++.|++.|++|||+.++
T Consensus        90 ~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i  136 (325)
T 3kex_A           90 QLVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQIAKGMYYLEEHGM  136 (325)
T ss_dssp             EEEEECCTTCBSHHHHHSSGGGSCTTHHHHHHHHHHHHHHHHHHTTC
T ss_pred             EEEEEeCCCCCHHHHHHHccccCCHHHHHHHHHHHHHHHHHHHhCCC
Confidence            8999999999998888753 579999999999999999999998764

>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...

Probab=99.82  E-value=2.8e-19  Score=120.14  Aligned_cols=113  Identities=15%  Similarity=0.164  Sum_probs=93.5

Q ss_pred             cccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeC------Ce
Q psy8006           6 NIISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESS------HD   79 (126)
Q Consensus         6 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~------~~   79 (126)
                      .|...+.||+|+||.||+|.+..++..||+|.+.....      ...+|+.+++.++| |||+++++++...      .+
T Consensus        55 ~y~~~~~lG~G~fg~Vy~~~~~~~~~~vaiK~~~~~~~------~~~~E~~il~~l~h-pniv~l~~~~~~~~~~~~~~~  127 (420)
T 1j1b_A           55 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKR------FKNRELQIMRKLDH-CNIVRLRYFFYSSGEKKDEVY  127 (420)
T ss_dssp             EEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECCTT------SCCHHHHHHHTCCC-TTBCCEEEEEEEEETTTTEEE
T ss_pred             eEEeeeEEeeCCCEEEEEEEECCCCcEEEEEEecccch------hHHHHHHHHHHcCC-CCccceeeEEeccCCCCccee
Confidence            47778899999999999999999999999999975432      23479999999998 9999999888532      24


Q ss_pred             EEEEEeccCcccHHHHHH----hcCCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          80 MILLLELLTSAVDSKIRE----SFGSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        80 ~~lv~e~~~~~~L~~~~~----~~~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      +++||||++++ +.+++.    .+..+++..++.++.|++.||+|||+.++
T Consensus       128 ~~lv~e~~~~~-l~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~i  177 (420)
T 1j1b_A          128 LNLVLDYVPET-VYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGI  177 (420)
T ss_dssp             EEEEEECCCEE-HHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTTTE
T ss_pred             EEeehhccccc-HHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCc
Confidence            77999999986 554443    34679999999999999999999998763

>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A

Probab=99.82  E-value=4.6e-19  Score=113.62  Aligned_cols=117  Identities=13%  Similarity=0.044  Sum_probs=95.2

Q ss_pred             ccccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeEEEEE
Q psy8006           5 KNIISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLL   84 (126)
Q Consensus         5 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~~lv~   84 (126)
                      ++|...+.||+|+||.||+|.+..++..+|+|.+.......    .+.+|+.++..++|++++..+..........+++|
T Consensus         9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~----~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~   84 (296)
T 4hgt_A            9 NRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKHP----QLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVM   84 (296)
T ss_dssp             --CEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEC---CC----CHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEE
T ss_pred             CceEEeeeecCCCCeEEEEEEEcCCCceEEEEeecccccch----HHHHHHHHHHHhcCCCCCCeeeeecCCCCceEEEE
Confidence            56888999999999999999999999999999876553321    47789999999998445555555557778899999


Q ss_pred             eccCcccHHHHHHh-cCCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          85 ELLTSAVDSKIRES-FGSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        85 e~~~~~~L~~~~~~-~~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      |++ +++|.+++.. ...+++..+..++.|++.|+.|||+.++
T Consensus        85 e~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~i  126 (296)
T 4hgt_A           85 ELL-GPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSKNF  126 (296)
T ss_dssp             ECC-CCBHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred             Ecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence            999 7789988874 4579999999999999999999998763

>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}

Probab=99.82  E-value=3.1e-19  Score=115.47  Aligned_cols=112  Identities=13%  Similarity=0.116  Sum_probs=96.2

Q ss_pred             ccccccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeEEE
Q psy8006           3 NIKNIISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMIL   82 (126)
Q Consensus         3 ~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~~l   82 (126)
                      +.++|...+.||+|+||.||++.+.  +..+|+|.+...    .....+.+|+.++.+++| |||+++++.+.  +..++
T Consensus         6 ~~~~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~----~~~~~~~~E~~~l~~l~h-p~iv~~~~~~~--~~~~l   76 (307)
T 2eva_A            6 DYKEIEVEEVVGRGAFGVVCKAKWR--AKDVAIKQIESE----SERKAFIVELRQLSRVNH-PNIVKLYGACL--NPVCL   76 (307)
T ss_dssp             CGGGEEEEEEEECCSSSEEEEEEET--TEEEEEEECSST----THHHHHHHHHHHHHHCCC-TTBCCEEEBCT--TTTEE
T ss_pred             CHhHeeeeeEeecCCCceEEEEEEC--CeeEEEEEecCh----hHHHHHHHHHHHHhcCCC-CCcCeEEEEEc--CCcEE
Confidence            3567888999999999999999874  678999998643    234568999999999998 99999999876  34789


Q ss_pred             EEeccCcccHHHHHHhcC---CCCHHHHHHHHHHHHHHHHhhhc
Q psy8006          83 LLELLTSAVDSKIRESFG---SKSESGVQNCLEPSISVFSSLSK  123 (126)
Q Consensus        83 v~e~~~~~~L~~~~~~~~---~~~~~~~~~~~~qi~~~l~~l~~  123 (126)
                      ||||+++++|.+++....   .++...+..++.|++.|++|||+
T Consensus        77 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~  120 (307)
T 2eva_A           77 VMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHS  120 (307)
T ss_dssp             EEECCTTCBHHHHHHCSSSEECCCHHHHHHHHHHHHHHHHHHHT
T ss_pred             EEEcCCCCCHHHHHhccCCCCccCHHHHHHHHHHHHHHHHHHHh
Confidence            999999999999997644   47889999999999999999998

>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7

Probab=99.82  E-value=1.1e-19  Score=120.55  Aligned_cols=118  Identities=10%  Similarity=0.042  Sum_probs=97.2

Q ss_pred             ccceeeccCccceeEEEEEEccCC---cEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeE-eCCeEEE
Q psy8006           7 IISSIINDMGKYATVRRCRDRKNG---TQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFE-SSHDMIL   82 (126)
Q Consensus         7 ~~~~~~lg~g~~~~v~~~~~~~~~---~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~-~~~~~~l   82 (126)
                      |...+.||+|+||.||+|....++   ..+|+|.+.... .......+.+|+.++.+++| |||+++++++. ..+..++
T Consensus        91 ~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~il~~l~h-pnIv~~~~~~~~~~~~~~l  168 (373)
T 3c1x_A           91 VHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRIT-DIGEVSQFLTEGIIMKDFSH-PNVLSLLGICLRSEGSPLV  168 (373)
T ss_dssp             EEEEEEEECCSSSEEEEEEEEETTTEEEEEEEEECCSCS-CSHHHHHHHHHHTTSTTCCC-TTBCCCCEEECCCSSCCEE
T ss_pred             eecCcEeeeCCCeEEEEEEEECCCCcEEEEEEEEcCCCC-CHHHHHHHHHHHHHHHhCCC-CCcceEEEEEEcCCCCeEE
Confidence            445678999999999999875433   368999887532 23345579999999999998 99999999864 4567899


Q ss_pred             EEeccCcccHHHHHHhc-CCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          83 LLELLTSAVDSKIRESF-GSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        83 v~e~~~~~~L~~~~~~~-~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      ||||+++++|.+++... ..+++..+..++.|++.|++|||+.++
T Consensus       169 v~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~i  213 (373)
T 3c1x_A          169 VLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKKF  213 (373)
T ss_dssp             EEECCTTCBHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred             EEECCCCCCHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHHCCE
Confidence            99999999999999754 468899999999999999999998764

>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}

Probab=99.82  E-value=5e-19  Score=120.80  Aligned_cols=117  Identities=11%  Similarity=0.047  Sum_probs=100.8

Q ss_pred             ccccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeEEEEE
Q psy8006           5 KNIISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLL   84 (126)
Q Consensus         5 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~~lv~   84 (126)
                      ++|...+.||+|+||.||+|.+..++..||+|++.......    .+.+|+.++..+++++++..+..+.......++||
T Consensus         7 ~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~~~----~~~~E~~il~~L~~~~~i~~i~~~~~~~~~~~lvm   82 (483)
T 3sv0_A            7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKHP----QLLYESKIYRILQGGTGIPNVRWFGVEGDYNVLVM   82 (483)
T ss_dssp             TTEECCCCCEECSSCEEEEEEETTTCCEEEEEEEETTCSSC----CHHHHHHHHHHTTTSTTCCCEEEEEEETTEEEEEE
T ss_pred             CcEEEEEEEeeCCCEEEEEEEECCCCcEEEEEEeccccccH----HHHHHHHHHHHhcCCCCCCeEEEEEeeCCEEEEEE
Confidence            46888999999999999999999999999999887654322    47789999999998677777777777888999999


Q ss_pred             eccCcccHHHHHHh-cCCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          85 ELLTSAVDSKIRES-FGSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        85 e~~~~~~L~~~~~~-~~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      ||+ +++|.+++.. ...+++..++.++.|++.||+|||+.++
T Consensus        83 e~~-g~sL~~ll~~~~~~l~~~~~~~i~~qi~~aL~yLH~~gI  124 (483)
T 3sv0_A           83 DLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSF  124 (483)
T ss_dssp             ECC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred             ECC-CCCHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHCCE
Confidence            999 7779998874 4679999999999999999999998763

>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*

Probab=99.82  E-value=1.7e-19  Score=115.41  Aligned_cols=121  Identities=16%  Similarity=0.096  Sum_probs=92.1

Q ss_pred             cccccceeeccCccceeEEEEEEcc-CCc--EEEEEEeecCCCCc-hhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCe
Q psy8006           4 IKNIISSIINDMGKYATVRRCRDRK-NGT--QYAAKFLRKKRRST-DLKAEILHEVAVLEACRCNSRIVQLHQVFESSHD   79 (126)
Q Consensus         4 ~~~~~~~~~lg~g~~~~v~~~~~~~-~~~--~~aiK~~~~~~~~~-~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~   79 (126)
                      .++|...+.||+|+||.||+|.+.. ++.  .+|+|.+....... .....+.+|+.++..++| ||++++++.+..+. 
T Consensus        17 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h-~~i~~~~~~~~~~~-   94 (291)
T 1u46_A           17 EKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDH-RNLIRLYGVVLTPP-   94 (291)
T ss_dssp             GGGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCC-TTBCCEEEEECSSS-
T ss_pred             hhHeeeeeeecCCCceeEEEEEeccCCCceeEEEEEEEccCccCCHHHHHHHHHHHHHHHhCCC-CCcccEEEEEccCC-
Confidence            4568888999999999999998643 333  68999998654422 334568999999999998 99999999987655 


Q ss_pred             EEEEEeccCcccHHHHHHh-cCCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          80 MILLLELLTSAVDSKIRES-FGSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        80 ~~lv~e~~~~~~L~~~~~~-~~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      .++++|++++++|.+++.. ...+++..+..++.|++.|+.|||+.++
T Consensus        95 ~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i  142 (291)
T 1u46_A           95 MKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKRF  142 (291)
T ss_dssp             CEEEEECCTTCBHHHHHHHHGGGSCHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred             ceeeEecccCCCHHHHHHhccCCcCHHHHHHHHHHHHHHHHHHHhCCc
Confidence            8899999999999888865 3579999999999999999999998763

>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}

Probab=99.82  E-value=5e-19  Score=116.36  Aligned_cols=120  Identities=15%  Similarity=0.158  Sum_probs=86.3

Q ss_pred             ccccccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCC----
Q psy8006           3 NIKNIISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSH----   78 (126)
Q Consensus         3 ~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~----   78 (126)
                      .+++|...+.||+|+||.||+|.+..++..+|+|.+.......   ....+++..+..++| |||+++++++...+    
T Consensus        21 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~---~~~~~~~~~l~~l~h-~niv~~~~~~~~~~~~~~   96 (360)
T 3e3p_A           21 EMDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDPRFR---NRELQIMQDLAVLHH-PNIVQLQSYFYTLGERDR   96 (360)
T ss_dssp             HHTTEEEC----------CEEEEETTTCCEEEEEEEECCTTCC---CHHHHHHHHHHHHCC-TTBCCEEEEEEEECSSCT
T ss_pred             hccceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEecCcccc---HHHHHHHHHHHhcCC-CCcccHHHhhhccccccc
Confidence            3567888999999999999999999999999999987643322   245667777888888 99999999986543    


Q ss_pred             ---eEEEEEeccCcccHHH---HHHhcCCCCHHHHHHHHHHHHHHHHhhh--ccCC
Q psy8006          79 ---DMILLLELLTSAVDSK---IRESFGSKSESGVQNCLEPSISVFSSLS--KFET  126 (126)
Q Consensus        79 ---~~~lv~e~~~~~~L~~---~~~~~~~~~~~~~~~~~~qi~~~l~~l~--~~~~  126 (126)
                         ..++||||++++.+..   .......+++..+..++.|++.|+.|||  +.++
T Consensus        97 ~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~~~i  152 (360)
T 3e3p_A           97 RDIYLNVVMEYVPDTLHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGCLHLPSVNV  152 (360)
T ss_dssp             TCEEEEEEEECCSCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHTSTTTCC
T ss_pred             cceeEEEEeecccccHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhCCCCCe
Confidence               3889999999873332   2234567999999999999999999999  7653

>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*

Probab=99.82  E-value=9.2e-21  Score=132.99  Aligned_cols=121  Identities=17%  Similarity=0.128  Sum_probs=102.0

Q ss_pred             cccccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEe------C
Q psy8006           4 IKNIISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFES------S   77 (126)
Q Consensus         4 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~------~   77 (126)
                      +.+|...+.||+|+||.||++.+..++..+|+|.+.... .......+.+|+.++..++| |||+++++++..      .
T Consensus        13 ~grY~i~~~LG~G~fG~Vyla~~~~tg~~VAVKvi~~~~-~~~~~~~~~~Ei~iL~~L~H-pnIV~l~~v~~~~~~~~~~   90 (676)
T 3qa8_A           13 CGPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQEL-SPKNRERWCLEIQIMKKLNH-PNVVSAREVPDGLQKLAPN   90 (676)
T ss_dssp             ----CCCCCCCBCSSSBCCCCCCTTTTCCEEECCCCSCC-CHHHHHHHHHHHHHHHHCCB-TTBCCEEECCTTTCCCCTT
T ss_pred             CCCeEEEEEEeeCCCeEEEEEEECCCCcEEEEEEecccC-CHHHHHHHHHHHHHHHhCCC-CCCCceeeeecccccccCC
Confidence            467888999999999999999999999999999987643 23345568999999999998 999999988754      6


Q ss_pred             CeEEEEEeccCcccHHHHHHhcC---CCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          78 HDMILLLELLTSAVDSKIRESFG---SKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        78 ~~~~lv~e~~~~~~L~~~~~~~~---~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      +..++||||+++++|.+++....   .+++..+..++.|++.|++|||+.++
T Consensus        91 ~~~~LVmEy~~ggsL~~~L~~~~~~~~lse~~i~~I~~QLl~aL~yLHs~gI  142 (676)
T 3qa8_A           91 DLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHENRI  142 (676)
T ss_dssp             SSCCCEEECCSSCBHHHHHHSSSCTTCCCSSHHHHHHHHHHHHHHHHHHTTB
T ss_pred             CeEEEEEEeCCCCCHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHCCC
Confidence            67899999999999999987643   68999999999999999999998764

>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*

Probab=99.82  E-value=4.3e-19  Score=114.04  Aligned_cols=109  Identities=14%  Similarity=0.112  Sum_probs=91.8

Q ss_pred             ccccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCchhHHHHHHHHHHHHH--hcCCCCceeeeeeeEe----CC
Q psy8006           5 KNIISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEA--CRCNSRIVQLHQVFES----SH   78 (126)
Q Consensus         5 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~--~~~~~~iv~l~~~~~~----~~   78 (126)
                      ++|...+.||+|+||.||+|.+  ++..+|+|.+....     ...+.+|.+++..  ++| |||+++++.+..    ..
T Consensus         8 ~~y~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~-----~~~~~~e~~~~~~~~l~h-~niv~~~~~~~~~~~~~~   79 (301)
T 3q4u_A            8 RDITLLECVGKGRYGEVWRGSW--QGENVAVKIFSSRD-----EKSWFRETELYNTVMLRH-ENILGFIASDMTSRHSST   79 (301)
T ss_dssp             GGCEEEEEEEECSSEEEEEEEE--TTEEEEEEEECGGG-----HHHHHHHHHHHHHTCCCC-TTBCCEEEEEEEEETTEE
T ss_pred             CcEEEEEeeccCCCcEEEEEEE--CCEEEEEEEecccc-----chhhHHHHHHHHHhhccC-cCeeeEEEeeccccCCCc
Confidence            5677889999999999999987  58899999986532     3356667777776  677 999999988653    34


Q ss_pred             eEEEEEeccCcccHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhh
Q psy8006          79 DMILLLELLTSAVDSKIRESFGSKSESGVQNCLEPSISVFSSLS  122 (126)
Q Consensus        79 ~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~l~  122 (126)
                      ..++||||+++++|.++++. ..+++..+..++.|++.|++|||
T Consensus        80 ~~~lv~e~~~~g~L~~~l~~-~~~~~~~~~~i~~~i~~~l~~lH  122 (301)
T 3q4u_A           80 QLWLITHYHEMGSLYDYLQL-TTLDTVSCLRIVLSIASGLAHLH  122 (301)
T ss_dssp             EEEEEECCCTTCBHHHHHTT-CCBCHHHHHHHHHHHHHHHHHHH
T ss_pred             eeEEehhhccCCCHHHHHhh-cccCHHHHHHHHHHHHHHHHHHH
Confidence            68999999999999999965 56999999999999999999999

>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*

Probab=99.81  E-value=9.3e-19  Score=123.22  Aligned_cols=119  Identities=14%  Similarity=0.075  Sum_probs=99.0

Q ss_pred             ccccceeeccCccceeEEEEEEccC---CcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeEE
Q psy8006           5 KNIISSIINDMGKYATVRRCRDRKN---GTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMI   81 (126)
Q Consensus         5 ~~~~~~~~lg~g~~~~v~~~~~~~~---~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~~   81 (126)
                      ..|...+.||+|+||.||+|.+..+   +..+|+|.+.... .......+.+|+.++..++| |||+++++.+. .+..+
T Consensus       390 ~~y~i~~~LG~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~E~~~l~~l~H-pnIv~l~~~~~-~~~~~  466 (656)
T 2j0j_A          390 ERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCT-SDSVREKFLQEALTMRQFDH-PHIVKLIGVIT-ENPVW  466 (656)
T ss_dssp             GGEEEEEEEECCSSCCEEEEEECCSSSCCEEEEEEECSSTT-CHHHHHHHHHHHHHHHHCCC-TTBCCEEEEEC-SSSCE
T ss_pred             ccEEEeeEEeeCCCEEEEEEEEecCCCccEEEEEEEecccC-CHHHHHHHHHHHHHHHhCCC-CCCCeEEEEEe-cCceE
Confidence            3456678899999999999998644   4578999886543 23334568999999999998 99999999884 55689


Q ss_pred             EEEeccCcccHHHHHHhc-CCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          82 LLLELLTSAVDSKIRESF-GSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        82 lv~e~~~~~~L~~~~~~~-~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      +||||+++++|.++++.+ ..+++..+..++.|++.|++|||+.++
T Consensus       467 lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~gi  512 (656)
T 2j0j_A          467 IIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLESKRF  512 (656)
T ss_dssp             EEEECCTTCBHHHHHHHTTTTCCHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred             EEEEcCCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCc
Confidence            999999999999998754 468999999999999999999998764

>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*

Probab=99.81  E-value=1.1e-18  Score=113.97  Aligned_cols=109  Identities=13%  Similarity=0.153  Sum_probs=94.5

Q ss_pred             ccccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCchhHHHHHHHHHHHHH--hcCCCCceeeeeeeEeCC----
Q psy8006           5 KNIISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEA--CRCNSRIVQLHQVFESSH----   78 (126)
Q Consensus         5 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~--~~~~~~iv~l~~~~~~~~----   78 (126)
                      ++|...+.||+|+||.||++.+  ++..+|+|.+...     ....+.+|.+++..  ++| |||+++++.+....    
T Consensus        42 ~~y~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~-----~~~~~~~e~~~~~~~~l~h-~ni~~~~~~~~~~~~~~~  113 (342)
T 1b6c_B           42 RTIVLQESIGKGRFGEVWRGKW--RGEEVAVKIFSSR-----EERSWFREAEIYQTVMLRH-ENILGFIAADNKDNGTWT  113 (342)
T ss_dssp             HHCEEEEEEEEETTEEEEEEEE--TTEEEEEEEECGG-----GHHHHHHHHHHHHHSCCCC-TTBCCEEEEEECCCSSCC
T ss_pred             ccEEEEeeecCCCCcEEEEEEE--cCccEEEEEeCch-----hHHHHHHHHHHHHHhhcCC-CcEEEEEeeecccCCccc
Confidence            4577788999999999999987  4889999998643     23457788888887  567 99999999998765    


Q ss_pred             eEEEEEeccCcccHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhh
Q psy8006          79 DMILLLELLTSAVDSKIRESFGSKSESGVQNCLEPSISVFSSLS  122 (126)
Q Consensus        79 ~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~l~  122 (126)
                      ..++||||+++++|.+++.. ..+++..+..++.|++.|++|||
T Consensus       114 ~~~lv~e~~~~g~L~~~l~~-~~~~~~~~~~i~~~i~~~l~~lH  156 (342)
T 1b6c_B          114 QLWLVSDYHEHGSLFDYLNR-YTVTVEGMIKLALSTASGLAHLH  156 (342)
T ss_dssp             CEEEEECCCTTCBHHHHHHH-CCBCHHHHHHHHHHHHHHHHHHH
T ss_pred             eeEEEEeecCCCcHHHHHhc-cCccHHHHHHHHHHHHHHHHHHH
Confidence            78999999999999999976 46999999999999999999999

>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A

Probab=99.81  E-value=8.6e-19  Score=115.66  Aligned_cols=116  Identities=16%  Similarity=0.178  Sum_probs=98.4

Q ss_pred             ccccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhc-----------CCCCceeeeee
Q psy8006           5 KNIISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACR-----------CNSRIVQLHQV   73 (126)
Q Consensus         5 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~-----------~~~~iv~l~~~   73 (126)
                      .+|...+.||+|+||.||+|.+..++..+|+|.+....   .....+.+|+.++..++           | |||+++++.
T Consensus        19 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~e~~~l~~l~~~~~~~~~~~~~-~~i~~~~~~   94 (373)
T 1q8y_A           19 ARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDK---VYTEAAEDEIKLLQRVNDADNTKEDSMGA-NHILKLLDH   94 (373)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCH---HHHHHHHHHHHHHHHHHHTCCSHHHHHHH-TTBCCCCEE
T ss_pred             CeEEEEEeeeecCCeEEEEEEecCCCcEEEEEEecCCc---cchhhhhHHHHHHHHhhcccccchhcccc-chHHHHHHH
Confidence            56888899999999999999999999999999997532   22345888999998887           5 899999999


Q ss_pred             eEeCC----eEEEEEeccCcccHHHHHHh--cCCCCHHHHHHHHHHHHHHHHhhhcc-C
Q psy8006          74 FESSH----DMILLLELLTSAVDSKIRES--FGSKSESGVQNCLEPSISVFSSLSKF-E  125 (126)
Q Consensus        74 ~~~~~----~~~lv~e~~~~~~L~~~~~~--~~~~~~~~~~~~~~qi~~~l~~l~~~-~  125 (126)
                      +...+    ..+++||++ +++|.+++..  ...+++..+..++.|++.|++|||+. +
T Consensus        95 ~~~~~~~~~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~~  152 (373)
T 1q8y_A           95 FNHKGPNGVHVVMVFEVL-GENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHRRCG  152 (373)
T ss_dssp             EEEEETTEEEEEEEECCC-CEEHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred             hhccCCCCceEEEEEecC-CCCHHHHHHHhhccCCcHHHHHHHHHHHHHHHHHHHhcCC
Confidence            87544    789999999 7779888875  34599999999999999999999986 5

>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*

Probab=99.80  E-value=5.7e-19  Score=116.82  Aligned_cols=120  Identities=9%  Similarity=-0.006  Sum_probs=84.4

Q ss_pred             ccccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCc-hhHHHHHHHHHHHHHhc--CCCCceeee-------eee
Q psy8006           5 KNIISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRST-DLKAEILHEVAVLEACR--CNSRIVQLH-------QVF   74 (126)
Q Consensus         5 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~-~~~~~~~~e~~~l~~~~--~~~~iv~l~-------~~~   74 (126)
                      .+|...+.||+|+||.||+|.+..++..+|+|.+....... .....+.+|+.++..++  | ||+++++       +.+
T Consensus        62 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~h-p~iv~~~~~~~~p~d~~  140 (371)
T 3q60_A           62 RKLKLVEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLGES-PEEARDRRRLLLPSDAV  140 (371)
T ss_dssp             EEEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECCSTTHHHHHHHHHHHHHHHHHHHC-----------CBCCCCEEE
T ss_pred             eeeeeeeeccCCCCEEEEEEEECCCCceeEEEEEEecccccccHHHHHHHHHHHHHHhcccC-hhhhhhceeEEeeehhe
Confidence            34778899999999999999999999999999999876533 23345778866565554  6 9988755       343


Q ss_pred             EeC-----------------CeEEEEEeccCcccHHHHHHhc-CCCCHHHH------HHHHHHHHHHHHhhhccCC
Q psy8006          75 ESS-----------------HDMILLLELLTSAVDSKIRESF-GSKSESGV------QNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        75 ~~~-----------------~~~~lv~e~~~~~~L~~~~~~~-~~~~~~~~------~~~~~qi~~~l~~l~~~~~  126 (126)
                      ..+                 ...|+||||++ ++|.+++... ..++....      ..++.|++.|++|||+.++
T Consensus       141 ~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~~vk~~i~~qi~~aL~~LH~~~i  215 (371)
T 3q60_A          141 AVQSQPPFAQLSPGQDDYAVANYLLLMPAAS-VDLELLFSTLDFVYVFRGDEGILALHILTAQLIRLAANLQSKGL  215 (371)
T ss_dssp             EETTSCSSSBCSCC---CCEEEEEEEECCCS-EEHHHHHHHHHHSCCCCHHHHHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred             ecCCCCCeeeccCCcccceeeeEEEEecCCC-CCHHHHHHHhccccchhhhhhhhhHHHHHHHHHHHHHHHHHCCC
Confidence            322                 34899999999 7799988753 33444444      5677999999999998763

>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*

Probab=99.80  E-value=2.2e-18  Score=114.44  Aligned_cols=115  Identities=17%  Similarity=0.174  Sum_probs=97.1

Q ss_pred             ccccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCC-----CceeeeeeeEeCCe
Q psy8006           5 KNIISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNS-----RIVQLHQVFESSHD   79 (126)
Q Consensus         5 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~-----~iv~l~~~~~~~~~   79 (126)
                      ++|...+.||+|+||.||+|.+..++..||+|.+...   ......+.+|+.++..+++++     +++.+.+.+...+.
T Consensus        54 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~---~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~  130 (382)
T 2vx3_A           54 DRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNK---KAFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHFMFRNH  130 (382)
T ss_dssp             TTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSS---HHHHHHHHHHHHHHHHHHHCSSGGGGGBCCEEEEEEETTE
T ss_pred             eeEEEEEEEeecCCEEEEEEEEcCCCcEEEEEEEecc---HHHHHHHHHHHHHHHHHHhcccccceeEEEeeeeeccCCc
Confidence            4577788999999999999999999999999999743   223345778888888886535     48999999999999


Q ss_pred             EEEEEeccCcccHHHHHHhc--CCCCHHHHHHHHHHHHHHHHhhhc
Q psy8006          80 MILLLELLTSAVDSKIRESF--GSKSESGVQNCLEPSISVFSSLSK  123 (126)
Q Consensus        80 ~~lv~e~~~~~~L~~~~~~~--~~~~~~~~~~~~~qi~~~l~~l~~  123 (126)
                      .++|||++++ +|.+++...  ..+++..++.++.|++.|+.|||.
T Consensus       131 ~~lv~e~~~~-~L~~~l~~~~~~~~~~~~~~~i~~qi~~al~~lH~  175 (382)
T 2vx3_A          131 LCLVFEMLSY-NLYDLLRNTNFRGVSLNLTRKFAQQMCTALLFLAT  175 (382)
T ss_dssp             EEEEEECCCC-BHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHTS
T ss_pred             eEEEEecCCC-CHHHHHhhcCcCCCCHHHHHHHHHHHHHHHHHhcc
Confidence            9999999976 688888754  469999999999999999999993

>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7

Probab=99.80  E-value=1.2e-18  Score=113.57  Aligned_cols=111  Identities=16%  Similarity=0.141  Sum_probs=93.3

Q ss_pred             ccccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHh--cCCCCceeeeeeeEeC----C
Q psy8006           5 KNIISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEAC--RCNSRIVQLHQVFESS----H   78 (126)
Q Consensus         5 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~--~~~~~iv~l~~~~~~~----~   78 (126)
                      ++|...+.||+|+||.||+|.+.  +..+|+|.+....     .....+|.+++...  +| |||+++++.+...    .
T Consensus        37 ~~y~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~-----~~~~~~e~~~~~~~~~~h-~~i~~~~~~~~~~~~~~~  108 (337)
T 3mdy_A           37 KQIQMVKQIGKGRYGEVWMGKWR--GEKVAVKVFFTTE-----EASWFRETEIYQTVLMRH-ENILGFIAADIKGTGSWT  108 (337)
T ss_dssp             HHCEEEEEEEEETTEEEEEEEET--TEEEEEEEEEGGG-----HHHHHHHHHHHTSTTCCC-TTBCCEEEEEEESCGGGC
T ss_pred             cceEEEeEeecCCCeEEEEEEEC--CceEEEEEEeccc-----cchhhhHHHHHHHHhhcC-CCeeeEEEEEccCCCCCC
Confidence            45777899999999999999875  7899999986432     22455666666554  66 9999999998876    6


Q ss_pred             eEEEEEeccCcccHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhhcc
Q psy8006          79 DMILLLELLTSAVDSKIRESFGSKSESGVQNCLEPSISVFSSLSKF  124 (126)
Q Consensus        79 ~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~l~~~  124 (126)
                      ..++||||+++++|.++++. ..+++..+..++.|++.|+.|||..
T Consensus       109 ~~~lv~e~~~~g~L~~~l~~-~~~~~~~~~~i~~~i~~~l~~lH~~  153 (337)
T 3mdy_A          109 QLYLITDYHENGSLYDYLKS-TTLDAKSMLKLAYSSVSGLCHLHTE  153 (337)
T ss_dssp             EEEEEECCCTTCBHHHHHHH-CCBCHHHHHHHHHHHHHHHHHHHSC
T ss_pred             ceEEEEeccCCCcHHHHhhc-cCCCHHHHHHHHHHHHHHHHHHHHh
Confidence            89999999999999999976 4699999999999999999999976

>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*

Probab=99.80  E-value=1.6e-18  Score=113.56  Aligned_cols=117  Identities=17%  Similarity=0.158  Sum_probs=96.0

Q ss_pred             ccccceeeccCccceeEEEEEEccCC-cEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCC------ceeeeeeeEeC
Q psy8006           5 KNIISSIINDMGKYATVRRCRDRKNG-TQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSR------IVQLHQVFESS   77 (126)
Q Consensus         5 ~~~~~~~~lg~g~~~~v~~~~~~~~~-~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~------iv~l~~~~~~~   77 (126)
                      .+|...+.||+|+||.||+|.+..++ ..+|+|.+...   ......+.+|+.++..++| ++      ++.+.+.+...
T Consensus        19 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~---~~~~~~~~~E~~~l~~l~~-~~~~~~~~~~~~~~~~~~~   94 (355)
T 2eu9_A           19 ERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNV---GKYREAARLEINVLKKIKE-KDKENKFLCVLMSDWFNFH   94 (355)
T ss_dssp             TTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSC---HHHHHHHHHHHHHHHHHHH-HCTTSCSCBCCEEEEEEET
T ss_pred             ccEEEEEEeeccCCeEEEEEEecCCCceEEEEEEEccc---ccchhHHHHHHHHHHHHhh-cCCCCceeEEEeeeeeeeC
Confidence            45777889999999999999998777 68999999743   2334468889999998876 44      88889999999


Q ss_pred             CeEEEEEeccCcccHHHHHHhc--CCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          78 HDMILLLELLTSAVDSKIRESF--GSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        78 ~~~~lv~e~~~~~~L~~~~~~~--~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      +..++|||+++++ +.+.+...  ..+++..+..++.|++.|++|||+.++
T Consensus        95 ~~~~lv~e~~~~~-l~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~~i  144 (355)
T 2eu9_A           95 GHMCIAFELLGKN-TFEFLKENNFQPYPLPHVRHMAYQLCHALRFLHENQL  144 (355)
T ss_dssp             TEEEEEEECCCCB-HHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHTTTE
T ss_pred             CeEEEEEeccCCC-hHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCc
Confidence            9999999999666 55555433  369999999999999999999998763

>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}

Probab=99.79  E-value=1.7e-18  Score=115.56  Aligned_cols=114  Identities=13%  Similarity=0.133  Sum_probs=91.6

Q ss_pred             ccccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCC------
Q psy8006           5 KNIISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSH------   78 (126)
Q Consensus         5 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~------   78 (126)
                      ..|...+.||+|+||.||.|.+..++. +|+|.+......      ..+|+.+++.++| |||+++++++...+      
T Consensus        40 ~~Y~~~~~lG~G~~g~V~~a~~~~~~~-~aikk~~~~~~~------~~~E~~il~~l~h-~niv~l~~~~~~~~~~~~~~  111 (394)
T 4e7w_A           40 IAYTNCKVIGNGSFGVVFQAKLVESDE-VAIKKVLQDKRF------KNRELQIMRIVKH-PNVVDLKAFFYSNGDKKDEV  111 (394)
T ss_dssp             EEEEEEEEEEEETTEEEEEEEETTTEE-EEEEEEECCTTS------CCHHHHHHHTCCC-TTBCCEEEEEEEESSSSSCE
T ss_pred             ceEEEeEEEeeCCCeEEEEEEECCCCe-EEEEEEecCcch------HHHHHHHHHhCCC-CCcceEEEEEEecCCCCCce
Confidence            457788999999999999999987665 888887654321      2368999999998 99999999986443      


Q ss_pred             eEEEEEeccCcccHHHHH---HhcCCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          79 DMILLLELLTSAVDSKIR---ESFGSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        79 ~~~lv~e~~~~~~L~~~~---~~~~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      ..++||||++++.+..+.   ..+..+++..++.++.|++.|++|||+.++
T Consensus       112 ~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~i  162 (394)
T 4e7w_A          112 FLNLVLEYVPETVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIHSIGI  162 (394)
T ss_dssp             EEEEEEECCSEEHHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred             EEEEEeeccCccHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHCCc
Confidence            388999999988443332   235679999999999999999999998763

>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}

Probab=99.79  E-value=1.7e-18  Score=112.86  Aligned_cols=113  Identities=12%  Similarity=0.097  Sum_probs=90.0

Q ss_pred             ccccccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCchhHHHHHHHHHHH--HHhcCCCCceeeeeeeE-----
Q psy8006           3 NIKNIISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVL--EACRCNSRIVQLHQVFE-----   75 (126)
Q Consensus         3 ~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l--~~~~~~~~iv~l~~~~~-----   75 (126)
                      ++++|...+.||+|+||.||+|..  ++..+|+|++....     ...+..|.++.  ..++| |||+++++.+.     
T Consensus        11 ~~~~y~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~-----~~~~~~e~~~~~~~~~~h-~~i~~~~~~~~~~~~~   82 (336)
T 3g2f_A           11 DLDNLKLLELIGRGRYGAVYKGSL--DERPVAVKVFSFAN-----RQNFINEKNIYRVPLMEH-DNIARFIVGDERVTAD   82 (336)
T ss_dssp             CTTSEEEEEEEEECSSEEEEEEEE--TTEEEEEEEEEGGG-----HHHHHHHHHHHTSTTCCC-TTBCCEEEEEEEECTT
T ss_pred             ChHHhheeeecccCCCeEEEEEEE--CCeEEEEEEeeccc-----hhhHHHHHHHHHHHhccC-cchhhheecccccccC
Confidence            457788899999999999999976  57899999997542     22344444443  34677 99999987543     


Q ss_pred             eCCeEEEEEeccCcccHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhhcc
Q psy8006          76 SSHDMILLLELLTSAVDSKIRESFGSKSESGVQNCLEPSISVFSSLSKF  124 (126)
Q Consensus        76 ~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~l~~~  124 (126)
                      .....++||||+++++|.++++.. ..++..+..++.|++.|++|||+.
T Consensus        83 ~~~~~~lv~e~~~~g~L~~~l~~~-~~~~~~~~~i~~qi~~~L~~LH~~  130 (336)
T 3g2f_A           83 GRMEYLLVMEYYPNGSLXKYLSLH-TSDWVSSCRLAHSVTRGLAYLHTE  130 (336)
T ss_dssp             SCEEEEEEECCCTTCBHHHHHHHC-CBCHHHHHHHHHHHHHHHHHHHCC
T ss_pred             CCceEEEEEecCCCCcHHHHHhhc-ccchhHHHHHHHHHHHHHHHHHhh
Confidence            233678999999999999999764 468899999999999999999986

>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*

Probab=99.78  E-value=1.8e-18  Score=116.68  Aligned_cols=113  Identities=18%  Similarity=0.090  Sum_probs=88.9

Q ss_pred             ccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeEEEEEec
Q psy8006           7 IISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLLEL   86 (126)
Q Consensus         7 ~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~~lv~e~   86 (126)
                      +...+.||+|+||.||.+ ...+|..||+|.+....     ...+.+|+.++..+.+||||+++++.+..+...|+|||+
T Consensus        17 ~~~~~~LG~G~~g~V~~~-~~~~g~~vAvK~~~~~~-----~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~~lv~E~   90 (434)
T 2rio_A           17 VVSEKILGYGSSGTVVFQ-GSFQGRPVAVKRMLIDF-----CDIALMEIKLLTESDDHPNVIRYYCSETTDRFLYIALEL   90 (434)
T ss_dssp             EEEEEEEEECSTTCEEEE-EESSSSEEEEEEEEGGG-----HHHHHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEECC
T ss_pred             eeccCeEeeCCCeEEEEE-EEECCeEEEEEEEcHHH-----HHHHHHHHHHHHhccCCCCcCeEEEEEecCCeEEEEEec
Confidence            445789999999999865 44578999999987542     335788999999874339999999999999999999999


Q ss_pred             cCcccHHHHHHhcCCC-------CHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          87 LTSAVDSKIRESFGSK-------SESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        87 ~~~~~L~~~~~~~~~~-------~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      +++ +|.+++......       ++..+..++.|++.|++|||+.++
T Consensus        91 ~~g-sL~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~i  136 (434)
T 2rio_A           91 CNL-NLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSLKI  136 (434)
T ss_dssp             CSE-EHHHHHHTC------------CCHHHHHHHHHHHHHHHHHTTE
T ss_pred             CCC-CHHHHHhccCCCchhhhhccchhHHHHHHHHHHHHHHHHHCCc
Confidence            975 799998764322       233457799999999999998763

>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}

Probab=99.77  E-value=1.6e-18  Score=116.91  Aligned_cols=114  Identities=13%  Similarity=0.043  Sum_probs=92.6

Q ss_pred             cccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeEEEEEe
Q psy8006           6 NIISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLLE   85 (126)
Q Consensus         6 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~~lv~e   85 (126)
                      +|...+.||+|+||.|+. ....+++.||+|.+......     ...+|+.+++.+..||||+++++.+......|+|||
T Consensus        25 ~y~~~~~LG~G~~G~V~~-~~~~~~~~vAvK~~~~~~~~-----~~~~E~~~l~~l~~HpnIv~l~~~~~~~~~~~lv~E   98 (432)
T 3p23_A           25 SFCPKDVLGHGAEGTIVY-RGMFDNRDVAVKRILPECFS-----FADREVQLLRESDEHPNVIRYFCTEKDRQFQYIAIE   98 (432)
T ss_dssp             EEEEEEEEEECGGGCEEE-EEESSSSEEEEEEECTTTEE-----ECHHHHHHHHHSCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             EEecCCeeecCcCEEEEE-EEEeCCeEEEEEEECHHHHH-----HHHHHHHHHHhccCCCCcCeEEEEEecCCEEEEEEE
Confidence            467788999999999764 34467899999999764332     256799999999433999999999999999999999


Q ss_pred             ccCcccHHHHHHhc-CCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          86 LLTSAVDSKIRESF-GSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        86 ~~~~~~L~~~~~~~-~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      ++++ +|.+++... ..+++..+..++.|++.|++|||+.++
T Consensus        99 ~~~g-~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~i  139 (432)
T 3p23_A           99 LCAA-TLQEYVEQKDFAHLGLEPITLLQQTTSGLAHLHSLNI  139 (432)
T ss_dssp             CCSE-EHHHHHHSSSCCCCSSCHHHHHHHHHHHHHHHHHTTC
T ss_pred             CCCC-CHHHHHHhcCCCccchhHHHHHHHHHHHHHHHHHCcC
Confidence            9986 688888754 346666778999999999999998764

>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*

Probab=99.77  E-value=5.3e-18  Score=117.74  Aligned_cols=111  Identities=17%  Similarity=0.115  Sum_probs=85.5

Q ss_pred             ccCccceeEEEEEEccCCcEEEEEEeecCCCC--------chhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeEEEEE
Q psy8006          13 NDMGKYATVRRCRDRKNGTQYAAKFLRKKRRS--------TDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLL   84 (126)
Q Consensus        13 lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~--------~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~~lv~   84 (126)
                      .+.|..|....+...-.|..+++|.+......        ....+++.+|+++|.++.+|+||+++++++++++..||||
T Consensus       242 ~~~~~~~~h~~~rr~~fg~~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~ed~~~~yLVM  321 (569)
T 4azs_A          242 PYAGAGLAHKRSRRYFFGEDYVCKFFYYDMPHGILTAEESQRNKYELHNEIKFLTQPPAGFDAPAVLAHGENAQSGWLVM  321 (569)
T ss_dssp             -C--------CCEEEEECSSEEEEEEESSCSTTCSCHHHHHHHHHHHHHHHHHHHSCCTTCCCCCEEEEEECSSEEEEEE
T ss_pred             cccCCcccccccccccccceeEEEEEecccccccchhhhhHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEECCEEEEEE
Confidence            44555555555555566888999999865321        1223459999999999976699999999999999999999


Q ss_pred             eccCcccHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          85 ELLTSAVDSKIRESFGSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        85 e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      ||++|++|.+++++++++++.   .++.||+.||+|+|+.++
T Consensus       322 Eyv~G~~L~d~i~~~~~l~~~---~I~~QIl~AL~ylH~~GI  360 (569)
T 4azs_A          322 EKLPGRLLSDMLAAGEEIDRE---KILGSLLRSLAALEKQGF  360 (569)
T ss_dssp             ECCCSEEHHHHHHTTCCCCHH---HHHHHHHHHHHHHHHTTC
T ss_pred             ecCCCCcHHHHHHhCCCCCHH---HHHHHHHHHHHHHHHCCc
Confidence            999999999999988888775   478999999999999875

>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*

Probab=99.71  E-value=3.9e-17  Score=112.82  Aligned_cols=108  Identities=13%  Similarity=0.035  Sum_probs=79.7

Q ss_pred             cceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCch------hHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeEE
Q psy8006           8 ISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTD------LKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMI   81 (126)
Q Consensus         8 ~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~------~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~~   81 (126)
                      .+.+.||+|+||.||++  ...+..+++|..........      ..+.+.+|+.++.+++| |||+++..+....+..|
T Consensus       339 ~~~~~LG~G~fg~Vy~~--~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~h-~nIv~~~~~~~~~~~~~  415 (540)
T 3en9_A          339 IPEHLIGKGAEADIKRD--SYLDFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALVKD-FGIPAPYIFDVDLDNKR  415 (540)
T ss_dssp             ---------CCEEEEEE--ECSSCEEEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHGGG-GTCCCCCEEEEETTTTE
T ss_pred             CCCCEEeeCCCEEEEEE--EECCCeEEEEEEecccccchhhhhHHHHHHHHHHHHHHHhcCC-CCcCceEEEEEeCCccE
Confidence            45678999999999999  34577899998766443221      12347999999999998 99996655555677789


Q ss_pred             EEEeccCcccHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          82 LLLELLTSAVDSKIRESFGSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        82 lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      +||||+++++|.+++..        +..++.|++.+++|||+.++
T Consensus       416 lVmE~~~ggsL~~~l~~--------~~~i~~qi~~aL~~LH~~gI  452 (540)
T 3en9_A          416 IMMSYINGKLAKDVIED--------NLDIAYKIGEIVGKLHKNDV  452 (540)
T ss_dssp             EEEECCCSEEHHHHSTT--------CTHHHHHHHHHHHHHHHTTE
T ss_pred             EEEECCCCCCHHHHHHH--------HHHHHHHHHHHHHHHHHCcC
Confidence            99999999999998875        56899999999999998763

>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*

Probab=99.67  E-value=1.9e-16  Score=101.54  Aligned_cols=105  Identities=13%  Similarity=0.109  Sum_probs=79.2

Q ss_pred             ceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCc----------------hhHHHHHHHHHHHHHhcCCCCceeeee
Q psy8006           9 SSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRST----------------DLKAEILHEVAVLEACRCNSRIVQLHQ   72 (126)
Q Consensus         9 ~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~----------------~~~~~~~~e~~~l~~~~~~~~iv~l~~   72 (126)
                      ..+.||+|+||.||+|.+ .++..+|+|.++......                .....+.+|+.++..++| +++..   
T Consensus        94 ~~~~iG~G~~g~Vy~~~~-~~g~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~~l~~l~~-~~v~~---  168 (282)
T 1zar_A           94 IGKLMGEGKESAVFNCYS-EKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQG-LAVPK---  168 (282)
T ss_dssp             EEEEEEECSSEEEEEEEE-TTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTTT-SSSCC---
T ss_pred             ecCEeccCCCceEEEEEe-CCCCEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHHHHHhccC-CCcCe---
Confidence            458999999999999999 889999999997543211                123458899999999984 54444   


Q ss_pred             eeEeCCeEEEEEeccCcccHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          73 VFESSHDMILLLELLTSAVDSKIRESFGSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        73 ~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      .+. .+..|+||||+++++|.+ +..      .....++.|++.|+.|||+.++
T Consensus       169 ~~~-~~~~~lvmE~~~g~~L~~-l~~------~~~~~i~~qi~~~l~~lH~~gi  214 (282)
T 1zar_A          169 VYA-WEGNAVLMELIDAKELYR-VRV------ENPDEVLDMILEEVAKFYHRGI  214 (282)
T ss_dssp             EEE-EETTEEEEECCCCEEGGG-CCC------SCHHHHHHHHHHHHHHHHHTTE
T ss_pred             EEe-ccceEEEEEecCCCcHHH-cch------hhHHHHHHHHHHHHHHHHHCCC
Confidence            333 355799999999999976 321      2345799999999999998764

>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}

Probab=99.60  E-value=1.5e-15  Score=101.89  Aligned_cols=121  Identities=12%  Similarity=0.086  Sum_probs=84.0

Q ss_pred             ccccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCC-chhHHHHHHHHHHHHHhcCCCCceee---------eee-
Q psy8006           5 KNIISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRS-TDLKAEILHEVAVLEACRCNSRIVQL---------HQV-   73 (126)
Q Consensus         5 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~-~~~~~~~~~e~~~l~~~~~~~~iv~l---------~~~-   73 (126)
                      .++..++.||+|+||.||+|.+..++..||+|++...... ......+.+|+.++..++|.++....         .+. 
T Consensus        78 ~~~~~~~~LG~G~fG~Vy~a~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~~~~~~~~~~~~~~~~~  157 (413)
T 3dzo_A           78 RTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDLV  157 (413)
T ss_dssp             EEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEECCSCC----CCHHHHHHHHGGGGSTTCCSHHHHHHHTCBCCCCEEE
T ss_pred             eeEEEecccccCCCEEEEEEEecCCCCceEEEEEecCCCccHHHHHHHHHHHHHHHhhccCCCHHHHHHhcccccchhhc
Confidence            4567788999999999999999999999999998844322 22234688999988888762221111         111 


Q ss_pred             -----------eEe-----CCeEEEEEeccCcccHHHHHHh-------cCCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          74 -----------FES-----SHDMILLLELLTSAVDSKIRES-------FGSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        74 -----------~~~-----~~~~~lv~e~~~~~~L~~~~~~-------~~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                                 ...     ....+++|+.+. ++|.++++.       ...+++..+..++.|++.|++|||+.++
T Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~L~~ll~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~i  232 (413)
T 3dzo_A          158 KDPQKKKMIRVRLDERDMWVLSRFFLYPRMQ-SNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHYGL  232 (413)
T ss_dssp             ECCC---------------CCSEEEEEECCS-EEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred             ccCCCCccccccCCCccccccceEEEeehhc-CCHHHHHHHhhcccccCCCCCHHHHHHHHHHHHHHHHHHHhCCc
Confidence                       111     123677787655 558877741       2347788888999999999999998763

>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*

Probab=99.51  E-value=7.4e-14  Score=88.41  Aligned_cols=110  Identities=17%  Similarity=0.119  Sum_probs=78.6

Q ss_pred             cceeeccCccceeEEEEEEccCCcE--EEEEEeecCCCCc----------------------hhHHHHHHHHHHHHHhcC
Q psy8006           8 ISSIINDMGKYATVRRCRDRKNGTQ--YAAKFLRKKRRST----------------------DLKAEILHEVAVLEACRC   63 (126)
Q Consensus         8 ~~~~~lg~g~~~~v~~~~~~~~~~~--~aiK~~~~~~~~~----------------------~~~~~~~~e~~~l~~~~~   63 (126)
                      ...+.||+|+||.||+|.+..+|..  +|+|+++......                      .....+.+|+..+..+.+
T Consensus        50 ~i~~~ig~G~~g~Vy~a~~~~~g~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~  129 (258)
T 1zth_A           50 AMGGVISTGKEANVFYADGVFDGKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVFIWTEKEFRNLERAKE  129 (258)
T ss_dssp             EEEEEEEECSSEEEEEEEEEETTEEEEEEEEEECCC-------GGGTTTCTTSCC----CHHHHHHHHHHHHHHHHHHHH
T ss_pred             hhCCEEeecceEEEEEEEEcCCCcEeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHHHHHHHHHHHHHHHHHh
Confidence            3467899999999999998778888  9999876542110                      011357899999999987


Q ss_pred             CCCc--eeeeeeeEeCCeEEEEEeccCc-c----cHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhh-ccC
Q psy8006          64 NSRI--VQLHQVFESSHDMILLLELLTS-A----VDSKIRESFGSKSESGVQNCLEPSISVFSSLS-KFE  125 (126)
Q Consensus        64 ~~~i--v~l~~~~~~~~~~~lv~e~~~~-~----~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~l~-~~~  125 (126)
                       +++  +..+.    ....++||||+++ |    +|.++...   .++..+..++.|++.++.||| +.+
T Consensus       130 -~~i~~p~~~~----~~~~~lVmE~~g~~g~~~~~L~~~~~~---~~~~~~~~i~~qi~~~l~~lH~~~g  191 (258)
T 1zth_A          130 -AGVSVPQPYT----YMKNVLLMEFIGEDELPAPTLVELGRE---LKELDVEGIFNDVVENVKRLYQEAE  191 (258)
T ss_dssp             -TTCCCCCEEE----EETTEEEEECCEETTEECCBHHHHGGG---GGGSCHHHHHHHHHHHHHHHHHTSC
T ss_pred             -CCCCCCeEEE----cCCCEEEEEecCCCCCccccHHHHhhc---cChHHHHHHHHHHHHHHHHHHHHCC
Confidence             653  33332    1356899999953 3    56555432   345677899999999999999 765

>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A

Probab=99.33  E-value=5.8e-13  Score=88.62  Aligned_cols=110  Identities=15%  Similarity=0.122  Sum_probs=72.8

Q ss_pred             ccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCC------------chh--------HHHHHHHHHHHHHhcCCCC
Q psy8006           7 IISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRS------------TDL--------KAEILHEVAVLEACRCNSR   66 (126)
Q Consensus         7 ~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~------------~~~--------~~~~~~e~~~l~~~~~~~~   66 (126)
                      |.....||+|++|.||.|.+. +|+.+|+|+++.....            ...        ..+..+|...+.++.+ ++
T Consensus        97 Y~I~~~IG~Gk~a~VY~a~d~-~G~~vAvKi~r~~~~sfr~v~~~r~~~~~~~~~~~~~~~rl~A~kE~~nL~rL~~-~g  174 (397)
T 4gyi_A           97 YSVGSRIGVGKESDIMIVADE-KGKQKVLKIHRLGRISFRTVKANRDYLRNRSTGSWMYLSRLAAIKEFAFMKALYE-EG  174 (397)
T ss_dssp             SEEEEEEEECSSEEEEEEECT-TCCEEEEEEECTTEECCCCCC--CEECTTSCHHHHHHHHHHHHHHHHHHHHHHHH-TT
T ss_pred             EEecCEeeeCCceEEEEEECC-CCCEEEEEEEecccccHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHHh-cC
Confidence            455789999999999999885 6899999988653211            000        1123456777777754 44


Q ss_pred             ceeeeeeeEeCCeEEEEEeccCcccHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          67 IVQLHQVFESSHDMILLLELLTSAVDSKIRESFGSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        67 iv~l~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      +.. ...+.. ...+|||||+++.+|.++..      ...+..++.|++.++.+||+.++
T Consensus       175 v~v-p~p~~~-~~~~LVME~i~G~~L~~l~~------~~~~~~l~~qll~~l~~lH~~gI  226 (397)
T 4gyi_A          175 FPV-PEPIAQ-SRHTIVMSLVDALPMRQVSS------VPDPASLYADLIALILRLAKHGL  226 (397)
T ss_dssp             CSC-CCEEEE-ETTEEEEECCSCEEGGGCCC------CSCHHHHHHHHHHHHHHHHHTTE
T ss_pred             CCC-Ceeeec-cCceEEEEecCCccHhhhcc------cHHHHHHHHHHHHHHHHHHHCCC
Confidence            322 111211 22479999999988754322      23356788999999999998763

>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*

Probab=98.95  E-value=2.5e-08  Score=62.83  Aligned_cols=111  Identities=10%  Similarity=-0.002  Sum_probs=82.0

Q ss_pred             ccccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeEEEEE
Q psy8006           5 KNIISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLL   84 (126)
Q Consensus         5 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~~lv~   84 (126)
                      ..|.....++.|+.+.||+....  +..+++|.........  ...+.+|..++..+..+..++++++.....+..|+||
T Consensus        14 ~~~~~~~~~~g~s~~~v~~~~~~--~~~~vlK~~~~~~~~~--~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~lv~   89 (263)
T 3tm0_A           14 EKYRCVKDTEGMSPAKVYKLVGE--NENLYLKMTDSRYKGT--TYDVEREKDMMLWLEGKLPVPKVLHFERHDGWSNLLM   89 (263)
T ss_dssp             TTSEEEECCSCCSSSEEEEEECS--SCEEEEEEECGGGTTS--TTCHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEE
T ss_pred             ccceeEeeccCCCCCeEEEEECC--CCcEEEEeCCcccCCC--HHHHHHHHHHHHHHhcCCCCCeEEEEEecCCceEEEE
Confidence            34545566777888889988643  5789999987642211  1247889999999864467888888888888999999


Q ss_pred             eccCcccHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhhcc
Q psy8006          85 ELLTSAVDSKIRESFGSKSESGVQNCLEPSISVFSSLSKF  124 (126)
Q Consensus        85 e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~l~~~  124 (126)
                      |+++|.++.+...     +......++.++..+++.||..
T Consensus        90 e~i~G~~l~~~~~-----~~~~~~~~~~~l~~~l~~LH~~  124 (263)
T 3tm0_A           90 SEADGVLCSEEYE-----DEQSPEKIIELYAECIRLFHSI  124 (263)
T ss_dssp             ECCSSEEHHHHCC-----TTTCHHHHHHHHHHHHHHHHHS
T ss_pred             EecCCeehhhccC-----CcccHHHHHHHHHHHHHHHhCC
Confidence            9999999876532     1223346788999999999973

>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6

Probab=98.45  E-value=3.4e-06  Score=52.70  Aligned_cols=97  Identities=13%  Similarity=-0.033  Sum_probs=68.9

Q ss_pred             cCccceeEEEEEEccCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCC-CceeeeeeeEeCCeEEEEEeccCcccH
Q psy8006          14 DMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNS-RIVQLHQVFESSHDMILLLELLTSAVD   92 (126)
Q Consensus        14 g~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~-~iv~l~~~~~~~~~~~lv~e~~~~~~L   92 (126)
                      +.|..+.||+... .+|..+++|.......     ..+.+|+.++..+.+++ .+++++.....++..+++||+++|.++
T Consensus        29 ~gg~~~~v~~~~~-~~g~~~vlK~~~~~~~-----~~~~~E~~~l~~l~~~~~~vP~~~~~~~~~~~~~~v~e~i~G~~l  102 (264)
T 1nd4_A           29 IGCSDAAVFRLSA-QGRPVLFVKTDLSGAL-----NELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLLLGEVPGQDL  102 (264)
T ss_dssp             CTTSSCEEEEEEC-TTSCCEEEEEECSCTT-----SCHHHHHHHHHHHHTTTCCBCCEEEEEECSSCEEEEEECCSSEET
T ss_pred             cCCCCceEEEEec-CCCCeEEEEeCCcccc-----hhhhHHHHHHHHHHhCCCCCCeEEEeccCCCCCEEEEEecCCccc
Confidence            3556688998854 4567799998765411     24778899998887632 255677777777789999999999987


Q ss_pred             HHHHHhcCCCCHHHHHHHHHHHHHHHHhhhcc
Q psy8006          93 SKIRESFGSKSESGVQNCLEPSISVFSSLSKF  124 (126)
Q Consensus        93 ~~~~~~~~~~~~~~~~~~~~qi~~~l~~l~~~  124 (126)
                      .  ..   ..+.   ..++.++..++..||..
T Consensus       103 ~--~~---~~~~---~~~~~~l~~~l~~lh~~  126 (264)
T 1nd4_A          103 L--SS---HLAP---AEKVSIMADAMRRLHTL  126 (264)
T ss_dssp             T--TS---CCCH---HHHHHHHHHHHHHHTTS
T ss_pred             C--cC---cCCH---hHHHHHHHHHHHHHhCC
Confidence            4  21   1222   35778888999999975

>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}

Probab=98.32  E-value=6.1e-06  Score=54.27  Aligned_cols=113  Identities=12%  Similarity=0.105  Sum_probs=77.8

Q ss_pred             ccceeeccCccceeEEEEEEccCCcEEEEEEee--cCCCCchhHHHHHHHHHHHHHhcC-CCCceeeeeeeEeC---CeE
Q psy8006           7 IISSIINDMGKYATVRRCRDRKNGTQYAAKFLR--KKRRSTDLKAEILHEVAVLEACRC-NSRIVQLHQVFESS---HDM   80 (126)
Q Consensus         7 ~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~--~~~~~~~~~~~~~~e~~~l~~~~~-~~~iv~l~~~~~~~---~~~   80 (126)
                      ....+.++.|.++.+|.....  +..+++|...  ..... .....+.+|..++..+.. ...+++++..+...   +..
T Consensus        40 ~~~~~~l~~G~sn~~y~v~~~--~~~~vlr~~~~p~~~~~-~~~~~~~~E~~~l~~L~~~~vpvP~~~~~~~~~~~~g~~  116 (359)
T 3dxp_A           40 PLSVEQFKGGQSNPTFKLVTP--GQTYVMRAKPGPKSKLL-PSAHAIEREYRVMDALAGTDVPVAKMYALCEDESVIGRA  116 (359)
T ss_dssp             CCEEEECCC-CCSCEEEEECS--SCEEEEECCCC-----------CHHHHHHHHHHHTTSSSCCCCEEEEECCTTTTSSC
T ss_pred             CceEEEcCCcccceEEEEEEC--CceEEEEeCCCCCCCCC-CcHHHHHHHHHHHHHhhcCCCCCCcEEEECCCCCccCCe
Confidence            445677899999999988754  3568888775  33211 112247889999999874 14567777776655   458


Q ss_pred             EEEEeccCcccHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhhcc
Q psy8006          81 ILLLELLTSAVDSKIRESFGSKSESGVQNCLEPSISVFSSLSKF  124 (126)
Q Consensus        81 ~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~l~~~  124 (126)
                      |+|||++++..+.+..  -..+++.+...++.++..+++.||..
T Consensus       117 ~~vme~v~G~~l~~~~--~~~l~~~~~~~~~~~l~~~La~LH~~  158 (359)
T 3dxp_A          117 FYIMEFVSGRVLWDQS--LPGMSPAERTAIYDEMNRVIAAMHTV  158 (359)
T ss_dssp             EEEEECCCCBCCCCTT--CTTCCHHHHHHHHHHHHHHHHHHHHS
T ss_pred             EEEEEecCCeecCCCc--cccCCHHHHHHHHHHHHHHHHHHhCC
Confidence            9999999998763311  12467888889999999999999975

>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*

Probab=98.24  E-value=0.0001  Score=46.46  Aligned_cols=102  Identities=13%  Similarity=0.182  Sum_probs=73.6

Q ss_pred             cCccce-eEEEEEEccCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeEEEEEeccCcccH
Q psy8006          14 DMGKYA-TVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLLELLTSAVD   92 (126)
Q Consensus        14 g~g~~~-~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~~lv~e~~~~~~L   92 (126)
                      ..|..+ .||+......+..+.+|.-...     ....+.+|...+..+...-.+.+++.....++..|+|||++++.++
T Consensus        33 ~~G~S~~~v~rl~~~~~~~~~~lk~~~~~-----~~~~~~~E~~~l~~l~~~vPVP~v~~~~~~~~~~~lvme~l~G~~~  107 (272)
T 4gkh_A           33 NVGQSGATIYRLYGKPNAPELFLKHGKGS-----VANDVTDEMVRLNWLTAFMPLPTIKHFIRTPDDAWLLTTAIPGKTA  107 (272)
T ss_dssp             ECSSSSCEEEEEECCTTCCCEEEEEEETH-----HHHHHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECCCSEEH
T ss_pred             cCCCcCCeEEEEEecCCCeEEEEEECCCC-----CHhHHHHHHHHHHHhccCCCcCeEEEEEEECCeEEEEEEeeCCccc
Confidence            334444 5887776666777899976543     2335788999998886534466777777888899999999999988


Q ss_pred             HHHHHhcCCCCHHHHHHHHHHHHHHHHhhhcc
Q psy8006          93 SKIRESFGSKSESGVQNCLEPSISVFSSLSKF  124 (126)
Q Consensus        93 ~~~~~~~~~~~~~~~~~~~~qi~~~l~~l~~~  124 (126)
                      .+....    .......+..++...+..||..
T Consensus       108 ~~~~~~----~~~~~~~~~~~l~~~L~~Lh~~  135 (272)
T 4gkh_A          108 FQVLEE----YPDSGENIVDALAVFLRRLHSI  135 (272)
T ss_dssp             HHHHHH----CGGGHHHHHHHHHHHHHHHHTS
T ss_pred             cccccC----CHHHHHHHHHHHHHHHHHhcCC
Confidence            776554    2233456778889999999875

>3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A*

Probab=97.91  E-value=0.00065  Score=43.82  Aligned_cols=106  Identities=11%  Similarity=0.015  Sum_probs=74.1

Q ss_pred             ceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCC-C-CceeeeeeeE-eCCeEEEEEe
Q psy8006           9 SSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCN-S-RIVQLHQVFE-SSHDMILLLE   85 (126)
Q Consensus         9 ~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~-~-~iv~l~~~~~-~~~~~~lv~e   85 (126)
                      ..+.++.|....+|..     +..+++|....    ......+.+|..++..+.++ + .++....... ..+..+++|+
T Consensus        23 ~v~~l~~G~~n~v~~v-----g~~~VlR~~~~----~~~~~~~~~E~~~L~~L~~~~~v~VP~~~~~~~~~~g~~~~v~e   93 (306)
T 3tdw_A           23 SVESLGEGFRNYAILV-----NGDWVFRFPKS----QQGADELNKEIQLLPLLVGCVKVNIPQYVYIGKRSDGNPFVGYR   93 (306)
T ss_dssp             CEEEEEECSSEEEEEE-----TTTEEEEEESS----HHHHHHHHHHHHHHHHHTTTCSSBCCCEEEEEECTTSCEEEEEE
T ss_pred             eeeecCCCcceeEEEE-----CCEEEEEecCC----chHHHHHHHHHHHHHHHHhcCCCCCCCeEeecccCCCceEEEEe
Confidence            3456777887788876     45678887432    22234688999999999763 1 2344444442 3456789999


Q ss_pred             ccCcccHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhhccC
Q psy8006          86 LLTSAVDSKIRESFGSKSESGVQNCLEPSISVFSSLSKFE  125 (126)
Q Consensus        86 ~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~l~~~~  125 (126)
                      +++|.++....-  ..++..+...+..|+...++.||...
T Consensus        94 ~i~G~~l~~~~~--~~l~~~~~~~~~~~lg~~La~LH~~~  131 (306)
T 3tdw_A           94 KVQGQILGEDGM--AVLPDDAKDRLALQLAEFMNELSAFP  131 (306)
T ss_dssp             CCCSEECHHHHH--TTSCHHHHHHHHHHHHHHHHHHHHSC
T ss_pred             ccCCeECchhhh--hhCCHHHHHHHHHHHHHHHHHHhcCC
Confidence            999998865322  24677888889999999999999753

>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A

Probab=97.66  E-value=0.00041  Score=44.55  Aligned_cols=105  Identities=10%  Similarity=0.066  Sum_probs=71.7

Q ss_pred             eeeccCccceeEEEEEEccCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCC--ceeeeeeeEeCC---eEEEEE
Q psy8006          10 SIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSR--IVQLHQVFESSH---DMILLL   84 (126)
Q Consensus        10 ~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~--iv~l~~~~~~~~---~~~lv~   84 (126)
                      .+.++.|....+|...     ..+++|.....    .....+.+|..++..+..+..  ++.+.......+   ..|+||
T Consensus        25 i~~~~~G~~n~v~~v~-----~~~vlR~~~~~----~~~~~~~~E~~~l~~l~~~~~v~vP~~~~~~~~~~~~~~~~~vm   95 (304)
T 3sg8_A           25 IEISGEGNDCIAYEIN-----RDFIFKFPKHS----RGSTNLFNEVNILKRIHNKLPLPIPEVVFTGMPSETYQMSFAGF   95 (304)
T ss_dssp             CCEEEECSSEEEEEST-----TSEEEEEESSH----HHHHHHHHHHHHHHHHTTSSSSCCCCEEEECCCCSSCSCSCEEE
T ss_pred             eEecCCCCcceEEEEC-----CEEEEEecCCc----chHHHHHHHHHHHHHHHhcCCCCCCceEeecCCCCCCCcceEEE
Confidence            4457888888888753     45788875432    223468899999988844222  233333322222   458899


Q ss_pred             eccCcccHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhhccC
Q psy8006          85 ELLTSAVDSKIRESFGSKSESGVQNCLEPSISVFSSLSKFE  125 (126)
Q Consensus        85 e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~l~~~~  125 (126)
                      ++++|.++.....  ..++..+...++.|+...++.||...
T Consensus        96 ~~i~G~~l~~~~~--~~l~~~~~~~~~~~l~~~la~LH~~~  134 (304)
T 3sg8_A           96 TKIKGVPLTPLLL--NNLPKQSQNQAAKDLARFLSELHSIN  134 (304)
T ss_dssp             ECCCCEECCHHHH--HTSCHHHHHHHHHHHHHHHHHHHHSC
T ss_pred             cccCCeECCcccc--ccCCHHHHHHHHHHHHHHHHHHHcCC
Confidence            9999998854332  24788888999999999999999753

>3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT}

Probab=97.62  E-value=0.001  Score=43.26  Aligned_cols=96  Identities=13%  Similarity=0.064  Sum_probs=68.3

Q ss_pred             cceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCC--CCceeeeeeeEeCCeEEEEEe
Q psy8006           8 ISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCN--SRIVQLHQVFESSHDMILLLE   85 (126)
Q Consensus         8 ~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~--~~iv~l~~~~~~~~~~~lv~e   85 (126)
                      ...+.++.|....+|+...  .+..+++|.....     ....+.+|...+..+...  ..+++++......+..+++||
T Consensus        39 ~~~~~l~gG~~n~~y~v~~--~~~~~vlK~~~~~-----~~~~~~~E~~~L~~L~~~~~v~VP~vl~~~~~~g~~~lvme  111 (312)
T 3jr1_A           39 KHKEKLYSGEMNEIWLIND--EVQTVFVKINERS-----YRSMFRAEADQLALLAKTNSINVPLVYGIGNSQGHSFLLLE  111 (312)
T ss_dssp             CEEEEECCSSSSEEEEEES--SSCEEEEEEEEGG-----GHHHHHHHHHHHHHHHHTTSSBCCCEEEEEECSSEEEEEEE
T ss_pred             eeeEEeCCccceeeeEEEE--CCCeEEEEeCCcc-----cHHHHHHHHHHHHHHHhhCCCCcceEEEEeecCCceEEEEE
Confidence            4456788899999998865  3567888987643     133578888888887531  456677776666778999999


Q ss_pred             ccCcccHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhhcc
Q psy8006          86 LLTSAVDSKIRESFGSKSESGVQNCLEPSISVFSSLSKF  124 (126)
Q Consensus        86 ~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~l~~~  124 (126)
                      ++++..+.          .    ....++..+++.||..
T Consensus       112 ~l~G~~~~----------~----~~~~~lG~~LA~LH~~  136 (312)
T 3jr1_A          112 ALNKSKNK----------Q----SSFTIFAEKIAQLHQI  136 (312)
T ss_dssp             CCCCCCCC----------T----THHHHHHHHHHHHHHC
T ss_pred             eccCCCCC----------c----hhHHHHHHHHHHHHcC
Confidence            99998531          1    2345677788888864

>2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A*

Probab=97.12  E-value=0.0073  Score=40.18  Aligned_cols=82  Identities=10%  Similarity=-0.018  Sum_probs=49.9

Q ss_pred             cceeeccCccceeEEEEEEccCCcEEEEEEeecCCC--Cc---hhHHHHHHHHHHHHHhcCC-C-CceeeeeeeEeCCeE
Q psy8006           8 ISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRR--ST---DLKAEILHEVAVLEACRCN-S-RIVQLHQVFESSHDM   80 (126)
Q Consensus         8 ~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~--~~---~~~~~~~~e~~~l~~~~~~-~-~iv~l~~~~~~~~~~   80 (126)
                      ...+.+|.|..+.||++.....+..+++|...+...  ..   .......+|.+++..+... | .+++++..  +.+..
T Consensus        33 ~~~~~lg~G~~n~vyrv~~~~~~~~~vvK~~~~~~r~~~~~~~~~~~r~~~E~~~L~~l~~~~~~~vP~~~~~--d~~~~  110 (397)
T 2olc_A           33 LTCQEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYS--DTEMA  110 (397)
T ss_dssp             CEEEECCSSSSEEEEEEEC----CEEEEEEECCC-------CCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEE--ETTTT
T ss_pred             eEEEECCCCceEEEEEEEECCCCcEEEEEecchhhcccCCCCcCcHHHHHHHHHHHHHhhhhCCCCcCeEEEE--cCCcc
Confidence            345688999999999997655567899998764321  00   1122467788888877531 2 23344432  34456


Q ss_pred             EEEEeccCccc
Q psy8006          81 ILLLELLTSAV   91 (126)
Q Consensus        81 ~lv~e~~~~~~   91 (126)
                      ++|||++++..
T Consensus       111 ~lvmE~l~g~~  121 (397)
T 2olc_A          111 VTVMEDLSHLK  121 (397)
T ss_dssp             EEEECCCTTSE
T ss_pred             EEEEEeCCCcc
Confidence            89999998743

>3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A*

Probab=97.00  E-value=0.0039  Score=40.81  Aligned_cols=113  Identities=7%  Similarity=0.071  Sum_probs=71.9

Q ss_pred             eeec-cCccceeEEEEEEc--c----CCcEEEEEEeecCC---CCchhHHHHHHHHHHHHHhcCC--CCceeeeeeeEeC
Q psy8006          10 SIIN-DMGKYATVRRCRDR--K----NGTQYAAKFLRKKR---RSTDLKAEILHEVAVLEACRCN--SRIVQLHQVFESS   77 (126)
Q Consensus        10 ~~~l-g~g~~~~v~~~~~~--~----~~~~~aiK~~~~~~---~~~~~~~~~~~e~~~l~~~~~~--~~iv~l~~~~~~~   77 (126)
                      .+.+ +.|....+|.....  .    .+..+++|......   ...  ...+.+|..++..+..+  -.+.+++......
T Consensus        25 ~~~l~~~G~~n~~y~v~~~~~~~~~~~~~~~vlR~~~~~~~~~~~~--~~~~~~E~~~l~~L~~~~~vpvP~v~~~~~~~  102 (357)
T 3ats_A           25 ESGVDSTGMSSETIILTARWQQDGRSIQQKLVARVAPAAEDVPVFP--TYRLDHQFEVIRLVGELTDVPVPRVRWIETTG  102 (357)
T ss_dssp             EEEECTTSSEEEEEEEEEEEEETTEEEEEEEEEEECCCGGGCCSSS--CCCHHHHHHHHHHHHHHCCSCCCCEEEEECSS
T ss_pred             EEECCCCCccceEEEEEEecccCCCCCCceEEEEeCCCCCccccCc--hhHHHHHHHHHHHHhhcCCCCCCcEEEEccCC
Confidence            4566 78888889977543  0    14568888765432   100  11467788888777542  3455666655443


Q ss_pred             ---CeEEEEEeccCcccHHHHHHhc------CCCCHHHHHHHHHHHHHHHHhhhcc
Q psy8006          78 ---HDMILLLELLTSAVDSKIRESF------GSKSESGVQNCLEPSISVFSSLSKF  124 (126)
Q Consensus        78 ---~~~~lv~e~~~~~~L~~~~~~~------~~~~~~~~~~~~~qi~~~l~~l~~~  124 (126)
                         +..|++||+++|.++.+.+...      ..++..+...+..++...+..||..
T Consensus       103 ~~~g~~~~v~e~l~G~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~La~LH~~  158 (357)
T 3ats_A          103 DVLGTPFFLMDYVEGVVPPDVMPYTFGDNWFADAPAERQRQLQDATVAALATLHSI  158 (357)
T ss_dssp             TTTSSCEEEEECCCCBCCCBTTBGGGSCSTTTTSCHHHHHHHHHHHHHHHHHHTTC
T ss_pred             CccCCceEEEEecCCCChhhcCcccccccccCCCCHHHHHHHHHHHHHHHHHHhCC
Confidence               3578999999998764322100      1256666677889999999999975

>3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX}

Probab=95.63  E-value=0.14  Score=32.41  Aligned_cols=78  Identities=15%  Similarity=0.064  Sum_probs=50.4

Q ss_pred             ccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCC--CCceeeeeeeEeCCeEEEEE
Q psy8006           7 IISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCN--SRIVQLHQVFESSHDMILLL   84 (126)
Q Consensus         7 ~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~--~~iv~l~~~~~~~~~~~lv~   84 (126)
                      +...+.+|.|..+.||+... .+|+.+.+|.-.......  ...+.+|...|+.+...  -.+++++..    +..+++|
T Consensus        17 v~~v~~~g~G~~~~vyrv~l-~DG~~~~vK~~~~~~~~~--~~~~~~Ea~~L~~L~~~~~vpvP~v~~~----~~~~lv~   89 (288)
T 3f7w_A           17 VAAVAERGHSHRWHLYRVEL-ADGTPLFVKALPDDAPAL--DGLFRAEALGLDWLGRSFGSPVPQVAGW----DDRTLAM   89 (288)
T ss_dssp             EEEEEEEEEETTEEEEEEEE-TTSCEEEEEECCTTCCCC--TTHHHHHHHHHHHHTCSTTCCSCCEEEE----ETTEEEE
T ss_pred             eEEEEecCCCCCeEEEEEEE-CCCCEEEEEEeCCCCcch--hhHHHHHHHHHHHHHhhCCCCcceEEec----cCceEEE
Confidence            34456788899999999875 468889999766543221  12477899988888541  122333322    2246889


Q ss_pred             eccCccc
Q psy8006          85 ELLTSAV   91 (126)
Q Consensus        85 e~~~~~~   91 (126)
                      |+.+.+.
T Consensus        90 e~l~~~~   96 (288)
T 3f7w_A           90 EWVDERP   96 (288)
T ss_dssp             ECCCCCC
T ss_pred             EeecccC
Confidence            9987653

>3feg_A Choline/ethanolamine kinase; non-protein kinase, choline kinase, structural genomics CONS SGC, hemicholinium-3, phosphorylation; HET: HC7 ADP AMP; 1.30A {Homo sapiens} PDB: 3lq3_A* 2ig7_A*

Probab=94.85  E-value=0.21  Score=33.31  Aligned_cols=102  Identities=13%  Similarity=0.002  Sum_probs=57.3

Q ss_pred             ceeeccCccceeEEEEEEcc-------CCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeEE
Q psy8006           9 SSIINDMGKYATVRRCRDRK-------NGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMI   81 (126)
Q Consensus         9 ~~~~lg~g~~~~v~~~~~~~-------~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~~   81 (126)
                      ..+.+..|....+|++....       .+..+.+|......   .......+|..++..+....-.++++..+.  +  .
T Consensus        54 ~v~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlR~~g~~~---~~~~~~~rE~~vl~~L~~~gv~P~ll~~~~--~--g  126 (379)
T 3feg_A           54 RVYPVSGGLSNLLFRCSLPDHLPSVGEEPREVLLRLYGAIL---QGVDSLVLESVMFAILAERSLGPQLYGVFP--E--G  126 (379)
T ss_dssp             CCEEC-----CCEEEEECCTTSCCCSSCCSEEEEEECC------CCHHHHHHHHHHHHHHHHTTSSCCEEEEET--T--E
T ss_pred             EEEEcCCcccccEEEEEeCCCccccCCCCCeEEEEECCCcc---chHHHHHHHHHHHHHHHhcCCCCeEEEEcC--C--c
Confidence            34556667777788877532       34678888753211   112345689988888765222345555443  2  2


Q ss_pred             EEEeccCcccHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhhccC
Q psy8006          82 LLLELLTSAVDSKIRESFGSKSESGVQNCLEPSISVFSSLSKFE  125 (126)
Q Consensus        82 lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~l~~~~  125 (126)
                      +|+||+++.++..     ..+...   .+..+++..|+-||..+
T Consensus       127 ~v~e~i~G~~l~~-----~~l~~p---~~~~~ia~~La~LH~~~  162 (379)
T 3feg_A          127 RLEQYIPSRPLKT-----QELREP---VLSAAIATKMAQFHGME  162 (379)
T ss_dssp             EEEECCSEEECCG-----GGGGCH---HHHHHHHHHHHHHHTCC
T ss_pred             cEEEEecCccCCh-----hHhCCH---HHHHHHHHHHHHHhCCC
Confidence            8999999976631     111111   34567888888888764

>2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana}

Probab=94.31  E-value=0.74  Score=30.88  Aligned_cols=85  Identities=8%  Similarity=-0.092  Sum_probs=45.7

Q ss_pred             cceeeccCccceeEEEEEEccCCcEEEEEEeecCCC--Cch-----hHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeE
Q psy8006           8 ISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRR--STD-----LKAEILHEVAVLEACRCNSRIVQLHQVFESSHDM   80 (126)
Q Consensus         8 ~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~--~~~-----~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~   80 (126)
                      ...+.+|.|..+.+|+...  .+..+++|...+...  ...     ....+..|+..+..-.....+++++...  ++..
T Consensus        37 ~~i~~l~~G~~n~vyrv~~--~~~~~vvK~~~p~~~~~~~~~~~~~~~~~~E~e~l~~~~~~~~~~vP~v~~~~--~~~~  112 (420)
T 2pyw_A           37 LVIKEVGDGNLNFVFIVVG--SSGSLVIKQALPYIRCIGESWPMTKERAYFEATTLRKHGNLSPDHVPEVYHFD--RTMA  112 (420)
T ss_dssp             CEEEECCCSSSCEEEEEEC--SSCEEEEEECCSBCTTTCTTSBCCTTHHHHHHHHHHHHHHHSGGGSCCEEEEE--TTTT
T ss_pred             eEEEEccCCCcEEEEEEEc--CCceEEEEECchhhcccCcccccchhHHHHHHHHHHHHHhhCCCCCCeEEEEC--CCcc
Confidence            4566789999999998854  456789994332110  110     1222333332222111113444555443  4667


Q ss_pred             EEEEecc-Cc-ccHHHHH
Q psy8006          81 ILLLELL-TS-AVDSKIR   96 (126)
Q Consensus        81 ~lv~e~~-~~-~~L~~~~   96 (126)
                      ++|||++ ++ ..+...+
T Consensus       113 ~lv~e~l~~g~~~l~~~l  130 (420)
T 2pyw_A          113 LIGMRYLEPPHIILRKGL  130 (420)
T ss_dssp             EEEECCCCTTCEEHHHHH
T ss_pred             EEEEeecCCcchhHHHHH
Confidence            8999999 77 3444433

>3cxl_A N-chimerin; SH2, RHO-GAP, structural genomics consortium, SGC, gtpas activation, metal-binding, phorbol-ester binding, SH2 domai finger; 2.60A {Homo sapiens} PDB: 1xa6_A

Probab=94.15  E-value=0.0035  Score=42.89  Aligned_cols=56  Identities=13%  Similarity=0.117  Sum_probs=12.7

Q ss_pred             ceeEEEEEEccCCcEEEE------EEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeee
Q psy8006          18 YATVRRCRDRKNGTQYAA------KFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVF   74 (126)
Q Consensus        18 ~~~v~~~~~~~~~~~~ai------K~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~   74 (126)
                      ||.||++.......+||+      |.......+......+.++..++...+| ||+++.++..
T Consensus       152 fG~v~~g~~~~~~~~Vav~~~~~~K~~~~~~~~~e~~~~~~rea~l~~~~~H-~niv~~h~f~  213 (463)
T 3cxl_A          152 YTTLNREPAYKKHMPVLKETHDERDSTGQDGVSEKRLTSLVRRATLKENEQI-PKYEKIHNFK  213 (463)
T ss_dssp             BCCC---------CCBGGGC------------------------------------CBCCCEE
T ss_pred             chhhhcccccccCCchhhhhccCccccccccccccccccccccccccccccc-cccCCCcceE
Confidence            999999987655567888      6665544443334457888888888888 9999887654

>1nw1_A Choline kinase (49.2 KD); phospholipid synthesis, protein kinase fold, transferase; 2.02A {Caenorhabditis elegans} SCOP: d.144.1.8

Probab=93.61  E-value=1.1  Score=30.36  Aligned_cols=101  Identities=13%  Similarity=0.022  Sum_probs=61.5

Q ss_pred             ceeeccCccceeEEEEEEcc-------CCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeEE
Q psy8006           9 SSIINDMGKYATVRRCRDRK-------NGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMI   81 (126)
Q Consensus         9 ~~~~lg~g~~~~v~~~~~~~-------~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~~   81 (126)
                      ..+.++.|....+|++....       .+..+.+|+.....  .  ...+.+|..++..+..+.-.+++++.+.  +  .
T Consensus        77 ~v~~l~gG~tN~~y~v~~~~~~~~~~~~~~~~vlRi~~~~~--~--~~~li~E~~~l~~L~~~g~~P~l~~~~~--~--g  148 (429)
T 1nw1_A           77 RISRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFNPE--T--ESHLVAESVIFTLLSERHLGPKLYGIFS--G--G  148 (429)
T ss_dssp             EEEEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECSCC--C--HHHHHHHHHHHHHHHHTTSSSCEEEEET--T--E
T ss_pred             EEEEeCCCcccceEEEEeCCCccccCCCCceEEEEEeCCCC--c--HHHHHHHHHHHHHHHhCCCCCcEEEEeC--C--C
Confidence            44567778888899887642       24678888774321  1  1245578888888765222345555442  2  2


Q ss_pred             EEEeccCcccHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhhccC
Q psy8006          82 LLLELLTSAVDSKIRESFGSKSESGVQNCLEPSISVFSSLSKFE  125 (126)
Q Consensus        82 lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~l~~~~  125 (126)
                      +++||+++.++..-     .+..   .....+++..++.||...
T Consensus       149 ~v~e~l~G~~l~~~-----~l~~---~~~~~~ia~~La~LH~~~  184 (429)
T 1nw1_A          149 RLEEYIPSRPLSCH-----EISL---AHMSTKIAKRVAKVHQLE  184 (429)
T ss_dssp             EEECCCCEEECCTT-----GGGS---HHHHHHHHHHHHHHTTCC
T ss_pred             EEEEEeCCcccChh-----hcCC---HHHHHHHHHHHHHHhCCc
Confidence            78999987665210     1111   134677888888888753

>2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis}

Probab=93.56  E-value=0.88  Score=29.17  Aligned_cols=95  Identities=6%  Similarity=0.012  Sum_probs=49.8

Q ss_pred             eeeccCccceeEEEEEEccCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCC-CCceeeee------eeEeCCeEEE
Q psy8006          10 SIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCN-SRIVQLHQ------VFESSHDMIL   82 (126)
Q Consensus        10 ~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~-~~iv~l~~------~~~~~~~~~l   82 (126)
                      .+.++.|....+|+....  +..+++|.....   .   .....|..++..+..+ -.+++++.      .....+..++
T Consensus        37 ~~~l~gG~~n~~~~v~~~--~~~~vlk~~~~~---~---~~~~~e~~~l~~L~~~g~~vp~~~~~~~g~~~~~~~~~~~~  108 (346)
T 2q83_A           37 IDVIQGNQMALVWKVHTD--SGAVCLKRIHRP---E---KKALFSIFAQDYLAKKGMNVPGILPNKKGSLYSKHGSFLFV  108 (346)
T ss_dssp             EEECC----CEEEEEEET--TEEEEEEEECSC---H---HHHHHHHHHHHHHHHHTCSSCCBCCCTTSCSCEEETTEEEE
T ss_pred             eeeccccccCcEEEEEeC--CCCEEEEecCCC---H---HHHHHHHHHHHHHHHcCCCCCceeecCCCCEEEEECCEEEE
Confidence            345655678889988753  234889988752   1   2334455555544320 12233322      1134667899


Q ss_pred             EEeccCcccHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhhc
Q psy8006          83 LLELLTSAVDSKIRESFGSKSESGVQNCLEPSISVFSSLSK  123 (126)
Q Consensus        83 v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~l~~  123 (126)
                      ++++++|.++..       .+..    .+.++...++.||+
T Consensus       109 l~~~i~G~~~~~-------~~~~----~~~~~g~~La~lH~  138 (346)
T 2q83_A          109 VYDWIEGRPFEL-------TVKQ----DLEFIMKGLADFHT  138 (346)
T ss_dssp             EEECCCCBCCCT-------TSHH----HHHHHHHHHHHHHH
T ss_pred             EEEeecCccCCC-------CCHH----HHHHHHHHHHHHHH
Confidence            999999875430       1222    23556666666664

>3csv_A Aminoglycoside phosphotransferase; YP_614837.1, phosphotransferase enzyme family, structural genomics, JOIN for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP}

Probab=92.49  E-value=1.2  Score=28.74  Aligned_cols=102  Identities=12%  Similarity=0.041  Sum_probs=51.8

Q ss_pred             eeccCcccee-EEEEEEccCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCC-CCceeeeeeeEeCCeEEEEEeccC
Q psy8006          11 IINDMGKYAT-VRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCN-SRIVQLHQVFESSHDMILLLELLT   88 (126)
Q Consensus        11 ~~lg~g~~~~-v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~-~~iv~l~~~~~~~~~~~lv~e~~~   88 (126)
                      +.++.|.... +|+... ..+..+++|...+...     ..+..|+.++..+... -.+++++......+  +++||.++
T Consensus        24 ~~l~gg~s~~~~~r~~~-~~~~~~vlk~~~~~~~-----~~~~~e~~~l~~L~~~g~~vP~v~~~d~~~g--~ll~e~l~   95 (333)
T 3csv_A           24 TPLAGDASSRRYQRLRS-PTGAKAVLMDWSPEEG-----GDTQPFVDLAQYLRNLDISAPEIYAEEHARG--LLLIEDLG   95 (333)
T ss_dssp             CC--------CCEEEEC-TTCCEEEEEECCTTTT-----CCSHHHHHHHHHHHHTTCBCCCEEEEETTTT--EEEECCCC
T ss_pred             eECCCCCCCceEEEEEc-CCCCeEEEEECCCCCC-----ccccHHHHHHHHHHhCCCCCCceeeecCCCC--EEEEeeCC
Confidence            3455554443 445432 2255677775543321     1234566666665431 22344444422233  68999998


Q ss_pred             cccHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhhcc
Q psy8006          89 SAVDSKIRESFGSKSESGVQNCLEPSISVFSSLSKF  124 (126)
Q Consensus        89 ~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~l~~~  124 (126)
                      +.++.+.+... ...+   .....++...+..||..
T Consensus        96 ~~~l~~~l~~~-~~~~---~~~~~~~~~~La~lH~~  127 (333)
T 3csv_A           96 DALFTEVINND-PAQE---MPLYRAAVDLLIHLHDA  127 (333)
T ss_dssp             SCBHHHHHHHC-GGGH---HHHHHHHHHHHHHHHTS
T ss_pred             CcchHHHhcCC-CccH---HHHHHHHHHHHHHHhcC
Confidence            87777766542 1221   35667888888888864

>1zyl_A Hypothetical protein YIHE; putative protein kinase, structural genomics, PSI, protein structure initiative; 2.80A {Escherichia coli} SCOP: d.144.1.6

Probab=92.33  E-value=0.91  Score=29.11  Aligned_cols=96  Identities=10%  Similarity=0.093  Sum_probs=54.8

Q ss_pred             eccCccceeEEEEEEccCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCC-CCceeeeee-----eEeCCeEEEEEe
Q psy8006          12 INDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCN-SRIVQLHQV-----FESSHDMILLLE   85 (126)
Q Consensus        12 ~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~-~~iv~l~~~-----~~~~~~~~lv~e   85 (126)
                      .++ |....+|.... ..|..+++|..++....   ...+..|..++..+..+ -.+++++..     ....+..+++++
T Consensus        33 ~l~-g~~n~~y~v~~-~~g~~~vlK~~~~~~~~---~~~~~~E~~~~~~L~~~g~~vp~~~~~~g~~~~~~~g~~~~l~~  107 (328)
T 1zyl_A           33 PLN-SYENRVYQFQD-EDRRRFVVKFYRPERWT---ADQILEEHQFALQLVNDEVPVAAPVAFNGQTLLNHQGFYFAVFP  107 (328)
T ss_dssp             EEC-CSSSEEEEECC-TTCCCEEEEEECTTTSC---HHHHHHHHHHHHHHHHTTCSBCCCCCBTTBSCEEETTEEEEEEE
T ss_pred             eec-CcccceEEEEc-CCCCEEEEEEcCCCCCC---HHHHHHHHHHHHHHHHcCCeecceeecCCcEEEEECCEEEEEEE
Confidence            455 66677887654 34557899988754322   23566777777776531 113333322     223556788999


Q ss_pred             ccCcccHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhhc
Q psy8006          86 LLTSAVDSKIRESFGSKSESGVQNCLEPSISVFSSLSK  123 (126)
Q Consensus        86 ~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~l~~  123 (126)
                      ++++.++.       ..+..    .+.++...++.||.
T Consensus       108 ~i~G~~~~-------~~~~~----~~~~~g~~La~lH~  134 (328)
T 1zyl_A          108 SVGGRQFE-------ADNID----QMEAVGRYLGRMHQ  134 (328)
T ss_dssp             CCCCEECC-------SSCHH----HHHHHHHHHHHHHH
T ss_pred             ecCCCCCC-------CCCHH----HHHHHHHHHHHHHH
Confidence            99987542       11222    23556666666664

>2qg7_A Ethanolamine kinase PV091845; malaria, SGC, structural genomics consortium, transferase; 2.41A {Plasmodium vivax}

Probab=90.92  E-value=2.7  Score=28.78  Aligned_cols=102  Identities=10%  Similarity=0.031  Sum_probs=60.2

Q ss_pred             ceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeEEEEEeccC
Q psy8006           9 SSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLLELLT   88 (126)
Q Consensus         9 ~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~~lv~e~~~   88 (126)
                      ..+.|+.|....+|+......+..+.+|+.......-.   .-.+|..++..+....-.+++++.+.  +  ..++||++
T Consensus       112 ~i~~lsgG~tN~~y~v~~~~~~~~~vLRi~g~~~~~~i---dR~~E~~vl~~L~~~gl~P~ll~~~~--~--G~v~e~I~  184 (458)
T 2qg7_A          112 EFQIINGGITNILIKVKDMSKQAKYLIRLYGPKTDEII---NREREKKISCILYNKNIAKKIYVFFT--N--GRIEEFMD  184 (458)
T ss_dssp             EEEEECC--CEEEEEEEETTTTEEEEEEEECC-CCSCS---CHHHHHHHHHHHTTSSSBCCEEEEET--T--EEEEECCC
T ss_pred             EEEEcCCCeEeEEEEEEECCCCceEEEEECCCChhhhc---CHHHHHHHHHHHHhcCCCCCEEEEeC--C--eEEEEeeC
Confidence            45567778888899887654346788887643211100   12478888888876222345565552  2  24999999


Q ss_pred             cccHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhhccC
Q psy8006          89 SAVDSKIRESFGSKSESGVQNCLEPSISVFSSLSKFE  125 (126)
Q Consensus        89 ~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~l~~~~  125 (126)
                      +.++..     ..+...   .+..+++..|+.||...
T Consensus       185 G~~l~~-----~~l~~~---~~~~~ia~~La~LH~~~  213 (458)
T 2qg7_A          185 GYALSR-----EDIKNP---KFQKLIAKNLKLLHDIK  213 (458)
T ss_dssp             SEECCT-----TTTTSH---HHHHHHHHHHHHHHTCC
T ss_pred             CccCCh-----hhcCCH---HHHHHHHHHHHHHhcCC
Confidence            876531     112211   35677888888888753

>3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 2.55A {Mesorhizobium loti}

Probab=88.60  E-value=3.3  Score=26.28  Aligned_cols=96  Identities=9%  Similarity=0.002  Sum_probs=54.2

Q ss_pred             eeeccCccceeEEEEEEccCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCc-eeeeeeeEeCCeEEEEEecc-
Q psy8006          10 SIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRI-VQLHQVFESSHDMILLLELL-   87 (126)
Q Consensus        10 ~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i-v~l~~~~~~~~~~~lv~e~~-   87 (126)
                      .+.++.|....+|..      ..+.+|..........   ...+|..++..+.. .++ .+++..  .++.-++++||+ 
T Consensus        23 i~~l~gG~tN~~~~~------~~~vlR~~~~~~~~~~---~r~~E~~~l~~l~~-~g~~P~~~~~--~~~~~~~v~e~i~   90 (301)
T 3dxq_A           23 PLERLGGLTNLVFRA------GDLCLRIPGKGTEEYI---NRANEAVAAREAAK-AGVSPEVLHV--DPATGVMVTRYIA   90 (301)
T ss_dssp             CEEEESCSSEEEEEE------TTEEEEEECC----CC---CHHHHHHHHHHHHH-TTSSCCEEEE--CTTTCCEEEECCT
T ss_pred             eeEcCCcccccccee------eeEEEECCCCCcccee---CHHHHHHHHHHHHH-cCCCCceEEE--ECCCCEEEEeecC
Confidence            567788888889987      3478887764321100   12457777776654 222 344433  233346889999 


Q ss_pred             CcccHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhhcc
Q psy8006          88 TSAVDSKIRESFGSKSESGVQNCLEPSISVFSSLSKF  124 (126)
Q Consensus        88 ~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~l~~~  124 (126)
                      ++.++.......       ...+..+++..++-||..
T Consensus        91 ~g~~l~~~~~~~-------~~~~~~~~~~~La~lH~~  120 (301)
T 3dxq_A           91 GAQTMSPEKFKT-------RPGSPARAGEAFRKLHGS  120 (301)
T ss_dssp             TCEECCHHHHHH-------STTHHHHHHHHHHHHHTS
T ss_pred             CCccCCHhhHhh-------hHHHHHHHHHHHHHHhCC
Confidence            666553211100       012566777888888864

>2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6

Probab=87.82  E-value=3.8  Score=26.11  Aligned_cols=98  Identities=8%  Similarity=-0.057  Sum_probs=51.9

Q ss_pred             ceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCC-Cceeeeee------eEeCCeEE
Q psy8006           9 SSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNS-RIVQLHQV------FESSHDMI   81 (126)
Q Consensus         9 ~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~-~iv~l~~~------~~~~~~~~   81 (126)
                      .-+.++.|....+|..... .+ .+++|....... .   ..+..|..++..+..+. .++++...      ....+..+
T Consensus        26 ~~~~i~~G~~n~~~~v~~~-~g-~~vlk~~~~~~~-~---~~l~~e~~~l~~L~~~g~~vP~~~~~~~g~~~~~~~g~~~   99 (322)
T 2ppq_A           26 SYKGIAEGVENSNFLLHTT-KD-PLILTLYEKRVE-K---NDLPFFLGLMQHLAAKGLSCPLPLPRKDGELLGELSGRPA   99 (322)
T ss_dssp             EEEEECC---EEEEEEEES-SC-CEEEEEECC----C---CHHHHHHHHHHHHHHTTCCCCCBCCBTTCCSCEEETTEEE
T ss_pred             EeeccCCCcccceEEEEeC-Cc-cEEEEEeCCCCC-H---HHHHHHHHHHHHHHHCCCCCCcccCCCCCCEEEEECCEEE
Confidence            3456677877888887653 23 578898875311 1   13556777777665311 12222211      12345678


Q ss_pred             EEEeccCcccHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhhc
Q psy8006          82 LLLELLTSAVDSKIRESFGSKSESGVQNCLEPSISVFSSLSK  123 (126)
Q Consensus        82 lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~l~~  123 (126)
                      +++++++|..+..       .+.    ..+.++..+++.||.
T Consensus       100 ~l~~~l~G~~~~~-------~~~----~~~~~~g~~La~lH~  130 (322)
T 2ppq_A          100 ALISFLEGMWLRK-------PEA----KHCREVGKALAAMHL  130 (322)
T ss_dssp             EEEECCCCBCCSS-------CCH----HHHHHHHHHHHHHHH
T ss_pred             EEEEeCCCcCCCC-------CCH----HHHHHHHHHHHHHHH
Confidence            9999999875421       122    234555566666664

>3c5i_A Choline kinase; choline, kinase, malaria, transferase, structural genomics, structural genomics consortium; 2.20A {Plasmodium knowlesi} PDB: 3fi8_A*

Probab=86.21  E-value=4.7  Score=26.38  Aligned_cols=100  Identities=12%  Similarity=-0.031  Sum_probs=53.0

Q ss_pred             ceeeccCccceeEEEEEEcc--------CCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeE
Q psy8006           9 SSIINDMGKYATVRRCRDRK--------NGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDM   80 (126)
Q Consensus         9 ~~~~lg~g~~~~v~~~~~~~--------~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~   80 (126)
                      ..+.++.|....+|+.....        .+..+.+|+.....  .. ......|..++..+..+.-.++++...  ++  
T Consensus        37 ~~~~l~~G~~N~~y~v~~~~~~~~~~~~~~~~~vlRi~~~~~--~~-~~~~~~E~~~l~~L~~~g~~P~~~~~~--~~--  109 (369)
T 3c5i_A           37 RVKQILSGLTNQLFEVGLKEETANNYNSIRTRVLFRIYGKHV--DE-LYNTISEFEVYKTMSKYKIAPQLLNTF--NG--  109 (369)
T ss_dssp             EEEEC----CCEEEEEEECHHHHTTCTTSCCEEEEEECCTTG--GG-TSCHHHHHHHHHHHHHTTSSCCEEEEE--TT--
T ss_pred             EEEEeCCcccceEEEEEeCCCCcccccCCCceEEEEecCCCc--cc-eecHHHHHHHHHHHHhcCCCCceEEec--CC--
Confidence            45567778777888887543        12567888765421  11 112356777777775422233444333  22  


Q ss_pred             EEEEeccCcccHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhhc
Q psy8006          81 ILLLELLTSAVDSKIRESFGSKSESGVQNCLEPSISVFSSLSK  123 (126)
Q Consensus        81 ~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~l~~  123 (126)
                      +++++|+++.++..-     .+..   ...+.++...++.||.
T Consensus       110 ~~v~e~i~G~~l~~~-----~~~~---~~~~~~~a~~La~lH~  144 (369)
T 3c5i_A          110 GRIEEWLYGDPLRID-----DLKN---PTILIGIANVLGKFHT  144 (369)
T ss_dssp             EEEEECCCSEECCGG-----GGGC---HHHHHHHHHHHHHHHT
T ss_pred             cEEEEEecCCcCChh-----hcCC---hHHHHHHHHHHHHHHc
Confidence            679999998654210     0111   1235667777777775

>3mes_A Choline kinase; malaria, structural genomics, structural genomics consortium, SGC, transferase; HET: ADP DME PT3; 2.35A {Cryptosporidium parvum}

Probab=85.51  E-value=6.7  Score=26.66  Aligned_cols=103  Identities=9%  Similarity=-0.085  Sum_probs=59.1

Q ss_pred             ccceeeccCccceeEEEEEEccC-------CcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCe
Q psy8006           7 IISSIINDMGKYATVRRCRDRKN-------GTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHD   79 (126)
Q Consensus         7 ~~~~~~lg~g~~~~v~~~~~~~~-------~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~   79 (126)
                      .+..+.+..|....+|+......       +..+.+|+-.... . . .-...+|..++..+....-.+++++.+  ++ 
T Consensus        72 ~~~v~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlRi~g~~t-~-~-~idR~~E~~~l~~L~~~gi~P~l~~~~--~~-  145 (424)
T 3mes_A           72 YIEVKQIFSGLTNQLFVVSIVNESMSLSLKHPRILFRIYGKHV-G-K-FYDSKVELDVFRYLSNINIAPNIIADF--PE-  145 (424)
T ss_dssp             GEEEEEECCCSSSEEEEEEECCC-----CCCSEEEEEECCCCC---C-CCCHHHHHHHHHHHHHTTSSCCEEEEE--TT-
T ss_pred             ceEEEEcCCCcccceEEEEeCCCcccccCCCCeEEEEECCCCc-c-h-hcCHHHHHHHHHHHHhcCCCCCEEEEc--CC-
Confidence            34456677777778888876421       4678888754321 1 1 001346777777775422233444322  22 


Q ss_pred             EEEEEeccCcccHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhhcc
Q psy8006          80 MILLLELLTSAVDSKIRESFGSKSESGVQNCLEPSISVFSSLSKF  124 (126)
Q Consensus        80 ~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~l~~~  124 (126)
                       +.|++|+++.++..     ..+..   ..+..+++..++.||..
T Consensus       146 -~~I~efI~G~~l~~-----~~l~~---~~~~~~ia~~La~LH~~  181 (424)
T 3mes_A          146 -GRIEEFIDGEPLTT-----KQLQL---THICVEVAKNMGSLHII  181 (424)
T ss_dssp             -EEEEECCCSEECCT-----GGGGS---HHHHHHHHHHHHHHHTH
T ss_pred             -CEEEEEeCCccCCh-----hhcCC---HHHHHHHHHHHHHHhcC
Confidence             67899999976521     01111   12566788888888864

>3i1a_A Spectinomycin phosphotransferase; protein kinase, aminoglycoside phosphotransferase, antibiotic resistance; HET: MES PG4; 1.70A {Legionella pneumophila} PDB: 3i0q_A* 3i0o_A* 3q2m_A*

Probab=81.66  E-value=8.5  Score=24.98  Aligned_cols=88  Identities=8%  Similarity=0.020  Sum_probs=51.3

Q ss_pred             ceeEEEEEEccCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCC--CCceeeeee------eEeCCeEEEEEeccCc
Q psy8006          18 YATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCN--SRIVQLHQV------FESSHDMILLLELLTS   89 (126)
Q Consensus        18 ~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~--~~iv~l~~~------~~~~~~~~lv~e~~~~   89 (126)
                      ...+|+.... .+ .+++|.......        .+|..++..+..+  |.+++....      ....+..+++|+|++|
T Consensus        36 ~N~vy~v~~~-~g-~~vLK~~~~~~~--------~~E~~~l~~L~~~g~~~vp~pi~~~~G~~~~~~~g~~~~l~~~i~G  105 (339)
T 3i1a_A           36 NAFAYQADSE-SK-SYFIKLKYGYHD--------EINLSIIRLLHDSGIKEIIFPIHTLEAKLFQQLKHFKIIAYPFIHA  105 (339)
T ss_dssp             SCEEEEEECS-SC-EEEEEEEECSSC--------CHHHHHHHHHHHTTCCSSCCCCCCTTSCSSEECSSEEEEEEECCCC
T ss_pred             ccceEEEEeC-CC-CEEEEEecCccc--------hHHHHHHHHHHhcCCcccccceecCCCCEEEEECCEEEEEEeccCC
Confidence            5678887653 34 789998776542        2344444444321  223333321      2335678999999998


Q ss_pred             ccHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhhcc
Q psy8006          90 AVDSKIRESFGSKSESGVQNCLEPSISVFSSLSKF  124 (126)
Q Consensus        90 ~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~l~~~  124 (126)
                      ..+.     ....+...    +.++..+++.||+.
T Consensus       106 ~~~~-----~~~~~~~~----~~~lg~~La~LH~~  131 (339)
T 3i1a_A          106 PNGF-----TQNLTGKQ----WKQLGKVLRQIHET  131 (339)
T ss_dssp             CBTT-----TSCCCHHH----HHHHHHHHHHHHTC
T ss_pred             CcCc-----ccCCCHHH----HHHHHHHHHHHhCc
Confidence            8652     12244433    35677888888875

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	126
d1jksa_	293	d.144.1.7 (A:) Death-associated protein kinase, Da	1e-11
d1koaa2	350	d.144.1.7 (A:5915-6264) Twitchin, kinase domain {C	4e-11
d1koba_	352	d.144.1.7 (A:) Twitchin, kinase domain {California	5e-11
d1phka_	277	d.144.1.7 (A:) gamma-subunit of glycogen phosphory	8e-11
d1s9ja_	322	d.144.1.7 (A:) Dual specificity mitogen-activated	1e-10
d1a06a_	307	d.144.1.7 (A:) Calmodulin-dependent protein kinase	2e-10
d1ob3a_	286	d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmod	2e-10
d1nvra_	271	d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {	2e-10
d2gfsa1	348	d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sa	3e-10
d1u5ra_	309	d.144.1.7 (A:) Serine/threonine protein kinase TAO	4e-10
d1gz8a_	298	d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (H	4e-10
d1xjda_	320	d.144.1.7 (A:) Protein kinase C, theta type {Human	4e-10
d1uu3a_	288	d.144.1.7 (A:) 3-phosphoinositide dependent protei	7e-10
d1unla_	292	d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (H	9e-10
d3bqca1	328	d.144.1.7 (A:3-330) Protein kinase CK2, alpha subu	1e-09
d1yhwa1	293	d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [	1e-09
d1t4ha_	270	d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sa	2e-09
d2java1	269	d.144.1.7 (A:3-271) Serine/threonine-protein kinas	2e-09
d1cm8a_	346	d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo s	2e-09
d1tkia_	321	d.144.1.7 (A:) Titin, kinase domain {Human (Homo s	3e-09
d1ua2a_	299	d.144.1.7 (A:) Cell division protein kinase 7, CDK	3e-09
d2jfla1	288	d.144.1.7 (A:21-308) STE20-like serine/threonine-p	3e-09
d1omwa3	364	d.144.1.7 (A:186-549) G-protein coupled receptor k	5e-09
d2j4za1	263	d.144.1.7 (A:126-388) Aurora-related kinase 1 (aur	7e-09
d3blha1	318	d.144.1.7 (A:8-325) Cell division protein kinase 9	1e-08
d1o6ya_	277	d.144.1.7 (A:) Mycobacterial protein kinase PknB,	1e-08
d1xwsa_	273	d.144.1.7 (A:) Proto-oncogene serine/threonine-pro	1e-08
d1ckia_	299	d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus n	1e-08
d2b1pa1	355	d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3	1e-08
d1fota_	316	d.144.1.7 (A:) cAMP-dependent PK, catalytic subuni	2e-08
d1csna_	293	d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast	2e-08
d1pmea_	345	d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapien	2e-08
d1o6la_	337	d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sap	1e-07
d1opja_	287	d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mou	1e-07
d1fvra_	309	d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [	2e-07
d1vzoa_	322	d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5	3e-07
d2ozaa1	335	d.144.1.7 (A:51-385) MAP kinase activated protein	4e-07
d1q8ya_	362	d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces	5e-07
d1t46a_	311	d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens	5e-07
d1rjba_	325	d.144.1.7 (A:) Fl cytokine receptor {Human (Homo s	6e-07
d1blxa_	305	d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (H	2e-06
d1q5ka_	350	d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gs	3e-06
d1sm2a_	263	d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Hu	3e-06
d1rdqe_	350	d.144.1.7 (E:) cAMP-dependent PK, catalytic subuni	5e-06
d1uwha_	276	d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens)	7e-05
d1byga_	262	d.144.1.7 (A:) Carboxyl-terminal src kinase (csk)	1e-04

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 57.8 bits (139), Expect = 1e-11
 Identities = 29/76 (38%), Positives = 53/76 (69%), Gaps = 5/76 (6%)

Query: 16 GKYATVRRCRDRKNGTQYAAKFLRKKR----RSTDLKAEILHEVAVLEACRCNSRIVQLH 71
          G++A V++CR++  G QYAAKF++K+R    R    + +I  EV++L+  + +  ++ LH
Sbjct: 21 GQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ-HPNVITLH 79

Query: 72 QVFESSHDMILLLELL 87
          +V+E+  D+IL+LEL+
Sbjct: 80 EVYENKTDVILILELV 95

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

 Score = 56.2 bits (135), Expect = 4e-11
 Identities = 20/72 (27%), Positives = 35/72 (48%), Gaps = 3/72 (4%)

Query: 16  GKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFE 75
           G +  V R  +R  G  +AAKF+     S   K  +  E+  +   R +  +V LH  FE
Sbjct: 37  GAFGVVHRVTERATGNNFAAKFVMTPHESD--KETVRKEIQTMSVLR-HPTLVNLHDAFE 93

Query: 76  SSHDMILLLELL 87
             ++M+++ E +
Sbjct: 94  DDNEMVMIYEFM 105

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]} Length = 352

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

 Score = 56.2 bits (135), Expect = 5e-11
 Identities = 19/72 (26%), Positives = 38/72 (52%), Gaps = 3/72 (4%)

Query: 16  GKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFE 75
           G +  V RC ++  G  + AKF+         K  + +E++++     + +++ LH  FE
Sbjct: 40  GAFGVVHRCVEKATGRVFVAKFINTPYPLD--KYTVKNEISIMNQLH-HPKLINLHDAFE 96

Query: 76  SSHDMILLLELL 87
             ++M+L+LE L
Sbjct: 97  DKYEMVLILEFL 108

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

 Score = 55.1 bits (132), Expect = 8e-11
 Identities = 19/79 (24%), Positives = 34/79 (43%), Gaps = 7/79 (8%)

Query: 16 GKYATVRRCRDRKNGTQYAAKFLRK-------KRRSTDLKAEILHEVAVLEACRCNSRIV 68
          G  + VRRC  +    +YA K +              +L+   L EV +L     +  I+
Sbjct: 14 GVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNII 73

Query: 69 QLHQVFESSHDMILLLELL 87
          QL   +E++    L+ +L+
Sbjct: 74 QLKDTYETNTFFFLVFDLM 92

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 55.1 bits (132), Expect = 1e-10
 Identities = 15/72 (20%), Positives = 32/72 (44%), Gaps = 2/72 (2%)

Query: 16 GKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFE 75
          G    V +   + +G   A K +  + +   ++ +I+ E+ VL  C     IV  +  F 
Sbjct: 17 GNGGVVFKVSHKPSGLVMARKLIHLEIKP-AIRNQIIRELQVLHECNSP-YIVGFYGAFY 74

Query: 76 SSHDMILLLELL 87
          S  ++ + +E +
Sbjct: 75 SDGEISICMEHM 86

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 307

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 54.3 bits (130), Expect = 2e-10
 Identities = 18/72 (25%), Positives = 36/72 (50%), Gaps = 2/72 (2%)

Query: 16 GKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFE 75
          G ++ V    D++     A K + KK      +  + +E+AVL   + +  IV L  ++E
Sbjct: 20 GAFSEVILAEDKRTQKLVAIKCIAKKALEGK-EGSMENEIAVLHKIK-HPNIVALDDIYE 77

Query: 76 SSHDMILLLELL 87
          S   + L+++L+
Sbjct: 78 SGGHLYLIMQLV 89

>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]} Length = 286

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: (Plasmodium falciparum) [TaxId: 5833]

 Score = 54.1 bits (129), Expect = 2e-10
 Identities = 18/96 (18%), Positives = 44/96 (45%), Gaps = 2/96 (2%)

Query: 16  GKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFE 75
           G Y  V + ++   G  +A K +R ++    + +  + E+++L+  + +  IV+L+ V  
Sbjct: 13  GTYGVVYKAQN-NYGETFALKKIRLEKEDEGIPSTTIREISILKELKHS-NIVKLYDVIH 70

Query: 76  SSHDMILLLELLTSAVDSKIRESFGSKSESGVQNCL 111
           +   ++L+ E L   +   +    G       ++ L
Sbjct: 71  TKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFL 106

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 271

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 53.9 bits (129), Expect = 2e-10
 Identities = 18/94 (19%), Positives = 31/94 (32%), Gaps = 2/94 (2%)

Query: 16  GKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFE 75
           G Y  V+   +R      A K +  K R+ D    I  E+ + +    +  +V+ +    
Sbjct: 16  GAYGEVQLAVNRVTEEAVAVKIVDMK-RAVDCPENIKKEICINKMLN-HENVVKFYGHRR 73

Query: 76  SSHDMILLLELLTSAVDSKIRESFGSKSESGVQN 109
             +   L LE  +        E      E   Q 
Sbjct: 74  EGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQR 107

>d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]} Length = 348

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 53.7 bits (128), Expect = 3e-10
 Identities = 15/65 (23%), Positives = 28/65 (43%), Gaps = 1/65 (1%)

Query: 16 GKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFE 75
          G Y +V    D K G + A K L +  +S         E+ +L+  + +  ++ L  VF 
Sbjct: 29 GAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMK-HENVIGLLDVFT 87

Query: 76 SSHDM 80
           +  +
Sbjct: 88 PARSL 92

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 309

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 53.5 bits (128), Expect = 4e-10
 Identities = 18/81 (22%), Positives = 35/81 (43%), Gaps = 4/81 (4%)

Query: 10 SIINDMGK--YATVRRCRDRKNGTQYAAKFLRK-KRRSTDLKAEILHEVAVLEACRCNSR 66
          S + ++G   +  V   RD +N    A K +    ++S +   +I+ EV  L+  R  + 
Sbjct: 18 SDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPN- 76

Query: 67 IVQLHQVFESSHDMILLLELL 87
           +Q    +   H   L++E  
Sbjct: 77 TIQYRGCYLREHTAWLVMEYC 97

>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]} Length = 298

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 53.7 bits (128), Expect = 4e-10
 Identities = 18/87 (20%), Positives = 39/87 (44%), Gaps = 1/87 (1%)

Query: 16  GKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFE 75
           G Y  V + R++  G   A K +R    +  + +  + E+++L+    +  IV+L  V  
Sbjct: 13  GTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN-HPNIVKLLDVIH 71

Query: 76  SSHDMILLLELLTSAVDSKIRESFGSK 102
           + + + L+ E L   +   +  S  + 
Sbjct: 72  TENKLYLVFEFLHQDLKKFMDASALTG 98

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]} Length = 320

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 53.6 bits (128), Expect = 4e-10
 Identities = 15/73 (20%), Positives = 29/73 (39%), Gaps = 1/73 (1%)

Query: 16 GKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAE-ILHEVAVLEACRCNSRIVQLHQVF 74
          G +  V     +K    +A K L+K     D   E  + E  VL     +  +  +   F
Sbjct: 13 GSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTF 72

Query: 75 ESSHDMILLLELL 87
          ++  ++  ++E L
Sbjct: 73 QTKENLFFVMEYL 85

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 52.7 bits (126), Expect = 7e-10
 Identities = 19/97 (19%), Positives = 34/97 (35%), Gaps = 2/97 (2%)

Query: 16  GKYATVRRCRDRKNGTQYAAKFLRKKR-RSTDLKAEILHEVAVLEACRCNSRIVQLHQVF 74
           G ++TV   R+     +YA K L K+     +    +  E  V+         V+L+  F
Sbjct: 19  GSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF-FVKLYFTF 77

Query: 75  ESSHDMILLLELLTSAVDSKIRESFGSKSESGVQNCL 111
           +    +   L    +    K     GS  E+  +   
Sbjct: 78  QDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYT 114

>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]} Length = 292

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK5
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 52.6 bits (125), Expect = 9e-10
 Identities = 19/70 (27%), Positives = 34/70 (48%), Gaps = 1/70 (1%)

Query: 16 GKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFE 75
          G Y TV + ++R+     A K +R       + +  L E+ +L+  +  + IV+LH V  
Sbjct: 13 GTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKN-IVRLHDVLH 71

Query: 76 SSHDMILLLE 85
          S   + L+ E
Sbjct: 72 SDKKLTLVFE 81

>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]} Length = 328

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase CK2, alpha subunit
species: Rattus norvegicus [TaxId: 10116]

 Score = 52.2 bits (124), Expect = 1e-09
 Identities = 15/71 (21%), Positives = 27/71 (38%), Gaps = 5/71 (7%)

Query: 16  GKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFE 75
           GKY+ V    +  N  +   K L+  ++      +I  E+ +LE  R    I+ L  + +
Sbjct: 46  GKYSEVFEAINITNNEKVVVKILKPVKKK-----KIKREIKILENLRGGPNIITLADIVK 100

Query: 76  SSHDMILLLEL 86
                   L  
Sbjct: 101 DPVSRTPALVF 111

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 51.9 bits (124), Expect = 1e-09
 Identities = 15/72 (20%), Positives = 32/72 (44%), Gaps = 3/72 (4%)

Query: 16 GKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFE 75
          G   TV    D   G + A + +  +++    K  I++E+ V+   + N  IV     + 
Sbjct: 31 GASGTVYTAMDVATGQEVAIRQMNLQQQPK--KELIINEILVMRENK-NPNIVNYLDSYL 87

Query: 76 SSHDMILLLELL 87
             ++ +++E L
Sbjct: 88 VGDELWVVMEYL 99

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 270

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 51.5 bits (123), Expect = 2e-09
 Identities = 17/98 (17%), Positives = 42/98 (42%), Gaps = 5/98 (5%)

Query: 16  GKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFE 75
           G + TV +  D +   + A   L+ ++ +   +     E  +L+  +  +  V+ +  +E
Sbjct: 20  GSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNI-VRFYDSWE 78

Query: 76  SS----HDMILLLELLTSAVDSKIRESFGSKSESGVQN 109
           S+      ++L+ EL+TS       + F       +++
Sbjct: 79  STVKGKKCIVLVTELMTSGTLKTYLKRFKVMKIKVLRS 116

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]} Length = 269

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 51.1 bits (122), Expect = 2e-09
 Identities = 13/74 (17%), Positives = 31/74 (41%), Gaps = 3/74 (4%)

Query: 16 GKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVF- 74
          G Y   ++ R + +G     K L     +   K  ++ EV +L   +  + IV+ +    
Sbjct: 15 GSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPN-IVRYYDRII 73

Query: 75 -ESSHDMILLLELL 87
            ++  + +++E  
Sbjct: 74 DRTNTTLYIVMEYC 87

>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]} Length = 346

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38-gamma
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 51.4 bits (122), Expect = 2e-09
 Identities = 15/71 (21%), Positives = 27/71 (38%), Gaps = 1/71 (1%)

Query: 16 GKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFE 75
          G Y  V    D + G + A K L +  +S         E+ +L+  R +  ++ L  VF 
Sbjct: 29 GAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMR-HENVIGLLDVFT 87

Query: 76 SSHDMILLLEL 86
              +    + 
Sbjct: 88 PDETLDDFTDF 98

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]} Length = 321

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 51.2 bits (122), Expect = 3e-09
 Identities = 19/72 (26%), Positives = 39/72 (54%), Gaps = 4/72 (5%)

Query: 16 GKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFE 75
          G++  V RC +  +   Y AKF++ K      +  +  E+++L   R  + I+ LH+ FE
Sbjct: 16 GEFGIVHRCVETSSKKTYMAKFVKVKGTD---QVLVKKEISILNIARHRN-ILHLHESFE 71

Query: 76 SSHDMILLLELL 87
          S  +++++ E +
Sbjct: 72 SMEELVMIFEFI 83

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 51.0 bits (121), Expect = 3e-09
 Identities = 19/93 (20%), Positives = 43/93 (46%), Gaps = 4/93 (4%)

Query: 16  GKYATVRRCRDRKNGTQYAAKFLRKKRRST---DLKAEILHEVAVLEACRCNSRIVQLHQ 72
           G++ATV + RD+      A K ++   RS     +    L E+ +L+    +  I+ L  
Sbjct: 9   GQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELS-HPNIIGLLD 67

Query: 73  VFESSHDMILLLELLTSAVDSKIRESFGSKSES 105
            F    ++ L+ + + + ++  I+++    + S
Sbjct: 68  AFGHKSNISLVFDFMETDLEVIIKDNSLVLTPS 100

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 50.8 bits (121), Expect = 3e-09
 Identities = 16/72 (22%), Positives = 36/72 (50%), Gaps = 3/72 (4%)

Query: 16 GKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFE 75
          G +  V + ++++     AAK +  K  S +   + + E+ +L +C   + IV+L   F 
Sbjct: 23 GAFGKVYKAQNKETSVLAAAKVIDTK--SEEELEDYMVEIDILASCDHPN-IVKLLDAFY 79

Query: 76 SSHDMILLLELL 87
            +++ +L+E  
Sbjct: 80 YENNLWILIEFC 91

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]} Length = 364

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 50.5 bits (120), Expect = 5e-09
 Identities = 24/92 (26%), Positives = 37/92 (40%), Gaps = 10/92 (10%)

Query: 1  MNN--IKNIISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKR-RSTDLKAEILHEVAV 57
          MN+  +  II       G +  V  CR    G  YA K L KKR +    +   L+E  +
Sbjct: 3  MNDFSVHRIIGR-----GGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIM 57

Query: 58 LEACRCNS--RIVQLHQVFESSHDMILLLELL 87
          L          IV +   F +   +  +L+L+
Sbjct: 58 LSLVSTGDCPFIVCMSYAFHTPDKLSFILDLM 89

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 49.6 bits (118), Expect = 7e-09
 Identities = 17/71 (23%), Positives = 35/71 (49%), Gaps = 2/71 (2%)

Query: 16 GKYATVRRCRDRKNGTQYAAKFLRKKR-RSTDLKAEILHEVAVLEACRCNSRIVQLHQVF 74
          GK+  V   R++++    A K L K +     ++ ++  EV +    R  + I++L+  F
Sbjct: 17 GKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN-ILRLYGYF 75

Query: 75 ESSHDMILLLE 85
            +  + L+LE
Sbjct: 76 HDATRVYLILE 86

>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]} Length = 318

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 9, CDK9
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 49.5 bits (117), Expect = 1e-08
 Identities = 13/70 (18%), Positives = 28/70 (40%), Gaps = 1/70 (1%)

Query: 16 GKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFE 75
          G +  V + R RK G + A K +  +          L E+ +L+  +  + +V L ++  
Sbjct: 21 GTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHEN-VVNLIEICR 79

Query: 76 SSHDMILLLE 85
          +        +
Sbjct: 80 TKASPYNRCK 89

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score = 49.4 bits (117), Expect = 1e-08
 Identities = 15/74 (20%), Positives = 23/74 (31%), Gaps = 2/74 (2%)

Query: 16 GKYATVRRCRDRKNGTQYAAKFLRKKR-RSTDLKAEILHEVAVLEACRCNSRIVQLHQVF 74
          G  + V   RD +     A K LR    R          E     A   +  IV ++   
Sbjct: 18 GGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALN-HPAIVAVYDTG 76

Query: 75 ESSHDMILLLELLT 88
          E+      L  ++ 
Sbjct: 77 EAETPAGPLPYIVM 90

>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Proto-oncogene serine/threonine-protein kinase Pim-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 49.3 bits (117), Expect = 1e-08
 Identities = 16/77 (20%), Positives = 29/77 (37%), Gaps = 5/77 (6%)

Query: 16 GKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAE----ILHEVAVLEACRCNSR-IVQL 70
          G + +V       +    A K + K R S   +      +  EV +L+        +++L
Sbjct: 15 GGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRL 74

Query: 71 HQVFESSHDMILLLELL 87
             FE     +L+LE  
Sbjct: 75 LDWFERPDSFVLILERP 91

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 49.1 bits (116), Expect = 1e-08
 Identities = 13/96 (13%), Positives = 30/96 (31%), Gaps = 4/96 (4%)

Query: 16  GKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFE 75
           G +  +    D   G + A K    K +      ++  E  + +  +    I  +     
Sbjct: 18  GSFGDIYLGTDIAAGEEVAIKLECVKTK----HPQLHIESKIYKMMQGGVGIPTIRWCGA 73

Query: 76  SSHDMILLLELLTSAVDSKIRESFGSKSESGVQNCL 111
                ++++ELL  +++          S   V    
Sbjct: 74  EGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLA 109

>d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]} Length = 355

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-jun N-terminal kinase (jnk3s)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 49.2 bits (116), Expect = 1e-08
 Identities = 11/65 (16%), Positives = 20/65 (30%), Gaps = 1/65 (1%)

Query: 16 GKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFE 75
          G    V    D       A K L +  ++         E+ +++       I+ L  VF 
Sbjct: 28 GAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHK-NIISLLNVFT 86

Query: 76 SSHDM 80
              +
Sbjct: 87 PQKTL 91

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 316

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 48.6 bits (115), Expect = 2e-08
 Identities = 15/73 (20%), Positives = 30/73 (41%), Gaps = 2/73 (2%)

Query: 16 GKYATVRRCRDRKNGTQYAAKFLRKKR-RSTDLKAEILHEVAVLEACRCNSRIVQLHQVF 74
          G +  V   R R NG  YA K L+K+             E  +L        I+++   F
Sbjct: 15 GSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPF-IIRMWGTF 73

Query: 75 ESSHDMILLLELL 87
          + +  + ++++ +
Sbjct: 74 QDAQQIFMIMDYI 86

>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

 Score = 48.7 bits (115), Expect = 2e-08
 Identities = 14/72 (19%), Positives = 29/72 (40%), Gaps = 4/72 (5%)

Query: 16 GKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFE 75
          G +  +    +  N  Q A KF  ++  +  L+ E      +L  C     I  ++   +
Sbjct: 16 GSFGVIFEGTNLLNNQQVAIKFEPRRSDAPQLRDEY-RTYKLLAGCTG---IPNVYYFGQ 71

Query: 76 SSHDMILLLELL 87
               +L+++LL
Sbjct: 72 EGLHNVLVIDLL 83

>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]} Length = 345

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase Erk2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 48.7 bits (115), Expect = 2e-08
 Identities = 16/87 (18%), Positives = 34/87 (39%), Gaps = 7/87 (8%)

Query: 16  GKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFE 75
           G Y  V    D  N  + A K +      T  +   L E+ +L   R +  I+ ++ +  
Sbjct: 19  GAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQ-RTLREIKILLRFR-HENIIGINDIIR 76

Query: 76  SSH-----DMILLLELLTSAVDSKIRE 97
           +       D+ L+  L+ + +   ++ 
Sbjct: 77  APTIEQMKDVYLVTHLMGADLYKLLKT 103

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 337

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 46.7 bits (110), Expect = 1e-07
 Identities = 19/71 (26%), Positives = 32/71 (45%), Gaps = 2/71 (2%)

Query: 16 GKYATVRRCRDRKNGTQYAAKFLRKKR-RSTDLKAEILHEVAVLEACRCNSRIVQLHQVF 74
          G +  V   R++  G  YA K LRK+   + D  A  + E  VL+  R    +  L   F
Sbjct: 16 GTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPF-LTALKYAF 74

Query: 75 ESSHDMILLLE 85
          ++   +  ++E
Sbjct: 75 QTHDRLCFVME 85

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]} Length = 287

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 46.3 bits (109), Expect = 1e-07
 Identities = 17/72 (23%), Positives = 29/72 (40%), Gaps = 4/72 (5%)

Query: 16 GKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFE 75
          G+Y  V     +K     A K L++     +   E L E AV++  +    +VQL  V  
Sbjct: 28 GQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE---EFLKEAAVMKEIKH-PNLVQLLGVCT 83

Query: 76 SSHDMILLLELL 87
                ++ E +
Sbjct: 84 REPPFYIITEFM 95

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 309

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 45.6 bits (107), Expect = 2e-07
 Identities = 18/73 (24%), Positives = 30/73 (41%), Gaps = 1/73 (1%)

Query: 16 GKYATVRRCRDRKNGTQYAAKFLR-KKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVF 74
          G +  V + R +K+G +  A   R K+  S D   +   E+ VL     +  I+ L    
Sbjct: 21 GNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGAC 80

Query: 75 ESSHDMILLLELL 87
          E    + L +E  
Sbjct: 81 EHRGYLYLAIEYA 93

>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Ribosomal protein S6 kinase alpha 5, Msk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 45.6 bits (107), Expect = 3e-07
 Identities = 22/76 (28%), Positives = 30/76 (39%), Gaps = 5/76 (6%)

Query: 16  GKYATVRRCRD---RKNGTQYAAKFLRKKRRSTDLKA--EILHEVAVLEACRCNSRIVQL 70
           G Y  V   R       G  YA K L+K       K       E  VLE  R +  +V L
Sbjct: 35  GAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTL 94

Query: 71  HQVFESSHDMILLLEL 86
           H  F++   + L+L+ 
Sbjct: 95  HYAFQTETKLHLILDY 110

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]} Length = 335

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 45.1 bits (106), Expect = 4e-07
 Identities = 13/76 (17%), Positives = 32/76 (42%), Gaps = 11/76 (14%)

Query: 16 GKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFE 75
          G    V +  +++   ++A K L+   +          EV +         IV++  V+E
Sbjct: 23 GINGKVLQIFNKRTQEKFALKMLQDCPK-------ARREVELHWRASQCPHIVRIVDVYE 75

Query: 76 SSHD----MILLLELL 87
          + +     +++++E L
Sbjct: 76 NLYAGRKCLLIVMECL 91

>d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 362

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Sky1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 44.6 bits (104), Expect = 5e-07
 Identities = 15/78 (19%), Positives = 28/78 (35%), Gaps = 7/78 (8%)

Query: 16  GKYATVRRCRDRKNGTQYAAKFLRKKRRSTD-------LKAEILHEVAVLEACRCNSRIV 68
           G ++TV   +D  N T  A K +R  +  T+       L   +       E     + I+
Sbjct: 24  GHFSTVWLAKDMVNNTHVAMKIVRGDKVYTEAAEDEIKLLQRVNDADNTKEDSMGANHIL 83

Query: 69  QLHQVFESSHDMILLLEL 86
           +L   F       + + +
Sbjct: 84  KLLDHFNHKGPNGVHVVM 101

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 311

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 44.4 bits (104), Expect = 5e-07
 Identities = 13/77 (16%), Positives = 24/77 (31%), Gaps = 6/77 (7%)

Query: 16  GKYATVRRCRDRK-----NGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQL 70
           G +  V                 A K L+     T+ +  ++ E+ VL     +  IV L
Sbjct: 34  GAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTERE-ALMSELKVLSYLGNHMNIVNL 92

Query: 71  HQVFESSHDMILLLELL 87
                     +++ E  
Sbjct: 93  LGACTIGGPTLVITEYC 109

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 325

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 44.4 bits (104), Expect = 6e-07
 Identities = 15/77 (19%), Positives = 29/77 (37%), Gaps = 6/77 (7%)

Query: 16  GKYATVRRCRDRKNG-----TQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQL 70
           G +  V               Q A K L++K  S++ +  ++ E+ ++     +  IV L
Sbjct: 48  GAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSERE-ALMSELKMMTQLGSHENIVNL 106

Query: 71  HQVFESSHDMILLLELL 87
                 S  + L+ E  
Sbjct: 107 LGACTLSGPIYLIFEYC 123

>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]} Length = 305

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK6
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 43.3 bits (101), Expect = 2e-06
 Identities = 20/67 (29%), Positives = 29/67 (43%), Gaps = 3/67 (4%)

Query: 16 GKYATVRRCRDRKNGTQYAA-KFLRKKRRSTDLKAEILHEVAVLEACRCNSR--IVQLHQ 72
          G Y  V + RD KNG ++ A K +R +     +    + EVAVL          +V+L  
Sbjct: 18 GAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFD 77

Query: 73 VFESSHD 79
          V   S  
Sbjct: 78 VCTVSRT 84

>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Glycogen synthase kinase-3 beta (Gsk3b)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 42.5 bits (99), Expect = 3e-06
 Identities = 17/88 (19%), Positives = 34/88 (38%), Gaps = 13/88 (14%)

Query: 16  GKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFE 75
           G +  V + +   +G   A K + + +R          E+ ++     +  IV+L   F 
Sbjct: 31  GSFGVVYQAKLCDSGELVAIKKVLQDKR------FKNRELQIMRKLD-HCNIVRLRYFFY 83

Query: 76  SSHD------MILLLELLTSAVDSKIRE 97
           SS +      + L+L+ +   V    R 
Sbjct: 84  SSGEKKDEVYLNLVLDYVPETVYRVARH 111

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 42.4 bits (99), Expect = 3e-06
 Identities = 15/72 (20%), Positives = 31/72 (43%), Gaps = 5/72 (6%)

Query: 16 GKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFE 75
          G++  V       N  + A K +R+   S +   + + E  V+     + ++VQL+ V  
Sbjct: 16 GQFGLVHLGYW-LNKDKVAIKTIREGAMSEE---DFIEEAEVMMKLS-HPKLVQLYGVCL 70

Query: 76 SSHDMILLLELL 87
              + L+ E +
Sbjct: 71 EQAPICLVFEFM 82

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 42.1 bits (98), Expect = 5e-06
 Identities = 15/66 (22%), Positives = 31/66 (46%), Gaps = 2/66 (3%)

Query: 16  GKYATVRRCRDRKNGTQYAAKFLRKKR-RSTDLKAEILHEVAVLEACRCNSRIVQLHQVF 74
           G +  V   + +++G  YA K L K++          L+E  +L+A      +V+L   F
Sbjct: 52  GSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF-LVKLEFSF 110

Query: 75  ESSHDM 80
           + + ++
Sbjct: 111 KDNSNL 116

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 276

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.4 bits (89), Expect = 7e-05
 Identities = 12/72 (16%), Positives = 26/72 (36%), Gaps = 5/72 (6%)

Query: 16 GKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFE 75
          G + TV + +        A K L     +        +EV VL   R +  I+     + 
Sbjct: 19 GSFGTVYKGKWHG---DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTR-HVNILLFM-GYS 73

Query: 76 SSHDMILLLELL 87
          ++  + ++ +  
Sbjct: 74 TAPQLAIVTQWC 85

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]} Length = 262

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.1 bits (88), Expect = 1e-04
 Identities = 17/73 (23%), Positives = 30/73 (41%), Gaps = 8/73 (10%)

Query: 16 GKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVF- 74
          G++  V     R  G + A K ++            L E +V+   R +S +VQL  V  
Sbjct: 18 GEFGDVMLGDYR--GNKVAVKCIKNDAT----AQAFLAEASVMTQLR-HSNLVQLLGVIV 70

Query: 75 ESSHDMILLLELL 87
          E    + ++ E +
Sbjct: 71 EEKGGLYIVTEYM 83

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	126
d2j4za1	263	Aurora-related kinase 1 (aurora-2) {Human (Homo sa	99.97
d1jksa_	293	Death-associated protein kinase, Dap {Human (Homo	99.97
d1nvra_	271	Cell cycle checkpoint kinase chk1 {Human (Homo sap	99.97
d1a06a_	307	Calmodulin-dependent protein kinase {Rat (Rattus n	99.96
d1t4ha_	270	Protein kinase wnk1 {Human (Homo sapiens) [TaxId:	99.96
d1phka_	277	gamma-subunit of glycogen phosphorylase kinase (Ph	99.96
d1o6la_	337	Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9	99.96
d1uu3a_	288	3-phosphoinositide dependent protein kinase-1 Pdk1	99.96
d1tkia_	321	Titin, kinase domain {Human (Homo sapiens) [TaxId:	99.96
d1u5ra_	309	Serine/threonine protein kinase TAO2 {Rat (Rattus	99.96
d2jfla1	288	STE20-like serine/threonine-protein kinase, SLK {H	99.96
d1yhwa1	293	pak1 {Human (Homo sapiens) [TaxId: 9606]}	99.96
d1s9ja_	322	Dual specificity mitogen-activated protein kinase	99.96
d1koaa2	350	Twitchin, kinase domain {Caenorhabditis elegans, p	99.96
d2java1	269	Serine/threonine-protein kinase Nek2 {Human (Homo	99.96
d1xjda_	320	Protein kinase C, theta type {Human (Homo sapiens)	99.96
d1koba_	352	Twitchin, kinase domain {California sea hare (Aply	99.95
d1fota_	316	cAMP-dependent PK, catalytic subunit {Baker's yeas	99.95
d1o6ya_	277	Mycobacterial protein kinase PknB, catalytic domai	99.95
d1opja_	287	Abelsone tyrosine kinase (abl) {Mouse (Mus musculu	99.95
d1xbba_	277	Tyrosine-protein kinase SYK {Human (Homo sapiens)	99.95
d1gz8a_	298	Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [T	99.95
d1omwa3	364	G-protein coupled receptor kinase 2 {Cow (Bos taur	99.95
d1rdqe_	350	cAMP-dependent PK, catalytic subunit {Mouse (Mus m	99.95
d2ozaa1	335	MAP kinase activated protein kinase 2, mapkap2 {Hu	99.94
d1jpaa_	299	ephb2 receptor tyrosine kinase {Mouse (Mus musculu	99.94
d1k2pa_	258	Bruton's tyrosine kinase (Btk) {Human (Homo sapien	99.94
d1ua2a_	299	Cell division protein kinase 7, CDK7 {Human (Homo	99.94
d1unla_	292	Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [T	99.94
d1sm2a_	263	Tyrosine-protein kinase Itk/Tsk {Human (Homo sapie	99.94
d1ob3a_	286	Cyclin-dependent PK, CDK2 {(Plasmodium falciparum)	99.94
d1u59a_	285	Tyrosine-protein kinase ZAP-70 {Human (Homo sapien	99.94
d1uwha_	276	B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}	99.93
d1xwsa_	273	Proto-oncogene serine/threonine-protein kinase Pim	99.93
d1vzoa_	322	Ribosomal protein S6 kinase alpha 5, Msk1 {Human (	99.93
d2b1pa1	355	c-jun N-terminal kinase (jnk3s) {Human (Homo sapie	99.93
d1cm8a_	346	MAP kinase p38-gamma {Human (Homo sapiens) [TaxId:	99.93
d1fvra_	309	Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}	99.93
d3bqca1	328	Protein kinase CK2, alpha subunit {Rattus norvegic	99.93
d1rjba_	325	Fl cytokine receptor {Human (Homo sapiens) [TaxId:	99.92
d3blha1	318	Cell division protein kinase 9, CDK9 {Human (Homo	99.92
d1qpca_	272	Lymphocyte kinase (lck) {Human (Homo sapiens) [Tax	99.92
d2gfsa1	348	MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]	99.92
d1mqba_	283	epha2 receptor tyrosine kinase {Human (Homo sapien	99.92
d1fmka3	285	c-src tyrosine kinase {Human (Homo sapiens) [TaxId	99.92
d1t46a_	311	c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]	99.92
d1q5ka_	350	Glycogen synthase kinase-3 beta (Gsk3b) {Human (Ho	99.92
d1byga_	262	Carboxyl-terminal src kinase (csk) {Human (Homo sa	99.92
d1mp8a_	273	Focal adhesion kinase 1 (fak) {Human (Homo sapiens	99.91
d1fgka_	299	Fibroblast growth factor receptor 1 {Human (Homo s	99.91
d1pmea_	345	MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606	99.91
d1lufa_	301	Musk tyrosine kinase {Rat (Rattus norvegicus) [Tax	99.9
d1r0pa_	311	Hepatocyte growth factor receptor, c-MET {Human (H	99.9
d1xkka_	317	EGF receptor tyrosine kinase, Erbb-1 {Human (Homo	99.9
d1blxa_	305	Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [T	99.89
d1u46a_	273	Activated CDC42 kinase 1, ACK1 {Human (Homo sapien	99.89
d1ywna1	299	Vascular endothelial growth factor receptor 2 (kdr	99.89
d1ckia_	299	Casein kinase-1, CK1 {Rat (Rattus norvegicus) [Tax	99.89
d1p4oa_	308	Insulin-like growth factor 1 receptor {Human (Homo	99.89
d1csna_	293	Casein kinase-1, CK1 {Fission yeast (Schizosacchar	99.88
d1vjya_	303	Type I TGF-beta receptor R4 {Human (Homo sapiens)	99.87
d1q8ya_	362	Sky1p {Baker's yeast (Saccharomyces cerevisiae) [T	99.71
d1zara2	191	Rio2 serine protein kinase C-terminal domain {Arch	99.61
d1j7la_	263	Type IIIa 3',5"-aminoglycoside phosphotransferase	97.78
d2pula1	392	Methylthioribose kinase MtnK {Bacillus subtilis [T	97.1
d1nd4a_	255	Aminoglycoside 3'-phosphotransferase IIa (Kanamyci	96.69

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=1.7e-30  Score=163.72  Aligned_cols=124  Identities=15%  Similarity=0.164  Sum_probs=112.1

Q ss_pred             cccccccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCC-chhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeE
Q psy8006           2 NNIKNIISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRS-TDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDM   80 (126)
Q Consensus         2 ~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~-~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~   80 (126)
                      +.+++|...+.||+|+||.||+|.+..++..+|+|.+.+.... ......+.+|+.+++.++| |||+++++++.+++..
T Consensus         3 ~~l~dy~i~~~iG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~h-pnIv~~~~~~~~~~~~   81 (263)
T d2j4za1           3 WALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH-PNILRLYGYFHDATRV   81 (263)
T ss_dssp             CCGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCC-TTBCCEEEEEECSSEE
T ss_pred             cchhHeEEEEEEecCCCcEEEEEEECCCCcEEEEEEEchHHccChHHHHHHHHHHHHHHhcCC-CCCCeEEEEEEECCEE
Confidence            4678899999999999999999999999999999999865432 2234568999999999998 9999999999999999


Q ss_pred             EEEEeccCcccHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          81 ILLLELLTSAVDSKIRESFGSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        81 ~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      |+||||+++|+|.+++.....+++..++.++.|++.|++|||+.++
T Consensus        82 ~ivmEy~~~g~L~~~l~~~~~l~e~~~~~i~~qi~~al~~lH~~~i  127 (263)
T d2j4za1          82 YLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRV  127 (263)
T ss_dssp             EEEEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred             EEEEeecCCCcHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence            9999999999999999888889999999999999999999999875

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=9.6e-30  Score=162.48  Aligned_cols=123  Identities=27%  Similarity=0.466  Sum_probs=110.2

Q ss_pred             cccc-ccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCc----hhHHHHHHHHHHHHHhcCCCCceeeeeeeEeC
Q psy8006           3 NIKN-IISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRST----DLKAEILHEVAVLEACRCNSRIVQLHQVFESS   77 (126)
Q Consensus         3 ~~~~-~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~----~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~   77 (126)
                      |+++ |...+.||+|+||.||+|.+..+|..||+|++.+.....    ...+.+.+|+.++++++| |||+++++++.++
T Consensus         7 ~i~d~Y~~~~~lG~G~fg~Vy~~~~~~~~~~~AvK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~H-pnIv~~~~~~~~~   85 (293)
T d1jksa_           7 NVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQH-PNVITLHEVYENK   85 (293)
T ss_dssp             CGGGTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCC-TTBCCEEEEEECS
T ss_pred             CcccCEEEeEEEecCCCeEEEEEEECCCCCEEEEEEEEhhhcchhhhhHHHHHHHHHHHHHHhCCC-CCCCcEEEEEEEC
Confidence            4544 778899999999999999999999999999998765422    234569999999999998 9999999999999


Q ss_pred             CeEEEEEeccCcccHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          78 HDMILLLELLTSAVDSKIRESFGSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        78 ~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      +..|+||||+++|+|.+++..++.+++..++.++.|++.|++|||+.++
T Consensus        86 ~~~~iv~E~~~gg~L~~~i~~~~~l~~~~~~~~~~qi~~al~yLH~~~i  134 (293)
T d1jksa_          86 TDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQI  134 (293)
T ss_dssp             SEEEEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred             CEEEEEEEcCCCccccchhccccccchhHHHHHHHHHHHHHHhhhhcce
Confidence            9999999999999999999888889999999999999999999998764

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=2.8e-30  Score=163.31  Aligned_cols=121  Identities=16%  Similarity=0.098  Sum_probs=106.7

Q ss_pred             cccccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeEEEE
Q psy8006           4 IKNIISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILL   83 (126)
Q Consensus         4 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~~lv   83 (126)
                      +++|...+.||+|+||.||+|.+..++..+|+|.++..... ...+.+.+|+.++++++| |||+++++++.+++..|+|
T Consensus         4 ~~dy~~~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~-~~~~~~~~Ei~~l~~l~H-pnIv~~~~~~~~~~~~~iv   81 (271)
T d1nvra_           4 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAV-DCPENIKKEICINKMLNH-ENVVKFYGHRREGNIQYLF   81 (271)
T ss_dssp             TTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC--------CHHHHHHHHHTCCC-TTBCCEEEEEEETTEEEEE
T ss_pred             CcceEEEEEEecCcCeEEEEEEECCCCCEEEEEEEehhhcc-hHHHHHHHHHHHHHhCCC-CCEeeEeeeeccCceeEEE
Confidence            45788889999999999999999999999999999865432 223458999999999998 9999999999999999999


Q ss_pred             EeccCcccHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          84 LELLTSAVDSKIRESFGSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        84 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      |||+++|+|.+++..+..+++..++.++.|+++|++|||+.++
T Consensus        82 mEy~~gg~L~~~l~~~~~l~e~~~~~i~~qi~~al~ylH~~~I  124 (271)
T d1nvra_          82 LEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGI  124 (271)
T ss_dssp             EECCTTEEGGGGSBTTTBCCHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred             EeccCCCcHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHcCC
Confidence            9999999999999877889999999999999999999998764

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.96  E-value=1.8e-29  Score=162.05  Aligned_cols=118  Identities=18%  Similarity=0.211  Sum_probs=102.9

Q ss_pred             ccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeEEEEEec
Q psy8006           7 IISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLLEL   86 (126)
Q Consensus         7 ~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~~lv~e~   86 (126)
                      |...+.||+|+||.||+|.+..++..||+|.+....... ....+.+|+.++..++| |||+++++++.+++.+|+||||
T Consensus        11 Y~~~~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~-~~~~~~~Ei~il~~l~H-pnIv~l~~~~~~~~~~~lvmE~   88 (307)
T d1a06a_          11 YDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEG-KEGSMENEIAVLHKIKH-PNIVALDDIYESGGHLYLIMQL   88 (307)
T ss_dssp             EEEEEESBSGGGGGEEEEEETTTCCEEEEEEEEC-----------CHHHHHHHTCCC-TTBCCEEEEEECSSEEEEEECC
T ss_pred             eEEEEEEeeccCeEEEEEEECCCCCEEEEEEEchHHhhh-HHHHHHHHHHHHHhCCC-CCCCcEEEEEEECCEEEEEEec
Confidence            677899999999999999999999999999998765432 23458899999999998 9999999999999999999999


Q ss_pred             cCcccHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          87 LTSAVDSKIRESFGSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        87 ~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      +++++|.+++..++.+++..+..++.|++.|++|||+.++
T Consensus        89 ~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~al~ylH~~~i  128 (307)
T d1a06a_          89 VSGGELFDRIVEKGFYTERDASRLIFQVLDAVKYLHDLGI  128 (307)
T ss_dssp             CCSCBHHHHHHTCSCCCHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred             cCCCcHHHhhhcccCCCHHHHHHHHHHHHHHHHhhhhcee
Confidence            9999999999888889999999999999999999999874

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=7e-29  Score=156.82  Aligned_cols=118  Identities=17%  Similarity=0.175  Sum_probs=105.6

Q ss_pred             ccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEe----CCeEEE
Q psy8006           7 IISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFES----SHDMIL   82 (126)
Q Consensus         7 ~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~----~~~~~l   82 (126)
                      +.-.+.||+|+||.||+|.+..++..+|+|.+..........+.+.+|+.++++++| |||+++++++..    ...+|+
T Consensus        11 ~~~~~~iG~G~fg~Vy~~~~~~~~~~va~K~i~~~~~~~~~~~~~~~E~~il~~l~H-pnIv~~~~~~~~~~~~~~~~~i   89 (270)
T d1t4ha_          11 LKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQH-PNIVRFYDSWESTVKGKKCIVL   89 (270)
T ss_dssp             EEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCC-TTBCCEEEEEEEESSSCEEEEE
T ss_pred             EEeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCC-CCeeeEEEEEeeccccCCEEEE
Confidence            445678999999999999999999999999998876655556679999999999998 999999999864    346899


Q ss_pred             EEeccCcccHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhhccC
Q psy8006          83 LLELLTSAVDSKIRESFGSKSESGVQNCLEPSISVFSSLSKFE  125 (126)
Q Consensus        83 v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~l~~~~  125 (126)
                      ||||+++|+|.+++.+...+++..++.++.|++.|++|||+.+
T Consensus        90 vmE~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~gl~yLH~~~  132 (270)
T d1t4ha_          90 VTELMTSGTLKTYLKRFKVMKIKVLRSWCRQILKGLQFLHTRT  132 (270)
T ss_dssp             EEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTSS
T ss_pred             EEeCCCCCcHHHHHhccccccHHHHHHHHHHHHHHHHHHHHCC
Confidence            9999999999999988888999999999999999999999876

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

Probab=99.96  E-value=7.3e-29  Score=157.24  Aligned_cols=122  Identities=21%  Similarity=0.328  Sum_probs=109.1

Q ss_pred             ccccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCc-------hhHHHHHHHHHHHHHhcCCCCceeeeeeeEeC
Q psy8006           5 KNIISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRST-------DLKAEILHEVAVLEACRCNSRIVQLHQVFESS   77 (126)
Q Consensus         5 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~-------~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~   77 (126)
                      ++|...+.||+|+||+||+|.+..+++.+|+|+++......       .....+.+|+.++++++.||||+++++++.++
T Consensus         3 ~~y~~~~~iG~G~~g~V~~~~~~~~~~~~AvK~i~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~   82 (277)
T d1phka_           3 ENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYETN   82 (277)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEECS
T ss_pred             ccCEEceEEecCcCeEEEEEEECCCCCEEEEEEEecccccchhHHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEeecccC
Confidence            56888999999999999999999999999999998765432       12335889999999998449999999999999


Q ss_pred             CeEEEEEeccCcccHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          78 HDMILLLELLTSAVDSKIRESFGSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        78 ~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      +..|+||||+++|+|.++++.++.+++.+++.++.|++.|++|||+.++
T Consensus        83 ~~~~ivmE~~~~g~L~~~l~~~~~l~e~~~~~~~~qi~~al~~lH~~~i  131 (277)
T d1phka_          83 TFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVICALHKLNI  131 (277)
T ss_dssp             SEEEEEEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred             cceEEEEEcCCCchHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCC
Confidence            9999999999999999999888899999999999999999999998764

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=3.7e-29  Score=162.30  Aligned_cols=123  Identities=18%  Similarity=0.183  Sum_probs=111.8

Q ss_pred             ccccccceeeccCccceeEEEEEEccCCcEEEEEEeecCCC-CchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeEE
Q psy8006           3 NIKNIISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRR-STDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMI   81 (126)
Q Consensus         3 ~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~-~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~~   81 (126)
                      ++++|...+.||+|+||.||+|.+..++..||+|++++... .......+.+|+.+++.++| |||+++++.+.+++.+|
T Consensus         3 ~l~dy~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~h-p~Iv~l~~~~~~~~~~~   81 (337)
T d1o6la_           3 TMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRH-PFLTALKYAFQTHDRLC   81 (337)
T ss_dssp             CGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCC-TTBCCEEEEEECSSEEE
T ss_pred             chHhcEEEEEEecCcCeEEEEEEECCCCCEEEEEEEchhhccCHHHHHHHHHHHHHHHhCCC-CCEEEEEeeeccccccc
Confidence            46789999999999999999999999999999999986543 22234568899999999998 99999999999999999


Q ss_pred             EEEeccCcccHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          82 LLLELLTSAVDSKIRESFGSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        82 lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      +||||+++|+|.+++...+.+++..++.++.|++.|++|||+.++
T Consensus        82 iv~ey~~gg~L~~~~~~~~~~~e~~~~~~~~qil~al~ylH~~~i  126 (337)
T d1o6la_          82 FVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDV  126 (337)
T ss_dssp             EEEECCTTCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred             cceeccCCCchhhhhhcccCCcHHHHHHHHHHHhhhhhhhhhcCc
Confidence            999999999999999988899999999999999999999999875

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=2.4e-29  Score=160.26  Aligned_cols=122  Identities=18%  Similarity=0.163  Sum_probs=109.8

Q ss_pred             cccccceeeccCccceeEEEEEEccCCcEEEEEEeecCCC-CchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeEEE
Q psy8006           4 IKNIISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRR-STDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMIL   82 (126)
Q Consensus         4 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~-~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~~l   82 (126)
                      -++|...+.||+|+||.||+|.+..++..||+|++..... .......+.+|+.++++++| |||+++++++.+++..|+
T Consensus         7 p~dy~i~~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~E~~il~~l~H-pnIv~l~~~~~~~~~~~i   85 (288)
T d1uu3a_           7 PEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH-PFFVKLYFTFQDDEKLYF   85 (288)
T ss_dssp             GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCS-TTBCCEEEEEECSSEEEE
T ss_pred             CCCCEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehHHccCHHHHHHHHHHHHHHHHcCC-CCeeEEEEEEEECCEEEE
Confidence            3578889999999999999999999999999999986543 22234568999999999998 999999999999999999


Q ss_pred             EEeccCcccHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          83 LLELLTSAVDSKIRESFGSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        83 v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      ||||+++|+|.+++...+.+++..++.++.|++.|++|||+.++
T Consensus        86 vmEy~~gg~L~~~~~~~~~l~e~~~~~~~~qi~~al~ylH~~~i  129 (288)
T d1uu3a_          86 GLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGI  129 (288)
T ss_dssp             EECCCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred             EEEccCCCCHHHhhhccCCCCHHHHHHHHHHHHHHHHhhccccE
Confidence            99999999999999888899999999999999999999998764

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=1e-28  Score=159.37  Aligned_cols=118  Identities=18%  Similarity=0.325  Sum_probs=106.1

Q ss_pred             ccccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeEEEEE
Q psy8006           5 KNIISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLL   84 (126)
Q Consensus         5 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~~lv~   84 (126)
                      +.|...+.||+|+||.||+|.+..++..||+|.++...   .....+.+|+.++..++| |||+++++.+.+++.+|+||
T Consensus         5 ~rY~i~~~lG~G~fg~Vy~~~~~~~~~~~AiK~i~~~~---~~~~~~~~Ei~il~~l~H-pnIv~~~~~~~~~~~~~lvm   80 (321)
T d1tkia_           5 EKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKG---TDQVLVKKEISILNIARH-RNILHLHESFESMEELVMIF   80 (321)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCT---HHHHHHHHHHHHHHHSCC-TTBCCEEEEEEETTEEEEEE
T ss_pred             cceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEcCCc---ccHHHHHHHHHHHHhCCC-CCCCeEEEEEEECCEEEEEE
Confidence            45778899999999999999999999999999997653   223458899999999998 99999999999999999999


Q ss_pred             eccCcccHHHHHHhcC-CCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          85 ELLTSAVDSKIRESFG-SKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        85 e~~~~~~L~~~~~~~~-~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      ||+++++|.+++..++ .+++.+++.++.|++.|++|||+.++
T Consensus        81 E~~~gg~L~~~i~~~~~~l~e~~~~~i~~qi~~al~yLH~~~i  123 (321)
T d1tkia_          81 EFISGLDIFERINTSAFELNEREIVSYVHQVCEALQFLHSHNI  123 (321)
T ss_dssp             CCCCCCBHHHHHTSSSCCCCHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred             ecCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHcCC
Confidence            9999999999997654 79999999999999999999999864

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.96  E-value=1.4e-28  Score=158.02  Aligned_cols=119  Identities=15%  Similarity=0.177  Sum_probs=107.1

Q ss_pred             ccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCc-hhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeEEEEEe
Q psy8006           7 IISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRST-DLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLLE   85 (126)
Q Consensus         7 ~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~-~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~~lv~e   85 (126)
                      |...+.||+|+||.||+|.+..++..||+|.+....... ...+.+.+|+.++++++| |||+++++++.+++..|+|||
T Consensus        17 y~~l~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~Ei~il~~l~H-pnIv~~~~~~~~~~~~~iv~E   95 (309)
T d1u5ra_          17 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRH-PNTIQYRGCYLREHTAWLVME   95 (309)
T ss_dssp             EEEEEEEEECSSSEEEEEEETTTTEEEEEEEEECCSSCHHHHHHHHHHHHHHHTTCCC-TTBCCEEEEEEETTEEEEEEE
T ss_pred             cEeeEEEecCCCeEEEEEEECCCCcEEEEEEEchhhccCHHHHHHHHHHHHHHHHCCC-CCEeeEEEEEEECCEEEEEEE
Confidence            667788999999999999999999999999998765433 334568999999999998 999999999999999999999


Q ss_pred             ccCcccHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          86 LLTSAVDSKIRESFGSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        86 ~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      |+++|++..++..+..+++.+++.++.|++.||.|||+.++
T Consensus        96 ~~~~g~l~~~~~~~~~l~e~~~~~i~~qi~~aL~yLH~~~i  136 (309)
T d1u5ra_          96 YCLGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHNM  136 (309)
T ss_dssp             CCSEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred             ecCCCchHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCE
Confidence            99999888777777889999999999999999999999875

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=9.4e-29  Score=157.51  Aligned_cols=121  Identities=16%  Similarity=0.208  Sum_probs=106.5

Q ss_pred             ccccccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeEEE
Q psy8006           3 NIKNIISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMIL   82 (126)
Q Consensus         3 ~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~~l   82 (126)
                      +-+.|...+.||+|+||.||+|.+..++..+|+|.++....  ...+.+.+|+.++++++| |||+++++++.+++..|+
T Consensus        10 p~d~Y~i~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~--~~~~~~~~E~~il~~l~H-pnIv~l~~~~~~~~~~~l   86 (288)
T d2jfla1          10 PEDFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSE--EELEDYMVEIDILASCDH-PNIVKLLDAFYYENNLWI   86 (288)
T ss_dssp             GGGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECSSS--GGGGGTHHHHHHHHHCCC-TTBCCEEEEEEETTEEEE
T ss_pred             cccCeEEeEEEeeCCCcEEEEEEECCCCeEEEEEEECcCCH--HHHHHHHHHHHHHHhCCC-CCCCeEEEEEeeCCeEEE
Confidence            33456778889999999999999999999999999986532  233468899999999998 999999999999999999


Q ss_pred             EEeccCcccHHHHHHh-cCCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          83 LLELLTSAVDSKIRES-FGSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        83 v~e~~~~~~L~~~~~~-~~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      ||||+++|+|.+++.+ ...+++..++.++.|++.|+.|||+.++
T Consensus        87 vmEy~~~g~L~~~~~~~~~~l~e~~~~~i~~qi~~gL~ylH~~~i  131 (288)
T d2jfla1          87 LIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDNKI  131 (288)
T ss_dssp             EEECCTTEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred             EEecCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCE
Confidence            9999999999988764 4579999999999999999999998764

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=2.6e-28  Score=155.71  Aligned_cols=117  Identities=14%  Similarity=0.185  Sum_probs=105.6

Q ss_pred             cccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeEEEEEe
Q psy8006           6 NIISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLLE   85 (126)
Q Consensus         6 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~~lv~e   85 (126)
                      .|...+.||+|+||.||+|.+..+|..||+|.+......  ..+.+.+|+.++++++| |||+++++++..++..|+|||
T Consensus        21 ~Y~~~~~iG~G~fg~Vy~a~~~~~~~~vAvK~~~~~~~~--~~~~~~~E~~il~~l~H-pnIv~~~~~~~~~~~~~ivmE   97 (293)
T d1yhwa1          21 KYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQP--KKELIINEILVMRENKN-PNIVNYLDSYLVGDELWVVME   97 (293)
T ss_dssp             TBCSCEECCCSSSCEEEEEEBTTTCCEEEEEEEEGGGCS--CHHHHHHHHHHHHHCCC-TTBCCEEEEEEETTEEEEEEE
T ss_pred             ccEEEEEEecCcCcEEEEEEECCCCCEEEEEEEecccCh--HHHHHHHHHHHHHhCCC-CCEeeEeEEEEECCEEEEEEE
Confidence            477788999999999999999999999999999865432  24468999999999999 999999999999999999999


Q ss_pred             ccCcccHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          86 LLTSAVDSKIRESFGSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        86 ~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      |+++|+|.+++.. ..+++..++.++.|++.|++|||+.++
T Consensus        98 y~~gg~L~~~~~~-~~l~~~~~~~i~~qi~~aL~yLH~~~i  137 (293)
T d1yhwa1          98 YLAGGSLTDVVTE-TCMDEGQIAAVCRECLQALEFLHSNQV  137 (293)
T ss_dssp             CCTTCBHHHHHHH-SCCCHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred             ecCCCcHHHHhhc-cCCCHHHHHHHHHHHHHHHHHHHHCCC
Confidence            9999999988775 569999999999999999999999864

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=1.2e-28  Score=159.19  Aligned_cols=120  Identities=16%  Similarity=0.218  Sum_probs=108.3

Q ss_pred             ccccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeEEEEE
Q psy8006           5 KNIISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLL   84 (126)
Q Consensus         5 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~~lv~   84 (126)
                      ++|...+.||+|+||.||+|.+..+|..||+|.++.... ......+.+|+.+++.++| |||+++++++.+++.+|+||
T Consensus         6 d~y~~~~~iG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~-~~~~~~~~~Ei~il~~l~H-pnIv~l~~~~~~~~~~~iVm   83 (322)
T d1s9ja_           6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIK-PAIRNQIIRELQVLHECNS-PYIVGFYGAFYSDGEISICM   83 (322)
T ss_dssp             GGEEEEEEEECCSSCCEEEEEETTTTEEEEEEEEECCCC-TTHHHHHHHHGGGGGGCCC-TTBCCEEEEEECSSEEEEEE
T ss_pred             cCCEEEEEEecCCCeEEEEEEECCCCcEEEEEEEChhhC-HHHHHHHHHHHHHHHhCCC-CCCCcEEEEEEECCEEEEEE
Confidence            567888999999999999999999999999999986532 3345578999999999998 99999999999999999999


Q ss_pred             eccCcccHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhhcc-CC
Q psy8006          85 ELLTSAVDSKIRESFGSKSESGVQNCLEPSISVFSSLSKF-ET  126 (126)
Q Consensus        85 e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~l~~~-~~  126 (126)
                      ||+++|+|.+++.+++.+++..++.++.|++.|+.|||.. ++
T Consensus        84 Ey~~gg~L~~~l~~~~~l~~~~~~~~~~qil~aL~yLH~~~~I  126 (322)
T d1s9ja_          84 EHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKI  126 (322)
T ss_dssp             ECCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHHHCC
T ss_pred             EcCCCCcHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHhCCE
Confidence            9999999999998888899999999999999999999953 43

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

Probab=99.96  E-value=2.2e-28  Score=159.40  Aligned_cols=120  Identities=18%  Similarity=0.297  Sum_probs=106.8

Q ss_pred             cccccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeEEEE
Q psy8006           4 IKNIISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILL   83 (126)
Q Consensus         4 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~~lv   83 (126)
                      +++|...+.||+|+||.||+|.+..+|..||+|.+....  ....+.+.+|+.++.+++| |||+++++++..++.+|+|
T Consensus        25 l~~Y~i~~~lG~G~fg~Vy~~~~~~~g~~vAvK~i~~~~--~~~~~~~~~E~~il~~l~H-pnIv~~~~~~~~~~~~~iv  101 (350)
T d1koaa2          25 LDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPH--ESDKETVRKEIQTMSVLRH-PTLVNLHDAFEDDNEMVMI  101 (350)
T ss_dssp             GGTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECCCS--HHHHHHHHHHHHHHHHTCC-TTBCCEEEEEEETTEEEEE
T ss_pred             ccCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEcccc--hhhHHHHHHHHHHHHhCCC-CCCCcEEEEEEECCEEEEE
Confidence            346778899999999999999999999999999997653  2234568999999999998 9999999999999999999


Q ss_pred             EeccCcccHHHHHH-hcCCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          84 LELLTSAVDSKIRE-SFGSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        84 ~e~~~~~~L~~~~~-~~~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      |||+++|+|.+++. ..+.+++..++.++.|++.||+|||+.++
T Consensus       102 mE~~~gg~L~~~l~~~~~~l~e~~~~~i~~qi~~aL~ylH~~~i  145 (350)
T d1koaa2         102 YEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHENNY  145 (350)
T ss_dssp             ECCCCSCBHHHHHTCTTSCBCHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred             EEcCCCCCHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhcCC
Confidence            99999999988885 44679999999999999999999999764

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=3.2e-28  Score=153.75  Aligned_cols=121  Identities=12%  Similarity=0.109  Sum_probs=106.3

Q ss_pred             cccccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEe--CCeEE
Q psy8006           4 IKNIISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFES--SHDMI   81 (126)
Q Consensus         4 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~--~~~~~   81 (126)
                      .++|...+.||+|+||.||+|.+..+|+.||+|.+......+...+.+.+|+.++.+++| |||+++++.+.+  ++.+|
T Consensus         3 ~edy~~~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~H-pnIv~~~~~~~~~~~~~~~   81 (269)
T d2java1           3 AEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKH-PNIVRYYDRIIDRTNTTLY   81 (269)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCTTSCHHHHHHHHHHHHHTTSCCC-TTBCCEEEEEEC----CEE
T ss_pred             chhCEEeEEEecCCCeEEEEEEECCCCCEEEEEEEChhhCCHHHHHHHHHHHHHHHHCCC-CCEeeEEEEEEeCCCCEEE
Confidence            568888899999999999999999999999999998876665556679999999999998 999999998864  45689


Q ss_pred             EEEeccCcccHHHHHHh----cCCCCHHHHHHHHHHHHHHHHhhhccC
Q psy8006          82 LLLELLTSAVDSKIRES----FGSKSESGVQNCLEPSISVFSSLSKFE  125 (126)
Q Consensus        82 lv~e~~~~~~L~~~~~~----~~~~~~~~~~~~~~qi~~~l~~l~~~~  125 (126)
                      +||||+++|+|.+++..    +..+++..++.++.|++.|++|||+.+
T Consensus        82 ivmEy~~~g~L~~~i~~~~~~~~~l~e~~~~~i~~qi~~al~ylH~~~  129 (269)
T d2java1          82 IVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRS  129 (269)
T ss_dssp             EEEECCTTEEHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHHC
T ss_pred             EEEecCCCCcHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHhc
Confidence            99999999999988753    457999999999999999999999754

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=2.8e-28  Score=157.27  Aligned_cols=122  Identities=17%  Similarity=0.116  Sum_probs=106.9

Q ss_pred             cccccceeeccCccceeEEEEEEccCCcEEEEEEeecCCC-CchhHHHHHHHHHHHH-HhcCCCCceeeeeeeEeCCeEE
Q psy8006           4 IKNIISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRR-STDLKAEILHEVAVLE-ACRCNSRIVQLHQVFESSHDMI   81 (126)
Q Consensus         4 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~-~~~~~~~~~~e~~~l~-~~~~~~~iv~l~~~~~~~~~~~   81 (126)
                      +++|...+.||+|+||.||+|.+..+++.||+|++++... .......+.+|..++. .++| |||+++++++.+++..|
T Consensus         1 iddy~i~~~iG~G~fg~Vy~~~~~~t~~~vAvK~i~k~~~~~~~~~~~~~~e~~~l~~~~~h-p~Iv~~~~~~~~~~~~y   79 (320)
T d1xjda_           1 IEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEH-PFLTHMFCTFQTKENLF   79 (320)
T ss_dssp             CTTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTC-TTBCCEEEEEECSSEEE
T ss_pred             CCCeEEeeEEecCCCcEEEEEEECCCCCEEEEEEEchhhccChHHHHHHHHHHHHHHHhCCC-CcEEEEEEEEccCCcee
Confidence            5688889999999999999999999999999999986432 1223445677777766 5677 99999999999999999


Q ss_pred             EEEeccCcccHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          82 LLLELLTSAVDSKIRESFGSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        82 lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      +||||+++|+|.+++..+..+++..++.++.|++.|++|||+.++
T Consensus        80 ivmEy~~~g~L~~~i~~~~~~~e~~~~~~~~qi~~al~ylH~~~i  124 (320)
T d1xjda_          80 FVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQFLHSKGI  124 (320)
T ss_dssp             EEEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred             EEEeecCCCcHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhCCe
Confidence            999999999999999888889999999999999999999999874

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

Probab=99.95  E-value=5e-28  Score=157.79  Aligned_cols=119  Identities=19%  Similarity=0.293  Sum_probs=105.3

Q ss_pred             ccccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeEEEEE
Q psy8006           5 KNIISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLL   84 (126)
Q Consensus         5 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~~lv~   84 (126)
                      +.|...+.||+|+||.||+|.+..+|..||+|++.....  .....+.+|+.++++++| |||+++++++..++.+|+||
T Consensus        29 d~Y~i~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~--~~~~~~~~Ei~il~~l~H-pnIv~~~~~~~~~~~~~ivm  105 (352)
T d1koba_          29 DYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYP--LDKYTVKNEISIMNQLHH-PKLINLHDAFEDKYEMVLIL  105 (352)
T ss_dssp             GTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSH--HHHHHHHHHHHHHTTCCS-TTBCCEEEEEECSSEEEEEE
T ss_pred             cceEEEEEEecCCCeEEEEEEECCCCCEEEEEEECCcch--hHHHHHHHHHHHHHhCCC-CCCCcEEEEEEECCEEEEEE
Confidence            347778899999999999999999999999999986542  234468899999999998 99999999999999999999


Q ss_pred             eccCcccHHHHHHhc-CCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          85 ELLTSAVDSKIRESF-GSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        85 e~~~~~~L~~~~~~~-~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      ||+++|+|.+++... ..+++.+++.++.|++.||+|||+.++
T Consensus       106 E~~~gg~L~~~~~~~~~~l~e~~~~~i~~qi~~aL~ylH~~~i  148 (352)
T d1koba_         106 EFLSGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMHEHSI  148 (352)
T ss_dssp             ECCCCCBHHHHTTCTTCCBCHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred             EcCCCChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence            999999998877654 479999999999999999999998764

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.95  E-value=5.9e-28  Score=155.54  Aligned_cols=123  Identities=13%  Similarity=0.164  Sum_probs=111.0

Q ss_pred             ccccccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCC-chhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeEE
Q psy8006           3 NIKNIISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRS-TDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMI   81 (126)
Q Consensus         3 ~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~-~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~~   81 (126)
                      .+++|...+.||+|+||.||+|.++.+|..||+|+++..... ....+.+.+|+.++..++| |||+++++++..++.+|
T Consensus         2 sl~dy~i~~~lG~G~fg~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~E~~il~~l~H-pnIv~~~~~~~~~~~~~   80 (316)
T d1fota_           2 SLQDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTH-PFIIRMWGTFQDAQQIF   80 (316)
T ss_dssp             CGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCB-TTBCCEEEEEECSSEEE
T ss_pred             chhHeEEEEEEecCcCcEEEEEEECCCCCEEEEEEEchHHccCHHHHHHHHHHHHHHHhccC-cChhheeeeEeeCCeee
Confidence            467899999999999999999999999999999999865432 2234568899999999998 99999999999999999


Q ss_pred             EEEeccCcccHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          82 LLLELLTSAVDSKIRESFGSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        82 lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      +||||++++++..++..+..+++..++.++.|++.|++|||+.++
T Consensus        81 ivmE~~~gg~l~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i  125 (316)
T d1fota_          81 MIMDYIEGGELFSLLRKSQRFPNPVAKFYAAEVCLALEYLHSKDI  125 (316)
T ss_dssp             EEECCCCSCBHHHHHHHTSSCCHHHHHHHHHHHHHHHHHHHTTTE
T ss_pred             eEeeecCCccccccccccccccccHHHHHHHHHHHhhhhhccCcE
Confidence            999999999999999888889999999999999999999999864

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=99.95  E-value=1.2e-27  Score=151.65  Aligned_cols=120  Identities=14%  Similarity=0.088  Sum_probs=106.5

Q ss_pred             cccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCc-hhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCC----eE
Q psy8006           6 NIISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRST-DLKAEILHEVAVLEACRCNSRIVQLHQVFESSH----DM   80 (126)
Q Consensus         6 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~-~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~----~~   80 (126)
                      .|...+.||+|+||.||+|.+..+++.||+|+++...... .....+.+|+.+++.++| |||+++++.+...+    ..
T Consensus         8 rY~i~~~lG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~~l~~~~h-pniv~~~~~~~~~~~~~~~~   86 (277)
T d1o6ya_           8 RYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNH-PAIVAVYDTGEAETPAGPLP   86 (277)
T ss_dssp             TEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTTTCHHHHHHHHHHHHHHHTCCC-TTBCCEEEEEEEECSSSEEE
T ss_pred             eeEEeEEEeeCCCeEEEEEEECCCCCEEEEEEEchhhccCHHHHHHHHHHHHHHHhcCC-CCCCcccceeeeccCCCceE
Confidence            3778899999999999999999999999999998765533 334569999999999999 99999999987543    48


Q ss_pred             EEEEeccCcccHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          81 ILLLELLTSAVDSKIRESFGSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        81 ~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      |+||||+++++|.+++...+.+++.+++.++.|++.|++|||+.++
T Consensus        87 ~lvmE~~~g~~L~~~~~~~~~l~~~~~~~i~~qi~~al~~lH~~~i  132 (277)
T d1o6ya_          87 YIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQNGI  132 (277)
T ss_dssp             EEEEECCCEEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred             EEEEECCCCCEehhhhcccCCCCHHHHHHHHHHHHHHHHHHHhCCc
Confidence            9999999999999999888889999999999999999999998764

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.95  E-value=1.3e-27  Score=152.11  Aligned_cols=118  Identities=19%  Similarity=0.121  Sum_probs=105.2

Q ss_pred             ccccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeEEEEE
Q psy8006           5 KNIISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLL   84 (126)
Q Consensus         5 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~~lv~   84 (126)
                      ++|...+.||+|+||.||+|.+..++..||+|.++....   ..+.+.+|+.++.+++| |||+++++++..++..+++|
T Consensus        17 ~~~~~~~~iG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~---~~~~~~~E~~il~~l~H-pnIv~~~~~~~~~~~~~iv~   92 (287)
T d1opja_          17 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM---EVEEFLKEAAVMKEIKH-PNLVQLLGVCTREPPFYIIT   92 (287)
T ss_dssp             GGEEEEEETTTTTTSSEEEEEEGGGTEEEEEEECCTTCS---CHHHHHHHHHHHHHCCC-TTBCCEEEEECSSSSCEEEE
T ss_pred             HHeEEeeEEeeCCCeEEEEEEECCCCeEEEEEEECCccc---hHHHHHHHHHHHHhCCC-CCEecCCccEeeCCeeEEEe
Confidence            456678899999999999999999999999999976543   24479999999999998 99999999999999999999


Q ss_pred             eccCcccHHHHHHhc--CCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          85 ELLTSAVDSKIRESF--GSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        85 e~~~~~~L~~~~~~~--~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      ||+++|+|.+++...  ..+++..+..++.|++.|++|||+.++
T Consensus        93 E~~~~g~l~~~l~~~~~~~~~~~~~~~i~~qi~~gL~yLH~~~i  136 (287)
T d1opja_          93 EFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNF  136 (287)
T ss_dssp             ECCTTCBHHHHHHHSCTTTSCHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred             ecccCcchHHHhhhccccchHHHHHHHHHHHHHHHHHHHHHCCc
Confidence            999999999888653  478999999999999999999998764

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.95  E-value=1.5e-27  Score=151.25  Aligned_cols=116  Identities=17%  Similarity=0.192  Sum_probs=97.7

Q ss_pred             ceeeccCccceeEEEEEEc--cCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeEEEEEec
Q psy8006           9 SSIINDMGKYATVRRCRDR--KNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLLEL   86 (126)
Q Consensus         9 ~~~~lg~g~~~~v~~~~~~--~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~~lv~e~   86 (126)
                      .++.||+|+||.||+|.+.  .+++.||+|.++....+......+.+|+.++++++| |||+++++++.. +..++||||
T Consensus        11 e~k~iG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~H-pnIv~~~g~~~~-~~~~lvmE~   88 (277)
T d1xbba_          11 EDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDN-PYIVRMIGICEA-ESWMLVMEM   88 (277)
T ss_dssp             EEEEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCC-TTBCCEEEEEES-SSEEEEEEC
T ss_pred             cCCCcccCCCeEEEEEEEccCCcCeEEEEEEEChhhCCHHHHHHHHHHHHHHHhCCC-CCCceEEEEecc-CCEEEEEEc
Confidence            4568999999999999864  445689999997665555555679999999999998 999999999864 457899999


Q ss_pred             cCcccHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          87 LTSAVDSKIRESFGSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        87 ~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      +++|+|.+++.....+++..+..++.|++.|++|||+.++
T Consensus        89 ~~~g~L~~~l~~~~~l~~~~~~~i~~qi~~gl~ylH~~~i  128 (277)
T d1xbba_          89 AELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNF  128 (277)
T ss_dssp             CTTEEHHHHHHHCTTCCHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred             CCCCcHHHHHhhccCCCHHHHHHHHHHHHHHHhhHHhCCc
Confidence            9999999999988889999999999999999999998763

>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.95  E-value=2e-27  Score=151.94  Aligned_cols=122  Identities=16%  Similarity=0.251  Sum_probs=102.1

Q ss_pred             cccccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeEEEE
Q psy8006           4 IKNIISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILL   83 (126)
Q Consensus         4 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~~lv   83 (126)
                      +++|...+.||+|+||.||+|.+..++..||+|++......+.....+.+|+.++++++| |||+++++++.+++.+|+|
T Consensus         1 ~d~Y~~~~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~H-p~Iv~~~~~~~~~~~~~iv   79 (298)
T d1gz8a_           1 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH-PNIVKLLDVIHTENKLYLV   79 (298)
T ss_dssp             CTTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEC-------CCHHHHHHHHHHTTCCC-TTBCCEEEEEEETTEEEEE
T ss_pred             CCCCEeccEEecCcCeEEEEEEECCCCCEEEEEEEehhhcChHHHHHHHHHHHHHHhCCC-CcEEEeccccccccceeEE
Confidence            468888999999999999999999999999999997665443344578999999999998 9999999999999999999


Q ss_pred             EeccCcccHHHHHHh-cCCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          84 LELLTSAVDSKIRES-FGSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        84 ~e~~~~~~L~~~~~~-~~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      |||+.++.+...... ...+++..++.++.|++.|++|||+.++
T Consensus        80 ~e~~~~~~~~~~~~~~~~~l~e~~~~~~~~qil~~L~yLH~~~I  123 (298)
T d1gz8a_          80 FEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRV  123 (298)
T ss_dssp             EECCSEEHHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred             EeecCCchhhhhhhhcccCCCHHHHHHHHHHHHHHHHHhhcCCE
Confidence            999998844433333 4569999999999999999999999875

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

Probab=99.95  E-value=1.5e-27  Score=156.18  Aligned_cols=123  Identities=20%  Similarity=0.278  Sum_probs=104.6

Q ss_pred             ccccccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCch-hHHHHHHH---HHHHHHhcCCCCceeeeeeeEeCC
Q psy8006           3 NIKNIISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTD-LKAEILHE---VAVLEACRCNSRIVQLHQVFESSH   78 (126)
Q Consensus         3 ~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~-~~~~~~~e---~~~l~~~~~~~~iv~l~~~~~~~~   78 (126)
                      ++++|...+.||+|+||.||+|.+..+|..||+|++.+...... ....+.+|   +.++..++| |||+++++++..++
T Consensus         2 slddy~i~~~lG~G~fg~Vy~~~~~~t~~~vAiK~i~~~~~~~~~~~~~~~~e~~~~~~l~~~~h-pnIv~l~~~~~~~~   80 (364)
T d1omwa3           2 TMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDC-PFIVCMSYAFHTPD   80 (364)
T ss_dssp             CSTTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHHHHSSSCC-TTBCCEEEEEECSS
T ss_pred             CHHhCeeeeEEecCCCeEEEEEEECCCCCEEEEEEEchHHcchhhHHHHHHHHHHHHHHHhcCCC-CcEEEEEEEEEECC
Confidence            46789999999999999999999999999999999986543211 12234444   455556667 99999999999999


Q ss_pred             eEEEEEeccCcccHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          79 DMILLLELLTSAVDSKIRESFGSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        79 ~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      ..|+||||+++|+|.+++.....+++..++.++.|++.|++|||+.++
T Consensus        81 ~~~ivmE~~~gg~L~~~l~~~~~~~e~~~~~~~~qi~~aL~ylH~~~i  128 (364)
T d1omwa3          81 KLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHNRFV  128 (364)
T ss_dssp             EEEEEECCCCSCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred             EEEEEEEecCCCcHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHCCc
Confidence            999999999999999999888889999999999999999999999764

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.95  E-value=3.9e-27  Score=153.47  Aligned_cols=122  Identities=17%  Similarity=0.262  Sum_probs=109.5

Q ss_pred             cccccceeeccCccceeEEEEEEccCCcEEEEEEeecCCC-CchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeEEE
Q psy8006           4 IKNIISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRR-STDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMIL   82 (126)
Q Consensus         4 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~-~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~~l   82 (126)
                      +++|...+.||+|+||.||+|.+..+|..||+|++..... .......+.+|+.+++.++| |||+++++.+......++
T Consensus        40 ld~y~i~~~lG~G~fg~Vy~a~~~~~g~~~AvK~i~~~~~~~~~~~~~~~~E~~il~~l~h-pnIv~~~~~~~~~~~~~~  118 (350)
T d1rdqe_          40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF-PFLVKLEFSFKDNSNLYM  118 (350)
T ss_dssp             GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCC-TTBCCEEEEEECSSEEEE
T ss_pred             ccCeEEEEEeecCcCcEEEEEEECCCCCEEEEEEEchHHccCHHHHHHHHHHHHHHHHcCC-CcEeeccccccccccccc
Confidence            5678888999999999999999999999999999976432 22334568999999999998 999999999999999999


Q ss_pred             EEeccCcccHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          83 LLELLTSAVDSKIRESFGSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        83 v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      |||++.+|+|.+++...+.+++..++.++.|++.||.|||+.++
T Consensus       119 v~e~~~~g~l~~~l~~~~~l~e~~~~~i~~qi~~aL~yLH~~~i  162 (350)
T d1rdqe_         119 VMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDL  162 (350)
T ss_dssp             EEECCTTCBHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred             ccccccccchhhhHhhcCCCCHHHHHHHHHHHHHHHHHHHhCCE
Confidence            99999999999998887889999999999999999999998764

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.94  E-value=6.2e-27  Score=151.76  Aligned_cols=116  Identities=15%  Similarity=0.173  Sum_probs=98.5

Q ss_pred             cccccc-eeeccCccceeEEEEEEccCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEe----CC
Q psy8006           4 IKNIIS-SIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFES----SH   78 (126)
Q Consensus         4 ~~~~~~-~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~----~~   78 (126)
                      +++|.. +++||+|+||.||+|.+..++..||+|+++..       ....+|+.++.++.+||||+++++++.+    ..
T Consensus        10 ~~~y~i~~~~lG~G~fg~Vy~a~~~~~~~~vAiK~i~~~-------~~~~~E~~~~~~~~~hpnIv~l~~~~~~~~~~~~   82 (335)
T d2ozaa1          10 IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC-------PKARREVELHWRASQCPHIVRIVDVYENLYAGRK   82 (335)
T ss_dssp             GGTEEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEECS-------HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEE
T ss_pred             ccCEEEeeEEeeeccCeEEEEEEECCCCCEEEEEEECCc-------HHHHHHHHHHHHhcCCCCCCeEEEEEeecccCCC
Confidence            345643 56799999999999999999999999999643       2577899988776444999999999865    45


Q ss_pred             eEEEEEeccCcccHHHHHHhc--CCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          79 DMILLLELLTSAVDSKIRESF--GSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        79 ~~~lv~e~~~~~~L~~~~~~~--~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      .+|+|||||++|+|.+++..+  ..+++.+++.++.|++.|++|||+.++
T Consensus        83 ~~~ivmEy~~gg~L~~~i~~~~~~~l~e~~~~~i~~qi~~al~ylH~~~i  132 (335)
T d2ozaa1          83 CLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINI  132 (335)
T ss_dssp             EEEEEEECCCSEEHHHHHHSCSCCCEEHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred             EEEEEEECCCCCcHHHHHHhcCCCCcCHHHHHHHHHHHHHHHHHHHHcCC
Confidence            789999999999999999764  369999999999999999999999764

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.94  E-value=1.1e-26  Score=148.57  Aligned_cols=120  Identities=13%  Similarity=0.163  Sum_probs=101.5

Q ss_pred             ccccceeeccCccceeEEEEEEccCCc---EEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeEE
Q psy8006           5 KNIISSIINDMGKYATVRRCRDRKNGT---QYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMI   81 (126)
Q Consensus         5 ~~~~~~~~lg~g~~~~v~~~~~~~~~~---~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~~   81 (126)
                      ++|...+.||+|+||.||+|.+..++.   .+|+|.+..... ....+.+.+|+.++++++| |||+++++++..++..+
T Consensus        26 ~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~H-pnIv~l~g~~~~~~~~~  103 (299)
T d1jpaa_          26 SCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYT-EKQRRDFLSEASIMGQFDH-PNVIHLEGVVTKSTPVM  103 (299)
T ss_dssp             GGEEEEEEEEECSSSEEEEEEECC---CCEEEEEEECCSSCC-HHHHHHHHHHHHHHTTCCC-TTBCCEEEEECSSSSCE
T ss_pred             hhcEEeeEEeeCCCeEEEEEEEeCCCCEEEEEEEEEECcccC-HHHHHHHHHHHHHHHhCCC-CCCccEEEEEeeCCEEE
Confidence            456667899999999999999876654   588888865443 3344569999999999998 99999999999999999


Q ss_pred             EEEeccCcccHHHHHHh-cCCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          82 LLLELLTSAVDSKIRES-FGSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        82 lv~e~~~~~~L~~~~~~-~~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      +||||+++|+|.+++.. .+.+++.++..++.|++.||+|||+.++
T Consensus       104 iv~Ey~~~g~L~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~i  149 (299)
T d1jpaa_         104 IITEFMENGSLDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLADMNY  149 (299)
T ss_dssp             EEEECCTTEEHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred             EEEEecCCCcceeeeccccCCCCHHHHHHHHHHHHHHHHHHhhCCC
Confidence            99999999999988876 4579999999999999999999998764

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.94  E-value=1.9e-26  Score=144.77  Aligned_cols=117  Identities=14%  Similarity=0.139  Sum_probs=103.5

Q ss_pred             ccccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeEEEEE
Q psy8006           5 KNIISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLL   84 (126)
Q Consensus         5 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~~lv~   84 (126)
                      ++|...+.||+|+||.||+|.++ ++..||+|.++.....   ...+.+|+.++.+++| |||+++++++.+++.+++||
T Consensus         4 ~~~~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~~~~---~~~~~~Ev~~~~~l~H-pnIv~~~g~~~~~~~~~iv~   78 (258)
T d1k2pa_           4 KDLTFLKELGTGQFGVVKYGKWR-GQYDVAIKMIKEGSMS---EDEFIEEAKVMMNLSH-EKLVQLYGVCTKQRPIFIIT   78 (258)
T ss_dssp             CCCCCCCCCCEETTEEEEEEEET-TTEEEEEEEEESSSSC---HHHHHHHHHHHHTCCC-TTBCCEEEEECCSSSEEEEE
T ss_pred             HHCEEeEEEecCCCeEEEEEEEC-CCCEEEEEEECcCcCC---HHHHHHHHHHHHhcCC-CceeeEEEEEeeCCceEEEE
Confidence            67888899999999999999984 6788999999876543   3469999999999998 99999999999999999999


Q ss_pred             eccCcccHHHHHHh-cCCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          85 ELLTSAVDSKIRES-FGSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        85 e~~~~~~L~~~~~~-~~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      ||+++|++.+++.. ...+++..+..++.|+++|++|||+.++
T Consensus        79 Ey~~~g~l~~~~~~~~~~~~~~~~~~i~~qi~~gl~~LH~~~i  121 (258)
T d1k2pa_          79 EYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQF  121 (258)
T ss_dssp             ECCTTEEHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHTTB
T ss_pred             EccCCCcHHHhhhccccCCcHHHHHHHHHHHHHHHHHHhhcCc
Confidence            99999999887654 4578999999999999999999998764

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.94  E-value=3e-27  Score=151.17  Aligned_cols=116  Identities=17%  Similarity=0.271  Sum_probs=98.2

Q ss_pred             eeeccCccceeEEEEEEccCCcEEEEEEeecCCCCch---hHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeEEEEEec
Q psy8006          10 SIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTD---LKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLLEL   86 (126)
Q Consensus        10 ~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~---~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~~lv~e~   86 (126)
                      -++||+|+||.||+|.+..+|..||+|+++.......   ....+.+|+.++.+++| |||+++++++..++..|+||||
T Consensus         3 l~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~Ei~il~~l~h-pnIv~~~~~~~~~~~~~ivmE~   81 (299)
T d1ua2a_           3 LDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSH-PNIIGLLDAFGHKSNISLVFDF   81 (299)
T ss_dssp             EEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCC-TTBCCEEEEECCTTCCEEEEEC
T ss_pred             ceEeccCcCeEEEEEEECCCCcEEEEEEEehhhhhhhhHHHHHHHHHHHHHHHhCCC-CCEeEEEeeeccCCceeehhhh
Confidence            3689999999999999999999999999976543221   12358899999999998 9999999999999999999999


Q ss_pred             cCcccHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          87 LTSAVDSKIRESFGSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        87 ~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      +.++++..+...+..+++..+..++.|++.|++|||+.++
T Consensus        82 ~~~~~~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~i  121 (299)
T d1ua2a_          82 METDLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLHQHWI  121 (299)
T ss_dssp             CSEEHHHHHTTCCSSCCSSHHHHHHHHHHHHHHHHHHTTC
T ss_pred             hcchHHhhhhhcccCCCHHHHHHHHHHHHHHHHHhhccce
Confidence            9999777777766789999999999999999999999875

>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK5
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.94  E-value=6.2e-26  Score=144.36  Aligned_cols=121  Identities=18%  Similarity=0.228  Sum_probs=110.2

Q ss_pred             ccccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeEEEEE
Q psy8006           5 KNIISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLL   84 (126)
Q Consensus         5 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~~lv~   84 (126)
                      +.|...+.||+|+||.||+|.+..++..||+|+++...........+.+|+.+++.++| |||+++++.+..+...++++
T Consensus         2 ~ry~~i~~LG~G~fg~V~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~h-~niv~~~~~~~~~~~~~iv~   80 (292)
T d1unla_           2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKH-KNIVRLHDVLHSDKKLTLVF   80 (292)
T ss_dssp             CSEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCC-TTBCCEEEEEECSSEEEEEE
T ss_pred             CCCEeeeEEecCcCeEEEEEEECCCCcEEEEEEEehhhCChHHHHHHHHHHHHHHhcCc-CCEEeeccccccccceeEEe
Confidence            46778899999999999999999999999999998766555556679999999999999 99999999999999999999


Q ss_pred             eccCcccHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          85 ELLTSAVDSKIRESFGSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        85 e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      +++.++++..++...+.+++..++.++.|++.|++|||+.++
T Consensus        81 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~q~~~aL~~lH~~~I  122 (292)
T d1unla_          81 EFCDQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSRNV  122 (292)
T ss_dssp             ECCSEEHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred             eeccccccccccccccccchhHHHHHHHHHHHHHHHhhcCCE
Confidence            999999888888887889999999999999999999998764

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.94  E-value=5.2e-26  Score=143.13  Aligned_cols=117  Identities=15%  Similarity=0.104  Sum_probs=102.6

Q ss_pred             ccccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeEEEEE
Q psy8006           5 KNIISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLL   84 (126)
Q Consensus         5 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~~lv~   84 (126)
                      ++|...+.||+|+||.||+|.+. ++..||+|.++.....   ...+.+|+.++.+++| |||+++++++..++..++||
T Consensus         5 ~~~~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~i~~~~~~---~~~~~~E~~~l~~l~H-pnIv~~~g~~~~~~~~~lv~   79 (263)
T d1sm2a_           5 SELTFVQEIGSGQFGLVHLGYWL-NKDKVAIKTIREGAMS---EEDFIEEAEVMMKLSH-PKLVQLYGVCLEQAPICLVF   79 (263)
T ss_dssp             SCEEEEEEEECCSSCCEEEEEET-TTEEEEEEECCSSSSC---HHHHHHHHHHHHHCCC-TTBCCEEEEECSSSSCEEEE
T ss_pred             HHcEEEEEEeeCCCeEEEEEEEC-CCCEEEEEEECCCcCc---HHHHHHHHHHHHhcCC-CCcccccceeccCCceEEEE
Confidence            46777889999999999999875 4678999999765433   3469999999999998 99999999999999999999


Q ss_pred             eccCcccHHHHHHhc-CCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          85 ELLTSAVDSKIRESF-GSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        85 e~~~~~~L~~~~~~~-~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      ||+++|+|.+++... ..+++..+..++.|++.|++|||+.++
T Consensus        80 E~~~~g~L~~~l~~~~~~~~~~~~~~i~~qia~gl~~lH~~~i  122 (263)
T d1sm2a_          80 EFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACV  122 (263)
T ss_dssp             ECCTTCBHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred             EecCCCcHHHHhhccccCCCHHHHHHHHHHHHHHHHhhhccce
Confidence            999999999987653 568999999999999999999998764

>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: (Plasmodium falciparum) [TaxId: 5833]

Probab=99.94  E-value=2.8e-26  Score=145.79  Aligned_cols=120  Identities=16%  Similarity=0.259  Sum_probs=106.7

Q ss_pred             ccccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeEEEEE
Q psy8006           5 KNIISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLL   84 (126)
Q Consensus         5 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~~lv~   84 (126)
                      ++|...+.||+|+||.||+|.+. ++..||+|+++...........+.+|+.++++++| |||+++++.+..++..++++
T Consensus         2 ~~Y~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~h-pnIv~~~~~~~~~~~~~i~~   79 (286)
T d1ob3a_           2 EKYHGLEKIGEGTYGVVYKAQNN-YGETFALKKIRLEKEDEGIPSTTIREISILKELKH-SNIVKLYDVIHTKKRLVLVF   79 (286)
T ss_dssp             CSEEEEEEEEEETTEEEEEEEET-TSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCC-TTBCCEEEEEECSSCEEEEE
T ss_pred             CCceeccEEecCCCcEEEEEEeC-CCCEEEEEEEehhhcChHHHHHHHHHHHHHHhCCC-CcEEeeeeecccCCceeEEE
Confidence            46778889999999999999985 78999999998765444445578999999999998 99999999999999999999


Q ss_pred             eccCcccHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          85 ELLTSAVDSKIRESFGSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        85 e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      |++.++.+..+.+.++.+++..+..++.|++.||+|||+.++
T Consensus        80 e~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~I  121 (286)
T d1ob3a_          80 EHLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRRV  121 (286)
T ss_dssp             ECCSEEHHHHHHTSTTCCCHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred             EeehhhhHHHHHhhcCCcchhhhHHHHHHHHHHHHHhccCcE
Confidence            999999777777777889999999999999999999999875

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.94  E-value=1.1e-25  Score=142.96  Aligned_cols=119  Identities=18%  Similarity=0.182  Sum_probs=98.1

Q ss_pred             cccccee-eccCccceeEEEEEEcc--CCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeEE
Q psy8006           5 KNIISSI-INDMGKYATVRRCRDRK--NGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMI   81 (126)
Q Consensus         5 ~~~~~~~-~lg~g~~~~v~~~~~~~--~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~~   81 (126)
                      +++...+ .||+|+||.||+|.++.  ++..||||.++... .......+.+|+.++.+++| |||+++++++.. +.+|
T Consensus         8 ~~~~~~~~~iG~G~fg~Vy~~~~~~~~~~~~vAvK~l~~~~-~~~~~~~~~~E~~il~~l~H-pnIv~l~g~~~~-~~~~   84 (285)
T d1u59a_           8 DNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGT-EKADTEEMMREAQIMHQLDN-PYIVRLIGVCQA-EALM   84 (285)
T ss_dssp             GGEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSSC-CHHHHHHHHHHHHHHHHCCC-TTBCCEEEEEES-SSEE
T ss_pred             cCeEECCcEEecccCeEEEEEEEecCCCcEEEEEEEEChhc-CHHHHHHHHHHHHHHHhCCC-CCEeeEeeeecc-CeEE
Confidence            3455555 49999999999998754  34579999997653 23345579999999999998 999999998864 4689


Q ss_pred             EEEeccCcccHHHHHHh-cCCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          82 LLLELLTSAVDSKIRES-FGSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        82 lv~e~~~~~~L~~~~~~-~~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      +||||+++|+|.+++.. +..+++..+..++.|++.||+|||+.++
T Consensus        85 lvmE~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~ylH~~~i  130 (285)
T d1u59a_          85 LVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKNF  130 (285)
T ss_dssp             EEEECCTTEEHHHHHTTCTTTSCHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred             EEEEeCCCCcHHHHhhccccCCCHHHHHHHHHHHHHHHHHHHhCCe
Confidence            99999999999998754 4579999999999999999999998753

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.93  E-value=9.5e-26  Score=142.78  Aligned_cols=117  Identities=12%  Similarity=0.036  Sum_probs=100.8

Q ss_pred             ccccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeEEEEE
Q psy8006           5 KNIISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLL   84 (126)
Q Consensus         5 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~~lv~   84 (126)
                      ++|...+.||+|+||.||+|...   ..+|+|+++.........+.+.+|+.++.+++| |||+++++++. .+.+++||
T Consensus         8 ~~~~~~~~lG~G~fg~Vy~~~~~---~~vAvK~~~~~~~~~~~~~~~~~E~~~l~~l~H-pnIv~~~~~~~-~~~~~lv~   82 (276)
T d1uwha_           8 GQITVGQRIGSGSFGTVYKGKWH---GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRH-VNILLFMGYST-APQLAIVT   82 (276)
T ss_dssp             TCCCCCSEEEECSSCEEEEEESS---SEEEEEECCCSSCCTTHHHHHHHHHHHHTTCCC-TTBCCEEEEEC-SSSCEEEE
T ss_pred             ccEEEEEEEeeCCCcEEEEEEEC---CEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCC-CCEeeeeEEEe-ccEEEEEE
Confidence            45777889999999999999754   359999998776655556679999999999998 99999998764 45689999


Q ss_pred             eccCcccHHHHHHh-cCCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          85 ELLTSAVDSKIRES-FGSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        85 e~~~~~~L~~~~~~-~~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      ||+++|+|.+++.. +..+++..+..++.|++.|++|||+.++
T Consensus        83 Ey~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~gl~yLH~~~i  125 (276)
T d1uwha_          83 QWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSI  125 (276)
T ss_dssp             ECCCEEEHHHHHHTSCCCCCHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred             ecCCCCCHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHhcCCE
Confidence            99999999998865 4579999999999999999999998764

>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Proto-oncogene serine/threonine-protein kinase Pim-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.93  E-value=6.9e-26  Score=143.22  Aligned_cols=121  Identities=16%  Similarity=0.121  Sum_probs=104.3

Q ss_pred             cccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCch----hHHHHHHHHHHHHHhcC-CCCceeeeeeeEeCCeE
Q psy8006           6 NIISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTD----LKAEILHEVAVLEACRC-NSRIVQLHQVFESSHDM   80 (126)
Q Consensus         6 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~----~~~~~~~e~~~l~~~~~-~~~iv~l~~~~~~~~~~   80 (126)
                      .|...+.||+|+||.||+|.+..++..||+|.+........    ....+.+|+.+++++++ ||||+++++++.+++..
T Consensus         5 ~Y~i~~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~~~h~nIv~~~~~~~~~~~~   84 (273)
T d1xwsa_           5 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSF   84 (273)
T ss_dssp             TEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEECSSEE
T ss_pred             eEEEeEEEeeCCCeEEEEEEECCCCCEEEEEEEehHHccchhhhhHHHHHHHHHHHHHHhccCCCCccEEEEEEeeCCeE
Confidence            47788999999999999999999999999999987544221    11236789999999973 49999999999999999


Q ss_pred             EEEEeccCc-ccHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          81 ILLLELLTS-AVDSKIRESFGSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        81 ~lv~e~~~~-~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      |+|||++.+ +++.+++..+..+++..++.++.|++.|++|||+.++
T Consensus        85 ~lv~e~~~~~~~l~~~~~~~~~l~e~~~~~~~~qi~~al~~lH~~~i  131 (273)
T d1xwsa_          85 VLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGV  131 (273)
T ss_dssp             EEEEECCSSEEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred             EEEEEeccCcchHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCC
Confidence            999999976 5678888888889999999999999999999998764

>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Ribosomal protein S6 kinase alpha 5, Msk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.93  E-value=7.9e-26  Score=145.87  Aligned_cols=124  Identities=23%  Similarity=0.241  Sum_probs=108.3

Q ss_pred             ccccccceeeccCccceeEEEEEEc---cCCcEEEEEEeecCCCC--chhHHHHHHHHHHHHHhcCCCCceeeeeeeEeC
Q psy8006           3 NIKNIISSIINDMGKYATVRRCRDR---KNGTQYAAKFLRKKRRS--TDLKAEILHEVAVLEACRCNSRIVQLHQVFESS   77 (126)
Q Consensus         3 ~~~~~~~~~~lg~g~~~~v~~~~~~---~~~~~~aiK~~~~~~~~--~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~   77 (126)
                      ++++|...+.||+|+||.||+|.+.   .+|..||+|.+++....  ....+.+.+|+.++.+++|+|||+++++.+...
T Consensus        22 ~l~~y~~~~~IG~G~fg~Vy~~~~~~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~~E~~il~~l~h~pnIv~~~~~~~~~  101 (322)
T d1vzoa_          22 GIENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTE  101 (322)
T ss_dssp             CGGGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEET
T ss_pred             chhceEEEEEEecCCCeEEEEEEECccCCCCcEEEEEEEehHHhccchHHHHHHHHHHHHHHhccCCCeEEEeeeeeccC
Confidence            3567888999999999999999873   46889999999765431  122345889999999999889999999999999


Q ss_pred             CeEEEEEeccCcccHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          78 HDMILLLELLTSAVDSKIRESFGSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        78 ~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      ...+++|||+.+++|.+++.....+++..+..++.|++.|++|+|+.++
T Consensus       102 ~~~~~v~e~~~~~~L~~~i~~~~~~~e~~~~~~~~Qi~~al~~lH~~~i  150 (322)
T d1vzoa_         102 TKLHLILDYINGGELFTHLSQRERFTEHEVQIYVGEIVLALEHLHKLGI  150 (322)
T ss_dssp             TEEEEEECCCCSCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred             CceeeeeecccccHHHHHHHhcccccHHHHHHHHHHHHHHHHHhhcCCE
Confidence            9999999999999999999888889999999999999999999999864

>d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-jun N-terminal kinase (jnk3s)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.93  E-value=4.6e-25  Score=143.92  Aligned_cols=118  Identities=15%  Similarity=0.139  Sum_probs=99.8

Q ss_pred             ccccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEe------CC
Q psy8006           5 KNIISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFES------SH   78 (126)
Q Consensus         5 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~------~~   78 (126)
                      +.|...++||+|+||+||+|.+..+|..||+|++............+.+|+.++..++| |||+++++++..      ..
T Consensus        17 ~~Y~i~~~LG~G~fg~V~~~~d~~t~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~h-pnIv~~~~~f~~~~~~~~~~   95 (355)
T d2b1pa1          17 KRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNH-KNIISLLNVFTPQKTLEEFQ   95 (355)
T ss_dssp             TTEEEEEECSCC--CEEEEEEETTTTEEEEEEEEESTTSSHHHHHHHHHHHHHHHHCCC-TTBCCCSEEECSCCSTTTCC
T ss_pred             CCeEEEEEeecCcCeEEEEEEECCCCCEEEEEEEChhhcCHHHHHHHHHHHHHHHhcCC-CCeeEEEEEEecccccccCc
Confidence            45777889999999999999999999999999998776655555578999999999998 999999999853      35


Q ss_pred             eEEEEEeccCcccHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          79 DMILLLELLTSAVDSKIRESFGSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        79 ~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      .+|+||||+.++++. .+.  ..+++..++.++.|++.|++|||+.++
T Consensus        96 ~~~iv~Ey~~~~l~~-~~~--~~~~~~~i~~~~~qil~gl~~LH~~gi  140 (355)
T d2b1pa1          96 DVYLVMELMDANLCQ-VIQ--MELDHERMSYLLYQMLCGIKHLHSAGI  140 (355)
T ss_dssp             EEEEEEECCSEEHHH-HHT--SCCCHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred             eeEEEEeccchHHHH-hhh--cCCCHHHHHHHHHHHHHHHHHhhhccc
Confidence            789999999888544 443  368999999999999999999999875

>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38-gamma
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.93  E-value=2.2e-25  Score=144.99  Aligned_cols=119  Identities=17%  Similarity=0.185  Sum_probs=96.2

Q ss_pred             ccccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCC------
Q psy8006           5 KNIISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSH------   78 (126)
Q Consensus         5 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~------   78 (126)
                      +.|...+.||+|+||.||+|.+..+|+.||+|++..........+.+.+|+.+++.++| ||++++++++...+      
T Consensus        18 ~~Y~~i~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~h-pniv~l~~~~~~~~~~~~~~   96 (346)
T d1cm8a_          18 AVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRH-ENVIGLLDVFTPDETLDDFT   96 (346)
T ss_dssp             SSEEEEEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCB-TTBCCCSEEECSCSSTTTCC
T ss_pred             CcEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEchhhcChHHHHHHHHHHHHHHhcCC-CCeeEEEEEeccCccccccc
Confidence            34667789999999999999999999999999998765555556679999999999998 99999999987554      


Q ss_pred             eEEEEEeccCcccHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          79 DMILLLELLTSAVDSKIRESFGSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        79 ~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      .+|+||||++ .+|..+.+. ..+++..++.++.|++.||+|||+.++
T Consensus        97 ~~~lv~e~~~-~~l~~~~~~-~~l~~~~~~~~~~qi~~aL~~LH~~~I  142 (346)
T d1cm8a_          97 DFYLVMPFMG-TDLGKLMKH-EKLGEDRIQFLVYQMLKGLRYIHAAGI  142 (346)
T ss_dssp             CCEEEEECCS-EEHHHHHHH-CCCCHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred             eEEEEEeccc-ccHHHHHHh-ccccHHHHHHHHHHHHHHHHHHHhCCC
Confidence            5799999994 447777664 579999999999999999999998764

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.93  E-value=3.4e-25  Score=142.20  Aligned_cols=123  Identities=16%  Similarity=0.133  Sum_probs=101.7

Q ss_pred             ccccccceeeccCccceeEEEEEEccCCcE--EEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeE
Q psy8006           3 NIKNIISSIINDMGKYATVRRCRDRKNGTQ--YAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDM   80 (126)
Q Consensus         3 ~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~--~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~   80 (126)
                      ++++|...+.||+|+||.||+|.+..++..  +|||.++.... ....+.+.+|+.++.++.+||||+++++++...+..
T Consensus         8 ~~~~~~~~~~iG~G~fg~Vy~~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~   86 (309)
T d1fvra_           8 DWNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYAS-KDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYL   86 (309)
T ss_dssp             CGGGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC-------CHHHHHHHHHTTCCCCTTBCCEEEEEEETTEE
T ss_pred             CHHHcEEEEEEeeCCCcEEEEEEECCCCeEEEEEEEEECcccC-hHHHHHHHHHHHHHHhccCCCCEeeEEEEEecCCee
Confidence            356788889999999999999999888774  67787764432 233446999999999994339999999999999999


Q ss_pred             EEEEeccCcccHHHHHHhc----------------CCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          81 ILLLELLTSAVDSKIRESF----------------GSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        81 ~lv~e~~~~~~L~~~~~~~----------------~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      ++||||+++|+|.+++..+                ..+++..+..++.|++.|+.|||+.++
T Consensus        87 ~iV~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~~lH~~~i  148 (309)
T d1fvra_          87 YLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQF  148 (309)
T ss_dssp             EEEECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred             EEEEEecCCCcHHHHHhhccccccchhhhccccccCCCCHHHHHHHHHHHHHHHHhhhcCCc
Confidence            9999999999999988643                468999999999999999999998753

>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase CK2, alpha subunit
species: Rattus norvegicus [TaxId: 10116]

Probab=99.93  E-value=2.8e-25  Score=143.54  Aligned_cols=116  Identities=16%  Similarity=0.211  Sum_probs=100.6

Q ss_pred             ccccccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeC--CeE
Q psy8006           3 NIKNIISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESS--HDM   80 (126)
Q Consensus         3 ~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~--~~~   80 (126)
                      +.++|...+.||+|+||.||+|.+..++..||+|+++...     ...+.+|+.++.++++||||+++++.+...  ..+
T Consensus        33 ~~d~y~i~~~LG~G~fg~V~~a~~~~~~~~vAiK~i~~~~-----~~~~~~Ei~il~~l~~hpnIv~~~~~~~~~~~~~~  107 (328)
T d3bqca1          33 NQDDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVK-----KKKIKREIKILENLRGGPNIITLADIVKDPVSRTP  107 (328)
T ss_dssp             CGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSSC-----HHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCSE
T ss_pred             CCcCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEECHHH-----HHHHHHHHHHHHhccCCCCCcEEEEEEEecCCCce
Confidence            4567888999999999999999999999999999997532     346889999999997559999999998743  469


Q ss_pred             EEEEeccCcccHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          81 ILLLELLTSAVDSKIRESFGSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        81 ~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      ++||||+++++|..+.   ..+++..++.++.|++.||+|||+.++
T Consensus       108 ~~v~e~~~~~~L~~~~---~~l~e~~i~~i~~qil~aL~~LH~~gI  150 (328)
T d3bqca1         108 ALVFEHVNNTDFKQLY---QTLTDYDIRFYMYEILKALDYCHSMGI  150 (328)
T ss_dssp             EEEEECCCSCBGGGTT---TSCCHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred             eEEEeecCCCcHHHHh---cCCCHHHHHHHHHHHHHHHHHHhhccc
Confidence            9999999999886653   359999999999999999999999874

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.92  E-value=6.6e-25  Score=141.69  Aligned_cols=121  Identities=14%  Similarity=0.080  Sum_probs=98.3

Q ss_pred             ccccceeeccCccceeEEEEEEccCCc-----EEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCe
Q psy8006           5 KNIISSIINDMGKYATVRRCRDRKNGT-----QYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHD   79 (126)
Q Consensus         5 ~~~~~~~~lg~g~~~~v~~~~~~~~~~-----~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~   79 (126)
                      ++|...+.||+|+||.||+|.+..++.     .||+|.+..... ......+.+|+.++.++.+|||||++++++..++.
T Consensus        37 ~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~~HpnIv~l~~~~~~~~~  115 (325)
T d1rjba_          37 ENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKAD-SSEREALMSELKMMTQLGSHENIVNLLGACTLSGP  115 (325)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC-------CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSS
T ss_pred             HHeEEeeEEeeCCCeEEEEEEEcCCCcccceeEEEEEEeccccC-HHHHHHHHHHHHHHHHhcCCCcEeEEEEEEeeCCe
Confidence            456678899999999999999865543     689998875432 22334689999999999434999999999999999


Q ss_pred             EEEEEeccCcccHHHHHHhc-----------------------CCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          80 MILLLELLTSAVDSKIRESF-----------------------GSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        80 ~~lv~e~~~~~~L~~~~~~~-----------------------~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      .|+||||+++|+|.++++.+                       ..+++..++.++.|++.|++|||+.++
T Consensus       116 ~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~I  185 (325)
T d1rjba_         116 IYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKSC  185 (325)
T ss_dssp             CEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred             EEEEEEcCCCCcHHHHHHhccCCCcchhhhhccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhCCe
Confidence            99999999999999998653                       248899999999999999999998763

>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 9, CDK9
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.92  E-value=6e-25  Score=141.39  Aligned_cols=124  Identities=12%  Similarity=0.221  Sum_probs=103.0

Q ss_pred             cccccccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEe-----
Q psy8006           2 NNIKNIISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFES-----   76 (126)
Q Consensus         2 ~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~-----   76 (126)
                      +.+++|...+.||+|+||.||+|.+..+|+.||||++......+.....+.+|+.++++++| ||++++++.+..     
T Consensus         7 ~~~~rY~i~~~LG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~h-~nii~~~~~~~~~~~~~   85 (318)
T d3blha1           7 DEVSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKH-ENVVNLIEICRTKASPY   85 (318)
T ss_dssp             CBGGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEC----CTTSSCHHHHHHHHHHHHCCC-TTBCCEEEEEEC-----
T ss_pred             CccCCEEEEEEEecCcCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHHhcC-CCccceEeeeecccccc
Confidence            45788989999999999999999999999999999998765544445568899999999998 999999998754     


Q ss_pred             ---CCeEEEEEeccCcccHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          77 ---SHDMILLLELLTSAVDSKIRESFGSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        77 ---~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                         .+..|++||+++++++.........+++..++.++.|++.|+.|||+.++
T Consensus        86 ~~~~~~~~iv~e~~~~~~~~~~~~~~~~~~~~~~~~i~~qil~~l~~lH~~~i  138 (318)
T d3blha1          86 NRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIHRNKI  138 (318)
T ss_dssp             -----CEEEEEECCCEEHHHHHTCTTCCCCHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred             cccCceEEEEEeccCCCccchhhhcccccccHHHHHHHHHHHHHHHHhccCCE
Confidence               34589999999999666665666789999999999999999999998764

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.92  E-value=5.6e-25  Score=138.97  Aligned_cols=116  Identities=12%  Similarity=0.088  Sum_probs=98.6

Q ss_pred             ccccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeEEEEE
Q psy8006           5 KNIISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLL   84 (126)
Q Consensus         5 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~~lv~   84 (126)
                      ++|...+.||+|+||.||+|.+. ++..||||.++.....   ...+.+|+.++.+++| |||+++++++. ++..++||
T Consensus        13 ~~~~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~---~~~~~~E~~~l~~l~H-pnIv~~~g~~~-~~~~~iv~   86 (272)
T d1qpca_          13 ETLKLVERLGAGQFGEVWMGYYN-GHTKVAVKSLKQGSMS---PDAFLAEANLMKQLQH-QRLVRLYAVVT-QEPIYIIT   86 (272)
T ss_dssp             GGEEEEEEEEEETTEEEEEEEET-TTEEEEEEEECTTSSC---HHHHHHHHHHHHHCCC-TTBCCEEEEEC-SSSCEEEE
T ss_pred             HHeEEeEEEecCCCcEEEEEEEC-CCCEEEEEEEccCcCC---HHHHHHHHHHHHhCCC-CCEeEEEeeec-cCCeEEEE
Confidence            56777889999999999999975 5678999999765432   3469999999999998 99999999775 45679999


Q ss_pred             eccCcccHHHHHHh--cCCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          85 ELLTSAVDSKIRES--FGSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        85 e~~~~~~L~~~~~~--~~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      ||+++|+|.+++..  ...+++..+..++.|++.|+.|||+.++
T Consensus        87 Ey~~~g~L~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~lH~~~i  130 (272)
T d1qpca_          87 EYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNY  130 (272)
T ss_dssp             ECCTTCBHHHHTTSHHHHTCCHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred             EeCCCCcHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCc
Confidence            99999999887753  2369999999999999999999998753

>d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.92  E-value=7.4e-25  Score=142.45  Aligned_cols=120  Identities=18%  Similarity=0.181  Sum_probs=101.5

Q ss_pred             ccccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCC-----e
Q psy8006           5 KNIISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSH-----D   79 (126)
Q Consensus         5 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~-----~   79 (126)
                      +.|...+.||+|+||.||+|.+..+|..||+|+++....+......+.+|+.+++.++| ||++++++++....     .
T Consensus        18 ~rY~i~~~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~h-~~iv~~~~~~~~~~~~~~~~   96 (348)
T d2gfsa1          18 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKH-ENVIGLLDVFTPARSLEEFN   96 (348)
T ss_dssp             TTEEEEEECGGGTTSSEEEEEETTTTEEEEEEECSCTTSSHHHHHHHHHHHHHHHHCCC-TTBCCCSEEECSCSSTTTCC
T ss_pred             CCeEEEEEEecCCCeEEEEEEECCCCCEEEEEEECchhcChHHHHHHHHHHHHHHhcCC-CCeeeEEEEEeeccccccCc
Confidence            34777899999999999999999999999999998766555555578999999999998 99999999985332     2


Q ss_pred             EEEEEeccCcccHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          80 MILLLELLTSAVDSKIRESFGSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        80 ~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      .+++++++.+++|.+++.. ..+++..++.++.|++.||+|||+.++
T Consensus        97 ~~~i~~~~~gg~L~~~~~~-~~l~e~~~~~i~~qil~aL~~LH~~gi  142 (348)
T d2gfsa1          97 DVYLVTHLMGADLNNIVKC-QKLTDDHVQFLIYQILRGLKYIHSADI  142 (348)
T ss_dssp             CCEEEEECCSEEHHHHHTT-CCCCHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred             eEEEEEeecCCchhhhccc-ccccHHHHHHHHHHHHHHHHHHHhCCC
Confidence            3455666788889998865 569999999999999999999999875

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.92  E-value=2.5e-24  Score=136.67  Aligned_cols=119  Identities=14%  Similarity=0.183  Sum_probs=101.0

Q ss_pred             cccceeeccCccceeEEEEEEccCC----cEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeEE
Q psy8006           6 NIISSIINDMGKYATVRRCRDRKNG----TQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMI   81 (126)
Q Consensus         6 ~~~~~~~lg~g~~~~v~~~~~~~~~----~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~~   81 (126)
                      .|...++||+|+||.||+|..+.++    ..||+|.+..... +.....+.+|+.++.+++| |||+++++++...+..+
T Consensus         8 ~~~~~~~iG~G~fG~Vy~~~~~~~~~~~~~~vAvK~~~~~~~-~~~~~~~~~E~~il~~l~H-~nIv~~~g~~~~~~~~~   85 (283)
T d1mqba_           8 CVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYT-EKQRVDFLGEAGIMGQFSH-HNIIRLEGVISKYKPMM   85 (283)
T ss_dssp             TEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCC-HHHHHHHHHHHHHHHTCCC-TTBCCEEEEECSSSSEE
T ss_pred             HeEeeeEEeeCCCeEEEEEEEeCCCCEEEEEEEEEEECcccC-hHHHHHHHHHHHHHHhcCC-CCEeeeeEEEecCCceE
Confidence            4677899999999999999876554    4799999976543 3334468999999999998 99999999999999999


Q ss_pred             EEEeccCcccHHHHHHh-cCCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          82 LLLELLTSAVDSKIRES-FGSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        82 lv~e~~~~~~L~~~~~~-~~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      ++|||+.++++.+++.. ...+++.++..++.|++.|++|||+.++
T Consensus        86 ~v~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~i~~gl~~lH~~~i  131 (283)
T d1mqba_          86 IITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYLANMNY  131 (283)
T ss_dssp             EEEECCTTEEHHHHHHHTTTCSCHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred             EEEEecccCcchhhhhcccccccHHHHHHHHHHHHHhhhhcccccc
Confidence            99999999999877764 3579999999999999999999998764

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.92  E-value=2e-24  Score=137.23  Aligned_cols=116  Identities=15%  Similarity=0.121  Sum_probs=99.5

Q ss_pred             ccccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeEEEEE
Q psy8006           5 KNIISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLL   84 (126)
Q Consensus         5 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~~lv~   84 (126)
                      ++|...+.||+|+||.||+|.+..+ ..||+|.+......   ...+.+|+.++++++| |||+++++++. .+..++||
T Consensus        17 ~~~~i~~~iG~G~fg~Vy~~~~~~~-~~vAiK~l~~~~~~---~~~~~~E~~~l~~l~h-~nIv~~~g~~~-~~~~~lv~   90 (285)
T d1fmka3          17 ESLRLEVKLGQGCFGEVWMGTWNGT-TRVAIKTLKPGTMS---PEAFLQEAQVMKKLRH-EKLVQLYAVVS-EEPIYIVT   90 (285)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEETTT-EEEEEEECCTTSSC---HHHHHHHHHHHHHCCC-TTBCCEEEEEC-SSSCEEEE
T ss_pred             HHEEEeeEEeeCCCeEEEEEEECCC-CEEEEEEECcccCC---HHHHHHHHHHHHhccc-CCEeEEEEEEe-cCCeEEEE
Confidence            5678889999999999999998654 56999999765432   3469999999999999 99999999885 45689999


Q ss_pred             eccCcccHHHHHHh--cCCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          85 ELLTSAVDSKIRES--FGSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        85 e~~~~~~L~~~~~~--~~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      ||+++|+|..++..  ...+++..++.++.|++.|++|||+.++
T Consensus        91 Ey~~~g~l~~~~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~i  134 (285)
T d1fmka3          91 EYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNY  134 (285)
T ss_dssp             CCCTTCBHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred             EecCCCchhhhhhhcccccchHHHHHHHHHHHHHHHHHHhhhhe
Confidence            99999998877753  3579999999999999999999998764

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.92  E-value=3.5e-24  Score=137.52  Aligned_cols=121  Identities=11%  Similarity=0.043  Sum_probs=102.3

Q ss_pred             ccccceeeccCccceeEEEEEEc-----cCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCe
Q psy8006           5 KNIISSIINDMGKYATVRRCRDR-----KNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHD   79 (126)
Q Consensus         5 ~~~~~~~~lg~g~~~~v~~~~~~-----~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~   79 (126)
                      +.|...+.||+|+||.||+|...     .++..+|+|.++.... ......+.+|+.++.++.+||||+++++.+..+..
T Consensus        23 ~~~~l~~~iG~G~fg~Vy~a~~~~~~~~~~~~~vAvK~i~~~~~-~~~~~~~~~E~~~~~~l~~HpnIv~~~g~~~~~~~  101 (311)
T d1t46a_          23 NRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAH-LTEREALMSELKVLSYLGNHMNIVNLLGACTIGGP  101 (311)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCC-HHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSS
T ss_pred             HHeEEeeEEeecCCeEEEEEEEeccccCCCCeEEEEEEECcccC-HHHHHHHHHHHHHHHhccCCCCEEEEEEEEeeCCE
Confidence            45666889999999999999863     4566899999986543 33345689999999999644999999999999999


Q ss_pred             EEEEEeccCcccHHHHHHhcC------------------CCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          80 MILLLELLTSAVDSKIRESFG------------------SKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        80 ~~lv~e~~~~~~L~~~~~~~~------------------~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      .+++|||+++|+|.+++....                  .+++..+..++.|++.|++|||+.++
T Consensus       102 ~~lvmE~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~gl~~LH~~~i  166 (311)
T d1t46a_         102 TLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNC  166 (311)
T ss_dssp             CEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred             EEEEEEcCCCCCHHHHHHhccccccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhCCe
Confidence            999999999999999886432                  58999999999999999999998764

>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Glycogen synthase kinase-3 beta (Gsk3b)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.92  E-value=3.3e-24  Score=139.60  Aligned_cols=114  Identities=17%  Similarity=0.172  Sum_probs=95.0

Q ss_pred             cccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeC------Ce
Q psy8006           6 NIISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESS------HD   79 (126)
Q Consensus         6 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~------~~   79 (126)
                      .|...++||+|+||+||+|.+..+++.||+|++......      ..+|+.++++++| |||+++++++...      .+
T Consensus        21 ~Y~~~k~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~------~~~Ei~il~~l~h-~niv~~~~~~~~~~~~~~~~~   93 (350)
T d1q5ka_          21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRF------KNRELQIMRKLDH-CNIVRLRYFFYSSGEKKDEVY   93 (350)
T ss_dssp             EEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSSS------CCHHHHHHHHCCC-TTBCCEEEEEEEC--CCSCCE
T ss_pred             CcEeeeEEeeCcCeEEEEEEECCCCCEEEEEEECccchH------HHHHHHHHHhcCC-CCCCcEEEEEEecCccCCceE
Confidence            467788999999999999999999999999999765422      3479999999998 9999999998543      35


Q ss_pred             EEEEEeccCcccHHHHH---HhcCCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          80 MILLLELLTSAVDSKIR---ESFGSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        80 ~~lv~e~~~~~~L~~~~---~~~~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      +|+||||++++.+..+.   .....+++..++.++.|++.||+|||+.++
T Consensus        94 ~~lv~Ey~~~~~~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~yLH~~~I  143 (350)
T d1q5ka_          94 LNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGI  143 (350)
T ss_dssp             EEEEEECCSEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTTTE
T ss_pred             EEEEEeccCCccHHHHHhhhhccCCCCHHHHHHHHHHHHHHHHHHHhcCC
Confidence            89999999988443332   344579999999999999999999999764

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.92  E-value=9.4e-25  Score=137.25  Aligned_cols=116  Identities=16%  Similarity=0.138  Sum_probs=97.2

Q ss_pred             cccccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeE-eCCeEEE
Q psy8006           4 IKNIISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFE-SSHDMIL   82 (126)
Q Consensus         4 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~-~~~~~~l   82 (126)
                      .++|...+.||+|+||.||+|...  +..||+|.++...    ..+.+.+|+.++++++| |||+++++++. .++.+|+
T Consensus         6 ~~~~~~~~~lG~G~fg~Vy~~~~~--~~~vAvK~i~~~~----~~~~~~~E~~~l~~l~H-pnIv~~~g~~~~~~~~~~l   78 (262)
T d1byga_           6 MKELKLLQTIGKGEFGDVMLGDYR--GNKVAVKCIKNDA----TAQAFLAEASVMTQLRH-SNLVQLLGVIVEEKGGLYI   78 (262)
T ss_dssp             GGGEEEEEEEEECSSCEEEEEEET--TEEEEEEECCCCC------HHHHHTHHHHTTCCC-TTBCCEEEEECCC--CCEE
T ss_pred             HHHeEEeEEEecCCCeEEEEEEEC--CeEEEEEEECcHH----HHHHHHHHHHHHHhCCC-CCEeeEEEEEEecCCcEEE
Confidence            456777889999999999999874  6789999996532    24468999999999998 99999999885 4566899


Q ss_pred             EEeccCcccHHHHHHhc--CCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          83 LLELLTSAVDSKIRESF--GSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        83 v~e~~~~~~L~~~~~~~--~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      ||||+++|+|.+++..+  ..+++..++.++.|++.|+.|||+.++
T Consensus        79 v~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~al~ylH~~~i  124 (262)
T d1byga_          79 VTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNF  124 (262)
T ss_dssp             EECCCTTEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred             EEeccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHhhccccccCce
Confidence            99999999999998643  358999999999999999999998764

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.91  E-value=6.2e-24  Score=134.17  Aligned_cols=119  Identities=14%  Similarity=0.073  Sum_probs=99.5

Q ss_pred             ccccceeeccCccceeEEEEEEccCC---cEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeEE
Q psy8006           5 KNIISSIINDMGKYATVRRCRDRKNG---TQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMI   81 (126)
Q Consensus         5 ~~~~~~~~lg~g~~~~v~~~~~~~~~---~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~~   81 (126)
                      ++|...+.||+|+||.||+|.+..++   ..+|+|.++... .......+.+|+.++++++| |||+++++++. .+..|
T Consensus         7 ~~~~l~~~iG~G~fg~Vy~a~~~~~~~~~~~vaik~~~~~~-~~~~~~~~~~E~~~l~~l~H-pnIv~l~~~~~-~~~~~   83 (273)
T d1mp8a_           7 ERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCT-SDSVREKFLQEALTMRQFDH-PHIVKLIGVIT-ENPVW   83 (273)
T ss_dssp             GGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTT-SHHHHHHHHHHHHHHHTCCC-TTBCCEEEEEC-SSSCE
T ss_pred             HHeEEEEEEeeCCCcEEEEEEEecCCceeEEEEEEEecccc-CHHHHHHHHHHHHHHHhCCC-CCEeeEEEEEe-cCeEE
Confidence            46778899999999999999986543   468888886543 23334569999999999998 99999999885 56789


Q ss_pred             EEEeccCcccHHHHHHh-cCCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          82 LLLELLTSAVDSKIRES-FGSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        82 lv~e~~~~~~L~~~~~~-~~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      +||||+++|++.+++.. ...+++..++.++.|+++|++|||+.++
T Consensus        84 iv~E~~~~g~l~~~~~~~~~~l~~~~~~~~~~qi~~gl~ylH~~~i  129 (273)
T d1mp8a_          84 IIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRF  129 (273)
T ss_dssp             EEEECCTTEEHHHHHHHTTTTSCHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred             EEEEeccCCcHHhhhhccCCCCCHHHHHHHHHHHHHHhhhhcccCe
Confidence            99999999999887654 4579999999999999999999999764

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.91  E-value=8.2e-24  Score=135.15  Aligned_cols=121  Identities=11%  Similarity=0.125  Sum_probs=97.3

Q ss_pred             ccccceeeccCccceeEEEEEEccCC-------cEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeC
Q psy8006           5 KNIISSIINDMGKYATVRRCRDRKNG-------TQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESS   77 (126)
Q Consensus         5 ~~~~~~~~lg~g~~~~v~~~~~~~~~-------~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~   77 (126)
                      +.|...+.||+|+||.||+|.+..++       ..||+|.+..... ......+.+|...+.++.+||||+++++++..+
T Consensus        13 ~~~~l~~~iG~G~fg~Vy~~~~~~~~~~~~~~~~~vAvK~~~~~~~-~~~~~~~~~e~~~l~~~~~HpnIv~~~~~~~~~   91 (299)
T d1fgka_          13 DRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDAT-EKDLSDLISEMEMMKMIGKHKNIINLLGACTQD   91 (299)
T ss_dssp             GGEEEEEECC-----CEEEEEEECC----CCCEEEEEEECCCTTCC-HHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred             HHeEEeeEEeecCCcEEEEEEEcCCCcccccCceEEEEEEECcccC-hHHHHHHHHHHHHHHHhcCCCeEEecccccccC
Confidence            67778899999999999999875543       3799999976543 333456889999999995449999999999999


Q ss_pred             CeEEEEEeccCcccHHHHHHhc----------------CCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          78 HDMILLLELLTSAVDSKIRESF----------------GSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        78 ~~~~lv~e~~~~~~L~~~~~~~----------------~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      +..++||||+++|+|.+++..+                ..+++..+..++.|++.|++|||+.++
T Consensus        92 ~~~~~v~e~~~~g~l~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~ylH~~~i  156 (299)
T d1fgka_          92 GPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKC  156 (299)
T ss_dssp             SSCEEEECCCTTCBHHHHHHTTSCC------------CCCCCHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred             CeEEEEEEccCCCcHHHHHHhhcCCccccccccccCccccCCHHHHHHHHHHHHHHHHHhhhCCE
Confidence            9999999999999999998643                248999999999999999999999764

>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase Erk2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.91  E-value=9.2e-24  Score=137.24  Aligned_cols=118  Identities=16%  Similarity=0.155  Sum_probs=96.1

Q ss_pred             ccccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCC-----e
Q psy8006           5 KNIISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSH-----D   79 (126)
Q Consensus         5 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~-----~   79 (126)
                      ..|...+.||+|+||.||+|.+..+|..||+|+++.... ......+.+|+.++.+++| ||++++++++..+.     .
T Consensus         8 ~rY~~~~~LG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~-~~~~~~~~~Ei~il~~l~h-p~iv~~~~~~~~~~~~~~~~   85 (345)
T d1pmea_           8 PRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEH-QTYCQRTLREIKILLRFRH-ENIIGINDIIRAPTIEQMKD   85 (345)
T ss_dssp             TTEEEEEECC---CCCEEEEEETTTCSEEEEEEECCTTC-HHHHHHHHHHHHHHHHCCC-TTBCCCCEEECCSSTTTCCC
T ss_pred             CCeEEEEEEeeccCeEEEEEEECCCCcEEEEEEEehhcC-hHHHHHHHHHHHHHHHcCC-CCCCcEEEEEeeccccccce
Confidence            347788999999999999999999999999999976432 3334568999999999998 99999999986543     3


Q ss_pred             EEEEEeccCcccHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          80 MILLLELLTSAVDSKIRESFGSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        80 ~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      .+++++ +.+++|.++++. ..+++..++.++.|++.|++|||+.++
T Consensus        86 ~~l~~~-~~~g~L~~~l~~-~~l~~~~i~~i~~qil~al~yLH~~~i  130 (345)
T d1pmea_          86 VYLVTH-LMGADLYKLLKT-QHLSNDHICYFLYQILRGLKYIHSANV  130 (345)
T ss_dssp             EEEEEE-CCCEEHHHHHHH-CCCCHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred             EEEEEe-ecCCchhhhhhc-CCCCHHHHHHHHHHHHHHHHHHHHCCC
Confidence            556555 667889999876 469999999999999999999999864

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.90  E-value=2.5e-23  Score=132.99  Aligned_cols=121  Identities=21%  Similarity=0.178  Sum_probs=103.5

Q ss_pred             cccccceeeccCccceeEEEEEEc-----cCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCC
Q psy8006           4 IKNIISSIINDMGKYATVRRCRDR-----KNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSH   78 (126)
Q Consensus         4 ~~~~~~~~~lg~g~~~~v~~~~~~-----~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~   78 (126)
                      -++|...+.||+|+||.||+|...     .++..||+|.+.... .......+.+|+.++.+++| ||++++++.+...+
T Consensus        12 ~~~~~~~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~i~~~~-~~~~~~~~~~E~~il~~l~h-~niv~~~~~~~~~~   89 (301)
T d1lufa_          12 RNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEA-SADMQADFQREAALMAEFDN-PNIVKLLGVCAVGK   89 (301)
T ss_dssp             GGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTC-CHHHHHHHHHHHHHHHTCCC-TTBCCEEEEECSSS
T ss_pred             HHHcEEeEEEeeCCCeEEEEEEECCCccCCCCeEEEEEEEChhc-ChHHHHHHHHHHHHHHhcCC-CCcccceeeeccCC
Confidence            457888899999999999999864     355789999997643 23345569999999999998 99999999999999


Q ss_pred             eEEEEEeccCcccHHHHHHhcC------------------------CCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          79 DMILLLELLTSAVDSKIRESFG------------------------SKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        79 ~~~lv~e~~~~~~L~~~~~~~~------------------------~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      ..+++||++++++|.+++....                        .++...+..++.|++.|++|||+.++
T Consensus        90 ~~~~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~ylH~~~i  161 (301)
T d1lufa_          90 PMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSERKF  161 (301)
T ss_dssp             SCEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred             ceEEEEEecCCCcHHHHHHhcCccccccccccccchhhhccccCCCCCCHHHHHHHHHHHHHHhhhcccCCe
Confidence            9999999999999999886422                        48889999999999999999998764

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.90  E-value=8e-23  Score=131.18  Aligned_cols=115  Identities=10%  Similarity=0.042  Sum_probs=95.5

Q ss_pred             eeeccCccceeEEEEEEccCC---cEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEe-CCeEEEEEe
Q psy8006          10 SIINDMGKYATVRRCRDRKNG---TQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFES-SHDMILLLE   85 (126)
Q Consensus        10 ~~~lg~g~~~~v~~~~~~~~~---~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~-~~~~~lv~e   85 (126)
                      +++||+|+||+||+|.+..++   ..||||.++... .......+.+|+.++.+++| |||+++++++.. ++..++|||
T Consensus        32 ~~~iG~G~fg~Vyk~~~~~~~~~~~~vAvK~~~~~~-~~~~~~~~~~E~~~l~~l~H-pnIv~~~g~~~~~~~~~~lv~E  109 (311)
T d1r0pa_          32 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRIT-DIGEVSQFLTEGIIMKDFSH-PNVLSLLGICLRSEGSPLVVLP  109 (311)
T ss_dssp             EEEEEEETTEEEEEEEECC----CEEEEEEEECCCC-CHHHHHHHHHHHHHHHTCCC-TTBCCCCEEEEETTTEEEEEEE
T ss_pred             ceEEeecCCeEEEEEEEECCCCEEEEEEEEEECccc-CHHHHHHHHHHHHHHHhCCC-CCEeEEeEEEEecCCceEEEEE
Confidence            568999999999999986543   368999997532 33445679999999999998 999999998765 568999999


Q ss_pred             ccCcccHHHHHHhc-CCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          86 LLTSAVDSKIRESF-GSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        86 ~~~~~~L~~~~~~~-~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      |+++++|.+++... ..++...+..++.|++.|+.|||+.++
T Consensus       110 ~~~~g~l~~~~~~~~~~~~~~~~~~i~~qia~gL~~lH~~~i  151 (311)
T d1r0pa_         110 YMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKKF  151 (311)
T ss_dssp             CCTTCBHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred             EeecCchhhhhccccccchHHHHHHHHHHHHHhhhhhcccCc
Confidence            99999999888753 467788899999999999999998764

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.90  E-value=1.6e-22  Score=130.08  Aligned_cols=119  Identities=16%  Similarity=0.105  Sum_probs=95.6

Q ss_pred             ccccceeeccCccceeEEEEEEccCCc----EEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeE
Q psy8006           5 KNIISSIINDMGKYATVRRCRDRKNGT----QYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDM   80 (126)
Q Consensus         5 ~~~~~~~~lg~g~~~~v~~~~~~~~~~----~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~   80 (126)
                      .+|...+.||+|+||.||+|.+..+|.    .||+|.+..... ....+.+.+|+.++.+++| |||+++++++..+ ..
T Consensus         9 ~dy~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~H-pnIv~l~g~~~~~-~~   85 (317)
T d1xkka_           9 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATS-PKANKEILDEAYVMASVDN-PHVCRLLGICLTS-TV   85 (317)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEECC----CCEEEEEEEECC-----CTHHHHHHHHHHHHHCCC-TTBCCEEEEEESS-SE
T ss_pred             HHCEEeeEEecCCCeEEEEEEEcCCCCEEEEEEEEEEeccccC-HHHHHHHHHHHHHHHhCCC-CCEeeEEEEEecC-Ce
Confidence            457788999999999999999987775    578888865432 2335579999999999998 9999999999765 46


Q ss_pred             EEEEeccCcccHHHHHHh-cCCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          81 ILLLELLTSAVDSKIRES-FGSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        81 ~lv~e~~~~~~L~~~~~~-~~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      +++++++.+++|.+.+.. ...+++..+..++.|++.|++|||+.++
T Consensus        86 ~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~qi~~gl~yLH~~~i  132 (317)
T d1xkka_          86 QLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRL  132 (317)
T ss_dssp             EEEEECCTTCBHHHHHHHTSSSCCHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred             eEEEEeccCCcccccccccccCCCHHHHHHHHHHHHHHHHHHHHcCc
Confidence            778888988888776654 4579999999999999999999998764

>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.89  E-value=4.1e-23  Score=132.06  Aligned_cols=122  Identities=18%  Similarity=0.214  Sum_probs=97.1

Q ss_pred             cccccceeeccCccceeEEEEEEccC-CcEEEEEEeecCCCCchhHHHHHHHHHHHHHh---cCCCCceeeeeeeEe---
Q psy8006           4 IKNIISSIINDMGKYATVRRCRDRKN-GTQYAAKFLRKKRRSTDLKAEILHEVAVLEAC---RCNSRIVQLHQVFES---   76 (126)
Q Consensus         4 ~~~~~~~~~lg~g~~~~v~~~~~~~~-~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~---~~~~~iv~l~~~~~~---   76 (126)
                      .+.|...+.||+|+||.||+|.+..+ ++.||+|+++.............+|+.+++.+   +| |||+++++++..   
T Consensus         6 ~~~Y~i~~~LG~G~fg~V~~a~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~~l~~l~~~~H-pnIv~~~~~~~~~~~   84 (305)
T d1blxa_           6 DQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEH-PNVVRLFDVCTVSRT   84 (305)
T ss_dssp             GGTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCC-TTBCCEEEEEEEEEC
T ss_pred             cCCEEEEEEEecccCeEEEEEEEECCCCEEEEEEEEehhhccchHHHHHHHHHHHHHHHhhcCC-CCcceeeeeeccccc
Confidence            35688889999999999999999766 56799999987654333333567888888776   46 999999998853   


Q ss_pred             --CCeEEEEEeccCcccHHHHHH-hcCCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          77 --SHDMILLLELLTSAVDSKIRE-SFGSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        77 --~~~~~lv~e~~~~~~L~~~~~-~~~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                        ....+++||+++++.+..... ....+++..++.++.|++.|++|||+.++
T Consensus        85 ~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~i  137 (305)
T d1blxa_          85 DRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHRV  137 (305)
T ss_dssp             SSEEEEEEEEECCSCBHHHHHHHSCTTCSCHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred             ccCceEEEEEEeccCCchhhhhhccCCCCCHHHHHHHHHHHHHHHHHHHhCCE
Confidence              346899999999996644433 34579999999999999999999999874

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.89  E-value=3.9e-23  Score=130.51  Aligned_cols=120  Identities=16%  Similarity=0.096  Sum_probs=90.2

Q ss_pred             ccccceeeccCccceeEEEEEEccC-C--cEEEEEEeecCCCCc-hhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeE
Q psy8006           5 KNIISSIINDMGKYATVRRCRDRKN-G--TQYAAKFLRKKRRST-DLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDM   80 (126)
Q Consensus         5 ~~~~~~~~lg~g~~~~v~~~~~~~~-~--~~~aiK~~~~~~~~~-~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~   80 (126)
                      ++|...+.||+|+||.||+|..... +  ..||+|.+.+..... ...+.+.+|+.++.+++| |||+++++++.+ +..
T Consensus         8 ~d~~~~~~iG~G~fg~Vy~~~~~~~~~~~~~vAiK~l~~~~~~~~~~~~~~~~Ei~~l~~l~H-~nIv~~~g~~~~-~~~   85 (273)
T d1u46a_           8 KDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDH-RNLIRLYGVVLT-PPM   85 (273)
T ss_dssp             GGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCC-TTBCCEEEEECS-SSC
T ss_pred             HHeEEEEEEecCCCeEEEEEEEECCCCcEEEEEEEEEChhhcCCHHHHHHHHHHHHHHHhCCC-CCEEEEEEEEee-cch
Confidence            4577788999999999999986433 3  368999998765433 334569999999999988 999999999965 467


Q ss_pred             EEEEeccCcccHHHHHH-hcCCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          81 ILLLELLTSAVDSKIRE-SFGSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        81 ~lv~e~~~~~~L~~~~~-~~~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      ++||||++++++.+.+. +...+++..++.++.|++.|+.|||+.++
T Consensus        86 ~lv~e~~~~~~l~~~~~~~~~~l~~~~~~~~~~qi~~gl~ylH~~~i  132 (273)
T d1u46a_          86 KMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKRF  132 (273)
T ss_dssp             EEEEECCTTCBHHHHHHHHGGGSCHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred             heeeeeecCcchhhhhhcccCCCCHHHHHHHHHHHHHHHHHhhhCCE
Confidence            89999999999877664 34579999999999999999999998763

>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Vascular endothelial growth factor receptor 2 (kdr)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.89  E-value=1.3e-22  Score=129.47  Aligned_cols=121  Identities=11%  Similarity=0.030  Sum_probs=97.3

Q ss_pred             ccccceeeccCccceeEEEEEEcc-----CCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeC-C
Q psy8006           5 KNIISSIINDMGKYATVRRCRDRK-----NGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESS-H   78 (126)
Q Consensus         5 ~~~~~~~~lg~g~~~~v~~~~~~~-----~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~-~   78 (126)
                      ++|...+.||+|+||.||+|.+..     +++.||+|.+..... ......+.+|...+.++.||+||+.+++.+..+ .
T Consensus        13 ~~y~~~~~iG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~-~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~~~   91 (299)
T d1ywna1          13 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGAT-HSEHRALMSELKILIHIGHHLNVVNLLGACTKPGG   91 (299)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEEESTTSSSCEEEEEEEEC----C-HHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTS
T ss_pred             HHEEEeeEEeecCCeEEEEEEEcCCCcccCCeEEEEEEEccccC-cHHHHHHHHHHHHHHhhcCCCeEEEeeeeeccCCC
Confidence            567888999999999999998754     346899999875443 233456888999999998779999999887654 4


Q ss_pred             eEEEEEeccCcccHHHHHHhc----------------CCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          79 DMILLLELLTSAVDSKIRESF----------------GSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        79 ~~~lv~e~~~~~~L~~~~~~~----------------~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      .++++|||+++|+|.+++..+                ..+++..+..++.|+++|++|||+.++
T Consensus        92 ~~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~gl~ylH~~~i  155 (299)
T d1ywna1          92 PLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKC  155 (299)
T ss_dssp             CCEEEEECCTTCBHHHHHHHTGGGBCC-----------CBCHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred             eEEEEEEecCCCcHHHHHHhccccccccccchhhhhcccCCHHHHHHHHHHHHHHHHHHHhCCC
Confidence            689999999999999998642                248899999999999999999998764

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.89  E-value=1.9e-22  Score=128.72  Aligned_cols=117  Identities=13%  Similarity=0.061  Sum_probs=98.0

Q ss_pred             cccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeEEEEEe
Q psy8006           6 NIISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLLE   85 (126)
Q Consensus         6 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~~lv~e   85 (126)
                      .|...+.||+|+||.||+|.+..++..||+|++......    ..+.+|++++..++|+++++.+......++..++|||
T Consensus         8 rY~l~~~iG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~~----~~~~~E~~i~~~l~~~~~i~~~~~~~~~~~~~~ivme   83 (299)
T d1ckia_           8 RYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKH----PQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVME   83 (299)
T ss_dssp             TEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEESCTTS----CCHHHHHHHHHHSTTSTTCCCEEEEEEETTEEEEEEE
T ss_pred             EEEEeEEEeeCCCcEEEEEEECCCCCEEEEEEEchhccC----HHHHHHHHHHHHccCCCcccEEEEEEecCCEEEEEEE
Confidence            488889999999999999999999999999998765432    2477899999999985667777777788889999999


Q ss_pred             ccCcccHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          86 LLTSAVDSKIRESFGSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        86 ~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      +++++.+..+......+++..+..++.|++.|++|||+.++
T Consensus        84 ~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i  124 (299)
T d1ckia_          84 LLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSKNF  124 (299)
T ss_dssp             CCCCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred             EcCCchhhhhhhccCCCcHHHHHHHHHHHHHHHHHHHHCCe
Confidence            99777444444455689999999999999999999999764

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.89  E-value=8.9e-23  Score=130.81  Aligned_cols=120  Identities=19%  Similarity=0.206  Sum_probs=100.8

Q ss_pred             ccccceeeccCccceeEEEEEEcc-----CCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCe
Q psy8006           5 KNIISSIINDMGKYATVRRCRDRK-----NGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHD   79 (126)
Q Consensus         5 ~~~~~~~~lg~g~~~~v~~~~~~~-----~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~   79 (126)
                      ++|...+.||+|+||.||+|.+..     ++..||||.++... .......+.+|+.++++++| |||+++++.+...+.
T Consensus        20 ~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~VAvK~~~~~~-~~~~~~~~~~E~~il~~l~h-~nIv~~~~~~~~~~~   97 (308)
T d1p4oa_          20 EKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAA-SMRERIEFLNEASVMKEFNC-HHVVRLLGVVSQGQP   97 (308)
T ss_dssp             GGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTS-CHHHHHHHHHHHHHGGGCCC-TTBCCEEEEECSSSS
T ss_pred             HHeEEeeEEeeCCCeEEEEEEECCcccCCCCcEEEEEEECccc-ChHHHHHHHHHHHHHHHcCC-CCEeeeeeEEecCCc
Confidence            567778899999999999998753     35689999997543 23334468999999999998 999999999998899


Q ss_pred             EEEEEeccCcccHHHHHHhc----------CCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          80 MILLLELLTSAVDSKIRESF----------GSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        80 ~~lv~e~~~~~~L~~~~~~~----------~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      .++||||+++|+|.+++...          ..++...+..++.|+++|+.|||+.++
T Consensus        98 ~~lv~e~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~gl~~LH~~~i  154 (308)
T d1p4oa_          98 TLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNANKF  154 (308)
T ss_dssp             CEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred             eeEEEeecCCCCHHHHHHhcccccccccccCCCCHHHHHHHHHHHHHHHHHHhhCCe
Confidence            99999999999998887532          246888999999999999999998764

>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

Probab=99.88  E-value=1.1e-21  Score=124.98  Aligned_cols=117  Identities=12%  Similarity=0.073  Sum_probs=100.9

Q ss_pred             ccccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeEEEEE
Q psy8006           5 KNIISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLL   84 (126)
Q Consensus         5 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~~lv~   84 (126)
                      .+|...+.||+|+||.||+|.+..+++.+|+|++.......    .+.+|++.+..++|+++++.+++++..+...++||
T Consensus         5 ~~Y~i~~~iG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~~~----~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~~vm   80 (293)
T d1csna_           5 VHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRSDAP----QLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVLVI   80 (293)
T ss_dssp             TTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCTTSC----CHHHHHHHHHHTTTCTTCCCEEEEEEETTEEEEEE
T ss_pred             CceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEccccCcH----HHHHHHHHHHHhcCCCCCCEEEEEeecCCccEEEE
Confidence            35778899999999999999999999999999987643221    46788899999988799999999999999999999


Q ss_pred             eccCcccHHHHHHhc-CCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          85 ELLTSAVDSKIRESF-GSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        85 e~~~~~~L~~~~~~~-~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      |+++ ++|.+++... ..+++..+..++.|++.+++|||+.++
T Consensus        81 e~~~-~~l~~~~~~~~~~~~~~~~~~i~~q~~~~l~~lH~~gi  122 (293)
T d1csna_          81 DLLG-PSLEDLLDLCGRKFSVKTVAMAAKQMLARVQSIHEKSL  122 (293)
T ss_dssp             ECCC-CBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHTTTE
T ss_pred             EecC-CCHHHHHHhhccchhhHHHHHHHHHHHHHHHHHHHCCc
Confidence            9995 5587777654 479999999999999999999999874

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.87  E-value=2.3e-21  Score=123.91  Aligned_cols=111  Identities=13%  Similarity=0.112  Sum_probs=91.1

Q ss_pred             ccccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCchhHHHHHHHHH--HHHHhcCCCCceeeeeeeEeCC----
Q psy8006           5 KNIISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVA--VLEACRCNSRIVQLHQVFESSH----   78 (126)
Q Consensus         5 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~--~l~~~~~~~~iv~l~~~~~~~~----   78 (126)
                      +.|...+.||+|+||.||+|..  +|..||+|.++...     .....+|.+  .+..++| |||+++++.+...+    
T Consensus         3 ~~~~l~~~iG~G~fg~Vy~~~~--~g~~vAvK~~~~~~-----~~~~~~e~ei~~~~~~~H-pnIv~~~~~~~~~~~~~~   74 (303)
T d1vjya_           3 RTIVLQESIGKGRFGEVWRGKW--RGEEVAVKIFSSRE-----ERSWFREAEIYQTVMLRH-ENILGFIAADNKDNGTWT   74 (303)
T ss_dssp             GGEEEEEEEECCSSSEEEEEEE--TTEEEEEEEECGGG-----HHHHHHHHHHHTSTTCCC-TTBCCEEEEEEEECSSSE
T ss_pred             cEEEEEEEEeeCCCeEEEEEEE--CCEEEEEEEECccc-----hhHHHHHHHHHHHhhCCC-CcCcceEEEEEeCCCcce
Confidence            5678889999999999999986  57899999986532     223444544  4456677 99999999987543    


Q ss_pred             eEEEEEeccCcccHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhhcc
Q psy8006          79 DMILLLELLTSAVDSKIRESFGSKSESGVQNCLEPSISVFSSLSKF  124 (126)
Q Consensus        79 ~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~l~~~  124 (126)
                      ..|+||||+++|+|.+++++ ..++......++.|++.+++|||..
T Consensus        75 ~~~lv~Ey~~~g~L~~~l~~-~~l~~~~~~~~~~~ia~gl~~lH~~  119 (303)
T d1vjya_          75 QLWLVSDYHEHGSLFDYLNR-YTVTVEGMIKLALSTASGLAHLHME  119 (303)
T ss_dssp             EEEEEEECCTTCBHHHHHHH-CCBCHHHHHHHHHHHHHHHHHHHCC
T ss_pred             EEEEEEecccCCCHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHh
Confidence            68999999999999999986 4689999999999999999999964

>d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Sky1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.71  E-value=6.8e-17  Score=104.97  Aligned_cols=116  Identities=14%  Similarity=0.115  Sum_probs=88.2

Q ss_pred             ccceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcC----------CCCceeeeeeeEe
Q psy8006           7 IISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRC----------NSRIVQLHQVFES   76 (126)
Q Consensus         7 ~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~----------~~~iv~l~~~~~~   76 (126)
                      |...+.||+|+||.||+|++..+|..||+|+++...   .......+|+.+++.+.|          ++|++++++++..
T Consensus        15 Y~i~~~LG~G~fg~Vy~~~~~~~g~~vAvKvi~~~~---~~~~~~~~Ei~~l~~l~~~~~~~~~~~~~~~iv~~~~~~~~   91 (362)
T d1q8ya_          15 YILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDK---VYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFNH   91 (362)
T ss_dssp             EEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCH---HHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEEEE
T ss_pred             EEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeccc---cchHHHHHHHHHHHHhcchhhhhhhhcCcCceEEEEEEeee
Confidence            788999999999999999999999999999997642   223457788888887753          2789999888754


Q ss_pred             --CCeEEEEEeccCccc-HHHHH--HhcCCCCHHHHHHHHHHHHHHHHhhhc-cC
Q psy8006          77 --SHDMILLLELLTSAV-DSKIR--ESFGSKSESGVQNCLEPSISVFSSLSK-FE  125 (126)
Q Consensus        77 --~~~~~lv~e~~~~~~-L~~~~--~~~~~~~~~~~~~~~~qi~~~l~~l~~-~~  125 (126)
                        ....+++++++..+. .....  .....+++..+..++.|++.|++|||. .+
T Consensus        92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~qil~al~~lh~~~~  146 (362)
T d1q8ya_          92 KGPNGVHVVMVFEVLGENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHRRCG  146 (362)
T ss_dssp             EETTEEEEEEEECCCCEEHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred             ccccceeeeeeecccccccccccccccccCCcHHHHHHHHHHHHHHHHHHhhhcC
Confidence              345566666554432 22222  234579999999999999999999996 54

>d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: RIO1-like kinases
domain: Rio2 serine protein kinase C-terminal domain
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=99.61  E-value=2.3e-15  Score=89.98  Aligned_cols=105  Identities=12%  Similarity=0.064  Sum_probs=77.0

Q ss_pred             ceeeccCccceeEEEEEEccCCcEEEEEEeecCCCCc----------------hhHHHHHHHHHHHHHhcCCCCceeeee
Q psy8006           9 SSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRRST----------------DLKAEILHEVAVLEACRCNSRIVQLHQ   72 (126)
Q Consensus         9 ~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~----------------~~~~~~~~e~~~l~~~~~~~~iv~l~~   72 (126)
                      .++.||+|+||.||+|.+. +|..+|+|+++......                .......+|...+.++.+ ++++..++
T Consensus         4 vg~~IG~G~~g~Vy~a~~~-~g~~vAvKi~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~-~~v~~~~~   81 (191)
T d1zara2           4 IGKLMGEGKESAVFNCYSE-KFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQG-LAVPKVYA   81 (191)
T ss_dssp             EEEEEEECSSEEEEEEEET-TTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTTT-SSSCCEEE
T ss_pred             hCCEeeeCcceEEEEEECC-CCCEEEEEEEecccchhhhhhhhhhhccHHHHHHHHHHHHHHHHHHHHccC-CCcceEEE
Confidence            4789999999999999885 68899999887532210                011234567888888888 88887664


Q ss_pred             eeEeCCeEEEEEeccCcccHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhhccCC
Q psy8006          73 VFESSHDMILLLELLTSAVDSKIRESFGSKSESGVQNCLEPSISVFSSLSKFET  126 (126)
Q Consensus        73 ~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~l~~~~~  126 (126)
                      ..  .  .+++||+++++.+.+       ++...+..++.|++.++.|||+.++
T Consensus        82 ~~--~--~~lvme~~~~~~~~~-------l~~~~~~~i~~ql~~~l~~lH~~gi  124 (191)
T d1zara2          82 WE--G--NAVLMELIDAKELYR-------VRVENPDEVLDMILEEVAKFYHRGI  124 (191)
T ss_dssp             EE--T--TEEEEECCCCEEGGG-------CCCSCHHHHHHHHHHHHHHHHHTTE
T ss_pred             ec--C--CEEEEEeeccccccc-------hhhHHHHHHHHHHHHHHHHHhhCCE
Confidence            42  2  368999999876432       4555677899999999999998764

>d1j7la_ d.144.1.6 (A:) Type IIIa 3',5"-aminoglycoside phosphotransferase {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Type IIIa 3',5"-aminoglycoside phosphotransferase
species: Enterococcus faecalis [TaxId: 1351]

Probab=97.78  E-value=0.00049  Score=41.56  Aligned_cols=101  Identities=11%  Similarity=0.031  Sum_probs=65.9

Q ss_pred             ccceeEEEEEEccCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCCCCceeeeeeeEeCCeEEEEEeccCcccHHHH
Q psy8006          16 GKYATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCNSRIVQLHQVFESSHDMILLLELLTSAVDSKI   95 (126)
Q Consensus        16 g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~l~~~~~~~~~~~lv~e~~~~~~L~~~   95 (126)
                      ++.+.||+..  ..+..+.+|.........  ...+.+|...+..+...-.+.++......++..++||++.++.++...
T Consensus        25 ~s~~~v~rv~--~~~~~~vlk~~~~~~~~~--~~~~~~E~~~l~~l~~~vpvP~vl~~~~~~~~~~lv~~~l~G~~~~~~  100 (263)
T d1j7la_          25 MSPAKVYKLV--GENENLYLKMTDSRYKGT--TYDVEREKDMMLWLEGKLPVPKVLHFERHDGWSNLLMSEADGVLCSEE  100 (263)
T ss_dssp             CSSSEEEEEE--CSSCEEEEEEECGGGTTS--TTCHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECCSSEEHHHH
T ss_pred             CCCCcEEEEE--eCCCeEEEEEcCCCcccc--hhhHHHHHHHHHHHhccCCCCcEEEEEecCCceEEEEEeccccccccc
Confidence            4446788764  345567888776543211  124677888887775423456677777778889999999999987654


Q ss_pred             HHhcCCCCHHHHHHHHHHHHHHHHhhhccC
Q psy8006          96 RESFGSKSESGVQNCLEPSISVFSSLSKFE  125 (126)
Q Consensus        96 ~~~~~~~~~~~~~~~~~qi~~~l~~l~~~~  125 (126)
                      ...     ......+..++...++.||+..
T Consensus       101 ~~~-----~~~~~~~~~~l~~~l~~lH~~~  125 (263)
T d1j7la_         101 YED-----EQSPEKIIELYAECIRLFHSID  125 (263)
T ss_dssp             TTT-----CSCHHHHHHHHHHHHHHHHTSC
T ss_pred             ccc-----cccHHHHHHHHHHHHHHHhccC
Confidence            332     1223446677888888888753

>d2pula1 d.144.1.6 (A:5-396) Methylthioribose kinase MtnK {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Methylthioribose kinase MtnK
species: Bacillus subtilis [TaxId: 1423]

Probab=97.10  E-value=0.0055  Score=39.38  Aligned_cols=113  Identities=12%  Similarity=-0.069  Sum_probs=63.1

Q ss_pred             cceeeccCccceeEEEEEEccCCcEEEEEEeecCCC--C---chhHHHHHHHHHHHHHhcCC-C-CceeeeeeeEeCCeE
Q psy8006           8 ISSIINDMGKYATVRRCRDRKNGTQYAAKFLRKKRR--S---TDLKAEILHEVAVLEACRCN-S-RIVQLHQVFESSHDM   80 (126)
Q Consensus         8 ~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~--~---~~~~~~~~~e~~~l~~~~~~-~-~iv~l~~~~~~~~~~   80 (126)
                      +..+.+|.|....||+..+...++.+++|.-.+...  +   +....+..+|.+.+..+... | .+++++.  .+++..
T Consensus        29 l~~~eig~G~~N~vfrV~~~~~~~svivKqa~p~~r~~g~~~~~~~~R~~~E~~~L~~~~~~~p~~vP~v~~--~d~~~~  106 (392)
T d2pula1          29 LTCQEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFY--SDTEMA  106 (392)
T ss_dssp             CEEEECCSSSSEEEEEEEC----CEEEEEEECCGGGC--CCCCCCTTHHHHHHHHHHHHHTTCGGGSCCEEE--EETTTT
T ss_pred             eeEEEeCCCceEeEEEEEeCCCCeEEEEecCCchhcccCCCCCCCHHHHHHHHHHHHHhhhhCCCCcceEEE--EcCCCC
Confidence            345678999999999998877788899996554211  1   11122455688888776431 2 2334443  244556


Q ss_pred             EEEEeccCcccH-HHHHHhcCCCCHHHHHHHHHHHHHHHHhhhc
Q psy8006          81 ILLLELLTSAVD-SKIRESFGSKSESGVQNCLEPSISVFSSLSK  123 (126)
Q Consensus        81 ~lv~e~~~~~~L-~~~~~~~~~~~~~~~~~~~~qi~~~l~~l~~  123 (126)
                      +++||++++... ...+.. .......+..+...+.......|.
T Consensus       107 ~lvmE~L~~~~~~~~~l~~-~~~~~~~a~~lg~~La~~h~~~~~  149 (392)
T d2pula1         107 VTVMEDLSHLKIARKGLIE-GENYPHLSQHIGEFLGKTLFYSSD  149 (392)
T ss_dssp             EEEECCCTTSEEHHHHHHH-TCCCTTHHHHHHHHHHHHHHHTST
T ss_pred             EEEEeccCCcccchhhhcc-cchhHHHHHHHHHHHHHHHHHhcc
Confidence            789999987654 333332 223334445555555555555554

>d1nd4a_ d.144.1.6 (A:) Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase) {Bacteria (Klebsiella pneumoniae) [TaxId: 573]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase)
species: Bacteria (Klebsiella pneumoniae) [TaxId: 573]

Probab=96.69  E-value=0.014  Score=34.65  Aligned_cols=99  Identities=14%  Similarity=0.024  Sum_probs=61.9

Q ss_pred             eccCccc-eeEEEEEEccCCcEEEEEEeecCCCCchhHHHHHHHHHHHHHhcCC-CCceeeeeeeEeCCeEEEEEeccCc
Q psy8006          12 INDMGKY-ATVRRCRDRKNGTQYAAKFLRKKRRSTDLKAEILHEVAVLEACRCN-SRIVQLHQVFESSHDMILLLELLTS   89 (126)
Q Consensus        12 ~lg~g~~-~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~~~~~-~~iv~l~~~~~~~~~~~lv~e~~~~   89 (126)
                      .+..|.. +.||+... ..+..+.+|........     .+..|...++.+... -.+.+++.....++..+++|+++++
T Consensus        17 ~~~~G~s~~~v~r~~~-~~~~~~vlK~~~~~~~~-----~l~~E~~~l~~L~~~gvpvP~v~~~~~~~~~~~~v~~~i~G   90 (255)
T d1nd4a_          17 QQTIGCSDAAVFRLSA-QGRPVLFVKTDLSGALN-----ELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLLLGEVPG   90 (255)
T ss_dssp             ECSCTTSSCEEEEEEC-TTSCCEEEEEECSCTTS-----CHHHHHHHHHHHHTTTCCBCCEEEEEECSSCEEEEEECCSS
T ss_pred             EcCCcccCCeEEEEEe-CCCCEEEEEeCCccCHh-----HHHHHHHHHHHHHhcCCCCCceeeecccccceEEEEEeeec
Confidence            3444443 56787764 44666788876554322     356677777766541 2355667777777889999999998


Q ss_pred             ccHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhhcc
Q psy8006          90 AVDSKIRESFGSKSESGVQNCLEPSISVFSSLSKF  124 (126)
Q Consensus        90 ~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~l~~~  124 (126)
                      .++..     ...+..   ....++...++.||..
T Consensus        91 ~~~~~-----~~~~~~---~~~~~l~~~la~LH~~  117 (255)
T d1nd4a_          91 QDLLS-----SHLAPA---EKVSIMADAMRRLHTL  117 (255)
T ss_dssp             EETTT-----SCCCHH---HHHHHHHHHHHHHTTS
T ss_pred             ccccc-----ccccHH---HHHHHHHHHHHHHccC
Confidence            87532     122322   2345677788888864