Psyllid ID: psy8010

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80-------
Protein Sequence
MTNFIITLVARIPRLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDVDVREILGTPDYVGE
Secondary Structure (PSIPRED)
cHHHHHHHccccHHHHHHHHHHHHHHHHHHHcccccEEEcccccccEEEccccccccEEEEEccccEEEccccEEEEEccccccccc
Secondary Structure Prediction (SSPRO)
cccEEEEHHHHHHHHHHHHHHHHHHHHcHHHHccccEEEcccccccEEEEcccccccEEEEcccHHHHHcccHHHHHHcccHHHHcc
Coil and Loop (DISEMBL)
MTNFIITLVARIPRLVAKVTVTLLGslnhhftsthslyrscsqpqnlvltgeypdcdvklcdfgisrhlsrdvdvreilgtpdyvge
Flexible Loop (DISEMBL)
MTNFIITLVARIPRLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFgisrhlsrdvdvreilgtpdyvge
Low Complexity Region (SEG)
MTNFIITLVARIPRLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDVDVREILGTPDYVGE
Disordered region (IsUnstruct)
**NFIITLVARIPRLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDVDVREILGT******
Disordered Region (DISOPRED)
*TNFIITLVARIPRLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDVDVREILGTPDYVGE
Disordered Region (DISEMBL)
MTNFIITLVARIPRLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDVDVREILGTPDYVGE
Disordered Region (DISPRO)
*TNFIITLVARIPRLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDVDVREILGTPDYV*E
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
oooooooooooooooooohhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MTNFIITLVARIPRLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDVDVREILGTPDYVGE
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	87	2.2.26 [Sep-21-2011]
Q9GM70	397	Serine/threonine-protein	yes	N/A	0.655	0.143	0.456	3e-09
Q9UEE5	414	Serine/threonine-protein	yes	N/A	0.655	0.137	0.456	1e-08
Q0KHT7	784	Probable serine/threonine	no	N/A	0.505	0.056	0.545	8e-08
Q8BG48	372	Serine/threonine-protein	yes	N/A	0.505	0.118	0.454	8e-07
O94768	372	Serine/threonine-protein	no	N/A	0.505	0.118	0.454	8e-07
Q91XS8	371	Serine/threonine-protein	yes	N/A	0.505	0.118	0.454	9e-07
O94806	890	Serine/threonine-protein	no	N/A	0.850	0.083	0.329	0.0002
Q8K1Y2	889	Serine/threonine-protein	no	N/A	0.850	0.083	0.329	0.0002
Q9WTQ1	918	Serine/threonine-protein	no	N/A	0.850	0.080	0.329	0.0004
Q15139	912	Serine/threonine-protein	no	N/A	0.850	0.081	0.329	0.0009

>sp|Q9GM70|ST17A_RABIT Serine/threonine-protein kinase 17A OS=Oryctolagus cuniculus GN=STK17A PE=2 SV=1

 Score = 60.5 bits (145), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 26/57 (45%), Positives = 38/57 (66%)

Query: 30  HFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDVDVREILGTPDYVG 86
           HF  TH +     +PQN++LT E P  D+K+ DFG+SR +    ++REI+GTP+YV 
Sbjct: 158 HFLHTHDVVHLDLKPQNILLTSESPLGDIKIVDFGLSRIVKNSEELREIMGTPEYVA 214

Acts as a positive regulator of apoptosis. May also act as a regulator of cellular reactive oxygen species.
Oryctolagus cuniculus (taxid: 9986)
EC: 2EC: .EC: 7EC: .EC: 1EC: 1EC: .EC: 1

>sp|Q9UEE5|ST17A_HUMAN Serine/threonine-protein kinase 17A OS=Homo sapiens GN=STK17A PE=1 SV=2

 Score = 58.5 bits (140), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 26/57 (45%), Positives = 37/57 (64%)

Query: 30  HFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDVDVREILGTPDYVG 86
           HF  T  +     +PQN++LT E P  D+K+ DFG+SR L    ++REI+GTP+YV 
Sbjct: 175 HFLHTRDVVHLDLKPQNILLTSESPLGDIKIVDFGLSRILKNSEELREIMGTPEYVA 231

Acts as a positive regulator of apoptosis. Also acts as a regulator of cellular reactive oxygen species.

Homo sapiens (taxid: 9606)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q0KHT7|Y2666_DROME Probable serine/threonine-protein kinase CG32666 OS=Drosophila melanogaster GN=CG32666 PE=1 SV=1

 Score = 55.8 bits (133), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 24/44 (54%), Positives = 33/44 (75%)

Query: 43  QPQNLVLTGEYPDCDVKLCDFGISRHLSRDVDVREILGTPDYVG 86
           +PQN++L GE  +  +KLCDFGISR +   ++VRE+ GTPDYV 
Sbjct: 162 KPQNILLAGERIEDGLKLCDFGISRVVCEGINVREMAGTPDYVA 205

Drosophila melanogaster (taxid: 7227)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q8BG48|ST17B_MOUSE Serine/threonine-protein kinase 17B OS=Mus musculus GN=Stk17b PE=2 SV=1

 Score = 52.4 bits (124), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 20/44 (45%), Positives = 33/44 (75%)

Query: 43  QPQNLVLTGEYPDCDVKLCDFGISRHLSRDVDVREILGTPDYVG 86
           +PQN++L+  YP  D+K+ DFG+SR +    ++REI+GTP+Y+ 
Sbjct: 160 KPQNILLSSIYPLGDIKIVDFGMSRKIGNASELREIMGTPEYLA 203

Acts as a positive regulator of apoptosis.

Mus musculus (taxid: 10090)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|O94768|ST17B_HUMAN Serine/threonine-protein kinase 17B OS=Homo sapiens GN=STK17B PE=1 SV=1

 Score = 52.4 bits (124), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 20/44 (45%), Positives = 33/44 (75%)

Query: 43  QPQNLVLTGEYPDCDVKLCDFGISRHLSRDVDVREILGTPDYVG 86
           +PQN++L+  YP  D+K+ DFG+SR +    ++REI+GTP+Y+ 
Sbjct: 160 KPQNILLSSIYPLGDIKIVDFGMSRKIGHACELREIMGTPEYLA 203

Acts as a positive regulator of apoptosis.

Homo sapiens (taxid: 9606)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q91XS8|ST17B_RAT Serine/threonine-protein kinase 17B OS=Rattus norvegicus GN=Stk17b PE=1 SV=1

 Score = 52.4 bits (124), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 20/44 (45%), Positives = 33/44 (75%)

Query: 43  QPQNLVLTGEYPDCDVKLCDFGISRHLSRDVDVREILGTPDYVG 86
           +PQN++L+  YP  D+K+ DFG+SR +    ++REI+GTP+Y+ 
Sbjct: 160 KPQNILLSSIYPLGDIKIVDFGMSRKIGNASELREIMGTPEYLA 203

Acts as a positive regulator of apoptosis.

Rattus norvegicus (taxid: 10116)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|O94806|KPCD3_HUMAN Serine/threonine-protein kinase D3 OS=Homo sapiens GN=PRKD3 PE=1 SV=1

 Score = 44.3 bits (103), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 26/79 (32%), Positives = 41/79 (51%), Gaps = 5/79 (6%)

Query: 10  ARIPRLVAKVTVT--LLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISR 67
           +R+P  + K  VT  L+   N HF +   +     +P+N++L    P   VKLCDFG +R
Sbjct: 669 SRLPERITKFMVTQILVALRNLHFKN---IVHCDLKPENVLLASAEPFPQVKLCDFGFAR 725

Query: 68  HLSRDVDVREILGTPDYVG 86
            +      R ++GTP Y+ 
Sbjct: 726 IIGEKSFRRSVVGTPAYLA 744

Converts transient diacylglycerol (DAG) signals into prolonged physiological effects, downstream of PKC. Involved in resistance to oxidative stress.

Homo sapiens (taxid: 9606)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

EC: 3

>sp|Q8K1Y2|KPCD3_MOUSE Serine/threonine-protein kinase D3 OS=Mus musculus GN=Prkd3 PE=1 SV=1

 Score = 44.3 bits (103), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 26/79 (32%), Positives = 41/79 (51%), Gaps = 5/79 (6%)

Query: 10  ARIPRLVAKVTVT--LLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISR 67
           +R+P  + K  VT  L+   N HF +   +     +P+N++L    P   VKLCDFG +R
Sbjct: 668 SRLPERITKFMVTQILVALRNLHFKN---IVHCDLKPENVLLASAEPFPQVKLCDFGFAR 724

Query: 68  HLSRDVDVREILGTPDYVG 86
            +      R ++GTP Y+ 
Sbjct: 725 IIGEKSFRRSVVGTPAYLA 743

Converts transient diacylglycerol (DAG) signals into prolonged physiological effects, downstream of PKC. Involved in resistance to oxidative stress.

Mus musculus (taxid: 10090)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

EC: 3

>sp|Q9WTQ1|KPCD1_RAT Serine/threonine-protein kinase D1 OS=Rattus norvegicus GN=Prkd1 PE=1 SV=2

 Score = 43.5 bits (101), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 26/79 (32%), Positives = 42/79 (53%), Gaps = 5/79 (6%)

Query: 10  ARIPRLVAKVTVT-LLGSLNH-HFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISR 67
            R+P  + K  +T +L +L H HF +   +     +P+N++L    P   VKLCDFG +R
Sbjct: 682 GRLPEHITKFLITQILVALRHLHFKN---IVHCDLKPENVLLASADPFPQVKLCDFGFAR 738

Query: 68  HLSRDVDVREILGTPDYVG 86
            +      R ++GTP Y+ 
Sbjct: 739 IIGEKSFRRSVVGTPAYLA 757

Serine/threonine-protein kinase that converts transient diacylglycerol (DAG) signals into prolonged physiological effects downstream of PKC, and is involved in the regulation of MAPK8/JNK1 and Ras signaling, Golgi membrane integrity and trafficking, cell survival through NF-kappa-B activation, cell migration, cell differentiation by mediating HDAC7 nuclear export, cell proliferation via MAPK1/3 (ERK1/2) signaling, and plays a role in cardiac hypertrophy, VEGFA-induced angiogenesis, genotoxic-induced apoptosis and flagellin-stimulated inflammatory response. Phosphorylates the epidermal growth factor receptor (EGFR) on dual threonine residues, which leads to the suppression of epidermal growth factor (EGF)-induced MAPK8/JNK1 activation and subsequent JUN phosphorylation. Phosphorylates RIN1, inducing RIN1 binding to 14-3-3 proteins YWHAB, YWHAE and YWHAZ and increased competition with RAF1 for binding to GTP-bound form of Ras proteins (NRAS, HRAS and KRAS). Acts downstream of the heterotrimeric G-protein beta/gamma-subunit complex to maintain the structural integrity of the Golgi membranes, and is required for protein transport along the secretory pathway. In the trans-Golgi network (TGN), regulates the fission of transport vesicles that are on their way to the plasma membrane. May act by activating the lipid kinase phosphatidylinositol 4-kinase beta (PI4KB) at the TGN for the local synthesis of phosphorylated inositol lipids, which induces a sequential production of DAG, phosphatidic acid (PA) and lyso-PA (LPA) that are necessary for membrane fission and generation of specific transport carriers to the cell surface. Under oxidative stress, is phosphorylated at Tyr-469 via SRC-ABL1 and contributes to cell survival by activating IKK complex and subsequent nuclear translocation and activation of NFKB1. Involved in cell migration by regulating integrin alpha-5/beta-3 recycling and promoting its recruitment in newly forming focal adhesion. In osteoblast differentiation, mediates the bone morphogenic protein 2 (BMP2)-induced nuclear export of HDAC7, which results in the inhibition of HDAC7 transcriptional repression of RUNX2. In neurons, plays an important role in neuronal polarity by regulating the biogenesis of TGN-derived dendritic vesicles, and is involved in the maintenance of dendritic arborization and Golgi structure in hippocampal cells. May potentiate mitogenesis induced by the neuropeptide bombesin or vasopressin by mediating an increase in the duration of MAPK1/3 (ERK1/2) signaling, which leads to accumulation of immediate-early gene products including FOS that stimulate cell cycle progression. Plays an important role in the proliferative response induced by low calcium in keratinocytes, through sustained activation of MAPK1/3 (ERK1/2) pathway. Downstream of novel PKC signaling, plays a role in cardiac hypertrophy by phosphorylating HDAC5, which in turn triggers XPO1/CRM1-dependent nuclear export of HDAC5, MEF2A transcriptional activation and induction of downstream target genes that promote myocyte hypertrophy and pathological cardiac remodeling. Mediates cardiac troponin I (TNNI3) phosphorylation at the PKA sites, which results in reduced myofilament calcium sensitivity, and accelerated crossbridge cycling kinetics. The PRKD1-HDAC5 pathway is also involved in angiogenesis by mediating VEGFA-induced specific subset of gene expression, cell migration, and tube formation. In response to VEGFA, is necessary and required for HDAC7 phosphorylation which induces HDAC7 nuclear export and endothelial cell proliferation and migration. During apoptosis induced by cytarabine and other genotoxic agents, PRKD1 is cleaved by caspase-3 at Asp-378, resulting in activation of its kinase function and increased sensitivity of cells to the cytotoxic effects of genotoxic agents. In epithelial cells, is required for transducing flagellin-stimulated inflammatory responses by binding and phosphorylating TLR5, which contributes to MAPK14/p38 activation and production of inflammatory cytokines. May play a role in inflammatory response by mediating activation of NF-kappa-B. May be involved in pain transmission by directly modulating TRPV1 receptor.

Rattus norvegicus (taxid: 10116)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

EC: 3

>sp|Q15139|KPCD1_HUMAN Serine/threonine-protein kinase D1 OS=Homo sapiens GN=PRKD1 PE=1 SV=2

 Score = 42.4 bits (98), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 26/79 (32%), Positives = 42/79 (53%), Gaps = 5/79 (6%)

Query: 10  ARIPRLVAKVTVT-LLGSLNH-HFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISR 67
            R+P  + K  +T +L +L H HF +   +     +P+N++L    P   VKLCDFG +R
Sbjct: 676 GRLPEHITKFLITQILVALRHLHFKN---IVHCDLKPENVLLASADPFPQVKLCDFGFAR 732

Query: 68  HLSRDVDVREILGTPDYVG 86
            +      R ++GTP Y+ 
Sbjct: 733 IIGEKSFRRSVVGTPAYLA 751

Serine/threonine-protein kinase that converts transient diacylglycerol (DAG) signals into prolonged physiological effects downstream of PKC, and is involved in the regulation of MAPK8/JNK1 and Ras signaling, Golgi membrane integrity and trafficking, cell survival through NF-kappa-B activation, cell migration, cell differentiation by mediating HDAC7 nuclear export, cell proliferation via MAPK1/3 (ERK1/2) signaling, and plays a role in cardiac hypertrophy, VEGFA-induced angiogenesis, genotoxic-induced apoptosis and flagellin-stimulated inflammatory response. Phosphorylates the epidermal growth factor receptor (EGFR) on dual threonine residues, which leads to the suppression of epidermal growth factor (EGF)-induced MAPK8/JNK1 activation and subsequent JUN phosphorylation. Phosphorylates RIN1, inducing RIN1 binding to 14-3-3 proteins YWHAB, YWHAE and YWHAZ and increased competition with RAF1 for binding to GTP-bound form of Ras proteins (NRAS, HRAS and KRAS). Acts downstream of the heterotrimeric G-protein beta/gamma-subunit complex to maintain the structural integrity of the Golgi membranes, and is required for protein transport along the secretory pathway. In the trans-Golgi network (TGN), regulates the fission of transport vesicles that are on their way to the plasma membrane. May act by activating the lipid kinase phosphatidylinositol 4-kinase beta (PI4KB) at the TGN for the local synthesis of phosphorylated inositol lipids, which induces a sequential production of DAG, phosphatidic acid (PA) and lyso-PA (LPA) that are necessary for membrane fission and generation of specific transport carriers to the cell surface. Under oxidative stress, is phosphorylated at Tyr-463 via SRC-ABL1 and contributes to cell survival by activating IKK complex and subsequent nuclear translocation and activation of NFKB1. Involved in cell migration by regulating integrin alpha-5/beta-3 recycling and promoting its recruitment in newly forming focal adhesion. In osteoblast differentiation, mediates the bone morphogenic protein 2 (BMP2)-induced nuclear export of HDAC7, which results in the inhibition of HDAC7 transcriptional repression of RUNX2. In neurons, plays an important role in neuronal polarity by regulating the biogenesis of TGN-derived dendritic vesicles, and is involved in the maintenance of dendritic arborization and Golgi structure in hippocampal cells. May potentiate mitogenesis induced by the neuropeptide bombesin or vasopressin by mediating an increase in the duration of MAPK1/3 (ERK1/2) signaling, which leads to accumulation of immediate-early gene products including FOS that stimulate cell cycle progression. Plays an important role in the proliferative response induced by low calcium in keratinocytes, through sustained activation of MAPK1/3 (ERK1/2) pathway. Downstream of novel PKC signaling, plays a role in cardiac hypertrophy by phosphorylating HDAC5, which in turn triggers XPO1/CRM1-dependent nuclear export of HDAC5, MEF2A transcriptional activation and induction of downstream target genes that promote myocyte hypertrophy and pathological cardiac remodeling. Mediates cardiac troponin I (TNNI3) phosphorylation at the PKA sites, which results in reduced myofilament calcium sensitivity, and accelerated crossbridge cycling kinetics. The PRKD1-HDAC5 pathway is also involved in angiogenesis by mediating VEGFA-induced specific subset of gene expression, cell migration, and tube formation. In response to VEGFA, is necessary and required for HDAC7 phosphorylation which induces HDAC7 nuclear export and endothelial cell proliferation and migration. During apoptosis induced by cytarabine and other genotoxic agents, PRKD1 is cleaved by caspase-3 at Asp-378, resulting in activation of its kinase function and increased sensitivity of cells to the cytotoxic effects of genotoxic agents. In epithelial cells, is required for transducing flagellin-stimulated inflammatory responses by binding and phosphorylating TLR5, which contributes to MAPK14/p38 activation and production of inflammatory cytokines. May play a role in inflammatory response by mediating activation of NF-kappa-B. May be involved in pain transmission by directly modulating TRPV1 receptor.

Homo sapiens (taxid: 9606)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

EC: 3

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	87
350426316	618	PREDICTED: hypothetical protein LOC10074	0.816	0.114	0.561	4e-15
340723644	618	PREDICTED: hypothetical protein LOC10064	0.816	0.114	0.561	4e-15
328776502	623	PREDICTED: serine/threonine-protein kina	0.505	0.070	0.795	6e-15
380022600	620	PREDICTED: serine/threonine-protein kina	0.505	0.070	0.795	7e-15
383857727	578	PREDICTED: serine/threonine-protein kina	0.505	0.076	0.795	1e-14
156550883	757	PREDICTED: hypothetical protein LOC10011	0.505	0.058	0.772	1e-14
321477878	301	hypothetical protein DAPPUDRAFT_191457 [	0.770	0.222	0.547	3e-14
193613274	751	PREDICTED: hypothetical protein LOC10016	0.793	0.091	0.563	2e-13
242005347	822	death associated protein kinase, putativ	0.505	0.053	0.727	6e-13
307190550	994	Serine/threonine-protein kinase 17A [Cam	0.505	0.044	0.704	3e-11

>gi|350426316|ref|XP_003494401.1| PREDICTED: hypothetical protein LOC100745919 [Bombus impatiens]

 Score = 85.5 bits (210), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 41/73 (56%), Positives = 53/73 (72%), Gaps = 2/73 (2%)

Query: 14  RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDV 73
           R VA++   +LG +   F  + ++     +PQNLVLTGE+PDCDVKLCDFGISR++S   
Sbjct: 135 RQVARLLKQILGGIA--FLHSLNVAHLDIKPQNLVLTGEFPDCDVKLCDFGISRYISHGA 192

Query: 74  DVREILGTPDYVG 86
           D+REILGTPDYV 
Sbjct: 193 DIREILGTPDYVA 205

Source: Bombus impatiens

Species: Bombus impatiens

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|340723644|ref|XP_003400199.1| PREDICTED: hypothetical protein LOC100645807 [Bombus terrestris]

 Score = 85.1 bits (209), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 41/73 (56%), Positives = 53/73 (72%), Gaps = 2/73 (2%)

Query: 14  RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDV 73
           R VA++   +LG +   F  + ++     +PQNLVLTGE+PDCDVKLCDFGISR++S   
Sbjct: 135 RQVARLLKQILGGIA--FLHSLNVAHLDIKPQNLVLTGEFPDCDVKLCDFGISRYISHGA 192

Query: 74  DVREILGTPDYVG 86
           D+REILGTPDYV 
Sbjct: 193 DIREILGTPDYVA 205

Source: Bombus terrestris

Species: Bombus terrestris

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|328776502|ref|XP_624284.2| PREDICTED: serine/threonine-protein kinase 17A-like [Apis mellifera]

 Score = 84.7 bits (208), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 35/44 (79%), Positives = 40/44 (90%)

Query: 43  QPQNLVLTGEYPDCDVKLCDFGISRHLSRDVDVREILGTPDYVG 86
           +PQNLVLTGE+PDCDVKLCDFGISR++S   D+REILGTPDYV 
Sbjct: 162 KPQNLVLTGEFPDCDVKLCDFGISRYISHGADIREILGTPDYVA 205

Source: Apis mellifera

Species: Apis mellifera

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|380022600|ref|XP_003695128.1| PREDICTED: serine/threonine-protein kinase 17A-like [Apis florea]

 Score = 84.3 bits (207), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 35/44 (79%), Positives = 40/44 (90%)

Query: 43  QPQNLVLTGEYPDCDVKLCDFGISRHLSRDVDVREILGTPDYVG 86
           +PQNLVLTGE+PDCDVKLCDFGISR++S   D+REILGTPDYV 
Sbjct: 162 KPQNLVLTGEFPDCDVKLCDFGISRYISHGADIREILGTPDYVA 205

Source: Apis florea

Species: Apis florea

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|383857727|ref|XP_003704355.1| PREDICTED: serine/threonine-protein kinase 17A-like [Megachile rotundata]

 Score = 84.0 bits (206), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 35/44 (79%), Positives = 40/44 (90%)

Query: 43  QPQNLVLTGEYPDCDVKLCDFGISRHLSRDVDVREILGTPDYVG 86
           +PQNLVLTGE+PDCDVKLCDFGISR++S   D+REILGTPDYV 
Sbjct: 162 KPQNLVLTGEFPDCDVKLCDFGISRYISHGADIREILGTPDYVA 205

Source: Megachile rotundata

Species: Megachile rotundata

Genus: Megachile

Family: Megachilidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|156550883|ref|XP_001602292.1| PREDICTED: hypothetical protein LOC100118283 [Nasonia vitripennis]

 Score = 83.6 bits (205), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 34/44 (77%), Positives = 40/44 (90%)

Query: 43  QPQNLVLTGEYPDCDVKLCDFGISRHLSRDVDVREILGTPDYVG 86
           +PQNLVLTGE+PDCDVKLCDFGISR++S   D+REILGTPDY+ 
Sbjct: 162 KPQNLVLTGEFPDCDVKLCDFGISRYISHGADIREILGTPDYIA 205

Source: Nasonia vitripennis

Species: Nasonia vitripennis

Genus: Nasonia

Family: Pteromalidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|321477878|gb|EFX88836.1| hypothetical protein DAPPUDRAFT_191457 [Daphnia pulex]

 Score = 82.8 bits (203), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 40/73 (54%), Positives = 50/73 (68%), Gaps = 6/73 (8%)

Query: 16  VAKVTVTLLGSLN--HHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDV 73
           V +    +LG L+  H F   H   +    PQNL+LTG +PDCD+KLCDFGI+RH++R  
Sbjct: 157 VVRFLRQVLGGLSFLHQFDIAHLDLK----PQNLLLTGPFPDCDIKLCDFGIARHIARGA 212

Query: 74  DVREILGTPDYVG 86
           DVREILGTPDYV 
Sbjct: 213 DVREILGTPDYVA 225

Source: Daphnia pulex

Species: Daphnia pulex

Genus: Daphnia

Family: Daphniidae

Order: Diplostraca

Class: Branchiopoda

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|193613274|ref|XP_001942516.1| PREDICTED: hypothetical protein LOC100165267 [Acyrthosiphon pisum]

 Score = 79.7 bits (195), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 40/71 (56%), Positives = 51/71 (71%), Gaps = 2/71 (2%)

Query: 16  VAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDVDV 75
           VA++   +L  L  H+  T ++     +PQNLVLT ++P+CDVKLCDFGISR+LS   DV
Sbjct: 148 VARLMRQILDGL--HYLHTINVAHLDIKPQNLVLTADFPNCDVKLCDFGISRYLSEGADV 205

Query: 76  REILGTPDYVG 86
           REILGTPDYV 
Sbjct: 206 REILGTPDYVA 216

Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|242005347|ref|XP_002423531.1| death associated protein kinase, putative [Pediculus humanus corporis] gi|212506645|gb|EEB10793.1| death associated protein kinase, putative [Pediculus humanus corporis]

 Score = 78.2 bits (191), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 32/44 (72%), Positives = 38/44 (86%)

Query: 43  QPQNLVLTGEYPDCDVKLCDFGISRHLSRDVDVREILGTPDYVG 86
           +PQNLVLT E+P CDVKLCDFGISR++ +  D+REILGTPDYV 
Sbjct: 139 KPQNLVLTSEFPGCDVKLCDFGISRYIGQSADIREILGTPDYVA 182

Source: Pediculus humanus corporis

Species: Pediculus humanus

Genus: Pediculus

Family: Pediculidae

Order: Phthiraptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307190550|gb|EFN74537.1| Serine/threonine-protein kinase 17A [Camponotus floridanus]

 Score = 72.8 bits (177), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 31/44 (70%), Positives = 35/44 (79%)

Query: 43 QPQNLVLTGEYPDCDVKLCDFGISRHLSRDVDVREILGTPDYVG 86
          QPQNLV+ G +PDCDVKLCDF ISR +    +VREILGTPDYV 
Sbjct: 2  QPQNLVMMGSFPDCDVKLCDFEISRVILEGTEVREILGTPDYVA 45

Source: Camponotus floridanus

Species: Camponotus floridanus

Genus: Camponotus

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	87
UNIPROTKB|Q9GM70	397	STK17A "Serine/threonine-prote	0.643	0.141	0.464	4e-09
UNIPROTKB|Q9UEE5	414	STK17A "Serine/threonine-prote	0.643	0.135	0.464	1.5e-08
UNIPROTKB|G5E5A0	281	STK17A "Uncharacterized protei	0.632	0.195	0.436	2.3e-08
ZFIN|ZDB-GENE-030131-5556	367	stk17a "serine/threonine kinas	0.494	0.117	0.581	3.3e-08
UNIPROTKB|J9P4D3	290	STK17A "Uncharacterized protei	0.632	0.189	0.436	4.2e-08
UNIPROTKB|F1PCL9	367	STK17A "Uncharacterized protei	0.632	0.149	0.436	7e-08
FB|FBgn0052666	784	Drak "Death-associated protein	0.494	0.054	0.558	2.9e-07
UNIPROTKB|F1MSI1	372	STK17B "Uncharacterized protei	0.643	0.150	0.375	4.2e-07
RGD|620457	371	Stk17b "serine/threonine kinas	0.643	0.150	0.375	5.4e-07
UNIPROTKB|Q91XS8	371	Stk17b "Serine/threonine-prote	0.643	0.150	0.375	5.4e-07

UNIPROTKB|Q9GM70 STK17A "Serine/threonine-protein kinase 17A" [Oryctolagus cuniculus (taxid:9986)]

 Score = 142 (55.0 bits), Expect = 4.0e-09, P = 4.0e-09
 Identities = 26/56 (46%), Positives = 38/56 (67%)

Query:    30 HFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDVDVREILGTPDYV 85
             HF  TH +     +PQN++LT E P  D+K+ DFG+SR +    ++REI+GTP+YV
Sbjct:   158 HFLHTHDVVHLDLKPQNILLTSESPLGDIKIVDFGLSRIVKNSEELREIMGTPEYV 213

GO:0005524 "ATP binding" evidence=ISS

GO:0006917 "induction of apoptosis" evidence=IMP

GO:0007243 "intracellular protein kinase cascade" evidence=ISS;IDA

GO:0043065 "positive regulation of apoptotic process" evidence=ISS

GO:2000377 "regulation of reactive oxygen species metabolic process" evidence=ISS

UNIPROTKB|Q9UEE5 STK17A "Serine/threonine-protein kinase 17A" [Homo sapiens (taxid:9606)]

 Score = 137 (53.3 bits), Expect = 1.5e-08, P = 1.5e-08
 Identities = 26/56 (46%), Positives = 37/56 (66%)

Query:    30 HFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDVDVREILGTPDYV 85
             HF  T  +     +PQN++LT E P  D+K+ DFG+SR L    ++REI+GTP+YV
Sbjct:   175 HFLHTRDVVHLDLKPQNILLTSESPLGDIKIVDFGLSRILKNSEELREIMGTPEYV 230

GO:0006915 "apoptotic process" evidence=IEA

GO:0005634 "nucleus" evidence=IDA

GO:0005524 "ATP binding" evidence=IDA

GO:0004674 "protein serine/threonine kinase activity" evidence=IDA

GO:0006468 "protein phosphorylation" evidence=IDA

GO:0007243 "intracellular protein kinase cascade" evidence=IDA

GO:0006917 "induction of apoptosis" evidence=IMP

GO:0043065 "positive regulation of apoptotic process" evidence=IMP

GO:2000377 "regulation of reactive oxygen species metabolic process" evidence=IMP

UNIPROTKB|G5E5A0 STK17A "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 132 (51.5 bits), Expect = 2.3e-08, P = 2.3e-08
 Identities = 24/55 (43%), Positives = 37/55 (67%)

Query:    31 FTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDVDVREILGTPDYV 85
             F   H +     +PQN++LT E P  D+K+ DFG+SR + +  ++REI+GTP+YV
Sbjct:    43 FLHAHDVVHLDLKPQNILLTSESPLGDIKIVDFGLSRIMKKSEELREIMGTPEYV 97

GO:2000377 "regulation of reactive oxygen species metabolic process" evidence=IEA

GO:0007243 "intracellular protein kinase cascade" evidence=IEA

GO:0006917 "induction of apoptosis" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

ZFIN|ZDB-GENE-030131-5556 stk17a "serine/threonine kinase 17a" [Danio rerio (taxid:7955)]

 Score = 133 (51.9 bits), Expect = 3.3e-08, P = 3.3e-08
 Identities = 25/43 (58%), Positives = 34/43 (79%)

Query:    43 QPQNLVLTGEYPDCDVKLCDFGISRHLSRDVDVREILGTPDYV 85
             +PQN++LT E P  D+K+ DFG+SR LS   +VREI+GTP+YV
Sbjct:   172 KPQNILLTSESPLGDIKIVDFGLSRLLSNSHEVREIMGTPEYV 214

GO:0004672 "protein kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

UNIPROTKB|J9P4D3 STK17A "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 130 (50.8 bits), Expect = 4.2e-08, P = 4.2e-08
 Identities = 24/55 (43%), Positives = 36/55 (65%)

Query:    31 FTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDVDVREILGTPDYV 85
             F   H +     +PQN++LT E P  D+K+ DFG+SR +    ++REI+GTP+YV
Sbjct:    85 FLHAHDVVHLDLKPQNILLTSESPLGDIKIVDFGLSRIMKNSEELREIMGTPEYV 139

GO:0005524 "ATP binding" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

UNIPROTKB|F1PCL9 STK17A "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 130 (50.8 bits), Expect = 7.0e-08, P = 7.0e-08
 Identities = 24/55 (43%), Positives = 36/55 (65%)

Query:    31 FTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDVDVREILGTPDYV 85
             F   H +     +PQN++LT E P  D+K+ DFG+SR +    ++REI+GTP+YV
Sbjct:   129 FLHAHDVVHLDLKPQNILLTSESPLGDIKIVDFGLSRIMKNSEELREIMGTPEYV 183

GO:2000377 "regulation of reactive oxygen species metabolic process" evidence=IEA

GO:0007243 "intracellular protein kinase cascade" evidence=IEA

GO:0006917 "induction of apoptosis" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

FB|FBgn0052666 Drak "Death-associated protein kinase related" [Drosophila melanogaster (taxid:7227)]

 Score = 129 (50.5 bits), Expect = 2.9e-07, P = 2.9e-07
 Identities = 24/43 (55%), Positives = 33/43 (76%)

Query:    43 QPQNLVLTGEYPDCDVKLCDFGISRHLSRDVDVREILGTPDYV 85
             +PQN++L GE  +  +KLCDFGISR +   ++VRE+ GTPDYV
Sbjct:   162 KPQNILLAGERIEDGLKLCDFGISRVVCEGINVREMAGTPDYV 204

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA;NAS

GO:0006468 "protein phosphorylation" evidence=IMP;NAS

GO:0005575 "cellular_component" evidence=ND

GO:0007155 "cell adhesion" evidence=IMP

GO:0008360 "regulation of cell shape" evidence=IMP

GO:0005524 "ATP binding" evidence=IEA

GO:0002009 "morphogenesis of an epithelium" evidence=IGI

GO:0007480 "imaginal disc-derived leg morphogenesis" evidence=IMP

GO:0007476 "imaginal disc-derived wing morphogenesis" evidence=IMP

UNIPROTKB|F1MSI1 STK17B "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 123 (48.4 bits), Expect = 4.2e-07, P = 4.2e-07
 Identities = 21/56 (37%), Positives = 38/56 (67%)

Query:    30 HFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDVDVREILGTPDYV 85
             H+   +++     +PQN++L+  YP  D+K+ DFG+SR +    ++REI+GTP+Y+
Sbjct:   147 HYLHQNNIVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKIGNACELREIMGTPEYL 202

GO:0006917 "induction of apoptosis" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

RGD|620457 Stk17b "serine/threonine kinase 17b" [Rattus norvegicus (taxid:10116)]

 Score = 122 (48.0 bits), Expect = 5.4e-07, P = 5.4e-07
 Identities = 21/56 (37%), Positives = 38/56 (67%)

Query:    30 HFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDVDVREILGTPDYV 85
             H+   +++     +PQN++L+  YP  D+K+ DFG+SR +    ++REI+GTP+Y+
Sbjct:   147 HYLHQNNIVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKIGNASELREIMGTPEYL 202

GO:0004672 "protein kinase activity" evidence=IDA

GO:0004674 "protein serine/threonine kinase activity" evidence=ISO;ISS;IDA;TAS

GO:0005515 "protein binding" evidence=IPI

GO:0005524 "ATP binding" evidence=ISO;ISS;IDA

GO:0005634 "nucleus" evidence=ISO;ISS;IDA

GO:0005793 "endoplasmic reticulum-Golgi intermediate compartment" evidence=IEA

GO:0005886 "plasma membrane" evidence=IEA

GO:0006468 "protein phosphorylation" evidence=ISO;ISS;IDA

GO:0006915 "apoptotic process" evidence=IEA

GO:0006917 "induction of apoptosis" evidence=ISO;ISS;IMP

GO:0007243 "intracellular protein kinase cascade" evidence=ISO;ISS;IDA

GO:0012501 "programmed cell death" evidence=IDA

GO:0015629 "actin cytoskeleton" evidence=IMP

GO:0046777 "protein autophosphorylation" evidence=IDA

UNIPROTKB|Q91XS8 Stk17b "Serine/threonine-protein kinase 17B" [Rattus norvegicus (taxid:10116)]

 Score = 122 (48.0 bits), Expect = 5.4e-07, P = 5.4e-07
 Identities = 21/56 (37%), Positives = 38/56 (67%)

Query:    30 HFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDVDVREILGTPDYV 85
             H+   +++     +PQN++L+  YP  D+K+ DFG+SR +    ++REI+GTP+Y+
Sbjct:   147 HYLHQNNIVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKIGNASELREIMGTPEYL 202

GO:0005515 "protein binding" evidence=IPI

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	87
smart00220	254	smart00220, S_TKc, Serine/Threonine protein kinase	3e-07
cd06616	288	cd06616, PKc_MKK4, Catalytic domain of the dual-sp	2e-05
cd08215	258	cd08215, STKc_Nek, Catalytic domain of the Protein	3e-05
cd06605	265	cd06605, PKc_MAPKK, Catalytic domain of the dual-s	2e-04
cd07852	337	cd07852, STKc_MAPK15, Catalytic domain of the Seri	5e-04
cd06608	275	cd06608, STKc_myosinIII_like, Catalytic domain of	6e-04
cd05122	253	cd05122, PKc_STE, Catalytic domain of STE family P	7e-04
cd00180	215	cd00180, PKc, Catalytic domain of Protein Kinases	8e-04
pfam00069	260	pfam00069, Pkinase, Protein kinase domain	0.001
cd05118	283	cd05118, STKc_CMGC, Catalytic domain of CMGC famil	0.003

>gnl|CDD|214567 smart00220, S_TKc, Serine/Threonine protein kinases, catalytic domain

 Score = 45.6 bits (109), Expect = 3e-07
 Identities = 16/42 (38%), Positives = 25/42 (59%), Gaps = 3/42 (7%)

Query: 44  PQNLVLTGEYPDCDVKLCDFGISRHLSRDVDVREILGTPDYV 85
           P+N++L     D  VKL DFG++R L     +   +GTP+Y+
Sbjct: 125 PENILLDE---DGHVKLADFGLARQLDPGEKLTTFVGTPEYM 163

Phosphotransferases. Serine or threonine-specific kinase subfamily. Length = 254

>gnl|CDD|132947 cd06616, PKc_MKK4, Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4

 Score = 40.4 bits (95), Expect = 2e-05
 Identities = 22/73 (30%), Positives = 36/73 (49%), Gaps = 11/73 (15%)

Query: 11  RIP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHL 69
            IP  ++ K+ V  + +LN+       ++R   +P N++L       ++KLCDFGIS  L
Sbjct: 103 VIPEEILGKIAVATVKALNYLKEELKIIHRDV-KPSNILLDRN---GNIKLCDFGISGQL 158

Query: 70  ------SRDVDVR 76
                 +RD   R
Sbjct: 159 VDSIAKTRDAGCR 171

Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates the downstream targets, c-Jun N-terminal kinase (JNK) and p38 MAPK, on specific threonine and tyrosine residues. JNK and p38 are collectively known as stress-activated MAPKs, as they are activated in response to a variety of environmental stresses and pro-inflammatory cytokines. Their activation is associated with the induction of cell death. Mice deficient in MKK4 die during embryogenesis and display anemia, severe liver hemorrhage, and abnormal hepatogenesis. MKK4 may also play roles in the immune system and in cardiac hypertrophy. It plays a major role in cancer as a tumor and metastasis suppressor. Under certain conditions, MKK4 is pro-oncogenic. Length = 288

>gnl|CDD|173755 cd08215, STKc_Nek, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase

 Score = 39.8 bits (94), Expect = 3e-05
 Identities = 21/43 (48%), Positives = 28/43 (65%), Gaps = 4/43 (9%)

Query: 44  PQNLVLTGEYPDCDVKLCDFGISRHLSRDVDV-REILGTPDYV 85
           PQN+ LT       VKL DFGIS+ LS  VD+ + ++GTP Y+
Sbjct: 131 PQNIFLTSNG---LVKLGDFGISKVLSSTVDLAKTVVGTPYYL 170

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Length = 258

>gnl|CDD|173723 cd06605, PKc_MAPKK, Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase

 Score = 37.3 bits (87), Expect = 2e-04
 Identities = 20/66 (30%), Positives = 35/66 (53%), Gaps = 9/66 (13%)

Query: 11  RIP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLT--GEYPDCDVKLCDFGISR 67
           RIP R++ K+ V +L  L +       ++R   +P N+++   G+     +KLCDFG+S 
Sbjct: 96  RIPERILGKIAVAVLKGLTYLHEKHKIIHRDV-KPSNILVNSRGQ-----IKLCDFGVSG 149

Query: 68  HLSRDV 73
            L   +
Sbjct: 150 QLVNSL 155

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity PKs that phosphorylate their downstream targets, MAPKs, at specific threonine and tyrosine residues. There are three MAPK subfamilies: extracellular signal-regulated kinase (ERK), c-Jun N-terminal kinase (JNK), and p38. In mammalian cells, there are seven MAPKKs (named MKK1-7) and 20 MAPKKKs. Each MAPK subfamily can be activated by at least two cognate MAPKKs and by multiple MAPKKKs. Length = 265

>gnl|CDD|173747 cd07852, STKc_MAPK15, Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15

 Score = 36.4 bits (85), Expect = 5e-04
 Identities = 18/42 (42%), Positives = 23/42 (54%), Gaps = 3/42 (7%)

Query: 44  PQNLVLTGEYPDCDVKLCDFGISRHLSRDVDVREILGTPDYV 85
           P N++L     DC VKL DFG++R LS   +  E     DYV
Sbjct: 135 PSNILLNS---DCRVKLADFGLARSLSELEENPENPVLTDYV 173

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimuli whereas ERK8 shows low basal activity and is activated by DNA-damaging agents. ERK7 and ERK8 also have different substrate profiles. Genome analysis shows that they are orthologs with similar gene structures. ERK7 and ERK 8 may be involved in the signaling of some nuclear receptor transcription factors. ERK7 regulates hormone-dependent degradation of estrogen receptor alpha while ERK8 down-regulates the transcriptional co-activation androgen and glucocorticoid receptors. Length = 337

>gnl|CDD|173725 cd06608, STKc_myosinIII_like, Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases

 Score = 36.5 bits (85), Expect = 6e-04
 Identities = 16/39 (41%), Positives = 22/39 (56%), Gaps = 4/39 (10%)

Query: 45  QNLVLTGEYPDCDVKLCDFGISRHLSRDVDVRE-ILGTP 82
           QN++LT      +VKL DFG+S  L   +  R   +GTP
Sbjct: 142 QNILLTKNA---EVKLVDFGVSAQLDSTLGRRNTFIGTP 177

Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin III may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. It may also function as a cargo carrier during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. The Drosophila class III myosin, called NinaC (Neither inactivation nor afterpotential protein C), is critical in normal adaptation and termination of photoresponse. Vertebrates contain two isoforms of class III myosin, IIIA and IIIB. This subfamily also includes mammalian NIK-like embryo-specific kinase (NESK), Traf2- and Nck-interacting kinase (TNIK), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6). MAP4Ks are involved in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Length = 275

>gnl|CDD|173659 cd05122, PKc_STE, Catalytic domain of STE family Protein Kinases

 Score = 36.0 bits (84), Expect = 7e-04
 Identities = 16/41 (39%), Positives = 23/41 (56%), Gaps = 3/41 (7%)

Query: 44  PQNLVLTGEYPDCDVKLCDFGISRHLSRDVDVREILGTPDY 84
             N++LT    D +VKL DFG+S  LS       ++GTP +
Sbjct: 126 AANILLT---SDGEVKLIDFGLSAQLSDTKARNTMVGTPYW 163

Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and activated by a MAPKK, which itself is phosphorylated and activated by a MAPKKK. Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAPKKK to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. Other STE family members include p21-activated kinases (PAKs) and class III myosins, among others. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain, which can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, as well as autophosphorylate the C-terminal motor domain. They play an important role in maintaining the structural integrity of photoreceptor cell microvilli. Length = 253

>gnl|CDD|173623 cd00180, PKc, Catalytic domain of Protein Kinases

 Score = 35.7 bits (83), Expect = 8e-04
 Identities = 17/43 (39%), Positives = 28/43 (65%), Gaps = 3/43 (6%)

Query: 44  PQNLVLTGEYPDCDVKLCDFGISRHLSRDVDV-REILGTPDYV 85
           P+N++L  +     VKL DFG+S+ L+ D  + + I+GTP Y+
Sbjct: 120 PENILLDSDNGK--VKLADFGLSKLLTSDKSLLKTIVGTPAYM 160

Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which one kinase activates a second kinase, which in turn, may act on other kinases; this sequential action transmits a signal from the cell surface to target proteins, which results in cellular responses. The PK family is one of the largest known protein families with more than 100 homologous yeast enzymes and 550 human proteins. A fraction of PK family members are pseudokinases that lack crucial residues for catalytic activity. The mutiplicity of kinases allows for specific regulation according to substrate, tissue distribution, and cellular localization. PKs regulate many cellular processes including proliferation, division, differentiation, motility, survival, metabolism, cell-cycle progression, cytoskeletal rearrangement, immunity, and neuronal functions. Many kinases are implicated in the development of various human diseases including different types of cancer. Length = 215

>gnl|CDD|215690 pfam00069, Pkinase, Protein kinase domain

 Score = 35.3 bits (82), Expect = 0.001
 Identities = 13/43 (30%), Positives = 24/43 (55%), Gaps = 4/43 (9%)

Query: 44  PQNLVLTGEYPDCDVKLCDFGISR-HLSRDVDVREILGTPDYV 85
           P+N++L     +  VK+ DFG+++  L     +   +GTP Y+
Sbjct: 126 PENILLD---ENGVVKIADFGLAKKLLKSSSSLTTFVGTPWYM 165

Length = 260

>gnl|CDD|143333 cd05118, STKc_CMGC, Catalytic domain of CMGC family Serine/Threonine Kinases

 Score = 34.2 bits (79), Expect = 0.003
 Identities = 10/32 (31%), Positives = 18/32 (56%), Gaps = 3/32 (9%)

Query: 43  QPQNLVLTGEYPDCDVKLCDFGISRHLSRDVD 74
           +P+NL++     +  +KL DFG++R     V 
Sbjct: 125 KPENLLINT---EGVLKLADFGLARSFGSPVR 153

Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Length = 283

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	87
KOG0595|consensus	429		99.86
KOG0615|consensus	475		99.84
KOG0598|consensus	357		99.84
KOG0583|consensus	370		99.84
KOG0616|consensus	355		99.82
KOG0575|consensus	592		99.82
KOG0593|consensus	396		99.82
KOG0661|consensus	538		99.82
KOG0599|consensus	411		99.82
KOG0594|consensus	323		99.81
KOG0581|consensus	364		99.8
KOG0658|consensus	364		99.78
KOG0592|consensus	604		99.77
KOG0611|consensus	668		99.76
KOG0660|consensus	359		99.76
KOG0591|consensus	375		99.76
KOG0198|consensus	313		99.75
KOG0694|consensus	694		99.74
KOG0600|consensus	560		99.74
KOG0659|consensus	318		99.72
KOG0578|consensus	550		99.71
KOG0033|consensus	355		99.71
KOG0588|consensus	786		99.71
KOG0986|consensus	591		99.71
KOG4236|consensus	888		99.71
KOG0614|consensus	732		99.7
KOG0604|consensus	400		99.7
KOG0663|consensus	419		99.7
KOG0585|consensus	576		99.69
KOG0192|consensus	362		99.68
KOG0032|consensus	382		99.67
KOG0612|consensus	1317		99.67
KOG4717|consensus	864		99.67
KOG0696|consensus	683		99.67
KOG0589|consensus	426		99.64
KOG0597|consensus	808		99.64
KOG0983|consensus	391		99.64
KOG0667|consensus	586		99.63
PTZ00036	440	glycogen synthase kinase; Provisional	99.63
KOG0579|consensus	1187		99.63
cd05597	331	STKc_DMPK_like Catalytic domain of Myotonic Dystro	99.61
KOG0662|consensus	292		99.61
PHA03209	357	serine/threonine kinase US3; Provisional	99.61
cd05571	323	STKc_PKB Catalytic domain of the Protein Serine/Th	99.61
cd05623	332	STKc_MRCK_alpha Catalytic domain of the Protein Se	99.61
cd05624	331	STKc_MRCK_beta Catalytic domain of the Protein Ser	99.61
cd05628	363	STKc_NDR1 Catalytic domain of the Protein Serine/T	99.6
KOG0664|consensus	449		99.6
KOG0596|consensus	677		99.6
cd07869	303	STKc_PFTAIRE1 Catalytic domain of the Serine/Threo	99.6
KOG0577|consensus	948		99.6
cd05602	325	STKc_SGK1 Catalytic domain of the Protein Serine/T	99.6
cd07874	355	STKc_JNK3 Catalytic domain of the Serine/Threonine	99.6
cd05601	330	STKc_CRIK Catalytic domain of the Protein Serine/T	99.6
cd05631	285	STKc_GRK4 Catalytic domain of the Protein Serine/T	99.6
KOG0193|consensus	678		99.59
KOG0690|consensus	516		99.59
cd05586	330	STKc_Sck1_like Catalytic domain of Suppressor of l	99.59
cd05614	332	STKc_MSK2_N N-terminal catalytic domain of the Pro	99.59
cd07862	290	STKc_CDK6 Catalytic domain of the Serine/Threonine	99.59
cd07876	359	STKc_JNK2 Catalytic domain of the Serine/Threonine	99.59
cd05621	370	STKc_ROCK2 Catalytic domain of the Protein Serine/	99.59
cd07871	288	STKc_PCTAIRE3 Catalytic domain of the Serine/Threo	99.59
PHA03212	391	serine/threonine kinase US3; Provisional	99.58
cd05592	316	STKc_nPKC_theta_delta Catalytic domain of the Prot	99.58
cd07868	317	STKc_CDK8 Catalytic domain of the Serine/Threonine	99.58
cd05593	328	STKc_PKB_gamma Catalytic domain of the Protein Ser	99.58
cd05616	323	STKc_cPKC_beta Catalytic domain of the Protein Ser	99.58
KOG0695|consensus	593		99.57
cd05617	327	STKc_aPKC_zeta Catalytic domain of the Protein Ser	99.57
cd05587	324	STKc_cPKC Catalytic domain of the Protein Serine/T	99.57
cd07875	364	STKc_JNK1 Catalytic domain of the Serine/Threonine	99.57
cd05622	371	STKc_ROCK1 Catalytic domain of the Protein Serine/	99.57
cd05594	325	STKc_PKB_alpha Catalytic domain of the Protein Ser	99.57
PLN03225	566	Serine/threonine-protein kinase SNT7; Provisional	99.57
cd05575	323	STKc_SGK Catalytic domain of the Protein Serine/Th	99.57
cd05585	312	STKc_YPK1_like Catalytic domain of Yeast Protein K	99.57
PTZ00426	340	cAMP-dependent protein kinase catalytic subunit; P	99.56
PHA02882	294	putative serine/threonine kinase; Provisional	99.56
cd05604	325	STKc_SGK3 Catalytic domain of the Protein Serine/T	99.56
cd05588	329	STKc_aPKC Catalytic domain of the Protein Serine/T	99.56
cd05595	323	STKc_PKB_beta Catalytic domain of the Protein Seri	99.56
cd05590	320	STKc_nPKC_eta Catalytic domain of the Protein Seri	99.56
cd05591	321	STKc_nPKC_epsilon Catalytic domain of the Protein	99.56
PHA03211	461	serine/threonine kinase US3; Provisional	99.56
KOG0665|consensus	369		99.56
cd05603	321	STKc_SGK2 Catalytic domain of the Protein Serine/T	99.55
cd05618	329	STKc_aPKC_iota Catalytic domain of the Protein Ser	99.55
PHA03210	501	serine/threonine kinase US3; Provisional	99.55
cd05615	323	STKc_cPKC_alpha Catalytic domain of the Protein Se	99.55
cd05573	350	STKc_ROCK_NDR_like Catalytic domain of ROCK- and N	99.55
PTZ00263	329	protein kinase A catalytic subunit; Provisional	99.55
cd05584	323	STKc_p70S6K Catalytic domain of the Protein Serine	99.55
cd05600	333	STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p-	99.55
KOG0582|consensus	516		99.55
cd05625	382	STKc_LATS1 Catalytic domain of the Protein Serine/	99.55
cd07863	288	STKc_CDK4 Catalytic domain of the Serine/Threonine	99.55
cd05599	364	STKc_NDR_like Catalytic domain of Nuclear Dbf2-Rel	99.55
cd05620	316	STKc_nPKC_delta Catalytic domain of the Protein Se	99.55
PTZ00267	478	NIMA-related protein kinase; Provisional	99.55
cd05629	377	STKc_NDR_like_fungal Catalytic domain of Fungal Nu	99.55
cd05627	360	STKc_NDR2 Catalytic domain of the Protein Serine/T	99.54
cd05626	381	STKc_LATS2 Catalytic domain of the Protein Serine/	99.54
PLN00181	793	protein SPA1-RELATED; Provisional	99.54
cd05596	370	STKc_ROCK Catalytic domain of the Protein Serine/T	99.54
cd07878	343	STKc_p38beta_MAPK11 Catalytic domain of the Serine	99.54
cd07859	338	STKc_TDY_MAPK_plant Catalytic domain of the Serine	99.54
cd05598	376	STKc_LATS Catalytic domain of the Protein Serine/T	99.53
cd05612	291	STKc_PRKX_like Catalytic domain of PRKX-like Prote	99.53
cd05619	316	STKc_nPKC_theta Catalytic domain of the Protein Se	99.53
PHA03207	392	serine/threonine kinase US3; Provisional	99.53
KOG0580|consensus	281		99.53
cd05589	324	STKc_PKN Catalytic domain of the Protein Serine/Th	99.52
PTZ00283	496	serine/threonine protein kinase; Provisional	99.52
KOG0586|consensus	596		99.52
cd05582	318	STKc_RSK_N N-terminal catalytic domain of the Prot	99.52
KOG0201|consensus	467		99.51
KOG0607|consensus	463		99.51
cd05102	338	PTKc_VEGFR3 Catalytic domain of the Protein Tyrosi	99.51
cd07848	287	STKc_CDKL5 Catalytic domain of the Serine/Threonin	99.51
cd07872	309	STKc_PCTAIRE2 Catalytic domain of the Serine/Threo	99.5
cd07867	317	STKc_CDC2L6 Catalytic domain of Serine/Threonine K	99.5
cd05608	280	STKc_GRK1 Catalytic domain of the Protein Serine/T	99.5
KOG0197|consensus	468		99.5
PLN00034	353	mitogen-activated protein kinase kinase; Provision	99.5
KOG4250|consensus	732		99.49
cd05607	277	STKc_GRK7 Catalytic domain of the Protein Serine/T	99.49
cd05108	316	PTKc_EGFR Catalytic domain of the Protein Tyrosine	99.49
KOG0584|consensus	632		99.49
KOG0668|consensus	338		99.49
cd05109	279	PTKc_HER2 Catalytic domain of the Protein Tyrosine	99.49
cd05632	285	STKc_GRK5 Catalytic domain of the Protein Serine/T	99.48
cd05570	318	STKc_PKC Catalytic domain of the Protein Serine/Th	99.48
cd07853	372	STKc_NLK Catalytic domain of the Serine/Threonine	99.48
PTZ00284	467	protein kinase; Provisional	99.47
cd05605	285	STKc_GRK4_like Catalytic domain of G protein-coupl	99.47
cd05630	285	STKc_GRK6 Catalytic domain of the Protein Serine/T	99.47
KOG0984|consensus	282		99.46
KOG0608|consensus	1034		99.46
KOG1035|consensus	1351		99.46
KOG4721|consensus	904		99.46
cd05111	279	PTK_HER3 Pseudokinase domain of the Protein Tyrosi	99.46
KOG0666|consensus	438		99.45
cd05096	304	PTKc_DDR1 Catalytic domain of the Protein Tyrosine	99.44
KOG4645|consensus	1509		99.44
PF00069	260	Pkinase: Protein kinase domain Protein kinase; unc	99.44
cd07850	353	STKc_JNK Catalytic domain of the Serine/Threonine	99.44
cd07839	284	STKc_CDK5 Catalytic domain of the Serine/Threonine	99.44
KOG4279|consensus	1226		99.43
cd05106	374	PTKc_CSF-1R Catalytic domain of the Protein Tyrosi	99.43
KOG0587|consensus	953		99.42
cd06643	282	STKc_SLK Catalytic domain of the Protein Serine/Th	99.42
cd05633	279	STKc_GRK3 Catalytic domain of the Protein Serine/T	99.42
cd05610	669	STKc_MASTL Catalytic domain of the Protein Serine/	99.41
KOG1163|consensus	341		99.41
cd07873	301	STKc_PCTAIRE1 Catalytic domain of the Serine/Threo	99.41
KOG1165|consensus	449		99.41
cd07843	293	STKc_CDC2L1 Catalytic domain of the Serine/Threoni	99.41
cd05091	283	PTKc_Ror2 Catalytic domain of the Protein Tyrosine	99.4
KOG0605|consensus	550		99.4
cd00192	262	PTKc Catalytic domain of Protein Tyrosine Kinases.	99.4
cd05054	337	PTKc_VEGFR Catalytic domain of the Protein Tyrosin	99.4
cd05077	262	PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of th	99.4
cd08223	257	STKc_Nek4 Catalytic domain of the Protein Serine/T	99.39
cd06645	267	STKc_MAP4K3 Catalytic domain of the Protein Serine	99.39
cd05037	259	PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the	99.39
cd06644	292	STKc_STK10_LOK Catalytic domain of the Protein Ser	99.39
cd07832	286	STKc_CCRK Catalytic domain of the Serine/Threonine	99.39
cd05115	257	PTKc_Zap-70 Catalytic domain of the Protein Tyrosi	99.39
cd07870	291	STKc_PFTAIRE2 Catalytic domain of the Serine/Threo	99.38
cd07831	282	STKc_MOK Catalytic domain of the Serine/Threonine	99.38
cd05606	278	STKc_beta_ARK Catalytic domain of the Protein Seri	99.38
cd05057	279	PTKc_EGFR_like Catalytic domain of Epidermal Growt	99.38
cd07857	332	STKc_MPK1 Catalytic domain of the Serine/Threonine	99.38
PRK09188	365	serine/threonine protein kinase; Provisional	99.38
cd05104	375	PTKc_Kit Catalytic domain of the Protein Tyrosine	99.38
cd05110	303	PTKc_HER4 Catalytic domain of the Protein Tyrosine	99.38
cd07861	285	STKc_CDK1_euk Catalytic domain of the Serine/Threo	99.38
cd06613	262	STKc_MAP4K3_like Catalytic domain of Mitogen-activ	99.38
cd08529	256	STKc_FA2-like Catalytic domain of the Protein Seri	99.38
KOG0669|consensus	376		99.37
cd05042	269	PTKc_Aatyk Catalytic domain of the Protein Tyrosin	99.37
cd06625	263	STKc_MEKK3_like Catalytic domain of MAP/ERK kinase	99.37
cd06611	280	STKc_SLK_like Catalytic domain of Ste20-like kinas	99.37
cd08220	256	STKc_Nek8 Catalytic domain of the Protein Serine/T	99.37
PRK13184	932	pknD serine/threonine-protein kinase; Reviewed	99.36
cd05116	257	PTKc_Syk Catalytic domain of the Protein Tyrosine	99.36
cd06649	331	PKc_MEK2 Catalytic domain of the dual-specificity	99.36
cd05051	296	PTKc_DDR Catalytic domain of the Protein Tyrosine	99.36
KOG0603|consensus	612		99.36
cd05613	290	STKc_MSK1_N N-terminal catalytic domain of the Pro	99.36
cd05580	290	STKc_PKA Catalytic domain of the Protein Serine/Th	99.36
cd07845	309	STKc_CDK10 Catalytic domain of the Serine/Threonin	99.36
PTZ00266	1021	NIMA-related protein kinase; Provisional	99.36
cd07844	291	STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like	99.36
KOG1027|consensus	903		99.36
cd07865	310	STKc_CDK9 Catalytic domain of the Serine/Threonine	99.35
cd05101	304	PTKc_FGFR2 Catalytic domain of the Protein Tyrosin	99.35
KOG1187|consensus	361		99.35
cd06619	279	PKc_MKK5 Catalytic domain of the dual-specificity	99.35
cd07849	336	STKc_ERK1_2_like Catalytic domain of Extracellular	99.35
cd05058	262	PTKc_Met_Ron Catalytic domain of the Protein Tyros	99.35
cd06638	286	STKc_myosinIIIA Catalytic domain of the Protein Se	99.35
smart00219	258	TyrKc Tyrosine kinase, catalytic domain. Phosphotr	99.35
cd05048	283	PTKc_Ror Catalytic Domain of the Protein Tyrosine	99.35
cd05075	272	PTKc_Axl Catalytic domain of the Protein Tyrosine	99.35
cd07841	298	STKc_CDK7 Catalytic domain of the Serine/Threonine	99.35
cd05572	262	STKc_cGK_PKG Catalytic domain of the Protein Serin	99.35
cd07830	283	STKc_MAK_like Catalytic domain of Male germ cell-A	99.35
cd05079	284	PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the	99.35
cd06637	272	STKc_TNIK Catalytic domain of the Protein Serine/T	99.34
cd06646	267	STKc_MAP4K5 Catalytic domain of the Protein Serine	99.34
cd05089	297	PTKc_Tie1 Catalytic domain of the Protein Tyrosine	99.34
cd07837	295	STKc_CdkB_plant Catalytic domain of the Serine/Thr	99.34
KOG1152|consensus	772		99.34
cd06608	275	STKc_myosinIII_like Catalytic domain of Class III	99.34
cd05082	256	PTKc_Csk Catalytic domain of the Protein Tyrosine	99.34
cd07847	286	STKc_CDKL1_4 Catalytic domain of the Serine/Threon	99.34
cd05059	256	PTKc_Tec_like Catalytic domain of Tec-like Protein	99.34
cd06617	283	PKc_MKK3_6 Catalytic domain of the dual-specificit	99.34
cd08219	255	STKc_Nek3 Catalytic domain of the Protein Serine/T	99.34
cd05081	284	PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of	99.34
cd07833	288	STKc_CDKL Catalytic domain of Cyclin-Dependent pro	99.33
cd06658	292	STKc_PAK5 Catalytic domain of the Protein Serine/T	99.33
PLN03224	507	probable serine/threonine protein kinase; Provisio	99.33
cd07838	287	STKc_CDK4_6_like Catalytic domain of Cyclin-Depend	99.33
cd07858	337	STKc_TEY_MAPK_plant Catalytic domain of the Serine	99.33
cd06650	333	PKc_MEK1 Catalytic domain of the dual-specificity	99.33
cd06618	296	PKc_MKK7 Catalytic domain of the dual-specificity	99.33
cd05064	266	PTKc_EphR_A10 Catalytic domain of the Protein Tyro	99.33
cd05033	266	PTKc_EphR Catalytic domain of Ephrin Receptor Prot	99.33
cd05114	256	PTKc_Tec_Rlk Catalytic domain of the Protein Tyros	99.33
cd07842	316	STKc_CDK8_like Catalytic domain of Cyclin-Dependen	99.33
cd05088	303	PTKc_Tie2 Catalytic domain of the Protein Tyrosine	99.33
cd05062	277	PTKc_IGF-1R Catalytic domain of the Protein Tyrosi	99.33
cd06616	288	PKc_MKK4 Catalytic domain of the dual-specificity	99.32
cd05093	288	PTKc_TrkB Catalytic domain of the Protein Tyrosine	99.32
cd05078	258	PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain	99.32
cd06652	265	STKc_MEKK2 Catalytic domain of the Protein Serine/	99.32
cd05086	268	PTKc_Aatyk2 Catalytic domain of the Protein Tyrosi	99.32
cd05118	283	STKc_CMGC Catalytic domain of CMGC family Serine/T	99.32
cd06624	268	STKc_ASK Catalytic domain of the Protein Serine/Th	99.32
cd06612	256	STKc_MST1_2 Catalytic domain of the Protein Serine	99.32
KOG0574|consensus	502		99.32
PLN00009	294	cyclin-dependent kinase A; Provisional	99.31
cd05103	343	PTKc_VEGFR2 Catalytic domain of the Protein Tyrosi	99.31
cd05113	256	PTKc_Btk_Bmx Catalytic domain of the Protein Tyros	99.31
cd05080	283	PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the	99.31
cd06632	258	STKc_MEKK1_plant Catalytic domain of the Protein S	99.31
cd08221	256	STKc_Nek9 Catalytic domain of the Protein Serine/T	99.31
cd05047	270	PTKc_Tie Catalytic domain of Tie Protein Tyrosine	99.31
KOG0671|consensus	415		99.31
cd05094	291	PTKc_TrkC Catalytic domain of the Protein Tyrosine	99.31
cd05105	400	PTKc_PDGFR_alpha Catalytic domain of the Protein T	99.3
PHA03390	267	pk1 serine/threonine-protein kinase 1; Provisional	99.3
cd05071	262	PTKc_Src Catalytic domain of the Protein Tyrosine	99.3
cd08228	267	STKc_Nek6 Catalytic domain of the Protein Serine/T	99.3
cd05099	314	PTKc_FGFR4 Catalytic domain of the Protein Tyrosin	99.3
cd06648	285	STKc_PAK_II Catalytic domain of the Protein Serine	99.3
cd08217	265	STKc_Nek2 Catalytic domain of the Protein Serine/T	99.3
cd06607	307	STKc_TAO Catalytic domain of the Protein Serine/Th	99.3
cd06659	297	STKc_PAK6 Catalytic domain of the Protein Serine/T	99.3
cd07866	311	STKc_BUR1 Catalytic domain of the Serine/Threonine	99.3
cd05087	269	PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein	99.29
cd06653	264	STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kina	99.29
cd05035	273	PTKc_Axl_like Catalytic Domain of Axl-like Protein	99.29
cd06609	274	STKc_MST3_like Catalytic domain of Mammalian Ste20	99.29
cd05066	267	PTKc_EphR_A Catalytic domain of the Protein Tyrosi	99.29
cd07834	330	STKc_MAPK Catalytic domain of the Serine/Threonine	99.29
cd05068	261	PTKc_Frk_like Catalytic domain of Fyn-related kina	99.29
cd05056	270	PTKc_FAK Catalytic domain of the Protein Tyrosine	99.29
cd05040	257	PTKc_Ack_like Catalytic domain of the Protein Tyro	99.29
cd05055	302	PTKc_PDGFR Catalytic domain of the Protein Tyrosin	99.29
cd05065	269	PTKc_EphR_B Catalytic domain of the Protein Tyrosi	99.29
cd07836	284	STKc_Pho85 Catalytic domain of the Serine/Threonin	99.29
cd05053	293	PTKc_FGFR Catalytic domain of the Protein Tyrosine	99.29
cd07877	345	STKc_p38alpha_MAPK14 Catalytic domain of the Serin	99.29
cd06628	267	STKc_MAPKKK_Byr2_like Catalytic domain of fungal B	99.29
cd05578	258	STKc_Yank1 Catalytic domain of the Protein Serine/	99.29
cd05076	274	PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of th	99.28
cd05069	260	PTKc_Yes Catalytic domain of the Protein Tyrosine	99.28
cd05084	252	PTKc_Fes Catalytic domain of the Protein Tyrosine	99.28
cd05611	260	STKc_Rim15_like Catalytic domain of fungal Rim15-l	99.28
cd07879	342	STKc_p38delta_MAPK13 Catalytic domain of the Serin	99.28
KOG4257|consensus	974		99.28
cd06651	266	STKc_MEKK3 Catalytic domain of the Protein Serine/	99.28
cd05090	283	PTKc_Ror1 Catalytic domain of the Protein Tyrosine	99.28
cd05100	334	PTKc_FGFR3 Catalytic domain of the Protein Tyrosin	99.28
KOG3653|consensus	534		99.28
cd06654	296	STKc_PAK1 Catalytic domain of the Protein Serine/T	99.28
cd05122	253	PKc_STE Catalytic domain of STE family Protein Kin	99.28
cd05576	237	STKc_RPK118_like Catalytic domain of the Protein S	99.28
cd05032	277	PTKc_InsR_like Catalytic domain of Insulin Recepto	99.28
cd06656	297	STKc_PAK3 Catalytic domain of the Protein Serine/T	99.27
cd07855	334	STKc_ERK5 Catalytic domain of the Serine/Threonine	99.27
cd07840	287	STKc_CDK9_like Catalytic domain of Cyclin-Dependen	99.27
cd06615	308	PKc_MEK Catalytic domain of the dual-specificity P	99.27
cd07829	282	STKc_CDK_like Catalytic domain of Cyclin-Dependent	99.27
cd05072	261	PTKc_Lyn Catalytic domain of the Protein Tyrosine	99.27
cd06636	282	STKc_MAP4K4_6 Catalytic domain of the Protein Seri	99.27
cd05061	288	PTKc_InsR Catalytic domain of the Protein Tyrosine	99.27
cd05085	250	PTKc_Fer Catalytic domain of the Protein Tyrosine	99.27
cd07852	337	STKc_MAPK15 Catalytic domain of the Serine/Threoni	99.27
cd08215	258	STKc_Nek Catalytic domain of the Protein Serine/Th	99.27
cd05052	263	PTKc_Abl Catalytic domain of the Protein Tyrosine	99.27
cd05074	273	PTKc_Tyro3 Catalytic domain of the Protein Tyrosin	99.27
cd05063	268	PTKc_EphR_A2 Catalytic domain of the Protein Tyros	99.27
cd05097	295	PTKc_DDR_like Catalytic domain of Discoidin Domain	99.27
cd06639	291	STKc_myosinIIIB Catalytic domain of the Protein Se	99.26
cd08229	267	STKc_Nek7 Catalytic domain of the Protein Serine/T	99.26
cd05043	280	PTK_Ryk Pseudokinase domain of Ryk (Receptor relat	99.26
KOG1164|consensus	322		99.26
cd06655	296	STKc_PAK2 Catalytic domain of the Protein Serine/T	99.26
cd06633	313	STKc_TAO3 Catalytic domain of the Protein Serine/T	99.26
cd05098	307	PTKc_FGFR1 Catalytic domain of the Protein Tyrosin	99.26
cd05577	277	STKc_GRK Catalytic domain of the Protein Serine/Th	99.26
cd06630	268	STKc_MEKK1 Catalytic domain of the Protein Serine/	99.26
cd05060	257	PTKc_Syk_like Catalytic domain of Spleen Tyrosine	99.26
cd08216	314	PK_STRAD Pseudokinase domain of STE20-related kina	99.25
cd07880	343	STKc_p38gamma_MAPK12 Catalytic domain of the Serin	99.25
cd06635	317	STKc_TAO1 Catalytic domain of the Protein Serine/T	99.25
KOG1151|consensus	775		99.25
cd05045	290	PTKc_RET Catalytic domain of the Protein Tyrosine	99.25
cd05095	296	PTKc_DDR2 Catalytic domain of the Protein Tyrosine	99.25
cd06629	272	STKc_MAPKKK_Bck1_like Catalytic domain of fungal B	99.25
cd06622	286	PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS	99.25
cd05148	261	PTKc_Srm_Brk Catalytic domain of the Protein Tyros	99.25
cd05036	277	PTKc_ALK_LTK Catalytic domain of the Protein Tyros	99.25
cd05070	260	PTKc_Fyn_Yrk Catalytic domain of the Protein Tyros	99.25
KOG0670|consensus	752		99.24
cd06610	267	STKc_OSR1_SPAK Catalytic domain of the Protein Ser	99.24
cd06605	265	PKc_MAPKK Catalytic domain of the dual-specificity	99.24
cd05049	280	PTKc_Trk Catalytic domain of the Protein Tyrosine	99.24
KOG1006|consensus	361		99.24
cd05092	280	PTKc_TrkA Catalytic domain of the Protein Tyrosine	99.24
PHA02988	283	hypothetical protein; Provisional	99.24
cd05112	256	PTKc_Itk Catalytic domain of the Protein Tyrosine	99.24
cd08224	267	STKc_Nek6_Nek7 Catalytic domain of the Protein Ser	99.24
cd07851	343	STKc_p38 Catalytic domain of the Serine/Threonine	99.24
cd07846	286	STKc_CDKL2_3 Catalytic domain of the Serine/Threon	99.24
cd05107	401	PTKc_PDGFR_beta Catalytic domain of the Protein Ty	99.23
cd07835	283	STKc_CDK1_like Catalytic domain of Cyclin-Dependen	99.23
cd07864	302	STKc_CDK12 Catalytic domain of the Serine/Threonin	99.23
cd05579	265	STKc_MAST_like Catalytic domain of Microtubule-ass	99.23
cd07860	284	STKc_CDK2_3 Catalytic domain of the Serine/Threoni	99.23
cd06623	264	PKc_MAPKK_plant_like Catalytic domain of Plant dua	99.23
cd05041	251	PTKc_Fes_like Catalytic domain of Fes-like Protein	99.23
cd06631	265	STKc_YSK4 Catalytic domain of the Protein Serine/T	99.23
cd06626	264	STKc_MEKK4 Catalytic domain of the Protein Serine/	99.22
cd05574	316	STKc_phototropin_like Catalytic domain of Phototro	99.22
cd05039	256	PTKc_Csk_like Catalytic domain of C-terminal Src k	99.22
cd06634	308	STKc_TAO2 Catalytic domain of the Protein Serine/T	99.22
cd06917	277	STKc_NAK1_like Catalytic domain of Fungal Nak1-lik	99.22
cd05038	284	PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the P	99.22
cd05073	260	PTKc_Hck Catalytic domain of the Protein Tyrosine	99.22
cd08528	269	STKc_Nek10 Catalytic domain of the Protein Serine/	99.22
cd07854	342	STKc_MAPK4_6 Catalytic domain of the Serine/Threon	99.21
cd06627	254	STKc_Cdc7_like Catalytic domain of Cell division c	99.21
KOG1989|consensus	738		99.21
cd05083	254	PTKc_Chk Catalytic domain of the Protein Tyrosine	99.21
cd05583	288	STKc_MSK_N N-terminal catalytic domain of the Prot	99.21
cd06657	292	STKc_PAK4 Catalytic domain of the Protein Serine/T	99.2
PTZ00024	335	cyclin-dependent protein kinase; Provisional	99.2
cd06642	277	STKc_STK25-YSK1 Catalytic domain of the Protein Se	99.2
cd06647	293	STKc_PAK_I Catalytic domain of the Protein Serine/	99.2
cd05147	190	RIO1_euk RIO kinase family; eukaryotic RIO1, catal	99.2
cd05046	275	PTK_CCK4 Pseudokinase domain of the Protein Tyrosi	99.19
cd05145	190	RIO1_like RIO kinase family; RIO1, RIO3 and simila	99.19
cd05123	250	STKc_AGC Catalytic domain of AGC family Protein Se	99.19
cd05609	305	STKc_MAST Catalytic domain of the Protein Serine/T	99.18
KOG1345|consensus	378		99.18
cd08530	256	STKc_CNK2-like Catalytic domain of the Protein Ser	99.18
cd05034	261	PTKc_Src_like Catalytic domain of Src kinase-like	99.17
cd06614	286	STKc_PAK Catalytic domain of the Protein Serine/Th	99.17
KOG0610|consensus	459		99.17
PF07714	259	Pkinase_Tyr: Protein tyrosine kinase Protein kinas	99.17
cd05067	260	PTKc_Lck_Blk Catalytic domain of the Protein Tyros	99.17
KOG0196|consensus	996		99.17
KOG0576|consensus	829		99.17
cd08218	256	STKc_Nek1 Catalytic domain of the Protein Serine/T	99.16
cd06606	260	STKc_MAPKKK Catalytic domain of the Protein Serine	99.16
cd08227	327	PK_STRAD_alpha Pseudokinase domain of STE20-relate	99.16
PRK12274	218	serine/threonine protein kinase; Provisional	99.16
cd08222	260	STKc_Nek11 Catalytic domain of the Protein Serine/	99.15
cd05050	288	PTKc_Musk Catalytic domain of the Protein Tyrosine	99.14
KOG0194|consensus	474		99.14
cd06640	277	STKc_MST4 Catalytic domain of the Protein Serine/T	99.14
cd06641	277	STKc_MST3 Catalytic domain of the Protein Serine/T	99.13
cd05044	269	PTKc_c-ros Catalytic domain of the Protein Tyrosin	99.13
cd07856	328	STKc_Sty1_Hog1 Catalytic domain of the Serine/Thre	99.13
cd08225	257	STKc_Nek5 Catalytic domain of the Protein Serine/T	99.13
KOG2052|consensus	513		99.09
cd05581	280	STKc_PDK1 Catalytic domain of the Protein Serine/T	99.09
cd06621	287	PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek	99.08
smart00750	176	KIND kinase non-catalytic C-lobe domain. It is an	99.08
smart00220	244	S_TKc Serine/Threonine protein kinases, catalytic	99.08
cd06620	284	PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr	99.07
KOG1095|consensus	1025		99.04
KOG0590|consensus	601		99.04
COG0515	384	SPS1 Serine/threonine protein kinase [General func	99.03
KOG0200|consensus	609		99.02
KOG1026|consensus	774		99.02
KOG1167|consensus	418		99.0
cd08226	328	PK_STRAD_beta Pseudokinase domain of STE20-related	99.0
KOG1094|consensus	807		98.98
smart00221	225	STYKc Protein kinase; unclassified specificity. Ph	98.97
cd00180	215	PKc Catalytic domain of Protein Kinases. Protein K	98.95
smart00090	237	RIO RIO-like kinase.	98.92
KOG1025|consensus	1177		98.91
KOG4278|consensus	1157		98.91
PRK01723	239	3-deoxy-D-manno-octulosonic-acid kinase; Reviewed	98.85
cd05144	198	RIO2_C RIO kinase family; RIO2, C-terminal catalyt	98.84
cd05119	187	RIO RIO kinase family, catalytic domain. The RIO k	98.81
PRK10345	210	hypothetical protein; Provisional	98.79
KOG0199|consensus	1039		98.77
KOG2345|consensus	302		98.76
KOG4158|consensus	598		98.72
PLN00113	968	leucine-rich repeat receptor-like protein kinase;	98.69
PRK09605	535	bifunctional UGMP family protein/serine/threonine	98.69
PRK14879	211	serine/threonine protein kinase; Provisional	98.66
TIGR03724	199	arch_bud32 Kae1-associated kinase Bud32. Members o	98.63
PRK10359	232	lipopolysaccharide core biosynthesis protein; Prov	98.55
KOG1033|consensus	516		98.54
KOG0603|consensus	612		98.52
KOG0606|consensus	1205		98.51
KOG1024|consensus	563		98.33
PF14531	288	Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_	98.28
KOG1166|consensus	974		98.28
cd05146	197	RIO3_euk RIO kinase family; eukaryotic RIO3, catal	98.28
KOG1290|consensus	590		98.2
PF06293	206	Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family;	98.18
cd05120	155	APH_ChoK_like Aminoglycoside 3'-phosphotransferase	98.17
COG3642	204	Mn2+-dependent serine/threonine protein kinase [Si	98.09
cd05151	170	ChoK Choline Kinase (ChoK). The ChoK subfamily is	98.01
PRK15123	268	lipopolysaccharide core heptose(I) kinase RfaP; Pr	97.99
TIGR01982	437	UbiB 2-polyprenylphenol 6-hydroxylase. This model	97.98
KOG0590|consensus	601		97.96
KOG3087|consensus	229		97.87
KOG1240|consensus	1431		97.76
PF01163	188	RIO1: RIO1 family; InterPro: IPR018934 Protein pho	97.63
PF06176	229	WaaY: Lipopolysaccharide core biosynthesis protein	97.46
PRK04750	537	ubiB putative ubiquinone biosynthesis protein UbiB	97.18
PRK09902	216	hypothetical protein; Provisional	97.07
COG4248	637	Uncharacterized protein with protein kinase and he	96.08
COG0478	304	RIO-like serine/threonine protein kinase fused to	96.05
KOG3741|consensus	655		94.94
COG1718	268	RIO1 Serine/threonine protein kinase involved in c	94.87
cd05154	223	ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 an	94.74
KOG1243|consensus	690		94.34
KOG1023|consensus	484		94.18
KOG0601|consensus	524		94.09
COG0661	517	AarF Predicted unusual protein kinase [General fun	94.08
PRK05231	319	homoserine kinase; Provisional	94.05
cd05157	235	ETNK_euk Ethanolamine kinase (ETNK) in eukaryotes.	93.81
KOG0601|consensus	524		93.62
TIGR02906	313	spore_CotS spore coat protein, CotS family. Member	93.24
cd05155	235	APH_ChoK_like_1 Uncharacterized bacterial proteins	93.22
TIGR00938	307	thrB_alt homoserine kinase, Neisseria type. Homose	93.08
COG0510	269	ycfN Thiamine kinase and related kinases [Coenzyme	93.0
PF01636	239	APH: Phosphotransferase enzyme family This family	92.96
cd05156	302	ChoK_euk Choline Kinase (ChoK) in eukaryotes. The	92.96
cd05150	244	APH Aminoglycoside 3'-phosphotransferase (APH). Th	92.82
cd05153	296	HomoserineK_II Homoserine Kinase, type II. Homoser	92.78
PLN02236	344	choline kinase	92.65
COG5072	488	ALK1 Serine/threonine kinase of the haspin family	92.63
PRK10271	188	thiK thiamine kinase; Provisional	92.37
TIGR02721	256	ycfN_thiK thiamine kinase. Members of this family	92.02
TIGR02172	226	Fb_sc_TIGR02172 Fibrobacter succinogenes paralogou	91.87
PF01633	211	Choline_kinase: Choline/ethanolamine kinase; Inter	91.78
smart00587	196	CHK ZnF_C4 abd HLH domain containing kinases domai	91.46
PLN02421	330	phosphotransferase, alcohol group as acceptor/kina	91.39
KOG2137|consensus	700		91.16
KOG1266|consensus	458		90.99
KOG1235|consensus	538		90.8
PF13095	207	FTA2: Kinetochore Sim4 complex subunit FTA2	90.73
KOG2268|consensus	465		90.45
PF10707	199	YrbL-PhoP_reg: PhoP regulatory network protein Yrb	90.24
COG2334	331	Putative homoserine kinase type II (protein kinase	90.19
PRK06148	1013	hypothetical protein; Provisional	89.85
PRK06149	972	hypothetical protein; Provisional	89.51
PRK09550	401	mtnK methylthioribose kinase; Reviewed	89.12
PF12260	188	PIP49_C: Protein-kinase domain of FAM69; InterPro:	88.85
cd05152	276	MPH2' Macrolide 2'-Phosphotransferase (MPH2'). MPH	88.67
COG3173	321	Predicted aminoglycoside phosphotransferase [Gener	88.09
PHA03111	444	Ser/Thr kinase; Provisional	87.72
TIGR01767	370	MTRK 5-methylthioribose kinase. This enzyme is inv	87.31
PF02958	294	EcKinase: Ecdysteroid kinase; InterPro: IPR004119	87.24
TIGR02904	309	spore_ysxE spore coat protein YsxE. Members of thi	86.61
PF05445	434	Pox_ser-thr_kin: Poxvirus serine/threonine protein	85.98
PRK11768	325	serine/threonine protein kinase; Provisional	84.15
PRK12396	409	5-methylribose kinase; Reviewed	83.44

>KOG0595|consensus

Probab=99.86  E-value=3.9e-22  Score=125.24  Aligned_cols=82  Identities=23%  Similarity=0.415  Sum_probs=70.7

Q ss_pred             hHHHHHhhhcH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCC---CcEEEEeeccceecCCCcccccc
Q psy8010           3 NFIITLVARIP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPD---CDVKLCDFGISRHLSRDVDVREI   78 (87)
Q Consensus         3 ~~~~~~~~~~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~---~~~kl~dfg~~~~~~~~~~~~~~   78 (87)
                      .|++... +++ ..++.++.|+..|+  .++|+++|+|||+||+||+++....+   ..+|++|||+|+.+.++....+.
T Consensus        98 ~yi~~~~-~l~e~t~r~Fm~QLA~al--q~L~~~~IiHRDLKPQNiLLs~~~~~~~~~~LKIADFGfAR~L~~~~~a~tl  174 (429)
T KOG0595|consen   98 DYIRRRG-RLPEATARHFMQQLASAL--QFLHENNIIHRDLKPQNILLSTTARNDTSPVLKIADFGFARFLQPGSMAETL  174 (429)
T ss_pred             HHHHHcC-CCCHHHHHHHHHHHHHHH--HHHHHCCeeeccCCcceEEeccCCCCCCCceEEecccchhhhCCchhHHHHh
Confidence            4555444 445 58999999999999  99999999999999999999986222   56999999999999888888999


Q ss_pred             ccccccccC
Q psy8010          79 LGTPDYVGE   87 (87)
Q Consensus        79 ~gt~~y~aP   87 (87)
                      ||||.||||
T Consensus       175 cGSplYMAP  183 (429)
T KOG0595|consen  175 CGSPLYMAP  183 (429)
T ss_pred             hCCccccCH
Confidence            999999998

>KOG0615|consensus

Probab=99.84  E-value=3.1e-21  Score=121.62  Aligned_cols=72  Identities=24%  Similarity=0.487  Sum_probs=66.9

Q ss_pred             HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCccccccccccccccC
Q psy8010          14 RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDVDVREILGTPDYVGE   87 (87)
Q Consensus        14 ~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~~~~~~~gt~~y~aP   87 (87)
                      ...+.+++|++.|+  .|+|++||+|||+||+||++..+.+...+|++|||+|+....+....+.||||.|.||
T Consensus       276 d~~K~~f~Qll~av--kYLH~~GI~HRDiKPeNILl~~~~e~~llKItDFGlAK~~g~~sfm~TlCGTpsYvAP  347 (475)
T KOG0615|consen  276 DLGKLLFKQLLTAV--KYLHSQGIIHRDIKPENILLSNDAEDCLLKITDFGLAKVSGEGSFMKTLCGTPSYVAP  347 (475)
T ss_pred             chhHHHHHHHHHHH--HHHHHcCcccccCCcceEEeccCCcceEEEecccchhhccccceehhhhcCCccccCh
Confidence            36789999999999  9999999999999999999998766788999999999998888888999999999998

>KOG0598|consensus

Probab=99.84  E-value=4.5e-21  Score=119.03  Aligned_cols=78  Identities=19%  Similarity=0.352  Sum_probs=67.9

Q ss_pred             HHHHhhhcHH-HHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceec-CCCcccccccccc
Q psy8010           5 IITLVARIPR-LVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHL-SRDVDVREILGTP   82 (87)
Q Consensus         5 ~~~~~~~~~~-~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~-~~~~~~~~~~gt~   82 (87)
                      ..+-.++|+| .++.++.+++.|+  .|+|++||+|||+||+||+++.+   +++++.|||+++.. ..+....+.|||+
T Consensus       115 hL~~eg~F~E~~arfYlaEi~lAL--~~LH~~gIiyRDlKPENILLd~~---GHi~LtDFgL~k~~~~~~~~t~tfcGT~  189 (357)
T KOG0598|consen  115 HLQREGRFSEDRARFYLAEIVLAL--GYLHSKGIIYRDLKPENILLDEQ---GHIKLTDFGLCKEDLKDGDATRTFCGTP  189 (357)
T ss_pred             HHHhcCCcchhHHHHHHHHHHHHH--HHHHhCCeeeccCCHHHeeecCC---CcEEEeccccchhcccCCCccccccCCc
Confidence            3445567885 6999999999999  99999999999999999999996   89999999999965 4445667789999


Q ss_pred             ccccC
Q psy8010          83 DYVGE   87 (87)
Q Consensus        83 ~y~aP   87 (87)
                      .||||
T Consensus       190 eYmAP  194 (357)
T KOG0598|consen  190 EYMAP  194 (357)
T ss_pred             cccCh
Confidence            99998

>KOG0583|consensus

Probab=99.84  E-value=6.2e-21  Score=120.81  Aligned_cols=81  Identities=22%  Similarity=0.463  Sum_probs=71.4

Q ss_pred             hhHHHHHhhhcH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceec-CCCccccccc
Q psy8010           2 TNFIITLVARIP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHL-SRDVDVREIL   79 (87)
Q Consensus         2 ~~~~~~~~~~~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~-~~~~~~~~~~   79 (87)
                      .+++.+ .++++ ++++.+++|++.|+  .|||++|++|||+||+|++++.+  ...+|++|||++... ..+....+.|
T Consensus       108 ~~~i~~-~g~l~E~~ar~~F~Qlisav--~y~H~~gi~HRDLK~ENilld~~--~~~~Kl~DFG~s~~~~~~~~~l~t~c  182 (370)
T KOG0583|consen  108 FDYIVN-KGRLKEDEARKYFRQLISAV--AYCHSRGIVHRDLKPENILLDGN--EGNLKLSDFGLSAISPGEDGLLKTFC  182 (370)
T ss_pred             HHHHHH-cCCCChHHHHHHHHHHHHHH--HHHHhCCEeeCCCCHHHEEecCC--CCCEEEeccccccccCCCCCcccCCC
Confidence            356666 66777 48999999999999  99999999999999999999985  278999999999987 5667788999


Q ss_pred             cccccccC
Q psy8010          80 GTPDYVGE   87 (87)
Q Consensus        80 gt~~y~aP   87 (87)
                      |||.|+||
T Consensus       183 Gsp~Y~aP  190 (370)
T KOG0583|consen  183 GSPAYAAP  190 (370)
T ss_pred             CCcccCCH
Confidence            99999998

>KOG0616|consensus

Probab=99.82  E-value=1.7e-20  Score=114.55  Aligned_cols=73  Identities=21%  Similarity=0.398  Sum_probs=66.0

Q ss_pred             HhhhcH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCcccccccccccccc
Q psy8010           8 LVARIP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDVDVREILGTPDYVG   86 (87)
Q Consensus         8 ~~~~~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~~~~~~~gt~~y~a   86 (87)
                      ..++|+ ..++.++.|++.|+  +|+|+.++++||+||+|++++++   +.+|+.|||+|+.+..  ...+.||||.|+|
T Consensus       137 k~~rF~e~~arFYAAeivlAl--eylH~~~iiYRDLKPENiLlD~~---G~iKitDFGFAK~v~~--rT~TlCGTPeYLA  209 (355)
T KOG0616|consen  137 KSGRFSEPHARFYAAEIVLAL--EYLHSLDIIYRDLKPENLLLDQN---GHIKITDFGFAKRVSG--RTWTLCGTPEYLA  209 (355)
T ss_pred             hcCCCCchhHHHHHHHHHHHH--HHHHhcCeeeccCChHHeeeccC---CcEEEEeccceEEecC--cEEEecCCccccC
Confidence            345788 48999999999999  99999999999999999999995   8999999999998754  3788999999999


Q ss_pred             C
Q psy8010          87 E   87 (87)
Q Consensus        87 P   87 (87)
                      |
T Consensus       210 P  210 (355)
T KOG0616|consen  210 P  210 (355)
T ss_pred             h
Confidence            8

>KOG0575|consensus

Probab=99.82  E-value=1.1e-20  Score=123.09  Aligned_cols=75  Identities=19%  Similarity=0.336  Sum_probs=67.4

Q ss_pred             HhhhcHH-HHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecC-CCccccccccccccc
Q psy8010           8 LVARIPR-LVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLS-RDVDVREILGTPDYV   85 (87)
Q Consensus         8 ~~~~~~~-~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~-~~~~~~~~~gt~~y~   85 (87)
                      ..+.+.| +++++++|++.|+  .|+|+++|+|||+|..|++++.+   -.+||.|||+|..+. +++...+.||||.|+
T Consensus       111 rrk~ltEpEary~l~QIv~Gl--kYLH~~~IiHRDLKLGNlfL~~~---~~VKIgDFGLAt~le~~~Erk~TlCGTPNYI  185 (592)
T KOG0575|consen  111 RRKPLTEPEARYFLRQIVEGL--KYLHSLGIIHRDLKLGNLFLNEN---MNVKIGDFGLATQLEYDGERKKTLCGTPNYI  185 (592)
T ss_pred             hcCCCCcHHHHHHHHHHHHHH--HHHHhcCceecccchhheeecCc---CcEEecccceeeeecCcccccceecCCCccc
Confidence            4445564 8999999999999  99999999999999999999995   789999999999886 457788999999999


Q ss_pred             cC
Q psy8010          86 GE   87 (87)
Q Consensus        86 aP   87 (87)
                      ||
T Consensus       186 AP  187 (592)
T KOG0575|consen  186 AP  187 (592)
T ss_pred             Ch
Confidence            98

>KOG0593|consensus

Probab=99.82  E-value=1.3e-20  Score=115.66  Aligned_cols=69  Identities=32%  Similarity=0.493  Sum_probs=64.7

Q ss_pred             HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecC-CCccccccccccccccC
Q psy8010          14 RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLS-RDVDVREILGTPDYVGE   87 (87)
Q Consensus        14 ~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~-~~~~~~~~~gt~~y~aP   87 (87)
                      +.++.+++|++.|+  .|||+++++|||+||+||+++.+   +.+|++|||+|+.+. ++..+++++.|.||+||
T Consensus       101 ~~vk~~l~Q~l~ai--~~cHk~n~IHRDIKPENILit~~---gvvKLCDFGFAR~L~~pgd~YTDYVATRWYRaP  170 (396)
T KOG0593|consen  101 ELVKKYLYQLLKAI--HFCHKNNCIHRDIKPENILITQN---GVVKLCDFGFARTLSAPGDNYTDYVATRWYRAP  170 (396)
T ss_pred             HHHHHHHHHHHHHh--hhhhhcCeecccCChhheEEecC---CcEEeccchhhHhhcCCcchhhhhhhhhhccCh
Confidence            57999999999999  99999999999999999999996   789999999999987 67777899999999998

>KOG0661|consensus

Probab=99.82  E-value=2e-20  Score=119.60  Aligned_cols=78  Identities=18%  Similarity=0.341  Sum_probs=69.6

Q ss_pred             HHHHhhhcH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCccccccccccc
Q psy8010           5 IITLVARIP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDVDVREILGTPD   83 (87)
Q Consensus         5 ~~~~~~~~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~~~~~~~gt~~   83 (87)
                      +++-...|+ +.++.++.|++.||  .|+|.+|+.|||+||+||++...   --+|++|||+||.+.....++.|+-|.|
T Consensus       100 mK~R~r~fse~~irnim~QilqGL--~hiHk~GfFHRDlKPENiLi~~~---~~iKiaDFGLARev~SkpPYTeYVSTRW  174 (538)
T KOG0661|consen  100 MKDRNRLFSESDIRNIMYQILQGL--AHIHKHGFFHRDLKPENILISGN---DVIKIADFGLAREVRSKPPYTEYVSTRW  174 (538)
T ss_pred             HhhcCCcCCHHHHHHHHHHHHHHH--HHHHhcCcccccCChhheEeccc---ceeEecccccccccccCCCcchhhhccc
Confidence            444444566 48999999999999  99999999999999999999964   5799999999999988888999999999


Q ss_pred             cccC
Q psy8010          84 YVGE   87 (87)
Q Consensus        84 y~aP   87 (87)
                      |+||
T Consensus       175 YRAP  178 (538)
T KOG0661|consen  175 YRAP  178 (538)
T ss_pred             ccch
Confidence            9998

>KOG0599|consensus

Probab=99.82  E-value=2e-20  Score=113.97  Aligned_cols=69  Identities=22%  Similarity=0.516  Sum_probs=66.2

Q ss_pred             HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCccccccccccccccC
Q psy8010          14 RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDVDVREILGTPDYVGE   87 (87)
Q Consensus        14 ~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~~~~~~~gt~~y~aP   87 (87)
                      ++++.+++|++.++  .|+|..+|+|||+||+||+++.+   -.++++|||+++.+.++...+..||||.|.||
T Consensus       123 K~tR~iMrqlfegV--eylHa~~IVHRDLKpENILlddn---~~i~isDFGFa~~l~~GekLrelCGTPgYLAP  191 (411)
T KOG0599|consen  123 KETRRIMRQLFEGV--EYLHARNIVHRDLKPENILLDDN---MNIKISDFGFACQLEPGEKLRELCGTPGYLAP  191 (411)
T ss_pred             HHHHHHHHHHHHHH--HHHHHhhhhhcccChhheeeccc---cceEEeccceeeccCCchhHHHhcCCCcccCh
Confidence            57999999999999  99999999999999999999985   88999999999999999999999999999998

>KOG0594|consensus

Probab=99.81  E-value=5.3e-20  Score=113.64  Aligned_cols=69  Identities=29%  Similarity=0.393  Sum_probs=62.3

Q ss_pred             HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecC-CCccccccccccccccC
Q psy8010          14 RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLS-RDVDVREILGTPDYVGE   87 (87)
Q Consensus        14 ~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~-~~~~~~~~~gt~~y~aP   87 (87)
                      ..++.+++|++.|+  .|||+++|+|||+||+|++++..   +.+|++|||+|+.+. +.......++|.+|+||
T Consensus       120 ~~ik~~m~Qll~gl--~~~H~~~IlHRDLKPQNlLi~~~---G~lKlaDFGlAra~~ip~~~yt~evvTlWYRaP  189 (323)
T KOG0594|consen  120 RLIKSFMRQLLRGL--AFLHSHGILHRDLKPQNLLISSS---GVLKLADFGLARAFSIPMRTYTPEVVTLWYRAP  189 (323)
T ss_pred             HHHHHHHHHHHHHH--HHHHhCCeecccCCcceEEECCC---CcEeeeccchHHHhcCCcccccccEEEeeccCH
Confidence            57999999999999  99999999999999999999995   889999999999775 44446778999999998

>KOG0581|consensus

Probab=99.80  E-value=6.4e-20  Score=114.07  Aligned_cols=72  Identities=28%  Similarity=0.574  Sum_probs=64.5

Q ss_pred             hhcHH-HHHHHHHHHHHHHHHHHhhh-CCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCccccccccccccccC
Q psy8010          10 ARIPR-LVAKVTVTLLGSLNHHFTST-HSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDVDVREILGTPDYVGE   87 (87)
Q Consensus        10 ~~~~~-~~~~~~~q~~~~l~~~~~h~-~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~~~~~~~gt~~y~aP   87 (87)
                      ++++| ...+++.+++.||  .|+|. ++|+|||+||.|++++..   +++|++|||.+..+.+. -..+++||..||||
T Consensus       173 g~i~E~~L~~ia~~VL~GL--~YLh~~~~IIHRDIKPsNlLvNsk---GeVKicDFGVS~~lvnS-~a~tfvGT~~YMsP  246 (364)
T KOG0581|consen  173 GRIPEPVLGKIARAVLRGL--SYLHEERKIIHRDIKPSNLLVNSK---GEVKICDFGVSGILVNS-IANTFVGTSAYMSP  246 (364)
T ss_pred             CCCCHHHHHHHHHHHHHHH--HHHhhccCeeeccCCHHHeeeccC---CCEEeccccccHHhhhh-hcccccccccccCh
Confidence            56885 7899999999999  99995 999999999999999995   89999999999887655 45788999999998

>KOG0658|consensus

Probab=99.78  E-value=2.1e-19  Score=111.64  Aligned_cols=73  Identities=23%  Similarity=0.403  Sum_probs=66.9

Q ss_pred             hcH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCccccccccccccccC
Q psy8010          11 RIP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDVDVREILGTPDYVGE   87 (87)
Q Consensus        11 ~~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~~~~~~~gt~~y~aP   87 (87)
                      +++ -.++.+.+|++.|+  .|+|+.||+|||+||+|++++.+  ++.+|++|||-|+.+..++....+..|.+|+||
T Consensus       121 ~mp~~~iKLYt~Qlfrgl--~yLh~~~IcHRDIKPqNlLvD~~--tg~LKicDFGSAK~L~~~epniSYicSRyYRaP  194 (364)
T KOG0658|consen  121 RMPLLEIKLYTYQLFRGL--AYLHSHGICHRDIKPQNLLVDPD--TGVLKICDFGSAKVLVKGEPNISYICSRYYRAP  194 (364)
T ss_pred             CCceeeeHHHHHHHHHHH--HHHHhcCcccCCCChheEEEcCC--CCeEEeccCCcceeeccCCCceeEEEeccccCH
Confidence            344 36899999999999  99999999999999999999987  688999999999999888888899999999998

>KOG0592|consensus

Probab=99.77  E-value=5.8e-19  Score=114.34  Aligned_cols=74  Identities=20%  Similarity=0.407  Sum_probs=63.5

Q ss_pred             hhhcHH-HHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCc------------cc
Q psy8010           9 VARIPR-LVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDV------------DV   75 (87)
Q Consensus         9 ~~~~~~-~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~------------~~   75 (87)
                      .+.|.+ +++.|+.|++.++  +|+|+.||||||+||+|||++.+   ..++|.|||.|+.+.+..            ..
T Consensus       168 ~Gsfde~caR~YAAeIldAl--eylH~~GIIHRDlKPENILLd~d---mhikITDFGsAK~l~~~~~~~~~~~~~~~a~s  242 (604)
T KOG0592|consen  168 YGSFDETCARFYAAEILDAL--EYLHSNGIIHRDLKPENILLDKD---GHIKITDFGSAKILSPSQKSQENPVDPNQASS  242 (604)
T ss_pred             hCcchHHHHHHHHHHHHHHH--HHHHhcCceeccCChhheeEcCC---CcEEEeeccccccCChhhccccCccCcccccC
Confidence            366775 8999999999999  99999999999999999999995   899999999999773321            11


Q ss_pred             --cccccccccccC
Q psy8010          76 --REILGTPDYVGE   87 (87)
Q Consensus        76 --~~~~gt~~y~aP   87 (87)
                        ..++||..|++|
T Consensus       243 ~~~SFVGTAeYVSP  256 (604)
T KOG0592|consen  243 RRSSFVGTAEYVSP  256 (604)
T ss_pred             cccceeeeecccCH
Confidence              458999999987

>KOG0611|consensus

Probab=99.76  E-value=6.1e-19  Score=112.22  Aligned_cols=80  Identities=16%  Similarity=0.317  Sum_probs=70.8

Q ss_pred             hHHHHHhhhcHHHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCcccccccccc
Q psy8010           3 NFIITLVARIPRLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDVDVREILGTP   82 (87)
Q Consensus         3 ~~~~~~~~~~~~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~~~~~~~gt~   82 (87)
                      +|+......-.++++.+++|+++++  .|||.++++|||+|.+||+++.+   +.+|++|||++..+.++..+.++||+|
T Consensus       142 DYiSer~~LsErEaRhfFRQIvSAV--hYCHknrVvHRDLKLENILLD~N---~NiKIADFGLSNly~~~kfLqTFCGSP  216 (668)
T KOG0611|consen  142 DYISERGSLSEREARHFFRQIVSAV--HYCHKNRVVHRDLKLENILLDQN---NNIKIADFGLSNLYADKKFLQTFCGSP  216 (668)
T ss_pred             HHHHHhccccHHHHHHHHHHHHHHH--HHHhhccceecccchhheeecCC---CCeeeeccchhhhhccccHHHHhcCCc
Confidence            4555444333368999999999999  99999999999999999999995   899999999999998888899999999


Q ss_pred             ccccC
Q psy8010          83 DYVGE   87 (87)
Q Consensus        83 ~y~aP   87 (87)
                      .|.+|
T Consensus       217 LYASP  221 (668)
T KOG0611|consen  217 LYASP  221 (668)
T ss_pred             ccCCc
Confidence            99987

>KOG0660|consensus

Probab=99.76  E-value=5.3e-19  Score=109.74  Aligned_cols=69  Identities=28%  Similarity=0.512  Sum_probs=63.0

Q ss_pred             HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCC---CccccccccccccccC
Q psy8010          14 RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSR---DVDVREILGTPDYVGE   87 (87)
Q Consensus        14 ~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~---~~~~~~~~gt~~y~aP   87 (87)
                      +.++.+++|++.|+  .|+|+.+++|||+||.|++++.+   +.+|++|||+|+....   +...+.++-|.||+||
T Consensus       125 ~H~q~f~YQiLrgL--KyiHSAnViHRDLKPsNll~n~~---c~lKI~DFGLAR~~~~~~~~~~mTeYVaTRWYRAP  196 (359)
T KOG0660|consen  125 DHAQYFLYQILRGL--KYIHSANVIHRDLKPSNLLLNAD---CDLKICDFGLARYLDKFFEDGFMTEYVATRWYRAP  196 (359)
T ss_pred             HHHHHHHHHHHHhc--chhhcccccccccchhheeeccC---CCEEeccccceeeccccCcccchhcceeeeeecCH
Confidence            68999999999999  99999999999999999999995   8999999999998753   4455789999999998

>KOG0591|consensus

Probab=99.76  E-value=6.9e-19  Score=107.36  Aligned_cols=74  Identities=32%  Similarity=0.445  Sum_probs=63.9

Q ss_pred             hhhcHH-HHHHHHHHHHHHHHHHHhhh--CC--ceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCccc-ccccccc
Q psy8010           9 VARIPR-LVAKVTVTLLGSLNHHFTST--HS--LYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDVDV-REILGTP   82 (87)
Q Consensus         9 ~~~~~~-~~~~~~~q~~~~l~~~~~h~--~~--~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~~~-~~~~gt~   82 (87)
                      .++++| .+.+++.|++.|+  ..||.  ..  ++|||+||.|++++.+   +.+|+.|||+++.+....+. ..++|||
T Consensus       118 kr~ipE~~Vwk~f~QL~~AL--~~cH~~~~r~~VmHRDIKPaNIFl~~~---gvvKLGDfGL~r~l~s~~tfA~S~VGTP  192 (375)
T KOG0591|consen  118 KRLIPEKTVWKYFVQLCRAL--YHCHSKIPRGTVMHRDIKPANIFLTAN---GVVKLGDFGLGRFLSSKTTFAHSLVGTP  192 (375)
T ss_pred             cccCchHHHHHHHHHHHHHH--HHHhccccccceeeccCcchheEEcCC---CceeeccchhHhHhcchhHHHHhhcCCC
Confidence            345664 7999999999999  99998  44  9999999999999985   78999999999988665544 5789999


Q ss_pred             ccccC
Q psy8010          83 DYVGE   87 (87)
Q Consensus        83 ~y~aP   87 (87)
                      +||||
T Consensus       193 yYMSP  197 (375)
T KOG0591|consen  193 YYMSP  197 (375)
T ss_pred             cccCH
Confidence            99998

>KOG0198|consensus

Probab=99.75  E-value=4.4e-18  Score=105.61  Aligned_cols=80  Identities=28%  Similarity=0.519  Sum_probs=64.9

Q ss_pred             HHHHHhhhcH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCC----Ccccccc
Q psy8010           4 FIITLVARIP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSR----DVDVREI   78 (87)
Q Consensus         4 ~~~~~~~~~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~----~~~~~~~   78 (87)
                      ++....+.++ ..++.+.+|++.++  .|+|++|++|+|+|+.|+++...  +..+|++|||++.....    .......
T Consensus       106 ~~~~~g~~l~E~~v~~ytr~iL~GL--~ylHs~g~vH~DiK~~NiLl~~~--~~~~KlaDFG~a~~~~~~~~~~~~~~~~  181 (313)
T KOG0198|consen  106 LIKRYGGKLPEPLVRRYTRQILEGL--AYLHSKGIVHCDIKPANILLDPS--NGDVKLADFGLAKKLESKGTKSDSELSV  181 (313)
T ss_pred             HHHHcCCCCCHHHHHHHHHHHHHHH--HHHHhCCEeccCcccceEEEeCC--CCeEEeccCccccccccccccccccccc
Confidence            3333333567 48999999999999  99999999999999999999983  26899999999987653    1123457


Q ss_pred             ccccccccC
Q psy8010          79 LGTPDYVGE   87 (87)
Q Consensus        79 ~gt~~y~aP   87 (87)
                      .|||.||||
T Consensus       182 ~Gtp~~maP  190 (313)
T KOG0198|consen  182 QGTPNYMAP  190 (313)
T ss_pred             cCCccccCc
Confidence            999999998

>KOG0694|consensus

Probab=99.74  E-value=2.4e-18  Score=113.54  Aligned_cols=74  Identities=19%  Similarity=0.309  Sum_probs=66.7

Q ss_pred             hhhcHH-HHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceec-CCCcccccccccccccc
Q psy8010           9 VARIPR-LVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHL-SRDVDVREILGTPDYVG   86 (87)
Q Consensus         9 ~~~~~~-~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~-~~~~~~~~~~gt~~y~a   86 (87)
                      .+.|++ .++.|+.+++.||  .|+|++||++||+|.+|++++..   +.+|++|||+++.- ..+....++||||.|||
T Consensus       462 ~~~F~e~rarfyaAev~l~L--~fLH~~~IIYRDlKLdNiLLD~e---Gh~kiADFGlcKe~m~~g~~TsTfCGTpey~a  536 (694)
T KOG0694|consen  462 TDVFSEPRARFYAAEVVLGL--QFLHENGIIYRDLKLDNLLLDTE---GHVKIADFGLCKEGMGQGDRTSTFCGTPEFLA  536 (694)
T ss_pred             cccccHHHHHHHHHHHHHHH--HHHHhcCceeeecchhheEEccc---CcEEecccccccccCCCCCccccccCChhhcC
Confidence            356674 7999999999999  99999999999999999999996   89999999999964 46667889999999999


Q ss_pred             C
Q psy8010          87 E   87 (87)
Q Consensus        87 P   87 (87)
                      |
T Consensus       537 P  537 (694)
T KOG0694|consen  537 P  537 (694)
T ss_pred             h
Confidence            8

>KOG0600|consensus

Probab=99.74  E-value=2.6e-18  Score=110.63  Aligned_cols=72  Identities=15%  Similarity=0.222  Sum_probs=63.4

Q ss_pred             hcH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCc--cccccccccccccC
Q psy8010          11 RIP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDV--DVREILGTPDYVGE   87 (87)
Q Consensus        11 ~~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~--~~~~~~gt~~y~aP   87 (87)
                      +|+ .++++++.|++.|+  .|||++|++|||+|..|+|++.+   +.+|++|||+|+.+....  .++..+-|.||++|
T Consensus       214 kft~~qIKc~mkQLl~Gl--~~cH~~gvlHRDIK~SNiLidn~---G~LKiaDFGLAr~y~~~~~~~~T~rVvTLWYRpP  288 (560)
T KOG0600|consen  214 KFTEPQIKCYMKQLLEGL--EYCHSRGVLHRDIKGSNILIDNN---GVLKIADFGLARFYTPSGSAPYTSRVVTLWYRPP  288 (560)
T ss_pred             ccChHHHHHHHHHHHHHH--HHHhhcCeeeccccccceEEcCC---CCEEeccccceeeccCCCCcccccceEEeeccCh
Confidence            455 48999999999999  99999999999999999999996   889999999999774433  45667889999998

>KOG0659|consensus

Probab=99.72  E-value=7.4e-18  Score=101.90  Aligned_cols=78  Identities=17%  Similarity=0.273  Sum_probs=64.8

Q ss_pred             HHHHhhhcH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCccc-ccccccc
Q psy8010           5 IITLVARIP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDVDV-REILGTP   82 (87)
Q Consensus         5 ~~~~~~~~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~~~-~~~~gt~   82 (87)
                      +++...-++ ..++.++.+++.|+  .|||++.++|||+||.|++++.+   +.+|++|||+++.+...... ..-+-|.
T Consensus        91 Ikd~~i~l~pa~iK~y~~m~LkGl--~y~H~~~IlHRDlKPnNLLis~~---g~lKiADFGLAr~f~~p~~~~~~~V~TR  165 (318)
T KOG0659|consen   91 IKDKNIILSPADIKSYMLMTLKGL--AYCHSKWILHRDLKPNNLLISSD---GQLKIADFGLARFFGSPNRIQTHQVVTR  165 (318)
T ss_pred             hcccccccCHHHHHHHHHHHHHHH--HHHHhhhhhcccCCccceEEcCC---CcEEeecccchhccCCCCcccccceeee
Confidence            444444444 68999999999999  99999999999999999999995   88999999999988544433 2338899


Q ss_pred             ccccC
Q psy8010          83 DYVGE   87 (87)
Q Consensus        83 ~y~aP   87 (87)
                      ||+||
T Consensus       166 WYRAP  170 (318)
T KOG0659|consen  166 WYRAP  170 (318)
T ss_pred             eccCh
Confidence            99998

>KOG0578|consensus

Probab=99.71  E-value=2.1e-17  Score=107.22  Aligned_cols=69  Identities=25%  Similarity=0.448  Sum_probs=62.4

Q ss_pred             HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCc-cccccccccccccC
Q psy8010          14 RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDV-DVREILGTPDYVGE   87 (87)
Q Consensus        14 ~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~-~~~~~~gt~~y~aP   87 (87)
                      .++..++++++.||  .|+|.+||+|||+|..|++++.+   +.+|+.|||++..+.... .-.+.+|||+||||
T Consensus       369 ~qIA~Icre~l~aL--~fLH~~gIiHrDIKSDnILL~~~---g~vKltDFGFcaqi~~~~~KR~TmVGTPYWMAP  438 (550)
T KOG0578|consen  369 GQIAAICREILQGL--KFLHARGIIHRDIKSDNILLTMD---GSVKLTDFGFCAQISEEQSKRSTMVGTPYWMAP  438 (550)
T ss_pred             HHHHHHHHHHHHHH--HHHHhcceeeeccccceeEeccC---CcEEEeeeeeeeccccccCccccccCCCCccch
Confidence            47899999999999  99999999999999999999996   779999999998876554 44678999999998

>KOG0033|consensus

Probab=99.71  E-value=2.5e-17  Score=99.29  Aligned_cols=71  Identities=23%  Similarity=0.420  Sum_probs=63.7

Q ss_pred             HHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCccccccccccccccC
Q psy8010          15 LVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDVDVREILGTPDYVGE   87 (87)
Q Consensus        15 ~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~~~~~~~gt~~y~aP   87 (87)
                      .+..+++|++.++  .|||..+|+|||++|.|+++........+|++|||++..+..+.--...+|||.||||
T Consensus       111 ~aSH~~rQiLeal--~yCH~n~IvHRDvkP~nllLASK~~~A~vKL~~FGvAi~l~~g~~~~G~~GtP~fmaP  181 (355)
T KOG0033|consen  111 DASHCIQQILEAL--AYCHSNGIVHRDLKPENLLLASKAKGAAVKLADFGLAIEVNDGEAWHGFAGTPGYLSP  181 (355)
T ss_pred             HHHHHHHHHHHHH--HHHHhcCceeccCChhheeeeeccCCCceeecccceEEEeCCccccccccCCCcccCH
Confidence            5788899999999  9999999999999999999987765678999999999998865555678999999998

>KOG0588|consensus

Probab=99.71  E-value=1.7e-17  Score=109.78  Aligned_cols=72  Identities=21%  Similarity=0.404  Sum_probs=66.0

Q ss_pred             hcH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCccccccccccccccC
Q psy8010          11 RIP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDVDVREILGTPDYVGE   87 (87)
Q Consensus        11 ~~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~~~~~~~gt~~y~aP   87 (87)
                      +++ .++..+++|++.|+  .|||..+++|||+||+|++++.+   ..+||+|||+|-.-.++.-+.+.||+|.|.||
T Consensus       108 ~l~e~eaa~ff~QIi~gv--~yCH~~~icHRDLKpENlLLd~~---~nIKIADFGMAsLe~~gklLeTSCGSPHYA~P  180 (786)
T KOG0588|consen  108 PLPEREAAHFFRQILDGV--SYCHAFNICHRDLKPENLLLDVK---NNIKIADFGMASLEVPGKLLETSCGSPHYAAP  180 (786)
T ss_pred             CCCCHHHHHHHHHHHHHH--HHHhhhcceeccCCchhhhhhcc---cCEeeeccceeecccCCccccccCCCcccCCc
Confidence            445 68999999999999  99999999999999999999987   45999999999887888888999999999998

>KOG0986|consensus

Probab=99.71  E-value=1.9e-17  Score=106.05  Aligned_cols=72  Identities=15%  Similarity=0.311  Sum_probs=67.3

Q ss_pred             hcH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCccccccccccccccC
Q psy8010          11 RIP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDVDVREILGTPDYVGE   87 (87)
Q Consensus        11 ~~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~~~~~~~gt~~y~aP   87 (87)
                      .|+ +.+..++.+++.+|  .++|..+|+.||+||+||+++.+   ++++|+|+|+|..+..++.+...+||.+||||
T Consensus       283 gF~e~ra~FYAAEi~cGL--ehlH~~~iVYRDLKPeNILLDd~---GhvRISDLGLAvei~~g~~~~~rvGT~GYMAP  355 (591)
T KOG0986|consen  283 GFDEQRARFYAAEIICGL--EHLHRRRIVYRDLKPENILLDDH---GHVRISDLGLAVEIPEGKPIRGRVGTVGYMAP  355 (591)
T ss_pred             CCchHHHHHHHHHHHhhH--HHHHhcceeeccCChhheeeccC---CCeEeeccceEEecCCCCccccccCcccccCH
Confidence            355 47999999999999  99999999999999999999996   89999999999999999988888999999998

>KOG4236|consensus

Probab=99.71  E-value=2.3e-17  Score=107.77  Aligned_cols=82  Identities=26%  Similarity=0.508  Sum_probs=73.0

Q ss_pred             HHHHHhhhcHH-HHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCcccccccccc
Q psy8010           4 FIITLVARIPR-LVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDVDVREILGTP   82 (87)
Q Consensus         4 ~~~~~~~~~~~-~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~~~~~~~gt~   82 (87)
                      .+.+-.+++++ ..+.++.|++.|+  .|+|-++|+|.|+||+|+++....+...+|++|||+|+.+.+....+..+|||
T Consensus       653 ILSsEkgRL~er~TkFlvtQIL~AL--r~LH~knIvHCDLKPENVLLas~~~FPQvKlCDFGfARiIgEksFRrsVVGTP  730 (888)
T KOG4236|consen  653 ILSSEKGRLPERITKFLVTQILVAL--RYLHFKNIVHCDLKPENVLLASASPFPQVKLCDFGFARIIGEKSFRRSVVGTP  730 (888)
T ss_pred             HHHhhcccchHHHHHHHHHHHHHHH--HHhhhcceeeccCCchheeeccCCCCCceeeccccceeecchhhhhhhhcCCc
Confidence            45556678885 5677789999999  99999999999999999999988777889999999999998888778899999


Q ss_pred             ccccC
Q psy8010          83 DYVGE   87 (87)
Q Consensus        83 ~y~aP   87 (87)
                      .|.||
T Consensus       731 AYLaP  735 (888)
T KOG4236|consen  731 AYLAP  735 (888)
T ss_pred             cccCH
Confidence            99998

>KOG0614|consensus

Probab=99.70  E-value=1.3e-17  Score=108.19  Aligned_cols=73  Identities=21%  Similarity=0.380  Sum_probs=67.0

Q ss_pred             hhcH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCccccccccccccccC
Q psy8010          10 ARIP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDVDVREILGTPDYVGE   87 (87)
Q Consensus        10 ~~~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~~~~~~~gt~~y~aP   87 (87)
                      +.|. ..++.++..++.|+  .|+|+++++.||+||+|++++..   +.+|+.|||+|+.+..+...+++||||.|+||
T Consensus       515 g~Fdd~tarF~~acv~EAf--eYLH~k~iIYRDLKPENllLd~~---Gy~KLVDFGFAKki~~g~KTwTFcGTpEYVAP  588 (732)
T KOG0614|consen  515 GSFDDYTARFYVACVLEAF--EYLHRKGIIYRDLKPENLLLDNR---GYLKLVDFGFAKKIGSGRKTWTFCGTPEYVAP  588 (732)
T ss_pred             CCcccchhhhhHHHHHHHH--HHHHhcCceeccCChhheeeccC---CceEEeehhhHHHhccCCceeeecCCcccccc
Confidence            3455 36888889999999  99999999999999999999985   89999999999999999999999999999998

>KOG0604|consensus

Probab=99.70  E-value=3.3e-17  Score=100.77  Aligned_cols=74  Identities=22%  Similarity=0.338  Sum_probs=67.3

Q ss_pred             cH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCccccccccccccccC
Q psy8010          12 IP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDVDVREILGTPDYVGE   87 (87)
Q Consensus        12 ~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~~~~~~~gt~~y~aP   87 (87)
                      |. +++..++.|+..|+  .|||+.+|-|||+||+|++......++.+|+.|||+|+.-.......+.|.||+|.||
T Consensus       158 fTErea~eI~~qI~~Av--~~lH~~nIAHRDlKpENLLyt~t~~na~lKLtDfGFAK~t~~~~~L~TPc~TPyYvaP  232 (400)
T KOG0604|consen  158 FTEREASEIMKQIGLAV--RYLHSMNIAHRDLKPENLLYTTTSPNAPLKLTDFGFAKETQEPGDLMTPCFTPYYVAP  232 (400)
T ss_pred             chHHHHHHHHHHHHHHH--HHHHhcchhhccCChhheeeecCCCCcceEecccccccccCCCccccCCcccccccCH
Confidence            55 48999999999999  9999999999999999999998877889999999999986666677889999999998

>KOG0663|consensus

Probab=99.70  E-value=2.8e-17  Score=102.14  Aligned_cols=73  Identities=19%  Similarity=0.230  Sum_probs=64.3

Q ss_pred             hhcH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCC-ccccccccccccccC
Q psy8010          10 ARIP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRD-VDVREILGTPDYVGE   87 (87)
Q Consensus        10 ~~~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~-~~~~~~~gt~~y~aP   87 (87)
                      ++|. .++++++.|++.|+  .|+|...++|||+|++|++.+..   +.+|++|||+|+.+... ...+..+-|.||+||
T Consensus       172 q~F~~~evK~L~~QlL~gl--k~lH~~wilHRDLK~SNLLm~~~---G~lKiaDFGLAR~ygsp~k~~T~lVVTLWYRaP  246 (419)
T KOG0663|consen  172 QPFLPGEVKTLMLQLLRGL--KHLHDNWILHRDLKTSNLLLSHK---GILKIADFGLAREYGSPLKPYTPLVVTLWYRAP  246 (419)
T ss_pred             CCCchHHHHHHHHHHHHHH--HHHhhceeEecccchhheeeccC---CcEEecccchhhhhcCCcccCcceEEEeeecCH
Confidence            3555 58999999999999  99999999999999999999985   89999999999988544 345677889999997

>KOG0585|consensus

Probab=99.69  E-value=2.6e-17  Score=105.77  Aligned_cols=69  Identities=23%  Similarity=0.454  Sum_probs=59.9

Q ss_pred             HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCC------CccccccccccccccC
Q psy8010          14 RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSR------DVDVREILGTPDYVGE   87 (87)
Q Consensus        14 ~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~------~~~~~~~~gt~~y~aP   87 (87)
                      .+++.+++.++.||  +|+|.+|++|||+||.|++++..   +.+|++|||.+.....      +......+|||.||||
T Consensus       210 ~~Ar~ylrDvv~GL--EYLH~QgiiHRDIKPsNLLl~~~---g~VKIsDFGVs~~~~~~~~~~~d~~L~~tvGTPAF~AP  284 (576)
T KOG0585|consen  210 QQARKYLRDVVLGL--EYLHYQGIIHRDIKPSNLLLSSD---GTVKISDFGVSNEFPQGSDEGSDDQLSRTVGTPAFFAP  284 (576)
T ss_pred             HHHHHHHHHHHHHH--HHHHhcCeeccccchhheEEcCC---CcEEeeccceeeecccCCccccHHHHhhcCCCccccch
Confidence            58999999999999  99999999999999999999995   8999999999887622      2233446999999998

>KOG0192|consensus

Probab=99.68  E-value=7.7e-17  Score=101.97  Aligned_cols=74  Identities=14%  Similarity=0.359  Sum_probs=62.3

Q ss_pred             hhcH-HHHHHHHHHHHHHHHHHHhhhCC-ceecCCCCCceEeeeCCCCCcEEEEeeccceecCCC-cccccccccccccc
Q psy8010          10 ARIP-RLVAKVTVTLLGSLNHHFTSTHS-LYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRD-VDVREILGTPDYVG   86 (87)
Q Consensus        10 ~~~~-~~~~~~~~q~~~~l~~~~~h~~~-~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~-~~~~~~~gt~~y~a   86 (87)
                      ..++ ..+..++-+++.||  .|+|+++ ++|+|+|+.|++++.+.  ..+||+|||+++..... .......||+.|||
T Consensus       137 ~~l~~~~~l~~aldiArGm--~YLH~~~~iIHrDLK~~NiLv~~~~--~~~KI~DFGlsr~~~~~~~~~~~~~GT~~wMA  212 (362)
T KOG0192|consen  137 RKLPLKVRLRIALDIARGM--EYLHSEGPIIHRDLKSDNILVDLKG--KTLKIADFGLSREKVISKTSMTSVAGTYRWMA  212 (362)
T ss_pred             CCCCHHHHHHHHHHHHHHH--HHHhcCCCeeecccChhhEEEcCCC--CEEEECCCccceeeccccccccCCCCCccccC
Confidence            3455 57899999999999  9999999 99999999999999951  38999999999876543 33344799999999


Q ss_pred             C
Q psy8010          87 E   87 (87)
Q Consensus        87 P   87 (87)
                      |
T Consensus       213 P  213 (362)
T KOG0192|consen  213 P  213 (362)
T ss_pred             h
Confidence            8

>KOG0032|consensus

Probab=99.67  E-value=1.8e-16  Score=100.94  Aligned_cols=74  Identities=24%  Similarity=0.475  Sum_probs=66.3

Q ss_pred             cH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCC-CCcEEEEeeccceecCCCccccccccccccccC
Q psy8010          12 IP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYP-DCDVKLCDFGISRHLSRDVDVREILGTPDYVGE   87 (87)
Q Consensus        12 ~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~-~~~~kl~dfg~~~~~~~~~~~~~~~gt~~y~aP   87 (87)
                      ++ ..+..++.|++.++  .|||+.|++|+|+||+|+++....+ +..++++|||++.....+......+|||+|+||
T Consensus       132 ~sE~da~~~~~~il~av--~~lH~~gvvHrDlKpEN~L~~~~~~~~~~ik~~DFGla~~~~~~~~~~~~~Gtp~y~AP  207 (382)
T KOG0032|consen  132 YSERDAAGIIRQILEAV--KYLHSLGVVHRDLKPENLLLASKDEGSGRIKLIDFGLAKFIKPGERLHTIVGTPEYVAP  207 (382)
T ss_pred             CCHHHHHHHHHHHHHHH--HHHHhCCceeccCCHHHeeeccccCCCCcEEEeeCCCceEccCCceEeeecCCccccCc
Confidence            66 47999999999999  9999999999999999999987643 357999999999998776677889999999998

>KOG0612|consensus

Probab=99.67  E-value=7.2e-17  Score=111.32  Aligned_cols=73  Identities=26%  Similarity=0.417  Sum_probs=65.1

Q ss_pred             hhcH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCccc--ccccccccccc
Q psy8010          10 ARIP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDVDV--REILGTPDYVG   86 (87)
Q Consensus        10 ~~~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~~~--~~~~gt~~y~a   86 (87)
                      +++| +.++.|..+++.|+  .-+|+.|+||||+||.|++++..   +++|++|||.+-.+..+...  ...+|||.|+|
T Consensus       170 ~~~pE~~ArFY~aEiVlAl--dslH~mgyVHRDiKPDNvLld~~---GHikLADFGsClkm~~dG~V~s~~aVGTPDYIS  244 (1317)
T KOG0612|consen  170 DRLPEDWARFYTAEIVLAL--DSLHSMGYVHRDIKPDNVLLDKS---GHIKLADFGSCLKMDADGTVRSSVAVGTPDYIS  244 (1317)
T ss_pred             CCChHHHHHHHHHHHHHHH--HHHHhccceeccCCcceeEeccc---CcEeeccchhHHhcCCCCcEEeccccCCCCccC
Confidence            3788 48999999999999  99999999999999999999995   89999999988888655444  56899999999


Q ss_pred             C
Q psy8010          87 E   87 (87)
Q Consensus        87 P   87 (87)
                      |
T Consensus       245 P  245 (1317)
T KOG0612|consen  245 P  245 (1317)
T ss_pred             H
Confidence            8

>KOG4717|consensus

Probab=99.67  E-value=1.4e-16  Score=103.98  Aligned_cols=83  Identities=18%  Similarity=0.295  Sum_probs=76.4

Q ss_pred             ChhHHHHHhhhcH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCccccccc
Q psy8010           1 MTNFIITLVARIP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDVDVREIL   79 (87)
Q Consensus         1 ~~~~~~~~~~~~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~~~~~~~   79 (87)
                      |.+||......+. +.+++|++|++.++  .|||...++|||+||+|+++...  -+.+|+.|||++..+.+++...+.|
T Consensus       104 l~DyImKHe~Gl~E~La~kYF~QI~~AI--~YCHqLHVVHRDLKPENVVFFEK--lGlVKLTDFGFSNkf~PG~kL~TsC  179 (864)
T KOG4717|consen  104 LFDYIMKHEEGLNEDLAKKYFAQIVHAI--SYCHQLHVVHRDLKPENVVFFEK--LGLVKLTDFGFSNKFQPGKKLTTSC  179 (864)
T ss_pred             HHHHHHhhhccccHHHHHHHHHHHHHHH--HHHhhhhhhcccCCcceeEEeee--cCceEeeeccccccCCCcchhhccc
Confidence            4578888888888 58999999999999  99999999999999999998876  4789999999999999999999999


Q ss_pred             cccccccC
Q psy8010          80 GTPDYVGE   87 (87)
Q Consensus        80 gt~~y~aP   87 (87)
                      |+..|.||
T Consensus       180 GSLAYSAP  187 (864)
T KOG4717|consen  180 GSLAYSAP  187 (864)
T ss_pred             chhhccCc
Confidence            99999988

>KOG0696|consensus

Probab=99.67  E-value=1.2e-16  Score=102.17  Aligned_cols=79  Identities=22%  Similarity=0.423  Sum_probs=71.5

Q ss_pred             HHHHHhhhcHH-HHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeecccee-cCCCccccccccc
Q psy8010           4 FIITLVARIPR-LVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRH-LSRDVDVREILGT   81 (87)
Q Consensus         4 ~~~~~~~~~~~-~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~-~~~~~~~~~~~gt   81 (87)
                      |..+..++|.| .+..++.+++.+|  .++|++||+.||+|..|++++.+   +++|+.|||+++. +-++.+.+++|||
T Consensus       439 yhiQQ~GkFKEp~AvFYAaEiaigL--FFLh~kgIiYRDLKLDNvmLd~e---GHiKi~DFGmcKEni~~~~TTkTFCGT  513 (683)
T KOG0696|consen  439 YHIQQVGKFKEPVAVFYAAEIAIGL--FFLHSKGIIYRDLKLDNVMLDSE---GHIKIADFGMCKENIFDGVTTKTFCGT  513 (683)
T ss_pred             hHHHHhcccCCchhhhhhHHHHHHh--hhhhcCCeeeeeccccceEeccC---CceEeeecccccccccCCcceeeecCC
Confidence            67788888885 8999999999999  99999999999999999999995   8999999999985 3566778899999


Q ss_pred             cccccC
Q psy8010          82 PDYVGE   87 (87)
Q Consensus        82 ~~y~aP   87 (87)
                      |.|+||
T Consensus       514 PdYiAP  519 (683)
T KOG0696|consen  514 PDYIAP  519 (683)
T ss_pred             Cccccc
Confidence            999998

>KOG0589|consensus

Probab=99.64  E-value=1.2e-16  Score=102.17  Aligned_cols=73  Identities=25%  Similarity=0.383  Sum_probs=66.5

Q ss_pred             hhcH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCc-cccccccccccccC
Q psy8010          10 ARIP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDV-DVREILGTPDYVGE   87 (87)
Q Consensus        10 ~~~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~-~~~~~~gt~~y~aP   87 (87)
                      ..|+ +.+..++.|++.|+  .|||+..|+|||+|..|++++++   ..+++.|||+|+.+.... ...+.+|||+||+|
T Consensus       101 ~~f~E~~i~~~~~Q~~~av--~ylH~~~iLHRDlK~~Nifltk~---~~VkLgDfGlaK~l~~~~~~a~tvvGTp~YmcP  175 (426)
T KOG0589|consen  101 VLFPEERILKWFVQILLAV--NYLHENRVLHRDLKCANIFLTKD---KKVKLGDFGLAKILNPEDSLASTVVGTPYYMCP  175 (426)
T ss_pred             ccccHHHHHHHHHHHHHHH--HHHHhhhhhcccchhhhhhcccc---CceeecchhhhhhcCCchhhhheecCCCcccCH
Confidence            5677 58999999999999  99999999999999999999996   788999999999987665 56789999999998

>KOG0597|consensus

Probab=99.64  E-value=2.6e-16  Score=103.25  Aligned_cols=75  Identities=29%  Similarity=0.571  Sum_probs=65.9

Q ss_pred             HhhhcH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCccc-cccccccccc
Q psy8010           8 LVARIP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDVDV-REILGTPDYV   85 (87)
Q Consensus         8 ~~~~~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~~~-~~~~gt~~y~   85 (87)
                      -.+.++ +.++.++.+++.|+  .|+|+.+++|+|.||+||++...   +.+|++|||+|+-+...... +..-|||.||
T Consensus        93 ~d~~lpEe~v~~~a~~LVsaL--~yLhs~rilhrd~kPqniLl~~~---~~~KlcdFg~Ar~m~~~t~vltsikGtPlYm  167 (808)
T KOG0597|consen   93 QDGKLPEEQVRAIAYDLVSAL--YYLHSNRILHRDMKPQNILLEKG---GTLKLCDFGLARAMSTNTSVLTSIKGTPLYM  167 (808)
T ss_pred             hccCCCHHHHHHHHHHHHHHH--HHHHhcCcccccCCcceeeecCC---CceeechhhhhhhcccCceeeeeccCccccc
Confidence            345667 58999999999999  99999999999999999999996   89999999999988655444 5578999999


Q ss_pred             cC
Q psy8010          86 GE   87 (87)
Q Consensus        86 aP   87 (87)
                      ||
T Consensus       168 AP  169 (808)
T KOG0597|consen  168 AP  169 (808)
T ss_pred             CH
Confidence            98

>KOG0983|consensus

Probab=99.64  E-value=8.9e-16  Score=93.81  Aligned_cols=80  Identities=26%  Similarity=0.525  Sum_probs=68.2

Q ss_pred             hHHHHHhhhcHH-HHHHHHHHHHHHHHHHHhh-hCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCcccccccc
Q psy8010           3 NFIITLVARIPR-LVAKVTVTLLGSLNHHFTS-THSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDVDVREILG   80 (87)
Q Consensus         3 ~~~~~~~~~~~~-~~~~~~~q~~~~l~~~~~h-~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~~~~~~~g   80 (87)
                      .+++...+.+|| .+-++...++.||  .|+. .++++|||+||+||+++..   +.+|++|||++.++.+...+....|
T Consensus       179 kLlkrik~piPE~ilGk~tva~v~AL--~YLKeKH~viHRDvKPSNILlDe~---GniKlCDFGIsGrlvdSkAhtrsAG  253 (391)
T KOG0983|consen  179 KLLKRIKGPIPERILGKMTVAIVKAL--YYLKEKHGVIHRDVKPSNILLDER---GNIKLCDFGISGRLVDSKAHTRSAG  253 (391)
T ss_pred             HHHHHhcCCchHHhhhhhHHHHHHHH--HHHHHhcceeecccCccceEEccC---CCEEeecccccceeecccccccccC
Confidence            456666777886 4566777788999  9987 5899999999999999995   8899999999999888777777799


Q ss_pred             ccccccC
Q psy8010          81 TPDYVGE   87 (87)
Q Consensus        81 t~~y~aP   87 (87)
                      .+.||||
T Consensus       254 C~~YMaP  260 (391)
T KOG0983|consen  254 CAAYMAP  260 (391)
T ss_pred             CccccCc
Confidence            9999998

>KOG0667|consensus

Probab=99.63  E-value=5.4e-16  Score=101.85  Aligned_cols=71  Identities=24%  Similarity=0.319  Sum_probs=62.4

Q ss_pred             cH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCccccccccccccccC
Q psy8010          12 IP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDVDVREILGTPDYVGE   87 (87)
Q Consensus        12 ~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~~~~~~~gt~~y~aP   87 (87)
                      ++ ..++.++.|++.+|  .+||..+|||.|+||+||++...+ ...+|++|||.++...  +...+++.|.+|+||
T Consensus       286 lsl~~ir~~~~Qil~~L--~~L~~l~IIHcDLKPENILL~~~~-r~~vKVIDFGSSc~~~--q~vytYiQSRfYRAP  357 (586)
T KOG0667|consen  286 LSLPLVRKFAQQILTAL--LFLHELGIIHCDLKPENILLKDPK-RSRIKVIDFGSSCFES--QRVYTYIQSRFYRAP  357 (586)
T ss_pred             CCHHHHHHHHHHHHHHH--HHHHhCCeeeccCChhheeeccCC-cCceeEEecccccccC--Ccceeeeeccccccc
Confidence            44 67999999999999  999999999999999999998765 3689999999998754  345589999999998

>PTZ00036 glycogen synthase kinase; Provisional

Probab=99.63  E-value=5e-16  Score=100.28  Aligned_cols=72  Identities=24%  Similarity=0.377  Sum_probs=61.5

Q ss_pred             cH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCccccccccccccccC
Q psy8010          12 IP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDVDVREILGTPDYVGE   87 (87)
Q Consensus        12 ~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~~~~~~~gt~~y~aP   87 (87)
                      ++ ..+..++.|++.|+  .|+|+++++|||+||+|++++..  ...+|++|||+++.+..........||+.|+||
T Consensus       167 l~~~~~~~~~~qi~~gL--~yLH~~~IiHrDLKp~NILl~~~--~~~vkL~DFGla~~~~~~~~~~~~~~t~~y~aP  239 (440)
T PTZ00036        167 LPLFLVKLYSYQLCRAL--AYIHSKFICHRDLKPQNLLIDPN--THTLKLCDFGSAKNLLAGQRSVSYICSRFYRAP  239 (440)
T ss_pred             CCHHHHHHHHHHHHHHH--HHHHHCCEecCCcCHHHEEEcCC--CCceeeeccccchhccCCCCcccCCCCcCccCH
Confidence            44 47888999999999  99999999999999999999864  246999999999877655555567889999998

>KOG0579|consensus

Probab=99.63  E-value=4.9e-16  Score=103.50  Aligned_cols=77  Identities=21%  Similarity=0.380  Sum_probs=63.6

Q ss_pred             HHHhhhcH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCC-Cccccccccccc
Q psy8010           6 ITLVARIP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSR-DVDVREILGTPD   83 (87)
Q Consensus         6 ~~~~~~~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~-~~~~~~~~gt~~   83 (87)
                      -.+...+. .++..+++|++.+|  .|+|+++|+|||+|..||+++.+   +.++++|||.+-.... ......+.||||
T Consensus       121 lEL~r~LtE~QIqvvc~q~ldAL--n~LHs~~iIHRDLKAGNiL~Tld---GdirLADFGVSAKn~~t~qkRDsFIGTPY  195 (1187)
T KOG0579|consen  121 LELGRVLTEDQIQVVCYQVLDAL--NWLHSQNIIHRDLKAGNILLTLD---GDIRLADFGVSAKNKSTRQKRDSFIGTPY  195 (1187)
T ss_pred             HHhccccchHHHHHHHHHHHHHH--HHHhhcchhhhhccccceEEEec---CcEeeecccccccchhHHhhhccccCCcc
Confidence            34444555 48999999999999  99999999999999999999996   8899999998765422 223357899999


Q ss_pred             cccC
Q psy8010          84 YVGE   87 (87)
Q Consensus        84 y~aP   87 (87)
                      ||||
T Consensus       196 WMAP  199 (1187)
T KOG0579|consen  196 WMAP  199 (1187)
T ss_pred             cccc
Confidence            9998

>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases

Probab=99.61  E-value=1.8e-15  Score=94.33  Aligned_cols=79  Identities=22%  Similarity=0.386  Sum_probs=63.3

Q ss_pred             HHHHHhhhcH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCccc--ccccc
Q psy8010           4 FIITLVARIP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDVDV--REILG   80 (87)
Q Consensus         4 ~~~~~~~~~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~~~--~~~~g   80 (87)
                      ++......++ +.+..++.|++.++  .|+|+++++|+|++|.|++++.+   ..++++|||++..+......  ...+|
T Consensus        91 ~l~~~~~~~~~~~~~~~~~qi~~~l--~~lH~~~ivH~dlkp~Nill~~~---~~~kl~Dfg~~~~~~~~~~~~~~~~~g  165 (331)
T cd05597          91 LLSKFEDRLPEDMARFYLAEMVLAI--DSVHQLGYVHRDIKPDNVLLDKN---GHIRLADFGSCLRLLADGTVQSNVAVG  165 (331)
T ss_pred             HHHHhcCCCCHHHHHHHHHHHHHHH--HHHHhCCeEECCCCHHHEEECCC---CCEEEEECCceeecCCCCCccccceec
Confidence            4444344566 57888999999999  99999999999999999999874   78999999998876443322  23579


Q ss_pred             ccccccC
Q psy8010          81 TPDYVGE   87 (87)
Q Consensus        81 t~~y~aP   87 (87)
                      |+.||||
T Consensus       166 t~~y~aP  172 (331)
T cd05597         166 TPDYISP  172 (331)
T ss_pred             cccccCH
Confidence            9999998

Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,

>KOG0662|consensus

Probab=99.61  E-value=6.5e-16  Score=89.96  Aligned_cols=78  Identities=26%  Similarity=0.379  Sum_probs=63.5

Q ss_pred             HHHHhhhcH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCcc-cccccccc
Q psy8010           5 IITLVARIP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDVD-VREILGTP   82 (87)
Q Consensus         5 ~~~~~~~~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~~-~~~~~gt~   82 (87)
                      +..+.+.+. +.++.++.|++.++  .|||+++++|||+||+|++++.+   +++|++|||+++-+.-... ....+-|.
T Consensus        91 fdslng~~d~~~~rsfmlqllrgl--~fchshnvlhrdlkpqnllin~n---gelkladfglarafgipvrcysaevvtl  165 (292)
T KOG0662|consen   91 FDSLNGDLDPEIVRSFMLQLLRGL--GFCHSHNVLHRDLKPQNLLINRN---GELKLADFGLARAFGIPVRCYSAEVVTL  165 (292)
T ss_pred             HHhcCCcCCHHHHHHHHHHHHhhh--hhhhhhhhhhccCCcceEEeccC---CcEEecccchhhhcCCceEeeeceeeee
Confidence            333444444 67999999999999  99999999999999999999995   8999999999997754442 34457788


Q ss_pred             ccccC
Q psy8010          83 DYVGE   87 (87)
Q Consensus        83 ~y~aP   87 (87)
                      +|++|
T Consensus       166 wyrpp  170 (292)
T KOG0662|consen  166 WYRPP  170 (292)
T ss_pred             eccCc
Confidence            88876

>PHA03209 serine/threonine kinase US3; Provisional

Probab=99.61  E-value=1.4e-15  Score=95.69  Aligned_cols=78  Identities=12%  Similarity=0.178  Sum_probs=63.0

Q ss_pred             HHHHhhhcH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCccccccccccc
Q psy8010           5 IITLVARIP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDVDVREILGTPD   83 (87)
Q Consensus         5 ~~~~~~~~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~~~~~~~gt~~   83 (87)
                      +......++ +.+..++.|++.++  .|+|.++++|+|+||.|+++...   ..++++|||++.............||+.
T Consensus       147 l~~~~~~~~~~~~~~i~~qi~~aL--~~LH~~~ivHrDlkp~Nill~~~---~~~kl~DfG~a~~~~~~~~~~~~~gt~~  221 (357)
T PHA03209        147 LTKRSRPLPIDQALIIEKQILEGL--RYLHAQRIIHRDVKTENIFINDV---DQVCIGDLGAAQFPVVAPAFLGLAGTVE  221 (357)
T ss_pred             HHhccCCCCHHHHHHHHHHHHHHH--HHHHHCCeecCCCCHHHEEECCC---CCEEEecCccccccccCccccccccccc
Confidence            333334455 57889999999999  99999999999999999999875   7899999999875433333445689999


Q ss_pred             cccC
Q psy8010          84 YVGE   87 (87)
Q Consensus        84 y~aP   87 (87)
                      |+||
T Consensus       222 y~aP  225 (357)
T PHA03209        222 TNAP  225 (357)
T ss_pred             ccCC
Confidence            9998

>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B

Probab=99.61  E-value=1.8e-15  Score=93.97  Aligned_cols=71  Identities=17%  Similarity=0.344  Sum_probs=59.7

Q ss_pred             cH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecC-CCccccccccccccccC
Q psy8010          12 IP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLS-RDVDVREILGTPDYVGE   87 (87)
Q Consensus        12 ~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~-~~~~~~~~~gt~~y~aP   87 (87)
                      ++ +.+..++.|++.++  .|+|+.+++|+|++|+|++++.+   ..++++|||+++... ........+||+.|+||
T Consensus        92 ~~~~~~~~~~~qi~~~L--~~lH~~~ivHrDlkp~NIll~~~---~~~kl~DfG~a~~~~~~~~~~~~~~gt~~y~aP  164 (323)
T cd05571          92 FSEDRARFYGAEIVSAL--GYLHSCDVVYRDLKLENLMLDKD---GHIKITDFGLCKEGISDGATMKTFCGTPEYLAP  164 (323)
T ss_pred             CCHHHHHHHHHHHHHHH--HHHHhCCeEeCCCCHHHEEECCC---CCEEEeeCCCCcccccCCCcccceecCccccCh
Confidence            44 47888999999999  99999999999999999999875   789999999987542 23334557899999998

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be

>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha

Probab=99.61  E-value=1.8e-15  Score=94.35  Aligned_cols=79  Identities=20%  Similarity=0.377  Sum_probs=63.2

Q ss_pred             HHHHHhhhcH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCccc--ccccc
Q psy8010           4 FIITLVARIP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDVDV--REILG   80 (87)
Q Consensus         4 ~~~~~~~~~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~~~--~~~~g   80 (87)
                      +++.....++ +.+..++.|++.++  .++|+.+++|+|+||+|++++.+   ..++++|||++..+......  ...+|
T Consensus        91 ~l~~~~~~l~~~~~~~~~~qi~~al--~~lH~~~iiHrDlkp~Nili~~~---~~~kL~DfG~a~~~~~~~~~~~~~~~g  165 (332)
T cd05623          91 LLSKFEDRLPEDMARFYLAEMVIAI--DSVHQLHYVHRDIKPDNILMDMN---GHIRLADFGSCLKLMEDGTVQSSVAVG  165 (332)
T ss_pred             HHHHhcCCCCHHHHHHHHHHHHHHH--HHHHHCCeEecCCCHHHEEECCC---CCEEEeecchheecccCCcceeccccc
Confidence            4444445566 47888999999999  99999999999999999999874   78999999998765433222  34589


Q ss_pred             ccccccC
Q psy8010          81 TPDYVGE   87 (87)
Q Consensus        81 t~~y~aP   87 (87)
                      |+.|+||
T Consensus       166 t~~y~aP  172 (332)
T cd05623         166 TPDYISP  172 (332)
T ss_pred             CccccCH
Confidence            9999998

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw

>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta

Probab=99.61  E-value=1.8e-15  Score=94.34  Aligned_cols=79  Identities=22%  Similarity=0.412  Sum_probs=63.4

Q ss_pred             HHHHHhhhcH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCccc--ccccc
Q psy8010           4 FIITLVARIP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDVDV--REILG   80 (87)
Q Consensus         4 ~~~~~~~~~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~~~--~~~~g   80 (87)
                      ++......++ +.+..++.|++.++  .++|+++++|+|+||+|++++.+   ..++++|||++..+......  ...+|
T Consensus        91 ~l~~~~~~l~~~~~~~~~~qi~~~L--~~lH~~~iiHrDlkp~Nill~~~---~~~kl~DfG~a~~~~~~~~~~~~~~~g  165 (331)
T cd05624          91 LLSKFEDRLPEDMARFYIAEMVLAI--HSIHQLHYVHRDIKPDNVLLDMN---GHIRLADFGSCLKMNQDGTVQSSVAVG  165 (331)
T ss_pred             HHHHhcCCCCHHHHHHHHHHHHHHH--HHHHHCCeeeccCchHHEEEcCC---CCEEEEeccceeeccCCCceeeccccC
Confidence            4444444566 57888999999999  99999999999999999999874   78999999999876443322  33579


Q ss_pred             ccccccC
Q psy8010          81 TPDYVGE   87 (87)
Q Consensus        81 t~~y~aP   87 (87)
                      |+.|+||
T Consensus       166 t~~y~aP  172 (331)
T cd05624         166 TPDYISP  172 (331)
T ss_pred             CcccCCH
Confidence            9999997

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.

>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1

Probab=99.60  E-value=1.4e-15  Score=95.83  Aligned_cols=54  Identities=20%  Similarity=0.279  Sum_probs=48.2

Q ss_pred             hcH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceec
Q psy8010          11 RIP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHL   69 (87)
Q Consensus        11 ~~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~   69 (87)
                      .++ +.+..++.|++.|+  .|+|+++++|+|+||+|++++.+   ..++++|||++..+
T Consensus        97 ~l~~~~~~~~~~qi~~aL--~~lH~~givHrDlKp~NILi~~~---~~vkL~DFGla~~~  151 (363)
T cd05628          97 TLTEEETQFYIAETVLAI--DSIHQLGFIHRDIKPDNLLLDSK---GHVKLSDFGLCTGL  151 (363)
T ss_pred             CCCHHHHHHHHHHHHHHH--HHHHhCCeEecCCCHHHeEECCC---CCEEEeeccCcccc
Confidence            455 57899999999999  99999999999999999999875   78999999998754

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus

>KOG0664|consensus

Probab=99.60  E-value=3.4e-16  Score=95.88  Aligned_cols=69  Identities=23%  Similarity=0.443  Sum_probs=59.8

Q ss_pred             HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCc--cccccccccccccC
Q psy8010          14 RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDV--DVREILGTPDYVGE   87 (87)
Q Consensus        14 ~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~--~~~~~~gt~~y~aP   87 (87)
                      +.++-+.+|++.++  .|+|+.+|+|||+||.|++++.+   +-+|++|||+++.+..++  ..+..+-|-+|+||
T Consensus       156 DHvKVFlYQILRGL--KYLHsA~ILHRDIKPGNLLVNSN---CvLKICDFGLARvee~d~~~hMTqEVVTQYYRAP  226 (449)
T KOG0664|consen  156 DHVKVFVYQILRGL--KYLHTANILHRDIKPGNLLVNSN---CILKICDFGLARTWDQRDRLNMTHEVVTQYYRAP  226 (449)
T ss_pred             chhhhhHHHHHhhh--HHHhhcchhhccCCCccEEeccC---ceEEecccccccccchhhhhhhHHHHHHHHhccH
Confidence            56889999999999  99999999999999999999995   899999999999875443  23566778888887

>KOG0596|consensus

Probab=99.60  E-value=2.1e-15  Score=98.49  Aligned_cols=67  Identities=24%  Similarity=0.372  Sum_probs=60.6

Q ss_pred             HHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCccc---cccccccccccC
Q psy8010          15 LVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDVDV---REILGTPDYVGE   87 (87)
Q Consensus        15 ~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~~~---~~~~gt~~y~aP   87 (87)
                      .++.++.|++.++  ..+|.+||+|.|+||.|+++-+    +.+|++|||+|.-+..+.+.   ...+||+.||||
T Consensus       461 ~lk~ywkqML~aV--~~IH~~gIVHSDLKPANFLlVk----G~LKLIDFGIA~aI~~DTTsI~kdsQvGT~NYMsP  530 (677)
T KOG0596|consen  461 FLKFYWKQMLLAV--KTIHQHGIVHSDLKPANFLLVK----GRLKLIDFGIANAIQPDTTSIVKDSQVGTVNYMSP  530 (677)
T ss_pred             HHHHHHHHHHHHH--HHHHHhceeecCCCcccEEEEe----eeEEeeeechhcccCccccceeeccccCcccccCH
Confidence            7899999999999  9999999999999999999998    78999999999988766543   356999999998

>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase

Probab=99.60  E-value=1.8e-15  Score=93.10  Aligned_cols=72  Identities=24%  Similarity=0.292  Sum_probs=59.7

Q ss_pred             hcH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCC-CccccccccccccccC
Q psy8010          11 RIP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSR-DVDVREILGTPDYVGE   87 (87)
Q Consensus        11 ~~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~-~~~~~~~~gt~~y~aP   87 (87)
                      .++ +.+..++.|++.|+  .|+|+++++|+|+||+|++++.+   ..+|++|||++..... ........|++.|+||
T Consensus        99 ~~~~~~~~~~~~qi~~al--~~lH~~~ivH~dlkp~Nill~~~---~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aP  172 (303)
T cd07869          99 GLHPENVKLFLFQLLRGL--SYIHQRYILHRDLKPQNLLISDT---GELKLADFGLARAKSVPSHTYSNEVVTLWYRPP  172 (303)
T ss_pred             CCCHHHHHHHHHHHHHHH--HHHHHCCeecCCCCHHHEEECCC---CCEEECCCCcceeccCCCccCCCCcccCCCCCh
Confidence            344 57899999999999  99999999999999999999874   7899999999876432 2223456789999998

Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an

>KOG0577|consensus

Probab=99.60  E-value=1.4e-15  Score=100.54  Aligned_cols=72  Identities=22%  Similarity=0.337  Sum_probs=61.7

Q ss_pred             HhhhcHH-HHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCcccccccccccccc
Q psy8010           8 LVARIPR-LVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDVDVREILGTPDYVG   86 (87)
Q Consensus         8 ~~~~~~~-~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~~~~~~~gt~~y~a   86 (87)
                      ..+++.+ ++..++.+.+.|+  .|+|+++.+|||+|..||+++.+   +.||++|||.+....+   -..++|||+|||
T Consensus       119 hkKplqEvEIAAi~~gaL~gL--aYLHS~~~IHRDiKAGNILLse~---g~VKLaDFGSAsi~~P---AnsFvGTPywMA  190 (948)
T KOG0577|consen  119 HKKPLQEVEIAAITHGALQGL--AYLHSHNRIHRDIKAGNILLSEP---GLVKLADFGSASIMAP---ANSFVGTPYWMA  190 (948)
T ss_pred             HhccchHHHHHHHHHHHHHHH--HHHHHhhHHhhhccccceEecCC---CeeeeccccchhhcCc---hhcccCCccccc
Confidence            3444554 6788889999999  99999999999999999999996   8999999998876543   457899999999


Q ss_pred             C
Q psy8010          87 E   87 (87)
Q Consensus        87 P   87 (87)
                      |
T Consensus       191 P  191 (948)
T KOG0577|consen  191 P  191 (948)
T ss_pred             h
Confidence            8

>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1

Probab=99.60  E-value=2e-15  Score=93.81  Aligned_cols=69  Identities=17%  Similarity=0.351  Sum_probs=58.5

Q ss_pred             HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCC-CccccccccccccccC
Q psy8010          14 RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSR-DVDVREILGTPDYVGE   87 (87)
Q Consensus        14 ~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~-~~~~~~~~gt~~y~aP   87 (87)
                      +.+..++.|++.++  .|+|+.|++|+|++|+|++++.+   ..++++|||+++.... .......+||+.|+||
T Consensus        96 ~~~~~~~~qi~~~L--~~lH~~giiHrDlkp~Nili~~~---~~~kl~DfG~a~~~~~~~~~~~~~~gt~~y~aP  165 (325)
T cd05602          96 PRARFYAAEIASAL--GYLHSLNIVYRDLKPENILLDSQ---GHIVLTDFGLCKENIEHNGTTSTFCGTPEYLAP  165 (325)
T ss_pred             HHHHHHHHHHHHHH--HHHHHCCeEecCCCHHHeEECCC---CCEEEccCCCCcccccCCCCcccccCCccccCH
Confidence            57788999999999  99999999999999999999875   7899999999875432 2233556899999998

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt

>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3

Probab=99.60  E-value=2.6e-15  Score=94.19  Aligned_cols=69  Identities=17%  Similarity=0.350  Sum_probs=59.7

Q ss_pred             HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCccccccccccccccC
Q psy8010          14 RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDVDVREILGTPDYVGE   87 (87)
Q Consensus        14 ~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~~~~~~~gt~~y~aP   87 (87)
                      +.+..++.|++.|+  .|+|++|++|+|++|+|++++.+   ..++++|||+++............||+.|+||
T Consensus       119 ~~~~~~~~qi~~aL--~~LH~~givHrDikp~Nill~~~---~~~kl~Dfg~~~~~~~~~~~~~~~~t~~y~aP  187 (355)
T cd07874         119 ERMSYLLYQMLCGI--KHLHSAGIIHRDLKPSNIVVKSD---CTLKILDFGLARTAGTSFMMTPYVVTRYYRAP  187 (355)
T ss_pred             HHHHHHHHHHHHHH--HHHHhCCcccCCCChHHEEECCC---CCEEEeeCcccccCCCccccCCccccCCccCH
Confidence            46788999999999  99999999999999999999875   78999999999875544444567899999998

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok

>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase

Probab=99.60  E-value=2.3e-15  Score=93.55  Aligned_cols=79  Identities=20%  Similarity=0.354  Sum_probs=63.5

Q ss_pred             HHHHHhhhcH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCccc--ccccc
Q psy8010           4 FIITLVARIP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDVDV--REILG   80 (87)
Q Consensus         4 ~~~~~~~~~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~~~--~~~~g   80 (87)
                      +++.....++ +.+..++.|++.++  .++|+.+++|+|++|+|++++..   ..++++|||++..+......  ....|
T Consensus        91 ~l~~~~~~l~~~~~~~~~~qi~~aL--~~lH~~~i~H~Dlkp~NIll~~~---~~~kL~Dfg~a~~~~~~~~~~~~~~~g  165 (330)
T cd05601          91 LLNRYEDQFDEDMAQFYLAELVLAI--HSVHQMGYVHRDIKPENVLIDRT---GHIKLADFGSAARLTANKMVNSKLPVG  165 (330)
T ss_pred             HHHHhcCCCCHHHHHHHHHHHHHHH--HHHHHCCeEcccCchHheEECCC---CCEEeccCCCCeECCCCCceeeecccC
Confidence            4444434566 47888999999999  99999999999999999999875   78999999999876443322  34578


Q ss_pred             ccccccC
Q psy8010          81 TPDYVGE   87 (87)
Q Consensus        81 t~~y~aP   87 (87)
                      |+.|+||
T Consensus       166 t~~y~aP  172 (330)
T cd05601         166 TPDYIAP  172 (330)
T ss_pred             CccccCH
Confidence            9999997

Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor

>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4

Probab=99.60  E-value=2.8e-15  Score=91.59  Aligned_cols=71  Identities=17%  Similarity=0.291  Sum_probs=61.4

Q ss_pred             cH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCccccccccccccccC
Q psy8010          12 IP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDVDVREILGTPDYVGE   87 (87)
Q Consensus        12 ~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~~~~~~~gt~~y~aP   87 (87)
                      ++ +.+..++.|++.++  .|+|+.+++|+|++|+|++++.+   ..++++|||++.............|++.|+||
T Consensus        99 ~~~~~~~~~~~qi~~~l--~~lH~~~iiH~dikp~Nill~~~---~~~kl~Dfg~~~~~~~~~~~~~~~g~~~y~aP  170 (285)
T cd05631          99 FDEQRAIFYAAELCCGL--EDLQRERIVYRDLKPENILLDDR---GHIRISDLGLAVQIPEGETVRGRVGTVGYMAP  170 (285)
T ss_pred             CCHHHHHHHHHHHHHHH--HHHHhCCEEeCCCCHHHEEECCC---CCEEEeeCCCcEEcCCCCeecCCCCCCCccCH
Confidence            45 47888999999999  99999999999999999999874   78999999999876555455566899999998

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i

>KOG0193|consensus

Probab=99.59  E-value=1.5e-15  Score=99.70  Aligned_cols=80  Identities=11%  Similarity=0.251  Sum_probs=67.1

Q ss_pred             hHHHHHhhhcH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeecccee---cCCCcccccc
Q psy8010           3 NFIITLVARIP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRH---LSRDVDVREI   78 (87)
Q Consensus         3 ~~~~~~~~~~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~---~~~~~~~~~~   78 (87)
                      .+++....+|. ....++++|++.|+  .|+|.++|+|||+|..||++..+   ..|||.|||++-.   +.......+.
T Consensus       476 ~hlHv~etkfdm~~~idIAqQiaqGM--~YLHAK~IIHrDLKSnNIFl~~~---~kVkIgDFGLatvk~~w~g~~q~~qp  550 (678)
T KOG0193|consen  476 THLHVQETKFDMNTTIDIAQQIAQGM--DYLHAKNIIHRDLKSNNIFLHED---LKVKIGDFGLATVKTRWSGEQQLEQP  550 (678)
T ss_pred             hhccchhhhhhHHHHHHHHHHHHHhh--hhhhhhhhhhhhccccceEEccC---CcEEEecccceeeeeeeccccccCCC
Confidence            34555666666 57899999999999  99999999999999999999985   8999999998753   4445556778


Q ss_pred             ccccccccC
Q psy8010          79 LGTPDYVGE   87 (87)
Q Consensus        79 ~gt~~y~aP   87 (87)
                      .|..-||||
T Consensus       551 ~gsilwmAP  559 (678)
T KOG0193|consen  551 HGSLLWMAP  559 (678)
T ss_pred             ccchhhhcH
Confidence            999999998

>KOG0690|consensus

Probab=99.59  E-value=8.3e-16  Score=95.94  Aligned_cols=71  Identities=17%  Similarity=0.374  Sum_probs=63.8

Q ss_pred             cH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeecccee-cCCCccccccccccccccC
Q psy8010          12 IP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRH-LSRDVDVREILGTPDYVGE   87 (87)
Q Consensus        12 ~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~-~~~~~~~~~~~gt~~y~aP   87 (87)
                      |+ +.++.+-.++++|+  .|+|+.+++.||+|.+|++++++   +++|+.|||+++. +..+....++||||.|.||
T Consensus       265 FsE~RtRFYGaEIvsAL--~YLHs~~ivYRDlKLENLlLDkD---GHIKitDFGLCKE~I~~g~t~kTFCGTPEYLAP  337 (516)
T KOG0690|consen  265 FSEDRTRFYGAEIVSAL--GYLHSRNIVYRDLKLENLLLDKD---GHIKITDFGLCKEEIKYGDTTKTFCGTPEYLAP  337 (516)
T ss_pred             ccchhhhhhhHHHHHHh--hhhhhCCeeeeechhhhheeccC---CceEeeecccchhcccccceeccccCChhhcCc
Confidence            44 46889999999999  99999999999999999999996   8999999999985 4566677899999999998

>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases

Probab=99.59  E-value=2.5e-15  Score=93.47  Aligned_cols=72  Identities=21%  Similarity=0.363  Sum_probs=60.4

Q ss_pred             hcH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCC-CccccccccccccccC
Q psy8010          11 RIP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSR-DVDVREILGTPDYVGE   87 (87)
Q Consensus        11 ~~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~-~~~~~~~~gt~~y~aP   87 (87)
                      .++ +.+..++.|++.++  .|+|+++++|+|++|+|++++.+   ..++++|||++..... .......+||+.|+||
T Consensus        92 ~~~~~~~~~~~~qil~al--~~LH~~~ivHrDlkp~Nili~~~---~~~kl~Dfg~a~~~~~~~~~~~~~~gt~~y~aP  165 (330)
T cd05586          92 RFSEDRAKFYIAELVLAL--EHLHKYDIVYRDLKPENILLDAT---GHIALCDFGLSKANLTDNKTTNTFCGTTEYLAP  165 (330)
T ss_pred             CCCHHHHHHHHHHHHHHH--HHHHHCCeEeccCCHHHeEECCC---CCEEEecCCcCcCCCCCCCCccCccCCccccCH
Confidence            455 57888999999999  99999999999999999999885   7899999999876432 2334566899999998

Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of

>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2

Probab=99.59  E-value=2.5e-15  Score=93.48  Aligned_cols=72  Identities=19%  Similarity=0.268  Sum_probs=60.1

Q ss_pred             hcH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCc--cccccccccccccC
Q psy8010          11 RIP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDV--DVREILGTPDYVGE   87 (87)
Q Consensus        11 ~~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~--~~~~~~gt~~y~aP   87 (87)
                      .++ +.+..++.|++.++  .|+|+++++|+|++|+|++++.+   ..++++|||++..+....  .....+||+.|+||
T Consensus       101 ~~~~~~~~~~~~qi~~~l--~~lH~~~ivHrDlkp~Nili~~~---~~~kl~DfG~~~~~~~~~~~~~~~~~gt~~y~aP  175 (332)
T cd05614         101 NFSEDEVRFYSGEIILAL--EHLHKLGIVYRDIKLENILLDSE---GHVVLTDFGLSKEFLSEEKERTYSFCGTIEYMAP  175 (332)
T ss_pred             CCCHHHHHHHHHHHHHHH--HHHHHCCcEecCCCHHHeEECCC---CCEEEeeCcCCccccccCCCccccccCCccccCH
Confidence            345 57888999999999  99999999999999999999885   789999999988653322  23456899999998

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph

>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6

Probab=99.59  E-value=2.6e-15  Score=91.57  Aligned_cols=71  Identities=27%  Similarity=0.468  Sum_probs=61.0

Q ss_pred             cH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCccccccccccccccC
Q psy8010          12 IP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDVDVREILGTPDYVGE   87 (87)
Q Consensus        12 ~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~~~~~~~gt~~y~aP   87 (87)
                      ++ +.+..++.|++.|+  .|+|+.+++|+|++|+|++++.+   ..++++|||++.............|++.|+||
T Consensus       107 ~~~~~~~~i~~qi~~aL--~~lH~~~iiH~dlkp~Nil~~~~---~~~kl~Dfg~~~~~~~~~~~~~~~~~~~y~aP  178 (290)
T cd07862         107 VPTETIKDMMFQLLRGL--DFLHSHRVVHRDLKPQNILVTSS---GQIKLADFGLARIYSFQMALTSVVVTLWYRAP  178 (290)
T ss_pred             CCHHHHHHHHHHHHHHH--HHHHHCCeeeCCCCHHHEEEcCC---CCEEEccccceEeccCCcccccccccccccCh
Confidence            44 57889999999999  99999999999999999999885   78999999999876544444556889999998

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla

>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2

Probab=99.59  E-value=3.4e-15  Score=93.82  Aligned_cols=72  Identities=17%  Similarity=0.353  Sum_probs=60.8

Q ss_pred             hcH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCccccccccccccccC
Q psy8010          11 RIP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDVDVREILGTPDYVGE   87 (87)
Q Consensus        11 ~~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~~~~~~~gt~~y~aP   87 (87)
                      .++ +.+..++.|++.++  .|+|+++++|+|++|+|++++.+   ..++++|||+++............||+.|+||
T Consensus       119 ~~~~~~~~~~~~qi~~~L--~~LH~~~ivHrDlkp~NIl~~~~---~~~kl~Dfg~a~~~~~~~~~~~~~~t~~y~aP  191 (359)
T cd07876         119 ELDHERMSYLLYQMLCGI--KHLHSAGIIHRDLKPSNIVVKSD---CTLKILDFGLARTACTNFMMTPYVVTRYYRAP  191 (359)
T ss_pred             cCCHHHHHHHHHHHHHHH--HHHHhCCcccCCCCHHHEEECCC---CCEEEecCCCccccccCccCCCCcccCCCCCc
Confidence            344 56788999999999  99999999999999999999885   78999999998765444444556889999998

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2

Probab=99.59  E-value=2.8e-15  Score=94.94  Aligned_cols=71  Identities=24%  Similarity=0.418  Sum_probs=60.1

Q ss_pred             cH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCcc--ccccccccccccC
Q psy8010          12 IP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDVD--VREILGTPDYVGE   87 (87)
Q Consensus        12 ~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~~--~~~~~gt~~y~aP   87 (87)
                      ++ +.+..++.|++.++  .++|+++++|+|+||+|++++..   ..+|++|||++..+.....  ....+||+.||||
T Consensus       139 ~~~~~~~~~~~qil~aL--~~LH~~~IvHrDLKp~NILl~~~---~~~kL~DFG~a~~~~~~~~~~~~~~~gt~~Y~aP  212 (370)
T cd05621         139 VPEKWAKFYTAEVVLAL--DAIHSMGLIHRDVKPDNMLLDKH---GHLKLADFGTCMKMDETGMVRCDTAVGTPDYISP  212 (370)
T ss_pred             CCHHHHHHHHHHHHHHH--HHHHHCCeEecCCCHHHEEECCC---CCEEEEecccceecccCCceecccCCCCcccCCH
Confidence            44 47888999999999  99999999999999999999875   7899999999987643322  2456899999998

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found

>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase

Probab=99.59  E-value=2.6e-15  Score=91.89  Aligned_cols=71  Identities=24%  Similarity=0.317  Sum_probs=59.2

Q ss_pred             cH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCC-CccccccccccccccC
Q psy8010          12 IP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSR-DVDVREILGTPDYVGE   87 (87)
Q Consensus        12 ~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~-~~~~~~~~gt~~y~aP   87 (87)
                      ++ +.+..++.|++.|+  .|+|+++++|+|++|+|++++.+   ..+|++|||+++.... ........|++.|+||
T Consensus       100 ~~~~~~~~~~~qi~~aL--~~LH~~~ivH~dlkp~Nil~~~~---~~~kl~DfG~~~~~~~~~~~~~~~~~~~~y~aP  172 (288)
T cd07871         100 MSMHNVKIFMFQLLRGL--SYCHKRKILHRDLKPQNLLINEK---GELKLADFGLARAKSVPTKTYSNEVVTLWYRPP  172 (288)
T ss_pred             CCHHHHHHHHHHHHHHH--HHHHhCCcccCCCCHHHEEECCC---CCEEECcCcceeeccCCCccccCceecccccCh
Confidence            44 57888999999999  99999999999999999999875   7899999999876532 2233456789999998

Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament

>PHA03212 serine/threonine kinase US3; Provisional

Probab=99.58  E-value=5.1e-15  Score=94.44  Aligned_cols=71  Identities=15%  Similarity=0.159  Sum_probs=58.9

Q ss_pred             cH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCC--ccccccccccccccC
Q psy8010          12 IP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRD--VDVREILGTPDYVGE   87 (87)
Q Consensus        12 ~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~--~~~~~~~gt~~y~aP   87 (87)
                      ++ ..+..++.|++.|+  .|+|+++++|+|+||+|++++..   ..++++|||+++.....  ......+||+.|+||
T Consensus       179 l~~~~~~~i~~qi~~aL--~ylH~~~IvHrDiKP~NIll~~~---~~vkL~DFG~a~~~~~~~~~~~~~~~gt~~y~aP  252 (391)
T PHA03212        179 IAICDILAIERSVLRAI--QYLHENRIIHRDIKAENIFINHP---GDVCLGDFGAACFPVDINANKYYGWAGTIATNAP  252 (391)
T ss_pred             CCHHHHHHHHHHHHHHH--HHHHhCCcccCCCChHhEEEcCC---CCEEEEeCCcccccccccccccccccCccCCCCh
Confidence            44 47889999999999  99999999999999999999875   78999999998754221  223456899999998

>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta

Probab=99.58  E-value=5.1e-15  Score=91.80  Aligned_cols=72  Identities=19%  Similarity=0.376  Sum_probs=60.3

Q ss_pred             hcH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCC-CccccccccccccccC
Q psy8010          11 RIP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSR-DVDVREILGTPDYVGE   87 (87)
Q Consensus        11 ~~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~-~~~~~~~~gt~~y~aP   87 (87)
                      +++ +.+..++.|++.++  .|+|+.+++|+|++|+|++++.+   ..++++|||++..... .......+||+.|+||
T Consensus        92 ~~~~~~~~~~~~qi~~al--~~LH~~~ivH~dlkp~Nill~~~---~~~kL~Dfg~a~~~~~~~~~~~~~~gt~~y~aP  165 (316)
T cd05592          92 RFDEARARFYAAEIICGL--QFLHKKGIIYRDLKLDNVLLDKD---GHIKIADFGMCKENMNGEGKASTFCGTPDYIAP  165 (316)
T ss_pred             CCCHHHHHHHHHHHHHHH--HHHHHCCEEeCCCCHHHeEECCC---CCEEEccCcCCeECCCCCCccccccCCccccCH
Confidence            455 57888999999999  99999999999999999999875   7899999999886532 2233456899999998

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp

>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8

Probab=99.58  E-value=5.6e-15  Score=91.23  Aligned_cols=74  Identities=22%  Similarity=0.408  Sum_probs=59.6

Q ss_pred             cH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeC-CCCCcEEEEeeccceecCCCc----cccccccccccc
Q psy8010          12 IP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGE-YPDCDVKLCDFGISRHLSRDV----DVREILGTPDYV   85 (87)
Q Consensus        12 ~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~-~~~~~~kl~dfg~~~~~~~~~----~~~~~~gt~~y~   85 (87)
                      ++ +.+..++.|++.|+  .|+|+++++|+|+||+|+++... .....+|++|||+++.+....    ......||+.|+
T Consensus       105 l~~~~~~~i~~qi~~al--~~LH~~~ivHrDlkp~Nil~~~~~~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~t~~y~  182 (317)
T cd07868         105 LPRGMVKSLLYQILDGI--HYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPLADLDPVVVTFWYR  182 (317)
T ss_pred             CCHHHHHHHHHHHHHHH--HHHHhCCEEcCCCCHHHEEEecCCCCcCcEEEeecCceeccCCCCccccccCCcccccccc
Confidence            44 47889999999999  99999999999999999999543 124679999999998764321    224568899999


Q ss_pred             cC
Q psy8010          86 GE   87 (87)
Q Consensus        86 aP   87 (87)
                      ||
T Consensus       183 aP  184 (317)
T cd07868         183 AP  184 (317)
T ss_pred             CC
Confidence            98

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p

>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma

Probab=99.58  E-value=4.9e-15  Score=92.36  Aligned_cols=72  Identities=17%  Similarity=0.338  Sum_probs=59.8

Q ss_pred             hcH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCC-CccccccccccccccC
Q psy8010          11 RIP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSR-DVDVREILGTPDYVGE   87 (87)
Q Consensus        11 ~~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~-~~~~~~~~gt~~y~aP   87 (87)
                      .++ +.+..++.|++.|+  .|+|+++++|+|+||+|++++.+   ..++++|||+++.... .......+||+.|+||
T Consensus        91 ~l~~~~~~~~~~qi~~aL--~~LH~~~ivHrDikp~NIll~~~---~~~kL~DfG~~~~~~~~~~~~~~~~gt~~y~aP  164 (328)
T cd05593          91 VFSEDRTRFYGAEIVSAL--DYLHSGKIVYRDLKLENLMLDKD---GHIKITDFGLCKEGITDAATMKTFCGTPEYLAP  164 (328)
T ss_pred             CCCHHHHHHHHHHHHHHH--HHHHhCCeEecccCHHHeEECCC---CcEEEecCcCCccCCCcccccccccCCcCccCh
Confidence            344 57888999999999  99999999999999999999875   7899999999875422 2233456899999998

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate

>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta

Probab=99.58  E-value=4.7e-15  Score=92.10  Aligned_cols=72  Identities=22%  Similarity=0.387  Sum_probs=60.6

Q ss_pred             hcH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecC-CCccccccccccccccC
Q psy8010          11 RIP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLS-RDVDVREILGTPDYVGE   87 (87)
Q Consensus        11 ~~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~-~~~~~~~~~gt~~y~aP   87 (87)
                      .++ ..+..++.|++.++  .|+|+++++|+|++|+|++++.+   ..++++|||++.... ........+||+.|+||
T Consensus        97 ~~~~~~~~~~~~qi~~aL--~~LH~~~ivHrDlkp~Nill~~~---~~~kL~DfG~~~~~~~~~~~~~~~~gt~~y~aP  170 (323)
T cd05616          97 RFKEPHAVFYAAEIAIGL--FFLHSKGIIYRDLKLDNVMLDSE---GHIKIADFGMCKENMWDGVTTKTFCGTPDYIAP  170 (323)
T ss_pred             CCCHHHHHHHHHHHHHHH--HHHHHCCEEecCCCHHHeEECCC---CcEEEccCCCceecCCCCCccccCCCChhhcCH
Confidence            345 57889999999999  99999999999999999999885   789999999987643 23334567899999998

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and

>KOG0695|consensus

Probab=99.57  E-value=3.6e-15  Score=93.63  Aligned_cols=79  Identities=20%  Similarity=0.386  Sum_probs=69.5

Q ss_pred             HHHHHhhhcH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeecccee-cCCCccccccccc
Q psy8010           4 FIITLVARIP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRH-LSRDVDVREILGT   81 (87)
Q Consensus         4 ~~~~~~~~~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~-~~~~~~~~~~~gt   81 (87)
                      |..+...++| |.++.+..+++.++  .|+|+.|++.||+|..|++++..   +.+|+.|+|+++. +.++....++|||
T Consensus       340 fhmqrqrklpeeharfys~ei~lal--~flh~rgiiyrdlkldnvlldae---ghikltdygmcke~l~~gd~tstfcgt  414 (593)
T KOG0695|consen  340 FHMQRQRKLPEEHARFYSAEICLAL--NFLHERGIIYRDLKLDNVLLDAE---GHIKLTDYGMCKEGLGPGDTTSTFCGT  414 (593)
T ss_pred             eehhhhhcCcHHHhhhhhHHHHHHH--HHHhhcCeeeeeccccceEEccC---CceeecccchhhcCCCCCcccccccCC
Confidence            3445556677 68999999999999  99999999999999999999986   8999999999885 4667778899999


Q ss_pred             cccccC
Q psy8010          82 PDYVGE   87 (87)
Q Consensus        82 ~~y~aP   87 (87)
                      |.|+||
T Consensus       415 pnyiap  420 (593)
T KOG0695|consen  415 PNYIAP  420 (593)
T ss_pred             Ccccch
Confidence            999998

>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta

Probab=99.57  E-value=5.3e-15  Score=92.12  Aligned_cols=72  Identities=18%  Similarity=0.362  Sum_probs=60.6

Q ss_pred             hcH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceec-CCCccccccccccccccC
Q psy8010          11 RIP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHL-SRDVDVREILGTPDYVGE   87 (87)
Q Consensus        11 ~~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~-~~~~~~~~~~gt~~y~aP   87 (87)
                      .++ +.+..++.|++.++  .|+|+++++|+|++|+|++++.+   ..++++|||++... .........+||+.|+||
T Consensus        92 ~l~~~~~~~~~~qi~~al--~~lH~~~ivHrDlkp~Nili~~~---~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aP  165 (327)
T cd05617          92 KLPEEHARFYAAEICIAL--NFLHERGIIYRDLKLDNVLLDAD---GHIKLTDYGMCKEGLGPGDTTSTFCGTPNYIAP  165 (327)
T ss_pred             CCCHHHHHHHHHHHHHHH--HHHHHCCeeccCCCHHHEEEeCC---CCEEEeccccceeccCCCCceecccCCcccCCH
Confidence            455 57889999999999  99999999999999999999885   78999999998753 223334567899999997

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways

>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C

Probab=99.57  E-value=6.8e-15  Score=91.40  Aligned_cols=72  Identities=21%  Similarity=0.359  Sum_probs=59.9

Q ss_pred             hcH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecC-CCccccccccccccccC
Q psy8010          11 RIP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLS-RDVDVREILGTPDYVGE   87 (87)
Q Consensus        11 ~~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~-~~~~~~~~~gt~~y~aP   87 (87)
                      .++ +.+..++.|++.++  .|+|+++++|+|++|+|++++.+   ..++++|||++.... ........+||+.|+||
T Consensus        97 ~~~~~~~~~~~~qi~~al--~~lH~~~ivH~dlkp~Nill~~~---~~~kL~Dfg~~~~~~~~~~~~~~~~gt~~y~aP  170 (324)
T cd05587          97 KFKEPHAVFYAAEIAIGL--FFLHSKGIIYRDLKLDNVMLDAE---GHIKIADFGMCKENIFGGKTTRTFCGTPDYIAP  170 (324)
T ss_pred             CCCHHHHHHHHHHHHHHH--HHHHHCCeEecCCCHHHeEEcCC---CCEEEeecCcceecCCCCCceeeecCCccccCh
Confidence            344 57888999999999  99999999999999999999885   789999999987542 23334556899999998

Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory

>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1

Probab=99.57  E-value=6e-15  Score=92.88  Aligned_cols=69  Identities=17%  Similarity=0.350  Sum_probs=59.7

Q ss_pred             HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCccccccccccccccC
Q psy8010          14 RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDVDVREILGTPDYVGE   87 (87)
Q Consensus        14 ~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~~~~~~~gt~~y~aP   87 (87)
                      +.+..++.|++.|+  .|+|+++++|+|++|+|++++.+   ..++++|||+++............||+.|+||
T Consensus       126 ~~~~~~~~qi~~aL--~~LH~~~ivH~Dlkp~NIll~~~---~~~kL~DfG~a~~~~~~~~~~~~~~t~~y~aP  194 (364)
T cd07875         126 ERMSYLLYQMLCGI--KHLHSAGIIHRDLKPSNIVVKSD---CTLKILDFGLARTAGTSFMMTPYVVTRYYRAP  194 (364)
T ss_pred             HHHHHHHHHHHHHH--HHHhhCCeecCCCCHHHEEECCC---CcEEEEeCCCccccCCCCcccCCcccCCcCCH
Confidence            46788999999999  99999999999999999999885   78999999999876544444566899999997

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1

Probab=99.57  E-value=6.7e-15  Score=93.21  Aligned_cols=71  Identities=23%  Similarity=0.444  Sum_probs=59.9

Q ss_pred             cH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCc--cccccccccccccC
Q psy8010          12 IP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDV--DVREILGTPDYVGE   87 (87)
Q Consensus        12 ~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~--~~~~~~gt~~y~aP   87 (87)
                      ++ +.+..++.|++.++  .++|+++++|+|++|+|++++.+   ..++++|||++.......  .....+||+.||||
T Consensus       139 ~~~~~~~~~~~qi~~aL--~~LH~~~ivHrDLkp~NIll~~~---~~ikL~DfG~a~~~~~~~~~~~~~~~gt~~y~aP  212 (371)
T cd05622         139 VPEKWARFYTAEVVLAL--DAIHSMGFIHRDVKPDNMLLDKS---GHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISP  212 (371)
T ss_pred             CCHHHHHHHHHHHHHHH--HHHHHCCEEeCCCCHHHEEECCC---CCEEEEeCCceeEcCcCCcccccCcccCccccCH
Confidence            44 46788899999999  99999999999999999999874   789999999998764332  22456899999998

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an

>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha

Probab=99.57  E-value=1.1e-14  Score=90.51  Aligned_cols=72  Identities=17%  Similarity=0.349  Sum_probs=59.6

Q ss_pred             hcH-HHHHHHHHHHHHHHHHHHhhh-CCceecCCCCCceEeeeCCCCCcEEEEeeccceecC-CCccccccccccccccC
Q psy8010          11 RIP-RLVAKVTVTLLGSLNHHFTST-HSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLS-RDVDVREILGTPDYVGE   87 (87)
Q Consensus        11 ~~~-~~~~~~~~q~~~~l~~~~~h~-~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~-~~~~~~~~~gt~~y~aP   87 (87)
                      .++ +.+..++.|++.++  .|+|+ .+++|+|++|+|++++.+   ..++++|||++.... ........+||+.|+||
T Consensus        91 ~l~~~~~~~~~~qi~~aL--~~lH~~~~ivHrDikp~NIll~~~---~~~kL~Dfg~~~~~~~~~~~~~~~~gt~~y~aP  165 (325)
T cd05594          91 VFSEDRARFYGAEIVSAL--DYLHSEKNVVYRDLKLENLMLDKD---GHIKITDFGLCKEGIKDGATMKTFCGTPEYLAP  165 (325)
T ss_pred             CCCHHHHHHHHHHHHHHH--HHHHhcCCEEecCCCCCeEEECCC---CCEEEecCCCCeecCCCCcccccccCCcccCCH
Confidence            345 57888999999999  99997 799999999999999875   789999999987643 23333456899999998

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien

>PLN03225 Serine/threonine-protein kinase SNT7; Provisional

Probab=99.57  E-value=6.7e-15  Score=97.66  Aligned_cols=69  Identities=19%  Similarity=0.361  Sum_probs=57.3

Q ss_pred             HHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCcc--ccccccccccccC
Q psy8010          15 LVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDVD--VREILGTPDYVGE   87 (87)
Q Consensus        15 ~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~~--~~~~~gt~~y~aP   87 (87)
                      .+..++.|++.++  .|+|+++++|||+||+|++++..  ...+|++|||++..+..+..  ....+|++.||||
T Consensus       256 ~i~~i~~qll~aL--~yLH~~gIiHRDLKP~NILl~~~--~~~~KL~DFGlA~~l~~~~~~~~~~~~~t~~Y~AP  326 (566)
T PLN03225        256 IIQTIMRQILFAL--DGLHSTGIVHRDVKPQNIIFSEG--SGSFKIIDLGAAADLRVGINYIPKEFLLDPRYAAP  326 (566)
T ss_pred             HHHHHHHHHHHHH--HHHHHCCEEeCcCCHHHEEEeCC--CCcEEEEeCCCccccccccccCCcccccCCCccCh
Confidence            4667899999999  99999999999999999999864  36799999999986543322  2457889999998

>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase

Probab=99.57  E-value=7.3e-15  Score=91.23  Aligned_cols=72  Identities=19%  Similarity=0.372  Sum_probs=59.8

Q ss_pred             hcH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCC-CccccccccccccccC
Q psy8010          11 RIP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSR-DVDVREILGTPDYVGE   87 (87)
Q Consensus        11 ~~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~-~~~~~~~~gt~~y~aP   87 (87)
                      .++ +.+..++.|++.++  .|+|+++++|+|++|.|++++.+   ..++++|||++..... .......+||+.|+||
T Consensus        92 ~~~~~~~~~~~~qi~~~l--~~lH~~givH~dikp~NIll~~~---~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aP  165 (323)
T cd05575          92 SFPEPRARFYAAEIASAL--GYLHSLNIIYRDLKPENILLDSQ---GHVVLTDFGLCKEGIEHSKTTSTFCGTPEYLAP  165 (323)
T ss_pred             CCCHHHHHHHHHHHHHHH--HHHHHCCeEeCCCCHHHeEECCC---CcEEEeccCCCcccccCCCccccccCChhhcCh
Confidence            445 47888999999999  99999999999999999999875   7899999999875422 2233456899999998

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr

>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases

Probab=99.57  E-value=7.2e-15  Score=90.90  Aligned_cols=72  Identities=25%  Similarity=0.421  Sum_probs=59.9

Q ss_pred             hcH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCC-CccccccccccccccC
Q psy8010          11 RIP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSR-DVDVREILGTPDYVGE   87 (87)
Q Consensus        11 ~~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~-~~~~~~~~gt~~y~aP   87 (87)
                      +++ ..+..++.|++.++  .|+|+++++|+|++|.|++++.+   ..++++|||+++.... .......+||+.|+||
T Consensus        89 ~~~~~~~~~~~~qi~~~l--~~lH~~~i~HrDlkp~Nili~~~---~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aP  162 (312)
T cd05585          89 RFDLSRARFYTAELLCAL--ENLHKFNVIYRDLKPENILLDYQ---GHIALCDFGLCKLNMKDDDKTNTFCGTPEYLAP  162 (312)
T ss_pred             CCCHHHHHHHHHHHHHHH--HHHHhCCeEeCCCCHHHeEECCC---CcEEEEECcccccCccCCCccccccCCcccCCH
Confidence            345 57888999999999  99999999999999999999875   7899999999875432 2233456899999998

Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl

>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional

Probab=99.56  E-value=6.3e-15  Score=92.43  Aligned_cols=70  Identities=20%  Similarity=0.423  Sum_probs=59.7

Q ss_pred             hcH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCccccccccccccccC
Q psy8010          11 RIP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDVDVREILGTPDYVGE   87 (87)
Q Consensus        11 ~~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~~~~~~~gt~~y~aP   87 (87)
                      .++ +.+..++.|++.++  .|+|+.+++|+|++|+|++++.+   ..++++|||++.....  .....+||+.||||
T Consensus       127 ~~~~~~~~~~~~qi~~aL--~~LH~~~ivHrDLkp~NILl~~~---~~ikL~DFG~a~~~~~--~~~~~~gt~~y~aP  197 (340)
T PTZ00426        127 RFPNDVGCFYAAQIVLIF--EYLQSLNIVYRDLKPENLLLDKD---GFIKMTDFGFAKVVDT--RTYTLCGTPEYIAP  197 (340)
T ss_pred             CCCHHHHHHHHHHHHHHH--HHHHHCCeEccCCCHHHEEECCC---CCEEEecCCCCeecCC--CcceecCChhhcCH
Confidence            355 47888999999999  99999999999999999999874   7899999999987533  23456899999998

>PHA02882 putative serine/threonine kinase; Provisional

Probab=99.56  E-value=8e-15  Score=90.06  Aligned_cols=69  Identities=22%  Similarity=0.398  Sum_probs=56.9

Q ss_pred             HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCc--------cccccccccccc
Q psy8010          14 RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDV--------DVREILGTPDYV   85 (87)
Q Consensus        14 ~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~--------~~~~~~gt~~y~   85 (87)
                      +.+..++.|++.++  .|+|+.+++|||+||+|++++.+   ..++++|||+++.+....        ......||+.|+
T Consensus       126 ~~~~~i~~qi~~~l--~~lH~~~iiHrDiKp~Nill~~~---~~~~l~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~  200 (294)
T PHA02882        126 KLIKNIMKDMLTTL--EYIHEHGISHGDIKPENIMVDGN---NRGYIIDYGIASHFIIHGKHIEYSKEQKDLHRGTLYYA  200 (294)
T ss_pred             HHHHHHHHHHHHHH--HHHHhCCeecCCCCHHHEEEcCC---CcEEEEEcCCceeeccCCcccccccccccccCCCcccc
Confidence            46788999999999  99999999999999999999874   689999999998763221        112347999999


Q ss_pred             cC
Q psy8010          86 GE   87 (87)
Q Consensus        86 aP   87 (87)
                      ||
T Consensus       201 ap  202 (294)
T PHA02882        201 GL  202 (294)
T ss_pred             CH
Confidence            87

>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3

Probab=99.56  E-value=7.8e-15  Score=91.18  Aligned_cols=72  Identities=19%  Similarity=0.368  Sum_probs=60.1

Q ss_pred             hcH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecC-CCccccccccccccccC
Q psy8010          11 RIP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLS-RDVDVREILGTPDYVGE   87 (87)
Q Consensus        11 ~~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~-~~~~~~~~~gt~~y~aP   87 (87)
                      .++ +.+..++.|++.++  .|+|+.|++|+|++|.|++++.+   ..++++|||++.... ........+||+.|+||
T Consensus        92 ~~~~~~~~~~~~qi~~al--~~lH~~givH~Dlkp~NIll~~~---~~~kL~DfG~~~~~~~~~~~~~~~~gt~~y~aP  165 (325)
T cd05604          92 SFPEPRARFYAAEIASAL--GYLHSINIVYRDLKPENILLDSQ---GHVVLTDFGLCKEGIAQSDTTTTFCGTPEYLAP  165 (325)
T ss_pred             CCCHHHHHHHHHHHHHHH--HHHHHCCeeecCCCHHHeEECCC---CCEEEeecCCcccCCCCCCCcccccCChhhCCH
Confidence            345 57888999999999  99999999999999999999885   789999999987532 22333556899999998

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,

>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C

Probab=99.56  E-value=6.3e-15  Score=91.82  Aligned_cols=73  Identities=19%  Similarity=0.357  Sum_probs=61.1

Q ss_pred             hhcH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceec-CCCccccccccccccccC
Q psy8010          10 ARIP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHL-SRDVDVREILGTPDYVGE   87 (87)
Q Consensus        10 ~~~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~-~~~~~~~~~~gt~~y~aP   87 (87)
                      ++++ +.+..++.|++.++  .|+|+++++|+|++|+|++++.+   ..++++|||++... .........+||+.|+||
T Consensus        91 ~~l~~~~~~~~~~qi~~~l--~~lH~~~ivH~dlkp~Nili~~~---~~~kL~Dfg~~~~~~~~~~~~~~~~gt~~y~aP  165 (329)
T cd05588          91 RKLPEEHARFYSAEISLAL--NFLHERGIIYRDLKLDNVLLDAE---GHIKLTDYGMCKEGIRPGDTTSTFCGTPNYIAP  165 (329)
T ss_pred             CCCCHHHHHHHHHHHHHHH--HHHHHCCeEecCCCHHHeEECCC---CCEEECcCccccccccCCCccccccCCccccCH
Confidence            3455 57889999999999  99999999999999999999875   78999999998753 233344567899999997

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl

>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta

Probab=99.56  E-value=7.6e-15  Score=91.27  Aligned_cols=72  Identities=17%  Similarity=0.350  Sum_probs=60.0

Q ss_pred             hcH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecC-CCccccccccccccccC
Q psy8010          11 RIP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLS-RDVDVREILGTPDYVGE   87 (87)
Q Consensus        11 ~~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~-~~~~~~~~~gt~~y~aP   87 (87)
                      .++ +.+..++.|++.++  .|+|+++++|+|++|+|++++.+   ..++++|||++.... .........||+.|+||
T Consensus        91 ~~~~~~~~~~~~qi~~aL--~~LH~~~ivH~Dlkp~NIll~~~---~~~kL~Dfg~~~~~~~~~~~~~~~~gt~~y~aP  164 (323)
T cd05595          91 VFTEERARFYGAEIVSAL--EYLHSRDVVYRDIKLENLMLDKD---GHIKITDFGLCKEGISDGATMKTFCGTPEYLAP  164 (323)
T ss_pred             CCCHHHHHHHHHHHHHHH--HHHHHCCeEecCCCHHHEEEcCC---CCEEecccHHhccccCCCCccccccCCcCcCCc
Confidence            345 57889999999999  99999999999999999999875   789999999987542 22333456899999998

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in

>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta

Probab=99.56  E-value=8.5e-15  Score=90.97  Aligned_cols=72  Identities=22%  Similarity=0.338  Sum_probs=59.9

Q ss_pred             hcH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecC-CCccccccccccccccC
Q psy8010          11 RIP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLS-RDVDVREILGTPDYVGE   87 (87)
Q Consensus        11 ~~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~-~~~~~~~~~gt~~y~aP   87 (87)
                      +++ +.+..++.|++.++  .|+|+++++|+|++|.|++++.+   ..++++|||++.... ........+||+.|+||
T Consensus        92 ~l~~~~~~~~~~ql~~~L--~~lH~~~ivH~dlkp~NIli~~~---~~~kL~DfG~~~~~~~~~~~~~~~~gt~~y~aP  165 (320)
T cd05590          92 RFDEARARFYAAEITSAL--MFLHDKGIIYRDLKLDNVLLDHE---GHCKLADFGMCKEGIFNGKTTSTFCGTPDYIAP  165 (320)
T ss_pred             CCCHHHHHHHHHHHHHHH--HHHHHCCeEeCCCCHHHeEECCC---CcEEEeeCCCCeecCcCCCcccccccCccccCH
Confidence            345 57888999999999  99999999999999999999885   789999999987642 22333456899999998

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal

>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon

Probab=99.56  E-value=8.8e-15  Score=90.80  Aligned_cols=72  Identities=24%  Similarity=0.352  Sum_probs=59.8

Q ss_pred             hcH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecC-CCccccccccccccccC
Q psy8010          11 RIP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLS-RDVDVREILGTPDYVGE   87 (87)
Q Consensus        11 ~~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~-~~~~~~~~~gt~~y~aP   87 (87)
                      .++ +.+..++.|++.++  .|+|+++++|+|++|+|++++.+   ..++++|||++.... ........+||+.|+||
T Consensus        92 ~~~~~~~~~~~~qi~~aL--~~LH~~~ivHrDikp~Nill~~~---~~~kL~Dfg~~~~~~~~~~~~~~~~gt~~y~aP  165 (321)
T cd05591          92 KFDEPRSRFYAAEVTLAL--MFLHRHGVIYRDLKLDNILLDAE---GHCKLADFGMCKEGILNGVTTTTFCGTPDYIAP  165 (321)
T ss_pred             CCCHHHHHHHHHHHHHHH--HHHHHCCeeccCCCHHHeEECCC---CCEEEeecccceecccCCccccccccCccccCH
Confidence            344 47888999999999  99999999999999999999875   789999999987643 22233456899999997

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to

>PHA03211 serine/threonine kinase US3; Provisional

Probab=99.56  E-value=7.9e-15  Score=95.39  Aligned_cols=72  Identities=21%  Similarity=0.277  Sum_probs=59.8

Q ss_pred             hcH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCcc---cccccccccccc
Q psy8010          11 RIP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDVD---VREILGTPDYVG   86 (87)
Q Consensus        11 ~~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~~---~~~~~gt~~y~a   86 (87)
                      .++ .++..++.|++.+|  .|+|+++++|+|+||+||+++..   ..++++|||+++.+.....   .....||+.|+|
T Consensus       256 ~l~~~~~~~i~~qi~~aL--~yLH~~gIvHrDLKP~NILl~~~---~~vkL~DFGla~~~~~~~~~~~~~~~~GT~~Y~A  330 (461)
T PHA03211        256 PLGLAQVTAVARQLLSAI--DYIHGEGIIHRDIKTENVLVNGP---EDICLGDFGAACFARGSWSTPFHYGIAGTVDTNA  330 (461)
T ss_pred             CCCHHHHHHHHHHHHHHH--HHHHHCCEEECcCCHHHEEECCC---CCEEEcccCCceecccccccccccccCCCcCCcC
Confidence            455 57889999999999  99999999999999999999875   7899999999986533221   234579999999


Q ss_pred             C
Q psy8010          87 E   87 (87)
Q Consensus        87 P   87 (87)
                      |
T Consensus       331 P  331 (461)
T PHA03211        331 P  331 (461)
T ss_pred             H
Confidence            7

>KOG0665|consensus

Probab=99.56  E-value=7.5e-15  Score=90.79  Aligned_cols=69  Identities=19%  Similarity=0.382  Sum_probs=62.2

Q ss_pred             HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCccccccccccccccC
Q psy8010          14 RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDVDVREILGTPDYVGE   87 (87)
Q Consensus        14 ~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~~~~~~~gt~~y~aP   87 (87)
                      +.+.++..|++.++  .++|+.|++|||+||+|+++..+   +.+|+.|||+++.-..+-..+.++.|.+|+||
T Consensus       118 ~tis~i~yq~~~~i--k~lhs~~IihRdLkPsnivv~~~---~~lKi~dfg~ar~e~~~~~mtpyVvtRyyrap  186 (369)
T KOG0665|consen  118 ETISYILYQMLCGI--KHLHSAGIIHRDLKPSNIVVNSD---CTLKILDFGLARTEDTDFMMTPYVVTRYYRAP  186 (369)
T ss_pred             HHHHHHHHHHHHHH--HHHHhcceeecccCcccceecch---hheeeccchhhcccCcccccCchhheeeccCc
Confidence            56889999999999  99999999999999999999995   89999999999976555456789999999998

>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2

Probab=99.55  E-value=9e-15  Score=90.70  Aligned_cols=72  Identities=17%  Similarity=0.313  Sum_probs=59.4

Q ss_pred             hcH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecC-CCccccccccccccccC
Q psy8010          11 RIP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLS-RDVDVREILGTPDYVGE   87 (87)
Q Consensus        11 ~~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~-~~~~~~~~~gt~~y~aP   87 (87)
                      .++ +.+..++.|++.++  .|+|+.+++|+|++|+|++++.+   ..++++|||++.... ........+||+.|+||
T Consensus        92 ~~~~~~~~~~~~qi~~~L--~~lH~~~ivH~Dlkp~NIll~~~---~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aP  165 (321)
T cd05603          92 CFLEPRARFYAAEVASAI--GYLHSLNIIYRDLKPENILLDSQ---GHVVLTDFGLCKEGVEPEETTSTFCGTPEYLAP  165 (321)
T ss_pred             CCCHHHHHHHHHHHHHHH--HHHHHCCeEeccCCHHHeEECCC---CCEEEccCCCCccCCCCCCccccccCCcccCCH
Confidence            344 57888999999999  99999999999999999999885   789999999987532 22233456899999998

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.

>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota

Probab=99.55  E-value=9.7e-15  Score=91.04  Aligned_cols=72  Identities=18%  Similarity=0.347  Sum_probs=60.1

Q ss_pred             hcH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecC-CCccccccccccccccC
Q psy8010          11 RIP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLS-RDVDVREILGTPDYVGE   87 (87)
Q Consensus        11 ~~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~-~~~~~~~~~gt~~y~aP   87 (87)
                      .++ +.+..++.|++.++  .|+|+++++|+|++|+|++++.+   ..++++|||++.... ........+||+.|+||
T Consensus        92 ~l~~~~~~~i~~qi~~~l--~~lH~~~ivH~Dikp~Nili~~~---~~~kL~DfG~~~~~~~~~~~~~~~~gt~~y~aP  165 (329)
T cd05618          92 KLPEEHARFYSAEISLAL--NYLHERGIIYRDLKLDNVLLDSE---GHIKLTDYGMCKEGLRPGDTTSTFCGTPNYIAP  165 (329)
T ss_pred             CCCHHHHHHHHHHHHHHH--HHHHHCCeeeCCCCHHHEEECCC---CCEEEeeCCccccccCCCCccccccCCccccCH
Confidence            455 57888999999999  99999999999999999999885   789999999987542 22333456899999997

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o

>PHA03210 serine/threonine kinase US3; Provisional

Probab=99.55  E-value=9.9e-15  Score=95.62  Aligned_cols=69  Identities=16%  Similarity=0.244  Sum_probs=58.7

Q ss_pred             HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCcc--ccccccccccccC
Q psy8010          14 RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDVD--VREILGTPDYVGE   87 (87)
Q Consensus        14 ~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~~--~~~~~gt~~y~aP   87 (87)
                      +.+..++.|++.+|  .|+|+++++|+|+||.|++++.+   ..+|++|||++..+.....  ....+||+.|+||
T Consensus       267 ~~~~~i~~ql~~aL--~yLH~~gIiHrDLKP~NILl~~~---~~vkL~DFGla~~~~~~~~~~~~~~~gt~~y~aP  337 (501)
T PHA03210        267 KQTRAIMKQLLCAV--EYIHDKKLIHRDIKLENIFLNCD---GKIVLGDFGTAMPFEKEREAFDYGWVGTVATNSP  337 (501)
T ss_pred             HHHHHHHHHHHHHH--HHHHhCCeecCCCCHHHEEECCC---CCEEEEeCCCceecCcccccccccccCCcCCCCc
Confidence            46778999999999  99999999999999999999875   7899999999987644322  2346899999998

>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha

Probab=99.55  E-value=9.3e-15  Score=90.88  Aligned_cols=72  Identities=22%  Similarity=0.379  Sum_probs=60.1

Q ss_pred             hcH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCC-CccccccccccccccC
Q psy8010          11 RIP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSR-DVDVREILGTPDYVGE   87 (87)
Q Consensus        11 ~~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~-~~~~~~~~gt~~y~aP   87 (87)
                      .++ +++..++.|++.|+  .|+|+++++|+|++|+|++++.+   ..++++|||++..... .......+||+.|+||
T Consensus        97 ~l~~~~~~~i~~qi~~al--~~lH~~~ivHrDikp~Nill~~~---~~ikL~Dfg~~~~~~~~~~~~~~~~gt~~y~aP  170 (323)
T cd05615          97 KFKEPQAVFYAAEISVGL--FFLHRRGIIYRDLKLDNVMLDSE---GHIKIADFGMCKEHMVDGVTTRTFCGTPDYIAP  170 (323)
T ss_pred             CCCHHHHHHHHHHHHHHH--HHHHHCCeeccCCCHHHeEECCC---CCEEEeccccccccCCCCccccCccCCccccCH
Confidence            455 57889999999999  99999999999999999999875   7899999999875432 2233456799999997

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a

>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases

Probab=99.55  E-value=7.1e-15  Score=91.80  Aligned_cols=56  Identities=18%  Similarity=0.382  Sum_probs=49.5

Q ss_pred             hcH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCC
Q psy8010          11 RIP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSR   71 (87)
Q Consensus        11 ~~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~   71 (87)
                      .++ +.+..++.|++.++  .|+|+.|++|+|++|+|++++.+   ..++++|||++.....
T Consensus        97 ~l~~~~~~~i~~qi~~aL--~~LH~~giiH~Dlkp~NIll~~~---~~~kL~Dfg~~~~~~~  153 (350)
T cd05573          97 VFPEETARFYIAELVLAL--DSVHKLGFIHRDIKPDNILIDAD---GHIKLADFGLCKKMNK  153 (350)
T ss_pred             CCCHHHHHHHHHHHHHHH--HHHHHCCeeccCCCHHHeEECCC---CCEEeecCCCCccCcc
Confidence            455 57888999999999  99999999999999999999885   7899999999886543

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the

>PTZ00263 protein kinase A catalytic subunit; Provisional

Probab=99.55  E-value=9.4e-15  Score=91.05  Aligned_cols=70  Identities=23%  Similarity=0.478  Sum_probs=59.5

Q ss_pred             hcH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCccccccccccccccC
Q psy8010          11 RIP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDVDVREILGTPDYVGE   87 (87)
Q Consensus        11 ~~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~~~~~~~gt~~y~aP   87 (87)
                      .++ +.+..++.|++.++  .|+|+++++|+|++|+|++++.+   ..++++|||++......  ....+||+.|+||
T Consensus       114 ~~~~~~~~~~~~qi~~aL--~~LH~~~ivH~dlkp~NIll~~~---~~~kl~Dfg~~~~~~~~--~~~~~gt~~y~aP  184 (329)
T PTZ00263        114 RFPNDVAKFYHAELVLAF--EYLHSKDIIYRDLKPENLLLDNK---GHVKVTDFGFAKKVPDR--TFTLCGTPEYLAP  184 (329)
T ss_pred             CCCHHHHHHHHHHHHHHH--HHHHHCCeeecCCCHHHEEECCC---CCEEEeeccCceEcCCC--cceecCChhhcCH
Confidence            345 57888899999999  99999999999999999999875   78999999999876432  2346899999997

>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase

Probab=99.55  E-value=1.5e-14  Score=89.86  Aligned_cols=69  Identities=19%  Similarity=0.289  Sum_probs=58.1

Q ss_pred             HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCC-CccccccccccccccC
Q psy8010          14 RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSR-DVDVREILGTPDYVGE   87 (87)
Q Consensus        14 ~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~-~~~~~~~~gt~~y~aP   87 (87)
                      +.+..++.|++.++  .|+|+.+++|+|++|.|++++.+   ..++++|||+++.... ........|++.|+||
T Consensus       100 ~~~~~~~~qi~~~l--~~lH~~~ivH~dlkp~Nil~~~~---~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aP  169 (323)
T cd05584         100 DTACFYLSEISLAL--EHLHQQGIIYRDLKPENILLDAQ---GHVKLTDFGLCKESIHEGTVTHTFCGTIEYMAP  169 (323)
T ss_pred             HHHHHHHHHHHHHH--HHHHHCCeecCCCCHHHeEECCC---CCEEEeeCcCCeecccCCCcccccCCCccccCh
Confidence            46788899999999  99999999999999999999874   7899999999875432 2233456899999998

Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in

>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases

Probab=99.55  E-value=1e-14  Score=90.84  Aligned_cols=69  Identities=17%  Similarity=0.391  Sum_probs=59.0

Q ss_pred             cH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCccccccccccccccC
Q psy8010          12 IP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDVDVREILGTPDYVGE   87 (87)
Q Consensus        12 ~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~~~~~~~gt~~y~aP   87 (87)
                      ++ +.+..++.|++.++  .++|+++++|+|++|+|++++..   ..++++|||++.....  .....+||+.|+||
T Consensus        98 l~~~~~~~~~~qi~~~l--~~lH~~~ivH~dlkp~Nil~~~~---~~~kL~Dfg~a~~~~~--~~~~~~gt~~y~aP  167 (333)
T cd05600          98 LSEDHARFYMAEMFEAV--DALHELGYIHRDLKPENFLIDAS---GHIKLTDFGLSKGIVT--YANSVVGSPDYMAP  167 (333)
T ss_pred             CCHHHHHHHHHHHHHHH--HHHHHCCccccCCCHHHEEECCC---CCEEEEeCcCCccccc--ccCCcccCccccCh
Confidence            44 57888999999999  99999999999999999999875   7899999999876533  33456899999998

Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.

>KOG0582|consensus

Probab=99.55  E-value=1.1e-14  Score=93.12  Aligned_cols=71  Identities=21%  Similarity=0.379  Sum_probs=59.9

Q ss_pred             cHH-HHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCC-Cccc----cccccccccc
Q psy8010          12 IPR-LVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSR-DVDV----REILGTPDYV   85 (87)
Q Consensus        12 ~~~-~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~-~~~~----~~~~gt~~y~   85 (87)
                      ++| .+..+.++++.||  .|+|.+|.+|||+|+.||+++.+   +.+|++|||.+-.+.. +.+.    .+++|||.||
T Consensus       123 l~E~~Ia~iLre~LkaL--~YLH~~G~IHRdvKAgnILi~~d---G~VkLadFgvsa~l~~~G~R~~~rf~tfvgtp~wm  197 (516)
T KOG0582|consen  123 LEEASIATILREVLKAL--DYLHQNGHIHRDVKAGNILIDSD---GTVKLADFGVSASLFDSGDRQVTRFNTFVGTPCWM  197 (516)
T ss_pred             ccHHHHHHHHHHHHHHH--HHHHhcCceecccccccEEEcCC---CcEEEcCceeeeeecccCceeeEeeccccCccccc
Confidence            444 6788999999999  99999999999999999999995   8999999998766532 2221    5679999999


Q ss_pred             cC
Q psy8010          86 GE   87 (87)
Q Consensus        86 aP   87 (87)
                      ||
T Consensus       198 AP  199 (516)
T KOG0582|consen  198 AP  199 (516)
T ss_pred             Ch
Confidence            98

>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1

Probab=99.55  E-value=1.1e-14  Score=92.19  Aligned_cols=52  Identities=19%  Similarity=0.344  Sum_probs=46.6

Q ss_pred             hcH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccce
Q psy8010          11 RIP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISR   67 (87)
Q Consensus        11 ~~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~   67 (87)
                      .++ +.++.++.|++.++  .|+|+++++|+|+||+|++++.+   +.++++|||++.
T Consensus        97 ~~~e~~~~~~~~qi~~al--~~lH~~~ivHrDlKp~NILl~~~---g~~kL~DFGla~  149 (382)
T cd05625          97 IFPEDLARFYIAELTCAV--ESVHKMGFIHRDIKPDNILIDRD---GHIKLTDFGLCT  149 (382)
T ss_pred             CCCHHHHHHHHHHHHHHH--HHHHhCCeecCCCCHHHEEECCC---CCEEEeECCCCc
Confidence            345 57888999999999  99999999999999999999875   789999999875

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an

>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4

Probab=99.55  E-value=1.1e-14  Score=88.75  Aligned_cols=71  Identities=24%  Similarity=0.421  Sum_probs=60.6

Q ss_pred             cH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCccccccccccccccC
Q psy8010          12 IP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDVDVREILGTPDYVGE   87 (87)
Q Consensus        12 ~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~~~~~~~gt~~y~aP   87 (87)
                      ++ +.+..++.|++.|+  .|+|+++++|+|++|.|++++.+   ..++++|||++.............|++.|+||
T Consensus       105 ~~~~~~~~~~~qi~~al--~~lH~~~ivH~dikp~Nili~~~---~~~kl~dfg~~~~~~~~~~~~~~~~~~~y~aP  176 (288)
T cd07863         105 LPAETIKDLMRQFLRGL--DFLHANCIVHRDLKPENILVTSG---GQVKLADFGLARIYSCQMALTPVVVTLWYRAP  176 (288)
T ss_pred             CCHHHHHHHHHHHHHHH--HHHHhCCeecCCCCHHHEEECCC---CCEEECccCccccccCcccCCCccccccccCc
Confidence            45 57899999999999  99999999999999999999875   78999999998876544444456788999998

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou

>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=99.55  E-value=1.1e-14  Score=91.63  Aligned_cols=54  Identities=19%  Similarity=0.259  Sum_probs=48.4

Q ss_pred             hcH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceec
Q psy8010          11 RIP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHL   69 (87)
Q Consensus        11 ~~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~   69 (87)
                      .++ +.+..++.|++.++  .|+|+.+++|+|++|+|++++.+   ..++++|||++..+
T Consensus        97 ~l~~~~~~~~~~qi~~aL--~~lH~~~ivH~Dlkp~NIl~~~~---~~~kl~Dfg~~~~~  151 (364)
T cd05599          97 TFTEEETRFYIAETILAI--DSIHKLGYIHRDIKPDNLLLDAK---GHIKLSDFGLCTGL  151 (364)
T ss_pred             CCCHHHHHHHHHHHHHHH--HHHHHCCeEeccCCHHHeEECCC---CCEEEeecccceec
Confidence            355 57889999999999  99999999999999999999885   78999999998754

Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica

>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta

Probab=99.55  E-value=1.2e-14  Score=90.09  Aligned_cols=72  Identities=21%  Similarity=0.384  Sum_probs=59.7

Q ss_pred             hcH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecC-CCccccccccccccccC
Q psy8010          11 RIP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLS-RDVDVREILGTPDYVGE   87 (87)
Q Consensus        11 ~~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~-~~~~~~~~~gt~~y~aP   87 (87)
                      +++ .++..++.|++.++  .|+|+++++|+|++|+|++++.+   ..++++|||+++... ........+||+.|+||
T Consensus        92 ~~~~~~~~~~~~qi~~~l--~~lH~~~ivHrDlkp~Nil~~~~---~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aP  165 (316)
T cd05620          92 RFDLYRATFYAAEIVCGL--QFLHSKGIIYRDLKLDNVMLDRD---GHIKIADFGMCKENVFGDNRASTFCGTPDYIAP  165 (316)
T ss_pred             CCCHHHHHHHHHHHHHHH--HHHHHCCeEecCCCHHHeEECCC---CCEEeCccCCCeecccCCCceeccCCCcCccCH
Confidence            445 47888999999999  99999999999999999999885   689999999987532 22233456899999998

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I

>PTZ00267 NIMA-related protein kinase; Provisional

Probab=99.55  E-value=1.5e-14  Score=94.29  Aligned_cols=71  Identities=23%  Similarity=0.308  Sum_probs=60.0

Q ss_pred             cH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCcc---ccccccccccccC
Q psy8010          12 IP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDVD---VREILGTPDYVGE   87 (87)
Q Consensus        12 ~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~~---~~~~~gt~~y~aP   87 (87)
                      ++ .++..++.|++.++  .++|+.+++|+|+||.||+++..   ..++++|||+++.+.....   ....+||+.|+||
T Consensus       166 l~~~~~~~i~~qi~~aL--~~lH~~~ivHrDlkp~NIll~~~---~~~kL~DFgla~~~~~~~~~~~~~~~~gt~~y~aP  240 (478)
T PTZ00267        166 FQEYEVGLLFYQIVLAL--DEVHSRKMMHRDLKSANIFLMPT---GIIKLGDFGFSKQYSDSVSLDVASSFCGTPYYLAP  240 (478)
T ss_pred             CCHHHHHHHHHHHHHHH--HHHHhCCEEECCcCHHhEEECCC---CcEEEEeCcCceecCCccccccccccCCCccccCH
Confidence            44 47888999999999  99999999999999999999875   7899999999987643322   3456899999998

>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=99.55  E-value=1.2e-14  Score=91.94  Aligned_cols=53  Identities=15%  Similarity=0.253  Sum_probs=47.1

Q ss_pred             hcH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeecccee
Q psy8010          11 RIP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRH   68 (87)
Q Consensus        11 ~~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~   68 (87)
                      .++ +.+..++.|++.++  .|+|+.+++|+|+||+|++++.+   ..++++|||++..
T Consensus        97 ~~~~~~~~~~~~ql~~aL--~~LH~~givHrDlkp~NIll~~~---~~~kl~DfGla~~  150 (377)
T cd05629          97 TFSEDVTRFYMAECVLAI--EAVHKLGFIHRDIKPDNILIDRG---GHIKLSDFGLSTG  150 (377)
T ss_pred             CCCHHHHHHHHHHHHHHH--HHHHhCCeeccCCCHHHEEECCC---CCEEEeecccccc
Confidence            344 57888999999999  99999999999999999999874   7899999999864

Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of

>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2

Probab=99.54  E-value=1.1e-14  Score=91.71  Aligned_cols=54  Identities=20%  Similarity=0.295  Sum_probs=47.9

Q ss_pred             hcH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceec
Q psy8010          11 RIP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHL   69 (87)
Q Consensus        11 ~~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~   69 (87)
                      .++ +.+..++.|++.++  .++|+.|++|+|+||+|++++.+   +.++++|||++..+
T Consensus        97 ~l~~~~~~~~~~qi~~~L--~~lH~~givHrDLkp~NIli~~~---~~vkL~DfG~~~~~  151 (360)
T cd05627          97 TLSEEATQFYIAETVLAI--DAIHQLGFIHRDIKPDNLLLDAK---GHVKLSDFGLCTGL  151 (360)
T ss_pred             CCCHHHHHHHHHHHHHHH--HHHHHCCeEccCCCHHHEEECCC---CCEEEeeccCCccc
Confidence            345 57889999999999  99999999999999999999874   78999999998654

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul

>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2

Probab=99.54  E-value=1.3e-14  Score=91.97  Aligned_cols=53  Identities=19%  Similarity=0.290  Sum_probs=46.7

Q ss_pred             hcH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeecccee
Q psy8010          11 RIP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRH   68 (87)
Q Consensus        11 ~~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~   68 (87)
                      .++ ..++.++.|++.++  .|+|..+++|+|+||+|++++..   ..++++|||++..
T Consensus        97 ~~~e~~~~~~~~qi~~aL--~~LH~~givHrDlKp~Nili~~~---~~~kL~DFGl~~~  150 (381)
T cd05626          97 VFPEVLARFYIAELTLAI--ESVHKMGFIHRDIKPDNILIDLD---GHIKLTDFGLCTG  150 (381)
T ss_pred             CCCHHHHHHHHHHHHHHH--HHHHhCCeeecCCcHHHEEECCC---CCEEEeeCcCCcc
Confidence            345 46888899999999  99999999999999999999874   7899999998753

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po

>PLN00181 protein SPA1-RELATED; Provisional

Probab=99.54  E-value=6.9e-15  Score=100.44  Aligned_cols=75  Identities=12%  Similarity=0.078  Sum_probs=55.8

Q ss_pred             hcH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeC----------------CCCCcEEEEeeccceecCCC-
Q psy8010          11 RIP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGE----------------YPDCDVKLCDFGISRHLSRD-   72 (87)
Q Consensus        11 ~~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~----------------~~~~~~kl~dfg~~~~~~~~-   72 (87)
                      .++ .++..++.|++.|+  .|+|++||+|||+||+||++...                +....+|++|||+++..... 
T Consensus        76 ~~~~~~~~~i~~qi~~al--~~lH~~gIvHrDlKP~NiLl~~~~~~k~~d~~~~~~~~~~~~~~~ki~DfG~a~~~~~~~  153 (793)
T PLN00181         76 SVDAFECFHVFRQIVEIV--NAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDEDATTKSREIGSSRREEILS  153 (793)
T ss_pred             cccHHHHHHHHHHHHHHH--HHHHhCCeeeccCCchhEEEcccCcEEEeeccccCcccccccCccccccccccccccccc
Confidence            355 57899999999999  99999999999999999999642                11356778888887643110 


Q ss_pred             ----------------ccccccccccccccC
Q psy8010          73 ----------------VDVREILGTPDYVGE   87 (87)
Q Consensus        73 ----------------~~~~~~~gt~~y~aP   87 (87)
                                      ......+||++||||
T Consensus       154 ~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~AP  184 (793)
T PLN00181        154 ERRIEKLEEVKKQPFPMKQILAMEMSWYTSP  184 (793)
T ss_pred             ccchhhhhccccCCCcccccccCCCcceECh
Confidence                            001124789999998

>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase

Probab=99.54  E-value=1.4e-14  Score=91.63  Aligned_cols=71  Identities=24%  Similarity=0.429  Sum_probs=59.6

Q ss_pred             cH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCc--cccccccccccccC
Q psy8010          12 IP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDV--DVREILGTPDYVGE   87 (87)
Q Consensus        12 ~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~--~~~~~~gt~~y~aP   87 (87)
                      ++ +.+..++.|++.|+  .|+|+++++|+|++|+|++++.+   ..++++|||++.......  .....+||+.|+||
T Consensus       139 l~~~~~~~~~~qi~~aL--~~LH~~~ivHrDLkp~NILl~~~---~~~kL~DfG~~~~~~~~~~~~~~~~~gt~~y~aP  212 (370)
T cd05596         139 IPEKWARFYTAEVVLAL--DAIHSMGFIHRDVKPDNMLLDKS---GHLKLADFGTCMKMDANGMVRCDTAVGTPDYISP  212 (370)
T ss_pred             CCHHHHHHHHHHHHHHH--HHHHHCCeeccCCCHHHEEEcCC---CCEEEEeccceeeccCCCcccCCCCCCCcCeECH
Confidence            44 46788899999999  99999999999999999999885   789999999988764332  22456899999998

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in

>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase

Probab=99.54  E-value=1.7e-14  Score=90.07  Aligned_cols=70  Identities=19%  Similarity=0.441  Sum_probs=59.8

Q ss_pred             hcH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCccccccccccccccC
Q psy8010          11 RIP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDVDVREILGTPDYVGE   87 (87)
Q Consensus        11 ~~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~~~~~~~gt~~y~aP   87 (87)
                      .++ +.+..++.|++.++  .|+|+++++|+|++|.|++++.+   ..++++|||++.....  ......||+.|+||
T Consensus       114 ~l~~~~~~~i~~qi~~aL--~~LH~~~ivHrdikp~Nil~~~~---~~~kl~Dfg~~~~~~~--~~~~~~~t~~y~aP  184 (343)
T cd07878         114 KLSDEHVQFLIYQLLRGL--KYIHSAGIIHRDLKPSNVAVNED---CELRILDFGLARQADD--EMTGYVATRWYRAP  184 (343)
T ss_pred             CCCHHHHHHHHHHHHHHH--HHHHHCCeecccCChhhEEECCC---CCEEEcCCccceecCC--CcCCccccccccCc
Confidence            355 57889999999999  99999999999999999999875   7899999999987543  23456889999998

Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is

>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants

Probab=99.54  E-value=1.2e-14  Score=90.23  Aligned_cols=71  Identities=23%  Similarity=0.438  Sum_probs=58.9

Q ss_pred             cH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCc----ccccccccccccc
Q psy8010          12 IP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDV----DVREILGTPDYVG   86 (87)
Q Consensus        12 ~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~----~~~~~~gt~~y~a   86 (87)
                      ++ +.+..++.|++.|+  .|+|+++++|+|++|+|++++.+   ..++++|||+++......    .....+|++.|+|
T Consensus       100 ~~~~~~~~i~~qi~~aL--~~LH~~~ivH~dlkp~NIll~~~---~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~t~~y~a  174 (338)
T cd07859         100 LTPEHHQFFLYQLLRAL--KYIHTANVFHRDLKPKNILANAD---CKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRA  174 (338)
T ss_pred             CCHHHHHHHHHHHHHHH--HHHHHCCeecCCCCHHHeEECCC---CcEEEccCccccccccccCccccccCCCCCCCcCC
Confidence            44 57888999999999  99999999999999999999875   789999999987642221    1234689999999


Q ss_pred             C
Q psy8010          87 E   87 (87)
Q Consensus        87 P   87 (87)
                      |
T Consensus       175 P  175 (338)
T cd07859         175 P  175 (338)
T ss_pred             H
Confidence            8

Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos

>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor

Probab=99.53  E-value=2.1e-14  Score=90.73  Aligned_cols=52  Identities=17%  Similarity=0.298  Sum_probs=46.2

Q ss_pred             hcH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccce
Q psy8010          11 RIP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISR   67 (87)
Q Consensus        11 ~~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~   67 (87)
                      .++ +.+..++.|++.++  .|+|+++++|+|+||+|++++..   ..++++|||++.
T Consensus        97 ~~~~~~~~~~~~qi~~al--~~lH~~~ivHrDlkp~Nill~~~---~~ikL~DFG~a~  149 (376)
T cd05598          97 IFEEDLARFYIAELTCAI--ESVHKMGFIHRDIKPDNILIDRD---GHIKLTDFGLCT  149 (376)
T ss_pred             CCCHHHHHHHHHHHHHHH--HHHHHCCeEeCCCCHHHEEECCC---CCEEEEeCCCCc
Confidence            344 46788899999999  99999999999999999999874   789999999874

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.

>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases

Probab=99.53  E-value=1.6e-14  Score=88.52  Aligned_cols=70  Identities=23%  Similarity=0.444  Sum_probs=58.7

Q ss_pred             hcH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCccccccccccccccC
Q psy8010          11 RIP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDVDVREILGTPDYVGE   87 (87)
Q Consensus        11 ~~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~~~~~~~gt~~y~aP   87 (87)
                      .++ +.+..++.|++.++  .++|+++++|+|++|+|++++.+   ..++++|||++......  ....+|++.|+||
T Consensus        97 ~~~~~~~~~~~~qi~~~l--~~lH~~~i~H~dlkp~NIli~~~---~~~kl~Dfg~~~~~~~~--~~~~~gt~~y~aP  167 (291)
T cd05612          97 RFSNSTGLFYASEIVCAL--EYLHSKEIVYRDLKPENILLDKE---GHIKLTDFGFAKKLRDR--TWTLCGTPEYLAP  167 (291)
T ss_pred             CCCHHHHHHHHHHHHHHH--HHHHHCCeeecCCCHHHeEECCC---CCEEEEecCcchhccCC--cccccCChhhcCH
Confidence            344 57788999999999  99999999999999999999874   78999999998765332  2345799999997

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt

>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta

Probab=99.53  E-value=2.4e-14  Score=88.84  Aligned_cols=71  Identities=20%  Similarity=0.382  Sum_probs=59.3

Q ss_pred             cH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecC-CCccccccccccccccC
Q psy8010          12 IP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLS-RDVDVREILGTPDYVGE   87 (87)
Q Consensus        12 ~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~-~~~~~~~~~gt~~y~aP   87 (87)
                      ++ ..+..++.|++.++  .|+|+.+++|+|++|.|++++.+   ..++++|||++.... .........||+.|+||
T Consensus        93 ~~~~~~~~~~~qi~~al--~~LH~~~ivHrdikp~Nil~~~~---~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aP  165 (316)
T cd05619          93 FDLPRATFYAAEIICGL--QFLHSKGIVYRDLKLDNILLDTD---GHIKIADFGMCKENMLGDAKTCTFCGTPDYIAP  165 (316)
T ss_pred             CCHHHHHHHHHHHHHHH--HHHHhCCeEeCCCCHHHEEECCC---CCEEEccCCcceECCCCCCceeeecCCccccCH
Confidence            44 57888999999999  99999999999999999999885   789999999987542 22233456899999998

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in

>PHA03207 serine/threonine kinase US3; Provisional

Probab=99.53  E-value=1.6e-14  Score=91.90  Aligned_cols=72  Identities=19%  Similarity=0.266  Sum_probs=60.2

Q ss_pred             hcH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCcc---cccccccccccc
Q psy8010          11 RIP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDVD---VREILGTPDYVG   86 (87)
Q Consensus        11 ~~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~~---~~~~~gt~~y~a   86 (87)
                      .++ +.+..++.|++.++  .|+|.++++|+|+||.|++++..   ..++++|||+++.+.....   .....||+.|+|
T Consensus       181 ~l~~~~~~~i~~ql~~aL--~~LH~~givHrDlkp~Nill~~~---~~~~l~DfG~a~~~~~~~~~~~~~~~~gt~~y~a  255 (392)
T PHA03207        181 PLPLEQAITIQRRLLEAL--AYLHGRGIIHRDVKTENIFLDEP---ENAVLGDFGAACKLDAHPDTPQCYGWSGTLETNS  255 (392)
T ss_pred             CCCHHHHHHHHHHHHHHH--HHHHHCCccccCCCHHHEEEcCC---CCEEEccCccccccCcccccccccccccccCccC
Confidence            455 57899999999999  99999999999999999999885   7899999999876643222   234689999999


Q ss_pred             C
Q psy8010          87 E   87 (87)
Q Consensus        87 P   87 (87)
                      |
T Consensus       256 P  256 (392)
T PHA03207        256 P  256 (392)
T ss_pred             H
Confidence            8

>KOG0580|consensus

Probab=99.53  E-value=6.2e-15  Score=88.26  Aligned_cols=71  Identities=25%  Similarity=0.396  Sum_probs=61.4

Q ss_pred             hcH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCccccccccccccccC
Q psy8010          11 RIP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDVDVREILGTPDYVGE   87 (87)
Q Consensus        11 ~~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~~~~~~~gt~~y~aP   87 (87)
                      ++. ..+..+..|++.|+  .|||.++++|||+||+|++++..   ..+|++|||.+..-. ...-.+.|||..|.+|
T Consensus       120 ~f~e~~~a~Yi~q~A~Al--~y~h~k~VIhRdiKpenlLlg~~---~~lkiAdfGwsV~~p-~~kR~tlcgt~dyl~p  191 (281)
T KOG0580|consen  120 RFDEQRAATYIKQLANAL--LYCHLKRVIHRDIKPENLLLGSA---GELKIADFGWSVHAP-SNKRKTLCGTLDYLPP  191 (281)
T ss_pred             cccccchhHHHHHHHHHH--HHhccCCcccCCCCHHHhccCCC---CCeeccCCCceeecC-CCCceeeecccccCCH
Confidence            455 37899999999999  99999999999999999999985   789999999876533 4455788999999887

>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N

Probab=99.52  E-value=1.9e-14  Score=89.42  Aligned_cols=72  Identities=18%  Similarity=0.250  Sum_probs=60.2

Q ss_pred             hcH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecC-CCccccccccccccccC
Q psy8010          11 RIP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLS-RDVDVREILGTPDYVGE   87 (87)
Q Consensus        11 ~~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~-~~~~~~~~~gt~~y~aP   87 (87)
                      .++ +.+..++.|++.++  .|+|+.+++|+|++|+|++++.+   ..++++|||++.... ........+|++.||||
T Consensus        97 ~l~~~~~~~~~~qi~~al--~~lH~~~ivHrdlkp~Nill~~~---~~~kL~Dfg~~~~~~~~~~~~~~~~g~~~y~aP  170 (324)
T cd05589          97 VFSEPRAVFYAACVVLGL--QYLHENKIVYRDLKLDNLLLDTE---GFVKIADFGLCKEGMGFGDRTSTFCGTPEFLAP  170 (324)
T ss_pred             CCCHHHHHHHHHHHHHHH--HHHHhCCeEecCCCHHHeEECCC---CcEEeCcccCCccCCCCCCcccccccCccccCH
Confidence            455 47889999999999  99999999999999999999885   789999999887532 22333567899999998

Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved

>PTZ00283 serine/threonine protein kinase; Provisional

Probab=99.52  E-value=2.5e-14  Score=93.66  Aligned_cols=71  Identities=24%  Similarity=0.328  Sum_probs=59.8

Q ss_pred             cH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCC---ccccccccccccccC
Q psy8010          12 IP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRD---VDVREILGTPDYVGE   87 (87)
Q Consensus        12 ~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~---~~~~~~~gt~~y~aP   87 (87)
                      ++ ..+..++.|++.++  .|+|+.+++|+|+||+|++++.+   ..+|++|||+++.+...   ......+||+.|+||
T Consensus       140 l~e~~~~~i~~qll~aL--~~lH~~~IiHrDLKP~NILl~~~---~~vkL~DFGls~~~~~~~~~~~~~~~~Gt~~Y~aP  214 (496)
T PTZ00283        140 FREHEAGLLFIQVLLAV--HHVHSKHMIHRDIKSANILLCSN---GLVKLGDFGFSKMYAATVSDDVGRTFCGTPYYVAP  214 (496)
T ss_pred             CCHHHHHHHHHHHHHHH--HHHHhCCEecCCCCHHHEEEeCC---CCEEEEecccCeeccccccccccccccCCcceeCH
Confidence            44 47888999999999  99999999999999999999885   78999999999875322   223456899999998

>KOG0586|consensus

Probab=99.52  E-value=1.8e-14  Score=94.45  Aligned_cols=69  Identities=14%  Similarity=0.382  Sum_probs=64.5

Q ss_pred             HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCccccccccccccccC
Q psy8010          14 RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDVDVREILGTPDYVGE   87 (87)
Q Consensus        14 ~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~~~~~~~gt~~y~aP   87 (87)
                      ..++.+++|++.++  +|||+++++|+|+|.+|+++..+   -.+||+|||++-.+..+....+.||+|.|.||
T Consensus       155 ~~ar~~F~q~vsav--eYcH~k~ivHrdLk~eNilL~~~---mnikIaDfgfS~~~~~~~~lqt~cgsppyAaP  223 (596)
T KOG0586|consen  155 KEARAKFRQIVSAV--EYCHSKNIVHRDLKAENILLDEN---MNIKIADFGFSTFFDYGLMLQTFCGSPPYAAP  223 (596)
T ss_pred             hhhhhhhHHHHHHH--HHHhhcceeccccchhhcccccc---cceeeeccccceeecccccccccCCCCCccCh
Confidence            57899999999999  99999999999999999999985   66999999999998888888999999999998

>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase

Probab=99.52  E-value=2.6e-14  Score=88.53  Aligned_cols=71  Identities=23%  Similarity=0.306  Sum_probs=59.9

Q ss_pred             cH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCC-ccccccccccccccC
Q psy8010          12 IP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRD-VDVREILGTPDYVGE   87 (87)
Q Consensus        12 ~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~-~~~~~~~gt~~y~aP   87 (87)
                      ++ +.+..++.|++.++  .|+|+++++|+|++|+|++++.+   ..++++|||++...... .......|++.|+||
T Consensus        95 l~~~~~~~~~~qi~~~l--~~lH~~~i~H~dlkp~Nil~~~~---~~~kL~Dfg~~~~~~~~~~~~~~~~g~~~y~aP  167 (318)
T cd05582          95 FTEEDVKFYLAELALAL--DHLHSLGIIYRDLKPENILLDEE---GHIKLTDFGLSKESIDHEKKAYSFCGTVEYMAP  167 (318)
T ss_pred             CCHHHHHHHHHHHHHHH--HHHHHCCEecCCCCHHHeEECCC---CcEEEeeccCCcccCCCCCceecccCChhhcCH
Confidence            44 57899999999999  99999999999999999999875   78999999998765433 233456899999987

Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate

>KOG0201|consensus

Probab=99.51  E-value=1.7e-14  Score=91.92  Aligned_cols=68  Identities=25%  Similarity=0.446  Sum_probs=59.8

Q ss_pred             HHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCccc-cccccccccccC
Q psy8010          15 LVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDVDV-REILGTPDYVGE   87 (87)
Q Consensus        15 ~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~~~-~~~~gt~~y~aP   87 (87)
                      ++..++++++.++  .|+|.++.+|+|+|+.|+++...   +.+|++|||.+-.+...... .+++|||+||||
T Consensus       112 ~i~~ilre~l~~l--~ylH~~~kiHrDIKaanil~s~~---g~vkl~DfgVa~ql~~~~~rr~tfvGTPfwMAP  180 (467)
T KOG0201|consen  112 EIAVILREVLKGL--DYLHSEKKIHRDIKAANILLSES---GDVKLADFGVAGQLTNTVKRRKTFVGTPFWMAP  180 (467)
T ss_pred             eeeeehHHHHHHh--hhhhhcceecccccccceeEecc---CcEEEEecceeeeeechhhccccccccccccch
Confidence            4566789999999  99999999999999999999995   78999999999887554433 789999999998

>KOG0607|consensus

Probab=99.51  E-value=5.2e-14  Score=87.71  Aligned_cols=78  Identities=17%  Similarity=0.353  Sum_probs=63.4

Q ss_pred             HhhhcH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecC--------CCcccccc
Q psy8010           8 LVARIP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLS--------RDVDVREI   78 (87)
Q Consensus         8 ~~~~~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~--------~~~~~~~~   78 (87)
                      ....|. +++..+...+..+|  .|+|.+||-|||+||+||+-...+....+|++||-++..+.        ......++
T Consensus       169 ~~~~F~E~EAs~vvkdia~aL--dFlH~kgIAHRDlKPENiLC~~pn~vsPvKiCDfDLgSg~k~~~~~spastP~L~tP  246 (463)
T KOG0607|consen  169 KRKHFNEREASRVVKDIASAL--DFLHTKGIAHRDLKPENILCESPNKVSPVKICDFDLGSGIKLNNDCSPASTPELLTP  246 (463)
T ss_pred             HhhhccHHHHHHHHHHHHHHH--HHHhhcCcccccCCccceeecCCCCcCceeeeccccccccccCCCCCCCCCccccCc
Confidence            344556 47999999999999  99999999999999999999887767789999997765431        12234678


Q ss_pred             ccccccccC
Q psy8010          79 LGTPDYVGE   87 (87)
Q Consensus        79 ~gt~~y~aP   87 (87)
                      +|+..||||
T Consensus       247 vGSAEfMAP  255 (463)
T KOG0607|consen  247 VGSAEFMAP  255 (463)
T ss_pred             ccchhhcch
Confidence            999999998

>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3

Probab=99.51  E-value=5.3e-14  Score=87.67  Aligned_cols=69  Identities=17%  Similarity=0.316  Sum_probs=55.9

Q ss_pred             HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCccc---cccccccccccC
Q psy8010          14 RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDVDV---REILGTPDYVGE   87 (87)
Q Consensus        14 ~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~~~---~~~~gt~~y~aP   87 (87)
                      +.+..++.|++.|+  .|+|+.+++|+|+||.|++++.+   ..++++|||+++.+......   ....+++.|+||
T Consensus       174 ~~~~~~~~qi~~aL--~~LH~~~ivHrDiKp~Nil~~~~---~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~~y~aP  245 (338)
T cd05102         174 EDLICYSFQVARGM--EFLASRKCIHRDLAARNILLSEN---NVVKICDFGLARDIYKDPDYVRKGSARLPLKWMAP  245 (338)
T ss_pred             HHHHHHHHHHHHHH--HHHHHCCEECCCCccceEEEcCC---CcEEEeecccccccccCcchhcccCCCCCccccCc
Confidence            46788999999999  99999999999999999999874   78999999999865332211   233456779987

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V

>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5

Probab=99.51  E-value=4.4e-14  Score=86.06  Aligned_cols=72  Identities=26%  Similarity=0.484  Sum_probs=60.0

Q ss_pred             hcH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCc--cccccccccccccC
Q psy8010          11 RIP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDV--DVREILGTPDYVGE   87 (87)
Q Consensus        11 ~~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~--~~~~~~gt~~y~aP   87 (87)
                      .++ +.+..++.|++.++  .|+|+.+++|+|++|+|++++.+   ..++++|||++.......  ......|++.|+||
T Consensus        96 ~~~~~~~~~~~~qi~~~L--~~lH~~~i~H~dlkp~Nill~~~---~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~y~aP  170 (287)
T cd07848          96 GVPPEKVRSYIYQLIKAI--HWCHKNDIVHRDIKPENLLISHN---DVLKLCDFGFARNLSEGSNANYTEYVATRWYRSP  170 (287)
T ss_pred             CCCHHHHHHHHHHHHHHH--HHHHHCCeecCCCCHHHEEEcCC---CcEEEeeccCcccccccccccccccccccccCCc
Confidence            355 57888999999999  99999999999999999999874   789999999988764322  22456789999998

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes

>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase

Probab=99.50  E-value=4e-14  Score=87.32  Aligned_cols=71  Identities=23%  Similarity=0.294  Sum_probs=58.4

Q ss_pred             cH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCc-cccccccccccccC
Q psy8010          12 IP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDV-DVREILGTPDYVGE   87 (87)
Q Consensus        12 ~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~-~~~~~~gt~~y~aP   87 (87)
                      ++ +.+..++.|++.++  .|+|+.+++|+|++|+|++++.+   ..++++|||++....... ......+++.|+||
T Consensus       101 ~~~~~~~~~~~qi~~aL--~~lH~~~ivH~dlkp~Nill~~~---~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aP  173 (309)
T cd07872         101 MSMHNVKIFLYQILRGL--AYCHRRKVLHRDLKPQNLLINER---GELKLADFGLARAKSVPTKTYSNEVVTLWYRPP  173 (309)
T ss_pred             CCHHHHHHHHHHHHHHH--HHHHHCCeecCCCCHHHEEECCC---CCEEECccccceecCCCccccccccccccccCC
Confidence            44 57888999999999  99999999999999999999875   789999999987653222 23345778889987

Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play

>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6

Probab=99.50  E-value=5.3e-14  Score=86.74  Aligned_cols=72  Identities=21%  Similarity=0.375  Sum_probs=58.1

Q ss_pred             HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeC-CCCCcEEEEeeccceecCCCc----cccccccccccccC
Q psy8010          14 RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGE-YPDCDVKLCDFGISRHLSRDV----DVREILGTPDYVGE   87 (87)
Q Consensus        14 ~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~-~~~~~~kl~dfg~~~~~~~~~----~~~~~~gt~~y~aP   87 (87)
                      +.+..++.|++.|+  .|+|+.+++|+|++|+|+++... ..+..++++|||+++.+....    ......||+.|+||
T Consensus       108 ~~~~~i~~qi~~aL--~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~t~~y~aP  184 (317)
T cd07867         108 SMVKSLLYQILDGI--HYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPLADLDPVVVTFWYRAP  184 (317)
T ss_pred             HHHHHHHHHHHHHH--HHHHhCCEEcCCCCHHHEEEccCCCCCCcEEEeeccceeccCCCcccccccCcceecccccCc
Confidence            46788999999999  99999999999999999998543 124679999999998764322    22456889999998

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as

>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1

Probab=99.50  E-value=5.3e-14  Score=85.80  Aligned_cols=71  Identities=18%  Similarity=0.401  Sum_probs=59.5

Q ss_pred             cH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCcc-ccccccccccccC
Q psy8010          12 IP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDVD-VREILGTPDYVGE   87 (87)
Q Consensus        12 ~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~~-~~~~~gt~~y~aP   87 (87)
                      ++ +.+..++.|++.++  .|+|+.+++|+|++|.|++++.+   ..++++|||++..+..... .....||+.|+||
T Consensus        94 l~~~~~~~~~~qi~~~l--~~lH~~~i~H~dlkp~Nili~~~---~~~~l~dfg~~~~~~~~~~~~~~~~g~~~y~aP  166 (280)
T cd05608          94 FPEPRACFYTAQIISGL--EHLHQRRIIYRDLKPENVLLDND---GNVRISDLGLAVELKDGQSKTKGYAGTPGFMAP  166 (280)
T ss_pred             CCHHHHHHHHHHHHHHH--HHHHHCCcccCCCCHHHEEECCC---CCEEEeeCccceecCCCCccccccCCCcCccCH
Confidence            44 47888999999999  99999999999999999999874   7899999999887644332 2446889999987

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g

>KOG0197|consensus

Probab=99.50  E-value=2.6e-14  Score=92.22  Aligned_cols=66  Identities=14%  Similarity=0.303  Sum_probs=54.4

Q ss_pred             hHHHHHh-hhcH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCc
Q psy8010           3 NFIITLV-ARIP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDV   73 (87)
Q Consensus         3 ~~~~~~~-~~~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~   73 (87)
                      +|+++-. ..+. .+...++.||+.||  .|+.++++||||+...|+|++.+   ..+||+|||+|+.+.++.
T Consensus       290 ~yLr~~~~~~l~~~~Ll~~a~qIaeGM--~YLes~~~IHRDLAARNiLV~~~---~~vKIsDFGLAr~~~d~~  357 (468)
T KOG0197|consen  290 DYLRTREGGLLNLPQLLDFAAQIAEGM--AYLESKNYIHRDLAARNILVDED---LVVKISDFGLARLIGDDE  357 (468)
T ss_pred             HHhhhcCCCccchHHHHHHHHHHHHHH--HHHHhCCccchhhhhhheeeccC---ceEEEcccccccccCCCc
Confidence            4566522 2344 57899999999999  99999999999999999999995   789999999999544443

>PLN00034 mitogen-activated protein kinase kinase; Provisional

Probab=99.50  E-value=5e-14  Score=88.47  Aligned_cols=69  Identities=25%  Similarity=0.495  Sum_probs=58.1

Q ss_pred             HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCc-cccccccccccccC
Q psy8010          14 RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDV-DVREILGTPDYVGE   87 (87)
Q Consensus        14 ~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~-~~~~~~gt~~y~aP   87 (87)
                      ..+..++.|++.++  .|+|+++++|+|+++.|++++.+   ..++++|||++..+.... ......||+.|+||
T Consensus       168 ~~~~~i~~qi~~aL--~~LH~~~ivHrDlkp~NIll~~~---~~~kL~DfG~~~~~~~~~~~~~~~~gt~~y~aP  237 (353)
T PLN00034        168 QFLADVARQILSGI--AYLHRRHIVHRDIKPSNLLINSA---KNVKIADFGVSRILAQTMDPCNSSVGTIAYMSP  237 (353)
T ss_pred             HHHHHHHHHHHHHH--HHHHHCCEeecCCCHHHEEEcCC---CCEEEcccccceecccccccccccccCccccCc
Confidence            35778999999999  99999999999999999999875   789999999998764322 22456899999987

>KOG4250|consensus

Probab=99.49  E-value=6.2e-14  Score=93.40  Aligned_cols=71  Identities=23%  Similarity=0.324  Sum_probs=62.7

Q ss_pred             HHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCC-CCCcEEEEeeccceecCCCccccccccccccccC
Q psy8010          15 LVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEY-PDCDVKLCDFGISRHLSRDVDVREILGTPDYVGE   87 (87)
Q Consensus        15 ~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~-~~~~~kl~dfg~~~~~~~~~~~~~~~gt~~y~aP   87 (87)
                      +...+...++.|+  .|+|.+||+|||+||.||+.-... +..--|++|||.|+.+.++......+||+.|.+|
T Consensus       121 e~l~lL~d~~~al--~~LrEn~IvHRDlKP~NIvl~~Gedgq~IyKLtDfG~Arel~d~s~~~S~vGT~~YLhP  192 (732)
T KOG4250|consen  121 EFLDLLSDLVSAL--RHLRENGIVHRDLKPGNIVLQIGEDGQSIYKLTDFGAARELDDNSLFTSLVGTEEYLHP  192 (732)
T ss_pred             HHHHHHHHHHHHH--HHHHHcCceeccCCCCcEEEeecCCCceEEeeecccccccCCCCCeeeeecCchhhcCh
Confidence            6788889999999  999999999999999999987643 2334799999999999888888899999999988

>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7

Probab=99.49  E-value=8.9e-14  Score=84.71  Aligned_cols=69  Identities=16%  Similarity=0.313  Sum_probs=58.9

Q ss_pred             HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCccccccccccccccC
Q psy8010          14 RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDVDVREILGTPDYVGE   87 (87)
Q Consensus        14 ~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~~~~~~~gt~~y~aP   87 (87)
                      +.+..++.|++.++  .++|+.+++|+|++|+|++++.+   ..++++|||++.............|++.|+||
T Consensus        95 ~~~~~~~~qi~~al--~~lH~~~ivH~dikp~Nili~~~---~~~~l~Dfg~~~~~~~~~~~~~~~~~~~y~aP  163 (277)
T cd05607          95 ERVIHYSAQITCGI--LHLHSMDIVYRDMKPENVLLDDQ---GNCRLSDLGLAVELKDGKTITQRAGTNGYMAP  163 (277)
T ss_pred             HHHHHHHHHHHHHH--HHHHHCCEEEccCChHhEEEcCC---CCEEEeeceeeeecCCCceeeccCCCCCccCH
Confidence            46778899999999  99999999999999999999885   78999999998876554444456788999987

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr

>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor

Probab=99.49  E-value=6.9e-14  Score=86.53  Aligned_cols=78  Identities=14%  Similarity=0.186  Sum_probs=58.6

Q ss_pred             HHHHhhhcH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCcccc---cccc
Q psy8010           5 IITLVARIP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDVDVR---EILG   80 (87)
Q Consensus         5 ~~~~~~~~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~~~~---~~~g   80 (87)
                      ++.....++ ..+..++.|++.++  .|+|+++++|+|++|.|++++.+   ..++++|||+++.+.......   ...+
T Consensus        99 l~~~~~~~~~~~~~~~~~qi~~~L--~~LH~~~iiH~dlkp~Nill~~~---~~~kl~DfG~a~~~~~~~~~~~~~~~~~  173 (316)
T cd05108          99 VREHKDNIGSQYLLNWCVQIAKGM--NYLEERRLVHRDLAARNVLVKTP---QHVKITDFGLAKLLGADEKEYHAEGGKV  173 (316)
T ss_pred             HHhccccCCHHHHHHHHHHHHHHH--HHHHhcCeeccccchhheEecCC---CcEEEccccccccccCCCcceeccCCcc
Confidence            333333444 46788899999999  99999999999999999999875   789999999998764333221   2233


Q ss_pred             ccccccC
Q psy8010          81 TPDYVGE   87 (87)
Q Consensus        81 t~~y~aP   87 (87)
                      +..|+||
T Consensus       174 ~~~y~ap  180 (316)
T cd05108         174 PIKWMAL  180 (316)
T ss_pred             ceeecCh
Confidence            5568876

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor

>KOG0584|consensus

Probab=99.49  E-value=4.6e-14  Score=92.90  Aligned_cols=69  Identities=17%  Similarity=0.422  Sum_probs=60.3

Q ss_pred             HHHHHHHHHHHHHHHHHHhhhCC--ceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCccccccccccccccC
Q psy8010          14 RLVAKVTVTLLGSLNHHFTSTHS--LYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDVDVREILGTPDYVGE   87 (87)
Q Consensus        14 ~~~~~~~~q~~~~l~~~~~h~~~--~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~~~~~~~gt~~y~aP   87 (87)
                      +.++.+++|++.||  .|+|++.  |+|||+|=.||+++.+  .+.+||.|+|+|..... .......|||.||||
T Consensus       143 kaik~W~RQILkGL--~yLHs~~PPIIHRDLKCDNIFinG~--~G~VKIGDLGLAtl~r~-s~aksvIGTPEFMAP  213 (632)
T KOG0584|consen  143 KAIKSWCRQILKGL--VYLHSQDPPIIHRDLKCDNIFVNGN--LGEVKIGDLGLATLLRK-SHAKSVIGTPEFMAP  213 (632)
T ss_pred             HHHHHHHHHHHHHh--hhhhcCCCCccccccccceEEEcCC--cCceeecchhHHHHhhc-cccceeccCccccCh
Confidence            57899999999999  9999985  9999999999999988  68999999999986543 233457999999998

>KOG0668|consensus

Probab=99.49  E-value=7.2e-14  Score=83.89  Aligned_cols=69  Identities=14%  Similarity=0.279  Sum_probs=59.4

Q ss_pred             HHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCccccccccccccccC
Q psy8010          15 LVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDVDVREILGTPDYVGE   87 (87)
Q Consensus        15 ~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~~~~~~~gt~~y~aP   87 (87)
                      .++.++.|++.|+  .|||+.|+.|||.||.|++++..  ...++++|+|+|..+.++......+.+.+|-.|
T Consensus       133 dIryY~~elLkAL--dyCHS~GImHRDVKPhNvmIdh~--~rkLrlIDWGLAEFYHp~~eYnVRVASRyfKGP  201 (338)
T KOG0668|consen  133 DIRYYIYELLKAL--DYCHSMGIMHRDVKPHNVMIDHE--LRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGP  201 (338)
T ss_pred             hHHHHHHHHHHHH--hHHHhcCcccccCCcceeeechh--hceeeeeecchHhhcCCCceeeeeeehhhcCCc
Confidence            6899999999999  99999999999999999999987  578999999999988777766666666665443

>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2

Probab=99.49  E-value=7.8e-14  Score=84.75  Aligned_cols=78  Identities=17%  Similarity=0.181  Sum_probs=59.0

Q ss_pred             HHHHhhhcH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCccc---ccccc
Q psy8010           5 IITLVARIP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDVDV---REILG   80 (87)
Q Consensus         5 ~~~~~~~~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~~~---~~~~g   80 (87)
                      ++...+.++ +.+..++.|++.++  .|+|+.+++|+|++|+|+++..+   ..++++|||+++.+......   ....+
T Consensus        99 l~~~~~~~~~~~~~~~~~qi~~~L--~~lH~~~iiH~dlkp~Nil~~~~---~~~kL~dfG~~~~~~~~~~~~~~~~~~~  173 (279)
T cd05109          99 VRENKDRIGSQDLLNWCVQIAKGM--SYLEEVRLVHRDLAARNVLVKSP---NHVKITDFGLARLLDIDETEYHADGGKV  173 (279)
T ss_pred             HhhccCCCCHHHHHHHHHHHHHHH--HHHHHCCeeccccccceEEEcCC---CcEEECCCCceeecccccceeecCCCcc
Confidence            333334455 57888999999999  99999999999999999999874   67999999999876433222   12234


Q ss_pred             ccccccC
Q psy8010          81 TPDYVGE   87 (87)
Q Consensus        81 t~~y~aP   87 (87)
                      ++.|+||
T Consensus       174 ~~~y~~P  180 (279)
T cd05109         174 PIKWMAL  180 (279)
T ss_pred             chhhCCH
Confidence            5668876

Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve

>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5

Probab=99.48  E-value=8.4e-14  Score=85.11  Aligned_cols=72  Identities=15%  Similarity=0.265  Sum_probs=60.7

Q ss_pred             hcH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCccccccccccccccC
Q psy8010          11 RIP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDVDVREILGTPDYVGE   87 (87)
Q Consensus        11 ~~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~~~~~~~gt~~y~aP   87 (87)
                      .++ +.+..++.|++.++  .|+|+.+++|+|++|.|++++..   ..++++|||++.............|++.|+||
T Consensus        98 ~~~~~~~~~~~~ql~~~l--~~lH~~~iiH~dikp~Nili~~~---~~~kl~Dfg~~~~~~~~~~~~~~~g~~~~~aP  170 (285)
T cd05632          98 GFEEERALFYAAEILCGL--EDLHRENTVYRDLKPENILLDDY---GHIRISDLGLAVKIPEGESIRGRVGTVGYMAP  170 (285)
T ss_pred             CCCHHHHHHHHHHHHHHH--HHHHhCCeeecCCCHHHEEECCC---CCEEEecCCcceecCCCCcccCCCCCcCccCh
Confidence            355 57899999999999  99999999999999999999874   68999999998776444444556889999987

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with

>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C

Probab=99.48  E-value=7.4e-14  Score=86.65  Aligned_cols=72  Identities=22%  Similarity=0.371  Sum_probs=59.8

Q ss_pred             hcH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecC-CCccccccccccccccC
Q psy8010          11 RIP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLS-RDVDVREILGTPDYVGE   87 (87)
Q Consensus        11 ~~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~-~~~~~~~~~gt~~y~aP   87 (87)
                      +++ +.+..++.|++.++  .|+|+.+++|+|++|+|++++.+   ..++++|||+++... ........+|++.|+||
T Consensus        92 ~l~~~~~~~~~~qi~~~l--~~LH~~~ivH~dlkp~Nill~~~---~~~kl~Dfg~~~~~~~~~~~~~~~~g~~~y~aP  165 (318)
T cd05570          92 RFDEPRARFYAAEIVLGL--QFLHERGIIYRDLKLDNVLLDSE---GHIKIADFGMCKEGILGGVTTSTFCGTPDYIAP  165 (318)
T ss_pred             CCCHHHHHHHHHHHHHHH--HHHHhCCeEccCCCHHHeEECCC---CcEEecccCCCeecCcCCCcccceecCccccCH
Confidence            455 57888999999999  99999999999999999999885   789999999987532 22233456899999997

Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re

>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase

Probab=99.48  E-value=8e-14  Score=88.07  Aligned_cols=71  Identities=23%  Similarity=0.432  Sum_probs=58.9

Q ss_pred             cH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCc--cccccccccccccC
Q psy8010          12 IP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDV--DVREILGTPDYVGE   87 (87)
Q Consensus        12 ~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~--~~~~~~gt~~y~aP   87 (87)
                      ++ +.+..++.|++.++  .|+|+++++|+|++|+|++++.+   ..++++|||++.......  ......+++.|+||
T Consensus       100 l~~~~~~~~~~qi~~aL--~~LH~~~ivH~dlkp~Nili~~~---~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~y~aP  173 (372)
T cd07853         100 LSSDHVKVFLYQILRGL--KYLHSAGILHRDIKPGNLLVNSN---CVLKICDFGLARVEEPDESKHMTQEVVTQYYRAP  173 (372)
T ss_pred             CCHHHHHHHHHHHHHHH--HHHHhCCeeCCCCChHHEEECCC---CCEEeccccceeecccCccccCCCCCcCCCcCCH
Confidence            44 57889999999999  99999999999999999999885   789999999988653222  22445788899987

Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription

>PTZ00284 protein kinase; Provisional

Probab=99.47  E-value=1e-13  Score=89.99  Aligned_cols=73  Identities=21%  Similarity=0.345  Sum_probs=57.6

Q ss_pred             hcH-HHHHHHHHHHHHHHHHHHhhh-CCceecCCCCCceEeeeCCC-------------CCcEEEEeeccceecCCCccc
Q psy8010          11 RIP-RLVAKVTVTLLGSLNHHFTST-HSLYRSCSQPQNLVLTGEYP-------------DCDVKLCDFGISRHLSRDVDV   75 (87)
Q Consensus        11 ~~~-~~~~~~~~q~~~~l~~~~~h~-~~~~h~~~~~~~~l~~~~~~-------------~~~~kl~dfg~~~~~~~~~~~   75 (87)
                      .++ ..+..++.|++.++  .|+|+ .+++|+|+||+||++...+.             ...+|++|||.+...  ....
T Consensus       227 ~l~~~~~~~i~~qi~~aL--~yLH~~~gIiHrDlKP~NILl~~~~~~~~~~~~~~~~~~~~~vkl~DfG~~~~~--~~~~  302 (467)
T PTZ00284        227 PFSHRHLAQIIFQTGVAL--DYFHTELHLMHTDLKPENILMETSDTVVDPVTNRALPPDPCRVRICDLGGCCDE--RHSR  302 (467)
T ss_pred             CCCHHHHHHHHHHHHHHH--HHHHhcCCeecCCCCHHHEEEecCCcccccccccccCCCCceEEECCCCccccC--cccc
Confidence            345 57889999999999  99998 59999999999999986521             125999999987542  2223


Q ss_pred             cccccccccccC
Q psy8010          76 REILGTPDYVGE   87 (87)
Q Consensus        76 ~~~~gt~~y~aP   87 (87)
                      ...+||+.||||
T Consensus       303 ~~~~gt~~Y~AP  314 (467)
T PTZ00284        303 TAIVSTRHYRSP  314 (467)
T ss_pred             ccccCCccccCc
Confidence            456899999998

>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases

Probab=99.47  E-value=1.4e-13  Score=84.15  Aligned_cols=72  Identities=14%  Similarity=0.256  Sum_probs=60.8

Q ss_pred             hcH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCccccccccccccccC
Q psy8010          11 RIP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDVDVREILGTPDYVGE   87 (87)
Q Consensus        11 ~~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~~~~~~~gt~~y~aP   87 (87)
                      .++ +.+..++.|++.++  .|+|+.+++|+|++|.|++++..   ..++++|||++............+|++.|+||
T Consensus        98 ~~~~~~~~~~~~qi~~~l--~~lH~~~ivH~dlkp~Nil~~~~---~~~~l~Dfg~~~~~~~~~~~~~~~~~~~y~aP  170 (285)
T cd05605          98 GFDEERAVFYAAEITCGL--EDLHRERIVYRDLKPENILLDDY---GHIRISDLGLAVEIPEGETIRGRVGTVGYMAP  170 (285)
T ss_pred             CCCHHHHHHHHHHHHHHH--HHHHHCCcEecCCCHHHEEECCC---CCEEEeeCCCceecCCCCccccccCCCCccCc
Confidence            355 57888999999999  99999999999999999999874   78999999998876544444455889999987

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,

>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6

Probab=99.47  E-value=1.5e-13  Score=84.11  Aligned_cols=71  Identities=14%  Similarity=0.287  Sum_probs=60.1

Q ss_pred             cH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCccccccccccccccC
Q psy8010          12 IP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDVDVREILGTPDYVGE   87 (87)
Q Consensus        12 ~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~~~~~~~gt~~y~aP   87 (87)
                      ++ +.+..++.|++.++  .|+|+.+++|+|++|.|++++..   ..++++|||++.............|++.|+||
T Consensus        99 l~~~~~~~~~~qi~~~l--~~lH~~~iiH~dikp~Nil~~~~---~~~~l~Dfg~~~~~~~~~~~~~~~g~~~y~aP  170 (285)
T cd05630          99 FEEGRAVFYAAEICCGL--EDLHQERIVYRDLKPENILLDDH---GHIRISDLGLAVHVPEGQTIKGRVGTVGYMAP  170 (285)
T ss_pred             CCHHHHHHHHHHHHHHH--HHHHhCCEEeCCCCHHHEEECCC---CCEEEeeccceeecCCCccccCCCCCccccCh
Confidence            55 47888999999999  99999999999999999999875   77999999998766544444455889999987

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as

>KOG0984|consensus

Probab=99.46  E-value=7.7e-14  Score=82.56  Aligned_cols=72  Identities=28%  Similarity=0.520  Sum_probs=59.3

Q ss_pred             hcHH-HHHHHHHHHHHHHHHHHhhh-CCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCccccccccccccccC
Q psy8010          11 RIPR-LVAKVTVTLLGSLNHHFTST-HSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDVDVREILGTPDYVGE   87 (87)
Q Consensus        11 ~~~~-~~~~~~~q~~~~l~~~~~h~-~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~~~~~~~gt~~y~aP   87 (87)
                      .+|| ..-+++.-++.|+  .|+|+ ..++|||+||.|++++.+   +.+|++|||++..+.++...+.-.|...||||
T Consensus       144 ~ipE~vlGkIa~Svv~al--~~L~~kL~vIHRDvKPsNiLIn~~---GqVKiCDFGIsG~L~dSiAkt~daGCkpYmaP  217 (282)
T KOG0984|consen  144 TIPEDVLGKIAVSVVHAL--EFLHSKLSVIHRDVKPSNILINYD---GQVKICDFGISGYLVDSIAKTMDAGCKPYMAP  217 (282)
T ss_pred             cCchHHhhHhHHHHHHHH--HHHHHHhhhhhccCCcceEEEccC---CcEEEcccccceeehhhhHHHHhcCCCccCCh
Confidence            3554 4567788889999  99997 579999999999999996   89999999999887665544546888899998

>KOG0608|consensus

Probab=99.46  E-value=1.8e-13  Score=91.34  Aligned_cols=53  Identities=17%  Similarity=0.284  Sum_probs=48.3

Q ss_pred             hcH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeecccee
Q psy8010          11 RIP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRH   68 (87)
Q Consensus        11 ~~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~   68 (87)
                      -|+ +.++.++.++.+++  ++.|..|++|||+||.|||++.+   +++|+.|||++-.
T Consensus       725 IFeE~LARFYIAEltcAi--esVHkmGFIHRDiKPDNILIDrd---GHIKLTDFGLCTG  778 (1034)
T KOG0608|consen  725 IFEEDLARFYIAELTCAI--ESVHKMGFIHRDIKPDNILIDRD---GHIKLTDFGLCTG  778 (1034)
T ss_pred             cCHHHHHHHHHHHHHHHH--HHHHhccceecccCccceEEccC---Cceeeeecccccc
Confidence            355 47999999999999  99999999999999999999996   8999999998764

>KOG1035|consensus

Probab=99.46  E-value=9.3e-14  Score=96.78  Aligned_cols=69  Identities=26%  Similarity=0.425  Sum_probs=58.7

Q ss_pred             HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceec-------------------CCCcc
Q psy8010          14 RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHL-------------------SRDVD   74 (87)
Q Consensus        14 ~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~-------------------~~~~~   74 (87)
                      .++..+++|++.|+  .|+|.+|++|||+||.||+++.+   ..||+.|||+|...                   .++..
T Consensus       697 d~~wrLFreIlEGL--aYIH~~giIHRDLKP~NIFLd~~---~~VKIGDFGLAt~~~~~~~~~d~~~~~~~~~~g~~~~~  771 (1351)
T KOG1035|consen  697 DEAWRLFREILEGL--AYIHDQGIIHRDLKPRNIFLDSR---NSVKIGDFGLATDLKENLESIDQDLSFSTNRAGSNDGD  771 (1351)
T ss_pred             HHHHHHHHHHHHHH--HHHHhCceeeccCCcceeEEcCC---CCeeecccccchhhhhhhhhHhhccCccccccCCCCcc
Confidence            57899999999999  99999999999999999999975   78999999998861                   01113


Q ss_pred             ccccccccccccC
Q psy8010          75 VREILGTPDYVGE   87 (87)
Q Consensus        75 ~~~~~gt~~y~aP   87 (87)
                      .+..+||..|+||
T Consensus       772 ~Ts~VGTalYvAP  784 (1351)
T KOG1035|consen  772 LTSQVGTALYVAP  784 (1351)
T ss_pred             cccccceeeeecH
Confidence            3567999999998

>KOG4721|consensus

Probab=99.46  E-value=3.2e-14  Score=93.92  Aligned_cols=70  Identities=21%  Similarity=0.393  Sum_probs=63.1

Q ss_pred             HHHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCccccccccccccccC
Q psy8010          13 PRLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDVDVREILGTPDYVGE   87 (87)
Q Consensus        13 ~~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~~~~~~~gt~~y~aP   87 (87)
                      ++....+..+++.++  .|+|.+.|+|||+|..||+++.+   .-+||+|||.++.+.+..+.-.++||..||||
T Consensus       211 p~llv~Wsk~IA~GM--~YLH~hKIIHRDLKSPNiLIs~~---d~VKIsDFGTS~e~~~~STkMSFaGTVaWMAP  280 (904)
T KOG4721|consen  211 PSLLVDWSKGIAGGM--NYLHLHKIIHRDLKSPNILISYD---DVVKISDFGTSKELSDKSTKMSFAGTVAWMAP  280 (904)
T ss_pred             HHHHHHHHHHhhhhh--HHHHHhhHhhhccCCCceEeecc---ceEEeccccchHhhhhhhhhhhhhhhHhhhCH
Confidence            367889999999999  99999999999999999999985   67999999999988776566678999999998

>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3

Probab=99.46  E-value=2.5e-13  Score=82.76  Aligned_cols=79  Identities=14%  Similarity=0.223  Sum_probs=60.2

Q ss_pred             HHHHHhhhcH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCcc---ccccc
Q psy8010           4 FIITLVARIP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDVD---VREIL   79 (87)
Q Consensus         4 ~~~~~~~~~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~~---~~~~~   79 (87)
                      ++....+.++ +.+..++.|++.++  .|+|+.+++|+|++|.|++++.+   ..++++|||+++.......   .....
T Consensus        98 ~l~~~~~~~~~~~~~~i~~qi~~~l--~~lH~~~iiH~dlkp~nili~~~---~~~kl~Dfg~~~~~~~~~~~~~~~~~~  172 (279)
T cd05111          98 HVRQHRDSLDPQRLLNWCVQIAKGM--YYLEEHRMVHRNLAARNILLKSD---SIVQIADFGVADLLYPDDKKYFYSEHK  172 (279)
T ss_pred             HHHhcccCCCHHHHHHHHHHHHHHH--HHHHHCCEeccccCcceEEEcCC---CcEEEcCCccceeccCCCcccccCCCC
Confidence            3333334455 47888999999999  99999999999999999999874   7899999999987643322   12345


Q ss_pred             cccccccC
Q psy8010          80 GTPDYVGE   87 (87)
Q Consensus        80 gt~~y~aP   87 (87)
                      ++..|++|
T Consensus       173 ~~~~y~~p  180 (279)
T cd05111         173 TPIKWMAL  180 (279)
T ss_pred             CcccccCH
Confidence            56678876

Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r

>KOG0666|consensus

Probab=99.45  E-value=1.1e-13  Score=85.98  Aligned_cols=74  Identities=19%  Similarity=0.401  Sum_probs=60.9

Q ss_pred             cH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCC-CCCcEEEEeeccceecCCCc----cccccccccccc
Q psy8010          12 IP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEY-PDCDVKLCDFGISRHLSRDV----DVREILGTPDYV   85 (87)
Q Consensus        12 ~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~-~~~~~kl~dfg~~~~~~~~~----~~~~~~gt~~y~   85 (87)
                      ++ ..++.+++|++.++  .|+|+.=++|||+||.||++..++ +.+.+|+.|+|+++.+.+.-    +....+-|.||+
T Consensus       129 lp~~mvKsilwQil~Gv--~YLH~NWvlHRDLKPaNIlvmgdgperG~VKIaDlGlaR~~~~plkpl~s~d~VVVTiWYR  206 (438)
T KOG0666|consen  129 LPRSMVKSILWQILDGV--HYLHSNWVLHRDLKPANILVMGDGPERGRVKIADLGLARLFNNPLKPLASLDPVVVTIWYR  206 (438)
T ss_pred             CCHHHHHHHHHHHHhhh--HHHhhhheeeccCCcceEEEeccCCccCeeEeecccHHHHhhccccccccCCceEEEEEec
Confidence            44 47999999999999  999999999999999999998764 24679999999999874332    223457789999


Q ss_pred             cC
Q psy8010          86 GE   87 (87)
Q Consensus        86 aP   87 (87)
                      ||
T Consensus       207 AP  208 (438)
T KOG0666|consen  207 AP  208 (438)
T ss_pred             Ch
Confidence            98

>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1

Probab=99.44  E-value=2e-13  Score=83.99  Aligned_cols=69  Identities=14%  Similarity=0.223  Sum_probs=55.8

Q ss_pred             HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCcc---ccccccccccccC
Q psy8010          14 RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDVD---VREILGTPDYVGE   87 (87)
Q Consensus        14 ~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~~---~~~~~gt~~y~aP   87 (87)
                      ..+..++.|++.|+  .|+|+.+++|+|++|.|++++.+   ..++++|||++..+.....   .....+++.|+||
T Consensus       138 ~~~~~i~~~i~~al--~~lH~~~ivH~dlkp~Nill~~~---~~~kl~DfG~~~~~~~~~~~~~~~~~~~~~~y~aP  209 (304)
T cd05096         138 SSLLHVALQIASGM--KYLSSLNFVHRDLATRNCLVGEN---LTIKIADFGMSRNLYAGDYYRIQGRAVLPIRWMAW  209 (304)
T ss_pred             HHHHHHHHHHHHHH--HHHHHCCccccCcchhheEEcCC---ccEEECCCccceecccCceeEecCcCCCCccccCH
Confidence            35778999999999  99999999999999999999974   7899999999886543321   1233556778887

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k

>KOG4645|consensus

Probab=99.44  E-value=1.6e-13  Score=96.23  Aligned_cols=67  Identities=24%  Similarity=0.416  Sum_probs=59.0

Q ss_pred             HHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCC-----ccccccccccccccC
Q psy8010          16 VAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRD-----VDVREILGTPDYVGE   87 (87)
Q Consensus        16 ~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~-----~~~~~~~gt~~y~aP   87 (87)
                      .+-+..|++.++  .++|.+||+|||+||.||++..+   +-+|..|||.|..+...     .......|||-||||
T Consensus      1336 t~vyt~qll~gl--a~LH~~gIVHRDIK~aNI~Ld~~---g~iK~~DFGsa~ki~~~~~~~~~el~~~~GT~~YMAP 1407 (1509)
T KOG4645|consen 1336 TRVYTKQLLEGL--AYLHEHGIVHRDIKPANILLDFN---GLIKYGDFGSAVKIKNNAQTMPGELQSMMGTPMYMAP 1407 (1509)
T ss_pred             HHHHHHHHHHHH--HHHHhcCceecCCCccceeeecC---CcEEeecccceeEecCchhcCCHHHHhhcCCchhcCc
Confidence            567789999999  99999999999999999999985   78999999999987443     244678999999998

>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity

Probab=99.44  E-value=2.7e-13  Score=81.22  Aligned_cols=73  Identities=25%  Similarity=0.503  Sum_probs=60.9

Q ss_pred             hhcH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceec-CCCccccccccccccccC
Q psy8010          10 ARIP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHL-SRDVDVREILGTPDYVGE   87 (87)
Q Consensus        10 ~~~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~-~~~~~~~~~~gt~~y~aP   87 (87)
                      ..++ ..+..++.|++.++  .++|+.+++|+|++|.|+++..+   ..++++|||.+... ..........+++.|+||
T Consensus        93 ~~~~~~~~~~~~~qi~~~L--~~Lh~~~i~H~dikp~NIl~~~~---~~~~l~Dfg~~~~~~~~~~~~~~~~~~~~y~aP  167 (260)
T PF00069_consen   93 KPLSEEEILKIAYQILEAL--AYLHSKGIVHRDIKPENILLDEN---GEVKLIDFGSSVKLSENNENFNPFVGTPEYMAP  167 (260)
T ss_dssp             SSBBHHHHHHHHHHHHHHH--HHHHHTTEEESSBSGGGEEESTT---SEEEESSGTTTEESTSTTSEBSSSSSSGGGSCH
T ss_pred             ccccccccccccccccccc--ccccccccccccccccccccccc---ccccccccccccccccccccccccccccccccc
Confidence            3444 57899999999999  99999999999999999999964   78999999998864 233344567888999887

Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....

>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase

Probab=99.44  E-value=3.2e-13  Score=84.78  Aligned_cols=71  Identities=17%  Similarity=0.350  Sum_probs=59.8

Q ss_pred             cH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCccccccccccccccC
Q psy8010          12 IP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDVDVREILGTPDYVGE   87 (87)
Q Consensus        12 ~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~~~~~~~gt~~y~aP   87 (87)
                      ++ +.+..++.|++.++  .++|+.+++|+|++|.|++++.+   ..++++|||++.............|++.|+||
T Consensus       115 l~~~~~~~~~~ql~~aL--~~LH~~gi~H~dlkp~Nil~~~~---~~~kL~Dfg~~~~~~~~~~~~~~~~~~~y~aP  186 (353)
T cd07850         115 LDHERMSYLLYQMLCGI--KHLHSAGIIHRDLKPSNIVVKSD---CTLKILDFGLARTAGTSFMMTPYVVTRYYRAP  186 (353)
T ss_pred             CCHHHHHHHHHHHHHHH--HHHHhCCeeeCCCCHHHEEECCC---CCEEEccCccceeCCCCCCCCCCcccccccCH
Confidence            45 46788899999999  99999999999999999999885   78999999999876544334456788889987

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK

>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5

Probab=99.44  E-value=2.4e-13  Score=82.67  Aligned_cols=74  Identities=27%  Similarity=0.374  Sum_probs=59.8

Q ss_pred             hhhcH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCc-ccccccccccccc
Q psy8010           9 VARIP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDV-DVREILGTPDYVG   86 (87)
Q Consensus         9 ~~~~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~-~~~~~~gt~~y~a   86 (87)
                      .+.++ +.+..++.|++.++  .++|+++++|+|++|.|++++.+   ..++++|||++....... ......+++.|+|
T Consensus        93 ~~~~~~~~~~~~~~qi~~al--~~LH~~~i~H~dl~~~nil~~~~---~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~a  167 (284)
T cd07839          93 NGDIDPEIVKSFMFQLLKGL--AFCHSHNVLHRDLKPQNLLINKN---GELKLADFGLARAFGIPVRCYSAEVVTLWYRP  167 (284)
T ss_pred             CCCCCHHHHHHHHHHHHHHH--HHHHHCCEecCCCCHHHEEEcCC---CcEEECccchhhccCCCCCCcCCCccccCCcC
Confidence            34455 57899999999999  99999999999999999999875   789999999987653322 2234567888888


Q ss_pred             C
Q psy8010          87 E   87 (87)
Q Consensus        87 P   87 (87)
                      |
T Consensus       168 P  168 (284)
T cd07839         168 P  168 (284)
T ss_pred             h
Confidence            7

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also

>KOG4279|consensus

Probab=99.43  E-value=2.6e-13  Score=91.43  Aligned_cols=82  Identities=16%  Similarity=0.241  Sum_probs=68.6

Q ss_pred             hhHHHHHhhhcH--H-HHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCC-ccccc
Q psy8010           2 TNFIITLVARIP--R-LVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRD-VDVRE   77 (87)
Q Consensus         2 ~~~~~~~~~~~~--~-~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~-~~~~~   77 (87)
                      +.+++.+-++++  | ....+-.|++.|+  .|+|...|+|||+|-.|++++.=  .+-+|++|||.++++..- .-..+
T Consensus       660 SsLLrskWGPlKDNEstm~fYtkQILeGL--kYLHen~IVHRDIKGDNVLvNTy--SGvlKISDFGTsKRLAginP~TET  735 (1226)
T KOG4279|consen  660 SSLLRSKWGPLKDNESTMNFYTKQILEGL--KYLHENKIVHRDIKGDNVLVNTY--SGVLKISDFGTSKRLAGINPCTET  735 (1226)
T ss_pred             HHHHHhccCCCccchhHHHHHHHHHHHHh--hhhhhcceeeccccCCcEEEeec--cceEEecccccchhhccCCccccc
Confidence            456777777775  3 5788899999999  99999999999999999999875  467999999999987432 23467


Q ss_pred             cccccccccC
Q psy8010          78 ILGTPDYVGE   87 (87)
Q Consensus        78 ~~gt~~y~aP   87 (87)
                      +.||.-||||
T Consensus       736 FTGTLQYMAP  745 (1226)
T KOG4279|consen  736 FTGTLQYMAP  745 (1226)
T ss_pred             cccchhhhCh
Confidence            8999999998

>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor

Probab=99.43  E-value=4.5e-13  Score=84.99  Aligned_cols=69  Identities=16%  Similarity=0.314  Sum_probs=55.5

Q ss_pred             HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCccc---cccccccccccC
Q psy8010          14 RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDVDV---REILGTPDYVGE   87 (87)
Q Consensus        14 ~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~~~---~~~~gt~~y~aP   87 (87)
                      +.+..++.|++.++  .|+|+++++|+|++|.|++++..   ..++++|||++..+......   ....+++.||||
T Consensus       212 ~~~~~i~~qi~~aL--~yLH~~giiHrDLkp~Nil~~~~---~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aP  283 (374)
T cd05106         212 DDLLRFSSQVAQGM--DFLASKNCIHRDVAARNVLLTDG---RVAKICDFGLARDIMNDSNYVVKGNARLPVKWMAP  283 (374)
T ss_pred             HHHHHHHHHHHHHH--HHHHHCCEEeccCchheEEEeCC---CeEEEeeceeeeeccCCcceeeccCCCCccceeCH
Confidence            56889999999999  99999999999999999999874   78999999998865433221   122345679887

Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti

>KOG0587|consensus

Probab=99.42  E-value=7.2e-13  Score=90.12  Aligned_cols=80  Identities=25%  Similarity=0.429  Sum_probs=65.3

Q ss_pred             hHHHHHhh-hcH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCc-cccccc
Q psy8010           3 NFIITLVA-RIP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDV-DVREIL   79 (87)
Q Consensus         3 ~~~~~~~~-~~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~-~~~~~~   79 (87)
                      +.++.+.+ ++. +...+++++.+.++  .++|...++|||+|-.|++++.+   +.+|++|||.+..+.... ...+.+
T Consensus       110 DLVKn~~g~rl~E~~IaYI~re~lrgl--~HLH~nkviHRDikG~NiLLT~e---~~VKLvDFGvSaQldsT~grRnT~i  184 (953)
T KOG0587|consen  110 DLVKNTKGNRLKEEWIAYILREILRGL--AHLHNNKVIHRDIKGQNVLLTEN---AEVKLVDFGVSAQLDSTVGRRNTFI  184 (953)
T ss_pred             HHHhhhcccchhhHHHHHHHHHHHHHH--HHHhhcceeeecccCceEEEecc---CcEEEeeeeeeeeeecccccccCcC
Confidence            44444443 333 46888999999999  99999999999999999999995   899999999988764332 346789


Q ss_pred             cccccccC
Q psy8010          80 GTPDYVGE   87 (87)
Q Consensus        80 gt~~y~aP   87 (87)
                      |||+||||
T Consensus       185 GtP~WMAP  192 (953)
T KOG0587|consen  185 GTPYWMAP  192 (953)
T ss_pred             CCcccccc
Confidence            99999998

>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase

Probab=99.42  E-value=6.3e-13  Score=80.91  Aligned_cols=73  Identities=22%  Similarity=0.401  Sum_probs=59.0

Q ss_pred             hhcH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCc-cccccccccccccC
Q psy8010          10 ARIP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDV-DVREILGTPDYVGE   87 (87)
Q Consensus        10 ~~~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~-~~~~~~gt~~y~aP   87 (87)
                      ..++ +.+..++.|++.++  .++|+.+++|+|++|.|++++.+   ..++++|||++....... ......|++.|+||
T Consensus        98 ~~l~~~~~~~~~~qi~~~L--~~LH~~~i~H~dlkp~nili~~~---~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aP  172 (282)
T cd06643          98 RPLTEPQIRVVCKQTLEAL--NYLHENKIIHRDLKAGNILFTLD---GDIKLADFGVSAKNTRTIQRRDSFIGTPYWMAP  172 (282)
T ss_pred             CCCCHHHHHHHHHHHHHHH--HHHHHCCeeecCCCcccEEEccC---CCEEEccccccccccccccccccccccccccCH
Confidence            3455 57888999999999  99999999999999999999875   689999999987653221 22345788889887

Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.

>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3

Probab=99.42  E-value=4.9e-13  Score=81.58  Aligned_cols=71  Identities=15%  Similarity=0.278  Sum_probs=58.7

Q ss_pred             hcH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCccccccccccccccC
Q psy8010          11 RIP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDVDVREILGTPDYVGE   87 (87)
Q Consensus        11 ~~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~~~~~~~gt~~y~aP   87 (87)
                      .++ +.+..++.|++.++  .++|+.+++|+|++|+|++++.+   ..++++|||++....... .....|++.|+||
T Consensus        93 ~l~~~~~~~i~~qi~~al--~~lH~~~ivH~dikp~Nil~~~~---~~~~l~dfg~~~~~~~~~-~~~~~~~~~y~aP  164 (279)
T cd05633          93 VFSEKEMRFYATEIILGL--EHMHNRFVVYRDLKPANILLDEH---GHVRISDLGLACDFSKKK-PHASVGTHGYMAP  164 (279)
T ss_pred             CCCHHHHHHHHHHHHHHH--HHHHHCCcCCCCCCHHHEEECCC---CCEEEccCCcceeccccC-ccCcCCCcCccCH
Confidence            355 57889999999999  99999999999999999999874   789999999987653322 2345788899987

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi

>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase

Probab=99.41  E-value=5.7e-13  Score=89.96  Aligned_cols=71  Identities=23%  Similarity=0.427  Sum_probs=58.6

Q ss_pred             cH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCC-ccccccccccccccC
Q psy8010          12 IP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRD-VDVREILGTPDYVGE   87 (87)
Q Consensus        12 ~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~-~~~~~~~gt~~y~aP   87 (87)
                      ++ +.+..++.|++.+|  .|+|.++++|+|++|+||++..+   ..++++|||+++..... .......+|+.|++|
T Consensus       101 l~~~~~~~i~~qil~aL--~yLH~~gIiHrDLKP~NILl~~~---g~vkL~DFGls~~~~~~~~~~~~~~~t~~~~~p  173 (669)
T cd05610         101 FDEEMAVKYISEVALAL--DYLHRHGIIHRDLKPDNMLISNE---GHIKLTDFGLSKVTLNRELNMMDILTTPSMAKP  173 (669)
T ss_pred             CCHHHHHHHHHHHHHHH--HHHHhCCEEeCCccHHHEEEcCC---CCEEEEeCCCCccccCCcccccccccCccccCc
Confidence            44 57899999999999  99999999999999999999874   78999999999865432 233456778887776

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481

>KOG1163|consensus

Probab=99.41  E-value=8.8e-13  Score=79.72  Aligned_cols=83  Identities=16%  Similarity=0.280  Sum_probs=64.9

Q ss_pred             hhHHHHHhhhcH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCc-------
Q psy8010           2 TNFIITLVARIP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDV-------   73 (87)
Q Consensus         2 ~~~~~~~~~~~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~-------   73 (87)
                      ++++..+..+|+ +.+.-++.|++..+  +|+|.++++|||+||+|++..-..-...+.++|||+++.+.+..       
T Consensus        98 EdLfnfC~R~ftmkTvLMLaDQml~Ri--EyvH~r~fiHRDIKPdNFLMGlgrh~~kl~LIDFGLaKky~d~~t~~HIpy  175 (341)
T KOG1163|consen   98 EDLFNFCSRRFTMKTVLMLADQMLSRI--EYVHLRNFIHRDIKPDNFLMGLGRHCNKLYLIDFGLAKKYRDIRTRQHIPY  175 (341)
T ss_pred             HHHHHHHhhhhhHHhHHHHHHHHHHHH--HHHHhhccccccCCccceeeccccccceEEEEeccchhhhccccccccCcc
Confidence            345666777788 68888999999999  99999999999999999998754223568999999999874322       


Q ss_pred             -ccccccccccccc
Q psy8010          74 -DVREILGTPDYVG   86 (87)
Q Consensus        74 -~~~~~~gt~~y~a   86 (87)
                       ..+...||..|.|
T Consensus       176 re~r~ltGTaRYAS  189 (341)
T KOG1163|consen  176 REDRNLTGTARYAS  189 (341)
T ss_pred             ccCCccceeeeehh
Confidence             2245688888865

>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase

Probab=99.41  E-value=4e-13  Score=82.54  Aligned_cols=72  Identities=25%  Similarity=0.309  Sum_probs=58.1

Q ss_pred             hcH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCc-cccccccccccccC
Q psy8010          11 RIP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDV-DVREILGTPDYVGE   87 (87)
Q Consensus        11 ~~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~-~~~~~~gt~~y~aP   87 (87)
                      .++ +.+..++.|++.++  .++|+.+++|+|++|+|++++.+   ..++++|||++....... ......+++.|+||
T Consensus       100 ~~~~~~~~~~~~qi~~aL--~~lH~~~i~H~dlkp~Nil~~~~---~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~~P  173 (301)
T cd07873         100 SINMHNVKLFLFQLLRGL--NYCHRRKVLHRDLKPQNLLINER---GELKLADFGLARAKSIPTKTYSNEVVTLWYRPP  173 (301)
T ss_pred             CCCHHHHHHHHHHHHHHH--HHHHhCCeeCCCCCHHHEEECCC---CcEEECcCcchhccCCCCCcccccceeecccCc
Confidence            344 57888999999999  99999999999999999999875   789999999987643222 22344678888887

Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl

>KOG1165|consensus

Probab=99.41  E-value=1.1e-12  Score=82.05  Aligned_cols=81  Identities=15%  Similarity=0.313  Sum_probs=64.7

Q ss_pred             HHHHHhhhcH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCC--CCcEEEEeeccceecCCCc-------
Q psy8010           4 FIITLVARIP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYP--DCDVKLCDFGISRHLSRDV-------   73 (87)
Q Consensus         4 ~~~~~~~~~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~--~~~~kl~dfg~~~~~~~~~-------   73 (87)
                      ++--+..+|+ +.+.-++.|++..+  +++|++.++.||+||+|++++..+.  ...+.++|||+|+.+.+..       
T Consensus       113 LFD~CgR~FSvKTV~miA~Qmi~ri--e~vH~k~LIYRDIKPdNFLIGrp~~k~~n~IhiiDFGmAK~YrDp~TkqHIPY  190 (449)
T KOG1165|consen  113 LFDLCGRRFSVKTVAMIAKQMITRI--EYVHEKDLIYRDIKPDNFLIGRPGTKDANVIHIIDFGMAKEYRDPKTKQHIPY  190 (449)
T ss_pred             HHHHhcCcccHHhHHHHHHHHHHHH--HHHHhcceeecccCccceeecCCCCCCCceEEEEeccchhhhcCccccccCcc
Confidence            3334445677 67888999999999  9999999999999999999987642  2238899999999875543       


Q ss_pred             -ccccccccccccc
Q psy8010          74 -DVREILGTPDYVG   86 (87)
Q Consensus        74 -~~~~~~gt~~y~a   86 (87)
                       ..+...||..|||
T Consensus       191 rE~KSLsGTARYMS  204 (449)
T KOG1165|consen  191 REHKSLSGTARYMS  204 (449)
T ss_pred             ccccccccceeeeE
Confidence             2356799999997

>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1

Probab=99.41  E-value=6.7e-13  Score=81.15  Aligned_cols=71  Identities=20%  Similarity=0.283  Sum_probs=59.2

Q ss_pred             cH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCC-ccccccccccccccC
Q psy8010          12 IP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRD-VDVREILGTPDYVGE   87 (87)
Q Consensus        12 ~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~-~~~~~~~gt~~y~aP   87 (87)
                      ++ +.+..++.|++.++  .|+|+.+++|+|++|+|++++.+   ..++++|||++..+... .......+++.|+||
T Consensus       103 l~~~~~~~i~~qi~~aL--~~LH~~~i~H~dl~p~nili~~~---~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~~aP  175 (293)
T cd07843         103 FLQSEVKCLMLQLLSGV--AHLHDNWILHRDLKTSNLLLNNR---GILKICDFGLAREYGSPLKPYTQLVVTLWYRAP  175 (293)
T ss_pred             CCHHHHHHHHHHHHHHH--HHHHHCCeeeccCCHHHEEECCC---CcEEEeecCceeeccCCccccccccccccccCc
Confidence            45 57889999999999  99999999999999999999885   78999999998876443 233445678888887

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the

>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2

Probab=99.40  E-value=5.1e-13  Score=81.27  Aligned_cols=69  Identities=14%  Similarity=0.243  Sum_probs=55.5

Q ss_pred             HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCcc---ccccccccccccC
Q psy8010          14 RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDVD---VREILGTPDYVGE   87 (87)
Q Consensus        14 ~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~~---~~~~~gt~~y~aP   87 (87)
                      ..+..++.|++.++  .++|+++++|+|++|.|+++..+   ..++++|||+++.+.....   .....+++.|+||
T Consensus       124 ~~~~~~~~ql~~aL--~~lH~~gi~H~dlkp~Nil~~~~---~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aP  195 (283)
T cd05091         124 ADFVHIVTQIAAGM--EFLSSHHVVHKDLATRNVLVFDK---LNVKISDLGLFREVYAADYYKLMGNSLLPIRWMSP  195 (283)
T ss_pred             HHHHHHHHHHHHHH--HHHHHcCccccccchhheEecCC---CceEecccccccccccchheeeccCccCCccccCH
Confidence            46788899999999  99999999999999999999874   7799999999886533221   1233556778887

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>KOG0605|consensus

Probab=99.40  E-value=4.1e-13  Score=87.32  Aligned_cols=52  Identities=17%  Similarity=0.264  Sum_probs=47.8

Q ss_pred             cH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeecccee
Q psy8010          12 IP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRH   68 (87)
Q Consensus        12 ~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~   68 (87)
                      ++ +.++.++.+++.|+  ..+|..|++|||+||+|++++..   +++|++|||++..
T Consensus       238 L~e~~arfYiaE~vlAI--~~iH~~gyIHRDIKPdNlLiD~~---GHiKLSDFGLs~g  290 (550)
T KOG0605|consen  238 LTEDWARFYIAETVLAI--ESIHQLGYIHRDIKPDNLLIDAK---GHIKLSDFGLSTG  290 (550)
T ss_pred             CchHHHHHHHHHHHHHH--HHHHHcCcccccCChhheeecCC---CCEeeccccccch
Confidence            44 58999999999999  99999999999999999999995   8999999999763

>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases

Probab=99.40  E-value=8.3e-13  Score=78.92  Aligned_cols=73  Identities=12%  Similarity=0.218  Sum_probs=59.4

Q ss_pred             hhcH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCc---cccccccccccc
Q psy8010          10 ARIP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDV---DVREILGTPDYV   85 (87)
Q Consensus        10 ~~~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~---~~~~~~gt~~y~   85 (87)
                      ..++ ..+..++.|++.++  .++|+++++|+|++|.|++++.+   ..++++|||.+.......   ......+++.|+
T Consensus       100 ~~~~~~~~~~~~~~l~~al--~~lH~~~i~H~di~p~nili~~~---~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~  174 (262)
T cd00192         100 STLSLKDLLSFAIQIAKGM--EYLASKKFVHRDLAARNCLVGED---LVVKISDFGLSRDVYDDDYYRKKTGGKLPIRWM  174 (262)
T ss_pred             ccCCHHHHHHHHHHHHHHH--HHHHcCCcccCccCcceEEECCC---CcEEEcccccccccccccccccccCCCcCcccc
Confidence            3445 58899999999999  99999999999999999999985   789999999988764332   223346677888


Q ss_pred             cC
Q psy8010          86 GE   87 (87)
Q Consensus        86 aP   87 (87)
                      ||
T Consensus       175 aP  176 (262)
T cd00192         175 AP  176 (262)
T ss_pred             CH
Confidence            87

Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan

>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors

Probab=99.40  E-value=1e-12  Score=82.30  Aligned_cols=71  Identities=17%  Similarity=0.344  Sum_probs=57.0

Q ss_pred             cH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCcc---ccccccccccccC
Q psy8010          12 IP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDVD---VREILGTPDYVGE   87 (87)
Q Consensus        12 ~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~~---~~~~~gt~~y~aP   87 (87)
                      ++ +.+..++.|++.++  .|+|+.+++|+|++|.|++++.+   ..++++|||++..+.....   .....++..|+||
T Consensus       170 l~~~~~~~~~~qi~~aL--~~lH~~~ivHrDikp~Nill~~~---~~vkL~DfG~a~~~~~~~~~~~~~~~~~~~~y~aP  244 (337)
T cd05054         170 LTLEDLISYSFQVARGM--EFLASRKCIHRDLAARNILLSEN---NVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAP  244 (337)
T ss_pred             CCHHHHHHHHHHHHHHH--HHHHhCCeecCCCCcceEEEeCC---CcEEEeccccchhcccCcchhhccCCCCCccccCc
Confidence            44 57889999999999  99999999999999999999974   6799999999987633221   1234556678887

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto

>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=99.40  E-value=9e-13  Score=79.75  Aligned_cols=73  Identities=19%  Similarity=0.190  Sum_probs=55.8

Q ss_pred             hhcH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCC----CCcEEEEeeccceecCCCcccccccccccc
Q psy8010          10 ARIP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYP----DCDVKLCDFGISRHLSRDVDVREILGTPDY   84 (87)
Q Consensus        10 ~~~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~----~~~~kl~dfg~~~~~~~~~~~~~~~gt~~y   84 (87)
                      ..++ ..+..++.|++.++  .|+|+.+++|+|++|.|+++...+.    ...++++|||++.....   .....|+..|
T Consensus       100 ~~~~~~~~~~i~~qi~~~l--~~lH~~~ivH~dlkp~Nill~~~~~~~~~~~~~~l~d~g~~~~~~~---~~~~~~~~~y  174 (262)
T cd05077         100 DVLTTPWKFKVAKQLASAL--SYLEDKDLVHGNVCTKNILLAREGIDGECGPFIKLSDPGIPITVLS---RQECVERIPW  174 (262)
T ss_pred             CCCCHHHHHHHHHHHHHHH--HHhhhCCeECCCCCcccEEEecCCccCCCCceeEeCCCCCCccccC---cccccccccc
Confidence            3455 47888999999999  9999999999999999999976421    11389999998765432   1234677778


Q ss_pred             ccC
Q psy8010          85 VGE   87 (87)
Q Consensus        85 ~aP   87 (87)
                      +||
T Consensus       175 ~aP  177 (262)
T cd05077         175 IAP  177 (262)
T ss_pred             cCh
Confidence            887

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom

>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4

Probab=99.39  E-value=1.5e-12  Score=78.02  Aligned_cols=71  Identities=25%  Similarity=0.394  Sum_probs=58.9

Q ss_pred             cH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCC-ccccccccccccccC
Q psy8010          12 IP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRD-VDVREILGTPDYVGE   87 (87)
Q Consensus        12 ~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~-~~~~~~~gt~~y~aP   87 (87)
                      ++ +++..++.|++.++  .++|+.+++|+|++|.|++++..   ..++++|||++..+... .......|++.|+||
T Consensus        99 l~~~~~~~~~~~l~~~l--~~lH~~~i~H~di~p~nil~~~~---~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~aP  171 (257)
T cd08223          99 LPENQVVEWFVQIAMAL--QYLHEKHILHRDLKTQNVFLTRT---NIIKVGDLGIARVLENQCDMASTLIGTPYYMSP  171 (257)
T ss_pred             CCHHHHHHHHHHHHHHH--HHHHhCCeeccCCCchhEEEecC---CcEEEecccceEEecccCCccccccCCcCccCh
Confidence            45 57889999999999  99999999999999999999874   78999999998866322 222445788889987

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.

>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3

Probab=99.39  E-value=8.3e-13  Score=79.68  Aligned_cols=72  Identities=24%  Similarity=0.421  Sum_probs=59.2

Q ss_pred             hcH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCc-cccccccccccccC
Q psy8010          11 RIP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDV-DVREILGTPDYVGE   87 (87)
Q Consensus        11 ~~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~-~~~~~~gt~~y~aP   87 (87)
                      .++ +++..++.|++.++  .|+|..+++|+|++|.|+++...   ..++++|||++....... ......|++.|+||
T Consensus       102 ~~~~~~~~~~~~~i~~~l--~~lH~~~i~H~dlkp~nili~~~---~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~aP  175 (267)
T cd06645         102 PLSESQIAYVSRETLQGL--YYLHSKGKMHRDIKGANILLTDN---GHVKLADFGVSAQITATIAKRKSFIGTPYWMAP  175 (267)
T ss_pred             CCCHHHHHHHHHHHHHHH--HHHHHCCeecCCCCHHHEEECCC---CCEEECcceeeeEccCcccccccccCcccccCh
Confidence            345 57889999999999  99999999999999999999874   789999999987653322 22445788999987

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases

Probab=99.39  E-value=1.1e-12  Score=78.58  Aligned_cols=72  Identities=17%  Similarity=0.160  Sum_probs=54.7

Q ss_pred             hcH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCC----CCCcEEEEeeccceecCCCccccccccccccc
Q psy8010          11 RIP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEY----PDCDVKLCDFGISRHLSRDVDVREILGTPDYV   85 (87)
Q Consensus        11 ~~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~----~~~~~kl~dfg~~~~~~~~~~~~~~~gt~~y~   85 (87)
                      .++ ..+..++.|++.++  .|+|+++++|+|++|.|++++..+    ....++++|||++.....   .....++..|+
T Consensus        97 ~~~~~~~~~~~~~i~~~l--~~LH~~~i~H~dlkp~Nill~~~~~~~~~~~~~kl~Dfg~a~~~~~---~~~~~~~~~y~  171 (259)
T cd05037          97 NVSLHWKLDVAKQLASAL--HYLEDKKLVHGNVCGKNILVARYGLNEGYVPFIKLSDPGIPITVLS---REERVERIPWI  171 (259)
T ss_pred             CCCHHHHHHHHHHHHHHH--HHHhhCCeecccCccceEEEecCccccCCceeEEeCCCCccccccc---ccccccCCCcc
Confidence            445 46788899999999  999999999999999999998752    112599999999876533   11234555677


Q ss_pred             cC
Q psy8010          86 GE   87 (87)
Q Consensus        86 aP   87 (87)
                      ||
T Consensus       172 aP  173 (259)
T cd05037         172 AP  173 (259)
T ss_pred             Ch
Confidence            66

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki

>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase

Probab=99.39  E-value=1.4e-12  Score=79.80  Aligned_cols=73  Identities=21%  Similarity=0.377  Sum_probs=58.7

Q ss_pred             hhcH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCC-ccccccccccccccC
Q psy8010          10 ARIP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRD-VDVREILGTPDYVGE   87 (87)
Q Consensus        10 ~~~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~-~~~~~~~gt~~y~aP   87 (87)
                      ..++ +.+..++.|++.++  .++|+.+++|+|++|.|++++.+   ..++++|||++...... .......+++.|+||
T Consensus       105 ~~l~~~~~~~~~~ql~~~l--~~lH~~~i~H~dlkp~Nili~~~---~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aP  179 (292)
T cd06644         105 RGLTEPQIQVICRQMLEAL--QYLHSMKIIHRDLKAGNVLLTLD---GDIKLADFGVSAKNVKTLQRRDSFIGTPYWMAP  179 (292)
T ss_pred             CCCCHHHHHHHHHHHHHHH--HHHhcCCeeecCCCcceEEEcCC---CCEEEccCccceeccccccccceecCCccccCc
Confidence            3445 57899999999999  99999999999999999999874   78999999988764322 122345678888887

Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.

>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase

Probab=99.39  E-value=8.9e-13  Score=80.08  Aligned_cols=73  Identities=21%  Similarity=0.346  Sum_probs=60.1

Q ss_pred             hhcH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCc--ccccccccccccc
Q psy8010          10 ARIP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDV--DVREILGTPDYVG   86 (87)
Q Consensus        10 ~~~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~--~~~~~~gt~~y~a   86 (87)
                      ..++ +.+..++.|++.++  .++|+.+++|+|++|.|++++..   ..++++|||++.......  ......|+..|+|
T Consensus        94 ~~~~~~~~~~~~~~i~~~l--~~lH~~~i~H~dl~p~ni~~~~~---~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~a  168 (286)
T cd07832          94 RPLPEAQVKSYMRMLLKGV--AYMHANGIMHRDLKPANLLISAD---GVLKIADFGLARLFSEEEPRLYSHQVATRWYRA  168 (286)
T ss_pred             CCCCHHHHHHHHHHHHHHH--HHHHHCCeecCCcCHHHEEEcCC---CcEEEeeeeecccccCCCCCccccccCcccccC
Confidence            3455 57889999999999  99999999999999999999984   789999999988764332  2334578888988


Q ss_pred             C
Q psy8010          87 E   87 (87)
Q Consensus        87 P   87 (87)
                      |
T Consensus       169 P  169 (286)
T cd07832         169 P  169 (286)
T ss_pred             c
Confidence            7

Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea

>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa

Probab=99.39  E-value=1.1e-12  Score=79.06  Aligned_cols=74  Identities=15%  Similarity=0.189  Sum_probs=56.5

Q ss_pred             hhhcH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCccc----cccccccc
Q psy8010           9 VARIP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDVDV----REILGTPD   83 (87)
Q Consensus         9 ~~~~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~~~----~~~~gt~~   83 (87)
                      ...++ +.+..++.|++.++  .++|+++++|+|++|.|+++..+   ..++++|||++.....+...    ....+++.
T Consensus        89 ~~~~~~~~~~~~~~~i~~~l--~~lH~~~i~H~dlkp~nil~~~~---~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~  163 (257)
T cd05115          89 KDEITVSNVVELMHQVSMGM--KYLEGKNFVHRDLAARNVLLVNQ---HYAKISDFGLSKALGADDSYYKARSAGKWPLK  163 (257)
T ss_pred             CCCCCHHHHHHHHHHHHHHH--HHHHhcCeeecccchheEEEcCC---CcEEeccCCccccccCCccceeccCCCCCCcc
Confidence            33455 57889999999999  99999999999999999999874   78999999998765333221    11122456


Q ss_pred             cccC
Q psy8010          84 YVGE   87 (87)
Q Consensus        84 y~aP   87 (87)
                      |+||
T Consensus       164 y~aP  167 (257)
T cd05115         164 WYAP  167 (257)
T ss_pred             cCCH
Confidence            7776

Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho

>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase

Probab=99.38  E-value=1.1e-12  Score=80.16  Aligned_cols=69  Identities=25%  Similarity=0.260  Sum_probs=56.2

Q ss_pred             HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCC-CccccccccccccccC
Q psy8010          14 RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSR-DVDVREILGTPDYVGE   87 (87)
Q Consensus        14 ~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~-~~~~~~~~gt~~y~aP   87 (87)
                      ..+..++.|++.++  .++|+.+++|+|++|+|++++.+   ..++++|||+++.... ........+++.|+||
T Consensus       103 ~~~~~~~~qi~~~L--~~lH~~~i~H~dlkp~Nil~~~~---~~~~l~Dfg~~~~~~~~~~~~~~~~~~~~y~aP  172 (291)
T cd07870         103 YNVRLFMFQLLRGL--AYIHGQHILHRDLKPQNLLISYL---GELKLADFGLARAKSIPSQTYSSEVVTLWYRPP  172 (291)
T ss_pred             HHHHHHHHHHHHHH--HHHHhCCcccCCCChHHEEEcCC---CcEEEeccccccccCCCCCCCCCccccccccCC
Confidence            56788899999999  99999999999999999999874   7899999998875422 2222344678888887

Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess

>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase

Probab=99.38  E-value=1.2e-12  Score=79.37  Aligned_cols=71  Identities=24%  Similarity=0.367  Sum_probs=59.7

Q ss_pred             hcH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCccccccccccccccC
Q psy8010          11 RIP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDVDVREILGTPDYVGE   87 (87)
Q Consensus        11 ~~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~~~~~~~gt~~y~aP   87 (87)
                      .++ +.+..++.|++.++  .++|..+++|+|++|.|++++.    ..++++|||++..+..........+++.|+||
T Consensus        96 ~~~~~~~~~~~~qi~~~L--~~LH~~~i~H~dl~p~ni~l~~----~~~kl~dfg~~~~~~~~~~~~~~~~~~~y~aP  167 (282)
T cd07831          96 PLPEKRVKSYMYQLLKSL--DHMHRNGIFHRDIKPENILIKD----DILKLADFGSCRGIYSKPPYTEYISTRWYRAP  167 (282)
T ss_pred             CCCHHHHHHHHHHHHHHH--HHHHHCCceecccCHHHEEEcC----CCeEEEecccccccccCCCcCCCCCCcccCCh
Confidence            455 57899999999999  9999999999999999999987    57999999998876544444455778888887

Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.

>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase

Probab=99.38  E-value=1.3e-12  Score=79.68  Aligned_cols=71  Identities=15%  Similarity=0.273  Sum_probs=58.8

Q ss_pred             hcH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCccccccccccccccC
Q psy8010          11 RIP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDVDVREILGTPDYVGE   87 (87)
Q Consensus        11 ~~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~~~~~~~gt~~y~aP   87 (87)
                      .++ +.+..++.|++.++  .|+|+.+++|+|++|.|++++.+   ..++++|||++..+... ......|++.|+||
T Consensus        93 ~l~~~~~~~~~~ql~~~l--~~lH~~~i~H~di~p~nili~~~---~~~kl~dfg~~~~~~~~-~~~~~~~~~~y~aP  164 (278)
T cd05606          93 VFSEAEMRFYAAEIILGL--EHMHNRFVVYRDLKPANILLDEH---GHVRISDLGLACDFSKK-KPHASVGTHGYMAP  164 (278)
T ss_pred             CCCHHHHHHHHHHHHHHH--HHHHHCCEEcCCCCHHHEEECCC---CCEEEccCcCccccCcc-CCcCcCCCcCCcCc
Confidence            455 57899999999999  99999999999999999999875   67999999998765322 22345788899987

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co

>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases

Probab=99.38  E-value=1.3e-12  Score=79.41  Aligned_cols=73  Identities=15%  Similarity=0.206  Sum_probs=56.4

Q ss_pred             hhcH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCccccc---cccccccc
Q psy8010          10 ARIP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDVDVRE---ILGTPDYV   85 (87)
Q Consensus        10 ~~~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~~~~~---~~gt~~y~   85 (87)
                      ..++ +.+..++.|++.++  .|+|+.+++|+|++|.|+++..+   ..++++|||.++.+........   ..++..|+
T Consensus       104 ~~~~~~~~~~~~~qi~~~l--~~LH~~~i~H~di~p~nil~~~~---~~~kL~dfg~~~~~~~~~~~~~~~~~~~~~~y~  178 (279)
T cd05057         104 DNIGSQYLLNWCVQIAKGM--SYLEEKRLVHRDLAARNVLVKTP---QHVKITDFGLAKLLDVDEKEYHAEGGKVPIKWM  178 (279)
T ss_pred             CCCCHHHHHHHHHHHHHHH--HHHHhCCEEecccCcceEEEcCC---CeEEECCCcccccccCcccceecCCCccccccc
Confidence            3455 57889999999999  99999999999999999999874   6899999999987643332211   12245677


Q ss_pred             cC
Q psy8010          86 GE   87 (87)
Q Consensus        86 aP   87 (87)
                      ||
T Consensus       179 ~P  180 (279)
T cd05057         179 AL  180 (279)
T ss_pred             CH
Confidence            76

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea

>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1

Probab=99.38  E-value=9.5e-13  Score=82.03  Aligned_cols=71  Identities=23%  Similarity=0.484  Sum_probs=58.6

Q ss_pred             cH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCc-----cccccccccccc
Q psy8010          12 IP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDV-----DVREILGTPDYV   85 (87)
Q Consensus        12 ~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~-----~~~~~~gt~~y~   85 (87)
                      ++ +.+..++.|++.++  .++|.++++|+|++|.|+++...   ..++++|||++..+....     ......|++.|+
T Consensus       102 ~~~~~~~~~~~qi~~aL--~~LH~~givH~dlkp~Nili~~~---~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~g~~~y~  176 (332)
T cd07857         102 LTDAHFQSFIYQILCGL--KYIHSANVLHRDLKPGNLLVNAD---CELKICDFGLARGFSENPGENAGFMTEYVATRWYR  176 (332)
T ss_pred             CCHHHHHHHHHHHHHHH--HHHHhCCcccCCCCHHHeEEcCC---CCEEeCcCCCceecccccccccccccCcccCcccc
Confidence            44 57888999999999  99999999999999999999885   789999999988653221     123457889999


Q ss_pred             cC
Q psy8010          86 GE   87 (87)
Q Consensus        86 aP   87 (87)
                      ||
T Consensus       177 aP  178 (332)
T cd07857         177 AP  178 (332)
T ss_pred             Cc
Confidence            88

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co

>PRK09188 serine/threonine protein kinase; Provisional

Probab=99.38  E-value=8.3e-13  Score=83.88  Aligned_cols=66  Identities=14%  Similarity=0.157  Sum_probs=52.7

Q ss_pred             HHHHHHHHHHHHHHHhhhCCceecCC-CCCceEeeeCCCCCcEEEEeeccceecCCCcc---------cccccccccccc
Q psy8010          17 AKVTVTLLGSLNHHFTSTHSLYRSCS-QPQNLVLTGEYPDCDVKLCDFGISRHLSRDVD---------VREILGTPDYVG   86 (87)
Q Consensus        17 ~~~~~q~~~~l~~~~~h~~~~~h~~~-~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~~---------~~~~~gt~~y~a   86 (87)
                      ..++.|++.++  .++|++|++|+|+ ||+|++++.+   ..++++|||+++.+.....         .....+++.|+|
T Consensus       114 ~~~~~~i~~aL--~~lH~~gIiHrDL~KP~NILv~~~---~~ikLiDFGlA~~~~~~~~~~~~~~~~d~~~~~~~~~~~~  188 (365)
T PRK09188        114 PAWFRSAHRAL--RDLHRAGITHNDLAKPQNWLMGPD---GEAAVIDFQLASVFRRRGALYRIAAYEDLRHLLKHKRTYA  188 (365)
T ss_pred             HHHHHHHHHHH--HHHHHCCCeeCCCCCcceEEEcCC---CCEEEEECccceecccCcchhhhhhhhhhhhhhccCccCC
Confidence            46788999999  9999999999999 9999999764   6799999999997643321         134466777777


Q ss_pred             C
Q psy8010          87 E   87 (87)
Q Consensus        87 P   87 (87)
                      |
T Consensus       189 p  189 (365)
T PRK09188        189 P  189 (365)
T ss_pred             c
Confidence            6

>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit

Probab=99.38  E-value=1.8e-12  Score=82.28  Aligned_cols=69  Identities=16%  Similarity=0.294  Sum_probs=55.4

Q ss_pred             HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCccc---cccccccccccC
Q psy8010          14 RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDVDV---REILGTPDYVGE   87 (87)
Q Consensus        14 ~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~~~---~~~~gt~~y~aP   87 (87)
                      +.+..++.|++.++  .|+|+.+++|+|++|.|++++.+   ..++++|||++..+......   ....+++.|+||
T Consensus       214 ~~~~~~~~qi~~~l--~~lH~~~ivH~Dlkp~Nill~~~---~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~~y~aP  285 (375)
T cd05104         214 EDLLSFSYQVAKGM--SFLASKNCIHRDLAARNILLTHG---RITKICDFGLARDIRNDSNYVVKGNARLPVKWMAP  285 (375)
T ss_pred             HHHHHHHHHHHHHH--HHHHHCCeeccCCchhhEEEECC---CcEEEecCccceeccCcccccccCCCCCCcceeCh
Confidence            57888999999999  99999999999999999999874   68999999999866433221   123345668887

Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce

>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4

Probab=99.38  E-value=1e-12  Score=80.89  Aligned_cols=72  Identities=18%  Similarity=0.246  Sum_probs=56.1

Q ss_pred             hcH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCccc---ccccccccccc
Q psy8010          11 RIP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDVDV---REILGTPDYVG   86 (87)
Q Consensus        11 ~~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~~~---~~~~gt~~y~a   86 (87)
                      .++ +.+..++.|++.++  .|+|+++++|+|++|.|+++..+   ..+|++|||++..+......   ....++..|+|
T Consensus       105 ~~~~~~~~~~~~qi~~~L--~~LH~~~ivH~dikp~Nill~~~---~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~~  179 (303)
T cd05110         105 NIGSQLLLNWCVQIAKGM--MYLEERRLVHRDLAARNVLVKSP---NHVKITDFGLARLLEGDEKEYNADGGKMPIKWMA  179 (303)
T ss_pred             CCCHHHHHHHHHHHHHHH--HHHhhcCeeccccccceeeecCC---CceEEccccccccccCcccccccCCCccccccCC
Confidence            344 47788999999999  99999999999999999999874   67999999999865432221   22344567887


Q ss_pred             C
Q psy8010          87 E   87 (87)
Q Consensus        87 P   87 (87)
                      |
T Consensus       180 P  180 (303)
T cd05110         180 L  180 (303)
T ss_pred             H
Confidence            6

Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin

>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like

Probab=99.38  E-value=8.8e-13  Score=80.14  Aligned_cols=71  Identities=24%  Similarity=0.348  Sum_probs=57.6

Q ss_pred             cH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCcc-ccccccccccccC
Q psy8010          12 IP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDVD-VREILGTPDYVGE   87 (87)
Q Consensus        12 ~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~~-~~~~~gt~~y~aP   87 (87)
                      ++ +.+..++.|++.++  .|+|+.+++|+|++|+|++++.+   ..++++|||++........ .....+++.|+||
T Consensus        98 ~~~~~~~~~~~qi~~~L--~~lH~~~i~H~dl~p~nil~~~~---~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~aP  170 (285)
T cd07861          98 MDAELVKSYLYQILQGI--LFCHSRRVLHRDLKPQNLLIDNK---GVIKLADFGLARAFGIPVRVYTHEVVTLWYRAP  170 (285)
T ss_pred             CCHHHHHHHHHHHHHHH--HHHHhCCeeecCCCHHHEEEcCC---CcEEECcccceeecCCCcccccCCcccccccCh
Confidence            44 57888999999999  99999999999999999999875   7899999999876532221 2334667888887

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2

>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases

Probab=99.38  E-value=1.4e-12  Score=78.32  Aligned_cols=73  Identities=26%  Similarity=0.421  Sum_probs=59.2

Q ss_pred             hhcH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCc-cccccccccccccC
Q psy8010          10 ARIP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDV-DVREILGTPDYVGE   87 (87)
Q Consensus        10 ~~~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~-~~~~~~gt~~y~aP   87 (87)
                      ..++ +++..++.|++.++  .++|+++++|+|++|.|++++.+   ..++++|||.+....... ......|+..|+||
T Consensus        96 ~~l~~~~~~~~~~ql~~~l--~~lh~~~i~h~dl~p~ni~i~~~---~~~~l~d~g~~~~~~~~~~~~~~~~~~~~y~~P  170 (262)
T cd06613          96 GPLSELQIAYVCRETLKGL--AYLHETGKIHRDIKGANILLTED---GDVKLADFGVSAQLTATIAKRKSFIGTPYWMAP  170 (262)
T ss_pred             cCCCHHHHHHHHHHHHHHH--HHHHhCCceecCCChhhEEECCC---CCEEECccccchhhhhhhhccccccCCccccCc
Confidence            3455 57889999999999  99999999999999999999975   789999999887654322 22345778888887

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ

>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains

Probab=99.38  E-value=2.1e-12  Score=77.32  Aligned_cols=69  Identities=25%  Similarity=0.392  Sum_probs=57.7

Q ss_pred             HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCcc-ccccccccccccC
Q psy8010          14 RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDVD-VREILGTPDYVGE   87 (87)
Q Consensus        14 ~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~~-~~~~~gt~~y~aP   87 (87)
                      +.+..++.|++.++  .++|..+++|+|++|.|++++..   ..++++|||++..+..... .....|++.|+||
T Consensus       101 ~~~~~i~~~l~~al--~~lH~~~i~h~dl~~~nili~~~---~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~aP  170 (256)
T cd08529         101 DQVWRFFIQILLGL--AHLHSKKILHRDIKSLNLFLDAY---DNVKIGDLGVAKLLSDNTNFANTIVGTPYYLSP  170 (256)
T ss_pred             HHHHHHHHHHHHHH--HHHHHCCcccCCCCcceEEEeCC---CCEEEcccccceeccCccchhhccccCccccCH
Confidence            46788899999999  99999999999999999999985   7899999999887644322 2345788889887

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc

>KOG0669|consensus

Probab=99.37  E-value=4.8e-13  Score=81.37  Aligned_cols=69  Identities=22%  Similarity=0.286  Sum_probs=57.8

Q ss_pred             HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCc-----cccccccccccccC
Q psy8010          14 RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDV-----DVREILGTPDYVGE   87 (87)
Q Consensus        14 ~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~-----~~~~~~gt~~y~aP   87 (87)
                      .++++++.+++.++  .|+|+..++|||.|+.|++++.+   +.++++|||+++.+....     ..+..+.|.+|+.|
T Consensus       124 s~Ikk~Mk~Lm~GL--~~iHr~kilHRDmKaaNvLIt~d---gilklADFGlar~fs~~~n~~kprytnrvvTLwYrpp  197 (376)
T KOG0669|consen  124 SEIKKVMKGLMNGL--YYIHRNKILHRDMKAANVLITKD---GILKLADFGLARAFSTSKNVVKPRYTNRVVTLWYRPP  197 (376)
T ss_pred             HHHHHHHHHHHHHH--HHHHHhhHHhhcccHhhEEEcCC---ceEEeeccccccceecccccCCCCcccceeeeecCCH
Confidence            47899999999999  99999999999999999999996   889999999998763322     23344668888765

>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases

Probab=99.37  E-value=9.4e-13  Score=79.59  Aligned_cols=69  Identities=13%  Similarity=0.150  Sum_probs=54.1

Q ss_pred             HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCcc---ccccccccccccC
Q psy8010          14 RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDVD---VREILGTPDYVGE   87 (87)
Q Consensus        14 ~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~~---~~~~~gt~~y~aP   87 (87)
                      +.+..++.|++.++  .|+|+.+++|+|++|.|++++.+   ..++++|||++........   .....+++.|+||
T Consensus       100 ~~~~~~~~qi~~~l--~~lH~~~ivH~dlkp~Nill~~~---~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aP  171 (269)
T cd05042         100 DVLQRMACEVASGL--LWLHQADFIHSDLALRNCQLTAD---LSVKIGDYGLALEQYPEDYYITKDCHAVPLRWLAP  171 (269)
T ss_pred             HHHHHHHHHHHHHH--HHHHhcCEecccccHhheEecCC---CcEEEeccccccccccchheeccCCCCCcccccCH
Confidence            45778999999999  99999999999999999999885   7899999999875432211   1223455668776

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina

>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=99.37  E-value=2.5e-12  Score=77.31  Aligned_cols=69  Identities=22%  Similarity=0.374  Sum_probs=56.5

Q ss_pred             HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCcc--c--cccccccccccC
Q psy8010          14 RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDVD--V--REILGTPDYVGE   87 (87)
Q Consensus        14 ~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~~--~--~~~~gt~~y~aP   87 (87)
                      +.+..++.|++.++  .++|+.+++|+|++|.|++++.+   ..++++|||++........  .  ....|++.|+||
T Consensus       104 ~~~~~~~~~l~~~l--~~lH~~~i~H~dl~p~nilv~~~---~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aP  176 (263)
T cd06625         104 TVTRKYTRQILEGV--EYLHSNMIVHRDIKGANILRDSA---GNVKLGDFGASKRLQTICSSGTGMKSVTGTPYWMSP  176 (263)
T ss_pred             HHHHHHHHHHHHHH--HHHHhCCeecCCCCHHHEEEcCC---CCEEEeecccceeccccccccccccCCCcCccccCc
Confidence            46788999999999  99999999999999999999874   7899999999876532211  1  345678889887

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t

>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases

Probab=99.37  E-value=1.2e-12  Score=79.49  Aligned_cols=79  Identities=25%  Similarity=0.416  Sum_probs=61.0

Q ss_pred             HHHHHhhhcH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCC-ccccccccc
Q psy8010           4 FIITLVARIP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRD-VDVREILGT   81 (87)
Q Consensus         4 ~~~~~~~~~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~-~~~~~~~gt   81 (87)
                      ++......++ ..+..++.|++.++  .|+|+.+++|+|++|.|++++.+   ..++++|||++...... .......|+
T Consensus        92 ~~~~~~~~l~~~~~~~~~~ql~~~l--~~lh~~~i~h~dl~p~nili~~~---~~~~l~d~g~~~~~~~~~~~~~~~~~~  166 (280)
T cd06611          92 IMLELERGLTEPQIRYVCRQMLEAL--NFLHSHKVIHRDLKAGNILLTLD---GDVKLADFGVSAKNKSTLQKRDTFIGT  166 (280)
T ss_pred             HHHHhcCCCCHHHHHHHHHHHHHHH--HHHHHCCcccCCCChhhEEECCC---CCEEEccCccchhhcccccccceeecc
Confidence            3333334566 57889999999999  99999999999999999999875   78999999987654322 122345678


Q ss_pred             cccccC
Q psy8010          82 PDYVGE   87 (87)
Q Consensus        82 ~~y~aP   87 (87)
                      +.|+||
T Consensus       167 ~~y~~P  172 (280)
T cd06611         167 PYWMAP  172 (280)
T ss_pred             hhhcCH
Confidence            888876

Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti

>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8

Probab=99.37  E-value=2e-12  Score=77.42  Aligned_cols=72  Identities=29%  Similarity=0.440  Sum_probs=59.7

Q ss_pred             cH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCccccccccccccccC
Q psy8010          12 IP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDVDVREILGTPDYVGE   87 (87)
Q Consensus        12 ~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~~~~~~~gt~~y~aP   87 (87)
                      ++ ..+..++.|++.++  .++|+++++|+|++|.|++++.+  ...++++|||.+.............|++.|+||
T Consensus        98 ~~~~~~~~~~~~i~~~l--~~lh~~~i~h~dl~~~nil~~~~--~~~~~l~d~~~~~~~~~~~~~~~~~~~~~y~aP  170 (256)
T cd08220          98 LDEDTILHFFVQILLAL--HHVHTKLILHRDLKTQNILLDKH--KMVVKIGDFGISKILSSKSKAYTVVGTPCYISP  170 (256)
T ss_pred             CCHHHHHHHHHHHHHHH--HHHHhCCeecCCCCHHHEEEcCC--CCEEEEccCCCceecCCCccccccccCCcccCc
Confidence            44 47788999999999  99999999999999999999864  356899999999876554444456788889987

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with

>PRK13184 pknD serine/threonine-protein kinase; Reviewed

Probab=99.36  E-value=1.8e-12  Score=89.63  Aligned_cols=68  Identities=18%  Similarity=0.319  Sum_probs=55.4

Q ss_pred             HHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCc-------------------cc
Q psy8010          15 LVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDV-------------------DV   75 (87)
Q Consensus        15 ~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~-------------------~~   75 (87)
                      .+..++.|++.++  .++|+++++|+|+||+|++++..   ..++++|||++.......                   ..
T Consensus       114 ~iL~I~~QIa~AL--~yLHs~GIIHRDLKPeNILLd~d---g~vKLiDFGLAk~i~~~~~~~~~l~~~~~~s~~s~~t~~  188 (932)
T PRK13184        114 AFLSIFHKICATI--EYVHSKGVLHRDLKPDNILLGLF---GEVVILDWGAAIFKKLEEEDLLDIDVDERNICYSSMTIP  188 (932)
T ss_pred             HHHHHHHHHHHHH--HHHHHCCccccCCchheEEEcCC---CCEEEEecCcceecccccccccccccccccccccccccC
Confidence            4677889999999  99999999999999999999875   789999999998651100                   00


Q ss_pred             cccccccccccC
Q psy8010          76 REILGTPDYVGE   87 (87)
Q Consensus        76 ~~~~gt~~y~aP   87 (87)
                      ...+||+.||||
T Consensus       189 g~~vGT~~YmAP  200 (932)
T PRK13184        189 GKIVGTPDYMAP  200 (932)
T ss_pred             CCCCCCCCCCCH
Confidence            134799999998

>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase

Probab=99.36  E-value=2.6e-12  Score=77.28  Aligned_cols=72  Identities=13%  Similarity=0.227  Sum_probs=56.4

Q ss_pred             hcH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCccc----cccccccccc
Q psy8010          11 RIP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDVDV----REILGTPDYV   85 (87)
Q Consensus        11 ~~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~~~----~~~~gt~~y~   85 (87)
                      .++ +.+..++.|++.++  .++|+++++|+|++|.|+++..+   ..++++|||++..+......    ....+++.|+
T Consensus        91 ~~~~~~~~~i~~qi~~al--~~lH~~~i~H~dlkp~nill~~~---~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~  165 (257)
T cd05116          91 HVTEKNITELVHQVSMGM--KYLEETNFVHRDLAARNVLLVTQ---HYAKISDFGLSKALGADENYYKAKTHGKWPVKWY  165 (257)
T ss_pred             CCCHHHHHHHHHHHHHHH--HHHHHCCEeecccchhhEEEcCC---CeEEECCCccccccCCCCCeeeecCCCCCCcccc
Confidence            344 57888999999999  99999999999999999999874   78999999998876433221    1223356788


Q ss_pred             cC
Q psy8010          86 GE   87 (87)
Q Consensus        86 aP   87 (87)
                      ||
T Consensus       166 aP  167 (257)
T cd05116         166 AP  167 (257)
T ss_pred             CH
Confidence            76

Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio

>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2

Probab=99.36  E-value=2.5e-12  Score=80.21  Aligned_cols=70  Identities=27%  Similarity=0.611  Sum_probs=57.7

Q ss_pred             cH-HHHHHHHHHHHHHHHHHHhhhC-CceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCccccccccccccccC
Q psy8010          12 IP-RLVAKVTVTLLGSLNHHFTSTH-SLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDVDVREILGTPDYVGE   87 (87)
Q Consensus        12 ~~-~~~~~~~~q~~~~l~~~~~h~~-~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~~~~~~~gt~~y~aP   87 (87)
                      ++ ..+..++.|++.++  .|+|+. +++|+|++|.|++++.+   ..++++|||++...... ......|++.|+||
T Consensus       100 ~~~~~~~~~~~~i~~~l--~~lH~~~~ivH~dlkp~Nil~~~~---~~~kl~Dfg~~~~~~~~-~~~~~~g~~~y~aP  171 (331)
T cd06649         100 IPEEILGKVSIAVLRGL--AYLREKHQIMHRDVKPSNILVNSR---GEIKLCDFGVSGQLIDS-MANSFVGTRSYMSP  171 (331)
T ss_pred             CCHHHHHHHHHHHHHHH--HHHhhcCCEEcCCCChhhEEEcCC---CcEEEccCccccccccc-ccccCCCCcCcCCH
Confidence            44 46788999999999  999985 69999999999999885   78999999998765432 23445789999998

Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst

>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors

Probab=99.36  E-value=2.1e-12  Score=78.90  Aligned_cols=71  Identities=11%  Similarity=0.185  Sum_probs=57.1

Q ss_pred             cH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCcc---ccccccccccccC
Q psy8010          12 IP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDVD---VREILGTPDYVGE   87 (87)
Q Consensus        12 ~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~~---~~~~~gt~~y~aP   87 (87)
                      ++ +.+..++.|++.++  .++|+++++|+|++|.|++++..   ..++++|||+++.......   .....+++.|+||
T Consensus       127 ~~~~~~~~~~~~i~~al--~~LH~~~i~H~dlkp~Nili~~~---~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aP  201 (296)
T cd05051         127 LSFSTLLYMATQIASGM--RYLESLNFVHRDLATRNCLVGKN---YTIKIADFGMSRNLYSSDYYRVQGRAPLPIRWMAW  201 (296)
T ss_pred             CCHHHHHHHHHHHHHHH--HHHHHcCccccccchhceeecCC---CceEEccccceeecccCcceeecCcCCCCceecCH
Confidence            44 46788999999999  99999999999999999999985   7899999999886533221   1234566778887

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke

>KOG0603|consensus

Probab=99.36  E-value=1.4e-12  Score=86.05  Aligned_cols=68  Identities=19%  Similarity=0.312  Sum_probs=56.0

Q ss_pred             HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCccccccccccccccC
Q psy8010          14 RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDVDVREILGTPDYVGE   87 (87)
Q Consensus        14 ~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~~~~~~~gt~~y~aP   87 (87)
                      .++..+++|++.++  .++|++|++|||++|+||++...  .+.++++|||.++....+  ..+.+-|..|.||
T Consensus       415 ~e~~~w~~~lv~Av--~~LH~~gvvhRDLkp~NIL~~~~--~g~lrltyFG~a~~~~~~--~~tp~~t~~y~AP  482 (612)
T KOG0603|consen  415 SEASQWAAELVSAV--DYLHEQGVVHRDLKPGNILLDGS--AGHLRLTYFGFWSELERS--CDTPALTLQYVAP  482 (612)
T ss_pred             HHHHHHHHHHHHHH--HHHHhcCeeecCCChhheeecCC--CCcEEEEEechhhhCchh--hcccchhhcccCh
Confidence            46778999999999  99999999999999999999522  478999999998876544  4455667777776

>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1

Probab=99.36  E-value=2.4e-12  Score=78.62  Aligned_cols=71  Identities=20%  Similarity=0.287  Sum_probs=58.0

Q ss_pred             cH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCc--cccccccccccccC
Q psy8010          12 IP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDV--DVREILGTPDYVGE   87 (87)
Q Consensus        12 ~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~--~~~~~~gt~~y~aP   87 (87)
                      ++ ..+..++.|++.++  .++|+.+++|+|++|.|++++.+   ..++++|||++.......  ......|+..|+||
T Consensus       102 l~~~~~~~~~~qi~~al--~~lH~~~i~H~dl~p~nil~~~~---~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~y~aP  175 (290)
T cd05613         102 FKEQEVQIYSGEIVLAL--EHLHKLGIIYRDIKLENILLDSN---GHVVLTDFGLSKEFHEDEVERAYSFCGTIEYMAP  175 (290)
T ss_pred             CCHHHHHHHHHHHHHHH--HHHHhCCeeccCCCHHHeEECCC---CCEEEeeCccceecccccccccccccCCcccCCh
Confidence            44 57788888999999  99999999999999999999875   789999999988754322  22345788888887

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph

>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase

Probab=99.36  E-value=2.4e-12  Score=78.73  Aligned_cols=71  Identities=21%  Similarity=0.458  Sum_probs=59.2

Q ss_pred             hhcH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCccccccccccccccC
Q psy8010          10 ARIP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDVDVREILGTPDYVGE   87 (87)
Q Consensus        10 ~~~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~~~~~~~gt~~y~aP   87 (87)
                      +.++ +.+..++.|++.++  .++|+.+++|+|++|.|+++..+   ..++++|||++......  .....|++.|+||
T Consensus        96 ~~l~~~~~~~~~~qil~~l--~~lH~~~i~H~dl~p~nili~~~---~~~kl~dfg~~~~~~~~--~~~~~~~~~y~aP  167 (290)
T cd05580          96 GRFPEPVARFYAAQVVLAL--EYLHSLDIVYRDLKPENLLLDSD---GYIKITDFGFAKRVKGR--TYTLCGTPEYLAP  167 (290)
T ss_pred             CCCCHHHHHHHHHHHHHHH--HHHHHCCEecCCCCHHHEEECCC---CCEEEeeCCCccccCCC--CCCCCCCccccCh
Confidence            3455 57888899999999  99999999999999999999885   78999999998876433  3345788889887

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi

>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10

Probab=99.36  E-value=1.6e-12  Score=80.13  Aligned_cols=73  Identities=21%  Similarity=0.250  Sum_probs=58.5

Q ss_pred             hhcH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCC-ccccccccccccccC
Q psy8010          10 ARIP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRD-VDVREILGTPDYVGE   87 (87)
Q Consensus        10 ~~~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~-~~~~~~~gt~~y~aP   87 (87)
                      ..++ +.+..++.|++.++  .++|+.+++|+|++|+|++++..   ..++++|||++...... .......+++.|+||
T Consensus       103 ~~l~~~~~~~~~~qi~~~l--~~lH~~~i~H~dl~p~nil~~~~---~~~kL~dfg~~~~~~~~~~~~~~~~~~~~y~aP  177 (309)
T cd07845         103 TPFSESQVKCLMLQLLRGL--QYLHENFIIHRDLKVSNLLLTDK---GCLKIADFGLARTYGLPAKPMTPKVVTLWYRAP  177 (309)
T ss_pred             cCCCHHHHHHHHHHHHHHH--HHHHhCCeecCCCCHHHEEECCC---CCEEECccceeeecCCccCCCCcccccccccCh
Confidence            3455 57888999999999  99999999999999999999875   78999999998876433 222334557778887

Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing

>PTZ00266 NIMA-related protein kinase; Provisional

Probab=99.36  E-value=2.1e-12  Score=89.90  Aligned_cols=75  Identities=24%  Similarity=0.390  Sum_probs=59.3

Q ss_pred             hcH-HHHHHHHHHHHHHHHHHHhhhC-------CceecCCCCCceEeeeCC--------------CCCcEEEEeecccee
Q psy8010          11 RIP-RLVAKVTVTLLGSLNHHFTSTH-------SLYRSCSQPQNLVLTGEY--------------PDCDVKLCDFGISRH   68 (87)
Q Consensus        11 ~~~-~~~~~~~~q~~~~l~~~~~h~~-------~~~h~~~~~~~~l~~~~~--------------~~~~~kl~dfg~~~~   68 (87)
                      .++ ..+..++.|++.+|  .|+|..       +++|+|++|.||++....              ....++++|||++..
T Consensus       114 ~L~E~~Il~Ia~QIL~AL--aYLHs~g~~~~~k~IVHRDLKPeNILL~s~~~~lg~i~~~~~n~ng~~iVKLsDFGlAr~  191 (1021)
T PTZ00266        114 KIEEHAIVDITRQLLHAL--AYCHNLKDGPNGERVLHRDLKPQNIFLSTGIRHIGKITAQANNLNGRPIAKIGDFGLSKN  191 (1021)
T ss_pred             CCCHHHHHHHHHHHHHHH--HHHHhcccccccCCceeccCcHHHeEeecCccccccccccccccCCCCceEEccCCcccc
Confidence            456 47889999999999  999984       499999999999996421              123489999999987


Q ss_pred             cCCCccccccccccccccC
Q psy8010          69 LSRDVDVREILGTPDYVGE   87 (87)
Q Consensus        69 ~~~~~~~~~~~gt~~y~aP   87 (87)
                      +.........+||+.|+||
T Consensus       192 l~~~s~~~s~vGTp~YmAP  210 (1021)
T PTZ00266        192 IGIESMAHSCVGTPYYWSP  210 (1021)
T ss_pred             ccccccccccCCCccccCH
Confidence            6544444556899999998

>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases

Probab=99.36  E-value=1.5e-12  Score=79.49  Aligned_cols=72  Identities=24%  Similarity=0.294  Sum_probs=56.4

Q ss_pred             hcH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCC-ccccccccccccccC
Q psy8010          11 RIP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRD-VDVREILGTPDYVGE   87 (87)
Q Consensus        11 ~~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~-~~~~~~~gt~~y~aP   87 (87)
                      .++ +.+..++.|++.++  .|+|+.+++|+|++|+|++++.+   ..++++|||+++..... .......+++.|+||
T Consensus        99 ~~~~~~~~~~~~ql~~al--~~lH~~~i~H~dl~p~nil~~~~---~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~aP  172 (291)
T cd07844          99 GLSMHNVRLFLFQLLRGL--AYCHQRRVLHRDLKPQNLLISER---GELKLADFGLARAKSVPSKTYSNEVVTLWYRPP  172 (291)
T ss_pred             CCCHHHHHHHHHHHHHHH--HHHHhCCeecccCCHHHEEEcCC---CCEEECccccccccCCCCccccccccccccCCc
Confidence            344 57889999999999  99999999999999999999885   67999999988754211 122233566778776

Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the

>KOG1027|consensus

Probab=99.36  E-value=1.7e-12  Score=88.02  Aligned_cols=71  Identities=18%  Similarity=0.258  Sum_probs=59.3

Q ss_pred             HHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCC--CCcEEEEeeccceecCCCcc----ccccccccccccC
Q psy8010          15 LVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYP--DCDVKLCDFGISRHLSRDVD----VREILGTPDYVGE   87 (87)
Q Consensus        15 ~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~--~~~~kl~dfg~~~~~~~~~~----~~~~~gt~~y~aP   87 (87)
                      ....+..|+..|+  .++|+.+++|||+||+||++...+.  ....+++|||+++++..+..    .....||-+|+||
T Consensus       607 ~~~~~l~q~~~Gl--aHLHsl~iVHRDLkPQNILI~~~~~~~~~ra~iSDfglsKkl~~~~sS~~r~s~~sGt~GW~AP  683 (903)
T KOG1027|consen  607 DPISVLSQIASGL--AHLHSLKIVHRDLKPQNILISVPSADGTLRAKISDFGLSKKLAGGKSSFSRLSGGSGTSGWQAP  683 (903)
T ss_pred             cHHHHHHHHHHHH--HHHHhcccccccCCCceEEEEccCCCcceeEEecccccccccCCCcchhhcccCCCCcccccCH
Confidence            3577889999999  9999999999999999999998521  34589999999999865543    3567899999998

>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9

Probab=99.35  E-value=1.6e-12  Score=79.73  Aligned_cols=72  Identities=22%  Similarity=0.295  Sum_probs=58.3

Q ss_pred             hcH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCc-----ccccccccccc
Q psy8010          11 RIP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDV-----DVREILGTPDY   84 (87)
Q Consensus        11 ~~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~-----~~~~~~gt~~y   84 (87)
                      .++ +++..++.|++.++  .++|+++++|+|++|+|++++.+   ..++++|||++..+....     ......++..|
T Consensus       115 ~~~~~~~~~i~~qi~~al--~~lH~~~i~H~dl~p~nil~~~~---~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~y  189 (310)
T cd07865         115 KFTLSEIKKVMKMLLNGL--YYIHRNKILHRDMKAANILITKD---GILKLADFGLARAFSLSKNSKPNRYTNRVVTLWY  189 (310)
T ss_pred             CCCHHHHHHHHHHHHHHH--HHHHHCCeeccCCCHHHEEECCC---CcEEECcCCCcccccCCcccCCCCccCcccCccc
Confidence            345 57899999999999  99999999999999999999875   789999999987653221     11234677888


Q ss_pred             ccC
Q psy8010          85 VGE   87 (87)
Q Consensus        85 ~aP   87 (87)
                      +||
T Consensus       190 ~aP  192 (310)
T cd07865         190 RPP  192 (310)
T ss_pred             cCc
Confidence            887

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl

>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2

Probab=99.35  E-value=2.8e-12  Score=78.89  Aligned_cols=69  Identities=12%  Similarity=0.184  Sum_probs=55.2

Q ss_pred             HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCcc---ccccccccccccC
Q psy8010          14 RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDVD---VREILGTPDYVGE   87 (87)
Q Consensus        14 ~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~~---~~~~~gt~~y~aP   87 (87)
                      ..+..++.|++.++  .|+|+.+++|+|++|.|++++.+   ..++++|||++..+.....   .....+++.|+||
T Consensus       137 ~~~~~~~~qi~~al--~~LH~~givH~dlkp~Nili~~~---~~~kl~D~g~~~~~~~~~~~~~~~~~~~~~~y~aP  208 (304)
T cd05101         137 KDLVSCTYQVARGM--EYLASQKCIHRDLAARNVLVTEN---NVMKIADFGLARDVNNIDYYKKTTNGRLPVKWMAP  208 (304)
T ss_pred             HHHHHHHHHHHHHH--HHHHHCCeeecccccceEEEcCC---CcEEECCCccceecccccccccccCCCCCceeeCc
Confidence            45788899999999  99999999999999999999874   7899999999987643221   1223456678887

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>KOG1187|consensus

Probab=99.35  E-value=1.2e-12  Score=83.04  Aligned_cols=69  Identities=20%  Similarity=0.356  Sum_probs=56.3

Q ss_pred             HHHHHHHHHHHHHHHHHHhhhCC---ceecCCCCCceEeeeCCCCCcEEEEeeccceecCC-Ccccccc-ccccccccC
Q psy8010          14 RLVAKVTVTLLGSLNHHFTSTHS---LYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSR-DVDVREI-LGTPDYVGE   87 (87)
Q Consensus        14 ~~~~~~~~q~~~~l~~~~~h~~~---~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~-~~~~~~~-~gt~~y~aP   87 (87)
                      +.-.+++.+++.|+  .|+|...   ++|||+|+.||+++.+   ...|++|||+|+.... .....+. .||..|++|
T Consensus       174 ~~R~kIa~g~A~gL--~yLH~~~~~~iiHrDiKssNILLD~~---~~aKlsDFGLa~~~~~~~~~~~~~~~gt~gY~~P  247 (361)
T KOG1187|consen  174 ETRLKIALGAARGL--AYLHEGCPPPIIHRDIKSSNILLDED---FNAKLSDFGLAKLGPEGDTSVSTTVMGTFGYLAP  247 (361)
T ss_pred             HHHHHHHHHHHHHH--HHHccCCCCCEecCCCCHHHeeECCC---CCEEccCccCcccCCccccceeeecCCCCccCCh
Confidence            45678888999999  9999843   9999999999999975   8899999999966544 3333343 899999998

>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5

Probab=99.35  E-value=2.2e-12  Score=78.58  Aligned_cols=71  Identities=25%  Similarity=0.570  Sum_probs=59.0

Q ss_pred             hcH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCccccccccccccccC
Q psy8010          11 RIP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDVDVREILGTPDYVGE   87 (87)
Q Consensus        11 ~~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~~~~~~~gt~~y~aP   87 (87)
                      .++ ..+..++.|++.++  .|+|+.+++|+|++|.|++++.+   ..++++|||++..+... .....+|++.|+||
T Consensus        91 ~~~~~~~~~~~~qi~~~l--~~lH~~~i~H~dlkp~Nill~~~---~~~~l~dfg~~~~~~~~-~~~~~~~~~~y~aP  162 (279)
T cd06619          91 KIPEHVLGRIAVAVVKGL--TYLWSLKILHRDVKPSNMLVNTR---GQVKLCDFGVSTQLVNS-IAKTYVGTNAYMAP  162 (279)
T ss_pred             cCCHHHHHHHHHHHHHHH--HHHHHCCEeeCCCCHHHEEECCC---CCEEEeeCCcceecccc-cccCCCCChhhcCc
Confidence            344 46788999999999  99999999999999999999885   78999999998765432 23445888899987

Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p

>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases

Probab=99.35  E-value=1.6e-12  Score=81.10  Aligned_cols=71  Identities=24%  Similarity=0.471  Sum_probs=58.5

Q ss_pred             cH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCc----ccccccccccccc
Q psy8010          12 IP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDV----DVREILGTPDYVG   86 (87)
Q Consensus        12 ~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~----~~~~~~gt~~y~a   86 (87)
                      ++ +.+..++.|++.++  .++|+.+++|+|++|.|++++..   ..++++|||++.......    ......|++.|+|
T Consensus       103 l~~~~~~~i~~ql~~aL--~~LH~~~ivH~dlkp~Nill~~~---~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~a  177 (336)
T cd07849         103 LSNDHIQYFLYQILRGL--KYIHSANVLHRDLKPSNLLLNTN---CDLKICDFGLARIADPEHDHTGFLTEYVATRWYRA  177 (336)
T ss_pred             CCHHHHHHHHHHHHHHH--HHHHhCCeeccCCCHHHEEECCC---CCEEECcccceeeccccccccCCcCCcCcCCCccC
Confidence            44 47888999999999  99999999999999999999884   789999999987653222    1134578899998


Q ss_pred             C
Q psy8010          87 E   87 (87)
Q Consensus        87 P   87 (87)
                      |
T Consensus       178 P  178 (336)
T cd07849         178 P  178 (336)
T ss_pred             h
Confidence            8

Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase

>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron

Probab=99.35  E-value=2.1e-12  Score=77.66  Aligned_cols=69  Identities=12%  Similarity=0.210  Sum_probs=54.1

Q ss_pred             HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCc-----cccccccccccccC
Q psy8010          14 RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDV-----DVREILGTPDYVGE   87 (87)
Q Consensus        14 ~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~-----~~~~~~gt~~y~aP   87 (87)
                      .....++.|++.++  .|+|..+++|+|++|.|++++.+   ..++++|||+++.+....     ......+++.|+||
T Consensus        98 ~~~~~~~~~i~~~l--~~lH~~~i~H~dlk~~nili~~~---~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~y~aP  171 (262)
T cd05058          98 KDLIGFGLQVAKGM--EYLASKKFVHRDLAARNCMLDES---FTVKVADFGLARDIYDKEYYSVHNHTGAKLPVKWMAL  171 (262)
T ss_pred             HHHHHHHHHHHHHH--HHHHhCCccccccCcceEEEcCC---CcEEECCccccccccCCcceeecccccCcCCccccCh
Confidence            45678889999999  99999999999999999999875   689999999987653221     11233456678876

Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca

>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin

Probab=99.35  E-value=3.3e-12  Score=77.72  Aligned_cols=71  Identities=25%  Similarity=0.357  Sum_probs=58.3

Q ss_pred             cH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCc-cccccccccccccC
Q psy8010          12 IP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDV-DVREILGTPDYVGE   87 (87)
Q Consensus        12 ~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~-~~~~~~gt~~y~aP   87 (87)
                      ++ +.+..++.|++.++  .++|+.+++|+|++|.|+++...   ..++++|||++..+.... ......|++.|+||
T Consensus       121 ~~~~~~~~~~~~i~~~l--~~lH~~~i~H~dlkp~nili~~~---~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aP  193 (286)
T cd06638         121 MEEPIIAYILHEALMGL--QHLHVNKTIHRDVKGNNILLTTE---GGVKLVDFGVSAQLTSTRLRRNTSVGTPFWMAP  193 (286)
T ss_pred             ccHHHHHHHHHHHHHHH--HHHHhCCccccCCCHHhEEECCC---CCEEEccCCceeecccCCCccccccCCCcccCh
Confidence            44 46788999999999  99999999999999999999985   679999999988764322 22345788889987

Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear

>smart00219 TyrKc Tyrosine kinase, catalytic domain

Probab=99.35  E-value=3.8e-12  Score=76.11  Aligned_cols=71  Identities=14%  Similarity=0.205  Sum_probs=56.9

Q ss_pred             cH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCcccc--ccccccccccC
Q psy8010          12 IP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDVDVR--EILGTPDYVGE   87 (87)
Q Consensus        12 ~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~~~~--~~~gt~~y~aP   87 (87)
                      ++ ..+..++.|++.++  .++|+.+++|+|++|.|++++..   ..++++|||++..........  ...+++.|+||
T Consensus       100 ~~~~~~~~~~~ql~~~l--~~lh~~~~~h~dl~~~nil~~~~---~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~~P  173 (258)
T smart00219      100 LSLSDLLSFALQIARGM--EYLESKNFIHRDLAARNCLVGEN---LVVKISDFGLSRDLYDDDYYKKKGGKLPIRWMAP  173 (258)
T ss_pred             CCHHHHHHHHHHHHHHH--HHHhcCCeeecccccceEEEccC---CeEEEcccCCceecccccccccccCCCcccccCh
Confidence            55 57889999999999  99999999999999999999885   689999999988764432221  12356778876

Phosphotransferases. Tyrosine-specific kinase subfamily.

>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors

Probab=99.35  E-value=2.5e-12  Score=78.18  Aligned_cols=69  Identities=16%  Similarity=0.252  Sum_probs=56.3

Q ss_pred             HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCcc---ccccccccccccC
Q psy8010          14 RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDVD---VREILGTPDYVGE   87 (87)
Q Consensus        14 ~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~~---~~~~~gt~~y~aP   87 (87)
                      ..+..++.|++.++  .++|..+++|+|++|+|++++.+   ..++++|||++........   .....+++.|+||
T Consensus       124 ~~~~~~~~~l~~al--~~lH~~~i~H~dlkp~Nil~~~~---~~~~L~dfg~~~~~~~~~~~~~~~~~~~~~~y~aP  195 (283)
T cd05048         124 SDFLHIAIQIAAGM--EYLSSHHFVHRDLAARNCLVGEG---LTVKISDFGLSRDIYSADYYRVQSKSLLPVRWMPP  195 (283)
T ss_pred             HHHHHHHHHHHHHH--HHHHhCCeeccccccceEEEcCC---CcEEECCCcceeeccccccccccCCCcccccccCH
Confidence            46778999999999  99999999999999999999874   7899999999886533221   2334667789887

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer

>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl

Probab=99.35  E-value=1.8e-12  Score=78.31  Aligned_cols=69  Identities=16%  Similarity=0.272  Sum_probs=54.2

Q ss_pred             HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCccc---cccccccccccC
Q psy8010          14 RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDVDV---REILGTPDYVGE   87 (87)
Q Consensus        14 ~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~~~---~~~~gt~~y~aP   87 (87)
                      +.+..++.|++.++  .|+|.++++|+|++|+|++++.+   ..++++|||++..+......   ....+++.|++|
T Consensus       112 ~~~~~~~~~i~~~l--~~lH~~~i~H~dlkp~Nil~~~~---~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~p  183 (272)
T cd05075         112 QMLVKFMTDIASGM--EYLSSKSFIHRDLAARNCMLNEN---MNVCVADFGLSKKIYNGDYYRQGRIAKMPVKWIAI  183 (272)
T ss_pred             HHHHHHHHHHHHHH--HHHHHCCeeccccchhheEEcCC---CCEEECCCCcccccCcccceecCCcccCCcccCCH
Confidence            46888999999999  99999999999999999999874   78999999998876433211   122345566665

Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor

>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7

Probab=99.35  E-value=2.3e-12  Score=78.90  Aligned_cols=72  Identities=18%  Similarity=0.297  Sum_probs=58.0

Q ss_pred             hcH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCC-ccccccccccccccC
Q psy8010          11 RIP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRD-VDVREILGTPDYVGE   87 (87)
Q Consensus        11 ~~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~-~~~~~~~gt~~y~aP   87 (87)
                      .++ +.+..++.|++.++  .++|+++++|+|++|.|++++.+   ..++++|||++...... .......+++.|+||
T Consensus        98 ~~~~~~~~~~~~qi~~al--~~lH~~~i~H~dl~p~nill~~~---~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~aP  171 (298)
T cd07841          98 VLTPADIKSYMLMTLRGL--EYLHSNWILHRDLKPNNLLIASD---GVLKLADFGLARSFGSPNRKMTHQVVTRWYRAP  171 (298)
T ss_pred             CCCHHHHHHHHHHHHHHH--HHHHhCCeeecCCChhhEEEcCC---CCEEEccceeeeeccCCCccccccccceeeeCH
Confidence            355 57888999999999  99999999999999999999985   78999999998876433 222334567778776

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is

>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase

Probab=99.35  E-value=2.9e-12  Score=77.15  Aligned_cols=71  Identities=23%  Similarity=0.379  Sum_probs=59.3

Q ss_pred             cH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCccccccccccccccC
Q psy8010          12 IP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDVDVREILGTPDYVGE   87 (87)
Q Consensus        12 ~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~~~~~~~gt~~y~aP   87 (87)
                      ++ +.+..++.|++.++  .++|+.+++|+|++|.|++++.+   ..++++|||++.............|++.|++|
T Consensus        90 l~~~~~~~~~~~i~~~l--~~lH~~~~~h~dl~~~nilv~~~---~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~P  161 (262)
T cd05572          90 FDEYTARFYIACVVLAF--EYLHNRGIIYRDLKPENLLLDSN---GYVKLVDFGFAKKLKSGQKTWTFCGTPEYVAP  161 (262)
T ss_pred             CCHHHHHHHHHHHHHHH--HHHhhCCcccCCCCHHHEEEcCC---CCEEEeeCCcccccCcccccccccCCcCccCh
Confidence            44 57888899999999  99999999999999999999885   78999999998876544333445788888887

Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi

>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases

Probab=99.35  E-value=4.6e-12  Score=76.92  Aligned_cols=72  Identities=21%  Similarity=0.414  Sum_probs=60.6

Q ss_pred             hcH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCccccccccccccccC
Q psy8010          11 RIP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDVDVREILGTPDYVGE   87 (87)
Q Consensus        11 ~~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~~~~~~~gt~~y~aP   87 (87)
                      .++ ..+..++.|++.++  .++|+++++|+|++|.|++++..   ..++++|||++.............|+..|+||
T Consensus        95 ~~~~~~~~~~~~~l~~~l--~~Lh~~~i~H~dl~~~ni~i~~~---~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~aP  167 (283)
T cd07830          95 PFSESVIRSIIYQILQGL--AHIHKHGFFHRDLKPENLLVSGP---EVVKIADFGLAREIRSRPPYTDYVSTRWYRAP  167 (283)
T ss_pred             cCCHHHHHHHHHHHHHHH--HHHHHCCcccCCCChhhEEEcCC---CCEEEeecccceeccCCCCcCCCCCcccccCc
Confidence            344 57889999999999  99999999999999999999984   78999999998876554444556788888887

Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili

>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=99.35  E-value=2.8e-12  Score=78.16  Aligned_cols=71  Identities=15%  Similarity=0.299  Sum_probs=56.4

Q ss_pred             cH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCcc----cccccccccccc
Q psy8010          12 IP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDVD----VREILGTPDYVG   86 (87)
Q Consensus        12 ~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~~----~~~~~gt~~y~a   86 (87)
                      ++ ..+..++.|++.++  .++|+.+++|+|++|.|++++.+   ..++++|||++..+.....    .....|+..|+|
T Consensus       106 ~~~~~~~~i~~~i~~aL--~~lH~~gi~H~dlkp~Nil~~~~---~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~a  180 (284)
T cd05079         106 INLKQQLKYAVQICKGM--DYLGSRQYVHRDLAARNVLVESE---HQVKIGDFGLTKAIETDKEYYTVKDDLDSPVFWYA  180 (284)
T ss_pred             CCHHHHHHHHHHHHHHH--HHHHHCCeeecccchheEEEcCC---CCEEECCCccccccccCccceeecCCCCCCccccC
Confidence            44 57888999999999  99999999999999999999874   7899999999886643221    123455666777


Q ss_pred             C
Q psy8010          87 E   87 (87)
Q Consensus        87 P   87 (87)
                      |
T Consensus       181 p  181 (284)
T cd05079         181 P  181 (284)
T ss_pred             H
Confidence            6

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a

>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase

Probab=99.34  E-value=1.9e-12  Score=78.24  Aligned_cols=71  Identities=30%  Similarity=0.495  Sum_probs=58.5

Q ss_pred             cH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCc-cccccccccccccC
Q psy8010          12 IP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDV-DVREILGTPDYVGE   87 (87)
Q Consensus        12 ~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~-~~~~~~gt~~y~aP   87 (87)
                      ++ +.+..++.|++.++  .|+|+++++|+|++|.|++++.+   ..++++|||++....... ......|++.|+||
T Consensus       108 l~~~~~~~~~~qi~~~l--~~LH~~~ivh~dl~~~nili~~~---~~~~l~Dfg~~~~~~~~~~~~~~~~g~~~y~aP  180 (272)
T cd06637         108 LKEEWIAYICREILRGL--SHLHQHKVIHRDIKGQNVLLTEN---AEVKLVDFGVSAQLDRTVGRRNTFIGTPYWMAP  180 (272)
T ss_pred             CCHHHHHHHHHHHHHHH--HHHHHCCCccCCCCHHHEEECCC---CCEEEccCCCceecccccccCCcccccccccCH
Confidence            44 46788999999999  99999999999999999999985   789999999987653322 23456788889887

Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ

>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5

Probab=99.34  E-value=2.8e-12  Score=77.36  Aligned_cols=72  Identities=24%  Similarity=0.421  Sum_probs=58.6

Q ss_pred             hcH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCc-cccccccccccccC
Q psy8010          11 RIP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDV-DVREILGTPDYVGE   87 (87)
Q Consensus        11 ~~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~-~~~~~~gt~~y~aP   87 (87)
                      .++ ..+..++.|++.++  .++|+.+++|+|++|.|++++.+   ..++++|||++..+.... ......|++.|+||
T Consensus       102 ~~~~~~~~~~~~qi~~~l--~~lH~~~i~H~dl~p~nill~~~---~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~~P  175 (267)
T cd06646         102 PLSELQIAYVCRETLQGL--AYLHSKGKMHRDIKGANILLTDN---GDVKLADFGVAAKITATIAKRKSFIGTPYWMAP  175 (267)
T ss_pred             CCCHHHHHHHHHHHHHHH--HHHHHCCccccCCCHHHEEECCC---CCEEECcCccceeecccccccCccccCccccCH
Confidence            344 47888899999999  99999999999999999999874   679999999988764322 22345788888887

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1

Probab=99.34  E-value=2.8e-12  Score=78.77  Aligned_cols=50  Identities=16%  Similarity=0.327  Sum_probs=45.6

Q ss_pred             HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeecccee
Q psy8010          14 RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRH   68 (87)
Q Consensus        14 ~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~   68 (87)
                      ..+..++.|++.++  .++|+.+++|+|++|.|++++.+   ..++++|||++..
T Consensus       119 ~~~~~i~~qi~~al--~~lH~~~ivH~dlkp~Nill~~~---~~~kl~dfg~~~~  168 (297)
T cd05089         119 QQLLQFASDVATGM--QYLSEKQFIHRDLAARNVLVGEN---LASKIADFGLSRG  168 (297)
T ss_pred             HHHHHHHHHHHHHH--HHHHHCCcccCcCCcceEEECCC---CeEEECCcCCCcc
Confidence            46788999999999  99999999999999999999874   7899999998864

Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.

>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase

Probab=99.34  E-value=4.9e-12  Score=77.29  Aligned_cols=72  Identities=21%  Similarity=0.313  Sum_probs=57.5

Q ss_pred             cH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCC-ccccccccccccccC
Q psy8010          12 IP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRD-VDVREILGTPDYVGE   87 (87)
Q Consensus        12 ~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~-~~~~~~~gt~~y~aP   87 (87)
                      ++ +.+..++.|++.++  .|+|+.+++|+|++|.|++++..  +..++++|||++..+... .......+++.|+||
T Consensus       107 ~~~~~~~~~~~qi~~~L--~~LH~~~i~H~dl~~~nil~~~~--~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~aP  180 (295)
T cd07837         107 LPAKTIKSFMYQLLKGV--AHCHKHGVMHRDLKPQNLLVDKQ--KGLLKIADLGLGRAFSIPVKSYTHEIVTLWYRAP  180 (295)
T ss_pred             CCHHHHHHHHHHHHHHH--HHHHHCCeeecCCChHHEEEecC--CCeEEEeecccceecCCCccccCCcccccCCCCh
Confidence            44 57889999999999  99999999999999999999873  368999999998865322 222334567778876

Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm

>KOG1152|consensus

Probab=99.34  E-value=1.4e-12  Score=86.08  Aligned_cols=68  Identities=16%  Similarity=0.224  Sum_probs=59.8

Q ss_pred             HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCccccccccccccccC
Q psy8010          14 RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDVDVREILGTPDYVGE   87 (87)
Q Consensus        14 ~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~~~~~~~gt~~y~aP   87 (87)
                      .+++.++.|++.++  .+||++||+|||+|-+|+.+..+   +-+|++|||-+..... .....++||..|.||
T Consensus       670 ~eAk~IFkQV~agi--~hlh~~~ivhrdikdenvivd~~---g~~klidfgsaa~~ks-gpfd~f~gtv~~aap  737 (772)
T KOG1152|consen  670 PEAKLIFKQVVAGI--KHLHDQGIVHRDIKDENVIVDSN---GFVKLIDFGSAAYTKS-GPFDVFVGTVDYAAP  737 (772)
T ss_pred             HHHHHHHHHHHhcc--ccccccCceecccccccEEEecC---CeEEEeeccchhhhcC-CCcceeeeeccccch
Confidence            38999999999999  99999999999999999999995   8999999998765433 355678999999988

>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases

Probab=99.34  E-value=2.8e-12  Score=77.30  Aligned_cols=72  Identities=26%  Similarity=0.459  Sum_probs=58.6

Q ss_pred             hcH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCc-cccccccccccccC
Q psy8010          11 RIP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDV-DVREILGTPDYVGE   87 (87)
Q Consensus        11 ~~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~-~~~~~~gt~~y~aP   87 (87)
                      .++ +.+..++.|++.++  .++|+.+++|+|++|.|++++.+   ..++++|||++....... ......|++.|+||
T Consensus       109 ~~~~~~~~~~~~ql~~al--~~lH~~~i~H~~l~p~ni~~~~~---~~~~l~d~~~~~~~~~~~~~~~~~~~~~~y~aP  182 (275)
T cd06608         109 RLKEEWIAYILRETLRGL--AYLHENKVIHRDIKGQNILLTKN---AEVKLVDFGVSAQLDSTLGRRNTFIGTPYWMAP  182 (275)
T ss_pred             CCCHHHHHHHHHHHHHHH--HHHhcCCcccCCCCHHHEEEccC---CeEEECCCccceecccchhhhcCccccccccCH
Confidence            445 57889999999999  99999999999999999999885   789999999887653222 22345788888887

Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I

>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase

Probab=99.34  E-value=3.3e-12  Score=76.73  Aligned_cols=67  Identities=10%  Similarity=0.216  Sum_probs=53.8

Q ss_pred             HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCccccccccccccccC
Q psy8010          14 RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDVDVREILGTPDYVGE   87 (87)
Q Consensus        14 ~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~~~~~~~gt~~y~aP   87 (87)
                      +.+..++.|++.++  .++|+++++|+|++|.|++++.+   ..++++|||++.......  ....++..|+||
T Consensus       102 ~~~~~~~~~i~~~l--~~lH~~~i~H~dlkp~nil~~~~---~~~kl~dfg~~~~~~~~~--~~~~~~~~y~aP  168 (256)
T cd05082         102 DCLLKFSLDVCEAM--EYLEANNFVHRDLAARNVLVSED---NVAKVSDFGLTKEASSTQ--DTGKLPVKWTAP  168 (256)
T ss_pred             HHHHHHHHHHHHHH--HHHHhCCEeccccchheEEEcCC---CcEEecCCccceeccccC--CCCccceeecCH
Confidence            46788999999999  99999999999999999999875   789999999987643221  222344567776

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re

>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4

Probab=99.34  E-value=3.7e-12  Score=77.39  Aligned_cols=72  Identities=28%  Similarity=0.521  Sum_probs=58.8

Q ss_pred             hcH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCc-cccccccccccccC
Q psy8010          11 RIP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDV-DVREILGTPDYVGE   87 (87)
Q Consensus        11 ~~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~-~~~~~~gt~~y~aP   87 (87)
                      .++ +.+..++.|++.++  .++|+.+++|+|++|.|++++.+   ..++++|||++....... ......++..|+||
T Consensus        96 ~~~~~~~~~~~~ql~~~l--~~LH~~~i~H~dl~p~nil~~~~---~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~aP  169 (286)
T cd07847          96 GVPEHLIKKIIWQTLQAV--NFCHKHNCIHRDVKPENILITKQ---GQIKLCDFGFARILTGPGDDYTDYVATRWYRAP  169 (286)
T ss_pred             CCCHHHHHHHHHHHHHHH--HHHHHCCceecCCChhhEEEcCC---CcEEECccccceecCCCcccccCcccccccCCH
Confidence            345 57899999999999  99999999999999999999875   689999999988764433 23345677778776

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio

>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases

Probab=99.34  E-value=2.8e-12  Score=77.15  Aligned_cols=55  Identities=13%  Similarity=0.296  Sum_probs=48.5

Q ss_pred             hcH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecC
Q psy8010          11 RIP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLS   70 (87)
Q Consensus        11 ~~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~   70 (87)
                      .++ +.+..++.|++.++  .++|+.+++|+|++|.|+++..+   ..++++|||+++...
T Consensus        96 ~~~~~~~~~i~~qi~~~l--~~lH~~~i~H~dl~p~ni~i~~~---~~~kl~dfg~~~~~~  151 (256)
T cd05059          96 KLGTEWLLDMCSDVCEAM--EYLESNGFIHRDLAARNCLVGED---NVVKVSDFGLARYVL  151 (256)
T ss_pred             CCCHHHHHHHHHHHHHHH--HHHHHCCcccccccHhhEEECCC---CcEEECCcccceecc
Confidence            445 46788999999999  99999999999999999999874   789999999987654

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows

>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6

Probab=99.34  E-value=2.6e-12  Score=77.98  Aligned_cols=71  Identities=30%  Similarity=0.543  Sum_probs=57.8

Q ss_pred             cH-HHHHHHHHHHHHHHHHHHhhhC-CceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCccccccccccccccC
Q psy8010          12 IP-RLVAKVTVTLLGSLNHHFTSTH-SLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDVDVREILGTPDYVGE   87 (87)
Q Consensus        12 ~~-~~~~~~~~q~~~~l~~~~~h~~-~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~~~~~~~gt~~y~aP   87 (87)
                      ++ +.+..++.|++.++  .|+|++ +++|+|++|+|++++.+   ..++++|||++.............|+..|+||
T Consensus       100 ~~~~~~~~~~~qi~~~l--~~lH~~~~i~h~dlkp~nil~~~~---~~~kl~dfg~~~~~~~~~~~~~~~~~~~y~aP  172 (283)
T cd06617         100 IPEDILGKIAVSIVKAL--EYLHSKLSVIHRDVKPSNVLINRN---GQVKLCDFGISGYLVDSVAKTIDAGCKPYMAP  172 (283)
T ss_pred             CCHHHHHHHHHHHHHHH--HHHhhcCCeecCCCCHHHEEECCC---CCEEEeecccccccccccccccccCCccccCh
Confidence            45 47889999999999  999997 99999999999999875   78999999998865433333335677888877

Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs

>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3

Probab=99.34  E-value=3.8e-12  Score=76.37  Aligned_cols=71  Identities=25%  Similarity=0.331  Sum_probs=58.4

Q ss_pred             cH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCc-cccccccccccccC
Q psy8010          12 IP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDV-DVREILGTPDYVGE   87 (87)
Q Consensus        12 ~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~-~~~~~~gt~~y~aP   87 (87)
                      ++ +.+..++.|++.++  .++|+++++|+|++|.|++++.+   ..++++|||.+....... ......|++.|+||
T Consensus        97 ~~~~~~~~~~~~i~~al--~~lH~~~i~H~dl~p~nili~~~---~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~aP  169 (255)
T cd08219          97 FPEDTILQWFVQMCLGV--QHIHEKRVLHRDIKSKNIFLTQN---GKVKLGDFGSARLLTSPGAYACTYVGTPYYVPP  169 (255)
T ss_pred             CCHHHHHHHHHHHHHHH--HHHhhCCcccCCCCcceEEECCC---CcEEEcccCcceeecccccccccccCCccccCH
Confidence            44 57888899999999  99999999999999999999874   789999999988664322 22446788889887

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati

>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=99.34  E-value=3e-12  Score=77.93  Aligned_cols=56  Identities=18%  Similarity=0.360  Sum_probs=49.0

Q ss_pred             hcH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCC
Q psy8010          11 RIP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSR   71 (87)
Q Consensus        11 ~~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~   71 (87)
                      .++ +.+..++.|++.++  .++|..+++|+|++|.|++++.+   ..++++|||++..+..
T Consensus       104 ~l~~~~~~~~~~~l~~aL--~~LH~~~i~H~dlkp~nili~~~---~~~~l~dfg~~~~~~~  160 (284)
T cd05081         104 RLDHRKLLLYASQICKGM--EYLGSKRYVHRDLATRNILVESE---NRVKIGDFGLTKVLPQ  160 (284)
T ss_pred             CCCHHHHHHHHHHHHHHH--HHHHHCCceeccCCHhhEEECCC---CeEEECCCcccccccC
Confidence            345 57788999999999  99999999999999999999874   7899999999887643

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th

>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases

Probab=99.33  E-value=4.1e-12  Score=77.24  Aligned_cols=71  Identities=24%  Similarity=0.462  Sum_probs=59.6

Q ss_pred             cH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCc--cccccccccccccC
Q psy8010          12 IP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDV--DVREILGTPDYVGE   87 (87)
Q Consensus        12 ~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~--~~~~~~gt~~y~aP   87 (87)
                      ++ +++..++.|++.++  .++|..+++|+|++|.|++++.+   ..++++|||++.......  ......+++.|+||
T Consensus        97 ~~~~~~~~~~~~i~~~l--~~LH~~~i~H~dl~~~ni~~~~~---~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~~~P  170 (288)
T cd07833          97 LPPDAVRSYIWQLLQAI--AYCHSHNIIHRDIKPENILVSES---GVLKLCDFGFARALRARPASPLTDYVATRWYRAP  170 (288)
T ss_pred             CCHHHHHHHHHHHHHHH--HHHHHCCeecCCCCHHHeEECCC---CCEEEEeeecccccCCCccccccCcccccCCcCC
Confidence            44 57888999999999  99999999999999999999984   789999999988764433  33456788889987

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning

>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5

Probab=99.33  E-value=2.1e-12  Score=79.34  Aligned_cols=69  Identities=23%  Similarity=0.517  Sum_probs=57.4

Q ss_pred             HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCc-cccccccccccccC
Q psy8010          14 RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDV-DVREILGTPDYVGE   87 (87)
Q Consensus        14 ~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~-~~~~~~gt~~y~aP   87 (87)
                      +.+..++.|++.++  .++|+++++|+|++|.|++++.+   ..++++|||++....... ......|++.|+||
T Consensus       118 ~~~~~~~~qi~~~l--~~LH~~~ivH~dlkp~Nill~~~---~~~kL~dfg~~~~~~~~~~~~~~~~~~~~y~aP  187 (292)
T cd06658         118 EQIATVCLSVLRAL--SYLHNQGVIHRDIKSDSILLTSD---GRIKLSDFGFCAQVSKEVPKRKSLVGTPYWMAP  187 (292)
T ss_pred             HHHHHHHHHHHHHH--HHHHHCCEeecCCCHHHEEEcCC---CCEEEccCcchhhcccccccCceeecCccccCH
Confidence            57889999999999  99999999999999999999875   689999999987553222 22446788889987

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express

>PLN03224 probable serine/threonine protein kinase; Provisional

Probab=99.33  E-value=3.9e-12  Score=83.69  Aligned_cols=68  Identities=21%  Similarity=0.327  Sum_probs=55.4

Q ss_pred             HHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCccccc--cccccccccC
Q psy8010          15 LVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDVDVRE--ILGTPDYVGE   87 (87)
Q Consensus        15 ~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~~~~~--~~gt~~y~aP   87 (87)
                      .+..++.|++.++  .|+|+.+++|+|+||.|++++.+   ..++++|||++..+..+.....  ..+++.|+||
T Consensus       310 ~~~~i~~ql~~aL--~~lH~~~ivHrDLKp~NILl~~~---~~~kL~DFGla~~~~~~~~~~~~~g~~tp~Y~aP  379 (507)
T PLN03224        310 VIKGVMRQVLTGL--RKLHRIGIVHRDIKPENLLVTVD---GQVKIIDFGAAVDMCTGINFNPLYGMLDPRYSPP  379 (507)
T ss_pred             HHHHHHHHHHHHH--HHHHHCCeecCCCchHhEEECCC---CcEEEEeCcCccccccCCccCccccCCCcceeCh
Confidence            5778899999999  99999999999999999999885   6899999999876543332222  2447889887

>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases

Probab=99.33  E-value=5.4e-12  Score=76.60  Aligned_cols=71  Identities=25%  Similarity=0.468  Sum_probs=59.3

Q ss_pred             cH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCccccccccccccccC
Q psy8010          12 IP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDVDVREILGTPDYVGE   87 (87)
Q Consensus        12 ~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~~~~~~~gt~~y~aP   87 (87)
                      ++ +.+..++.|++.++  .++|+.+++|+|++|.|++++.+   ..++++|||++.............+++.|+||
T Consensus       104 l~~~~~~~~~~~i~~al--~~LH~~~i~h~~l~~~nili~~~---~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~P  175 (287)
T cd07838         104 LPPETIKDLMRQLLRGV--DFLHSHRIVHRDLKPQNILVTSD---GQVKIADFGLARIYSFEMALTSVVVTLWYRAP  175 (287)
T ss_pred             CCHHHHHHHHHHHHHHH--HHHHHCCeeeccCChhhEEEccC---CCEEEeccCcceeccCCcccccccccccccCh
Confidence            45 57888999999999  99999999999999999999985   78999999998876544443445677788877

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both

>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants

Probab=99.33  E-value=2.5e-12  Score=80.36  Aligned_cols=72  Identities=26%  Similarity=0.451  Sum_probs=59.5

Q ss_pred             hcH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCC-ccccccccccccccC
Q psy8010          11 RIP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRD-VDVREILGTPDYVGE   87 (87)
Q Consensus        11 ~~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~-~~~~~~~gt~~y~aP   87 (87)
                      .++ +.+..++.|++.++  .++|+.+++|+|++|.|++++.+   ..++++|||++...... .......|+..|+||
T Consensus       104 ~l~~~~~~~i~~qi~~aL--~~LH~~~i~H~dlkp~Nil~~~~---~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~y~aP  177 (337)
T cd07858         104 TLSDDHCQYFLYQLLRGL--KYIHSANVLHRDLKPSNLLLNAN---CDLKICDFGLARTTSEKGDFMTEYVVTRWYRAP  177 (337)
T ss_pred             CCCHHHHHHHHHHHHHHH--HHHHhCCEecCCCCHHHEEEcCC---CCEEECcCccccccCCCcccccccccccCccCh
Confidence            345 57889999999999  99999999999999999999875   78999999998876433 223455778889887

Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati

>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1

Probab=99.33  E-value=4e-12  Score=79.45  Aligned_cols=70  Identities=27%  Similarity=0.638  Sum_probs=56.7

Q ss_pred             cH-HHHHHHHHHHHHHHHHHHhhh-CCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCccccccccccccccC
Q psy8010          12 IP-RLVAKVTVTLLGSLNHHFTST-HSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDVDVREILGTPDYVGE   87 (87)
Q Consensus        12 ~~-~~~~~~~~q~~~~l~~~~~h~-~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~~~~~~~gt~~y~aP   87 (87)
                      ++ ..+..++.|++.++  .|+|. .+++|+|++|+|++++.+   ..++++|||++..+... ......|++.|+||
T Consensus       100 ~~~~~~~~~~~~l~~~l--~~lH~~~~ivH~dlkp~Nili~~~---~~~kL~Dfg~~~~~~~~-~~~~~~~~~~y~aP  171 (333)
T cd06650         100 IPEQILGKVSIAVIKGL--TYLREKHKIMHRDVKPSNILVNSR---GEIKLCDFGVSGQLIDS-MANSFVGTRSYMSP  171 (333)
T ss_pred             CCHHHHHHHHHHHHHHH--HHHHhcCCEEecCCChhhEEEcCC---CCEEEeeCCcchhhhhh-ccccCCCCccccCH
Confidence            44 46788999999999  99997 479999999999999874   67999999998755322 22345788999987

Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst

>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7

Probab=99.33  E-value=3.1e-12  Score=78.48  Aligned_cols=73  Identities=32%  Similarity=0.596  Sum_probs=57.9

Q ss_pred             hhcH-HHHHHHHHHHHHHHHHHHhhh-CCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCccccccccccccccC
Q psy8010          10 ARIP-RLVAKVTVTLLGSLNHHFTST-HSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDVDVREILGTPDYVGE   87 (87)
Q Consensus        10 ~~~~-~~~~~~~~q~~~~l~~~~~h~-~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~~~~~~~gt~~y~aP   87 (87)
                      ..++ ..+..++.|++.++  .|+|+ .+++|+|++|.|++++.+   ..++++|||++..+..........+++.|+||
T Consensus       109 ~~l~~~~~~~i~~~i~~~l--~~lH~~~~i~H~dl~p~nill~~~---~~~kL~dfg~~~~~~~~~~~~~~~~~~~y~aP  183 (296)
T cd06618         109 GPIPEDILGKMTVAIVKAL--HYLKEKHGVIHRDVKPSNILLDAS---GNVKLCDFGISGRLVDSKAKTRSAGCAAYMAP  183 (296)
T ss_pred             CCCCHHHHHHHHHHHHHHH--HHHHhhCCEecCCCcHHHEEEcCC---CCEEECccccchhccCCCcccCCCCCccccCH
Confidence            3455 46678999999999  99997 699999999999999874   78999999998766443333344677778876

Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it

>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10

Probab=99.33  E-value=2.9e-12  Score=77.52  Aligned_cols=79  Identities=6%  Similarity=0.044  Sum_probs=57.7

Q ss_pred             HHHHHhhhcH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCccc--ccccc
Q psy8010           4 FIITLVARIP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDVDV--REILG   80 (87)
Q Consensus         4 ~~~~~~~~~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~~~--~~~~g   80 (87)
                      +++.....++ +.+..++.|++.|+  .++|+++++|+|++|.|+++..+   ..++++|||.+.........  ....+
T Consensus        96 ~l~~~~~~l~~~~~~~~~~~i~~al--~~lH~~~iiH~dikp~nili~~~---~~~~l~dfg~~~~~~~~~~~~~~~~~~  170 (266)
T cd05064          96 FLRKHEGQLVAGQLMGMLPGLASGM--KYLSEMGYVHKGLAAHKVLVNSD---LVCKISGFRRLQEDKSEAIYTTMSGKS  170 (266)
T ss_pred             HHHhCCCCCCHHHHHHHHHHHHHHH--HHHHHCCEeeccccHhhEEEcCC---CcEEECCCcccccccccchhcccCCCC
Confidence            3333333455 57889999999999  99999999999999999999874   78999999976543221111  12344


Q ss_pred             ccccccC
Q psy8010          81 TPDYVGE   87 (87)
Q Consensus        81 t~~y~aP   87 (87)
                      ++.|+||
T Consensus       171 ~~~y~aP  177 (266)
T cd05064         171 PVLWAAP  177 (266)
T ss_pred             ceeecCH
Confidence            5678876

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor

>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases

Probab=99.33  E-value=4.2e-12  Score=76.66  Aligned_cols=79  Identities=13%  Similarity=0.188  Sum_probs=58.9

Q ss_pred             HHHHHhhhcH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCC-Ccccc--ccc
Q psy8010           4 FIITLVARIP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSR-DVDVR--EIL   79 (87)
Q Consensus         4 ~~~~~~~~~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~-~~~~~--~~~   79 (87)
                      ++....+.++ +.+..++.|++.++  .++|+.+++|+|++|.|++++.+   ..++++|||++..+.. .....  ...
T Consensus        95 ~~~~~~~~~~~~~~~~~~~~l~~~l--~~Lh~~~i~H~di~p~nili~~~---~~~~l~dfg~~~~~~~~~~~~~~~~~~  169 (266)
T cd05033          95 FLRENDGKFTVGQLVGMLRGIASGM--KYLSEMNYVHRDLAARNILVNSN---LVCKVSDFGLSRRLEDSEATYTTKGGK  169 (266)
T ss_pred             HHHhccCCCCHHHHHHHHHHHHHHH--HHHHhCCcccCCCCcceEEEcCC---CCEEECccchhhcccccccceeccCCC
Confidence            3333334455 57889999999999  99999999999999999999874   7899999999887642 11111  123


Q ss_pred             cccccccC
Q psy8010          80 GTPDYVGE   87 (87)
Q Consensus        80 gt~~y~aP   87 (87)
                      +++.|+||
T Consensus       170 ~~~~y~~P  177 (266)
T cd05033         170 IPIRWTAP  177 (266)
T ss_pred             CCccccCh
Confidence            34567776

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment

>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase

Probab=99.33  E-value=4e-12  Score=76.39  Aligned_cols=72  Identities=13%  Similarity=0.202  Sum_probs=55.6

Q ss_pred             hcH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCccc--cccccccccccC
Q psy8010          11 RIP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDVDV--REILGTPDYVGE   87 (87)
Q Consensus        11 ~~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~~~--~~~~gt~~y~aP   87 (87)
                      .++ +.+..++.|++.++  .|+|+.+++|+|++|.|+++..+   ..++++|||.+.........  ....++..|+||
T Consensus        96 ~~~~~~~~~~~~~i~~~l--~~lH~~~i~H~dl~p~ni~i~~~---~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~y~aP  170 (256)
T cd05114          96 KLSKDMLLSMCQDVCEGM--EYLERNSFIHRDLAARNCLVSST---GVVKVSDFGMTRYVLDDEYTSSSGAKFPVKWSPP  170 (256)
T ss_pred             CCCHHHHHHHHHHHHHHH--HHHHHCCccccccCcceEEEcCC---CeEEECCCCCccccCCCceeccCCCCCchhhCCh
Confidence            455 57888999999999  99999999999999999999874   78999999988765332222  122344567776

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h

>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases

Probab=99.33  E-value=2.6e-12  Score=79.05  Aligned_cols=75  Identities=23%  Similarity=0.392  Sum_probs=58.4

Q ss_pred             hcH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCC-CCCcEEEEeeccceecCCCc----ccccccccccc
Q psy8010          11 RIP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEY-PDCDVKLCDFGISRHLSRDV----DVREILGTPDY   84 (87)
Q Consensus        11 ~~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~-~~~~~kl~dfg~~~~~~~~~----~~~~~~gt~~y   84 (87)
                      .++ +.+..++.|++.++  .|+|+.+++|+|++|.|++++.++ .+..++++|||++.......    ......+++.|
T Consensus       104 ~~~~~~~~~i~~qi~~~l--~~lH~~~i~h~dlkp~Nil~~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y  181 (316)
T cd07842         104 SIPPSMVKSLLWQILNGV--HYLHSNWVLHRDLKPANILVMGEGPERGVVKIGDLGLARLFNAPLKPLADLDPVVVTIWY  181 (316)
T ss_pred             CcCHHHHHHHHHHHHHHH--HHHHhCCEeeCCCCHHHEEEcCCCCccceEEECCCccccccCCCcccccccCCccccccc
Confidence            344 46788999999999  999999999999999999998721 13679999999988653221    12345778889


Q ss_pred             ccC
Q psy8010          85 VGE   87 (87)
Q Consensus        85 ~aP   87 (87)
                      +||
T Consensus       182 ~aP  184 (316)
T cd07842         182 RAP  184 (316)
T ss_pred             cCH
Confidence            887

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the

>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2

Probab=99.33  E-value=2.5e-12  Score=79.29  Aligned_cols=50  Identities=16%  Similarity=0.327  Sum_probs=45.8

Q ss_pred             HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeecccee
Q psy8010          14 RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRH   68 (87)
Q Consensus        14 ~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~   68 (87)
                      +.+..++.|++.++  .++|+.+++|+|++|.|++++.+   ..++++|||++..
T Consensus       124 ~~~~~~~~qi~~al--~~LH~~gi~H~dlkp~Nili~~~---~~~kl~dfg~~~~  173 (303)
T cd05088         124 QQLLHFAADVARGM--DYLSQKQFIHRDLAARNILVGEN---YVAKIADFGLSRG  173 (303)
T ss_pred             HHHHHHHHHHHHHH--HHHHhCCccccccchheEEecCC---CcEEeCccccCcc
Confidence            47888999999999  99999999999999999999874   7899999998864

Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A

>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor

Probab=99.33  E-value=3.2e-12  Score=77.65  Aligned_cols=69  Identities=12%  Similarity=0.222  Sum_probs=54.8

Q ss_pred             HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCccc---cccccccccccC
Q psy8010          14 RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDVDV---REILGTPDYVGE   87 (87)
Q Consensus        14 ~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~~~---~~~~gt~~y~aP   87 (87)
                      ..+..++.|++.++  .|+|+.+++|+|++|.|++++.+   ..++++|||++..+......   ....+++.|+||
T Consensus       119 ~~~~~~~~~l~~~l--~~lH~~~~vH~dlkp~Nil~~~~---~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aP  190 (277)
T cd05062         119 KKMIQMAGEIADGM--AYLNANKFVHRDLAARNCMVAED---FTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSP  190 (277)
T ss_pred             HHHHHHHHHHHHHH--HHHHHCCcccCCcchheEEEcCC---CCEEECCCCCccccCCcceeecCCCCccCHhhcCh
Confidence            35778899999999  99999999999999999999974   78999999998765332211   123456778887

Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh

>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4

Probab=99.32  E-value=2.1e-12  Score=78.71  Aligned_cols=73  Identities=26%  Similarity=0.525  Sum_probs=58.5

Q ss_pred             hhcH-HHHHHHHHHHHHHHHHHHhhh-CCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCccccccccccccccC
Q psy8010          10 ARIP-RLVAKVTVTLLGSLNHHFTST-HSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDVDVREILGTPDYVGE   87 (87)
Q Consensus        10 ~~~~-~~~~~~~~q~~~~l~~~~~h~-~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~~~~~~~gt~~y~aP   87 (87)
                      ..++ +.+..++.|++.++  .|+|. .+++|+|++|.|++++.+   ..++++|||++..+..........|++.|+||
T Consensus       102 ~~l~~~~~~~i~~~i~~~l--~~lh~~~~i~H~dlkp~Nil~~~~---~~~kl~dfg~~~~~~~~~~~~~~~~~~~y~aP  176 (288)
T cd06616         102 SVIPEEILGKIAVATVKAL--NYLKEELKIIHRDVKPSNILLDRN---GNIKLCDFGISGQLVDSIAKTRDAGCRPYMAP  176 (288)
T ss_pred             CCCCHHHHHHHHHHHHHHH--HHHhhcCCeeccCCCHHHEEEccC---CcEEEeecchhHHhccCCccccccCccCccCH
Confidence            3455 57889999999999  99997 599999999999999874   68999999998765443333344678888887

Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates

>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B

Probab=99.32  E-value=4.3e-12  Score=77.55  Aligned_cols=71  Identities=11%  Similarity=0.181  Sum_probs=56.7

Q ss_pred             cH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCccc---cccccccccccC
Q psy8010          12 IP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDVDV---REILGTPDYVGE   87 (87)
Q Consensus        12 ~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~~~---~~~~gt~~y~aP   87 (87)
                      ++ +.+..++.|++.++  .++|.++++|+|++|.|++++..   ..++++|||++.........   ....+++.|+||
T Consensus       117 l~~~~~~~~~~ql~~aL--~~lH~~~i~H~dlkp~Nili~~~---~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aP  191 (288)
T cd05093         117 LTQSQMLHIAQQIAAGM--VYLASQHFVHRDLATRNCLVGEN---LLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPP  191 (288)
T ss_pred             CCHHHHHHHHHHHHHHH--HHHHhCCeeecccCcceEEEccC---CcEEeccCCccccccCCceeecCCCCCccccccCH
Confidence            45 47889999999999  99999999999999999999875   78999999998765332211   233456778887

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly

>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=99.32  E-value=4.8e-12  Score=76.25  Aligned_cols=71  Identities=25%  Similarity=0.224  Sum_probs=54.9

Q ss_pred             cH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCC-----CCcEEEEeeccceecCCCccccccccccccc
Q psy8010          12 IP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYP-----DCDVKLCDFGISRHLSRDVDVREILGTPDYV   85 (87)
Q Consensus        12 ~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~-----~~~~kl~dfg~~~~~~~~~~~~~~~gt~~y~   85 (87)
                      ++ .....++.|++.++  .|+|+++++|+|++|.|++++.++.     ...++++|||++......   ....+++.|+
T Consensus        97 ~~~~~~~~~~~qi~~~l--~~lH~~~iiH~dlkp~nili~~~~~~~~~~~~~~~l~d~g~~~~~~~~---~~~~~~~~y~  171 (258)
T cd05078          97 INISWKLEVAKQLAWAL--HFLEDKGLTHGNVCAKNVLLIREEDRKTGNPPFIKLSDPGISITVLPK---EILLERIPWV  171 (258)
T ss_pred             CCHHHHHHHHHHHHHHH--HHHHHCCeecCCCccceEEEecccccccCCCceEEecccccccccCCc---hhccccCCcc
Confidence            45 46778899999999  9999999999999999999987521     123789999988754322   2346777788


Q ss_pred             cC
Q psy8010          86 GE   87 (87)
Q Consensus        86 aP   87 (87)
                      ||
T Consensus       172 aP  173 (258)
T cd05078         172 PP  173 (258)
T ss_pred             Cc
Confidence            87

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity

>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2

Probab=99.32  E-value=4.2e-12  Score=76.63  Aligned_cols=69  Identities=22%  Similarity=0.370  Sum_probs=56.1

Q ss_pred             HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCC----ccccccccccccccC
Q psy8010          14 RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRD----VDVREILGTPDYVGE   87 (87)
Q Consensus        14 ~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~----~~~~~~~gt~~y~aP   87 (87)
                      +.+..++.|++.++  .++|+++++|+|++|.|++++.+   ..++++|||++......    .......|+..|+||
T Consensus       106 ~~~~~~~~~l~~~l--~~lH~~~i~H~dl~p~nil~~~~---~~~~l~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aP  178 (265)
T cd06652         106 NVTRKYTRQILEGV--SYLHSNMIVHRDIKGANILRDSV---GNVKLGDFGASKRLQTICLSGTGMKSVTGTPYWMSP  178 (265)
T ss_pred             HHHHHHHHHHHHHH--HHHHhCCEecCCCCHHHEEecCC---CCEEECcCccccccccccccccccccCCCCccccCh
Confidence            46788899999999  99999999999999999999874   78999999988754321    122345688889887

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re

>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2

Probab=99.32  E-value=5.8e-12  Score=76.31  Aligned_cols=68  Identities=16%  Similarity=0.252  Sum_probs=53.7

Q ss_pred             HHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCc---cccccccccccccC
Q psy8010          15 LVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDV---DVREILGTPDYVGE   87 (87)
Q Consensus        15 ~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~---~~~~~~gt~~y~aP   87 (87)
                      .+..++.|++.|+  .|+|+.+++|+|++|.|++++.+   ..++++|||++.......   ......|++.|+||
T Consensus       100 ~~~~~~~~i~~al--~~lH~~~i~H~dikp~nil~~~~---~~~~l~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aP  170 (268)
T cd05086         100 LLQRMACEIAAGV--THMHKHNFLHSDLALRNCFLTSD---LTVKVGDYGIGPSRYKEDYIETEDDKCVPLRWLAP  170 (268)
T ss_pred             HHHHHHHHHHHHH--HHHHHCCeeccCCccceEEEcCC---ccEEecccccccccCcchhhhcccCCcCcccccCc
Confidence            5678899999999  99999999999999999999874   789999999876432111   11234677778877

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage

>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases

Probab=99.32  E-value=7.2e-12  Score=75.93  Aligned_cols=72  Identities=28%  Similarity=0.445  Sum_probs=58.9

Q ss_pred             hcH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCc-cccccccccccccC
Q psy8010          11 RIP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDV-DVREILGTPDYVGE   87 (87)
Q Consensus        11 ~~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~-~~~~~~gt~~y~aP   87 (87)
                      .++ ..+..++.|++.++  .++|..+++|+|++|.|++++.+   ..++++|||.+....... ......++..|+||
T Consensus        94 ~~~~~~~~~~~~~i~~~l--~~LH~~~i~H~dl~p~nili~~~---~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~P  167 (283)
T cd05118          94 GLPESLIKSYLYQLLQGL--AFCHSHGILHRDLKPENLLINTE---GVLKLADFGLARSFGSPVRPYTHYVVTRWYRAP  167 (283)
T ss_pred             cCCHHHHHHHHHHHHHHH--HHHHHCCeeecCcCHHHEEECCC---CcEEEeeeeeeEecCCCcccccCccCcccccCc
Confidence            444 57888999999999  99999999999999999999874   789999999988764433 23345677788887

Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They

>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase

Probab=99.32  E-value=7.6e-12  Score=75.61  Aligned_cols=70  Identities=20%  Similarity=0.283  Sum_probs=55.6

Q ss_pred             HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCc-cccccccccccccC
Q psy8010          14 RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDV-DVREILGTPDYVGE   87 (87)
Q Consensus        14 ~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~-~~~~~~gt~~y~aP   87 (87)
                      ..+..++.|++.++  .++|..+++|+|++|.|++++..  ...++++|||.+....... ......|++.|+||
T Consensus       108 ~~~~~~~~qi~~al--~~lH~~~i~h~dl~p~nil~~~~--~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~aP  178 (268)
T cd06624         108 QTIIFYTKQILEGL--KYLHDNQIVHRDIKGDNVLVNTY--SGVVKISDFGTSKRLAGINPCTETFTGTLQYMAP  178 (268)
T ss_pred             HHHHHHHHHHHHHH--HHHHHCCEeecCCCHHHEEEcCC--CCeEEEecchhheecccCCCccccCCCCccccCh
Confidence            46778889999999  99999999999999999999764  3579999999987653222 22334677888887

Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina

>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2

Probab=99.32  E-value=5.2e-12  Score=75.57  Aligned_cols=73  Identities=22%  Similarity=0.400  Sum_probs=59.0

Q ss_pred             hhcH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCc-cccccccccccccC
Q psy8010          10 ARIP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDV-DVREILGTPDYVGE   87 (87)
Q Consensus        10 ~~~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~-~~~~~~gt~~y~aP   87 (87)
                      ..++ +.+..++.|++.++  .++|..+++|+|++|.|++++..   ..++++|||++....... ......|+..|+||
T Consensus        94 ~~l~~~~~~~~~~~l~~~l--~~lh~~~i~H~dl~~~ni~~~~~---~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~~P  168 (256)
T cd06612          94 KTLTEEEIAAILYQTLKGL--EYLHSNKKIHRDIKAGNILLNEE---GQAKLADFGVSGQLTDTMAKRNTVIGTPFWMAP  168 (256)
T ss_pred             cCCCHHHHHHHHHHHHHHH--HHHHHCCcccCCCCcceEEECCC---CcEEEcccccchhcccCccccccccCCccccCH
Confidence            3455 57889999999999  99999999999999999999885   789999999988664332 22344677888887

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a

>KOG0574|consensus

Probab=99.32  E-value=5.6e-13  Score=82.85  Aligned_cols=80  Identities=18%  Similarity=0.314  Sum_probs=65.2

Q ss_pred             hHHHHHhhhcH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCc-ccccccc
Q psy8010           3 NFIITLVARIP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDV-DVREILG   80 (87)
Q Consensus         3 ~~~~~~~~~~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~-~~~~~~g   80 (87)
                      +.++--.+.+. .++..+++..+.++  +|+|...-+|||+|..||+++.+   +.-|++|||.+..+.+.- ...+..|
T Consensus       117 DI~R~R~K~L~E~EIs~iL~~TLKGL--~YLH~~~KIHRDIKAGNILLNT~---G~AKLADFGVAGQLTDTMAKRNTVIG  191 (502)
T KOG0574|consen  117 DIMRARRKPLSEQEISAVLRDTLKGL--QYLHDLKKIHRDIKAGNILLNTD---GIAKLADFGVAGQLTDTMAKRNTVIG  191 (502)
T ss_pred             HHHHHhcCCccHHHHHHHHHHHHhHH--HHHHHHHHHHhhcccccEEEccc---chhhhhhccccchhhhhHHhhCcccc
Confidence            34444455555 47888889999999  99999999999999999999995   789999999988765433 2357799


Q ss_pred             ccccccC
Q psy8010          81 TPDYVGE   87 (87)
Q Consensus        81 t~~y~aP   87 (87)
                      ||+||||
T Consensus       192 TPFWMAP  198 (502)
T KOG0574|consen  192 TPFWMAP  198 (502)
T ss_pred             CcccccH
Confidence            9999998

>PLN00009 cyclin-dependent kinase A; Provisional

Probab=99.31  E-value=7.2e-12  Score=76.66  Aligned_cols=70  Identities=24%  Similarity=0.389  Sum_probs=55.8

Q ss_pred             HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCc-cccccccccccccC
Q psy8010          14 RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDV-DVREILGTPDYVGE   87 (87)
Q Consensus        14 ~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~-~~~~~~gt~~y~aP   87 (87)
                      +.+..++.|++.|+  .++|+++++|+|++|.|++++..  +..++++|||++....... ......|++.|+||
T Consensus       102 ~~~~~~~~qi~~aL--~~LH~~~i~H~dl~p~nill~~~--~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~~P  172 (294)
T PLN00009        102 RLIKTYLYQILRGI--AYCHSHRVLHRDLKPQNLLIDRR--TNALKLADFGLARAFGIPVRTFTHEVVTLWYRAP  172 (294)
T ss_pred             HHHHHHHHHHHHHH--HHHHhCCeeCCCCCcceEEEECC--CCEEEEcccccccccCCCccccccCceeecccCH
Confidence            46778899999999  99999999999999999999864  3579999999987653222 22345677888887

>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2

Probab=99.31  E-value=7.8e-12  Score=78.40  Aligned_cols=69  Identities=17%  Similarity=0.328  Sum_probs=54.5

Q ss_pred             HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCccc---cccccccccccC
Q psy8010          14 RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDVDV---REILGTPDYVGE   87 (87)
Q Consensus        14 ~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~~~---~~~~gt~~y~aP   87 (87)
                      +.+..++.|++.++  .|+|+++++|+|++|.|+++..+   ..++++|||++.........   ....+++.|+||
T Consensus       179 ~~~~~~~~qi~~al--~~lH~~~i~H~dikp~Nil~~~~---~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aP  250 (343)
T cd05103         179 EDLICYSFQVAKGM--EFLASRKCIHRDLAARNILLSEN---NVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAP  250 (343)
T ss_pred             HHHHHHHHHHHHHH--HHHHhCCeecCCCccCeEEEcCC---CcEEEEecccccccccCcchhhcCCCCCCcceECc
Confidence            46788999999999  99999999999999999999874   78999999998765322211   122345568877

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp

>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome

Probab=99.31  E-value=5.7e-12  Score=75.90  Aligned_cols=72  Identities=14%  Similarity=0.170  Sum_probs=55.6

Q ss_pred             hcH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCcccc--ccccccccccC
Q psy8010          11 RIP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDVDVR--EILGTPDYVGE   87 (87)
Q Consensus        11 ~~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~~~~--~~~gt~~y~aP   87 (87)
                      .++ +.+..++.|++.++  .++|+.+++|+|++|.|++++.+   ..++++|||.++.........  ...++..|+||
T Consensus        96 ~~~~~~~~~~~~~i~~~l--~~lH~~~i~H~dl~p~nili~~~---~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~y~~p  170 (256)
T cd05113          96 RFQPSQLLEMCKDVCEGM--AYLESKQFIHRDLAARNCLVDDQ---GCVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPP  170 (256)
T ss_pred             CCCHHHHHHHHHHHHHHH--HHHHhCCeeccccCcceEEEcCC---CCEEECCCccceecCCCceeecCCCccChhhCCH
Confidence            455 57899999999999  99999999999999999999874   789999999988654332211  12334557765

Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds

>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=99.31  E-value=6.2e-12  Score=76.58  Aligned_cols=72  Identities=10%  Similarity=0.176  Sum_probs=56.1

Q ss_pred             hcH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCccc----cccccccccc
Q psy8010          11 RIP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDVDV----REILGTPDYV   85 (87)
Q Consensus        11 ~~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~~~----~~~~gt~~y~   85 (87)
                      .++ ..+..++.|++.++  .++|+++++|+|++|.|++++.+   ..++++|||++.....+...    ....++..|+
T Consensus       103 ~l~~~~~~~i~~~l~~~l--~~lH~~~i~H~dlkp~Nili~~~---~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~  177 (283)
T cd05080         103 KLNLAQLLLFAQQICEGM--AYLHSQHYIHRDLAARNVLLDND---RLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWY  177 (283)
T ss_pred             CCCHHHHHHHHHHHHHHH--HHHHHCCeeccccChheEEEcCC---CcEEEeecccccccCCcchhhccCCCCCCCceee
Confidence            345 57889999999999  99999999999999999999875   78999999998865433221    1223455677


Q ss_pred             cC
Q psy8010          86 GE   87 (87)
Q Consensus        86 aP   87 (87)
                      ||
T Consensus       178 ~P  179 (283)
T cd05080         178 AV  179 (283)
T ss_pred             CH
Confidence            76

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign

>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1

Probab=99.31  E-value=5.5e-12  Score=75.48  Aligned_cols=69  Identities=17%  Similarity=0.288  Sum_probs=57.2

Q ss_pred             HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCccccccccccccccC
Q psy8010          14 RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDVDVREILGTPDYVGE   87 (87)
Q Consensus        14 ~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~~~~~~~gt~~y~aP   87 (87)
                      ..+..++.|++.++  .++|+.+++|+|++|.|++++.+   ..++++|||++.............|++.|++|
T Consensus       102 ~~~~~~~~~i~~~l--~~lH~~~i~H~dl~~~ni~~~~~---~~~kl~d~~~~~~~~~~~~~~~~~~~~~y~~p  170 (258)
T cd06632         102 PVIRLYTRQILLGL--EYLHDRNTVHRDIKGANILVDTN---GVVKLADFGMAKQVVEFSFAKSFKGSPYWMAP  170 (258)
T ss_pred             HHHHHHHHHHHHHH--HHHHHCCcccCCCCHHHEEECCC---CCEEEccCccceeccccccccccCCCcceeCH
Confidence            46778899999999  99999999999999999999874   78999999998765443333455678888876

Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops

>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9

Probab=99.31  E-value=6.1e-12  Score=75.43  Aligned_cols=71  Identities=23%  Similarity=0.380  Sum_probs=58.5

Q ss_pred             cH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCc-cccccccccccccC
Q psy8010          12 IP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDV-DVREILGTPDYVGE   87 (87)
Q Consensus        12 ~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~-~~~~~~gt~~y~aP   87 (87)
                      ++ ..+..++.|++.++  .++|+.+++|+|++|.|++++.+   ..++++|||++....... ......|++.|+||
T Consensus        98 ~~~~~~~~~~~~l~~~l--~~lh~~~i~h~dl~p~ni~~~~~---~~~kl~d~~~~~~~~~~~~~~~~~~~~~~y~ap  170 (256)
T cd08221          98 FEEEMVLWYLFQIVSAV--SYIHKAGILHRDIKTLNIFLTKA---GLIKLGDFGISKILGSEYSMAETVVGTPYYMSP  170 (256)
T ss_pred             CCHHHHHHHHHHHHHHH--HHHHhCCccccCCChHhEEEeCC---CCEEECcCcceEEcccccccccccCCCccccCH
Confidence            44 47788999999999  99999999999999999999885   789999999988664332 23445788888887

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa

>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases

Probab=99.31  E-value=4.7e-12  Score=76.70  Aligned_cols=69  Identities=13%  Similarity=0.162  Sum_probs=52.3

Q ss_pred             HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCccccccccccccccC
Q psy8010          14 RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDVDVREILGTPDYVGE   87 (87)
Q Consensus        14 ~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~~~~~~~gt~~y~aP   87 (87)
                      +.+..++.|++.++  .++|+.+++|+|++|+|++++.+   ..++++|||++.............++..|+||
T Consensus       112 ~~~~~~~~~i~~al--~~lH~~~i~H~dikp~nili~~~---~~~kl~dfgl~~~~~~~~~~~~~~~~~~y~ap  180 (270)
T cd05047         112 QQLLHFAADVARGM--DYLSQKQFIHRDLAARNILVGEN---YVAKIADFGLSRGQEVYVKKTMGRLPVRWMAI  180 (270)
T ss_pred             HHHHHHHHHHHHHH--HHHHHCCEeecccccceEEEcCC---CeEEECCCCCccccchhhhccCCCCccccCCh
Confidence            56788999999999  99999999999999999999875   78999999987642211111112234457766

Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l

>KOG0671|consensus

Probab=99.31  E-value=1.4e-11  Score=77.76  Aligned_cols=73  Identities=21%  Similarity=0.322  Sum_probs=59.6

Q ss_pred             hcH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCC-----------------CCCcEEEEeeccceecCCC
Q psy8010          11 RIP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEY-----------------PDCDVKLCDFGISRHLSRD   72 (87)
Q Consensus        11 ~~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~-----------------~~~~~kl~dfg~~~~~~~~   72 (87)
                      +|| .+++.+.+|++.++  .++|+.+++|.|+||+||++.+..                 .+..++++|||-|..-  .
T Consensus       188 ~fpi~~ir~m~~QL~~sv--~fLh~~kl~HTDLKPENILfvss~~~~~~~~k~~~~~~r~~ks~~I~vIDFGsAtf~--~  263 (415)
T KOG0671|consen  188 PFPIDHIRHMGYQLLESV--AFLHDLKLTHTDLKPENILFVSSEYFKTYNPKKKVCFIRPLKSTAIKVIDFGSATFD--H  263 (415)
T ss_pred             ccchHHHHHHHHHHHHHH--HHHHhcceeecCCChheEEEeccceEEEeccCCccceeccCCCcceEEEecCCccee--c
Confidence            377 78999999999999  999999999999999999975432                 1345899999988753  3


Q ss_pred             ccccccccccccccC
Q psy8010          73 VDVREILGTPDYVGE   87 (87)
Q Consensus        73 ~~~~~~~gt~~y~aP   87 (87)
                      +.+.+.+.|..|+||
T Consensus       264 e~hs~iVsTRHYRAP  278 (415)
T KOG0671|consen  264 EHHSTIVSTRHYRAP  278 (415)
T ss_pred             cCcceeeeccccCCc
Confidence            344667889999998

>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C

Probab=99.31  E-value=6.8e-12  Score=76.81  Aligned_cols=69  Identities=12%  Similarity=0.170  Sum_probs=56.2

Q ss_pred             HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCcc---ccccccccccccC
Q psy8010          14 RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDVD---VREILGTPDYVGE   87 (87)
Q Consensus        14 ~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~~---~~~~~gt~~y~aP   87 (87)
                      +.+..++.|++.++  .++|.++++|+|++|.|++++.+   ..++++|||++........   .....|++.|+||
T Consensus       123 ~~~~~i~~~i~~al--~~lH~~~i~H~dlkp~Nil~~~~---~~~~l~dfg~a~~~~~~~~~~~~~~~~~~~~y~aP  194 (291)
T cd05094         123 SQMLHIASQIASGM--VYLASQHFVHRDLATRNCLVGAN---LLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPP  194 (291)
T ss_pred             HHHHHHHHHHHHHH--HHHHhCCeeecccCcceEEEccC---CcEEECCCCcccccCCCceeecCCCCCcceeecCh
Confidence            46888999999999  99999999999999999999875   7899999999876533221   1234567788887

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n

>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha

Probab=99.30  E-value=8.3e-12  Score=80.10  Aligned_cols=69  Identities=17%  Similarity=0.300  Sum_probs=56.1

Q ss_pred             HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCcc---ccccccccccccC
Q psy8010          14 RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDVD---VREILGTPDYVGE   87 (87)
Q Consensus        14 ~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~~---~~~~~gt~~y~aP   87 (87)
                      ..+..++.|++.++  .|+|..+++|+|++|.|++++.+   ..++++|||++..+.....   .....+++.|+||
T Consensus       237 ~~~~~~~~qi~~aL--~~LH~~~ivH~dikp~Nill~~~---~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aP  308 (400)
T cd05105         237 LDLLSFTYQVARGM--EFLASKNCVHRDLAARNVLLAQG---KIVKICDFGLARDIMHDSNYVSKGSTFLPVKWMAP  308 (400)
T ss_pred             HHHHHHHHHHHHHH--HHHHhCCeeCCCCChHhEEEeCC---CEEEEEeCCcceeccccccccccCCcCCCcceECh
Confidence            46788999999999  99999999999999999999885   7799999999886533221   1233566778887

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-

>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional

Probab=99.30  E-value=1e-11  Score=75.42  Aligned_cols=70  Identities=20%  Similarity=0.356  Sum_probs=57.4

Q ss_pred             hcH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCccccccccccccccC
Q psy8010          11 RIP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDVDVREILGTPDYVGE   87 (87)
Q Consensus        11 ~~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~~~~~~~gt~~y~aP   87 (87)
                      .++ +++..++.|++.++  .++|+.+++|+|++|.|+++...  ...++++|||++......   ....|++.|+||
T Consensus       105 ~l~~~~~~~~~~qi~~~l--~~lH~~~i~H~dl~p~nil~~~~--~~~~~l~dfg~~~~~~~~---~~~~~~~~y~aP  175 (267)
T PHA03390        105 KLSEAEVKKIIRQLVEAL--NDLHKHNIIHNDIKLENVLYDRA--KDRIYLCDYGLCKIIGTP---SCYDGTLDYFSP  175 (267)
T ss_pred             CCCHHHHHHHHHHHHHHH--HHHHhCCeeeCCCCHHHEEEeCC--CCeEEEecCccceecCCC---ccCCCCCcccCh
Confidence            445 57899999999999  99999999999999999999885  127999999998765322   234677888887

>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src

Probab=99.30  E-value=9.2e-12  Score=75.22  Aligned_cols=69  Identities=9%  Similarity=0.181  Sum_probs=55.4

Q ss_pred             HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCccc--cccccccccccC
Q psy8010          14 RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDVDV--REILGTPDYVGE   87 (87)
Q Consensus        14 ~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~~~--~~~~gt~~y~aP   87 (87)
                      +.+..++.|++.++  .++|+.+++|+|++|.|+++..+   ..++++|||.+..+......  ....++..|+||
T Consensus       102 ~~~~~~~~~l~~aL--~~lH~~~i~H~dl~p~Nill~~~---~~~~L~dfg~~~~~~~~~~~~~~~~~~~~~y~~P  172 (262)
T cd05071         102 PQLVDMAAQIASGM--AYVERMNYVHRDLRAANILVGEN---LVCKVADFGLARLIEDNEYTARQGAKFPIKWTAP  172 (262)
T ss_pred             HHHHHHHHHHHHHH--HHHHHCCccccccCcccEEEcCC---CcEEeccCCceeeccccccccccCCcccceecCH
Confidence            57788999999999  99999999999999999999874   78999999998766433221  123455668877

Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo

>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6

Probab=99.30  E-value=4.7e-12  Score=76.33  Aligned_cols=71  Identities=30%  Similarity=0.473  Sum_probs=58.0

Q ss_pred             cH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCcc-ccccccccccccC
Q psy8010          12 IP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDVD-VREILGTPDYVGE   87 (87)
Q Consensus        12 ~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~~-~~~~~gt~~y~aP   87 (87)
                      ++ +.+..++.|++.++  .|+|+.+++|+|++|+|++++.+   ..++++|||++..+..... .....|++.|+||
T Consensus       103 ~~~~~~~~~~~~i~~~l--~~LH~~~i~H~dl~~~nil~~~~---~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~~aP  175 (267)
T cd08228         103 IPERTVWKYFVQLCSAV--EHMHSRRVMHRDIKPANVFITAT---GVVKLGDLGLGRFFSSKTTAAHSLVGTPYYMSP  175 (267)
T ss_pred             CCHHHHHHHHHHHHHHH--HHHhhCCeeCCCCCHHHEEEcCC---CCEEECccccceeccchhHHHhcCCCCccccCh
Confidence            44 57789999999999  99999999999999999999874   6799999999887643222 2345678888887

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase

>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4

Probab=99.30  E-value=7e-12  Score=77.57  Aligned_cols=69  Identities=10%  Similarity=0.158  Sum_probs=54.2

Q ss_pred             HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCcc---ccccccccccccC
Q psy8010          14 RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDVD---VREILGTPDYVGE   87 (87)
Q Consensus        14 ~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~~---~~~~~gt~~y~aP   87 (87)
                      +.+..++.|++.++  .|+|++|++|+|++|.|++++.+   ..++++|||+++.......   .....+++.||||
T Consensus       134 ~~~~~~~~qi~~aL--~~lH~~gi~H~dlkp~Nill~~~---~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aP  205 (314)
T cd05099         134 KDLVSCAYQVARGM--EYLESRRCIHRDLAARNVLVTED---NVMKIADFGLARGVHDIDYYKKTSNGRLPVKWMAP  205 (314)
T ss_pred             HHHHHHHHHHHHHH--HHHHHCCeeeccccceeEEEcCC---CcEEEccccccccccccccccccccCCCCccccCH
Confidence            46788899999999  99999999999999999999874   7899999999986533221   1122344568877

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase

Probab=99.30  E-value=5.2e-12  Score=77.23  Aligned_cols=72  Identities=26%  Similarity=0.527  Sum_probs=57.8

Q ss_pred             hcH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCc-cccccccccccccC
Q psy8010          11 RIP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDV-DVREILGTPDYVGE   87 (87)
Q Consensus        11 ~~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~-~~~~~~gt~~y~aP   87 (87)
                      +++ +.+..++.|++.++  .++|+++++|+|++|.|++++.+   ..++++|||++....... ......|++.|+||
T Consensus       111 ~~~~~~~~~~~~ql~~~l--~~lH~~~i~H~dl~p~Nil~~~~---~~~~l~d~g~~~~~~~~~~~~~~~~~~~~y~aP  184 (285)
T cd06648         111 RMNEEQIATVCLAVLKAL--SFLHAQGVIHRDIKSDSILLTSD---GRVKLSDFGFCAQVSKEVPRRKSLVGTPYWMAP  184 (285)
T ss_pred             CCCHHHHHHHHHHHHHHH--HHHHhCCeecCCCChhhEEEcCC---CcEEEcccccchhhccCCcccccccCCccccCH
Confidence            344 57788999999999  99999999999999999999874   789999999876543322 22335688888887

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun

>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2

Probab=99.30  E-value=7.9e-12  Score=74.88  Aligned_cols=72  Identities=26%  Similarity=0.452  Sum_probs=59.6

Q ss_pred             hcH-HHHHHHHHHHHHHHHHHHhh-----hCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCcc-ccccccccc
Q psy8010          11 RIP-RLVAKVTVTLLGSLNHHFTS-----THSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDVD-VREILGTPD   83 (87)
Q Consensus        11 ~~~-~~~~~~~~q~~~~l~~~~~h-----~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~~-~~~~~gt~~   83 (87)
                      .++ +.+..++.|++.++  .++|     +.+++|+|++|.|++++..   ..++++|||++........ .....|++.
T Consensus       101 ~l~~~~~~~~~~~i~~~l--~~lH~~~~~~~~i~h~dl~p~nili~~~---~~~kl~d~g~~~~~~~~~~~~~~~~~~~~  175 (265)
T cd08217         101 YIEEEFIWRILTQLLLAL--YECHNRSDPGNTVLHRDLKPANIFLDAN---NNVKLGDFGLAKILGHDSSFAKTYVGTPY  175 (265)
T ss_pred             CCCHHHHHHHHHHHHHHH--HHHhcCccccCcceecCCCHHHEEEecC---CCEEEecccccccccCCcccccccccCCC
Confidence            345 57889999999999  9999     8999999999999999974   7899999999887644333 344578888


Q ss_pred             cccC
Q psy8010          84 YVGE   87 (87)
Q Consensus        84 y~aP   87 (87)
                      |+||
T Consensus       176 ~~~p  179 (265)
T cd08217         176 YMSP  179 (265)
T ss_pred             ccCh
Confidence            9887

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi

>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins

Probab=99.30  E-value=1.6e-11  Score=75.67  Aligned_cols=69  Identities=25%  Similarity=0.366  Sum_probs=56.8

Q ss_pred             hcH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCccccccccccccccC
Q psy8010          11 RIP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDVDVREILGTPDYVGE   87 (87)
Q Consensus        11 ~~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~~~~~~~gt~~y~aP   87 (87)
                      .++ +.+..++.|++.++  .|+|+.+++|+|++|.|++++.+   ..++++|||++......   ....|++.|+||
T Consensus       111 ~l~~~~~~~~~~ql~~~L--~~LH~~~i~H~dl~p~nIl~~~~---~~~kL~dfg~~~~~~~~---~~~~~~~~y~aP  180 (307)
T cd06607         111 PLQEVEIAAICHGALQGL--AYLHSHERIHRDIKAGNILLTEP---GTVKLADFGSASLVSPA---NSFVGTPYWMAP  180 (307)
T ss_pred             CCCHHHHHHHHHHHHHHH--HHHHHCCceecCCCcccEEECCC---CCEEEeecCcceecCCC---CCccCCccccCc
Confidence            344 47888999999999  99999999999999999999885   78999999988764322   234677788887

Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily

>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6

Probab=99.30  E-value=4.1e-12  Score=78.18  Aligned_cols=69  Identities=26%  Similarity=0.492  Sum_probs=57.4

Q ss_pred             HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCc-cccccccccccccC
Q psy8010          14 RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDV-DVREILGTPDYVGE   87 (87)
Q Consensus        14 ~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~-~~~~~~gt~~y~aP   87 (87)
                      +.+..++.|++.++  .++|+.+++|+|++|.|++++.+   ..++++|||++..+.... ......|++.|+||
T Consensus       117 ~~~~~~~~qi~~~L--~~LH~~~ivH~dl~p~Nill~~~---~~~kL~dfg~~~~~~~~~~~~~~~~~~~~y~aP  186 (297)
T cd06659         117 EQIATVCESVLQAL--CYLHSQGVIHRDIKSDSILLTLD---GRVKLSDFGFCAQISKDVPKRKSLVGTPYWMAP  186 (297)
T ss_pred             HHHHHHHHHHHHHH--HHHHhCCeecCCCCHHHeEEccC---CcEEEeechhHhhcccccccccceecCccccCH
Confidence            57888999999999  99999999999999999999875   789999999987553322 22346788889887

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i

>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins

Probab=99.30  E-value=4e-12  Score=78.00  Aligned_cols=72  Identities=14%  Similarity=0.273  Sum_probs=57.8

Q ss_pred             hcH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCcc------------ccc
Q psy8010          11 RIP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDVD------------VRE   77 (87)
Q Consensus        11 ~~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~~------------~~~   77 (87)
                      .++ +.+..++.|++.++  .++|+++++|+|++|.|+++..+   ..++++|||++........            ...
T Consensus       111 ~~~~~~~~~i~~~l~~al--~~lH~~~i~H~dl~p~nil~~~~---~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~  185 (311)
T cd07866         111 KLTESQIKCYMLQLLEGI--NYLHENHILHRDIKAANILIDNQ---GILKIADFGLARPYDGPPPNPKGGGGGGTRKYTN  185 (311)
T ss_pred             CCCHHHHHHHHHHHHHHH--HHHHhCCeecCCCCHHHEEECCC---CCEEECcCccchhccCCCcccccCCccccccccc
Confidence            455 57889999999999  99999999999999999999885   7899999999876532211            123


Q ss_pred             cccccccccC
Q psy8010          78 ILGTPDYVGE   87 (87)
Q Consensus        78 ~~gt~~y~aP   87 (87)
                      ..|++.|+||
T Consensus       186 ~~~~~~y~aP  195 (311)
T cd07866         186 LVVTRWYRPP  195 (311)
T ss_pred             ceeccCcCCh
Confidence            4677888887

Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic

>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3

Probab=99.29  E-value=7.8e-12  Score=75.66  Aligned_cols=69  Identities=14%  Similarity=0.218  Sum_probs=54.7

Q ss_pred             HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCcc---ccccccccccccC
Q psy8010          14 RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDVD---VREILGTPDYVGE   87 (87)
Q Consensus        14 ~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~~---~~~~~gt~~y~aP   87 (87)
                      +.+..++.|++.++  .|+|+.+++|+|++|.|++++.+   ..++++|||++........   .....|++.|+||
T Consensus       100 ~~~~~~~~qi~~al--~~lH~~~i~H~dlkp~nil~~~~---~~~kL~dfg~~~~~~~~~~~~~~~~~~~~~~y~aP  171 (269)
T cd05087         100 TTLQRMACEIALGL--LHLHKNNFIHSDLALRNCLLTAD---LTVKIGDYGLSHNKYKEDYYVTPDQLWVPLRWIAP  171 (269)
T ss_pred             HHHHHHHHHHHHHH--HHHHHCCEeccccCcceEEEcCC---CcEEECCccccccccCcceeecCCCcCCcccccCH
Confidence            35678899999999  99999999999999999999874   7899999999875432221   1234567778887

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells

>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=99.29  E-value=5.9e-12  Score=76.02  Aligned_cols=69  Identities=19%  Similarity=0.396  Sum_probs=56.3

Q ss_pred             HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCC----CccccccccccccccC
Q psy8010          14 RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSR----DVDVREILGTPDYVGE   87 (87)
Q Consensus        14 ~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~----~~~~~~~~gt~~y~aP   87 (87)
                      ..+..++.|++.++  .++|+.+++|+|++|.|++++.+   ..++++|||+++....    ........|+..|+||
T Consensus       106 ~~~~~~~~~i~~al--~~LH~~~i~H~dl~p~ni~i~~~---~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aP  178 (264)
T cd06653         106 NVTRRYTRQILQGV--SYLHSNMIVHRDIKGANILRDSA---GNVKLGDFGASKRIQTICMSGTGIKSVTGTPYWMSP  178 (264)
T ss_pred             HHHHHHHHHHHHHH--HHHHhCCEecCCCCHHHEEEcCC---CCEEECccccccccccccccCccccccCCcccccCH
Confidence            46788999999999  99999999999999999999874   6799999999876522    1122345688888887

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho

>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases

Probab=99.29  E-value=8.5e-12  Score=75.27  Aligned_cols=71  Identities=17%  Similarity=0.263  Sum_probs=54.8

Q ss_pred             cH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCccc---cccccccccccC
Q psy8010          12 IP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDVDV---REILGTPDYVGE   87 (87)
Q Consensus        12 ~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~~~---~~~~gt~~y~aP   87 (87)
                      ++ +.+..++.|++.++  .|+|+.+++|+|++|+|+++..+   ..++++|||+++.+......   ....++..|+||
T Consensus       110 ~~~~~~~~~~~~i~~aL--~~lH~~~i~H~dlkp~Nil~~~~---~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~p  184 (273)
T cd05035         110 LPLQTLLKFMVDIALGM--EYLSNRNFIHRDLAARNCMLRED---MTVCVADFGLSKKIYSGDYYRQGRIAKMPVKWIAI  184 (273)
T ss_pred             CCHHHHHHHHHHHHHHH--HHHHhCCeeccccchheEEECCC---CeEEECCccceeeccccccccccccccCCccccCH
Confidence            44 46788999999999  99999999999999999999874   78999999999876433221   112334556665

Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu

>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases

Probab=99.29  E-value=6.7e-12  Score=76.07  Aligned_cols=72  Identities=25%  Similarity=0.414  Sum_probs=60.1

Q ss_pred             hcH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCC-ccccccccccccccC
Q psy8010          11 RIP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRD-VDVREILGTPDYVGE   87 (87)
Q Consensus        11 ~~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~-~~~~~~~gt~~y~aP   87 (87)
                      +++ +.+..++.|++.++  .++|+.+++|+|++|.|++++.+   ..++++|||++..+... .......|++.|+||
T Consensus        94 ~~~~~~~~~~~~ql~~~l--~~lh~~~i~h~dl~p~ni~i~~~---~~~~l~d~g~~~~~~~~~~~~~~~~~~~~y~~P  167 (274)
T cd06609          94 KLDETYIAFILREVLLGL--EYLHEEGKIHRDIKAANILLSEE---GDVKLADFGVSGQLTSTMSKRNTFVGTPFWMAP  167 (274)
T ss_pred             CCCHHHHHHHHHHHHHHH--HHHHhCCcccCCCCHHHEEECCC---CCEEEcccccceeecccccccccccCCccccCh
Confidence            344 57899999999999  99999999999999999999985   78999999999876543 233456788889887

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)

>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors

Probab=99.29  E-value=7.5e-12  Score=75.67  Aligned_cols=57  Identities=16%  Similarity=0.272  Sum_probs=49.2

Q ss_pred             hhcH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCC
Q psy8010          10 ARIP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSR   71 (87)
Q Consensus        10 ~~~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~   71 (87)
                      ..++ .++..++.|++.++  .++|+.+++|+|++|.|++++.+   ..++++|||++..+..
T Consensus       101 ~~~~~~~~~~i~~~i~~~l--~~lH~~~i~h~dlkp~nili~~~---~~~~l~dfg~~~~~~~  158 (267)
T cd05066         101 GQFTVIQLVGMLRGIASGM--KYLSDMGYVHRDLAARNILVNSN---LVCKVSDFGLSRVLED  158 (267)
T ss_pred             CCCCHHHHHHHHHHHHHHH--HHHHHCCEeehhhchhcEEECCC---CeEEeCCCCccccccc
Confidence            3445 57888999999999  99999999999999999999874   7899999999886643

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul

>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase

Probab=99.29  E-value=7.3e-12  Score=77.76  Aligned_cols=71  Identities=23%  Similarity=0.464  Sum_probs=59.5

Q ss_pred             cH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCc----ccccccccccccc
Q psy8010          12 IP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDV----DVREILGTPDYVG   86 (87)
Q Consensus        12 ~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~----~~~~~~gt~~y~a   86 (87)
                      ++ +.+..++.|++.++  .++|+.|++|+|++|.|+++..+   ..++++|||++.......    ......+++.|+|
T Consensus       100 l~~~~~~~i~~~l~~~l--~~LH~~gi~H~dlkp~nili~~~---~~~~L~dfg~~~~~~~~~~~~~~~~~~~~~~~y~a  174 (330)
T cd07834         100 LTDDHIQYFLYQILRGL--KYLHSANVIHRDLKPSNILVNSN---CDLKICDFGLARGVDPDEDEKGFLTEYVVTRWYRA  174 (330)
T ss_pred             CCHHHHHHHHHHHHHHH--HHHHhCCeecCCCCHHHEEEcCC---CCEEEcccCceEeecccccccccccccccccCcCC
Confidence            44 46788999999999  99999999999999999999985   789999999988764432    2345678888988


Q ss_pred             C
Q psy8010          87 E   87 (87)
Q Consensus        87 P   87 (87)
                      |
T Consensus       175 P  175 (330)
T cd07834         175 P  175 (330)
T ss_pred             c
Confidence            7

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and

>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases

Probab=99.29  E-value=1.2e-11  Score=74.43  Aligned_cols=69  Identities=10%  Similarity=0.198  Sum_probs=53.9

Q ss_pred             HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCccccc--cccccccccC
Q psy8010          14 RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDVDVRE--ILGTPDYVGE   87 (87)
Q Consensus        14 ~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~~~~~--~~gt~~y~aP   87 (87)
                      +.+..++.|++.++  .++|+.+++|+|++|+|++++.+   ..++++|||++...........  ..++..|+||
T Consensus       103 ~~~~~~~~~i~~~l--~~lH~~~i~H~dl~p~Nil~~~~---~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~aP  173 (261)
T cd05068         103 PQLIDMAAQVASGM--AYLEAQNYIHRDLAARNVLVGEN---NICKVADFGLARVIKEDIYEAREGAKFPIKWTAP  173 (261)
T ss_pred             HHHHHHHHHHHHHH--HHHHhCCeeeccCCcceEEEcCC---CCEEECCcceEEEccCCcccccCCCcCceeccCc
Confidence            57888999999999  99999999999999999999985   7899999999887643221111  1123457776

Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a

>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase

Probab=99.29  E-value=1.2e-11  Score=74.87  Aligned_cols=72  Identities=17%  Similarity=0.188  Sum_probs=55.7

Q ss_pred             hcH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCccc--cccccccccccC
Q psy8010          11 RIP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDVDV--REILGTPDYVGE   87 (87)
Q Consensus        11 ~~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~~~--~~~~gt~~y~aP   87 (87)
                      .++ ..+..++.|++.++  .++|+.+++|+|++|.|++++..   ..++++|||++.........  ....+++.|+||
T Consensus       103 ~~~~~~~~~~~~~l~~~l--~~lH~~~~~H~dl~p~nili~~~---~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~y~aP  177 (270)
T cd05056         103 SLDLASLILYSYQLSTAL--AYLESKRFVHRDIAARNVLVSSP---DCVKLGDFGLSRYLEDESYYKASKGKLPIKWMAP  177 (270)
T ss_pred             CCCHHHHHHHHHHHHHHH--HHHHhCCeeccccChheEEEecC---CCeEEccCceeeecccccceecCCCCccccccCh
Confidence            345 47788899999999  99999999999999999999985   78999999998765433221  122334567776

Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions

>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase

Probab=99.29  E-value=9.5e-12  Score=74.65  Aligned_cols=71  Identities=15%  Similarity=0.303  Sum_probs=56.4

Q ss_pred             cH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCccc----ccccccccccc
Q psy8010          12 IP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDVDV----REILGTPDYVG   86 (87)
Q Consensus        12 ~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~~~----~~~~gt~~y~a   86 (87)
                      ++ +.+..++.|++.++  .++|..+++|+|++|.|++++.+   ..++++|||++..+......    ....++..|+|
T Consensus        94 ~~~~~~~~~~~qi~~~L--~~lH~~~i~H~di~p~nil~~~~---~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~~  168 (257)
T cd05040          94 FLISTLCDYAVQIANGM--RYLESKRFIHRDLAARNILLASD---DKVKIGDFGLMRALPQNEDHYVMEEHLKVPFAWCA  168 (257)
T ss_pred             CcHHHHHHHHHHHHHHH--HHHHhCCccccccCcccEEEecC---CEEEeccccccccccccccceecccCCCCCceecC
Confidence            44 57888999999999  99999999999999999999985   78999999998876432211    12345667877


Q ss_pred             C
Q psy8010          87 E   87 (87)
Q Consensus        87 P   87 (87)
                      |
T Consensus       169 p  169 (257)
T cd05040         169 P  169 (257)
T ss_pred             H
Confidence            6

Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and

>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors

Probab=99.29  E-value=7.2e-12  Score=77.27  Aligned_cols=71  Identities=17%  Similarity=0.297  Sum_probs=56.4

Q ss_pred             cH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCcc---ccccccccccccC
Q psy8010          12 IP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDVD---VREILGTPDYVGE   87 (87)
Q Consensus        12 ~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~~---~~~~~gt~~y~aP   87 (87)
                      ++ +++..++.|++.++  .|+|+++++|+|++|.|++++.+   ..++++|||++..+.....   .....+++.|+||
T Consensus       138 l~~~~~~~i~~~i~~~l--~~lH~~~ivH~dlkp~Nil~~~~---~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aP  212 (302)
T cd05055         138 LTLEDLLSFSYQVAKGM--AFLASKNCIHRDLAARNVLLTHG---KIVKICDFGLARDIMNDSNYVVKGNARLPVKWMAP  212 (302)
T ss_pred             CCHHHHHHHHHHHHHHH--HHHHHCCeehhhhccceEEEcCC---CeEEECCCcccccccCCCceeecCCCCcccccCCH
Confidence            45 57888999999999  99999999999999999999874   7899999999886543221   1223456778887

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept

>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors

Probab=99.29  E-value=8.5e-12  Score=75.43  Aligned_cols=62  Identities=16%  Similarity=0.272  Sum_probs=50.7

Q ss_pred             HHHHHhhhcH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecC
Q psy8010           4 FIITLVARIP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLS   70 (87)
Q Consensus         4 ~~~~~~~~~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~   70 (87)
                      +++...+.++ ..+..++.|++.++  .++|+++++|+|++|.|++++.+   ..++++|||++....
T Consensus        95 ~l~~~~~~~~~~~~~~i~~~l~~al--~~lH~~g~~H~dl~p~nili~~~---~~~kl~dfg~~~~~~  157 (269)
T cd05065          95 FLRQNDGQFTVIQLVGMLRGIAAGM--KYLSEMNYVHRDLAARNILVNSN---LVCKVSDFGLSRFLE  157 (269)
T ss_pred             HHhhCCCCCCHHHHHHHHHHHHHHH--HHHHHCCEeecccChheEEEcCC---CcEEECCCccccccc
Confidence            3333333445 57888999999999  99999999999999999999874   789999999887553

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr

>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85

Probab=99.29  E-value=7.1e-12  Score=76.13  Aligned_cols=71  Identities=25%  Similarity=0.375  Sum_probs=57.3

Q ss_pred             cH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCc-cccccccccccccC
Q psy8010          12 IP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDV-DVREILGTPDYVGE   87 (87)
Q Consensus        12 ~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~-~~~~~~gt~~y~aP   87 (87)
                      ++ +.+..++.|++.++  .++|+.+++|+|++|.|+++..+   ..++++|||++....... ......+++.|++|
T Consensus        97 ~~~~~~~~~~~qi~~~l--~~lH~~~i~h~dl~p~ni~~~~~---~~~~l~d~g~~~~~~~~~~~~~~~~~~~~y~~P  169 (284)
T cd07836          97 LDPNTVKSFTYQLLKGI--AFCHENRVLHRDLKPQNLLINKR---GELKLADFGLARAFGIPVNTFSNEVVTLWYRAP  169 (284)
T ss_pred             cCHHHHHHHHHHHHHHH--HHHHHCCeeeCCCCHHHEEECCC---CcEEEeecchhhhhcCCccccccccccccccCh
Confidence            45 57889999999999  99999999999999999999874   789999999887553322 12334667788877

Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.

>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors

Probab=99.29  E-value=8.1e-12  Score=76.33  Aligned_cols=69  Identities=12%  Similarity=0.188  Sum_probs=54.5

Q ss_pred             HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCccc---cccccccccccC
Q psy8010          14 RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDVDV---REILGTPDYVGE   87 (87)
Q Consensus        14 ~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~~~---~~~~gt~~y~aP   87 (87)
                      +.+..++.|++.++  .|+|+.+++|+|++|.|++++.+   ..++++|||+++.+......   ....++..|+||
T Consensus       132 ~~~~~i~~qi~~al--~~LH~~~ivH~dlkp~Nil~~~~---~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aP  203 (293)
T cd05053         132 KDLVSFAYQVARGM--EFLASKKCIHRDLAARNVLVTED---HVMKIADFGLARDIHHIDYYRKTTNGRLPVKWMAP  203 (293)
T ss_pred             HHHHHHHHHHHHHH--HHHHHCCccccccceeeEEEcCC---CeEEeCccccccccccccceeccCCCCCCccccCH
Confidence            46788999999999  99999999999999999999874   78999999998865432211   122345568776

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,

>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase

Probab=99.29  E-value=8.1e-12  Score=78.37  Aligned_cols=69  Identities=22%  Similarity=0.460  Sum_probs=57.3

Q ss_pred             cH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCccccccccccccccC
Q psy8010          12 IP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDVDVREILGTPDYVGE   87 (87)
Q Consensus        12 ~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~~~~~~~gt~~y~aP   87 (87)
                      ++ +.+..++.|++.|+  .|+|+.+++|+|++|.|++++.+   ..++++|||++.....  ......|++.|+||
T Consensus       117 l~~~~~~~i~~qi~~aL--~~LH~~~ivH~dlkp~NIll~~~---~~~kl~dfg~~~~~~~--~~~~~~~~~~y~aP  186 (345)
T cd07877         117 LTDDHVQFLIYQILRGL--KYIHSADIIHRDLKPSNLAVNED---CELKILDFGLARHTDD--EMTGYVATRWYRAP  186 (345)
T ss_pred             CCHHHHHHHHHHHHHHH--HHHHHCCeeecCCChHHEEEcCC---CCEEEecccccccccc--cccccccCCCccCH
Confidence            44 47788999999999  99999999999999999999885   7899999999876432  22345778888887

Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14

>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases

Probab=99.29  E-value=8.2e-12  Score=75.27  Aligned_cols=72  Identities=18%  Similarity=0.355  Sum_probs=57.2

Q ss_pred             hcH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCc-------ccccccccc
Q psy8010          11 RIP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDV-------DVREILGTP   82 (87)
Q Consensus        11 ~~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~-------~~~~~~gt~   82 (87)
                      .++ ..+..++.|++.++  .++|+.+++|+|++|+|++++.+   ..++++|||.++......       ......|++
T Consensus       102 ~l~~~~~~~~~~~l~~~l--~~lH~~~ivH~di~p~nil~~~~---~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~  176 (267)
T cd06628         102 AFEETLVRNFVRQILKGL--NYLHNRGIIHRDIKGANILVDNK---GGIKISDFGISKKLEANSLSTKTNGARPSLQGSV  176 (267)
T ss_pred             CccHHHHHHHHHHHHHHH--HHHHhcCcccccCCHHHEEEcCC---CCEEecccCCCcccccccccCCccccccccCCCc
Confidence            345 46788999999999  99999999999999999999874   789999999987653211       112346778


Q ss_pred             ccccC
Q psy8010          83 DYVGE   87 (87)
Q Consensus        83 ~y~aP   87 (87)
                      .|+||
T Consensus       177 ~y~~p  181 (267)
T cd06628         177 FWMAP  181 (267)
T ss_pred             CccCh
Confidence            88887

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate

>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1

Probab=99.29  E-value=9.9e-12  Score=74.68  Aligned_cols=72  Identities=19%  Similarity=0.375  Sum_probs=59.0

Q ss_pred             hcH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCccccccccccccccC
Q psy8010          11 RIP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDVDVREILGTPDYVGE   87 (87)
Q Consensus        11 ~~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~~~~~~~gt~~y~aP   87 (87)
                      .++ +.+..++.|++.++  .++|..+++|+|++|.|++++.+   ..++++|||.+.............|+..|+||
T Consensus        96 ~l~~~~~~~~~~~i~~~l--~~lh~~~i~h~dl~~~nil~~~~---~~~~l~d~~~~~~~~~~~~~~~~~~~~~y~~P  168 (258)
T cd05578          96 KFSEEQVKFWICEIVLAL--EYLHSKGIIHRDIKPDNILLDEQ---GHVHITDFNIATKVTPDTLTTSTSGTPGYMAP  168 (258)
T ss_pred             CcCHHHHHHHHHHHHHHH--HHHHhCCeeccCCCHHHeEEcCC---CCEEEeecccccccCCCccccccCCChhhcCH
Confidence            344 57888999999999  99999999999999999999885   78999999998776544333445677778776

Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.

>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=99.28  E-value=1.2e-11  Score=75.33  Aligned_cols=74  Identities=19%  Similarity=0.216  Sum_probs=54.9

Q ss_pred             hhhcH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCC----CCCcEEEEeeccceecCCCccccccccccc
Q psy8010           9 VARIP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEY----PDCDVKLCDFGISRHLSRDVDVREILGTPD   83 (87)
Q Consensus         9 ~~~~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~----~~~~~kl~dfg~~~~~~~~~~~~~~~gt~~   83 (87)
                      .+.++ +.+..++.|++.++  .|+|+++++|+|++|.|++++..+    ....++++|||.+......   ....+++.
T Consensus       111 ~~~~~~~~~~~i~~qi~~~l--~~lH~~~iiH~dlkp~Nill~~~~~~~~~~~~~kl~d~g~~~~~~~~---~~~~~~~~  185 (274)
T cd05076         111 KGRVPVAWKITVAQQLASAL--SYLEDKNLVHGNVCAKNILLARLGLAEGTSPFIKLSDPGVSFTALSR---EERVERIP  185 (274)
T ss_pred             CCCCCHHHHHHHHHHHHHHH--HHHHcCCccCCCCCcccEEEeccCcccCccceeeecCCccccccccc---cccccCCc
Confidence            34455 57888999999999  999999999999999999997532    1234899999987654222   12245666


Q ss_pred             cccC
Q psy8010          84 YVGE   87 (87)
Q Consensus        84 y~aP   87 (87)
                      |+||
T Consensus       186 ~~aP  189 (274)
T cd05076         186 WIAP  189 (274)
T ss_pred             ccCc
Confidence            7776

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt

>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes

Probab=99.28  E-value=1.2e-11  Score=74.51  Aligned_cols=69  Identities=9%  Similarity=0.188  Sum_probs=54.5

Q ss_pred             HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCccc--cccccccccccC
Q psy8010          14 RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDVDV--REILGTPDYVGE   87 (87)
Q Consensus        14 ~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~~~--~~~~gt~~y~aP   87 (87)
                      +.+..++.|++.++  .|+|+.+++|+|++|.|++++.+   ..++++|||++.........  ....++..|+||
T Consensus       102 ~~~~~~~~~l~~al--~~lH~~~i~H~dl~~~Nill~~~---~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~~P  172 (260)
T cd05069         102 PQLVDMAAQIADGM--AYIERMNYIHRDLRAANILVGDN---LVCKIADFGLARLIEDNEYTARQGAKFPIKWTAP  172 (260)
T ss_pred             HHHHHHHHHHHHHH--HHHHhCCEeecccCcceEEEcCC---CeEEECCCccceEccCCcccccCCCccchhhCCH
Confidence            46788999999999  99999999999999999999874   78999999998765332211  123445567776

Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an

>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes

Probab=99.28  E-value=1e-11  Score=74.43  Aligned_cols=54  Identities=15%  Similarity=0.276  Sum_probs=47.6

Q ss_pred             cH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecC
Q psy8010          12 IP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLS   70 (87)
Q Consensus        12 ~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~   70 (87)
                      ++ +.+..++.|++.++  .|+|+.+++|+|++|.|++++.+   ..++++|||++....
T Consensus        91 ~~~~~~~~~~~qi~~~L--~~lH~~~i~H~dl~p~nil~~~~---~~~kl~dfg~~~~~~  145 (252)
T cd05084          91 LKVKELIQMVENAAAGM--EYLESKHCIHRDLAARNCLVTEK---NVLKISDFGMSREEE  145 (252)
T ss_pred             CCHHHHHHHHHHHHHHH--HHHHhCCccccccchheEEEcCC---CcEEECccccCcccc
Confidence            44 47888999999999  99999999999999999999874   679999999987543

Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular

>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases

Probab=99.28  E-value=1.1e-11  Score=74.55  Aligned_cols=68  Identities=24%  Similarity=0.446  Sum_probs=55.8

Q ss_pred             cH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCccccccccccccccC
Q psy8010          12 IP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDVDVREILGTPDYVGE   87 (87)
Q Consensus        12 ~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~~~~~~~gt~~y~aP   87 (87)
                      ++ +.+..++.|++.++  .++|+.+++|+|++|.|++++.+   ..++++|||++.....   .....|++.|+||
T Consensus        94 ~~~~~~~~i~~qi~~aL--~~lH~~~i~H~dl~p~nil~~~~---~~~~l~dfg~~~~~~~---~~~~~~~~~y~~p  162 (260)
T cd05611          94 LPEDWAKQYIAEVVLGV--EDLHQRGIIHRDIKPENLLIDQT---GHLKLTDFGLSRNGLE---NKKFVGTPDYLAP  162 (260)
T ss_pred             CCHHHHHHHHHHHHHHH--HHHHHCCeecCCCCHHHeEECCC---CcEEEeecccceeccc---cccCCCCcCccCh
Confidence            44 57889999999999  99999999999999999999874   7899999998875432   2234567777776

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do

>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase

Probab=99.28  E-value=7.2e-12  Score=78.47  Aligned_cols=70  Identities=21%  Similarity=0.428  Sum_probs=57.8

Q ss_pred             hcH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCccccccccccccccC
Q psy8010          11 RIP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDVDVREILGTPDYVGE   87 (87)
Q Consensus        11 ~~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~~~~~~~gt~~y~aP   87 (87)
                      .++ +.+..++.|++.++  .++|+.+++|+|++|.|++++.+   ..++++|||++.....  ......|++.|+||
T Consensus       113 ~~~~~~~~~~~~qi~~aL--~~LH~~~i~H~dlkp~NIll~~~---~~~kL~dfg~~~~~~~--~~~~~~~~~~y~aP  183 (342)
T cd07879         113 PLSEDKVQYLVYQMLCGL--KYIHSAGIIHRDLKPGNLAVNED---CELKILDFGLARHADA--EMTGYVVTRWYRAP  183 (342)
T ss_pred             CCCHHHHHHHHHHHHHHH--HHHHHCCcccCCCCHHHEEECCC---CCEEEeeCCCCcCCCC--CCCCceeeecccCh
Confidence            455 57888999999999  99999999999999999999885   7899999999875422  22345778888887

Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13

>KOG4257|consensus

Probab=99.28  E-value=4.5e-12  Score=84.65  Aligned_cols=79  Identities=19%  Similarity=0.327  Sum_probs=64.0

Q ss_pred             HHHHHhhhcH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCcccccccc--
Q psy8010           4 FIITLVARIP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDVDVREILG--   80 (87)
Q Consensus         4 ~~~~~~~~~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~~~~~~~g--   80 (87)
                      |+.+-...++ .....++.|++.++  .|+++.+++|||+...|+++..+   ..+|+.|||+++.+.++..+....|  
T Consensus       480 yLq~nk~sL~l~tL~ly~~Qi~tal--aYLeSkrfVHRDIAaRNiLVsSp---~CVKLaDFGLSR~~ed~~yYkaS~~kL  554 (974)
T KOG4257|consen  480 YLQQNKDSLPLRTLTLYCYQICTAL--AYLESKRFVHRDIAARNILVSSP---QCVKLADFGLSRYLEDDAYYKASRGKL  554 (974)
T ss_pred             HHHhccccchHHHHHHHHHHHHHHH--HHHHhhchhhhhhhhhheeecCc---ceeeecccchhhhccccchhhcccccc
Confidence            4444445566 57889999999999  99999999999999999999996   7899999999998876665544344  


Q ss_pred             ccccccC
Q psy8010          81 TPDYVGE   87 (87)
Q Consensus        81 t~~y~aP   87 (87)
                      ...||||
T Consensus       555 PIKWmaP  561 (974)
T KOG4257|consen  555 PIKWMAP  561 (974)
T ss_pred             ceeecCc
Confidence            3458887

>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3

Probab=99.28  E-value=1e-11  Score=74.99  Aligned_cols=69  Identities=23%  Similarity=0.399  Sum_probs=55.5

Q ss_pred             HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCC----ccccccccccccccC
Q psy8010          14 RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRD----VDVREILGTPDYVGE   87 (87)
Q Consensus        14 ~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~----~~~~~~~gt~~y~aP   87 (87)
                      .....++.|++.++  .++|+.+++|+|++|.|++++.+   ..++++|||++..+...    .......|+..|+||
T Consensus       106 ~~~~~~~~qi~~~l--~~LH~~~i~H~~l~p~nil~~~~---~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aP  178 (266)
T cd06651         106 SVTRKYTRQILEGM--SYLHSNMIVHRDIKGANILRDSA---GNVKLGDFGASKRLQTICMSGTGIRSVTGTPYWMSP  178 (266)
T ss_pred             HHHHHHHHHHHHHH--HHHHhCCeeeCCCCHHHEEECCC---CCEEEccCCCccccccccccCCccccCCccccccCH
Confidence            46778899999999  99999999999999999999874   78999999998765321    112334678888887

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development

>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1

Probab=99.28  E-value=9.5e-12  Score=75.77  Aligned_cols=69  Identities=14%  Similarity=0.245  Sum_probs=54.5

Q ss_pred             HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCc---cccccccccccccC
Q psy8010          14 RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDV---DVREILGTPDYVGE   87 (87)
Q Consensus        14 ~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~---~~~~~~gt~~y~aP   87 (87)
                      +.+..++.|++.++  .|+|+++++|+|++|.|++++..   ..++++|||++.......   ......++..|+||
T Consensus       124 ~~~~~i~~~i~~al--~~lH~~~i~H~dlkp~nili~~~---~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aP  195 (283)
T cd05090         124 GDFLHIAIQIAAGM--EYLSSHFFVHKDLAARNILIGEQ---LHVKISDLGLSREIYSADYYRVQPKSLLPIRWMPP  195 (283)
T ss_pred             HHHHHHHHHHHHHH--HHHHhcCeehhccccceEEEcCC---CcEEeccccccccccCCcceecccCCCccceecCh
Confidence            46778899999999  99999999999999999999874   679999999987653322   11233455668776

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3

Probab=99.28  E-value=1.2e-11  Score=77.21  Aligned_cols=69  Identities=10%  Similarity=0.172  Sum_probs=54.2

Q ss_pred             HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCccc---cccccccccccC
Q psy8010          14 RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDVDV---REILGTPDYVGE   87 (87)
Q Consensus        14 ~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~~~---~~~~gt~~y~aP   87 (87)
                      .....++.|++.++  .|+|+.+++|+|++|.|++++.+   ..++++|||+++........   ....++..|+||
T Consensus       134 ~~~~~~~~qi~~al--~~LH~~givH~dlkp~Nill~~~---~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aP  205 (334)
T cd05100         134 KDLVSCAYQVARGM--EYLASQKCIHRDLAARNVLVTED---NVMKIADFGLARDVHNIDYYKKTTNGRLPVKWMAP  205 (334)
T ss_pred             HHHHHHHHHHHHHH--HHHHHCCeeccccccceEEEcCC---CcEEECCcccceecccccccccccCCCcCceEcCH
Confidence            45677899999999  99999999999999999999875   78999999998865432211   222334568887

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>KOG3653|consensus

Probab=99.28  E-value=1e-11  Score=80.20  Aligned_cols=69  Identities=13%  Similarity=0.272  Sum_probs=57.2

Q ss_pred             HHHHHHHHHHHHHHHHHHhhh---------CCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCccc---cccccc
Q psy8010          14 RLVAKVTVTLLGSLNHHFTST---------HSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDVDV---REILGT   81 (87)
Q Consensus        14 ~~~~~~~~q~~~~l~~~~~h~---------~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~~~---~~~~gt   81 (87)
                      ..+..++.-+..|+  .|+|+         -.|.|||+|..|+++..+   ....|+|||+|.++..+...   ...+||
T Consensus       307 ~~~cria~SmarGL--a~LHee~p~~d~~Kp~IaHRDlkSkNVLvK~D---lTccIaDFGLAl~~~p~~~~~d~~~qVGT  381 (534)
T KOG3653|consen  307 NSLCRIAESMARGL--AHLHEELPRGDHHKPPIAHRDLKSKNVLVKND---LTCCIADFGLALRLEPGKPQGDTHGQVGT  381 (534)
T ss_pred             HHHHHHHHHHHHHH--HHhcccCCcCCCCCCccccccccccceEEccC---CcEEeeccceeEEecCCCCCcchhhhhhh
Confidence            35777888888999  99997         258999999999999985   78999999999988554432   236999


Q ss_pred             cccccC
Q psy8010          82 PDYVGE   87 (87)
Q Consensus        82 ~~y~aP   87 (87)
                      ..||||
T Consensus       382 ~RYMAP  387 (534)
T KOG3653|consen  382 RRYMAP  387 (534)
T ss_pred             hhhcCH
Confidence            999998

>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1

Probab=99.28  E-value=5.9e-12  Score=77.42  Aligned_cols=69  Identities=23%  Similarity=0.406  Sum_probs=57.0

Q ss_pred             HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCc-cccccccccccccC
Q psy8010          14 RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDV-DVREILGTPDYVGE   87 (87)
Q Consensus        14 ~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~-~~~~~~gt~~y~aP   87 (87)
                      .++..++.|++.++  .++|..+++|+|++|.|++++.+   ..++++|||++....... ......|++.|+||
T Consensus       116 ~~~~~i~~ql~~aL--~~LH~~gi~H~dLkp~Nill~~~---~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aP  185 (296)
T cd06654         116 GQIAAVCRECLQAL--EFLHSNQVIHRDIKSDNILLGMD---GSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAP  185 (296)
T ss_pred             HHHHHHHHHHHHHH--HHHHHCCcccCCCCHHHEEEcCC---CCEEECccccchhccccccccCcccCCccccCH
Confidence            47788999999999  99999999999999999999874   689999999887653322 22345788889887

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases

Probab=99.28  E-value=1e-11  Score=73.70  Aligned_cols=72  Identities=28%  Similarity=0.469  Sum_probs=59.0

Q ss_pred             hcH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCccccccccccccccC
Q psy8010          11 RIP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDVDVREILGTPDYVGE   87 (87)
Q Consensus        11 ~~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~~~~~~~gt~~y~aP   87 (87)
                      .++ +.+..++.|++.++  .++|..+++|+|++|.|++++.+   ..++++|||.+.............|+..|++|
T Consensus        94 ~~~~~~~~~i~~~i~~~l--~~lh~~~i~h~dl~p~ni~i~~~---~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~P  166 (253)
T cd05122          94 TLTESQIAYVCKELLKGL--EYLHSNGIIHRDIKAANILLTSD---GEVKLIDFGLSAQLSDTKARNTMVGTPYWMAP  166 (253)
T ss_pred             CCCHHHHHHHHHHHHHHH--HHhhcCCEecCCCCHHHEEEccC---CeEEEeeccccccccccccccceecCCcccCH
Confidence            344 57888999999999  99999999999999999999984   78999999998776544323445677788876

Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core

>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins

Probab=99.28  E-value=1.4e-11  Score=73.67  Aligned_cols=69  Identities=14%  Similarity=0.181  Sum_probs=55.2

Q ss_pred             cH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCccccccccccccccC
Q psy8010          12 IP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDVDVREILGTPDYVGE   87 (87)
Q Consensus        12 ~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~~~~~~~gt~~y~aP   87 (87)
                      ++ +.+..++.|++.++  .++|+.+++|+|++|+|++++.+   ..+++.|||.+......  .....++..|+||
T Consensus        82 l~~~~~~~~~~ql~~~l--~~lH~~~i~H~dlkp~Nil~~~~---~~~~l~df~~~~~~~~~--~~~~~~~~~y~aP  151 (237)
T cd05576          82 IPEECVKRWAAEMVVAL--DALHREGIVCRDLNPNNILLDDR---GHIQLTYFSRWSEVEDS--CDGEAVENMYCAP  151 (237)
T ss_pred             CCHHHHHHHHHHHHHHH--HHHHhCCeeccCCCHHHEEEcCC---CCEEEecccchhccccc--cccCCcCccccCC
Confidence            44 57889999999999  99999999999999999999885   77999999977654322  2233456667776

Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha

>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases

Probab=99.28  E-value=8.5e-12  Score=75.57  Aligned_cols=69  Identities=12%  Similarity=0.210  Sum_probs=55.5

Q ss_pred             HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCcc---ccccccccccccC
Q psy8010          14 RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDVD---VREILGTPDYVGE   87 (87)
Q Consensus        14 ~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~~---~~~~~gt~~y~aP   87 (87)
                      ..+..++.|++.++  .|+|+.+++|+|++|.|++++.+   ..++++|||+++.+.....   .....++..|+||
T Consensus       119 ~~~~~~~~~i~~~l--~~lH~~~i~H~di~p~nill~~~---~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aP  190 (277)
T cd05032         119 QKFIQMAAEIADGM--AYLAAKKFVHRDLAARNCMVAED---LTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAP  190 (277)
T ss_pred             HHHHHHHHHHHHHH--HHHHhCCccccccChheEEEcCC---CCEEECCcccchhhccCcccccCCCCCccccccCH
Confidence            36778899999999  99999999999999999999985   7899999999876533221   1234556778877

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological

>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3

Probab=99.27  E-value=7.9e-12  Score=76.88  Aligned_cols=69  Identities=23%  Similarity=0.406  Sum_probs=57.2

Q ss_pred             HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCcc-ccccccccccccC
Q psy8010          14 RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDVD-VREILGTPDYVGE   87 (87)
Q Consensus        14 ~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~~-~~~~~gt~~y~aP   87 (87)
                      ..+..++.|++.++  .++|+.+++|+|++|.|++++.+   ..++++|||++........ .....|++.|+||
T Consensus       115 ~~~~~~~~~l~~~L--~~LH~~~i~H~dL~p~Nili~~~---~~~~l~Dfg~~~~~~~~~~~~~~~~~~~~y~aP  184 (297)
T cd06656         115 GQIAAVCRECLQAL--DFLHSNQVIHRDIKSDNILLGMD---GSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAP  184 (297)
T ss_pred             HHHHHHHHHHHHHH--HHHHHCCcccCCCCHHHEEECCC---CCEEECcCccceEccCCccCcCcccCCccccCH
Confidence            47788999999999  99999999999999999999874   7899999999876543322 2345778888887

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5

Probab=99.27  E-value=9e-12  Score=77.71  Aligned_cols=71  Identities=23%  Similarity=0.447  Sum_probs=58.3

Q ss_pred             cH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCcc-----ccccccccccc
Q psy8010          12 IP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDVD-----VREILGTPDYV   85 (87)
Q Consensus        12 ~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~~-----~~~~~gt~~y~   85 (87)
                      ++ ..+..++.|++.++  .++|..+++|+|++|.|++++.+   ..++++|||++..+.....     .....|+..|+
T Consensus       104 ~~~~~~~~i~~qi~~aL--~~LH~~~ivH~dlkp~Nil~~~~---~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~y~  178 (334)
T cd07855         104 LTEEHIRYFLYQLLRGL--KYIHSANVIHRDLKPSNLLVNED---CELRIGDFGMARGLSSSPTEHKYFMTEYVATRWYR  178 (334)
T ss_pred             CCHHHHHHHHHHHHHHH--HHHHHCCeecCCCCHHHEEEcCC---CcEEecccccceeecccCcCCCccccccccccccc
Confidence            44 57899999999999  99999999999999999999885   7899999999886532211     13457888888


Q ss_pred             cC
Q psy8010          86 GE   87 (87)
Q Consensus        86 aP   87 (87)
                      ||
T Consensus       179 ~P  180 (334)
T cd07855         179 AP  180 (334)
T ss_pred             Ch
Confidence            87

Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the

>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases

Probab=99.27  E-value=9.4e-12  Score=75.48  Aligned_cols=72  Identities=18%  Similarity=0.284  Sum_probs=58.3

Q ss_pred             hcH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCc--cccccccccccccC
Q psy8010          11 RIP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDV--DVREILGTPDYVGE   87 (87)
Q Consensus        11 ~~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~--~~~~~~gt~~y~aP   87 (87)
                      .++ +.+..++.|++.++  .++|..+++|+|++|.|++++.+   ..++++|||++.......  ......+++.|+||
T Consensus        96 ~~~~~~~~~i~~~i~~al--~~LH~~~~~h~dl~p~nil~~~~---~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~y~~P  170 (287)
T cd07840          96 KFTESQIKCYMKQLLEGL--QYLHSNGILHRDIKGSNILINND---GVLKLADFGLARPYTKRNSADYTNRVITLWYRPP  170 (287)
T ss_pred             CCCHHHHHHHHHHHHHHH--HHHHHCCceeccCcHHHeEEcCC---CCEEEccccceeeccCCCcccccccccccccCCc
Confidence            344 47889999999999  99999999999999999999985   789999999988764332  22334567778887

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po

>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase

Probab=99.27  E-value=1.4e-11  Score=76.12  Aligned_cols=72  Identities=28%  Similarity=0.643  Sum_probs=57.8

Q ss_pred             hhcH-HHHHHHHHHHHHHHHHHHhhh-CCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCccccccccccccccC
Q psy8010          10 ARIP-RLVAKVTVTLLGSLNHHFTST-HSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDVDVREILGTPDYVGE   87 (87)
Q Consensus        10 ~~~~-~~~~~~~~q~~~~l~~~~~h~-~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~~~~~~~gt~~y~aP   87 (87)
                      +.++ ..+..++.|++.++  .|+|+ .+++|+|++|.|++++.+   ..++++|||++...... ......|++.|+||
T Consensus        94 ~~~~~~~~~~~~~~i~~~l--~~lH~~~~i~H~dl~p~nil~~~~---~~~~l~dfg~~~~~~~~-~~~~~~~~~~~~aP  167 (308)
T cd06615          94 GRIPENILGKISIAVLRGL--TYLREKHKIMHRDVKPSNILVNSR---GEIKLCDFGVSGQLIDS-MANSFVGTRSYMSP  167 (308)
T ss_pred             CCCCHHHHHHHHHHHHHHH--HHHHhhCCEEECCCChHHEEEecC---CcEEEccCCCccccccc-ccccCCCCcCccCh
Confidence            3455 47889999999999  99997 699999999999999874   67999999988765332 22345788888887

Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down

>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases

Probab=99.27  E-value=1.9e-11  Score=74.07  Aligned_cols=72  Identities=22%  Similarity=0.389  Sum_probs=57.6

Q ss_pred             hcH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCc-cccccccccccccC
Q psy8010          11 RIP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDV-DVREILGTPDYVGE   87 (87)
Q Consensus        11 ~~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~-~~~~~~gt~~y~aP   87 (87)
                      .++ ..+..++.|++.++  .++|+.+++|+|++|.|++++.+   ..++++|||.+....... ......++..|+||
T Consensus        94 ~~~~~~~~~~~~~i~~~l--~~LH~~~i~H~~l~~~ni~~~~~---~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~~aP  167 (282)
T cd07829          94 PLSPNLIKSIMYQLLRGL--AYCHSHRILHRDLKPQNILINRD---GVLKLADFGLARAFGIPLRTYTHEVVTLWYRAP  167 (282)
T ss_pred             CCCHHHHHHHHHHHHHHH--HHHHHCCcccCCCChheEEEcCC---CCEEEecCCcccccCCCccccCccccCcCcCCh
Confidence            344 57888999999999  99999999999999999999985   789999999987654332 22334556778876

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the

>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn

Probab=99.27  E-value=1.4e-11  Score=74.15  Aligned_cols=69  Identities=9%  Similarity=0.177  Sum_probs=54.8

Q ss_pred             HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCccc--cccccccccccC
Q psy8010          14 RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDVDV--REILGTPDYVGE   87 (87)
Q Consensus        14 ~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~~~--~~~~gt~~y~aP   87 (87)
                      +....++.|++.++  .|+|..+++|+|++|.|++++..   ..+++.|||++.........  ....++..|+||
T Consensus       103 ~~~~~~~~~l~~~l--~~LH~~~i~H~dl~p~nili~~~---~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~aP  173 (261)
T cd05072         103 PKLIDFSAQIAEGM--AYIERKNYIHRDLRAANVLVSES---LMCKIADFGLARVIEDNEYTAREGAKFPIKWTAP  173 (261)
T ss_pred             HHHHHHHHHHHHHH--HHHHHCCeeccccchhhEEecCC---CcEEECCCccceecCCCceeccCCCccceecCCH
Confidence            46778899999999  99999999999999999999885   78999999999876432211  223445668776

Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa

>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6

Probab=99.27  E-value=7.6e-12  Score=76.09  Aligned_cols=69  Identities=29%  Similarity=0.463  Sum_probs=56.4

Q ss_pred             HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCC-ccccccccccccccC
Q psy8010          14 RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRD-VDVREILGTPDYVGE   87 (87)
Q Consensus        14 ~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~-~~~~~~~gt~~y~aP   87 (87)
                      +.+..++.|++.++  .|+|+.+++|+|++|.|+++..+   ..++++|||++...... .......|++.|+||
T Consensus       121 ~~~~~~~~qi~~al--~~LH~~~ivH~dl~~~nili~~~---~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~aP  190 (282)
T cd06636         121 DWIAYICREILRGL--AHLHAHKVIHRDIKGQNVLLTEN---AEVKLVDFGVSAQLDRTVGRRNTFIGTPYWMAP  190 (282)
T ss_pred             HHHHHHHHHHHHHH--HHHHHCCcccCCCCHHHEEECCC---CCEEEeeCcchhhhhccccCCCcccccccccCH
Confidence            45788899999999  99999999999999999999975   77999999988754321 122345788888887

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea

>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor

Probab=99.27  E-value=1.2e-11  Score=75.64  Aligned_cols=69  Identities=12%  Similarity=0.224  Sum_probs=53.9

Q ss_pred             HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCccc---cccccccccccC
Q psy8010          14 RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDVDV---REILGTPDYVGE   87 (87)
Q Consensus        14 ~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~~~---~~~~gt~~y~aP   87 (87)
                      +.+..++.|++.++  .|+|+++++|+|++|+|++++.+   ..++++|||+++.+......   ....++..|+||
T Consensus       119 ~~~~~~~~~l~~~l--~~lH~~~i~H~dikp~nili~~~---~~~~L~Dfg~~~~~~~~~~~~~~~~~~~~~~y~~p  190 (288)
T cd05061         119 QEMIQMAAEIADGM--AYLNAKKFVHRDLAARNCMVAHD---FTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAP  190 (288)
T ss_pred             HHHHHHHHHHHHHH--HHHHhCCCcCCCCChheEEEcCC---CcEEECcCCccccccccccccccCCCcccccccCH
Confidence            35778899999999  99999999999999999999874   78999999998765322211   122445668776

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta

>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer

Probab=99.27  E-value=1.5e-11  Score=73.51  Aligned_cols=69  Identities=12%  Similarity=0.169  Sum_probs=53.5

Q ss_pred             HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCccc--cccccccccccC
Q psy8010          14 RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDVDV--REILGTPDYVGE   87 (87)
Q Consensus        14 ~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~~~--~~~~gt~~y~aP   87 (87)
                      +.+..++.|++.++  .++|+.+++|+|++|.|++++.+   ..++++|||++.........  ....+++.|+||
T Consensus        93 ~~~~~~~~~i~~~l--~~lH~~~~~H~dl~p~nili~~~---~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~y~aP  163 (250)
T cd05085          93 KQLVKFALDAAAGM--AYLESKNCIHRDLAARNCLVGEN---NVLKISDFGMSRQEDDGIYSSSGLKQIPIKWTAP  163 (250)
T ss_pred             HHHHHHHHHHHHHH--HHHHhCCeeecccChheEEEcCC---CeEEECCCccceeccccccccCCCCCCcccccCH
Confidence            57788899999999  99999999999999999999874   78999999998754332211  122334567776

Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c

>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15

Probab=99.27  E-value=1.1e-11  Score=77.26  Aligned_cols=69  Identities=26%  Similarity=0.423  Sum_probs=57.2

Q ss_pred             HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCc------cccccccccccccC
Q psy8010          14 RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDV------DVREILGTPDYVGE   87 (87)
Q Consensus        14 ~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~------~~~~~~gt~~y~aP   87 (87)
                      .....++.|++.++  .++|+.+++|+|++|.|++++.+   ..++++|||++..+....      ....+.|++.|+||
T Consensus       107 ~~~~~i~~qi~~~L--~~LH~~~i~H~dl~p~nill~~~---~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~~~~y~aP  181 (337)
T cd07852         107 VHKRYIMYQLLKAL--KYIHSGNVIHRDLKPSNILLNSD---CRVKLADFGLARSLSELEENPENPVLTDYVATRWYRAP  181 (337)
T ss_pred             HHHHHHHHHHHHHH--HHHHHCCeecCCCCHHHEEEcCC---CcEEEeeccchhccccccccccCcchhcccccccccCc
Confidence            35677899999999  99999999999999999999885   789999999988653321      22346788899987

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul

>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase

Probab=99.27  E-value=1.3e-11  Score=73.63  Aligned_cols=73  Identities=33%  Similarity=0.482  Sum_probs=59.5

Q ss_pred             hhcH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCc-cccccccccccccC
Q psy8010          10 ARIP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDV-DVREILGTPDYVGE   87 (87)
Q Consensus        10 ~~~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~-~~~~~~gt~~y~aP   87 (87)
                      ..++ ..+..++.+++.++  .++|+.+++|+|++|.|++++..   ..++++|||.+....... ......|++.|+||
T Consensus        98 ~~~~~~~~~~i~~~i~~~l--~~lh~~~~~H~dl~~~nil~~~~---~~~~l~d~~~~~~~~~~~~~~~~~~~~~~y~~p  172 (258)
T cd08215          98 KPFPEEQILDWFVQLCLAL--KYLHSRKILHRDIKPQNIFLTSN---GLVKLGDFGISKVLSSTVDLAKTVVGTPYYLSP  172 (258)
T ss_pred             CCcCHHHHHHHHHHHHHHH--HHHHhCCEecccCChHHeEEcCC---CcEEECCccceeecccCcceecceeeeecccCh
Confidence            3344 57889999999999  99999999999999999999874   789999999987654433 22345788888887

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They

>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase

Probab=99.27  E-value=1.4e-11  Score=74.28  Aligned_cols=71  Identities=13%  Similarity=0.209  Sum_probs=55.0

Q ss_pred             cH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCccc--cccccccccccC
Q psy8010          12 IP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDVDV--REILGTPDYVGE   87 (87)
Q Consensus        12 ~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~~~--~~~~gt~~y~aP   87 (87)
                      ++ ..+..++.|++.++  .++|+.+++|+|++|.|+++..+   ..++++|||++.........  ....+++.|+||
T Consensus       101 l~~~~~~~~~~ql~~~l--~~lH~~~i~H~dlkp~nil~~~~---~~~kl~df~~~~~~~~~~~~~~~~~~~~~~y~aP  174 (263)
T cd05052         101 VNAVVLLYMATQISSAM--EYLEKKNFIHRDLAARNCLVGEN---HLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAP  174 (263)
T ss_pred             CCHHHHHHHHHHHHHHH--HHHHhCCEeecccCcceEEEcCC---CcEEeCCCccccccccceeeccCCCCCccccCCH
Confidence            44 46788899999999  99999999999999999999874   78999999998866433221  112334567776

Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays

>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3

Probab=99.27  E-value=1.2e-11  Score=74.80  Aligned_cols=69  Identities=12%  Similarity=0.199  Sum_probs=53.8

Q ss_pred             HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCcc---ccccccccccccC
Q psy8010          14 RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDVD---VREILGTPDYVGE   87 (87)
Q Consensus        14 ~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~~---~~~~~gt~~y~aP   87 (87)
                      +.+..++.|++.++  .|+|+.+++|+|++|.|++++.+   ..++++|||+++.......   .....+++.|++|
T Consensus       113 ~~~~~~~~~i~~~l--~~lH~~~i~H~dikp~nili~~~---~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~p  184 (273)
T cd05074         113 QTLVRFMIDIASGM--EYLSSKNFIHRDLAARNCMLNEN---MTVCVADFGLSKKIYSGDYYRQGCASKLPVKWLAL  184 (273)
T ss_pred             HHHHHHHHHHHHHH--HHHHhCCEeecccchhhEEEcCC---CCEEECcccccccccCCcceecCCCccCchhhcCH
Confidence            46788999999999  99999999999999999999874   7899999999886543221   1223344556655

Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac

>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2

Probab=99.27  E-value=1.4e-11  Score=74.36  Aligned_cols=56  Identities=16%  Similarity=0.314  Sum_probs=48.9

Q ss_pred             hhcH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecC
Q psy8010          10 ARIP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLS   70 (87)
Q Consensus        10 ~~~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~   70 (87)
                      ..++ +++..++.|++.++  .++|+.+++|+|++|.|++++.+   ..++++|||++....
T Consensus       102 ~~~~~~~~~~~~~~l~~al--~~lH~~~i~H~dlkp~Nili~~~---~~~kl~dfg~~~~~~  158 (268)
T cd05063         102 GEFSSYQLVGMLRGIAAGM--KYLSDMNYVHRDLAARNILVNSN---LECKVSDFGLSRVLE  158 (268)
T ss_pred             CCCCHHHHHHHHHHHHHHH--HHHHHCCeeccccchhhEEEcCC---CcEEECCCccceecc
Confidence            3455 57888999999999  99999999999999999999874   789999999987653

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored

>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases

Probab=99.27  E-value=1.3e-11  Score=75.63  Aligned_cols=69  Identities=13%  Similarity=0.210  Sum_probs=54.4

Q ss_pred             HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCccc---cccccccccccC
Q psy8010          14 RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDVDV---REILGTPDYVGE   87 (87)
Q Consensus        14 ~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~~~---~~~~gt~~y~aP   87 (87)
                      +.+..++.|++.++  .|+|+.+++|+|++|.|++++.+   ..++++|||++..+......   ....+++.|+||
T Consensus       129 ~~~~~i~~~i~~al--~~lH~~~i~H~dlkp~Nill~~~---~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aP  200 (295)
T cd05097         129 ANLLYMAVQIASGM--KYLASLNFVHRDLATRNCLVGNH---YTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMAW  200 (295)
T ss_pred             HHHHHHHHHHHHHH--HHHHhcCeeccccChhhEEEcCC---CcEEecccccccccccCcceeccCcCcCceeecCh
Confidence            46778899999999  99999999999999999999874   67999999998765332211   223445678876

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including

>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin

Probab=99.26  E-value=1.2e-11  Score=75.57  Aligned_cols=72  Identities=25%  Similarity=0.385  Sum_probs=57.7

Q ss_pred             hcH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCc-cccccccccccccC
Q psy8010          11 RIP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDV-DVREILGTPDYVGE   87 (87)
Q Consensus        11 ~~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~-~~~~~~gt~~y~aP   87 (87)
                      .++ +.+..++.|++.++  .++|..+++|+|++|+|++++..   ..++++|||++....... ......|++.|+||
T Consensus       124 ~~~~~~~~~~~~qi~~al--~~lH~~~ivH~dlkp~nili~~~---~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aP  197 (291)
T cd06639         124 RLDEAMISYILYGALLGL--QHLHNNRIIHRDVKGNNILLTTE---GGVKLVDFGVSAQLTSTRLRRNTSVGTPFWMAP  197 (291)
T ss_pred             CCCHHHHHHHHHHHHHHH--HHHHhCCeeccCCCHHHEEEcCC---CCEEEeecccchhcccccccccCccCCccccCh
Confidence            344 47888999999999  99999999999999999999875   679999999987653322 12334677888887

Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre

>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7

Probab=99.26  E-value=1.1e-11  Score=74.67  Aligned_cols=69  Identities=28%  Similarity=0.432  Sum_probs=56.7

Q ss_pred             HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCcc-ccccccccccccC
Q psy8010          14 RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDVD-VREILGTPDYVGE   87 (87)
Q Consensus        14 ~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~~-~~~~~gt~~y~aP   87 (87)
                      +.+..++.|++.++  .++|+.+++|+|++|.|++++.+   ..++++|||++........ .....|++.|+||
T Consensus       106 ~~~~~~~~~i~~~l--~~LH~~~i~H~dl~p~nili~~~---~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~ap  175 (267)
T cd08229         106 KTVWKYFVQLCSAL--EHMHSRRVMHRDIKPANVFITAT---GVVKLGDLGLGRFFSSKTTAAHSLVGTPYYMSP  175 (267)
T ss_pred             HHHHHHHHHHHHHH--HHHHHCCeecCCCCHHHEEEcCC---CCEEECcchhhhccccCCcccccccCCcCccCH
Confidence            46788899999999  99999999999999999999874   7899999998876543322 2345788888887

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.

>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase)

Probab=99.26  E-value=1.3e-11  Score=75.03  Aligned_cols=71  Identities=13%  Similarity=0.162  Sum_probs=55.8

Q ss_pred             cH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCccc---cccccccccccC
Q psy8010          12 IP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDVDV---REILGTPDYVGE   87 (87)
Q Consensus        12 ~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~~~---~~~~gt~~y~aP   87 (87)
                      ++ ..+..++.|++.++  .|+|+.+++|+|++|.|+++..+   ..++++|||+++.+..+...   ....++..|+||
T Consensus       114 l~~~~~~~i~~~i~~~l--~~LH~~~i~H~di~p~nil~~~~---~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~y~ap  188 (280)
T cd05043         114 LSTQQLVHMAIQIACGM--SYLHKRGVIHKDIAARNCVIDEE---LQVKITDNALSRDLFPMDYHCLGDNENRPVKWMAL  188 (280)
T ss_pred             CCHHHHHHHHHHHHHHH--HHHHHCCEeecccCHhhEEEcCC---CcEEECCCCCcccccCCceEEeCCCCCcchhccCH
Confidence            44 46888999999999  99999999999999999999875   78999999999866433221   123445567776

Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It

>KOG1164|consensus

Probab=99.26  E-value=1e-11  Score=77.57  Aligned_cols=76  Identities=21%  Similarity=0.299  Sum_probs=58.3

Q ss_pred             hhcH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCC--CCcEEEEeeccce--ecCCCc--------c-c
Q psy8010          10 ARIP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYP--DCDVKLCDFGISR--HLSRDV--------D-V   75 (87)
Q Consensus        10 ~~~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~--~~~~kl~dfg~~~--~~~~~~--------~-~   75 (87)
                      ++++ ..+..++.|++.++  .++|+.|++|||+||.|+.++...+  ...+.+.|||+++  .+....        . .
T Consensus       117 ~~fs~~T~l~ia~q~l~~l--~~lH~~G~iHRDiKp~N~~~g~~~~~~~~~~~llDfGlar~~~~~~~~~~~~~~~r~~~  194 (322)
T KOG1164|consen  117 GRFSRKTVLRIAIQNLNAL--EDLHSKGFIHRDIKPENFVVGQSSRSEVRTLYLLDFGLARRFKYVGDSGGNLRPPRPQK  194 (322)
T ss_pred             CCcCHhHHHHHHHHHHHHH--HHHHhcCcccCCcCHHHeeecCCCCcccceEEEEecCCCccccccCCCCcccccCCCCc
Confidence            4566 58999999999999  9999999999999999999997531  1469999999999  431111        1 1


Q ss_pred             cccccccccccC
Q psy8010          76 REILGTPDYVGE   87 (87)
Q Consensus        76 ~~~~gt~~y~aP   87 (87)
                      ....||..|.|+
T Consensus       195 ~~~rGT~ry~S~  206 (322)
T KOG1164|consen  195 GLFRGTLRYASI  206 (322)
T ss_pred             cCCCCccccccH
Confidence            234588888764

>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2

Probab=99.26  E-value=1.2e-11  Score=76.11  Aligned_cols=69  Identities=23%  Similarity=0.399  Sum_probs=57.4

Q ss_pred             HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCcc-ccccccccccccC
Q psy8010          14 RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDVD-VREILGTPDYVGE   87 (87)
Q Consensus        14 ~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~~-~~~~~gt~~y~aP   87 (87)
                      +++..++.|++.++  .++|+.+++|+|++|.|++++.+   ..++++|||++........ .....|++.|+||
T Consensus       115 ~~~~~i~~~l~~al--~~LH~~~i~H~dL~p~Nili~~~---~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aP  184 (296)
T cd06655         115 AQIAAVCRECLQAL--EFLHANQVIHRDIKSDNVLLGMD---GSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAP  184 (296)
T ss_pred             HHHHHHHHHHHHHH--HHHHHCCcccCCCCHHHEEECCC---CCEEEccCccchhcccccccCCCcCCCccccCc
Confidence            57888999999999  99999999999999999999874   7899999998876543322 2345788889887

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3

Probab=99.26  E-value=1.9e-11  Score=75.71  Aligned_cols=69  Identities=26%  Similarity=0.408  Sum_probs=56.4

Q ss_pred             hcH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCccccccccccccccC
Q psy8010          11 RIP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDVDVREILGTPDYVGE   87 (87)
Q Consensus        11 ~~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~~~~~~~gt~~y~aP   87 (87)
                      .++ ..+..++.|++.++  .|+|+.+++|+|++|.|+++..+   ..++++|||++....   ......|+..|+||
T Consensus       117 ~l~~~~~~~~~~qi~~al--~~LH~~gi~H~dl~p~nili~~~---~~~kL~dfg~~~~~~---~~~~~~~~~~y~aP  186 (313)
T cd06633         117 PLQEVEIAAITHGALQGL--AYLHSHNMIHRDIKAGNILLTEP---GQVKLADFGSASKSS---PANSFVGTPYWMAP  186 (313)
T ss_pred             CCCHHHHHHHHHHHHHHH--HHHHHCCeecCCCChhhEEECCC---CCEEEeecCCCcccC---CCCCccccccccCh
Confidence            345 46788899999999  99999999999999999999874   789999999876432   22345778888887

Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co

>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1

Probab=99.26  E-value=1e-11  Score=76.54  Aligned_cols=69  Identities=10%  Similarity=0.176  Sum_probs=54.3

Q ss_pred             HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCccc---cccccccccccC
Q psy8010          14 RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDVDV---REILGTPDYVGE   87 (87)
Q Consensus        14 ~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~~~---~~~~gt~~y~aP   87 (87)
                      +.+..++.|++.++  .|+|+.+++|+|++|.|++++.+   ..++++|||++.........   ....+++.|+||
T Consensus       140 ~~~~~~~~qi~~aL--~~lH~~gi~H~dlkp~Nill~~~---~~~kL~dfg~a~~~~~~~~~~~~~~~~~~~~y~aP  211 (307)
T cd05098         140 KDLVSCAYQVARGM--EYLASKKCIHRDLAARNVLVTED---NVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAP  211 (307)
T ss_pred             HHHHHHHHHHHHHH--HHHHHCCcccccccHHheEEcCC---CcEEECCCcccccccccchhhccccCCCccceeCh
Confidence            46788999999999  99999999999999999999875   78999999998765322111   112334678887

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase

Probab=99.26  E-value=9.1e-12  Score=75.70  Aligned_cols=72  Identities=18%  Similarity=0.367  Sum_probs=58.3

Q ss_pred             hcH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCccccccccccccccC
Q psy8010          11 RIP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDVDVREILGTPDYVGE   87 (87)
Q Consensus        11 ~~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~~~~~~~gt~~y~aP   87 (87)
                      .++ +.+..++.|++.++  .++|..+++|+|++|.|+++..+   ..++++|||.+.............|+..|+||
T Consensus        91 ~~~~~~~~~~~~ql~~~l--~~lH~~~i~H~di~p~Nil~~~~---~~~~l~dfg~~~~~~~~~~~~~~~~~~~y~~P  163 (277)
T cd05577          91 GFPEARAIFYAAQIICGL--EHLHQRRIVYRDLKPENVLLDDH---GNVRISDLGLAVELKGGKKIKGRAGTPGYMAP  163 (277)
T ss_pred             CCCHHHHHHHHHHHHHHH--HHHHhCCcccCCCCHHHEEECCC---CCEEEccCcchhhhccCCccccccCCCCcCCH
Confidence            355 47888899999999  99999999999999999999875   78999999988765443333445667778776

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of

>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1

Probab=99.26  E-value=1.6e-11  Score=73.94  Aligned_cols=73  Identities=18%  Similarity=0.343  Sum_probs=57.1

Q ss_pred             hcH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCcc-----cccccccccc
Q psy8010          11 RIP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDVD-----VREILGTPDY   84 (87)
Q Consensus        11 ~~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~~-----~~~~~gt~~y   84 (87)
                      .++ ..+..++.|++.|+  .++|+++++|+|++|.|++++..  ...++++|||.+..+.....     .....|+..|
T Consensus        99 ~~~~~~~~~~~~ql~~al--~~LH~~~i~H~~i~~~nil~~~~--~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~  174 (268)
T cd06630          99 AFKEAVIINYTEQLLRGL--SYLHENQIIHRDVKGANLLIDST--GQRLRIADFGAAARLAAKGTGAGEFQGQLLGTIAF  174 (268)
T ss_pred             CCCHHHHHHHHHHHHHHH--HHHHhCCeecCCCCHHHEEEcCC--CCEEEEcccccccccccccccCCccccccccccce
Confidence            344 46788899999999  99999999999999999999764  24699999999876543211     1234677888


Q ss_pred             ccC
Q psy8010          85 VGE   87 (87)
Q Consensus        85 ~aP   87 (87)
                      +||
T Consensus       175 ~~P  177 (268)
T cd06630         175 MAP  177 (268)
T ss_pred             eCH
Confidence            887

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their

>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases

Probab=99.26  E-value=2.3e-11  Score=73.12  Aligned_cols=54  Identities=20%  Similarity=0.388  Sum_probs=48.3

Q ss_pred             cH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecC
Q psy8010          12 IP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLS   70 (87)
Q Consensus        12 ~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~   70 (87)
                      ++ +.+..++.|++.++  .++|..+++|+|++|.|++++.+   ..++++|||+++.+.
T Consensus        92 ~~~~~~~~~~~qi~~~l--~~lh~~~i~H~di~p~nili~~~---~~~kl~df~~~~~~~  146 (257)
T cd05060          92 IPVSDLKELAHQVAMGM--AYLESKHFVHRDLAARNVLLVNR---HQAKISDFGMSRALG  146 (257)
T ss_pred             CCHHHHHHHHHHHHHHH--HHHhhcCeeccCcccceEEEcCC---CcEEeccccccceee
Confidence            44 57899999999999  99999999999999999999875   789999999988663

Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi

>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein

Probab=99.25  E-value=2.8e-11  Score=74.62  Aligned_cols=71  Identities=13%  Similarity=0.262  Sum_probs=55.5

Q ss_pred             cH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCc--------ccccccccc
Q psy8010          12 IP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDV--------DVREILGTP   82 (87)
Q Consensus        12 ~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~--------~~~~~~gt~   82 (87)
                      ++ ..+..++.|++.|+  .|+|+++++|+|++|.|++++.+   ..++++||+.+..+....        ......++.
T Consensus        98 ~~~~~~~~~~~~l~~~L--~~LH~~~ivH~dlk~~Nili~~~---~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~  172 (314)
T cd08216          98 LPELAIAFILKDVLNAL--DYIHSKGFIHRSVKASHILLSGD---GKVVLSGLRYSVSMIKHGKRQRVVHDFPKSSVKNL  172 (314)
T ss_pred             CCHHHHHHHHHHHHHHH--HHHHHCCeecCCCCcceEEEecC---CceEEecCccceeeccccccccccccccccccccc
Confidence            44 46788999999999  99999999999999999999974   789999999877542211        112345667


Q ss_pred             ccccC
Q psy8010          83 DYVGE   87 (87)
Q Consensus        83 ~y~aP   87 (87)
                      .|+||
T Consensus       173 ~y~aP  177 (314)
T cd08216         173 PWLSP  177 (314)
T ss_pred             cccCH
Confidence            78876

Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc

>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase

Probab=99.25  E-value=1.2e-11  Score=77.61  Aligned_cols=70  Identities=19%  Similarity=0.416  Sum_probs=57.2

Q ss_pred             hcH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCccccccccccccccC
Q psy8010          11 RIP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDVDVREILGTPDYVGE   87 (87)
Q Consensus        11 ~~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~~~~~~~gt~~y~aP   87 (87)
                      .++ +.+..++.|++.++  .++|+.+++|+|++|.|++++.+   ..++++|||++.....  ......+++.|+||
T Consensus       114 ~l~~~~~~~i~~qi~~al--~~LH~~gi~H~dlkp~Nill~~~---~~~kl~dfg~~~~~~~--~~~~~~~~~~y~aP  184 (343)
T cd07880         114 KLSEDRIQFLVYQMLKGL--KYIHAAGIIHRDLKPGNLAVNED---CELKILDFGLARQTDS--EMTGYVVTRWYRAP  184 (343)
T ss_pred             CCCHHHHHHHHHHHHHHH--HHHHhCCeecCCCCHHHEEEcCC---CCEEEeeccccccccc--CccccccCCcccCH
Confidence            455 57888999999999  99999999999999999999874   7899999999876432  22334667788876

Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12

>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1

Probab=99.25  E-value=2.6e-11  Score=75.19  Aligned_cols=69  Identities=26%  Similarity=0.398  Sum_probs=56.1

Q ss_pred             hcH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCccccccccccccccC
Q psy8010          11 RIP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDVDVREILGTPDYVGE   87 (87)
Q Consensus        11 ~~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~~~~~~~gt~~y~aP   87 (87)
                      .++ ..+..++.|++.++  .++|..+++|+|++|.|+++..+   ..++++|||++.....   .....|++.|+||
T Consensus       121 ~l~~~~~~~i~~~i~~~l--~~lH~~~i~H~dL~p~Nil~~~~---~~~kl~dfg~~~~~~~---~~~~~~~~~y~aP  190 (317)
T cd06635         121 PLQEVEIAAITHGALQGL--AYLHSHNMIHRDIKAGNILLTEP---GQVKLADFGSASIASP---ANSFVGTPYWMAP  190 (317)
T ss_pred             CCCHHHHHHHHHHHHHHH--HHHHHCCcccCCCCcccEEECCC---CCEEEecCCCccccCC---cccccCCccccCh
Confidence            344 46788899999999  99999999999999999999874   7899999998765432   2234677788877

Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron

>KOG1151|consensus

Probab=99.25  E-value=3.4e-11  Score=78.25  Aligned_cols=72  Identities=18%  Similarity=0.321  Sum_probs=60.4

Q ss_pred             HHHHHHHHHHHHHHHHHHhhhC--CceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCcc--------ccccccccc
Q psy8010          14 RLVAKVTVTLLGSLNHHFTSTH--SLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDVD--------VREILGTPD   83 (87)
Q Consensus        14 ~~~~~~~~q~~~~l~~~~~h~~--~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~~--------~~~~~gt~~   83 (87)
                      ++++.++-|++.+|  .|+...  .|+|-|+||.||++....-.+.+|+.|||+++++.++..        .....||.|
T Consensus       568 KEARSIiMQiVnAL--~YLNEikpPIIHYDLKPgNILLv~GtacGeIKITDFGLSKIMdddSy~~vdGmeLTSQgAGTYW  645 (775)
T KOG1151|consen  568 KEARSIIMQIVNAL--KYLNEIKPPIIHYDLKPGNILLVNGTACGEIKITDFGLSKIMDDDSYNSVDGMELTSQGAGTYW  645 (775)
T ss_pred             HHHHHHHHHHHHHH--HHHhccCCCeeeeccCCccEEEecCcccceeEeeecchhhhccCCccCcccceeeecccCceee
Confidence            58999999999999  999975  599999999999988764457799999999998854332        146789999


Q ss_pred             cccC
Q psy8010          84 YVGE   87 (87)
Q Consensus        84 y~aP   87 (87)
                      |++|
T Consensus       646 YLPP  649 (775)
T KOG1151|consen  646 YLPP  649 (775)
T ss_pred             ecCc
Confidence            9987

>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein

Probab=99.25  E-value=1.3e-11  Score=75.44  Aligned_cols=69  Identities=12%  Similarity=0.170  Sum_probs=54.2

Q ss_pred             HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCcc---ccccccccccccC
Q psy8010          14 RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDVD---VREILGTPDYVGE   87 (87)
Q Consensus        14 ~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~~---~~~~~gt~~y~aP   87 (87)
                      +.+..++.|++.++  .++|+.+++|+|++|.|+++..+   ..++++|||+++.......   .....++..|+||
T Consensus       127 ~~~~~i~~~i~~~l--~~LH~~~ivH~dikp~nill~~~---~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~ap  198 (290)
T cd05045         127 GDLISFAWQISRGM--QYLAEMKLVHRDLAARNVLVAEG---RKMKISDFGLSRDVYEEDSYVKRSKGRIPVKWMAI  198 (290)
T ss_pred             HHHHHHHHHHHHHH--HHHHHCCeehhhhhhheEEEcCC---CcEEeccccccccccCccchhcccCCCCCccccCH
Confidence            46788999999999  99999999999999999999874   7899999999876532221   1122445567776

Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi

>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2

Probab=99.25  E-value=2e-11  Score=74.93  Aligned_cols=69  Identities=13%  Similarity=0.199  Sum_probs=53.6

Q ss_pred             HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCccc---cccccccccccC
Q psy8010          14 RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDVDV---REILGTPDYVGE   87 (87)
Q Consensus        14 ~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~~~---~~~~gt~~y~aP   87 (87)
                      +.+..++.|++.++  .++|+.+++|+|++|.|++++.+   ..++++|||++..+......   ....+++.|++|
T Consensus       130 ~~~~~~~~~i~~al--~~lH~~~i~H~dlkp~Nili~~~---~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~p  201 (296)
T cd05095         130 STLIFMATQIASGM--KYLSSLNFVHRDLATRNCLVGKN---YTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMSW  201 (296)
T ss_pred             HHHHHHHHHHHHHH--HHHHHCCeecccCChheEEEcCC---CCEEeccCcccccccCCcceeccCcCcCccccCCH
Confidence            36888999999999  99999999999999999999874   78999999998765332211   122334567665

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit

>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases

Probab=99.25  E-value=2.5e-11  Score=73.42  Aligned_cols=72  Identities=21%  Similarity=0.315  Sum_probs=57.1

Q ss_pred             hcH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCc---ccccccccccccc
Q psy8010          11 RIP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDV---DVREILGTPDYVG   86 (87)
Q Consensus        11 ~~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~---~~~~~~gt~~y~a   86 (87)
                      .++ +.+..++.|++.++  .++|+.+++|+|++|+|+++..+   ..++++|||++.......   ......|+..|+|
T Consensus       104 ~l~~~~~~~~~~qi~~~l--~~lH~~~i~H~dl~~~nil~~~~---~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~y~~  178 (272)
T cd06629         104 RFEEQLVRFFTEQVLEGL--AYLHSKGILHRDLKADNLLVDAD---GICKISDFGISKKSDDIYDNDQNMSMQGSVFWMA  178 (272)
T ss_pred             CCCHHHHHHHHHHHHHHH--HHHhhCCeeecCCChhhEEEcCC---CeEEEeeccccccccccccccccccccCCccccC
Confidence            455 46788899999999  99999999999999999999874   789999999987643211   1233467778887


Q ss_pred             C
Q psy8010          87 E   87 (87)
Q Consensus        87 P   87 (87)
                      |
T Consensus       179 P  179 (272)
T cd06629         179 P  179 (272)
T ss_pred             H
Confidence            6

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte

>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases

Probab=99.25  E-value=1.9e-11  Score=74.44  Aligned_cols=71  Identities=28%  Similarity=0.601  Sum_probs=57.1

Q ss_pred             hcH-HHHHHHHHHHHHHHHHHHhhh-CCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCccccccccccccccC
Q psy8010          11 RIP-RLVAKVTVTLLGSLNHHFTST-HSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDVDVREILGTPDYVGE   87 (87)
Q Consensus        11 ~~~-~~~~~~~~q~~~~l~~~~~h~-~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~~~~~~~gt~~y~aP   87 (87)
                      .++ ..+..++.|++.++  .|+|. .+++|+|++|+|++++.+   ..++++|||++..+... ......|++.|+||
T Consensus        98 ~~~~~~~~~~~~~i~~~l--~~LH~~~~i~H~dl~p~nil~~~~---~~~~l~dfg~~~~~~~~-~~~~~~~~~~y~aP  170 (286)
T cd06622          98 GIPEDVLRRITYAVVKGL--KFLKEEHNIIHRDVKPTNVLVNGN---GQVKLCDFGVSGNLVAS-LAKTNIGCQSYMAP  170 (286)
T ss_pred             CCCHHHHHHHHHHHHHHH--HHHHhcCCEeeCCCCHHHEEECCC---CCEEEeecCCcccccCC-ccccCCCccCccCc
Confidence            455 47889999999999  99996 599999999999999884   78999999998765322 22344677788887

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk

Probab=99.25  E-value=1.6e-11  Score=73.82  Aligned_cols=69  Identities=12%  Similarity=0.224  Sum_probs=54.1

Q ss_pred             HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCccc-cccccccccccC
Q psy8010          14 RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDVDV-REILGTPDYVGE   87 (87)
Q Consensus        14 ~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~~~-~~~~gt~~y~aP   87 (87)
                      +.+..++.|++.++  .++|+.+++|+|++|.|++++.+   ..++++|||.+.....+... ....+++.|++|
T Consensus       104 ~~~~~~~~~i~~al--~~lH~~~i~h~dl~~~nilv~~~---~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~~P  173 (261)
T cd05148         104 ASLIDMACQVAEGM--AYLEEQNSIHRDLAARNILVGED---LVCKVADFGLARLIKEDVYLSSDKKIPYKWTAP  173 (261)
T ss_pred             HHHHHHHHHHHHHH--HHHHHCCeeccccCcceEEEcCC---ceEEEccccchhhcCCccccccCCCCceEecCH
Confidence            57888999999999  99999999999999999999885   78999999998765432211 122344557665

Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom

>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase

Probab=99.25  E-value=2.2e-11  Score=74.06  Aligned_cols=54  Identities=17%  Similarity=0.258  Sum_probs=47.2

Q ss_pred             HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceec
Q psy8010          14 RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHL   69 (87)
Q Consensus        14 ~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~   69 (87)
                      ..+..++.|++.++  .|+|+.+++|+|++|+|++++..++...++++|||++..+
T Consensus       116 ~~~~~~~~qi~~~l--~~LH~~~ivH~dlkp~nil~~~~~~~~~~kl~dfg~~~~~  169 (277)
T cd05036         116 KDLLFCARDVAKGC--KYLEENHFIHRDIAARNCLLTCKGPGRVAKIADFGMARDI  169 (277)
T ss_pred             HHHHHHHHHHHHHH--HHHHHCCEeecccchheEEEeccCCCcceEeccCcccccc
Confidence            46778999999999  9999999999999999999987543456899999998865

Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well

>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk

Probab=99.25  E-value=2.5e-11  Score=73.05  Aligned_cols=71  Identities=8%  Similarity=0.176  Sum_probs=56.1

Q ss_pred             cH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCccc--cccccccccccC
Q psy8010          12 IP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDVDV--REILGTPDYVGE   87 (87)
Q Consensus        12 ~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~~~--~~~~gt~~y~aP   87 (87)
                      ++ +.+..++.|++.++  .++|+.+++|+|++|.|++++.+   ..++++|||++..+......  ....++..|+||
T Consensus        99 ~~~~~~~~~~~~l~~al--~~lH~~~i~H~di~p~Nili~~~---~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~aP  172 (260)
T cd05070          99 LKLPNLVDMAAQVAAGM--AYIERMNYIHRDLRSANILVGDG---LVCKIADFGLARLIEDNEYTARQGAKFPIKWTAP  172 (260)
T ss_pred             CCHHHHHHHHHHHHHHH--HHHHHCCcccCCCccceEEEeCC---ceEEeCCceeeeeccCcccccccCCCCCccccCh
Confidence            44 47889999999999  99999999999999999999874   78999999998865432211  223445568877

Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r

>KOG0670|consensus

Probab=99.24  E-value=1.2e-11  Score=81.17  Aligned_cols=68  Identities=21%  Similarity=0.329  Sum_probs=58.9

Q ss_pred             HHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCccccccccccccccC
Q psy8010          15 LVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDVDVREILGTPDYVGE   87 (87)
Q Consensus        15 ~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~~~~~~~gt~~y~aP   87 (87)
                      .++.|+.|+..||  ..+-..|++|.|+||.|||++..  ...+|+||||-|.... ....+.|..+.+|.||
T Consensus       537 aVRsYaqQLflAL--klLK~c~vlHaDIKPDNiLVNE~--k~iLKLCDfGSA~~~~-eneitPYLVSRFYRaP  604 (752)
T KOG0670|consen  537 AVRSYAQQLFLAL--KLLKKCGVLHADIKPDNILVNES--KNILKLCDFGSASFAS-ENEITPYLVSRFYRAP  604 (752)
T ss_pred             HHHHHHHHHHHHH--HHHHhcCeeecccCccceEeccC--cceeeeccCccccccc-cccccHHHHHHhccCc
Confidence            4899999999999  99999999999999999999986  5679999999886543 3356677888899888

>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase

Probab=99.24  E-value=1.8e-11  Score=73.56  Aligned_cols=71  Identities=24%  Similarity=0.440  Sum_probs=58.0

Q ss_pred             cH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCccc-----cccccccccc
Q psy8010          12 IP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDVDV-----REILGTPDYV   85 (87)
Q Consensus        12 ~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~~~-----~~~~gt~~y~   85 (87)
                      ++ ..+..++.|++.++  .++|+.+++|+|++|.|++++.+   ..++++|||++..+......     ....|++.|+
T Consensus        99 ~~~~~~~~~~~ql~~al--~~lh~~~i~h~~l~p~ni~~~~~---~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~y~  173 (267)
T cd06610          99 LDEAIIATVLKEVLKGL--EYLHSNGQIHRDIKAGNILLGED---GSVKIADFGVSASLADGGDRTRKVRKTFVGTPCWM  173 (267)
T ss_pred             CCHHHHHHHHHHHHHHH--HHHHhCCeecCCCCHHhEEEcCC---CCEEEcccchHHHhccCccccccccccccCChhhc
Confidence            44 47888999999999  99999999999999999999985   67999999998765432211     3447888898


Q ss_pred             cC
Q psy8010          86 GE   87 (87)
Q Consensus        86 aP   87 (87)
                      ||
T Consensus       174 ~P  175 (267)
T cd06610         174 AP  175 (267)
T ss_pred             Ch
Confidence            87

Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1

>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase

Probab=99.24  E-value=5.9e-12  Score=75.75  Aligned_cols=72  Identities=31%  Similarity=0.672  Sum_probs=57.1

Q ss_pred             hhcH-HHHHHHHHHHHHHHHHHHhhh-CCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCccccccccccccccC
Q psy8010          10 ARIP-RLVAKVTVTLLGSLNHHFTST-HSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDVDVREILGTPDYVGE   87 (87)
Q Consensus        10 ~~~~-~~~~~~~~q~~~~l~~~~~h~-~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~~~~~~~gt~~y~aP   87 (87)
                      ..++ ..+..++.|++.++  .++|+ .+++|+|++|.|++++.+   ..++++|||.+......... ...|+..|+||
T Consensus        95 ~~~~~~~~~~~~~~l~~~l--~~lH~~~~i~H~dl~~~ni~~~~~---~~~~l~d~g~~~~~~~~~~~-~~~~~~~y~~P  168 (265)
T cd06605          95 GRIPERILGKIAVAVLKGL--TYLHEKHKIIHRDVKPSNILVNSR---GQIKLCDFGVSGQLVNSLAK-TFVGTSSYMAP  168 (265)
T ss_pred             CCCCHHHHHHHHHHHHHHH--HHHcCCCCeecCCCCHHHEEECCC---CCEEEeecccchhhHHHHhh-cccCChhccCH
Confidence            3445 46788999999999  99999 999999999999999985   78999999987654322211 25677778876

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity

>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases

Probab=99.24  E-value=2.7e-11  Score=73.43  Aligned_cols=69  Identities=13%  Similarity=0.189  Sum_probs=55.3

Q ss_pred             HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCcc---ccccccccccccC
Q psy8010          14 RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDVD---VREILGTPDYVGE   87 (87)
Q Consensus        14 ~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~~---~~~~~gt~~y~aP   87 (87)
                      ..+..++.|++.++  .++|+++++|+|++|.|++++.+   ..++++|||++........   .....+++.|+||
T Consensus       122 ~~~~~~~~~i~~~l--~~lH~~~i~h~dlkp~nili~~~---~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~y~aP  193 (280)
T cd05049         122 SQLLQIAVQIASGM--VYLASQHFVHRDLATRNCLVGYD---LVVKIGDFGMSRDVYTTDYYRVGGHTMLPIRWMPP  193 (280)
T ss_pred             HHHHHHHHHHHHHH--HHHhhCCeeccccccceEEEcCC---CeEEECCcccceecccCcceecCCCCcccceecCh
Confidence            46788899999999  99999999999999999999885   7899999999876532221   1233456778887

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt

>KOG1006|consensus

Probab=99.24  E-value=2.7e-12  Score=78.48  Aligned_cols=72  Identities=29%  Similarity=0.520  Sum_probs=54.5

Q ss_pred             hcHHH-HHHHHHHHHHHHHHHHhhh-CCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCccccccccccccccC
Q psy8010          11 RIPRL-VAKVTVTLLGSLNHHFTST-HSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDVDVREILGTPDYVGE   87 (87)
Q Consensus        11 ~~~~~-~~~~~~q~~~~l~~~~~h~-~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~~~~~~~gt~~y~aP   87 (87)
                      +++|+ +-.+....+.||  .|+-. ..++|||+||+||+++..   +.+|++|||++..+.++...+.-.|...||||
T Consensus       163 ~ipE~Ilg~ItvatV~AL--~yLK~~lkiIHRDvKPSNILldr~---G~vKLCDFGIcGqLv~SiAkT~daGCrpYmAP  236 (361)
T KOG1006|consen  163 RIPENILGHITVATVDAL--DYLKEELKIIHRDVKPSNILLDRH---GDVKLCDFGICGQLVDSIAKTVDAGCRPYMAP  236 (361)
T ss_pred             cCcHhhhhheeeeehhHH--HHHHHHhhhhhccCChhheEEecC---CCEeeecccchHhHHHHHHhhhccCCccccCh
Confidence            34443 333344456788  99874 689999999999999996   89999999998766554444556888999998

>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A

Probab=99.24  E-value=2.1e-11  Score=74.25  Aligned_cols=69  Identities=12%  Similarity=0.152  Sum_probs=54.5

Q ss_pred             HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCccc---cccccccccccC
Q psy8010          14 RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDVDV---REILGTPDYVGE   87 (87)
Q Consensus        14 ~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~~~---~~~~gt~~y~aP   87 (87)
                      +.+..++.|++.++  .|+|+.+++|+|++|+|++++..   ..++++|||++.........   ....+++.|+||
T Consensus       122 ~~~~~~~~qi~~al--~~LH~~~i~H~dlkp~nil~~~~---~~~kL~dfg~~~~~~~~~~~~~~~~~~~~~~y~aP  193 (280)
T cd05092         122 GQMLAIASQIASGM--VYLASLHFVHRDLATRNCLVGQG---LVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPP  193 (280)
T ss_pred             HHHHHHHHHHHHHH--HHHHHCCeecccccHhhEEEcCC---CCEEECCCCceeEcCCCceeecCCCccccccccCH
Confidence            46788899999999  99999999999999999999874   78999999998765332211   122345678776

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory

>PHA02988 hypothetical protein; Provisional

Probab=99.24  E-value=1.6e-11  Score=75.29  Aligned_cols=67  Identities=10%  Similarity=0.035  Sum_probs=55.5

Q ss_pred             HHHHHHHHHHHHHHHHHHhhh-CCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCccccccccccccccC
Q psy8010          14 RLVAKVTVTLLGSLNHHFTST-HSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDVDVREILGTPDYVGE   87 (87)
Q Consensus        14 ~~~~~~~~q~~~~l~~~~~h~-~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~~~~~~~gt~~y~aP   87 (87)
                      .....++.+++.++  .++|. .+++|+|++|.|++++.+   ..+|++|||+++.+....  ....|++.|+||
T Consensus       122 ~~~~~i~~~i~~~l--~~lH~~~~~~Hrdlkp~nill~~~---~~~kl~dfg~~~~~~~~~--~~~~~~~~y~aP  189 (283)
T PHA02988        122 KTKLDMAIDCCKGL--YNLYKYTNKPYKNLTSVSFLVTEN---YKLKIICHGLEKILSSPP--FKNVNFMVYFSY  189 (283)
T ss_pred             hHHHHHHHHHHHHH--HHHHhcCCCCCCcCChhhEEECCC---CcEEEcccchHhhhcccc--ccccCcccccCH
Confidence            46788899999999  99998 489999999999999985   789999999988654322  234678889887

>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase

Probab=99.24  E-value=2.4e-11  Score=72.85  Aligned_cols=73  Identities=11%  Similarity=0.183  Sum_probs=55.5

Q ss_pred             hhcH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCccc--ccccccccccc
Q psy8010          10 ARIP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDVDV--REILGTPDYVG   86 (87)
Q Consensus        10 ~~~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~~~--~~~~gt~~y~a   86 (87)
                      ..++ +.+..++.|++.++  .++|+.+++|+|++|.|++++..   ..++++|||++.........  ....++..|+|
T Consensus        95 ~~~~~~~~~~~~~~l~~~l--~~lH~~~i~h~dl~p~ni~i~~~---~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~~~a  169 (256)
T cd05112          95 GKFSQETLLGMCLDVCEGM--AYLESSNVIHRDLAARNCLVGEN---QVVKVSDFGMTRFVLDDQYTSSTGTKFPVKWSS  169 (256)
T ss_pred             cCCCHHHHHHHHHHHHHHH--HHHHHCCccccccccceEEEcCC---CeEEECCCcceeecccCcccccCCCccchhhcC
Confidence            3455 57888999999999  99999999999999999999874   78999999998765332211  12233456777


Q ss_pred             C
Q psy8010          87 E   87 (87)
Q Consensus        87 P   87 (87)
                      |
T Consensus       170 P  170 (256)
T cd05112         170 P  170 (256)
T ss_pred             H
Confidence            6

Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ

>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7

Probab=99.24  E-value=2.6e-11  Score=72.97  Aligned_cols=69  Identities=28%  Similarity=0.443  Sum_probs=56.8

Q ss_pred             HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCc-cccccccccccccC
Q psy8010          14 RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDV-DVREILGTPDYVGE   87 (87)
Q Consensus        14 ~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~-~~~~~~gt~~y~aP   87 (87)
                      +.+..++.|++.++  .++|+.+++|+|++|+|++++.+   ..++++|||++..+.... ......|++.|+||
T Consensus       106 ~~~~~~~~~l~~~l--~~lh~~~i~h~dl~p~nil~~~~---~~~~l~d~~~~~~~~~~~~~~~~~~~~~~y~ap  175 (267)
T cd08224         106 RTIWKYFVQLCSAL--EHMHSKRIMHRDIKPANVFITAT---GVVKLGDLGLGRFFSSKTTAAHSLVGTPYYMSP  175 (267)
T ss_pred             HHHHHHHHHHHHHH--HHHHhCCEecCCcChhhEEECCC---CcEEEeccceeeeccCCCcccceecCCccccCH
Confidence            57889999999999  99999999999999999999874   779999999987653322 22345678888877

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a

>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase

Probab=99.24  E-value=1.4e-11  Score=77.25  Aligned_cols=70  Identities=19%  Similarity=0.463  Sum_probs=58.0

Q ss_pred             hcH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCccccccccccccccC
Q psy8010          11 RIP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDVDVREILGTPDYVGE   87 (87)
Q Consensus        11 ~~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~~~~~~~gt~~y~aP   87 (87)
                      +++ +.+..++.|++.++  .++|+.|++|+|++|.|++++..   ..++++|||++......  .....+++.|+||
T Consensus       114 ~l~~~~~~~~~~ql~~aL--~~LH~~gi~H~dlkp~Nill~~~---~~~kL~dfg~~~~~~~~--~~~~~~~~~y~aP  184 (343)
T cd07851         114 KLSDDHIQFLVYQILRGL--KYIHSAGIIHRDLKPSNIAVNED---CELKILDFGLARHTDDE--MTGYVATRWYRAP  184 (343)
T ss_pred             CCCHHHHHHHHHHHHHHH--HHHHHCCeecCCCCHHHeEECCC---CCEEEcccccccccccc--ccCCcccccccCH
Confidence            345 57888999999999  99999999999999999999885   78999999998765332  3445678888887

Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK

>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3

Probab=99.24  E-value=2.7e-11  Score=73.65  Aligned_cols=69  Identities=26%  Similarity=0.433  Sum_probs=57.6

Q ss_pred             HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCc-cccccccccccccC
Q psy8010          14 RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDV-DVREILGTPDYVGE   87 (87)
Q Consensus        14 ~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~-~~~~~~gt~~y~aP   87 (87)
                      +.+..++.|++.++  .|+|+.+++|+|++|.|++++.+   ..++++|||++..+.... ......|+..|+||
T Consensus       100 ~~~~~~~~~i~~~l--~~LH~~~i~h~~l~p~ni~~~~~---~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~aP  169 (286)
T cd07846         100 SRVRKYLFQILRGI--EFCHSHNIIHRDIKPENILVSQS---GVVKLCDFGFARTLAAPGEVYTDYVATRWYRAP  169 (286)
T ss_pred             HHHHHHHHHHHHHH--HHHHHCCccccCCCHHHEEECCC---CcEEEEeeeeeeeccCCccccCcccceeeccCc
Confidence            57888999999999  99999999999999999999874   789999999988654332 22345678888887

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI

>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta

Probab=99.23  E-value=3.3e-11  Score=77.42  Aligned_cols=69  Identities=16%  Similarity=0.311  Sum_probs=55.6

Q ss_pred             HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCcc---ccccccccccccC
Q psy8010          14 RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDVD---VREILGTPDYVGE   87 (87)
Q Consensus        14 ~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~~---~~~~~gt~~y~aP   87 (87)
                      ..+..++.|++.++  .|+|..+++|+|++|.|++++..   ..++++|||++........   .....+++.||||
T Consensus       239 ~~~~~~~~qi~~aL--~~LH~~~ivHrdlkp~NiLl~~~---~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aP  310 (401)
T cd05107         239 MDLVGFSYQVANGM--EFLASKNCVHRDLAARNVLICEG---KLVKICDFGLARDIMRDSNYISKGSTFLPLKWMAP  310 (401)
T ss_pred             HHHHHHHHHHHHHH--HHHhcCCcCcccCCcceEEEeCC---CEEEEEecCcceecccccccccCCCcCCCCceeCh
Confidence            45788899999999  99999999999999999999874   7899999999886532221   1234567788887

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D

>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases

Probab=99.23  E-value=2.5e-11  Score=73.80  Aligned_cols=71  Identities=25%  Similarity=0.383  Sum_probs=57.3

Q ss_pred             cH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCc-cccccccccccccC
Q psy8010          12 IP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDV-DVREILGTPDYVGE   87 (87)
Q Consensus        12 ~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~-~~~~~~gt~~y~aP   87 (87)
                      ++ ..+..++.|++.++  .++|+.+++|+|++|.|++++.+   ..++++|||++..+.... ......+++.|+||
T Consensus        96 ~~~~~~~~~~~~i~~~L--~~lH~~~~~H~dl~p~nil~~~~---~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~aP  168 (283)
T cd07835          96 LDPPLIKSYLYQLLQGI--AYCHSHRVLHRDLKPQNLLIDRE---GALKLADFGLARAFGVPVRTYTHEVVTLWYRAP  168 (283)
T ss_pred             CCHHHHHHHHHHHHHHH--HHHHHCCeeCCCCCHHHEEEcCC---CcEEEeecccccccCCCccccCccccccCCCCC
Confidence            44 57888999999999  99999999999999999999884   789999999987653222 22334667888887

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc

>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12

Probab=99.23  E-value=1.5e-11  Score=75.37  Aligned_cols=72  Identities=18%  Similarity=0.273  Sum_probs=56.8

Q ss_pred             hcH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCc--cccccccccccccC
Q psy8010          11 RIP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDV--DVREILGTPDYVGE   87 (87)
Q Consensus        11 ~~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~--~~~~~~gt~~y~aP   87 (87)
                      .++ +.+..++.|++.++  .|+|..+++|+|++|.|++++.+   ..++++|||++..+....  ......+++.|+||
T Consensus       112 ~~~~~~~~~i~~qi~~aL--~~LH~~~i~H~dl~p~nili~~~---~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~y~~P  186 (302)
T cd07864         112 HFSEDHIKSFMKQLLEGL--NYCHKKNFLHRDIKCSNILLNNK---GQIKLADFGLARLYNSEESRPYTNKVITLWYRPP  186 (302)
T ss_pred             CCCHHHHHHHHHHHHHHH--HHHHhCCeecCCCCHHHEEECCC---CcEEeCcccccccccCCcccccccceeccCccCh
Confidence            344 57899999999999  99999999999999999999874   789999999987654322  11223456667776

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely

>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins

Probab=99.23  E-value=3e-11  Score=72.40  Aligned_cols=72  Identities=21%  Similarity=0.428  Sum_probs=56.9

Q ss_pred             hcH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCc---------ccccccc
Q psy8010          11 RIP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDV---------DVREILG   80 (87)
Q Consensus        11 ~~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~---------~~~~~~g   80 (87)
                      .++ ..+..++.|++.++  .++|..+++|+|++|.|++++.+   ..++++|||++.......         ......+
T Consensus        89 ~~~~~~~~~i~~qi~~~L--~~lH~~~i~H~di~~~nil~~~~---~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~  163 (265)
T cd05579          89 SLDEDVARIYIAEIVLAL--EYLHSNGIIHRDLKPDNILIDSN---GHLKLTDFGLSKVGLVRRQINLNDDEKEDKRIVG  163 (265)
T ss_pred             CCCHHHHHHHHHHHHHHH--HHHHHcCeecCCCCHHHeEEcCC---CCEEEEecccchhcccCcccccccccccccCccc
Confidence            344 47888999999999  99999999999999999999985   789999999877543221         1223466


Q ss_pred             ccccccC
Q psy8010          81 TPDYVGE   87 (87)
Q Consensus        81 t~~y~aP   87 (87)
                      ++.|++|
T Consensus       164 ~~~~~~P  170 (265)
T cd05579         164 TPDYIAP  170 (265)
T ss_pred             CccccCH
Confidence            7778776

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re

>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3

Probab=99.23  E-value=2.4e-11  Score=73.86  Aligned_cols=69  Identities=29%  Similarity=0.413  Sum_probs=56.3

Q ss_pred             HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCc-cccccccccccccC
Q psy8010          14 RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDV-DVREILGTPDYVGE   87 (87)
Q Consensus        14 ~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~-~~~~~~gt~~y~aP   87 (87)
                      ..+..++.|++.++  .|+|+.+++|+|++|.|+++..+   ..++++|||++....... ......+++.|+||
T Consensus       100 ~~~~~~~~~i~~~l--~~lh~~~i~H~~l~p~nill~~~---~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~aP  169 (284)
T cd07860         100 PLIKSYLFQLLQGL--AFCHSHRVLHRDLKPQNLLINTE---GAIKLADFGLARAFGVPVRTYTHEVVTLWYRAP  169 (284)
T ss_pred             HHHHHHHHHHHHHH--HHHHHCCeecCCCCHHHEEECCC---CCEEEeeccchhhcccCccccccccccccccCC
Confidence            47888999999999  99999999999999999999885   789999999987653222 22334567788887

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex

>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins

Probab=99.23  E-value=2.8e-11  Score=72.64  Aligned_cols=72  Identities=29%  Similarity=0.566  Sum_probs=59.0

Q ss_pred             hcH-HHHHHHHHHHHHHHHHHHhhh-CCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCccc-cccccccccccC
Q psy8010          11 RIP-RLVAKVTVTLLGSLNHHFTST-HSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDVDV-REILGTPDYVGE   87 (87)
Q Consensus        11 ~~~-~~~~~~~~q~~~~l~~~~~h~-~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~~~-~~~~gt~~y~aP   87 (87)
                      .++ +....++.|++.++  .++|+ .+++|+|++|.|++++.+   ..++++|||.+......... ....++..|+||
T Consensus        95 ~l~~~~~~~~~~~l~~~l--~~lh~~~~~~H~~l~~~ni~~~~~---~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~~p  169 (264)
T cd06623          95 KIPEPVLAYIARQILKGL--DYLHTKRHIIHRDIKPSNLLINSK---GEVKIADFGISKVLENTLDQCNTFVGTVTYMSP  169 (264)
T ss_pred             CCCHHHHHHHHHHHHHHH--HHHhccCCCccCCCCHHHEEECCC---CCEEEccCccceecccCCCcccceeecccccCH
Confidence            344 57889999999999  99999 999999999999999885   78999999998876443332 245677888876

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of

>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases

Probab=99.23  E-value=3.1e-11  Score=72.18  Aligned_cols=54  Identities=15%  Similarity=0.321  Sum_probs=47.3

Q ss_pred             hcH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceec
Q psy8010          11 RIP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHL   69 (87)
Q Consensus        11 ~~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~   69 (87)
                      .++ +.+..++.+++.++  .++|+.+++|+|++|.|++++.+   ..++++|||++...
T Consensus        89 ~~~~~~~~~~~~~~~~~l--~~lH~~~i~h~di~p~nili~~~---~~~~l~d~g~~~~~  143 (251)
T cd05041          89 RLTVKKLLQMSLDAAAGM--EYLESKNCIHRDLAARNCLVGEN---NVLKISDFGMSREE  143 (251)
T ss_pred             CCCHHHHHHHHHHHHHHH--HHHHhCCEehhhcCcceEEEcCC---CcEEEeeccccccc
Confidence            344 46788899999999  99999999999999999999875   78999999998754

Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k

>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4

Probab=99.23  E-value=2.3e-11  Score=73.31  Aligned_cols=72  Identities=22%  Similarity=0.379  Sum_probs=56.8

Q ss_pred             hcH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCC-------cccccccccc
Q psy8010          11 RIP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRD-------VDVREILGTP   82 (87)
Q Consensus        11 ~~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~-------~~~~~~~gt~   82 (87)
                      .++ +.+..++.|++.++  .++|+.+++|+|++|.|+++...   ..++++|||++......       .......|++
T Consensus        98 ~~~~~~~~~~~~qi~~~l--~~lH~~~i~H~dl~p~nil~~~~---~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~  172 (265)
T cd06631          98 PLPEPVFCKYTKQILDGV--AYLHNNCVVHRDIKGNNVMLMPN---GIIKLIDFGCARRLAWVGLHGTHSNMLKSMHGTP  172 (265)
T ss_pred             CCCHHHHHHHHHHHHHHH--HHHHhCCcccCCcCHHhEEECCC---CeEEeccchhhHhhhhccccccccccccccCCCc
Confidence            344 57788999999999  99999999999999999999874   78999999988754211       1123456788


Q ss_pred             ccccC
Q psy8010          83 DYVGE   87 (87)
Q Consensus        83 ~y~aP   87 (87)
                      .|+||
T Consensus       173 ~~~~p  177 (265)
T cd06631         173 YWMAP  177 (265)
T ss_pred             cccCh
Confidence            88887

Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.

>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4

Probab=99.22  E-value=3.1e-11  Score=72.52  Aligned_cols=69  Identities=28%  Similarity=0.505  Sum_probs=56.4

Q ss_pred             HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCcc-----ccccccccccccC
Q psy8010          14 RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDVD-----VREILGTPDYVGE   87 (87)
Q Consensus        14 ~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~~-----~~~~~gt~~y~aP   87 (87)
                      +.+..++.|++.++  .++|+.+++|+|+++.|++++..   ..++++|||.+........     .....+++.|+||
T Consensus        99 ~~~~~i~~~i~~~l--~~lh~~~i~H~dl~~~nil~~~~---~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~P  172 (264)
T cd06626          99 HVIRVYTLQLLEGL--AYLHSHGIVHRDIKPANIFLDHN---GVIKLGDFGCAVKLKNNTTTMGEEVQSLAGTPAYMAP  172 (264)
T ss_pred             HHHHHHHHHHHHHH--HHHHHCCcccCCCCHHHEEECCC---CCEEEcccccccccCCCCCcccccccCCcCCcCccCh
Confidence            57788899999999  99999999999999999999884   7899999999877643222     1234677778876

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4

>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases

Probab=99.22  E-value=2.6e-11  Score=74.93  Aligned_cols=54  Identities=17%  Similarity=0.286  Sum_probs=47.3

Q ss_pred             hcH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceec
Q psy8010          11 RIP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHL   69 (87)
Q Consensus        11 ~~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~   69 (87)
                      .++ ..+..++.|++.++  .|+|+.+++|+|++|.|+++..+   ..+++.|||++...
T Consensus        99 ~l~~~~~~~~~~qi~~~l--~~lH~~~i~H~dlkp~Nili~~~---~~~~l~dfg~~~~~  153 (316)
T cd05574          99 CLSEEVARFYAAEVLLAL--EYLHLLGIVYRDLKPENILLHES---GHIMLSDFDLSKQS  153 (316)
T ss_pred             ccCHHHHHHHHHHHHHHH--HHHHHCCeeccCCChHHeEEcCC---CCEEEeecchhhcc
Confidence            345 46788899999999  99999999999999999999985   78999999987654

Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin

>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases

Probab=99.22  E-value=4e-11  Score=71.98  Aligned_cols=51  Identities=10%  Similarity=0.264  Sum_probs=46.8

Q ss_pred             HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceec
Q psy8010          14 RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHL   69 (87)
Q Consensus        14 ~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~   69 (87)
                      ..+..++.|++.++  .++|..+++|+|++|.|++++.+   ..++++|||.++..
T Consensus       102 ~~~~~~~~qi~~~l--~~lh~~~i~H~di~p~Nili~~~---~~~~l~d~g~~~~~  152 (256)
T cd05039         102 AQQLGFALDVCEGM--EYLEEKNFVHRDLAARNVLVSED---LVAKVSDFGLAKEA  152 (256)
T ss_pred             HHHHHHHHHHHHHH--HHHHhCCccchhcccceEEEeCC---CCEEEccccccccc
Confidence            57888999999999  99999999999999999999874   77999999998865

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk

>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2

Probab=99.22  E-value=2.6e-11  Score=74.93  Aligned_cols=69  Identities=25%  Similarity=0.376  Sum_probs=56.7

Q ss_pred             hcH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCccccccccccccccC
Q psy8010          11 RIP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDVDVREILGTPDYVGE   87 (87)
Q Consensus        11 ~~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~~~~~~~gt~~y~aP   87 (87)
                      .++ ..+..++.|++.++  .++|..+++|+|++|.|++++.+   ..++++|||++......   ....|++.|+||
T Consensus       111 ~l~~~~~~~~~~~l~~~l--~~LH~~~i~H~dl~p~nil~~~~---~~~kl~dfg~~~~~~~~---~~~~~~~~y~aP  180 (308)
T cd06634         111 PLQEVEIAAVTHGALQGL--AYLHSHNMIHRDVKAGNILLSEP---GLVKLGDFGSASIMAPA---NXFVGTPYWMAP  180 (308)
T ss_pred             CCCHHHHHHHHHHHHHHH--HHHHhCCcccCCCCHHhEEECCC---CcEEECCcccceeecCc---ccccCCccccCH
Confidence            345 47788899999999  99999999999999999999874   78999999988765332   234677788876

Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin

>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases

Probab=99.22  E-value=2.8e-11  Score=73.40  Aligned_cols=72  Identities=22%  Similarity=0.471  Sum_probs=59.1

Q ss_pred             hcH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCc-cccccccccccccC
Q psy8010          11 RIP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDV-DVREILGTPDYVGE   87 (87)
Q Consensus        11 ~~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~-~~~~~~gt~~y~aP   87 (87)
                      .++ +.+..++.|++.++  .++|..+++|+|++|.|++++..   ..++++|||++..+.... ......|++.|+||
T Consensus        97 ~l~~~~~~~i~~~i~~~l--~~lh~~~i~H~dl~p~ni~i~~~---~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~aP  170 (277)
T cd06917          97 PIAEKYISVIIREVLVAL--KYIHKVGVIHRDIKAANILVTNT---GNVKLCDFGVAALLNQNSSKRSTFVGTPYWMAP  170 (277)
T ss_pred             CCCHHHHHHHHHHHHHHH--HHHHhCCcccCCcCHHHEEEcCC---CCEEEccCCceeecCCCccccccccCCcceeCH
Confidence            344 57888999999999  99999999999999999999985   789999999988764332 22345788888887

Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent

>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases

Probab=99.22  E-value=3.7e-11  Score=72.85  Aligned_cols=55  Identities=16%  Similarity=0.331  Sum_probs=48.7

Q ss_pred             hcH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecC
Q psy8010          11 RIP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLS   70 (87)
Q Consensus        11 ~~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~   70 (87)
                      .++ +.+..++.|++.++  .++|+.+++|+|++|.|++++.+   ..++++|||.+....
T Consensus       105 ~~~~~~~~~~~~~l~~aL--~~lH~~~i~H~dl~p~nil~~~~---~~~~l~dfg~~~~~~  160 (284)
T cd05038         105 QINLKRLLLFSSQICKGM--DYLGSQRYIHRDLAARNILVESE---DLVKISDFGLAKVLP  160 (284)
T ss_pred             ccCHHHHHHHHHHHHHHH--HHHHhCCeecCCCCHHhEEEcCC---CCEEEcccccccccc
Confidence            344 46788999999999  99999999999999999999885   789999999988764

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut

>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase

Probab=99.22  E-value=3.9e-11  Score=72.27  Aligned_cols=69  Identities=10%  Similarity=0.198  Sum_probs=54.0

Q ss_pred             HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCccc--cccccccccccC
Q psy8010          14 RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDVDV--REILGTPDYVGE   87 (87)
Q Consensus        14 ~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~~~--~~~~gt~~y~aP   87 (87)
                      +.+..++.|++.++  .++|+.+++|+|++|.|++++..   ..++++|||.+..+......  ....++..|+||
T Consensus       102 ~~~~~~~~~l~~aL--~~lH~~~i~H~dl~p~ni~i~~~---~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~y~~P  172 (260)
T cd05073         102 PKLIDFSAQIAEGM--AFIEQRNYIHRDLRAANILVSAS---LVCKIADFGLARVIEDNEYTAREGAKFPIKWTAP  172 (260)
T ss_pred             HHHHHHHHHHHHHH--HHHHhCCccccccCcceEEEcCC---CcEEECCCcceeeccCCCcccccCCcccccccCH
Confidence            46788899999999  99999999999999999999875   78999999998765432221  122344557776

Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa

>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10

Probab=99.22  E-value=3.3e-11  Score=72.82  Aligned_cols=71  Identities=17%  Similarity=0.349  Sum_probs=58.8

Q ss_pred             cH-HHHHHHHHHHHHHHHHHHhhh-CCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCccccccccccccccC
Q psy8010          12 IP-RLVAKVTVTLLGSLNHHFTST-HSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDVDVREILGTPDYVGE   87 (87)
Q Consensus        12 ~~-~~~~~~~~q~~~~l~~~~~h~-~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~~~~~~~gt~~y~aP   87 (87)
                      ++ +.+..++.|++.++  .++|. .+++|+|++|.|+++..+   ..++++|||.+.............|+..|++|
T Consensus       110 ~~~~~~~~~~~~l~~~l--~~lh~~~~i~H~dl~~~nil~~~~---~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~P  182 (269)
T cd08528         110 FTEERIWNIFVQMVLAL--RYLHKEKRIVHRDLTPNNIMLGED---DKVTITDFGLAKQKQPESKLTSVVGTILYSCP  182 (269)
T ss_pred             CCHHHHHHHHHHHHHHH--HHhccCCceeecCCCHHHEEECCC---CcEEEecccceeecccccccccccCcccCcCh
Confidence            44 47888999999999  99996 789999999999999885   78999999998876544444556778888887

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.

>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6

Probab=99.21  E-value=2.5e-11  Score=76.08  Aligned_cols=73  Identities=22%  Similarity=0.310  Sum_probs=57.3

Q ss_pred             hcH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCcc----ccccccccccc
Q psy8010          11 RIP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDVD----VREILGTPDYV   85 (87)
Q Consensus        11 ~~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~~----~~~~~gt~~y~   85 (87)
                      .++ ..+..++.|++.|+  .|+|..+++|+|++|+|++++..  +..++++|||.+........    .....|+..|+
T Consensus       110 ~l~~~~~~~~~~qi~~aL--~~LH~~givH~dikp~Nili~~~--~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~  185 (342)
T cd07854         110 PLSEEHARLFMYQLLRGL--KYIHSANVLHRDLKPANVFINTE--DLVLKIGDFGLARIVDPHYSHKGYLSEGLVTKWYR  185 (342)
T ss_pred             CCCHHHHHHHHHHHHHHH--HHHHhCCcccCCCCHHHEEEcCC--CceEEECCcccceecCCcccccccccccccccccc
Confidence            345 57889999999999  99999999999999999999864  35789999999876532211    12336777888


Q ss_pred             cC
Q psy8010          86 GE   87 (87)
Q Consensus        86 aP   87 (87)
                      ||
T Consensus       186 aP  187 (342)
T cd07854         186 SP  187 (342)
T ss_pred             CH
Confidence            87

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi

>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases

Probab=99.21  E-value=4.6e-11  Score=71.27  Aligned_cols=72  Identities=25%  Similarity=0.407  Sum_probs=58.4

Q ss_pred             hcH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCcc-ccccccccccccC
Q psy8010          11 RIP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDVD-VREILGTPDYVGE   87 (87)
Q Consensus        11 ~~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~~-~~~~~gt~~y~aP   87 (87)
                      .++ +.+..++.|++.++  .++|+.+++|+|++|.|++++..   ..++++|||.+........ .....|+..|+||
T Consensus        95 ~l~~~~~~~~~~~i~~~l--~~lH~~~i~H~dl~p~ni~i~~~---~~~~l~d~~~~~~~~~~~~~~~~~~~~~~y~~p  168 (254)
T cd06627          95 PFPESLVAVYVYQVLQGL--AYLHEQGVIHRDIKAANILTTKD---GVVKLADFGVATKLNDVSKDDASVVGTPYWMAP  168 (254)
T ss_pred             CCCHHHHHHHHHHHHHHH--HHHhhCCcccCCCCHHHEEECCC---CCEEEeccccceecCCCcccccccccchhhcCH
Confidence            344 57788999999999  99999999999999999999874   7899999999887644332 2345677778876

Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast

>KOG1989|consensus

Probab=99.21  E-value=2.4e-11  Score=82.21  Aligned_cols=55  Identities=20%  Similarity=0.315  Sum_probs=48.7

Q ss_pred             hhcH-HHHHHHHHHHHHHHHHHHhhhCC--ceecCCCCCceEeeeCCCCCcEEEEeeccceec
Q psy8010          10 ARIP-RLVAKVTVTLLGSLNHHFTSTHS--LYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHL   69 (87)
Q Consensus        10 ~~~~-~~~~~~~~q~~~~l~~~~~h~~~--~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~   69 (87)
                      .+++ .++..++++++.|+  .+||...  ++|||+|.+|+|++.+   +..|+||||-+...
T Consensus       139 ~~lte~eVLkIf~dv~~AV--a~mH~~~pPiIHRDLKiENvLls~~---g~~KLCDFGSatt~  196 (738)
T KOG1989|consen  139 TRLTEDEVLKIFYDVCEAV--AAMHYLKPPIIHRDLKIENVLLSAD---GNYKLCDFGSATTK  196 (738)
T ss_pred             ccCChHHHHHHHHHHHHHH--HHHhcCCCccchhhhhhhheEEcCC---CCEEeCcccccccc
Confidence            3455 48999999999999  9999988  9999999999999996   78999999987643

>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase

Probab=99.21  E-value=5e-11  Score=71.53  Aligned_cols=51  Identities=14%  Similarity=0.296  Sum_probs=46.0

Q ss_pred             HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceec
Q psy8010          14 RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHL   69 (87)
Q Consensus        14 ~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~   69 (87)
                      ..+..++.|++.++  .++|+.+++|+|++|.|++++.+   ..++++|||++...
T Consensus       100 ~~~~~~~~qi~~al--~~lH~~~~~H~dl~p~nili~~~---~~~kl~Dfg~~~~~  150 (254)
T cd05083         100 IQLLQFSLDVAEGM--EYLESKKLVHRDLAARNILVSED---GVAKVSDFGLARVG  150 (254)
T ss_pred             HHHHHHHHHHHHHH--HHHHhCCeeccccCcceEEEcCC---CcEEECCCccceec
Confidence            46788899999999  99999999999999999999875   68999999988754

Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki

>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase

Probab=99.21  E-value=4.4e-11  Score=72.99  Aligned_cols=69  Identities=20%  Similarity=0.286  Sum_probs=56.1

Q ss_pred             HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCccc--cccccccccccC
Q psy8010          14 RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDVDV--REILGTPDYVGE   87 (87)
Q Consensus        14 ~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~~~--~~~~gt~~y~aP   87 (87)
                      ..+..++.|++.++  .++|+.+++|+|++|.|+++..+   ..++++|||+++........  ....|++.|+||
T Consensus       105 ~~~~~~~~ql~~~l--~~lH~~~~~H~dl~p~nil~~~~---~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~aP  175 (288)
T cd05583         105 SEVRVYIAEIVLAL--DHLHQLGIIYRDIKLENILLDSE---GHVVLTDFGLSKEFLAEEEERAYSFCGTIEYMAP  175 (288)
T ss_pred             HHHHHHHHHHHHHH--HHHHHCCeeccCCCHHHeEECCC---CCEEEEECccccccccccccccccccCCccccCH
Confidence            46788889999999  99999999999999999999874   78999999998765433221  234678888876

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines

>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4

Probab=99.20  E-value=3.2e-11  Score=74.14  Aligned_cols=69  Identities=25%  Similarity=0.475  Sum_probs=56.8

Q ss_pred             HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCc-cccccccccccccC
Q psy8010          14 RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDV-DVREILGTPDYVGE   87 (87)
Q Consensus        14 ~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~-~~~~~~gt~~y~aP   87 (87)
                      +.+..++.|++.++  .++|+.+++|+|++|.|++++.+   ..++++|||++....... ......|++.|+||
T Consensus       116 ~~~~~~~~ql~~~l--~~lH~~givH~dl~p~Nilv~~~---~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~~p  185 (292)
T cd06657         116 EQIAAVCLAVLKAL--SVLHAQGVIHRDIKSDSILLTHD---GRVKLSDFGFCAQVSKEVPRRKSLVGTPYWMAP  185 (292)
T ss_pred             HHHHHHHHHHHHHH--HHHHHCCeecCCCCHHHEEECCC---CCEEEcccccceecccccccccccccCccccCH
Confidence            46788999999999  99999999999999999999875   679999999887654322 22345778888886

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo

>PTZ00024 cyclin-dependent protein kinase; Provisional

Probab=99.20  E-value=4.7e-11  Score=74.41  Aligned_cols=54  Identities=19%  Similarity=0.362  Sum_probs=48.0

Q ss_pred             cH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecC
Q psy8010          12 IP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLS   70 (87)
Q Consensus        12 ~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~   70 (87)
                      ++ +.+..++.|++.++  .++|+.+++|+|++|.|+++..+   ..++++|||++....
T Consensus       116 ~~~~~~~~~~~ql~~aL--~~LH~~~i~H~dl~~~nill~~~---~~~kl~dfg~~~~~~  170 (335)
T PTZ00024        116 LTESQVKCILLQILNGL--NVLHKWYFMHRDLSPANIFINSK---GICKIADFGLARRYG  170 (335)
T ss_pred             CCHHHHHHHHHHHHHHH--HHHHhCCeecccccHHHeEECCC---CCEEECCccceeecc
Confidence            44 57889999999999  99999999999999999999875   789999999887653

>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1

Probab=99.20  E-value=4.3e-11  Score=72.67  Aligned_cols=69  Identities=23%  Similarity=0.429  Sum_probs=56.5

Q ss_pred             HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCc-cccccccccccccC
Q psy8010          14 RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDV-DVREILGTPDYVGE   87 (87)
Q Consensus        14 ~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~-~~~~~~gt~~y~aP   87 (87)
                      +.+..++.|++.++  .|+|..+++|+|++|+|+++..+   ..+++.|||++..+.... ......|+..|+||
T Consensus       101 ~~~~~~~~~i~~~l--~~lH~~~ivH~dl~p~ni~i~~~---~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~aP  170 (277)
T cd06642         101 TYIATILREILKGL--DYLHSERKIHRDIKAANVLLSEQ---GDVKLADFGVAGQLTDTQIKRNTFVGTPFWMAP  170 (277)
T ss_pred             HHHHHHHHHHHHHH--HHHhcCCeeccCCChheEEEeCC---CCEEEccccccccccCcchhhhcccCcccccCH
Confidence            57888899999999  99999999999999999999874   789999999987654322 22334677888876

Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25

>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase

Probab=99.20  E-value=4e-11  Score=73.63  Aligned_cols=69  Identities=23%  Similarity=0.406  Sum_probs=56.6

Q ss_pred             HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCcc-ccccccccccccC
Q psy8010          14 RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDVD-VREILGTPDYVGE   87 (87)
Q Consensus        14 ~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~~-~~~~~gt~~y~aP   87 (87)
                      ..+..++.|++.++  .++|+++++|+|++|.|++++.+   ..++++|||++........ .....|++.|++|
T Consensus       115 ~~~~~i~~~l~~al--~~LH~~gi~H~dL~p~Nili~~~---~~~kL~dfg~~~~~~~~~~~~~~~~~~~~y~~P  184 (293)
T cd06647         115 GQIAAVCRECLQAL--EFLHSNQVIHRDIKSDNILLGMD---GSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAP  184 (293)
T ss_pred             HHHHHHHHHHHHHH--HHHHhCCEeeccCCHHHEEEcCC---CCEEEccCcceecccccccccccccCChhhcCc
Confidence            46788899999999  99999999999999999999875   7899999998876543322 2344688888887

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi

>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain

Probab=99.20  E-value=4.7e-11  Score=69.93  Aligned_cols=53  Identities=9%  Similarity=0.094  Sum_probs=46.5

Q ss_pred             hcH-HHHHHHHHHHHHHHHHHHh-hhCCceecCCCCCceEeeeCCCCCcEEEEeeccceec
Q psy8010          11 RIP-RLVAKVTVTLLGSLNHHFT-STHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHL   69 (87)
Q Consensus        11 ~~~-~~~~~~~~q~~~~l~~~~~-h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~   69 (87)
                      .++ +.+..++.|++.++  .++ |+.|++|+|+||.|++++.    ..++++|||++...
T Consensus       113 ~~~~~~~~~i~~qi~~~L--~~l~H~~giiHrDlkP~NIli~~----~~v~LiDFG~a~~~  167 (190)
T cd05147         113 PLSESKARELYLQVIQIM--RILYQDCRLVHADLSEYNLLYHD----GKLYIIDVSQSVEH  167 (190)
T ss_pred             CCCHHHHHHHHHHHHHHH--HHHHHhCCcccCCCCHHHEEEEC----CcEEEEEccccccC
Confidence            445 57899999999999  999 7999999999999999984    57999999998754

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c

>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4

Probab=99.19  E-value=6.1e-11  Score=71.81  Aligned_cols=71  Identities=10%  Similarity=0.171  Sum_probs=55.4

Q ss_pred             cH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCc--cccccccccccccC
Q psy8010          12 IP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDV--DVREILGTPDYVGE   87 (87)
Q Consensus        12 ~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~--~~~~~~gt~~y~aP   87 (87)
                      ++ +.+..++.|++.++  .|+|+.+++|+|++|.|++++..   ..++++|||++.......  ......+++.|+||
T Consensus       114 l~~~~~~~~~~~l~~~l--~~LH~~~i~H~dlkp~Nili~~~---~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~y~~P  187 (275)
T cd05046         114 LSTKQKVALCTQIALGM--DHLSNARFVHRDLAARNCLVSSQ---REVKVSLLSLSKDVYNSEYYKLRNALIPLRWLAP  187 (275)
T ss_pred             CCHHHHHHHHHHHHHHH--HHhhhcCcccCcCccceEEEeCC---CcEEEcccccccccCcccccccCCceeEEeecCh
Confidence            45 57888999999999  99999999999999999999885   789999999876432211  12334556667776

Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s

>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain

Probab=99.19  E-value=8.5e-11  Score=68.66  Aligned_cols=52  Identities=8%  Similarity=0.054  Sum_probs=46.6

Q ss_pred             HHHHHHHHHHHHHHHHHHhhh-CCceecCCCCCceEeeeCCCCCcEEEEeeccceecCC
Q psy8010          14 RLVAKVTVTLLGSLNHHFTST-HSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSR   71 (87)
Q Consensus        14 ~~~~~~~~q~~~~l~~~~~h~-~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~   71 (87)
                      +.+..++.|++.++  .++|. .|++|+|++|.|++++ +   ..++++|||++.....
T Consensus       117 ~~~~~i~~~l~~~l--~~lH~~~givHrDlkP~NIll~-~---~~~~liDFG~a~~~~~  169 (190)
T cd05145         117 EEAEELYEQVVEQM--RRLYQEAGLVHGDLSEYNILYH-D---GKPYIIDVSQAVELDH  169 (190)
T ss_pred             HHHHHHHHHHHHHH--HHHHHhCCEecCCCChhhEEEE-C---CCEEEEEcccceecCC
Confidence            57888999999999  99999 9999999999999998 3   6799999999987643

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro

>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases

Probab=99.19  E-value=1.5e-10  Score=69.05  Aligned_cols=69  Identities=22%  Similarity=0.455  Sum_probs=56.8

Q ss_pred             HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCC-ccccccccccccccC
Q psy8010          14 RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRD-VDVREILGTPDYVGE   87 (87)
Q Consensus        14 ~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~-~~~~~~~gt~~y~aP   87 (87)
                      +.+..++.|++.++  .++|+.+++|+|++|.|++++.+   ..++++|||.+...... .......|+..|+||
T Consensus        93 ~~~~~~~~qi~~~l--~~lh~~~~~H~~l~p~ni~~~~~---~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~P  162 (250)
T cd05123          93 ERARFYAAEIVLAL--EYLHSLGIIYRDLKPENILLDAD---GHIKLTDFGLAKELSSEGSRTNTFCGTPEYLAP  162 (250)
T ss_pred             HHHHHHHHHHHHHH--HHHHHCCceecCCCcceEEEcCC---CcEEEeecCcceecccCCCcccCCcCCccccCh
Confidence            57888899999999  99999999999999999999885   68999999998765433 223445677778776

Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the

>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase

Probab=99.18  E-value=9.1e-11  Score=72.30  Aligned_cols=53  Identities=23%  Similarity=0.398  Sum_probs=46.5

Q ss_pred             hcH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeecccee
Q psy8010          11 RIP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRH   68 (87)
Q Consensus        11 ~~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~   68 (87)
                      .++ +.+..++.|++.++  .|+|+.+++|+|++|.|++++..   ..++++|||+++.
T Consensus        97 ~~~~~~~~~~~~~i~~~l--~~lH~~~i~H~dl~p~NIll~~~---~~~~l~dfg~~~~  150 (305)
T cd05609          97 ALPVDMARMYFAETVLAL--EYLHNYGIVHRDLKPDNLLITSM---GHIKLTDFGLSKI  150 (305)
T ss_pred             CCCHHHHHHHHHHHHHHH--HHHHHCCccccCCchHHEEECCC---CCEEEeeCCCccc
Confidence            345 46788889999999  99999999999999999999874   7899999998763

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a

>KOG1345|consensus

Probab=99.18  E-value=4.8e-11  Score=73.32  Aligned_cols=52  Identities=29%  Similarity=0.496  Sum_probs=46.3

Q ss_pred             HHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceec
Q psy8010          15 LVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHL   69 (87)
Q Consensus        15 ~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~   69 (87)
                      ..+.++.|+++|+  .|+|+++++|||+|.+||++...+ ...+|++|||.++..
T Consensus       122 ~~K~v~~ql~SAi--~fMHsknlVHRdlK~eNiLif~~d-f~rvKlcDFG~t~k~  173 (378)
T KOG1345|consen  122 NTKKVFAQLLSAI--EFMHSKNLVHRDLKAENILIFDAD-FYRVKLCDFGLTRKV  173 (378)
T ss_pred             HHHHHHHHHHHHH--HHhhccchhhcccccceEEEecCC-ccEEEeeeccccccc
Confidence            5788999999999  999999999999999999988764 358999999988754

>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains

Probab=99.18  E-value=7.8e-11  Score=70.43  Aligned_cols=68  Identities=24%  Similarity=0.417  Sum_probs=56.1

Q ss_pred             HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCccccccccccccccC
Q psy8010          14 RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDVDVREILGTPDYVGE   87 (87)
Q Consensus        14 ~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~~~~~~~gt~~y~aP   87 (87)
                      +.+..++.|++.++  .++|+.+++|+|++|.|++++..   ..++++|||++...... ......|++.|++|
T Consensus       103 ~~~~~~~~~l~~al--~~lh~~~i~h~~l~~~ni~~~~~---~~~kl~d~g~~~~~~~~-~~~~~~~~~~~~~P  170 (256)
T cd08530         103 QEIWRIFIQLLRGL--QALHEQKILHRDLKSANILLVAN---DLVKIGDLGISKVLKKN-MAKTQIGTPHYMAP  170 (256)
T ss_pred             HHHHHHHHHHHHHH--HHHhhCCcccCCCCcceEEEecC---CcEEEeeccchhhhccC-CcccccCCccccCH
Confidence            46789999999999  99999999999999999999984   77999999998766443 22334677777776

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an

>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases

Probab=99.17  E-value=5.1e-11  Score=71.61  Aligned_cols=52  Identities=12%  Similarity=0.307  Sum_probs=47.3

Q ss_pred             HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecC
Q psy8010          14 RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLS   70 (87)
Q Consensus        14 ~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~   70 (87)
                      +.+..++.|++.++  .++|+.+++|+|++|.|++++.+   ..++++|||++..+.
T Consensus       103 ~~~~~~~~~i~~al--~~lh~~~i~h~di~p~nili~~~---~~~~l~d~g~~~~~~  154 (261)
T cd05034         103 PQLVDMAAQIAEGM--AYLESRNYIHRDLAARNILVGEN---LVCKIADFGLARLIE  154 (261)
T ss_pred             HHHHHHHHHHHHHH--HHHHhCCcccCCcchheEEEcCC---CCEEECccccceecc
Confidence            57788999999999  99999999999999999999885   789999999987654

Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t

>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase

Probab=99.17  E-value=6.5e-11  Score=72.20  Aligned_cols=72  Identities=24%  Similarity=0.477  Sum_probs=56.5

Q ss_pred             hcH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCc-cccccccccccccC
Q psy8010          11 RIP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDV-DVREILGTPDYVGE   87 (87)
Q Consensus        11 ~~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~-~~~~~~gt~~y~aP   87 (87)
                      .++ ..+..++.|++.++  .++|+.|++|+|++|.|++++.+   ..++++|||++....... ......+++.|++|
T Consensus       112 ~l~~~~~~~i~~~i~~~L--~~lH~~gi~H~dl~p~ni~i~~~---~~~~l~d~~~~~~~~~~~~~~~~~~~~~~y~~P  185 (286)
T cd06614         112 RMNEPQIAYVCREVLQGL--EYLHSQNVIHRDIKSDNILLSKD---GSVKLADFGFAAQLTKEKSKRNSVVGTPYWMAP  185 (286)
T ss_pred             CCCHHHHHHHHHHHHHHH--HHHHhCCeeeCCCChhhEEEcCC---CCEEECccchhhhhccchhhhccccCCcccCCH
Confidence            344 47788999999999  99999999999999999999874   789999999876543221 12334567778776

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou

>KOG0610|consensus

Probab=99.17  E-value=4.2e-11  Score=76.43  Aligned_cols=56  Identities=16%  Similarity=0.239  Sum_probs=48.8

Q ss_pred             HhhhcHH-HHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeecccee
Q psy8010           8 LVARIPR-LVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRH   68 (87)
Q Consensus         8 ~~~~~~~-~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~   68 (87)
                      ..++|++ .++.|+.+++.||  +|+|..||+.||+||+||++..+   +++-++||-++..
T Consensus       172 p~~~fse~~aRFYaAEvl~AL--EYLHmlGivYRDLKPENILvred---GHIMLsDFDLS~~  228 (459)
T KOG0610|consen  172 PGKRFSESAARFYAAEVLLAL--EYLHMLGIVYRDLKPENILVRED---GHIMLSDFDLSLR  228 (459)
T ss_pred             CCCccchhhHHHHHHHHHHHH--HHHHhhceeeccCCcceeEEecC---CcEEeeecccccc
Confidence            3446774 6899999999999  99999999999999999999995   8999999976553

>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity

Probab=99.17  E-value=1.1e-10  Score=70.59  Aligned_cols=72  Identities=19%  Similarity=0.370  Sum_probs=55.3

Q ss_pred             hcH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCccc---ccccccccccc
Q psy8010          11 RIP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDVDV---REILGTPDYVG   86 (87)
Q Consensus        11 ~~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~~~---~~~~gt~~y~a   86 (87)
                      .++ .....++.|++.|+  .|+|+.+++|+++.+.|++++.+   ..+|++|||++.........   ....+...|+|
T Consensus        99 ~~~~~~~~~i~~~i~~~l--~~Lh~~~iiH~~l~~~nill~~~---~~~Kl~~f~~~~~~~~~~~~~~~~~~~~~~~~~a  173 (259)
T PF07714_consen   99 PLSEQQRLSIAIQIAEAL--SYLHSNNIIHGNLSPSNILLDSN---GQVKLSDFGLSRPISEKSKYKNDSSQQLPLRYLA  173 (259)
T ss_dssp             TSBHHHHHHHHHHHHHHH--HHHHHTTEEEST-SGGGEEEETT---TEEEEESTTTGEETTTSSSEEESTTSESGGGGS-
T ss_pred             cccccccccccccccccc--ccccccccccccccccccccccc---cccccccccccccccccccccccccccccccccc
Confidence            344 57888999999999  99999999999999999999985   79999999999876322221   22345566777


Q ss_pred             C
Q psy8010          87 E   87 (87)
Q Consensus        87 P   87 (87)
                      |
T Consensus       174 P  174 (259)
T PF07714_consen  174 P  174 (259)
T ss_dssp             H
T ss_pred             c
Confidence            6

Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....

>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk

Probab=99.17  E-value=7.7e-11  Score=70.94  Aligned_cols=69  Identities=10%  Similarity=0.197  Sum_probs=54.4

Q ss_pred             HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCccc--cccccccccccC
Q psy8010          14 RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDVDV--REILGTPDYVGE   87 (87)
Q Consensus        14 ~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~~~--~~~~gt~~y~aP   87 (87)
                      +++..++.|++.++  .++|+.+++|+|++|.|++++.+   ..++++|||++.........  ....++..|+||
T Consensus       102 ~~~~~i~~~i~~al--~~LH~~~i~H~dl~p~ni~i~~~---~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~~p  172 (260)
T cd05067         102 NKLIDMAAQIAEGM--AFIERKNYIHRDLRAANILVSET---LCCKIADFGLARLIEDNEYTAREGAKFPIKWTAP  172 (260)
T ss_pred             HHHHHHHHHHHHHH--HHHhcCCeecccccHHhEEEcCC---CCEEEccCcceeecCCCCcccccCCcccccccCH
Confidence            46788899999999  99999999999999999999985   78999999998765422211  123445567776

Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr

>KOG0196|consensus

Probab=99.17  E-value=2.3e-11  Score=82.60  Aligned_cols=81  Identities=15%  Similarity=0.240  Sum_probs=66.0

Q ss_pred             hhHHHHHhhhcH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCc-cc-ccc
Q psy8010           2 TNFIITLVARIP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDV-DV-REI   78 (87)
Q Consensus         2 ~~~~~~~~~~~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~-~~-~~~   78 (87)
                      +.|+|.-.+.|. .+...+.+-+..++  .|+...+++|||+...|||++.+   --+|++|||+++.+.++. .. .+.
T Consensus       718 DsFLR~~DGqftviQLVgMLrGIAsGM--kYLsdm~YVHRDLAARNILVNsn---LvCKVsDFGLSRvledd~~~~ytt~  792 (996)
T KOG0196|consen  718 DSFLRQNDGQFTVIQLVGMLRGIASGM--KYLSDMNYVHRDLAARNILVNSN---LVCKVSDFGLSRVLEDDPEAAYTTL  792 (996)
T ss_pred             HHHHhhcCCceEeehHHHHHHHHHHHh--HHHhhcCchhhhhhhhheeeccc---eEEEeccccceeecccCCCcccccc
Confidence            568898889998 68999999999999  99999999999999999999995   789999999999775443 22 232


Q ss_pred             ccc--cccccC
Q psy8010          79 LGT--PDYVGE   87 (87)
Q Consensus        79 ~gt--~~y~aP   87 (87)
                      -|.  ..|.||
T Consensus       793 GGKIPiRWTAP  803 (996)
T KOG0196|consen  793 GGKIPIRWTAP  803 (996)
T ss_pred             CCccceeecCh
Confidence            332  446665

>KOG0576|consensus

Probab=99.17  E-value=2.3e-11  Score=81.42  Aligned_cols=72  Identities=26%  Similarity=0.460  Sum_probs=61.2

Q ss_pred             hcHH-HHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCc-cccccccccccccC
Q psy8010          11 RIPR-LVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDV-DVREILGTPDYVGE   87 (87)
Q Consensus        11 ~~~~-~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~-~~~~~~gt~~y~aP   87 (87)
                      .++| ++..++++.+.++  .|+|++|-+|||+|-.|++++..   +.+|++|||.+-.+.... ....+.|||+||||
T Consensus       108 plselqiayvcRetl~gl--~ylhs~gk~hRdiKGanilltd~---gDvklaDfgvsaqitati~KrksfiGtpywmap  181 (829)
T KOG0576|consen  108 PLSELQIAYVCRETLQGL--KYLHSQGKIHRDIKGANILLTDE---GDVKLADFGVSAQITATIAKRKSFIGTPYWMAP  181 (829)
T ss_pred             cchhHHHHHHHhhhhccc--hhhhcCCcccccccccceeeccc---CceeecccCchhhhhhhhhhhhcccCCccccch
Confidence            3454 7889999999999  99999999999999999999996   889999999877653322 33678999999998

>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1

Probab=99.16  E-value=6.5e-11  Score=70.98  Aligned_cols=69  Identities=29%  Similarity=0.449  Sum_probs=56.4

Q ss_pred             HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCcc-ccccccccccccC
Q psy8010          14 RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDVD-VREILGTPDYVGE   87 (87)
Q Consensus        14 ~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~~-~~~~~gt~~y~aP   87 (87)
                      ..+..++.|++.++  .++|+.+++|+|++|.|++++.+   ..++++|||++........ .....|++.|+||
T Consensus       101 ~~~~~~~~~l~~~l--~~lh~~~i~h~~l~~~nil~~~~---~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~p  170 (256)
T cd08218         101 DQILDWFVQICLAL--KHVHDRKILHRDIKSQNIFLTKD---GTIKLGDFGIARVLNSTVELARTCIGTPYYLSP  170 (256)
T ss_pred             HHHHHHHHHHHHHH--HHHHhCCEecCCCCHHHEEEcCC---CCEEEeeccceeecCcchhhhhhccCCccccCH
Confidence            46788899999999  99999999999999999999875   6899999999886643222 2344677778876

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti

>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase

Probab=99.16  E-value=8.2e-11  Score=70.07  Aligned_cols=69  Identities=22%  Similarity=0.380  Sum_probs=57.5

Q ss_pred             HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCcc---ccccccccccccC
Q psy8010          14 RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDVD---VREILGTPDYVGE   87 (87)
Q Consensus        14 ~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~~---~~~~~gt~~y~aP   87 (87)
                      +.+..++.|++.++  .++|+.+++|+|++|.|++++.+   ..++++|||.+........   .....++..|++|
T Consensus       101 ~~~~~~~~~l~~~l--~~lh~~~~~h~dl~p~ni~i~~~---~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~y~~p  172 (260)
T cd06606         101 PVIRKYTRQILEGL--AYLHSNGIVHRDIKGANILVDSD---GVVKLADFGCAKRLGDIETGEGTGSVRGTPYWMAP  172 (260)
T ss_pred             HHHHHHHHHHHHHH--HHHHHCCccccCCCHHHEEEcCC---CCEEEcccccEEecccccccccccCCCCCccccCH
Confidence            57888999999999  99999999999999999999984   7899999999887654432   3345677778776

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK

>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha

Probab=99.16  E-value=1.1e-10  Score=72.72  Aligned_cols=71  Identities=7%  Similarity=0.127  Sum_probs=53.3

Q ss_pred             cH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCC-Ccc-------cccccccc
Q psy8010          12 IP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSR-DVD-------VREILGTP   82 (87)
Q Consensus        12 ~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~-~~~-------~~~~~gt~   82 (87)
                      ++ ..+..++.|++.|+  .|+|+++++|+|++|.|++++.+   ..+++.||+....... +..       .....++.
T Consensus        98 l~~~~~~~i~~qi~~~L--~~LH~~~iiH~dlkp~Nil~~~~---~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  172 (327)
T cd08227          98 MSELAIAYILQGVLKAL--DYIHHMGYVHRSVKASHILISVD---GKVYLSGLRSNLSMINHGQRLRVVHDFPKYSVKVL  172 (327)
T ss_pred             CCHHHHHHHHHHHHHHH--HHHHHCCEecCCCChhhEEEecC---CcEEEcccchhhcccccccccccccccccccccee
Confidence            55 47888999999999  99999999999999999999885   6789999875443211 110       11235566


Q ss_pred             ccccC
Q psy8010          83 DYVGE   87 (87)
Q Consensus        83 ~y~aP   87 (87)
                      .|+||
T Consensus       173 ~y~aP  177 (327)
T cd08227         173 PWLSP  177 (327)
T ss_pred             cccCh
Confidence            78887

Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype

>PRK12274 serine/threonine protein kinase; Provisional

Probab=99.16  E-value=9e-11  Score=69.85  Aligned_cols=49  Identities=8%  Similarity=-0.004  Sum_probs=42.7

Q ss_pred             HHHHHHHHHHHHHHHhhhCCceecCC-CCCceEeeeCCCCCcEEEEeeccceecC
Q psy8010          17 AKVTVTLLGSLNHHFTSTHSLYRSCS-QPQNLVLTGEYPDCDVKLCDFGISRHLS   70 (87)
Q Consensus        17 ~~~~~q~~~~l~~~~~h~~~~~h~~~-~~~~~l~~~~~~~~~~kl~dfg~~~~~~   70 (87)
                      ..+..|++.++  .++|++|++|+|+ +|.||+++.+   +.++++|||++....
T Consensus        94 ~~~~~qi~~~L--~~lH~~GIvHrDL~kp~NILv~~~---g~i~LIDFG~A~~~~  143 (218)
T PRK12274         94 LAYFRAARRLL--QQLHRCGVAHNDLAKEANWLVQED---GSPAVIDFQLAVRGN  143 (218)
T ss_pred             HHHHHHHHHHH--HHHHHCcCccCCCCCcceEEEcCC---CCEEEEECCCceecC
Confidence            45678889999  9999999999999 7999999864   679999999998654

>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11

Probab=99.15  E-value=1.1e-10  Score=70.13  Aligned_cols=68  Identities=26%  Similarity=0.427  Sum_probs=55.6

Q ss_pred             HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCcc-ccccccccccccC
Q psy8010          14 RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDVD-VREILGTPDYVGE   87 (87)
Q Consensus        14 ~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~~-~~~~~gt~~y~aP   87 (87)
                      ..+..++.|++.++  .++|+.+++|+|++|.|+++..    ..++++|||++........ .....|++.|+||
T Consensus       106 ~~~~~~~~~l~~~l--~~lH~~~i~h~~l~~~nili~~----~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~~~p  174 (260)
T cd08222         106 NQVCEWFIQLLLGV--HYMHQRRILHRDLKAKNIFLKN----NLLKIGDFGVSRLLMGSCDLATTFTGTPYYMSP  174 (260)
T ss_pred             HHHHHHHHHHHHHH--HHHHHcCccccCCChhheEeec----CCEeecccCceeecCCCcccccCCCCCcCccCH
Confidence            46788999999999  9999999999999999999975    4699999999887643322 2345677888876

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check

>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase

Probab=99.14  E-value=9e-11  Score=71.64  Aligned_cols=69  Identities=13%  Similarity=0.135  Sum_probs=53.5

Q ss_pred             HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCcc---ccccccccccccC
Q psy8010          14 RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDVD---VREILGTPDYVGE   87 (87)
Q Consensus        14 ~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~~---~~~~~gt~~y~aP   87 (87)
                      ..+..++.|++.++  .++|..+++|+|++|.|+++..+   ..++++|||++..+.....   .....+++.|+||
T Consensus       130 ~~~~~~~~~i~~aL--~~lH~~~i~H~dl~p~nil~~~~---~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aP  201 (288)
T cd05050         130 TEQLCIAKQVAAGM--AYLSERKFVHRDLATRNCLVGEN---MVVKIADFGLSRNIYSADYYKASENDAIPIRWMPP  201 (288)
T ss_pred             HHHHHHHHHHHHHH--HHHHhCCeecccccHhheEecCC---CceEECccccceecccCccccccCCCccChhhcCH
Confidence            35788999999999  99999999999999999999874   7899999999876532221   1122334557776

Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M

>KOG0194|consensus

Probab=99.14  E-value=4e-11  Score=78.17  Aligned_cols=61  Identities=16%  Similarity=0.257  Sum_probs=51.6

Q ss_pred             hHHHHHhhhcH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeecccee
Q psy8010           3 NFIITLVARIP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRH   68 (87)
Q Consensus         3 ~~~~~~~~~~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~   68 (87)
                      +|++...+.++ .+-..++.+.+.|+  .|+|+++++|||+..+|.|++.+   ..+|++|||+++.
T Consensus       250 ~~L~k~~~~v~~~ek~~~~~~AA~Gl--~YLh~k~~IHRDIAARNcL~~~~---~~vKISDFGLs~~  311 (474)
T KOG0194|consen  250 DYLKKNKKSLPTLEKLRFCYDAARGL--EYLHSKNCIHRDIAARNCLYSKK---GVVKISDFGLSRA  311 (474)
T ss_pred             HHHHhCCCCCCHHHHHHHHHHHHhHH--HHHHHCCCcchhHhHHHheecCC---CeEEeCccccccC
Confidence            45555555566 57788899999999  99999999999999999999985   5579999999874

>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4

Probab=99.14  E-value=1.3e-10  Score=70.61  Aligned_cols=69  Identities=23%  Similarity=0.402  Sum_probs=56.2

Q ss_pred             HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCc-cccccccccccccC
Q psy8010          14 RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDV-DVREILGTPDYVGE   87 (87)
Q Consensus        14 ~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~-~~~~~~gt~~y~aP   87 (87)
                      .++..++.|++.++  .++|+.+++|+|++|.|++++..   ..++++|||++....... ......++..|+||
T Consensus       101 ~~~~~~~~~l~~~l--~~lh~~~ivH~dl~p~Nil~~~~---~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~ap  170 (277)
T cd06640         101 FQIATMLKEILKGL--DYLHSEKKIHRDIKAANVLLSEQ---GDVKLADFGVAGQLTDTQIKRNTFVGTPFWMAP  170 (277)
T ss_pred             HHHHHHHHHHHHHH--HHHHhCCccCcCCChhhEEEcCC---CCEEEcccccceeccCCccccccccCcccccCH
Confidence            46788899999999  99999999999999999999875   679999999987764322 22334677778876

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter

>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3

Probab=99.13  E-value=1.5e-10  Score=70.44  Aligned_cols=69  Identities=22%  Similarity=0.406  Sum_probs=56.4

Q ss_pred             HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCc-cccccccccccccC
Q psy8010          14 RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDV-DVREILGTPDYVGE   87 (87)
Q Consensus        14 ~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~-~~~~~~gt~~y~aP   87 (87)
                      +.+..++.|++.++  .++|..+++|+|++|.|++++.+   ..++++|||++..+.... ......|+..|+||
T Consensus       101 ~~~~~~~~~l~~~l--~~lh~~~i~h~dl~p~Ni~i~~~---~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~~P  170 (277)
T cd06641         101 TQIATILREILKGL--DYLHSEKKIHRDIKAANVLLSEH---GEVKLADFGVAGQLTDTQIKRNTFVGTPFWMAP  170 (277)
T ss_pred             HHHHHHHHHHHHHH--HHHccCCeecCCCCHHhEEECCC---CCEEEeecccceecccchhhhccccCCccccCh
Confidence            57888999999999  99999999999999999999874   779999999987654322 12334677788876

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int

>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros

Probab=99.13  E-value=1.6e-10  Score=69.76  Aligned_cols=72  Identities=14%  Similarity=0.184  Sum_probs=53.9

Q ss_pred             HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCC--CCCcEEEEeeccceecCCCccc---cccccccccccC
Q psy8010          14 RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEY--PDCDVKLCDFGISRHLSRDVDV---REILGTPDYVGE   87 (87)
Q Consensus        14 ~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~--~~~~~kl~dfg~~~~~~~~~~~---~~~~gt~~y~aP   87 (87)
                      +.+..++.|++.++  .|+|+.+++|+|++|+|++++..+  ....++++|||++.........   ....++..|+||
T Consensus       106 ~~~~~~~~~l~~~l--~~lH~~~i~H~dl~p~nil~~~~~~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aP  182 (269)
T cd05044         106 KELLDICLDVAKGC--VYLEQMHFIHRDLAARNCLVSEKGYDADRVVKIGDFGLARDIYKSDYYRKEGEGLLPVRWMAP  182 (269)
T ss_pred             HHHHHHHHHHHHHH--HHHHhCCcccCCCChheEEEecCCCCCCcceEECCcccccccccccccccCcccCCCccccCH
Confidence            46778899999999  999999999999999999998752  1126999999998765322211   122445667776

Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male

>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1

Probab=99.13  E-value=1.3e-10  Score=72.53  Aligned_cols=70  Identities=20%  Similarity=0.491  Sum_probs=56.2

Q ss_pred             hcH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCccccccccccccccC
Q psy8010          11 RIP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDVDVREILGTPDYVGE   87 (87)
Q Consensus        11 ~~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~~~~~~~gt~~y~aP   87 (87)
                      .++ +.+..++.|++.++  .++|+.+++|+|++|.|+++...   ..++++|||.+.....  ......+++.|+||
T Consensus       104 ~~~~~~~~~~~~ql~~aL--~~LH~~~iiH~dl~p~Nili~~~---~~~~l~dfg~~~~~~~--~~~~~~~~~~y~aP  174 (328)
T cd07856         104 PLEKQFIQYFLYQILRGL--KYVHSAGVVHRDLKPSNILINEN---CDLKICDFGLARIQDP--QMTGYVSTRYYRAP  174 (328)
T ss_pred             CCCHHHHHHHHHHHHHHH--HHHHhCCcccCCCCHHHEeECCC---CCEEeCccccccccCC--CcCCCcccccccCc
Confidence            344 46778899999999  99999999999999999999874   7899999998875422  22344667778876

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U

>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5

Probab=99.13  E-value=1e-10  Score=70.04  Aligned_cols=70  Identities=24%  Similarity=0.369  Sum_probs=56.2

Q ss_pred             HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCcc-ccccccccccccC
Q psy8010          14 RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDVD-VREILGTPDYVGE   87 (87)
Q Consensus        14 ~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~~-~~~~~gt~~y~aP   87 (87)
                      ..+..++.|++.++  .++|+.+++|+|++|.|++++.+  ...++++|||.+........ .....|++.|+||
T Consensus       101 ~~~~~~~~~l~~~l--~~lh~~~i~H~dl~~~nil~~~~--~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~ap  171 (257)
T cd08225         101 DQILSWFVQISLGL--KHIHDRKILHRDIKSQNIFLSKN--GMVAKLGDFGIARQLNDSMELAYTCVGTPYYLSP  171 (257)
T ss_pred             HHHHHHHHHHHHHH--HHHHHCCcccccCCHHHEEEcCC--CCeEEecccccchhccCCcccccccCCCccccCH
Confidence            46888899999999  99999999999999999999875  24579999998876543322 2345688888887

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.

>KOG2052|consensus

Probab=99.09  E-value=3.5e-10  Score=72.95  Aligned_cols=69  Identities=13%  Similarity=0.249  Sum_probs=57.0

Q ss_pred             HHHHHHHHHHHHHHHHHHhhhC--------CceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCc-----ccccccc
Q psy8010          14 RLVAKVTVTLLGSLNHHFTSTH--------SLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDV-----DVREILG   80 (87)
Q Consensus        14 ~~~~~~~~q~~~~l~~~~~h~~--------~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~-----~~~~~~g   80 (87)
                      +....++.-+++||  .++|..        .+-|||+|+.||++.++   ..+-++|+|+|-....+.     .....+|
T Consensus       308 ~~ml~LalS~AsGL--aHLH~eI~GTqgKPaIAHRDlKSKNILVKkn---~~C~IADLGLAv~h~~~t~~idi~~N~rVG  382 (513)
T KOG2052|consen  308 EGMLKLALSIASGL--AHLHMEIVGTQGKPAIAHRDLKSKNILVKKN---GTCCIADLGLAVRHDSDTDTIDIPPNPRVG  382 (513)
T ss_pred             HHHHHHHHHHhhhH--HHHHHHHhcCCCCchhhccccccccEEEccC---CcEEEeeceeeEEecccCCcccCCCCCccc
Confidence            56778888889999  888863        37799999999999995   789999999998875442     2256799


Q ss_pred             ccccccC
Q psy8010          81 TPDYVGE   87 (87)
Q Consensus        81 t~~y~aP   87 (87)
                      |..||||
T Consensus       383 TKRYMAP  389 (513)
T KOG2052|consen  383 TKRYMAP  389 (513)
T ss_pred             eeeccCh
Confidence            9999998

>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1

Probab=99.09  E-value=3e-10  Score=68.69  Aligned_cols=54  Identities=19%  Similarity=0.415  Sum_probs=48.0

Q ss_pred             cH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecC
Q psy8010          12 IP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLS   70 (87)
Q Consensus        12 ~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~   70 (87)
                      ++ ..+..++.|++.++  .++|+.+++|+|++|.|+++..+   ..++++|||++....
T Consensus        99 l~~~~~~~i~~ql~~~l--~~Lh~~~~~H~dl~~~ni~i~~~---~~~~l~df~~~~~~~  153 (280)
T cd05581          99 LDEKCTRFYAAEILLAL--EYLHSKGIIHRDLKPENILLDKD---MHIKITDFGTAKVLD  153 (280)
T ss_pred             CCHHHHHHHHHHHHHHH--HHHHHCCeeecCCCHHHeEECCC---CCEEecCCccccccC
Confidence            44 57889999999999  99999999999999999999874   789999999887653

Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto

>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases

Probab=99.08  E-value=3.1e-10  Score=69.40  Aligned_cols=68  Identities=28%  Similarity=0.553  Sum_probs=54.5

Q ss_pred             HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCccccccccccccccC
Q psy8010          14 RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDVDVREILGTPDYVGE   87 (87)
Q Consensus        14 ~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~~~~~~~gt~~y~aP   87 (87)
                      ..+..++.|++.++  .|+|+.+++|+|++|.|+++..+   ..++++|||++....... .....++..|+||
T Consensus       105 ~~~~~i~~~i~~~L--~~lH~~~i~H~dl~~~nil~~~~---~~~~l~dfg~~~~~~~~~-~~~~~~~~~y~~p  172 (287)
T cd06621         105 KVLGKIAESVLKGL--SYLHSRKIIHRDIKPSNILLTRK---GQVKLCDFGVSGELVNSL-AGTFTGTSFYMAP  172 (287)
T ss_pred             HHHHHHHHHHHHHH--HHHHHCCcccCCCCHHHEEEecC---CeEEEeeccccccccccc-cccccCCccccCH
Confidence            46788999999999  99999999999999999999875   679999999987543221 1234566777776

Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>smart00750 KIND kinase non-catalytic C-lobe domain

Probab=99.08  E-value=4.3e-10  Score=64.31  Aligned_cols=68  Identities=15%  Similarity=0.133  Sum_probs=53.2

Q ss_pred             hHHHHHhhhcH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCccccccccc
Q psy8010           3 NFIITLVARIP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDVDVREILGT   81 (87)
Q Consensus         3 ~~~~~~~~~~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~~~~~~~gt   81 (87)
                      +++++....++ +++..++.|++.|+  .|+|+++      ||.|++++.+   ..+++  ||++......    ...|+
T Consensus         5 ~~l~~~~~~l~~~~~~~i~~qi~~~L--~~lH~~~------kp~Nil~~~~---~~~~~--fG~~~~~~~~----~~~g~   67 (176)
T smart00750        5 DILEVRGRPLNEEEIWAVCLQCLRAL--RELHRQA------KSGNILLTWD---GLLKL--DGSVAFKTPE----QSRVD   67 (176)
T ss_pred             HHHHHhCCCCCHHHHHHHHHHHHHHH--HHHHhcC------CcccEeEcCc---cceee--ccceEeeccc----cCCCc
Confidence            45555445577 58999999999999  9999998      9999998874   66777  9988765332    22688


Q ss_pred             cccccC
Q psy8010          82 PDYVGE   87 (87)
Q Consensus        82 ~~y~aP   87 (87)
                      +.||||
T Consensus        68 ~~y~aP   73 (176)
T smart00750       68 PYFMAP   73 (176)
T ss_pred             ccccCh
Confidence            999998

It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features

>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain

Probab=99.08  E-value=3.8e-10  Score=66.46  Aligned_cols=69  Identities=25%  Similarity=0.481  Sum_probs=58.1

Q ss_pred             HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCccccccccccccccC
Q psy8010          14 RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDVDVREILGTPDYVGE   87 (87)
Q Consensus        14 ~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~~~~~~~gt~~y~aP   87 (87)
                      +.+..++.+++.++  .++|..+++|+|++|.|++++.+   ..++++|||.+.............|++.|++|
T Consensus        87 ~~~~~~~~~l~~~l--~~lh~~~i~h~~i~~~ni~~~~~---~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~p  155 (244)
T smart00220       87 DEARFYARQILSAL--EYLHSNGIIHRDLKPENILLDED---GHVKLADFGLARQLDPGGLLTTFVGTPEYMAP  155 (244)
T ss_pred             HHHHHHHHHHHHHH--HHHHHcCeecCCcCHHHeEECCC---CcEEEccccceeeeccccccccccCCcCCCCH
Confidence            57788899999999  99999999999999999999985   78999999998876554344455677778776

Phosphotransferases. Serine or threonine-specific kinase subfamily.

>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases

Probab=99.07  E-value=2.9e-10  Score=69.37  Aligned_cols=71  Identities=27%  Similarity=0.588  Sum_probs=56.5

Q ss_pred             hcH-HHHHHHHHHHHHHHHHHHhhh-CCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCccccccccccccccC
Q psy8010          11 RIP-RLVAKVTVTLLGSLNHHFTST-HSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDVDVREILGTPDYVGE   87 (87)
Q Consensus        11 ~~~-~~~~~~~~q~~~~l~~~~~h~-~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~~~~~~~gt~~y~aP   87 (87)
                      .++ ..+..++.+++.++  .|+|. ++++|+|++|.|+++..+   ..++++|||++..+... ......|+..|+||
T Consensus        99 ~~~~~~~~~~~~~i~~~l--~~LH~~~~i~H~dl~p~nil~~~~---~~~~l~d~gl~~~~~~~-~~~~~~~~~~~~aP  171 (284)
T cd06620          99 PIPVEILGKIAVAVVEGL--TYLYNVHRIMHRDIKPSNILVNSR---GQIKLCDFGVSGELINS-IADTFVGTSTYMSP  171 (284)
T ss_pred             CCCHHHHHHHHHHHHHHH--HHHHHhcCeeccCCCHHHEEECCC---CcEEEccCCcccchhhh-ccCccccCcccCCH
Confidence            344 57889999999999  99996 689999999999999874   78999999987654322 22345788888886

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>KOG1095|consensus

Probab=99.04  E-value=2e-10  Score=80.08  Aligned_cols=69  Identities=14%  Similarity=0.229  Sum_probs=55.4

Q ss_pred             HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCccccc-c--ccccccccC
Q psy8010          14 RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDVDVRE-I--LGTPDYVGE   87 (87)
Q Consensus        14 ~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~~~~~-~--~gt~~y~aP   87 (87)
                      +....++.+++.|+  .||+++.++|||+..+|.+++..   ..+|+.|||+|+-+...+.++. .  .--..||||
T Consensus       802 ~dLl~~a~dvA~G~--~YLe~~~fvHRDLAaRNCLL~~~---r~VKIaDFGlArDiy~~~yyr~~~~a~lPvkWm~P  873 (1025)
T KOG1095|consen  802 RDLLAFALDVAKGM--NYLESKHFVHRDLAARNCLLDER---RVVKIADFGLARDIYDKDYYRKHGEAMLPVKWMPP  873 (1025)
T ss_pred             HHHHHHHHHHhhhh--HHHHhCCCcCcchhhhheeeccc---CcEEEcccchhHhhhhchheeccCccccceecCCH
Confidence            57889999999999  99999999999999999999995   7899999999995543333321 1  112468887

>KOG0590|consensus

Probab=99.04  E-value=6.3e-10  Score=74.72  Aligned_cols=69  Identities=19%  Similarity=0.229  Sum_probs=58.9

Q ss_pred             HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCC-Cc----cccccccccccccC
Q psy8010          14 RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSR-DV----DVREILGTPDYVGE   87 (87)
Q Consensus        14 ~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~-~~----~~~~~~gt~~y~aP   87 (87)
                      +++..++.|++.++  .|+|+.|+-|||+|++|+++...   +.+|++|||.+..+.- .+    .....+|+..|+||
T Consensus       420 ~e~~c~fKqL~~Gv--~y~h~~GiahrdlK~enll~~~~---g~lki~Dfg~~~vf~~~~e~~~~~~~g~~gS~pY~ap  493 (601)
T KOG0590|consen  420 LEADCFFKQLLRGV--KYLHSMGLAHRDLKLENLLVTEN---GILKIIDFGAASVFRYPWEKNIHESSGIVGSDPYLAP  493 (601)
T ss_pred             hhhhHHHHHHHHHH--HHHHhcCceeccCccccEEEecC---CceEEeecCcceeeccCcchhhhhhcCcccCCcCcCc
Confidence            57999999999999  99999999999999999999995   7999999998775522 11    22567999999987

>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]

Probab=99.03  E-value=6e-10  Score=67.15  Aligned_cols=69  Identities=23%  Similarity=0.405  Sum_probs=58.9

Q ss_pred             HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCC-cEEEEeeccceecCCCc-------cccccccccccc
Q psy8010          14 RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDC-DVKLCDFGISRHLSRDV-------DVREILGTPDYV   85 (87)
Q Consensus        14 ~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~-~~kl~dfg~~~~~~~~~-------~~~~~~gt~~y~   85 (87)
                      .....+..|++.++  .++|+.+++|||++|+|+++...   . .+++.|||.++.+....       ......|+..|+
T Consensus       101 ~~~~~~~~~~~~~l--~~~H~~~~~hrd~kp~nil~~~~---~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~t~~~~  175 (384)
T COG0515         101 SEALFILAQILSAL--EYLHSKGIIHRDIKPENILLDRD---GRVVKLIDFGLAKLLPDPGSTSSIPALPSTSVGTPGYM  175 (384)
T ss_pred             HHHHHHHHHHHHHH--HHHHhCCeeccCCCHHHeeecCC---CCeEEEeccCcceecCCCCccccccccccccccccccC
Confidence            57899999999999  99999999999999999999985   4 69999999988654332       235679999999


Q ss_pred             cC
Q psy8010          86 GE   87 (87)
Q Consensus        86 aP   87 (87)
                      +|
T Consensus       176 ~p  177 (384)
T COG0515         176 AP  177 (384)
T ss_pred             CH
Confidence            87

>KOG0200|consensus

Probab=99.02  E-value=4.9e-10  Score=75.34  Aligned_cols=69  Identities=13%  Similarity=0.245  Sum_probs=55.6

Q ss_pred             HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCcccc--cccc--ccccccC
Q psy8010          14 RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDVDVR--EILG--TPDYVGE   87 (87)
Q Consensus        14 ~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~~~~--~~~g--t~~y~aP   87 (87)
                      .....+++|++.|+  +|+.+...+|||+..+|+++..+   ..+|++|||+++.........  ...|  -..||||
T Consensus       418 ~dLlsfa~QIa~GM--e~L~~~~~vHRDLAaRNVLi~~~---~~~kIaDFGlar~~~~~~~y~~~~~~~~LP~kWmAp  490 (609)
T KOG0200|consen  418 KDLLSFAYQIANGM--EYLASVPCVHRDLAARNVLITKN---KVIKIADFGLARDHYNKDYYRTKSSAGTLPVKWMAP  490 (609)
T ss_pred             HHHHHHHHHHHHHH--HHHhhCCccchhhhhhhEEecCC---CEEEEccccceeccCCCCceEecCCCCccceeecCH
Confidence            57889999999999  99999999999999999999995   789999999999754444332  1122  2348887

>KOG1026|consensus

Probab=99.02  E-value=2.8e-10  Score=77.31  Aligned_cols=69  Identities=16%  Similarity=0.240  Sum_probs=56.7

Q ss_pred             HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCcccccc---ccccccccC
Q psy8010          14 RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDVDVREI---LGTPDYVGE   87 (87)
Q Consensus        14 ~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~~~~~~---~gt~~y~aP   87 (87)
                      .+...++.|++.||  .|+.++.++|||+..+|.+++.+   -.|||+|||+++.+...++++..   .-..+||+|
T Consensus       603 ~q~L~iA~QIAaGM--~YLs~~~FVHRDLATRNCLVge~---l~VKIsDfGLsRdiYssDYYk~~~~t~lPIRWMpp  674 (774)
T KOG1026|consen  603 SQFLHIATQIAAGM--EYLSSHHFVHRDLATRNCLVGEN---LVVKISDFGLSRDIYSSDYYKVRGNTLLPIRWMPP  674 (774)
T ss_pred             HHHHHHHHHHHHHH--HHHHhCcccccchhhhhceeccc---eEEEecccccchhhhhhhhhcccCCceeeeecCCH
Confidence            47788999999999  99999999999999999999995   88999999999976554444321   224668876

>KOG1167|consensus

Probab=99.00  E-value=7.1e-10  Score=70.73  Aligned_cols=59  Identities=17%  Similarity=0.230  Sum_probs=50.6

Q ss_pred             HHHhhhcH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeecccee
Q psy8010           6 ITLVARIP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRH   68 (87)
Q Consensus         6 ~~~~~~~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~   68 (87)
                      +++...++ .+++.+++.++.||  .++|.+||+|||+||.|++.+..  ...-.+.|||+|..
T Consensus       123 ~~l~~~l~~~~i~~Yl~~ll~Al--~~~h~~GIvHRDiKpsNFL~n~~--t~rg~LvDFgLA~~  182 (418)
T KOG1167|consen  123 RDLYRSLSLAEIRWYLRNLLKAL--AHLHKNGIVHRDIKPSNFLYNRR--TQRGVLVDFGLAQR  182 (418)
T ss_pred             HHHHhcCCHHHHHHHHHHHHHHh--hhhhccCccccCCCccccccccc--cCCceEEechhHHH
Confidence            34444555 67899999999999  99999999999999999999987  56788999999873

>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta

Probab=99.00  E-value=6.6e-10  Score=69.20  Aligned_cols=51  Identities=12%  Similarity=0.260  Sum_probs=44.2

Q ss_pred             cH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccce
Q psy8010          12 IP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISR   67 (87)
Q Consensus        12 ~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~   67 (87)
                      ++ ..+..++.|++.++  .|+|+.+++|+|++|+|+++...   ..+++.||+.+.
T Consensus        98 ~~~~~~~~~~~qi~~aL--~~lH~~~ivHrDlkp~Nill~~~---~~~~~~~~~~~~  149 (328)
T cd08226          98 MSEALIGNILFGALRGL--NYLHQNGYIHRNIKASHILISGD---GLVSLSGLSHLY  149 (328)
T ss_pred             CCHHHHHHHHHHHHHHH--HHHHhCCeecCCCCHHHEEEeCC---CcEEEechHHHh
Confidence            44 46778999999999  99999999999999999999875   679999987543

Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig

>KOG1094|consensus

Probab=98.98  E-value=7e-10  Score=73.86  Aligned_cols=69  Identities=16%  Similarity=0.245  Sum_probs=57.5

Q ss_pred             HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCccccc---cccccccccC
Q psy8010          14 RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDVDVRE---ILGTPDYVGE   87 (87)
Q Consensus        14 ~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~~~~~---~~gt~~y~aP   87 (87)
                      +....++.|+.+++  .|+.+.+++|||+.+.|++++.+   ..+|++|||+++.+..++.+..   .+-...|||+
T Consensus       637 ~~~vsi~tqiasgm--aYLes~nfVHrd~a~rNcLv~~e---~~iKiadfgmsR~lysg~yy~vqgr~vlpiRwmaw  708 (807)
T KOG1094|consen  637 APGVSICTQIASGM--AYLESLNFVHRDLATRNCLVDGE---FTIKIADFGMSRNLYSGDYYRVQGRAVLPIRWMAW  708 (807)
T ss_pred             chhHHHHHHHHHHH--HHHHhhchhhccccccceeecCc---ccEEecCcccccccccCCceeeecceeeeeeehhH
Confidence            45778999999999  99999999999999999999995   8999999999997766655532   2445677774

>smart00221 STYKc Protein kinase; unclassified specificity

Probab=98.97  E-value=2.5e-09  Score=62.60  Aligned_cols=69  Identities=26%  Similarity=0.443  Sum_probs=56.8

Q ss_pred             HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCc--cccccccccccccC
Q psy8010          14 RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDV--DVREILGTPDYVGE   87 (87)
Q Consensus        14 ~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~--~~~~~~gt~~y~aP   87 (87)
                      ..+..++.+++.++  .++|..+++|+|+++.|++++..   ..++++|||.+.......  ......++..|++|
T Consensus        98 ~~~~~~~~~l~~~l--~~lh~~~i~h~di~~~ni~v~~~---~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~~~~p  168 (225)
T smart00221       98 EEARFYLRQILEAL--EYLHSLGIVHRDLKPENILLGMD---GLVKLADFGLARFIHRDLAALLKTVKGTPFYLAP  168 (225)
T ss_pred             HHHHHHHHHHHHHH--HHHHhCCeecCCCCHHHEEEcCC---CCEEEeeCceeeEecCcccccccceeccCCcCCH
Confidence            46788899999999  99999999999999999999985   789999999988764432  33445677777776

Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.

>cd00180 PKc Catalytic domain of Protein Kinases

Probab=98.95  E-value=3.4e-09  Score=60.86  Aligned_cols=70  Identities=27%  Similarity=0.583  Sum_probs=54.0

Q ss_pred             HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCc-cccccccccccccC
Q psy8010          14 RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDV-DVREILGTPDYVGE   87 (87)
Q Consensus        14 ~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~-~~~~~~gt~~y~aP   87 (87)
                      +....++.+++.++  .++|..+++|+|++|.|+++...  ...++++||+.+....... ......+...|++|
T Consensus        92 ~~~~~~~~~l~~~l--~~lh~~~~~H~dl~~~ni~~~~~--~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~p  162 (215)
T cd00180          92 DEILRILLQILEGL--EYLHSNGIIHRDLKPENILLDSD--NGKVKLADFGLSKLLTSDKSLLKTIVGTPAYMAP  162 (215)
T ss_pred             HHHHHHHHHHHHHH--HHHHhCCeeccCCCHhhEEEeCC--CCcEEEecCCceEEccCCcchhhcccCCCCccCh
Confidence            57888999999999  99999999999999999999982  2679999999887654332 12223455556554

Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which

>smart00090 RIO RIO-like kinase

Probab=98.92  E-value=3.6e-09  Score=63.97  Aligned_cols=51  Identities=14%  Similarity=0.102  Sum_probs=45.1

Q ss_pred             HHHHHHHHHHHHHHHHHhhhCC-ceecCCCCCceEeeeCCCCCcEEEEeeccceecCC
Q psy8010          15 LVAKVTVTLLGSLNHHFTSTHS-LYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSR   71 (87)
Q Consensus        15 ~~~~~~~q~~~~l~~~~~h~~~-~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~   71 (87)
                      .+..++.|++.++  .++|.+| ++|+|++|.|+++. .   ..++++|||.+.....
T Consensus       149 ~~~~i~~qi~~~l--~~LH~~g~iiH~Dikp~NIli~-~---~~i~LiDFg~a~~~~~  200 (237)
T smart00090      149 EEFELYDDILEEM--RKLYKEGELVHGDLSEYNILVH-D---GKVVIIDVSQSVELDH  200 (237)
T ss_pred             HHHHHHHHHHHHH--HHHHhcCCEEeCCCChhhEEEE-C---CCEEEEEChhhhccCC
Confidence            5678899999999  9999999 99999999999998 3   6799999999886543

>KOG1025|consensus

Probab=98.91  E-value=2.1e-09  Score=73.94  Aligned_cols=67  Identities=15%  Similarity=0.277  Sum_probs=58.9

Q ss_pred             hhHHHHHhhhcH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCc
Q psy8010           2 TNFIITLVARIP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDV   73 (87)
Q Consensus         2 ~~~~~~~~~~~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~   73 (87)
                      -+|++.-.+++. +....+..|++.||  .|+|.++++|||+..+|+++...   ..+|+.|||+++....+.
T Consensus       785 lDyvr~hr~~igsq~lLnw~~QIAkgM--~YLe~qrlVHrdLaaRNVLVksP---~hvkitdfgla~ll~~d~  852 (1177)
T KOG1025|consen  785 LDYVREHRDNIGSQDLLNWCYQIAKGM--KYLEEQRLVHRDLAARNVLVKSP---NHVKITDFGLAKLLAPDE  852 (1177)
T ss_pred             HHHHHHhhccccHHHHHHHHHHHHHHH--HHHHhcchhhhhhhhhheeecCC---CeEEEEecchhhccCccc
Confidence            357777777777 67889999999999  99999999999999999999996   789999999999875444

>KOG4278|consensus

Probab=98.91  E-value=1.2e-09  Score=73.59  Aligned_cols=67  Identities=15%  Similarity=0.323  Sum_probs=54.6

Q ss_pred             hHHHHHhhh-cHH-HHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCcc
Q psy8010           3 NFIITLVAR-IPR-LVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDVD   74 (87)
Q Consensus         3 ~~~~~~~~~-~~~-~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~~   74 (87)
                      +|++.+... ++. ....++.|+.+++  .|+..++++|||+...|.++..+   .-+|++|||+++.+..+.+
T Consensus       352 dYLRecnr~ev~avvLlyMAtQIsSaM--eYLEkknFIHRDLAARNCLVgEn---hiVKvADFGLsRlMtgDTY  420 (1157)
T KOG4278|consen  352 DYLRECNRSEVPAVVLLYMATQISSAM--EYLEKKNFIHRDLAARNCLVGEN---HIVKVADFGLSRLMTGDTY  420 (1157)
T ss_pred             HHHHHhchhhcchhHHHHHHHHHHHHH--HHHHHhhhhhhhhhhhhcccccc---ceEEeeccchhhhhcCCce
Confidence            355554442 333 4678899999999  99999999999999999999985   7899999999998865543

>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed

Probab=98.85  E-value=6.6e-09  Score=62.87  Aligned_cols=46  Identities=13%  Similarity=0.083  Sum_probs=40.6

Q ss_pred             HHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceec
Q psy8010          19 VTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHL   69 (87)
Q Consensus        19 ~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~   69 (87)
                      .+.|++.++  .++|..|++|+|++|.|++++.+   ..++++|||.+...
T Consensus       147 ~~~~i~~~l--~~lH~~GI~HrDlkp~NILv~~~---~~v~LIDfg~~~~~  192 (239)
T PRK01723        147 QWQAIGQLI--ARFHDAGVYHADLNAHNILLDPD---GKFWLIDFDRGELR  192 (239)
T ss_pred             HHHHHHHHH--HHHHHCCCCCCCCCchhEEEcCC---CCEEEEECCCcccC
Confidence            367888999  99999999999999999999874   57999999988764

>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain

Probab=98.84  E-value=1.2e-08  Score=59.83  Aligned_cols=51  Identities=10%  Similarity=0.080  Sum_probs=44.4

Q ss_pred             HHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecC
Q psy8010          15 LVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLS   70 (87)
Q Consensus        15 ~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~   70 (87)
                      ....++.+++.++  .++|..+++|+|++|.|++++.+   ..++++|||.+....
T Consensus       126 ~~~~~~~~i~~~l--~~lh~~gi~H~Dl~p~Nill~~~---~~~~liDfg~~~~~~  176 (198)
T cd05144         126 DPEEVLDEILEEI--VKAYKHGIIHGDLSEFNILVDDD---EKIYIIDWPQMVSTD  176 (198)
T ss_pred             cHHHHHHHHHHHH--HHHHHCCCCcCCCCcccEEEcCC---CcEEEEECCccccCC
Confidence            4556788899999  99999999999999999999874   789999999987653

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom

>cd05119 RIO RIO kinase family, catalytic domain

Probab=98.81  E-value=1.3e-08  Score=58.88  Aligned_cols=52  Identities=10%  Similarity=0.058  Sum_probs=45.9

Q ss_pred             HHHHHHHHHHHHHHHHHHhhh-CCceecCCCCCceEeeeCCCCCcEEEEeeccceecCC
Q psy8010          14 RLVAKVTVTLLGSLNHHFTST-HSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSR   71 (87)
Q Consensus        14 ~~~~~~~~q~~~~l~~~~~h~-~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~   71 (87)
                      +.+..++.+++.++  .++|. .+++|+|++|.|++++ +   ..++++|||.+.....
T Consensus       114 ~~~~~~~~~~~~~l--~~lh~~~~ivH~Dl~p~Nili~-~---~~~~liDfg~a~~~~~  166 (187)
T cd05119         114 EDPEELYDQILELM--RKLYREAGLVHGDLSEYNILVD-D---GKVYIIDVPQAVEIDH  166 (187)
T ss_pred             ccHHHHHHHHHHHH--HHHhhccCcCcCCCChhhEEEE-C---CcEEEEECcccccccC
Confidence            46788899999999  99999 9999999999999999 3   6799999999876543

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct

>PRK10345 hypothetical protein; Provisional

Probab=98.79  E-value=1.9e-08  Score=59.88  Aligned_cols=52  Identities=19%  Similarity=0.158  Sum_probs=37.4

Q ss_pred             cHHHHHHHHHHHH-HHHHHHHhhhCCceecCCCCCceEeeeCC-CCCcEEEEee-ccc
Q psy8010          12 IPRLVAKVTVTLL-GSLNHHFTSTHSLYRSCSQPQNLVLTGEY-PDCDVKLCDF-GIS   66 (87)
Q Consensus        12 ~~~~~~~~~~q~~-~~l~~~~~h~~~~~h~~~~~~~~l~~~~~-~~~~~kl~df-g~~   66 (87)
                      +++.+ ..+.|++ ..+  .|+|+++|+|+|+||+||++...+ +...++++|+ |..
T Consensus       103 ~~e~~-~~~~~~L~~l~--~yLh~~~IvhrDlKp~NILl~~~~~~~~~~~LiDg~G~~  157 (210)
T PRK10345        103 YEEDV-AQLRQLLKKLK--RYLLDNRIVTMELKPQNILCQRISESEVIPVVCDNIGES  157 (210)
T ss_pred             ccHhH-HHHHHHHHHHH--HHHHHCCEeecCCCHHHEEEeccCCCCCcEEEEECCCCc
Confidence            34443 4455655 445  799999999999999999998643 2347999994 543

>KOG0199|consensus

Probab=98.77  E-value=7e-09  Score=70.53  Aligned_cols=55  Identities=22%  Similarity=0.450  Sum_probs=49.4

Q ss_pred             HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCc
Q psy8010          14 RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDV   73 (87)
Q Consensus        14 ~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~   73 (87)
                      ....+|+.|++.++  .|+.+++++|||+...|+++...   ..+||+|||+.+.+...+
T Consensus       212 ~~Lcdya~QiA~aM--~YLeskrlvHRDLAARNlllasp---rtVKI~DFGLmRaLg~ne  266 (1039)
T KOG0199|consen  212 SRLCDYAMQIAKAM--QYLESKRLVHRDLAARNLLLASP---RTVKICDFGLMRALGENE  266 (1039)
T ss_pred             HHHHHHHHHHHHHH--HHHhhhhhhhhhhhhhhheeccc---ceeeeecccceeccCCCC
Confidence            46789999999999  99999999999999999999985   789999999999775444

>KOG2345|consensus

Probab=98.76  E-value=2.6e-08  Score=60.63  Aligned_cols=50  Identities=14%  Similarity=0.157  Sum_probs=45.1

Q ss_pred             HHHHHHHHHHHHHHHHHHhhhCC--ceecCCCCCceEeeeCCCCCcEEEEeecccee
Q psy8010          14 RLVAKVTVTLLGSLNHHFTSTHS--LYRSCSQPQNLVLTGEYPDCDVKLCDFGISRH   68 (87)
Q Consensus        14 ~~~~~~~~q~~~~l~~~~~h~~~--~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~   68 (87)
                      .++..++.+++.|+  .++|...  +.|+|+||.|++++.+   ....+.|||.+..
T Consensus       127 ~~iL~if~gic~gL--~~lH~~~~~yAH~DiKP~NILls~~---~~~vl~D~GS~~~  178 (302)
T KOG2345|consen  127 AQILWIFLGICRGL--EALHEKEPPYAHRDIKPANILLSDS---GLPVLMDLGSATQ  178 (302)
T ss_pred             HHHHHHHHHHHHHH--HHHhccCCcccccCCCcceeEecCC---CceEEEeccCccc
Confidence            37888999999999  9999998  9999999999999985   7889999997664

>KOG4158|consensus

Probab=98.72  E-value=3.6e-08  Score=63.69  Aligned_cols=65  Identities=18%  Similarity=0.189  Sum_probs=49.9

Q ss_pred             ChhHHHHHhhhcH------HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCC-CCcEEEEeeccce
Q psy8010           1 MTNFIITLVARIP------RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYP-DCDVKLCDFGISR   67 (87)
Q Consensus         1 ~~~~~~~~~~~~~------~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~-~~~~kl~dfg~~~   67 (87)
                      |-+|-+++.+-+-      ....-++.|++.++  .++|.+|+-|||+|..||++.-+++ ...+.++|||++-
T Consensus       322 MkrY~~tLr~yl~~~~~s~r~~~~~laQlLEav--~hL~~hgvAhRDlKSDNiL~ElddD~~P~LVvaDFGCcL  393 (598)
T KOG4158|consen  322 MKRYRQTLREYLWTRHRSYRTGRVILAQLLEAV--THLHKHGVAHRDLKSDNILLELDDDEIPQLVVADFGCCL  393 (598)
T ss_pred             hhcchhhHHHHHhcCCCchHHHHHHHHHHHHHH--HHHHHccchhhcccccceEEEecCCCCcEEEEcccceee
Confidence            3445555544332      56788899999999  9999999999999999999886533 3457889999754

>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional

Probab=98.69  E-value=6e-08  Score=67.87  Aligned_cols=70  Identities=13%  Similarity=0.280  Sum_probs=50.4

Q ss_pred             hhhcH-HHHHHHHHHHHHHHHHHHhh---hCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCcccccccccccc
Q psy8010           9 VARIP-RLVAKVTVTLLGSLNHHFTS---THSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDVDVREILGTPDY   84 (87)
Q Consensus         9 ~~~~~-~~~~~~~~q~~~~l~~~~~h---~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~~~~~~~gt~~y   84 (87)
                      ...++ +....++.|++.|+  .|+|   +.+++|+|++|.|++++..   ...++. ++.......   .....||+.|
T Consensus       774 l~~l~~~~~~~i~~~ia~~L--~yLH~~~~~~iiH~dlkp~Nil~~~~---~~~~~~-~~~~~~~~~---~~~~~~t~~y  844 (968)
T PLN00113        774 LRNLSWERRRKIAIGIAKAL--RFLHCRCSPAVVVGNLSPEKIIIDGK---DEPHLR-LSLPGLLCT---DTKCFISSAY  844 (968)
T ss_pred             HhcCCHHHHHHHHHHHHHHH--HHhccCCCCCeecCCCCHHhEEECCC---CceEEE-ecccccccc---CCCccccccc
Confidence            33455 56788999999999  9999   6699999999999999874   344443 554433211   1233778899


Q ss_pred             ccC
Q psy8010          85 VGE   87 (87)
Q Consensus        85 ~aP   87 (87)
                      |||
T Consensus       845 ~aP  847 (968)
T PLN00113        845 VAP  847 (968)
T ss_pred             cCc
Confidence            998

>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated

Probab=98.69  E-value=3.3e-08  Score=65.69  Aligned_cols=48  Identities=10%  Similarity=0.122  Sum_probs=42.5

Q ss_pred             HHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceec
Q psy8010          16 VAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHL   69 (87)
Q Consensus        16 ~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~   69 (87)
                      ...++.+++.++  .++|..+++|+|++|.|+++..    ..++++|||+++..
T Consensus       430 ~~~~~~~i~~~L--~~lH~~giiHrDlkp~NILl~~----~~~~liDFGla~~~  477 (535)
T PRK09605        430 NPELVRKVGEIV--AKLHKAGIVHGDLTTSNFIVRD----DRLYLIDFGLGKYS  477 (535)
T ss_pred             HHHHHHHHHHHH--HHHHhCCCccCCCChHHEEEEC----CcEEEEeCcccccC
Confidence            466788999999  9999999999999999999943    67999999998764

>PRK14879 serine/threonine protein kinase; Provisional

Probab=98.66  E-value=9.2e-08  Score=56.26  Aligned_cols=48  Identities=15%  Similarity=0.233  Sum_probs=42.5

Q ss_pred             HHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeecccee
Q psy8010          15 LVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRH   68 (87)
Q Consensus        15 ~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~   68 (87)
                      ....++.+++.++  .++|..+++|+|++|.|+++..    ..++++|||.+..
T Consensus        96 ~~~~i~~~i~~~l--~~lH~~~i~H~Dl~p~Nil~~~----~~~~liDf~~a~~  143 (211)
T PRK14879         96 EELELSREIGRLV--GKLHSAGIIHGDLTTSNMILSG----GKIYLIDFGLAEF  143 (211)
T ss_pred             HHHHHHHHHHHHH--HHHHhCCcccCCCCcccEEEEC----CCEEEEECCcccC
Confidence            4567888999999  9999999999999999999983    5789999998875

>TIGR03724 arch_bud32 Kae1-associated kinase Bud32

Probab=98.63  E-value=1e-07  Score=55.66  Aligned_cols=46  Identities=11%  Similarity=0.159  Sum_probs=41.4

Q ss_pred             HHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceec
Q psy8010          18 KVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHL   69 (87)
Q Consensus        18 ~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~   69 (87)
                      .++.+++.++  .++|..+++|+|++|.|+++. .   ..+++.|||++...
T Consensus        94 ~~~~~i~~~l--~~lH~~gi~H~Dl~~~Nil~~-~---~~~~liDfg~a~~~  139 (199)
T TIGR03724        94 ELLREIGRLV--GKLHKAGIVHGDLTTSNIIVR-D---DKLYLIDFGLGKYS  139 (199)
T ss_pred             HHHHHHHHHH--HHHHHCCeecCCCCcceEEEE-C---CcEEEEECCCCcCC
Confidence            6788999999  999999999999999999998 3   67999999988753

Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.

>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional

Probab=98.55  E-value=1.8e-07  Score=56.52  Aligned_cols=46  Identities=13%  Similarity=0.238  Sum_probs=39.6

Q ss_pred             HHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceec
Q psy8010          18 KVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHL   69 (87)
Q Consensus        18 ~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~   69 (87)
                      ....+++.++  ..+|..|++|+|++|.|++++..   + ++++|||.....
T Consensus       139 ~~~~~i~~~l--~~lH~~gi~H~Dikp~Nili~~~---g-i~liDfg~~~~~  184 (232)
T PRK10359        139 DVKAKIKASI--ESLHQHGMVSGDPHKGNFIVSKN---G-LRIIDLSGKRCT  184 (232)
T ss_pred             HHHHHHHHHH--HHHHHcCCccCCCChHHEEEeCC---C-EEEEECCCcccc
Confidence            3456888889  99999999999999999999874   4 999999977654

>KOG1033|consensus

Probab=98.54  E-value=1.3e-08  Score=66.75  Aligned_cols=65  Identities=18%  Similarity=0.380  Sum_probs=54.7

Q ss_pred             HHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCc-------cccccccccccccC
Q psy8010          15 LVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDV-------DVREILGTPDYVGE   87 (87)
Q Consensus        15 ~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~-------~~~~~~gt~~y~aP   87 (87)
                      ....+..|+..++  .|   ++.+|+|++|.|+.+..+   ..+|+.|||+.-......       .+..-+||++||+|
T Consensus       360 ~~~~~~~q~~~~~--~y---k~~ihrdlkp~nif~~~d---~q~kIgDFgl~ts~~~~~~~~~~~a~~t~~~gt~~YmsP  431 (516)
T KOG1033|consen  360 LMLDIFKQIAPAV--EY---KGLIHRDLKPSNIFFSDD---DQLKIGDFGLVTSQDKDETVAPAAASHTQQVGTLLYMSP  431 (516)
T ss_pred             HHHHHHHhhccch--hh---ccchhhhccccccccccc---hhhhhhhhhheeecccCCcccchhhhhhhcccccccCCH
Confidence            4677788888888  88   999999999999999985   689999999977664444       55677999999998

>KOG0603|consensus

Probab=98.52  E-value=3.6e-08  Score=65.74  Aligned_cols=65  Identities=25%  Similarity=0.239  Sum_probs=55.7

Q ss_pred             HHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCccccccccccccccC
Q psy8010          15 LVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDVDVREILGTPDYVGE   87 (87)
Q Consensus        15 ~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~~~~~~~gt~~y~aP   87 (87)
                      .++.+..+++.++  +++|+.+++++|+|++|+++..+   +.+++.|||+++...+.+   ..|||..||||
T Consensus        98 ~~~~~~aelaLal--d~lh~l~iiyrd~k~enilld~~---Ghi~~tdfglske~v~~~---~~cgt~eymAp  162 (612)
T KOG0603|consen   98 DVAFYLAELALAL--DHLHKLGIAYRDYKLENVLLLLE---GHIKLTDFGLSKEAVKEK---IACGTYEYRAP  162 (612)
T ss_pred             HHHHHHHHHHHHH--hhcchhHHHHhcccccceeeccc---CccccCCchhhhHhHhhh---hcccchhhhhh
Confidence            5777888888999  99999999999999999999985   889999999988754322   22999999997

>KOG0606|consensus

Probab=98.51  E-value=6.4e-08  Score=67.99  Aligned_cols=61  Identities=23%  Similarity=0.479  Sum_probs=48.4

Q ss_pred             HHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecC------------CCc----cccccccccccc
Q psy8010          22 TLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLS------------RDV----DVREILGTPDYV   85 (87)
Q Consensus        22 q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~------------~~~----~~~~~~gt~~y~   85 (87)
                      +++.++  +|+|..+++|+|++|.|.+++.-   +.+|+.|||+++.-.            +..    .-+..||||.|+
T Consensus       151 dmvla~--Eylh~ygivhrdlkpdnllIT~m---GhiKlTDfgLsk~GLms~atnl~eg~I~k~t~Ef~dKqvcgTPeyi  225 (1205)
T KOG0606|consen  151 DMVLAV--EYLHSYGIVHRDLKPDNLLITSM---GHIKLTDFGLSKKGLMSLATNLKEGHIEKDTHEFQDKQVCGTPEYI  225 (1205)
T ss_pred             hhhHHh--HhhccCCeecCCCCCCcceeeec---ccccccchhhhhhhhhhccchhhhcchHHHHHHhhhccccCCcccc
Confidence            346778  99999999999999999999985   899999999877420            000    114569999999


Q ss_pred             cC
Q psy8010          86 GE   87 (87)
Q Consensus        86 aP   87 (87)
                      ||
T Consensus       226 aP  227 (1205)
T KOG0606|consen  226 AP  227 (1205)
T ss_pred             Ch
Confidence            97

>KOG1024|consensus

Probab=98.33  E-value=8.2e-07  Score=57.43  Aligned_cols=56  Identities=20%  Similarity=0.191  Sum_probs=48.7

Q ss_pred             HHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCccc
Q psy8010          15 LVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDVDV   75 (87)
Q Consensus        15 ~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~~~   75 (87)
                      +...++.|+..|+  .++|+++++|+|+..+|.+++..   -.+|++|-.+++-+-+.+.+
T Consensus       397 qlV~masQla~am--~hlh~~~ViHkDiAaRNCvIdd~---LqVkltDsaLSRDLFP~DYh  452 (563)
T KOG1024|consen  397 QLVLMASQLAMAM--EHLHNHGVIHKDIAARNCVIDDQ---LQVKLTDSALSRDLFPGDYH  452 (563)
T ss_pred             HHHHHHHHHHHHH--HHHHhcCcccchhhhhcceehhh---eeEEeccchhccccCccccc
Confidence            5788899999999  99999999999999999999985   78999999998866444433

>PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A

Probab=98.28  E-value=1.4e-06  Score=54.26  Aligned_cols=45  Identities=22%  Similarity=0.248  Sum_probs=34.8

Q ss_pred             HHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceec
Q psy8010          20 TVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHL   69 (87)
Q Consensus        20 ~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~   69 (87)
                      ..|++..+  .++|.+|++|.|++|+|++++.+   +.+.+.||+.....
T Consensus       151 T~Q~I~lv--A~Lh~~GlVHgdi~~~nfll~~~---G~v~Lg~F~~~~r~  195 (288)
T PF14531_consen  151 TVQMIRLV--ANLHSYGLVHGDIKPENFLLDQD---GGVFLGDFSSLVRA  195 (288)
T ss_dssp             HHHHHHHH--HHHHHTTEEEST-SGGGEEE-TT---S-EEE--GGGEEET
T ss_pred             HHHHHHHH--HHHhhcceEecccceeeEEEcCC---CCEEEcChHHHeec
Confidence            37888888  99999999999999999999995   88999999866553

>KOG1166|consensus

Probab=98.28  E-value=2.5e-06  Score=60.12  Aligned_cols=53  Identities=23%  Similarity=0.304  Sum_probs=44.7

Q ss_pred             HHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeC----CCCCcEEEEeeccceec
Q psy8010          15 LVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGE----YPDCDVKLCDFGISRHL   69 (87)
Q Consensus        15 ~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~----~~~~~~kl~dfg~~~~~   69 (87)
                      .+..+..|++.-+  +.+|..+|||.|+||.|+++...    .++..++|+|||.+.-+
T Consensus       795 lv~~~~~qml~iv--e~lH~~~IIHgDiKPDNfll~~~~~~~~~~~~l~lIDfG~siDm  851 (974)
T KOG1166|consen  795 LVMFFSCQMLRIV--EHLHAMGIIHGDIKPDNFLLRREICADSDSKGLYLIDFGRSIDM  851 (974)
T ss_pred             hhhHHHHHHHHHH--HHHHhcceecccCCcceeEeecccCCCCcccceEEEecccceee
Confidence            5788899999999  99999999999999999998643    12455999999988744

>cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain

Probab=98.28  E-value=3.3e-06  Score=49.98  Aligned_cols=49  Identities=12%  Similarity=0.043  Sum_probs=41.9

Q ss_pred             HHHHHHHHHHHHHHHHHh-hhCCceecCCCCCceEeeeCCCCCcEEEEeeccceec
Q psy8010          15 LVAKVTVTLLGSLNHHFT-STHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHL   69 (87)
Q Consensus        15 ~~~~~~~q~~~~l~~~~~-h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~   69 (87)
                      .+..+..+++.++  ..+ |..|++|.|+++.|+++..    ..+.++|||-+-..
T Consensus       125 ~~~~i~~~i~~~l--~~l~H~~glVHGDLs~~NIL~~~----~~v~iIDF~qav~~  174 (197)
T cd05146         125 EMKNAYYQVLSMM--KQLYKECNLVHADLSEYNMLWHD----GKVWFIDVSQSVEP  174 (197)
T ss_pred             HHHHHHHHHHHHH--HHHHHhCCeecCCCCHHHEEEEC----CcEEEEECCCceeC
Confidence            4566778999999  887 8999999999999999975    57999999977654

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown.

>KOG1290|consensus

Probab=98.20  E-value=2.1e-06  Score=56.61  Aligned_cols=39  Identities=18%  Similarity=0.398  Sum_probs=35.0

Q ss_pred             cH-HHHHHHHHHHHHHHHHHHhhh-CCceecCCCCCceEeeeC
Q psy8010          12 IP-RLVAKVTVTLLGSLNHHFTST-HSLYRSCSQPQNLVLTGE   52 (87)
Q Consensus        12 ~~-~~~~~~~~q~~~~l~~~~~h~-~~~~h~~~~~~~~l~~~~   52 (87)
                      +| ..++.+++|++.||  .|||+ .|++|.|+||+|+|+...
T Consensus       184 lpl~~VK~I~~qvL~GL--dYLH~ecgIIHTDlKPENvLl~~~  224 (590)
T KOG1290|consen  184 LPLSCVKEICRQVLTGL--DYLHRECGIIHTDLKPENVLLCST  224 (590)
T ss_pred             CcHHHHHHHHHHHHHHH--HHHHHhcCccccCCCcceeeeecc
Confidence            44 57999999999999  99996 799999999999998764

>PF06293 Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family; InterPro: IPR010440 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases

Probab=98.18  E-value=9.1e-06  Score=48.18  Aligned_cols=54  Identities=13%  Similarity=0.129  Sum_probs=44.8

Q ss_pred             HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceec
Q psy8010          14 RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHL   69 (87)
Q Consensus        14 ~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~   69 (87)
                      +....++.++...+  .-+|..|++|.|+++.||++...++...+.++||..++..
T Consensus       118 ~~~~~ll~~l~~~i--~~lH~~gi~H~Dl~~~NILv~~~~~~~~~~lIDld~~~~~  171 (206)
T PF06293_consen  118 SQRRELLRALARLI--AKLHDAGIYHGDLNPSNILVDPDDGQYRFYLIDLDRMRFR  171 (206)
T ss_pred             hhHHHHHHHHHHHH--HHHHHCcCCCCCCCcccEEEeCCCCceeEEEEcchhceeC
Confidence            35677788888888  8999999999999999999998743457999999876653

Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents lipopolysaccharide kinases which are related to protein kinases IPR000719 from INTERPRO. This family includes waaP (rfaP) gene product is required for the addition of phosphate to O-4 of the first heptose residue of the lipopolysaccharide (LPS) inner core region. It has previously been shown that WaaP is necessary for resistance to hydrophobic and polycationic antimicrobials in E. coli and that it is required for virulence in invasive strains of Salmonella enterica [].; GO: 0005524 ATP binding, 0016773 phosphotransferase activity, alcohol group as acceptor, 0009103 lipopolysaccharide biosynthetic process, 0016020 membrane

>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family

Probab=98.17  E-value=7.6e-06  Score=44.92  Aligned_cols=49  Identities=12%  Similarity=0.072  Sum_probs=40.4

Q ss_pred             HHHHHHHHHHHHHHHHHhhhC---CceecCCCCCceEeeeCCCCCcEEEEeecccee
Q psy8010          15 LVAKVTVTLLGSLNHHFTSTH---SLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRH   68 (87)
Q Consensus        15 ~~~~~~~q~~~~l~~~~~h~~---~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~   68 (87)
                      .....+.++..++  ..+|..   +++|+|+++.|++++..   ..+++.||+.+..
T Consensus        87 ~~~~~~~~~~~~l--~~lh~~~~~~i~H~Dl~~~Nil~~~~---~~~~l~Df~~~~~  138 (155)
T cd05120          87 EKEDIAEQLAELL--AKLHQLPLLVLCHGDLHPGNILVDDG---KILGIIDWEYAGY  138 (155)
T ss_pred             HHHHHHHHHHHHH--HHHhCCCceEEEecCCCcceEEEECC---cEEEEEecccccC
Confidence            3455677788888  888874   69999999999999974   6899999998764

The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves

>COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms]

Probab=98.09  E-value=1.1e-05  Score=47.59  Aligned_cols=45  Identities=13%  Similarity=0.220  Sum_probs=37.8

Q ss_pred             HHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeecccee
Q psy8010          18 KVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRH   68 (87)
Q Consensus        18 ~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~   68 (87)
                      .+++.+-..+  .-+|..|++|.|+.++|+.+..    ..+.++|||++..
T Consensus        96 ~~~r~vG~~v--g~lH~~givHGDLTtsNiIl~~----~~i~~IDfGLg~~  140 (204)
T COG3642          96 DLLREVGRLV--GKLHKAGIVHGDLTTSNIILSG----GRIYFIDFGLGEF  140 (204)
T ss_pred             HHHHHHHHHH--HHHHhcCeecCCCccceEEEeC----CcEEEEECCcccc
Confidence            4556665666  7899999999999999999998    4599999999874

>cd05151 ChoK Choline Kinase (ChoK)

Probab=98.01  E-value=2.1e-05  Score=44.60  Aligned_cols=46  Identities=15%  Similarity=0.125  Sum_probs=38.0

Q ss_pred             HHHHHHHHHHHHHHHhhhCCc-----eecCCCCCceEeeeCCCCCcEEEEeecccee
Q psy8010          17 AKVTVTLLGSLNHHFTSTHSL-----YRSCSQPQNLVLTGEYPDCDVKLCDFGISRH   68 (87)
Q Consensus        17 ~~~~~q~~~~l~~~~~h~~~~-----~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~   68 (87)
                      .....++..++  ..+|..++     +|+|+++.|++++.    ..+++.||+.+..
T Consensus        86 ~~~~~~l~~~l--~~LH~~~~~~~~~~HgD~~~~Nil~~~----~~~~liDf~~a~~  136 (170)
T cd05151          86 PENLEKIAKLL--KKLHSSPLPDLVPCHNDLLPGNFLLDD----GRLWLIDWEYAGM  136 (170)
T ss_pred             HHHHHHHHHHH--HHHhCCCCCCceeecCCCCcCcEEEEC----CeEEEEecccccC
Confidence            34567788888  99999875     99999999999984    4689999998764

The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph

>PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional

Probab=97.99  E-value=2.7e-05  Score=48.08  Aligned_cols=53  Identities=9%  Similarity=0.014  Sum_probs=43.2

Q ss_pred             HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeC----CCCCcEEEEeecccee
Q psy8010          14 RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGE----YPDCDVKLCDFGISRH   68 (87)
Q Consensus        14 ~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~----~~~~~~kl~dfg~~~~   68 (87)
                      +....++.++...+  .-+|..|++|+|+.+.||++..+    ++...+.++||+.+..
T Consensus       138 ~~~~~ll~~la~~i--~~LH~~Gi~HgDL~~~NiLl~~~~~~~~~~~~~~LIDl~r~~~  194 (268)
T PRK15123        138 RLKRMLIKRVATMV--RDMHAAGINHRDCYICHFLLHLPFPGREEDLKLSVIDLHRAQI  194 (268)
T ss_pred             HHHHHHHHHHHHHH--HHHHHCcCccCCCChhhEEEeccccCCCCCceEEEEECCcccc
Confidence            35667888888888  99999999999999999999851    2236789999997753

>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase

Probab=97.98  E-value=2.5e-05  Score=51.19  Aligned_cols=39  Identities=21%  Similarity=0.356  Sum_probs=34.2

Q ss_pred             HHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCC
Q psy8010          30 HFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSR   71 (87)
Q Consensus        30 ~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~   71 (87)
                      ..+|..|++|+|++|.|+++..+   +.+++.|||++..+.+
T Consensus       271 ~ql~~~g~~H~D~hPgNilv~~~---g~i~liDfG~~~~l~~  309 (437)
T TIGR01982       271 NQVLRDGFFHADLHPGNIFVLKD---GKIIALDFGIVGRLSE  309 (437)
T ss_pred             HHHHhCCceeCCCCcccEEECCC---CcEEEEeCCCeeECCH
Confidence            67889999999999999999774   7899999999887643

This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.

>KOG0590|consensus

Probab=97.96  E-value=3.2e-06  Score=57.28  Aligned_cols=69  Identities=17%  Similarity=0.341  Sum_probs=57.7

Q ss_pred             HHHHHHHHHHHHHHHHHHhh-hCCceecCCCCCceEeeeCCCCC-cEEEEeeccceecCC--Cc--ccccccc-cccccc
Q psy8010          14 RLVAKVTVTLLGSLNHHFTS-THSLYRSCSQPQNLVLTGEYPDC-DVKLCDFGISRHLSR--DV--DVREILG-TPDYVG   86 (87)
Q Consensus        14 ~~~~~~~~q~~~~l~~~~~h-~~~~~h~~~~~~~~l~~~~~~~~-~~kl~dfg~~~~~~~--~~--~~~~~~g-t~~y~a   86 (87)
                      ..+..+..|+..++  .|+| ..++.|+|++|+|.+++..   . .++.+|||+|-.+..  +.  .....+| ++.|+|
T Consensus       123 ~~~~~~~~ql~s~l--~~~H~~~~~~h~~ikP~n~~l~~s---~~~l~~~df~~At~~~~~~g~~~~~~~~~g~s~~y~a  197 (601)
T KOG0590|consen  123 SSASRYLPQLNSGL--SYLHPENGVTHRDIKPSNSLLDES---GSALKIADFGLATAYRNKNGAERSLKDRCGSSPPYGA  197 (601)
T ss_pred             cchhhhhhhhccCc--cccCcccccccCCCCCccchhccC---CCcccCCCchhhccccccCCcceeeecccCCCCCCCC
Confidence            46788999999999  9999 9999999999999999986   4 799999999887644  22  2245688 999998


Q ss_pred             C
Q psy8010          87 E   87 (87)
Q Consensus        87 P   87 (87)
                      |
T Consensus       198 ~  198 (601)
T KOG0590|consen  198 P  198 (601)
T ss_pred             c
Confidence            7

>KOG3087|consensus

Probab=97.87  E-value=9.2e-05  Score=43.93  Aligned_cols=51  Identities=16%  Similarity=0.184  Sum_probs=43.2

Q ss_pred             HHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeecccee
Q psy8010          16 VAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRH   68 (87)
Q Consensus        16 ~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~   68 (87)
                      ...++.++-..+  .-+|..+++|.|+..+||++..++....+.++|||++..
T Consensus       115 ~~~~~~~iG~~i--gklH~ndiiHGDLTTSNill~~~~~~~~~~lIdfgls~~  165 (229)
T KOG3087|consen  115 LAELARRIGELI--GKLHDNDIIHGDLTTSNILLRSDGNQITPILIDFGLSSV  165 (229)
T ss_pred             HHHHHHHHHHHH--HHhhhCCeecccccccceEEecCCCcCceEEEeecchhc
Confidence            367788888888  899999999999999999999886545568999998764

>KOG1240|consensus

Probab=97.76  E-value=3e-05  Score=55.64  Aligned_cols=46  Identities=17%  Similarity=0.146  Sum_probs=41.0

Q ss_pred             HHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeecc
Q psy8010          15 LVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGI   65 (87)
Q Consensus        15 ~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~   65 (87)
                      +-+-++.|++.|+  .-||..|++|.|+|.+|++++.=   .++.+.||.-
T Consensus       121 EKkWiaFQLL~al--~qcH~~gVcHGDIKsENILiTSW---NW~~LtDFAs  166 (1431)
T KOG1240|consen  121 EKKWIAFQLLKAL--SQCHKLGVCHGDIKSENILITSW---NWLYLTDFAS  166 (1431)
T ss_pred             HHHHHHHHHHHHH--HHHHHcCccccccccceEEEeee---chhhhhcccc
Confidence            4566789999999  99999999999999999999984   6899999963

>PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases

Probab=97.63  E-value=0.00022  Score=41.96  Aligned_cols=51  Identities=14%  Similarity=0.162  Sum_probs=36.2

Q ss_pred             HHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecC
Q psy8010          15 LVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLS   70 (87)
Q Consensus        15 ~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~   70 (87)
                      ....+..+++..+. ..+|..|++|.|+.+.||++..    ..+.++|||-+....
T Consensus       107 ~~~~~~~~il~~~~-~~~~~~givHGDLs~~NIlv~~----~~~~iIDf~qav~~~  157 (188)
T PF01163_consen  107 EPKELLEEILEEII-KMLHKAGIVHGDLSEYNILVDD----GKVYIIDFGQAVDSS  157 (188)
T ss_dssp             THHHHHHHHHHHHH-HHHHCTTEEESS-STTSEEEET----TCEEE--GTTEEETT
T ss_pred             hHHHHHHHHHHHHH-HHHHhcCceecCCChhhEEeec----ceEEEEecCcceecC
Confidence            45566666666440 3457999999999999999997    479999999876543

Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A.

>PF06176 WaaY: Lipopolysaccharide core biosynthesis protein (WaaY); InterPro: IPR009330 This family consists of several bacterial lipopolysaccharide core biosynthesis proteins (WaaY or RfaY)

Probab=97.46  E-value=0.00042  Score=41.93  Aligned_cols=43  Identities=14%  Similarity=0.358  Sum_probs=35.4

Q ss_pred             HHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccce
Q psy8010          19 VTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISR   67 (87)
Q Consensus        19 ~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~   67 (87)
                      +..++...+  .-+|..|+.|.|.+|.|++++.    ..+++.|++.-+
T Consensus       140 ~~~ki~~~i--kqlH~~G~~HGD~hpgNFlv~~----~~i~iID~~~k~  182 (229)
T PF06176_consen  140 LAEKIVEAI--KQLHKHGFYHGDPHPGNFLVSN----NGIRIIDTQGKR  182 (229)
T ss_pred             HHHHHHHHH--HHHHHcCCccCCCCcCcEEEEC----CcEEEEECcccc
Confidence            345566677  8899999999999999999997    469999997544

The waaY, waaQ, and waaP genes are located in the central operon of the waa (formerly rfa) locus on the chromosome of Escherichia coli. This locus contains genes whose products are involved in the assembly of the core region of the lipopolysaccharide molecule. WaaY is the enzyme that phosphorylates HepII in this system [].; GO: 0009244 lipopolysaccharide core region biosynthetic process

>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed

Probab=97.18  E-value=0.00076  Score=45.53  Aligned_cols=40  Identities=18%  Similarity=0.297  Sum_probs=32.1

Q ss_pred             hhhCCceecCCCCCceEeeeCC-CCCcEEEEeeccceecCC
Q psy8010          32 TSTHSLYRSCSQPQNLVLTGEY-PDCDVKLCDFGISRHLSR   71 (87)
Q Consensus        32 ~h~~~~~h~~~~~~~~l~~~~~-~~~~~kl~dfg~~~~~~~   71 (87)
                      +...|++|+|.+|.|+++..++ .+..+++.|||+...+.+
T Consensus       276 if~~GffHaDpHPGNIlv~~~g~~~~~i~llDFGivg~l~~  316 (537)
T PRK04750        276 VFRDGFFHADMHPGNIFVSYDPPENPRYIALDFGIVGSLNK  316 (537)
T ss_pred             HHhCCeeeCCCChHHeEEecCCCCCCeEEEEecceEEECCH
Confidence            4578999999999999998752 123799999999887644

>PRK09902 hypothetical protein; Provisional

Probab=97.07  E-value=0.0015  Score=39.28  Aligned_cols=51  Identities=10%  Similarity=0.127  Sum_probs=41.7

Q ss_pred             HHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeecccee
Q psy8010          15 LVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRH   68 (87)
Q Consensus        15 ~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~   68 (87)
                      +-..++.++...+  .-+|..|+.|+|+.+.||++..++ ..++.++||.-++.
T Consensus       129 ~k~~il~~va~~i--a~LH~~Gv~Hgdly~khIll~~~g-~~~v~lIDlEk~r~  179 (216)
T PRK09902        129 VRQAMLKAVALAF--KKMHSVNRQHGCCYVRHIYVKTEG-KAEAGFLDLEKSRR  179 (216)
T ss_pred             HHHHHHHHHHHHH--HHHHHCCCcCCCCCHhheeecCCC-CeeEEEEEhhccch
Confidence            3456777888888  999999999999999999998543 34699999987664

>COG4248 Uncharacterized protein with protein kinase and helix-hairpin-helix DNA-binding domains [General function prediction only]

Probab=96.08  E-value=0.031  Score=37.50  Aligned_cols=68  Identities=10%  Similarity=0.107  Sum_probs=49.9

Q ss_pred             HHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCccccccccccccccC
Q psy8010          15 LVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDVDVREILGTPDYVGE   87 (87)
Q Consensus        15 ~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~~~~~~~gt~~y~aP   87 (87)
                      .+..+++.+..+.  --+|.+|..-.|..+++++++..   +.+.+.|----..-..+..+...+|.+.|..|
T Consensus       118 fllrvaRnlA~aF--A~lH~~Gh~vGDVn~~~~lVsd~---~~V~LVdsDsfqi~~ng~~~~cpVg~~eftPP  185 (637)
T COG4248         118 FLLRVARNLASAF--ATLHEHGHVVGDVNQNSFLVSDD---SKVVLVDSDSFQINANGTLHLCPVGVSEFTPP  185 (637)
T ss_pred             HHHHHHHHHHHHH--HHHHhcCCcccccCccceeeecC---ceEEEEcccceeeccCCceEecccCccccCCH
Confidence            4677788888888  88999999999999999999985   78888763211111334444556788877765

>COG0478 RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms]

Probab=96.05  E-value=0.018  Score=36.18  Aligned_cols=46  Identities=11%  Similarity=0.153  Sum_probs=36.5

Q ss_pred             HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeec
Q psy8010          14 RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFG   64 (87)
Q Consensus        14 ~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg   64 (87)
                      +....++..++..+  .-....|++|.|+++=|++++.+   +.+.++||-
T Consensus       202 en~~~il~~il~~~--~~~~~~GiVHGDlSefNIlV~~d---g~~~vIDwP  247 (304)
T COG0478         202 ENPDEILDKILEEV--RKAYRRGIVHGDLSEFNILVTED---GDIVVIDWP  247 (304)
T ss_pred             cCHHHHHHHHHHHH--HHHHHcCccccCCchheEEEecC---CCEEEEeCc
Confidence            34555566666666  55568999999999999999995   789999984

>KOG3741|consensus

Probab=94.94  E-value=0.11  Score=35.68  Aligned_cols=52  Identities=15%  Similarity=0.224  Sum_probs=44.1

Q ss_pred             HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecC
Q psy8010          14 RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLS   70 (87)
Q Consensus        14 ~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~   70 (87)
                      +....++.|+..++  .++|+.|+-.+.+.+.+|++..+   ..++++..|+...+.
T Consensus       393 ~~lW~y~~QLtaaL--~sIHssGLAck~L~~~kIlv~G~---~RIriS~C~i~Dvl~  444 (655)
T KOG3741|consen  393 EVLWSYISQLTAAL--YSIHSSGLACKTLDLKKILVTGK---MRIRISGCGIMDVLQ  444 (655)
T ss_pred             HHHHHHHHHHHHHH--HHHHhcCceeecccHhHeEeeCc---ceEEEecccceeeec
Confidence            47899999999999  99999999999999999999984   577777666655543

>COG1718 RIO1 Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms / Cell division and chromosome partitioning]

Probab=94.87  E-value=0.1  Score=32.49  Aligned_cols=48  Identities=6%  Similarity=-0.004  Sum_probs=39.5

Q ss_pred             HHHHHHHHHHHHHHHHHhhh-CCceecCCCCCceEeeeCCCCCcEEEEeecccee
Q psy8010          15 LVAKVTVTLLGSLNHHFTST-HSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRH   68 (87)
Q Consensus        15 ~~~~~~~q~~~~l~~~~~h~-~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~   68 (87)
                      ++..+..+++..+  .-+.. .+++|.|++.=|+++..    ..+.++|+|=|-.
T Consensus       167 e~~~~~~~~v~~~--~~l~~~a~LVHgDLSEyNiL~~~----~~p~iID~~QaV~  215 (268)
T COG1718         167 EAEGLYEDVVEYM--RRLYKEAGLVHGDLSEYNILVHD----GEPYIIDVSQAVT  215 (268)
T ss_pred             hHHHHHHHHHHHH--HHHHHhcCcccccchhhheEEEC----CeEEEEECccccc
Confidence            4677777888888  77776 99999999999999995    5788999986544

>cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins

Probab=94.74  E-value=0.075  Score=31.07  Aligned_cols=34  Identities=12%  Similarity=0.104  Sum_probs=26.3

Q ss_pred             hCCceecCCCCCceEeeeCCCCCcEEEEeecccee
Q psy8010          34 THSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRH   68 (87)
Q Consensus        34 ~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~   68 (87)
                      ...++|.|+.+.|++++.++ ...+.++||+.+..
T Consensus       173 ~~~l~HgD~~~~Nil~~~~~-~~~~~iID~e~~~~  206 (223)
T cd05154         173 RPGLVHGDYRLGNVLFHPDE-PRVVAVLDWELATL  206 (223)
T ss_pred             CcEEEECCCCcccEEEcCCC-CcEEEEEecccccc
Confidence            46789999999999998731 14578999987653

This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain

>KOG1243|consensus

Probab=94.34  E-value=0.21  Score=34.92  Aligned_cols=50  Identities=14%  Similarity=0.159  Sum_probs=42.4

Q ss_pred             HHHHHHHHHHHHHHHHHHhh-hCCceecCCCCCceEeeeCCCCCcEEEEeecccee
Q psy8010          14 RLVAKVTVTLLGSLNHHFTS-THSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRH   68 (87)
Q Consensus        14 ~~~~~~~~q~~~~l~~~~~h-~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~   68 (87)
                      +.+..-++|++.||  .|+| ..+++|.++....++++..   ++.++.+|.+.+.
T Consensus       104 ~~v~~Gl~qIl~AL--~FL~~d~~lvHgNv~~~SVfVn~~---GeWkLggle~v~~  154 (690)
T KOG1243|consen  104 EEVCLGLFQILAAL--SFLNDDCNLVHGNVCKDSVFVNES---GEWKLGGLELVSK  154 (690)
T ss_pred             HHHHHHHHHHHHHH--HHHhccCCeeeccEeeeeEEEcCC---CcEEEeeeEEEec
Confidence            35666689999999  9997 7889999999999999985   7899998876654

>KOG1023|consensus

Probab=94.18  E-value=0.066  Score=36.06  Aligned_cols=50  Identities=18%  Similarity=0.377  Sum_probs=42.0

Q ss_pred             HHHHHHHHHHHHHHHHHhhhCCc-eecCCCCCceEeeeCCCCCcEEEEeeccceec
Q psy8010          15 LVAKVTVTLLGSLNHHFTSTHSL-YRSCSQPQNLVLTGEYPDCDVKLCDFGISRHL   69 (87)
Q Consensus        15 ~~~~~~~q~~~~l~~~~~h~~~~-~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~   69 (87)
                      ....+++.++.++  .|+|...+ .|..++..|.+++..   ..+|+.|||+....
T Consensus        49 F~~s~~rdi~~Gl--~ylh~s~i~~hg~l~s~nClvd~~---w~lklt~~Gl~~~~   99 (484)
T KOG1023|consen   49 FILSFIRDISKGL--AYLHNSPIGYHGALKSSNCLVDSR---WVLKLTDFGLNSLL   99 (484)
T ss_pred             HHHHHHHHHHHHH--HHHhcCcceeeeeeccccceeeee---EEEEechhhhcccc
Confidence            3566778888899  99997655 899999999999984   78999999987654

>KOG0601|consensus

Probab=94.09  E-value=0.029  Score=38.00  Aligned_cols=49  Identities=20%  Similarity=0.286  Sum_probs=41.3

Q ss_pred             HHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccce
Q psy8010          15 LVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISR   67 (87)
Q Consensus        15 ~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~   67 (87)
                      .......|++.++  .++|+..++|.|++|.|+++..++  ...++.|+++..
T Consensus       367 ~~~~~~~q~~~~l--~~i~s~~~~~~d~~psni~i~~~~--~~~~~~~~~~~t  415 (524)
T KOG0601|consen  367 PRLRLTAQILTAL--NVIHSKLFVHLDVKPSNILISNDG--FFSKLGDFGCWT  415 (524)
T ss_pred             hhhhhHHHHHhcc--ccccchhhhcccccccceeeccch--hhhhcccccccc
Confidence            4677788999999  999999999999999999999853  566777877664

>COG0661 AarF Predicted unusual protein kinase [General function prediction only]

Probab=94.08  E-value=0.23  Score=33.82  Aligned_cols=37  Identities=22%  Similarity=0.453  Sum_probs=31.6

Q ss_pred             hhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCC
Q psy8010          32 TSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSR   71 (87)
Q Consensus        32 ~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~   71 (87)
                      +-..|+.|.|..|.|+++..+   +.+-+.|||+...+.+
T Consensus       281 ~~~dgffHaDpHpGNi~v~~~---g~i~~lDfGi~g~l~~  317 (517)
T COG0661         281 LLRDGFFHADPHPGNILVRSD---GRIVLLDFGIVGRLDP  317 (517)
T ss_pred             HHhcCccccCCCccceEEecC---CcEEEEcCcceecCCH
Confidence            456899999999999999995   7899999998776644

>PRK05231 homoserine kinase; Provisional

Probab=94.05  E-value=0.064  Score=33.62  Aligned_cols=31  Identities=13%  Similarity=0.161  Sum_probs=24.9

Q ss_pred             hCCceecCCCCCceEeeeCCCCCcEEEEeeccce
Q psy8010          34 THSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISR   67 (87)
Q Consensus        34 ~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~   67 (87)
                      ..+++|.|+.+.|+++..+   .-..+.||+.+.
T Consensus       186 p~~liHgD~~~~Nil~~~~---~~~~iIDf~~~~  216 (319)
T PRK05231        186 PRGVIHADLFRDNVLFEGD---RLSGFIDFYFAC  216 (319)
T ss_pred             CcccCCCCCCCCcEEEECC---ceEEEEeccccc
Confidence            4589999999999999863   345799998764

>cd05157 ETNK_euk Ethanolamine kinase (ETNK) in eukaryotes

Probab=93.81  E-value=0.21  Score=29.79  Aligned_cols=31  Identities=16%  Similarity=0.221  Sum_probs=25.5

Q ss_pred             CCceecCCCCCceEeeeCCCCCcEEEEeeccce
Q psy8010          35 HSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISR   67 (87)
Q Consensus        35 ~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~   67 (87)
                      .+++|.|+.+.|++++..  +..+.++||..+.
T Consensus       170 ~~l~H~Dl~~~Nil~~~~--~~~~~lIDwe~a~  200 (235)
T cd05157         170 IVFCHNDLLSGNIIYNEE--KNSVKFIDYEYAG  200 (235)
T ss_pred             EEEEcCCCCcCcEEEeCC--CCCEEEEEcccCC
Confidence            468999999999999973  2569999997654

ETNK is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major phospholipid, phosphatidylethanolamine (PtdEtn). Unlike ChoK, ETNK shows specific activity for its substrate, and displays negligible activity towards N-methylated derivatives of Etn. The Drosophila ETNK is implicated in development and neuronal function. Mammals contain two ETNK proteins, ETNK1 and ETNK2. ETNK1 selectively increases Etn uptake and phosphorylation, as well as PtdEtn synthesis. ETNK2 is found primarily in the liver and reproductive tissues. It plays a critical role in regulating placental hemostasis to support late embryo

>KOG0601|consensus

Probab=93.62  E-value=0.075  Score=36.10  Aligned_cols=55  Identities=22%  Similarity=0.312  Sum_probs=42.4

Q ss_pred             HHHHHHHHHHH----HHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCc
Q psy8010          15 LVAKVTVTLLG----SLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDV   73 (87)
Q Consensus        15 ~~~~~~~q~~~----~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~   73 (87)
                      ++.....+...    |+  .++|+..++|.|+++.|+....+  -...++.|||+...+.+..
T Consensus       219 ~l~~~~~~~~~~~~~al--~~~hs~~~~~~~~kp~~i~~~~~--~~s~~~~df~~v~~i~~~~  277 (524)
T KOG0601|consen  219 LLWNSLRDWLSRDVTAL--SHLHSNNIVHDDLKPANIFTTSD--WTSCKLTDFGLVSKISDGN  277 (524)
T ss_pred             hhhhHHhhhhhcccccc--cccCCCcccccccchhheecccc--cceeecCCcceeEEccCCc
Confidence            44455555555    89  99999999999999999999884  1568888999877665443

>TIGR02906 spore_CotS spore coat protein, CotS family

Probab=93.24  E-value=0.58  Score=29.10  Aligned_cols=29  Identities=17%  Similarity=0.261  Sum_probs=23.9

Q ss_pred             CCceecCCCCCceEeeeCCCCCcEEEEeeccce
Q psy8010          35 HSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISR   67 (87)
Q Consensus        35 ~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~   67 (87)
                      .+++|.|+.+.|++++.    ..+.+.||..+.
T Consensus       187 ~~liHgD~~~~Nil~~~----~~i~lIDfd~~~  215 (313)
T TIGR02906       187 RGFCHQDYAYHNILLKD----NEVYVIDFDYCT  215 (313)
T ss_pred             CceEcCCCCcccEEEeC----CcEEEEECcccc
Confidence            57899999999999986    357899998543

Members of this family include the spore coat proteins CotS and YtaA from Bacillus subtilis and, from other endospore-forming bacteria, homologs that are more closely related to these two than to the spore coat proteins YutH and YsxE. The CotS family is more broadly distributed than YutH or YsxE, but still is not universal among spore-formers.

>cd05155 APH_ChoK_like_1 Uncharacterized bacterial proteins with similarity to Aminoglycoside 3'-phosphotransferase (APH) and Choline kinase (ChoK) family members

Probab=93.22  E-value=0.12  Score=31.02  Aligned_cols=31  Identities=19%  Similarity=0.243  Sum_probs=24.3

Q ss_pred             hCCceecCCCCCceEeeeCCCCCcEEEEeeccce
Q psy8010          34 THSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISR   67 (87)
Q Consensus        34 ~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~   67 (87)
                      ..+++|.|+.+.|++++..   .-..+.||+.+.
T Consensus       163 ~~~l~HGD~~~~Nvlv~~~---~i~giIDw~~a~  193 (235)
T cd05155         163 PPVWFHGDLAPGNLLVQDG---RLSAVIDFGCLG  193 (235)
T ss_pred             CceEEeCCCCCCcEEEECC---CEEEEEeCcccC
Confidence            4568999999999999863   334689998754

The APH/ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates, such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides, and macrolides leads to their inactivation and to bacterial antibiotic resista

>TIGR00938 thrB_alt homoserine kinase, Neisseria type

Probab=93.08  E-value=0.35  Score=30.32  Aligned_cols=31  Identities=16%  Similarity=0.280  Sum_probs=25.5

Q ss_pred             hCCceecCCCCCceEeeeCCCCCcEEEEeeccce
Q psy8010          34 THSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISR   67 (87)
Q Consensus        34 ~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~   67 (87)
                      ..+++|.|+.+.|++++.+   ....+.||+.+.
T Consensus       186 ~~~l~HgD~~~~Nvl~~~~---~~~~vIDfd~~~  216 (307)
T TIGR00938       186 PRGVIHADLFPDNVLFDGD---SVKGVIDFYFAC  216 (307)
T ss_pred             CCccCCCCCCcCcEEEECC---ceEEEeeccccc
Confidence            4789999999999999874   445799998763

Homoserine kinase is required in the biosynthesis of threonine from aspartate.The member of this family from Pseudomonas aeruginosa was shown by direct assay and complementation to act specifically as a homoserine kinase.

>COG0510 ycfN Thiamine kinase and related kinases [Coenzyme transport and metabolism]

Probab=93.00  E-value=0.76  Score=28.67  Aligned_cols=30  Identities=23%  Similarity=0.242  Sum_probs=25.7

Q ss_pred             CCceecCCCCCceEeeeCCCCCcEEEEeeccce
Q psy8010          35 HSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISR   67 (87)
Q Consensus        35 ~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~   67 (87)
                      .-++|.|+.+.|++.+..   +.+.++||..|.
T Consensus       153 ~v~cH~Dl~~~N~l~t~~---~~l~LIDWEyAg  182 (269)
T COG0510         153 LVPCHNDLNPGNLLLTDK---GGLFLIDWEYAG  182 (269)
T ss_pred             eeeecCCCCccceEEcCC---CcEEEEecccCC
Confidence            368899999999999984   689999997654

>PF01636 APH: Phosphotransferase enzyme family This family is part of the larger protein kinase superfamily

Probab=92.96  E-value=0.11  Score=30.49  Aligned_cols=33  Identities=18%  Similarity=0.265  Sum_probs=21.5

Q ss_pred             hCCceecCCCCCceEeeeCCCCCcEEEEeecccee
Q psy8010          34 THSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRH   68 (87)
Q Consensus        34 ~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~   68 (87)
                      ...++|.|+.+.|++++..  +..+.+.||+.+..
T Consensus       165 ~~~~~HgD~~~~Nil~~~~--~~~i~iID~e~a~~  197 (239)
T PF01636_consen  165 PPVLIHGDLHPGNILVDPS--DGRIGIIDFEDAGW  197 (239)
T ss_dssp             CEEEE-SS-SGGGEEEESS--TTEEEE--GTT-EE
T ss_pred             CcEEEEeccccccceeeec--cceeEEEecccceE
Confidence            4679999999999999932  25568999987653

; InterPro: IPR002575 This entry consists of bacterial antibiotic resistance proteins, which confer resistance to various aminoglycosides they include:- aminoglycoside 3'-phosphotransferase or kanamycin kinase / neomycin-kanamycin phosphotransferase and streptomycin 3''-kinase or streptomycin 3''-phosphotransferase. The aminoglycoside phosphotransferases inactivate aminoglycoside antibiotics via phosphorylation []. The proteins are found in a range of taxonomic groups.; PDB: 2PPQ_A 2Q83_B 3TDV_B 3TDW_A 3I0O_A 3I0Q_A 3I1A_B 3Q2M_A 3HAV_C 2PUI_B ....

>cd05156 ChoK_euk Choline Kinase (ChoK) in eukaryotes

Probab=92.96  E-value=0.13  Score=31.98  Aligned_cols=33  Identities=18%  Similarity=0.167  Sum_probs=25.2

Q ss_pred             CCceecCCCCCceEeeeC-CCCCcEEEEeeccce
Q psy8010          35 HSLYRSCSQPQNLVLTGE-YPDCDVKLCDFGISR   67 (87)
Q Consensus        35 ~~~~h~~~~~~~~l~~~~-~~~~~~kl~dfg~~~   67 (87)
                      ..++|.|+.+.|+++..+ .+...+.++||..+.
T Consensus       179 ~~lcH~Dl~~~Nil~~~~~~~~~~i~lIDwEya~  212 (302)
T cd05156         179 VVFCHNDLQEGNILLLNPSSETKKLVLIDFEYAS  212 (302)
T ss_pred             ceEEecCCCcCeEEecCCCCCCCcEEEEeeCCCC
Confidence            468999999999999862 001468999998765

The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC) and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. ChoK plays an important role in cell signaling pathways and the regulation of cell growth. Along with PCho, it is involved in malignant transformation through Ras oncogenes in various human cancer

>cd05150 APH Aminoglycoside 3'-phosphotransferase (APH)

Probab=92.82  E-value=0.14  Score=30.80  Aligned_cols=30  Identities=10%  Similarity=-0.004  Sum_probs=24.8

Q ss_pred             CCceecCCCCCceEeeeCCCCCcEEEEeeccce
Q psy8010          35 HSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISR   67 (87)
Q Consensus        35 ~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~   67 (87)
                      -.++|.|+.+.|+++...   ....++||+.+.
T Consensus       163 ~~l~HgD~~~~Nil~~~~---~~~~iIDwe~a~  192 (244)
T cd05150         163 LVVTHGDACLPNIIVDPG---KFSGFIDLGRLG  192 (244)
T ss_pred             eEEECCCCCCccEEEeCC---cEEEEEEccccc
Confidence            458999999999999874   457899998764

The APH subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). APH catalyzes the transfer of the gamma-phosphoryl group from ATP to aminoglycoside antibiotics such as kanamycin, streptomycin, neomycin, and gentamicin, among others. The aminoglycoside antibiotics target the 30S ribosome and promote miscoding, leading to the production of defective proteins which insert into the bacterial membrane, resulting in membrane damage and the ultimate demise of the bacterium. Phosphorylation of the aminoglycoside antibiotics results in their inactivation, leading to bacterial antibiotic resistance. The APH gene is found on transposons and plasmids and is thought to have originated as a self-defense mechanism used by microorganisms that produce the antibio

>cd05153 HomoserineK_II Homoserine Kinase, type II

Probab=92.78  E-value=0.12  Score=31.98  Aligned_cols=30  Identities=13%  Similarity=0.155  Sum_probs=24.7

Q ss_pred             CCceecCCCCCceEeeeCCCCCcEEEEeeccce
Q psy8010          35 HSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISR   67 (87)
Q Consensus        35 ~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~   67 (87)
                      .+++|.|+.+.|++++.+   ....+.||+.+.
T Consensus       175 ~~l~HgD~~~~Nil~~~~---~~~~iIDfe~a~  204 (296)
T cd05153         175 RGVIHADLFRDNVLFDGD---ELSGVIDFYFAC  204 (296)
T ss_pred             CcCCccCcCcccEEEeCC---ceEEEeehhhhc
Confidence            579999999999999874   446799997654

Homoserine kinase is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of unusual homoserine kinases, from a subset of bacteria, which have a PK fold. These proteins do not bear any similarity to the GHMP family homoserine kinases present in most bacteria and eukaryotes. Homoserine kinase catalyzes the transfer of the gamma-phosphoryl group from ATP to L-homoserine producing L-homoserine phosphate, an intermediate in the production of the amino acids threonine, methionine, and isoleucine.

>PLN02236 choline kinase

Probab=92.65  E-value=0.45  Score=30.57  Aligned_cols=32  Identities=13%  Similarity=0.208  Sum_probs=26.0

Q ss_pred             hCCceecCCCCCceEeeeCCCCCcEEEEeeccce
Q psy8010          34 THSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISR   67 (87)
Q Consensus        34 ~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~   67 (87)
                      ...++|.|+++.|+++...  +..+.++||..+.
T Consensus       199 ~~~~cH~Dl~~~Nil~~~~--~~~~~lID~Eya~  230 (344)
T PLN02236        199 EIGFCHNDLQYGNIMIDEE--TRAITIIDYEYAS  230 (344)
T ss_pred             CceEEeCCCCcCcEEEeCC--CCcEEEEeehhcc
Confidence            3468999999999999863  2579999998765

>COG5072 ALK1 Serine/threonine kinase of the haspin family [Cell division and chromosome partitioning]

Probab=92.63  E-value=0.48  Score=31.56  Aligned_cols=49  Identities=16%  Similarity=0.177  Sum_probs=38.0

Q ss_pred             HHHHHHHHHHHHHHHHHHhhh-CCceecCCCCCceEeeeCCCCCcEEEEeecccee
Q psy8010          14 RLVAKVTVTLLGSLNHHFTST-HSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRH   68 (87)
Q Consensus        14 ~~~~~~~~q~~~~l~~~~~h~-~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~   68 (87)
                      +++..++++.+.-+  .-+.. ...-||++...|+++..    +.+.++||.+++.
T Consensus       321 ~e~lsff~s~~sil--~~lekkf~fehrnlt~~niLId~----GnvtLIDfklsRl  370 (488)
T COG5072         321 EEELSFFWSCISIL--DILEKKFPFEHRNLTLDNILIDE----GNVTLIDFKLSRL  370 (488)
T ss_pred             HHHHHHHHHHHHHH--hhhhhcCCcccccccccceeeec----CceEEEEeeeeec
Confidence            56777777766655  44443 45779999999999994    7899999999984

>PRK10271 thiK thiamine kinase; Provisional

Probab=92.37  E-value=0.19  Score=29.79  Aligned_cols=28  Identities=18%  Similarity=0.242  Sum_probs=23.3

Q ss_pred             CceecCCCCCceEeeeCCCCCcEEEEeeccce
Q psy8010          36 SLYRSCSQPQNLVLTGEYPDCDVKLCDFGISR   67 (87)
Q Consensus        36 ~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~   67 (87)
                      ..+|.|+.|.|++.+.+    .++++||+.+.
T Consensus        78 ~p~H~D~~~~N~~~~~~----~~~lIDwe~a~  105 (188)
T PRK10271         78 APLHMDVHAGNLVHSAS----GLRLIDWEYAG  105 (188)
T ss_pred             eeecCCCCCccEEEECC----CEEEEeCCccc
Confidence            46899999999998763    48899998765

>TIGR02721 ycfN_thiK thiamine kinase

Probab=92.02  E-value=0.18  Score=30.73  Aligned_cols=29  Identities=24%  Similarity=0.266  Sum_probs=23.9

Q ss_pred             CCceecCCCCCceEeeeCCCCCcEEEEeeccce
Q psy8010          35 HSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISR   67 (87)
Q Consensus        35 ~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~   67 (87)
                      ..++|.|+.+.|++++.+    .+.+.||+.+.
T Consensus       146 ~~l~H~Dl~~~Nil~~~~----~~~lIDwE~a~  174 (256)
T TIGR02721       146 LAPLHMDVHAYNLVVTPQ----GLKLIDWEYAS  174 (256)
T ss_pred             CeeecCCCCcCcEEEeCC----CCEEEeccccC
Confidence            358999999999999874    37899998664

Members of this family are the ycfN gene product of Escherichia coli, now identified as the salvage enzyme thiamine kinase (thiK), and additional proteobacterial homologs taken to be orthologs with equivalent function.

>TIGR02172 Fb_sc_TIGR02172 Fibrobacter succinogenes paralogous family TIGR02172

Probab=91.87  E-value=0.19  Score=30.33  Aligned_cols=29  Identities=21%  Similarity=0.147  Sum_probs=24.0

Q ss_pred             CCceecCCCCCceEeeeCCCCCcEEEEeeccce
Q psy8010          35 HSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISR   67 (87)
Q Consensus        35 ~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~   67 (87)
                      ..++|.|+.|.|++++..   . +.++||+.+.
T Consensus       153 ~~~~HgD~~~~Nii~~~~---~-~~iIDwe~a~  181 (226)
T TIGR02172       153 STCLHGDFQIGNLITSGK---G-TYWIDLGDFG  181 (226)
T ss_pred             CceEecCCCCCcEEEcCC---C-cEEEechhcC
Confidence            356899999999999874   4 8899998764

This model describes a paralogous family of five proteins, likely to be enzymes, in the rumen bacterium Fibrobacter succinogenes S85. Members show homology to proteins described by PFAM model pfam01636, a phosphotransferase enzyme family associated with resistance to aminoglycoside antibiotics. However, members of this family score below the current trusted and noise cutoffs for pfam01636.

>PF01633 Choline_kinase: Choline/ethanolamine kinase; InterPro: IPR002573 Choline kinase, (ATP:choline phosphotransferase, 2

Probab=91.78  E-value=0.13  Score=30.36  Aligned_cols=31  Identities=26%  Similarity=0.385  Sum_probs=19.8

Q ss_pred             CCceecCCCCCceEe-eeCCCCCcEEEEeecccee
Q psy8010          35 HSLYRSCSQPQNLVL-TGEYPDCDVKLCDFGISRH   68 (87)
Q Consensus        35 ~~~~h~~~~~~~~l~-~~~~~~~~~kl~dfg~~~~   68 (87)
                      ..+.|.|+.+.|++. ..   ...++++||..|..
T Consensus       143 ~v~cHnDl~~~Nil~~~~---~~~~~lIDfEya~~  174 (211)
T PF01633_consen  143 LVFCHNDLNPGNILINNK---DGEVKLIDFEYAGY  174 (211)
T ss_dssp             EEEE-S--SGGGEEETSS---SSCEEE--GTT-EE
T ss_pred             ceEeeccCccccEEeccC---CCeEEEecHHHHhh
Confidence            457899999999999 44   37899999987653

7.1.32 from EC) belongs to the choline/ethanolamine kinase family. Ethanolamine and choline are major membrane phospholipids, in the form of glycerophosphoethanolamine and glycerophosphocholine. Ethanolamine is also a component of the glycosylphosphatidylinositol (GPI) anchor, which is necessary for cell-surface protein attachment []. The de novo synthesis of these phospholipids begins with the creation of phosphoethanolamine and phosphocholine by ethanolamine and choline kinases in the first step of the CDP-ethanolamine pathway [, ]. There are two putative choline/ethanolamine kinases (C/EKs) in the Trypanosoma brucei genome. Ethanolamine kinase has no choline kinase activity [] and its activity is inhibited by ADP []. Inositol supplementation represses ethanolamine kinase, decreasing the incorporation of ethanolamine into the CDP-ethanolamine pathway and into phosphatidylethanolamine and phosphatidylcholine []. ; GO: 0016773 phosphotransferase activity, alcohol group as acceptor; PDB: 3C5I_A 2IG7_A 3LQ3_A 3FEG_A 2QG7_E 3FI8_A 1NW1_A 3MES_A 3G15_A 2CKP_B ....

>smart00587 CHK ZnF_C4 abd HLH domain containing kinases domain

Probab=91.46  E-value=0.38  Score=28.32  Aligned_cols=35  Identities=23%  Similarity=0.205  Sum_probs=26.2

Q ss_pred             hCCceecCCCCCceEeeeCCC--CCcEEEEeecccee
Q psy8010          34 THSLYRSCSQPQNLVLTGEYP--DCDVKLCDFGISRH   68 (87)
Q Consensus        34 ~~~~~h~~~~~~~~l~~~~~~--~~~~kl~dfg~~~~   68 (87)
                      ...++|+|+.+.|+++..+++  ...+.+.||..+..
T Consensus       119 ~~vl~HgD~~~~N~~~~~~~~~~~~~~~liDfq~~~~  155 (196)
T smart00587      119 FNVLNHGDLWANNIMFKYDDEGKPEDVALIDFQLSHY  155 (196)
T ss_pred             ceEEeeCCCCccceeeccCCCCCccceEEEecccCCc
Confidence            356889999999999986421  12588999987653

subfamily of choline kinases

>PLN02421 phosphotransferase, alcohol group as acceptor/kinase

Probab=91.39  E-value=0.27  Score=31.35  Aligned_cols=30  Identities=17%  Similarity=0.233  Sum_probs=24.6

Q ss_pred             CceecCCCCCceEeeeCCCCCcEEEEeeccce
Q psy8010          36 SLYRSCSQPQNLVLTGEYPDCDVKLCDFGISR   67 (87)
Q Consensus        36 ~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~   67 (87)
                      .+.|.|+.+.|+++...  ...++++||..|.
T Consensus       183 v~CHnDl~~~NiL~~~~--~~~l~lID~EYag  212 (330)
T PLN02421        183 VFAHNDLLSGNLMLNED--EGKLYFIDFEYGS  212 (330)
T ss_pred             EEEECCCCcccEEEeCC--CCcEEEEcccccC
Confidence            37899999999999754  2579999998765

>KOG2137|consensus

Probab=91.16  E-value=0.16  Score=35.62  Aligned_cols=45  Identities=20%  Similarity=0.290  Sum_probs=36.8

Q ss_pred             HHHHHHHHHHHHhhh-CCceecCCCCCceEeeeCCCCCcEEEEeeccceec
Q psy8010          20 TVTLLGSLNHHFTST-HSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHL   69 (87)
Q Consensus        20 ~~q~~~~l~~~~~h~-~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~   69 (87)
                      +.++..|+  .++|. .+++|.++.|+++.++..   +..|+..|+.+...
T Consensus       105 l~~v~dgl--~flh~sAk~VH~ni~p~~i~~na~---~~wkl~Gf~f~v~~  150 (700)
T KOG2137|consen  105 LGNVADGL--AFLHRSAKVVHGNIQPEAIVVNAN---GDWKLAGFSFCVNA  150 (700)
T ss_pred             hhcccchh--hhhccCcceeecccchhheeeccC---cceeeccchhhhcc
Confidence            34455788  99995 689999999999999985   88999999876543

>KOG1266|consensus

Probab=90.99  E-value=0.86  Score=29.94  Aligned_cols=42  Identities=10%  Similarity=0.177  Sum_probs=33.6

Q ss_pred             HHHHHHHHHHHHHHHHHHhhhCC--ceecCCCCCceEeeeCCCCCcEEE
Q psy8010          14 RLVAKVTVTLLGSLNHHFTSTHS--LYRSCSQPQNLVLTGEYPDCDVKL   60 (87)
Q Consensus        14 ~~~~~~~~q~~~~l~~~~~h~~~--~~h~~~~~~~~l~~~~~~~~~~kl   60 (87)
                      +.-++++.|+++|+  .|+|+..  ++|.++.-..++...   ++.+|+
T Consensus       176 ~~wkkw~tqIlsal--~yLhs~~PpiihgnlTc~tifiq~---ngLIki  219 (458)
T KOG1266|consen  176 KAWKKWCTQILSAL--SYLHSCDPPIIHGNLTCDTIFIQH---NGLIKI  219 (458)
T ss_pred             HHHHHHHHHHHhhh--hhhhccCCccccCCcchhheeecC---CceEEe
Confidence            35688999999999  9999874  789998888888775   356665

>KOG1235|consensus

Probab=90.80  E-value=1.1  Score=30.81  Aligned_cols=41  Identities=17%  Similarity=0.293  Sum_probs=31.9

Q ss_pred             HHhhhCCceecCCCCCceEeeeCC-CCCcEEEEeeccceecC
Q psy8010          30 HFTSTHSLYRSCSQPQNLVLTGEY-PDCDVKLCDFGISRHLS   70 (87)
Q Consensus        30 ~~~h~~~~~h~~~~~~~~l~~~~~-~~~~~kl~dfg~~~~~~   70 (87)
                      ..+...|++|.|-.|.|+++.++. ....+.+.|+|+...+.
T Consensus       315 ~qIf~~GffHaDPHPGNilv~~~~~~~~~ivllDhGl~~~is  356 (538)
T KOG1235|consen  315 EQIFKTGFFHADPHPGNILVRPNPEGDEEIVLLDHGLYAVIS  356 (538)
T ss_pred             HHHHhcCCccCCCCCCcEEEecCCCCCccEEEEccccccccc
Confidence            345678899999999999999531 24678899999877543

>PF13095 FTA2: Kinetochore Sim4 complex subunit FTA2

Probab=90.73  E-value=0.49  Score=28.56  Aligned_cols=41  Identities=22%  Similarity=0.204  Sum_probs=31.7

Q ss_pred             HHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccc
Q psy8010          16 VAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGIS   66 (87)
Q Consensus        16 ~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~   66 (87)
                      ...-+.++..-+  ..+|..|++.+|+++.|..-        -+++|||.+
T Consensus       166 ~~~~~~~~~~dl--~~~~k~gI~~~Dv~~~ny~~--------G~lvDfs~~  206 (207)
T PF13095_consen  166 QIRDIPQMLRDL--KILHKLGIVPRDVKPRNYRG--------GKLVDFSSS  206 (207)
T ss_pred             chhHHHHHHHHH--HHHHHCCeeeccCccccccC--------CEEEecccC
Confidence            344466777778  89999999999999988772        258899854

>KOG2268|consensus

Probab=90.45  E-value=1  Score=29.78  Aligned_cols=41  Identities=17%  Similarity=0.253  Sum_probs=31.7

Q ss_pred             HHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeec
Q psy8010          19 VTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFG   64 (87)
Q Consensus        19 ~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg   64 (87)
                      +...+..-+  --+..+|++|.|+.--|+++..+   ..++++||-
T Consensus       207 ly~~lm~~I--v~la~~GlIHgDFNEFNimv~dd---~~i~vIDFP  247 (465)
T KOG2268|consen  207 LYDDLMGLI--VRLANHGLIHGDFNEFNIMVKDD---DKIVVIDFP  247 (465)
T ss_pred             HHHHHHHHH--HHHHHcCceecccchheeEEecC---CCEEEeech
Confidence            333343444  56788999999999999999974   779999994

>PF10707 YrbL-PhoP_reg: PhoP regulatory network protein YrbL; InterPro: IPR019647 This entry represents proteins that are activated by the protein PhoP

Probab=90.24  E-value=1.8  Score=25.83  Aligned_cols=35  Identities=20%  Similarity=0.319  Sum_probs=27.2

Q ss_pred             HHhhhCCceecCCCCCceEeeeCCCCC-cEEEEe-ec
Q psy8010          30 HFTSTHSLYRSCSQPQNLVLTGEYPDC-DVKLCD-FG   64 (87)
Q Consensus        30 ~~~h~~~~~h~~~~~~~~l~~~~~~~~-~~kl~d-fg   64 (87)
                      .++-...|+..|++|.||++...++.. .+.++| ||
T Consensus       132 ~~l~~~~Iv~~dl~~~NIv~~~~~~~~~~lvlIDG~G  168 (199)
T PF10707_consen  132 RYLLDHHIVIRDLNPHNIVVQRRDSGEFRLVLIDGLG  168 (199)
T ss_pred             HHHHHcCCeecCCCcccEEEEecCCCceEEEEEeCCC
Confidence            567889999999999999998875434 566666 44

PhoP controls the expression of a large number of genes that mediate adaptation to low Mg2+ environments and/or virulence in several bacterial species. YbrL is proposed to be acting in a loop activity with PhoP and PrmA analogous to the multi-component loop in Salmonella sp., where the PhoP-dependent PmrD protein activates the regulatory protein PmrA, and the activated PmrA then represses transcription from the PmrD promoter which harbours binding sites for both the PhoP and PmrA proteins. Expression of YrbL is induced in low Mg2+ in a PhoP-dependent fashion and repressed by Fe3+ in a PmrA-dependent manner [].

>COG2334 Putative homoserine kinase type II (protein kinase fold) [General function prediction only]

Probab=90.19  E-value=1  Score=29.01  Aligned_cols=28  Identities=14%  Similarity=0.278  Sum_probs=24.0

Q ss_pred             ceecCCCCCceEeeeCCCCC-cEEEEeeccce
Q psy8010          37 LYRSCSQPQNLVLTGEYPDC-DVKLCDFGISR   67 (87)
Q Consensus        37 ~~h~~~~~~~~l~~~~~~~~-~~kl~dfg~~~   67 (87)
                      ++|.|+.+.|+++...   . -..+.||+-++
T Consensus       199 iIH~D~~~~NVl~d~~---~~~~g~iDFdDa~  227 (331)
T COG2334         199 IIHGDLHPDNVLFDDD---TDVSGFIDFDDAG  227 (331)
T ss_pred             eeecCCCccceeEcCC---CCeeeEEEccccc
Confidence            9999999999999985   3 37889998665

>PRK06148 hypothetical protein; Provisional

Probab=89.85  E-value=1.2  Score=32.94  Aligned_cols=34  Identities=15%  Similarity=0.182  Sum_probs=25.4

Q ss_pred             hCCceecCCCCCceEeeeCCCCCcEEEEeeccce
Q psy8010          34 THSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISR   67 (87)
Q Consensus        34 ~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~   67 (87)
                      .++++|.|+.+.|++++.+++..-.-+.|||-+.
T Consensus       202 p~~vIHgDln~~NiLv~~~~~~~isGiIDFgDa~  235 (1013)
T PRK06148        202 PAQVIHNDANDYNILVDADDGERISGLIDFGDAV  235 (1013)
T ss_pred             CcceECCCCCcccEEEcCCCCcceEEEEECcccc
Confidence            4679999999999999875221234589998654

>PRK06149 hypothetical protein; Provisional

Probab=89.51  E-value=1.3  Score=32.43  Aligned_cols=34  Identities=15%  Similarity=-0.009  Sum_probs=25.4

Q ss_pred             hCCceecCCCCCceEeeeCCCC--CcEEEEeeccce
Q psy8010          34 THSLYRSCSQPQNLVLTGEYPD--CDVKLCDFGISR   67 (87)
Q Consensus        34 ~~~~~h~~~~~~~~l~~~~~~~--~~~kl~dfg~~~   67 (87)
                      ..+++|.|+.+.|+++..+++.  .-..+.|||-+.
T Consensus       207 ~~g~IH~Dl~~~Nilv~~~~~~~~~v~giIDFgD~~  242 (972)
T PRK06149        207 PLQAVHLDITDDNVVGSRDADGRWQPDGVIDFGDLV  242 (972)
T ss_pred             cccccCCCCCcccEEEcCCCCCCcceeEEEEcccch
Confidence            5789999999999999864211  124789998654

>PRK09550 mtnK methylthioribose kinase; Reviewed

Probab=89.12  E-value=0.45  Score=31.46  Aligned_cols=30  Identities=13%  Similarity=0.135  Sum_probs=25.3

Q ss_pred             hCCceecCCCCCceEeeeCCCCCcEEEEeeccce
Q psy8010          34 THSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISR   67 (87)
Q Consensus        34 ~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~   67 (87)
                      ...++|+|+.+.|+++..    ..++++|+.++.
T Consensus       222 ~~~l~HgDl~~gni~~~~----~~~~viD~E~a~  251 (401)
T PRK09550        222 AEALLHGDLHTGSIFVTE----EETKVIDPEFAF  251 (401)
T ss_pred             CCceeeccCCcccEEeeC----CCcEEEeccccc
Confidence            467999999999999987    368999998654

>PF12260 PIP49_C: Protein-kinase domain of FAM69; InterPro: IPR022049 Family with sequence similarity 69 has three members (A, B and C)

Probab=88.85  E-value=1.8  Score=25.53  Aligned_cols=48  Identities=23%  Similarity=0.249  Sum_probs=38.2

Q ss_pred             HHHHHHHHHHHHHHHHHHhhh---CCceecCCCCCceEeeeCCCCCcEEEEeeccc
Q psy8010          14 RLVAKVTVTLLGSLNHHFTST---HSLYRSCSQPQNLVLTGEYPDCDVKLCDFGIS   66 (87)
Q Consensus        14 ~~~~~~~~q~~~~l~~~~~h~---~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~   66 (87)
                      +...+++.+++..+  ..++.   ..+.-.|++++|+.++.+   ..+|+.|....
T Consensus        59 ~~R~~iA~~lL~~l--~~l~~~~~~~~~lcDv~~~nfgv~~~---~~lk~iDld~v  109 (188)
T PF12260_consen   59 EQRAKIALQLLELL--EELDHGPLGFFYLCDVSPDNFGVNDD---GRLKLIDLDDV  109 (188)
T ss_pred             HHHHHHHHHHHHHH--HHHhcCCCCcEEEeecchHHeEEeCC---CcEEEEechhc
Confidence            46678888888888  77765   347779999999999974   68999997643

Proteins in this uncharacterised family are described as transmembrane proteins.

>cd05152 MPH2' Macrolide 2'-Phosphotransferase (MPH2')

Probab=88.67  E-value=0.54  Score=29.30  Aligned_cols=32  Identities=13%  Similarity=0.193  Sum_probs=24.6

Q ss_pred             CCceecCCCCCceEeeeCCCCCcEEEEeecccee
Q psy8010          35 HSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRH   68 (87)
Q Consensus        35 ~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~   68 (87)
                      ..++|.|+.+.|++++.+  ..-..+.||+.+..
T Consensus       185 ~~lvHGD~~~~Nilv~~~--~~~~gviDWe~a~i  216 (276)
T cd05152         185 TVLVHGDLHPGHILIDED--ARVTGLIDWTEAKV  216 (276)
T ss_pred             CeeEeCCCCCCcEEEeCC--CCEEEEECcHhccc
Confidence            458999999999999863  13356899987653

MPH2' is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). MPH2' catalyzes the transfer of the gamma-phosphoryl group from ATP to the 2'-hydroxyl of macrolide antibiotics such as erythromycin, clarithromycin, and azithromycin, among others. Macrolides penetrate the bacterial cell and bind to ribosomes, where it interrupts protein elongation, leading ultimately to the demise of the bacterium. Phosphorylation of macrolides leads to their inactivation. Based on substrate specificity and amino acid sequence, MPH2' is divided into types I and II, encoded by mphA and mphB genes, respectively. MPH2'I inactivates 14-membered ring macrolides while MPH2'II inactivates both 14- and 16-membered ring macrolides. Enzymatic inactivation of macrolides has been reported

>COG3173 Predicted aminoglycoside phosphotransferase [General function prediction only]

Probab=88.09  E-value=0.69  Score=29.74  Aligned_cols=31  Identities=16%  Similarity=0.256  Sum_probs=25.8

Q ss_pred             hCCceecCCCCCceEeeeCCCCCcEEEEeeccce
Q psy8010          34 THSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISR   67 (87)
Q Consensus        34 ~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~   67 (87)
                      .-.++|.|+.+.|+++...   ..+-+.||+.+.
T Consensus       197 ~~~lvHGD~~~gNlii~~~---~~~gVlDwe~~~  227 (321)
T COG3173         197 PPVLVHGDYRPGNLIIDPG---RPTGVLDWELAT  227 (321)
T ss_pred             CceeeeCCcccCCEEEeCC---CeeEEEeccccc
Confidence            3468999999999999986   458899998764

>PHA03111 Ser/Thr kinase; Provisional

Probab=87.72  E-value=2.2  Score=28.25  Aligned_cols=20  Identities=10%  Similarity=0.228  Sum_probs=17.1

Q ss_pred             hCCceecCCCCCceEeeeCC
Q psy8010          34 THSLYRSCSQPQNLVLTGEY   53 (87)
Q Consensus        34 ~~~~~h~~~~~~~~l~~~~~   53 (87)
                      +...+|.|+||.|+++-..+
T Consensus       301 c~nF~H~DLKPdNILiFds~  320 (444)
T PHA03111        301 CDNFLHVDLKPDNILIFDSD  320 (444)
T ss_pred             cceeeeccCCCCcEEEecCC
Confidence            46799999999999988763

>TIGR01767 MTRK 5-methylthioribose kinase

Probab=87.31  E-value=2.1  Score=28.15  Aligned_cols=31  Identities=13%  Similarity=0.188  Sum_probs=25.1

Q ss_pred             hhCCceecCCCCCceEeeeCCCCCcEEEEeeccce
Q psy8010          33 STHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISR   67 (87)
Q Consensus        33 h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~   67 (87)
                      ....++|.|+.+.|++++..    ..++.|+.++.
T Consensus       190 ~~~~llHGDl~~gNi~~~~~----~~~~iD~e~~~  220 (370)
T TIGR01767       190 SAETLLHGDLHSGSIFVSEH----ETKVIDPEFAF  220 (370)
T ss_pred             CcceeeeccCCcccEEEcCC----CCEEEcCcccc
Confidence            45679999999999999773    47799987654

This enzyme is involved in the methionine salvage pathway in certain bacteria.

>PF02958 EcKinase: Ecdysteroid kinase; InterPro: IPR004119 This family includes proteins of unknown function

Probab=87.24  E-value=0.43  Score=29.57  Aligned_cols=34  Identities=24%  Similarity=0.267  Sum_probs=26.2

Q ss_pred             CCceecCCCCCceEeeeCCC--CCcEEEEeecccee
Q psy8010          35 HSLYRSCSQPQNLVLTGEYP--DCDVKLCDFGISRH   68 (87)
Q Consensus        35 ~~~~h~~~~~~~~l~~~~~~--~~~~kl~dfg~~~~   68 (87)
                      .-++|.|+...|+++..+++  ...+.+.||.+++.
T Consensus       215 ~vl~HGD~w~nNilf~~~~~g~~~~~~liDfQ~~~~  250 (294)
T PF02958_consen  215 NVLCHGDFWTNNILFKYDDDGKPIDVVLIDFQLARY  250 (294)
T ss_pred             eEEEcCccCHHhEeEccccccccccceeeccccccC
Confidence            34889999999999987532  13689999987764

All known members of this group are proteins from drosophila and Caenorhabditis elegans.

>TIGR02904 spore_ysxE spore coat protein YsxE

Probab=86.61  E-value=3.3  Score=26.07  Aligned_cols=30  Identities=7%  Similarity=0.008  Sum_probs=24.8

Q ss_pred             CCceecCCCCCceEeeeCCCCCcEEEEeeccce
Q psy8010          35 HSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISR   67 (87)
Q Consensus        35 ~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~   67 (87)
                      .+++|.|+.+.|+++..+   ..+.+.||..+.
T Consensus       196 ~~lcHgD~~~~Nvl~~~~---~~~~iIDfd~~~  225 (309)
T TIGR02904       196 TVLVHGKLSLSHFLYDET---RGGYFINFEKAS  225 (309)
T ss_pred             eeeeCCCCcHHhEEEcCC---CCEEEEEhhhcc
Confidence            479999999999999874   568889987554

Members of this family are homologs of the Bacillus subtilis spore coat protein CotS. Members of this family, designated YsxE, are found only in the family Bacillaceae, from among the endospore-forming members of the Firmicutes branch of the Bacteria. As a rule, the ysxE gene is found immediately downstream of spoVID, a gene necessary for spore coat assembly. The protein has been shown to be part of the spore coat.

>PF05445 Pox_ser-thr_kin: Poxvirus serine/threonine protein kinase; InterPro: IPR008790 This family of proteins contain poxvirus serine/threonine protein kinases, which are essential for phosphorylation of virion proteins during virion assembly

Probab=85.98  E-value=2.2  Score=28.27  Aligned_cols=20  Identities=10%  Similarity=0.228  Sum_probs=17.0

Q ss_pred             hCCceecCCCCCceEeeeCC
Q psy8010          34 THSLYRSCSQPQNLVLTGEY   53 (87)
Q Consensus        34 ~~~~~h~~~~~~~~l~~~~~   53 (87)
                      +...+|.|+||.|+++-...
T Consensus       297 c~nF~H~DLKPdNILiFds~  316 (434)
T PF05445_consen  297 CTNFLHVDLKPDNILIFDSK  316 (434)
T ss_pred             cceeeecccCcCcEEEecCC
Confidence            46799999999999988763

; GO: 0004672 protein kinase activity, 0005524 ATP binding

>PRK11768 serine/threonine protein kinase; Provisional

Probab=84.15  E-value=3.4  Score=26.33  Aligned_cols=29  Identities=14%  Similarity=0.193  Sum_probs=23.1

Q ss_pred             hCCceecCCCCCceEeeeCCCCCcEEEEeeccce
Q psy8010          34 THSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISR   67 (87)
Q Consensus        34 ~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~   67 (87)
                      ..+++|.|+.+.|+++..     ...+.||+-+.
T Consensus       195 ~~~liHgD~h~~NvL~~d-----~~~iIDFDd~~  223 (325)
T PRK11768        195 RLLRLHGDCHPGNILWRD-----GPHFVDLDDAR  223 (325)
T ss_pred             CccceecCCCchhccccC-----CcEEEeCCCCC
Confidence            457899999999999942     36789998654

>PRK12396 5-methylribose kinase; Reviewed

Probab=83.44  E-value=3.8  Score=27.36  Aligned_cols=30  Identities=10%  Similarity=0.085  Sum_probs=24.5

Q ss_pred             hCCceecCCCCCceEeeeCCCCCcEEEEeeccce
Q psy8010          34 THSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISR   67 (87)
Q Consensus        34 ~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~   67 (87)
                      ...++|.|+.+.+|+++.    ...|+.|-.++.
T Consensus       226 ~~aLlHGDlHtGSI~v~~----~~~kvIDpEFAf  255 (409)
T PRK12396        226 AQALIHGDLHTGSVFVKN----DSTKVIDPEFAF  255 (409)
T ss_pred             chhhccCcCCCCCEEecC----CceEEEcccccc
Confidence            467999999999999998    368898866553

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	87
3lm0_A	327	Crystal Structure Of Human SerineTHREONINE KINASE 1		5e-08
3igo_A	486	Crystal Structure Of Cryptosporidium Parvum Cdpk1,		1e-04
2wei_A	287	Crystal Structure Of The Kinase Domain Of Cryptospo		1e-04
3dfa_A	286	Crystal Structure Of Kinase Domain Of Calcium-depen		1e-04
2ycr_A	323	Crystal Structure Of Checkpoint Kinase 2 In Complex		4e-04
2ycf_A	322	Crystal Structure Of Checkpoint Kinase 2 In Complex		4e-04
2xk9_A	322	Structural Analysis Of Checkpoint Kinase 2 (Chk2) I		4e-04
3i6w_A	443	Structure And Activation Mechanism Of The Chk2 Dna-		4e-04
3i6u_A	419	Structure And Activation Mechanism Of The Chk2 Dna-		4e-04
2w0j_A	323	Crystal Structure Of Chk2 In Complex With Nsc 10955		4e-04
2cn5_A	329	Crystal Structure Of Human Chk2 In Complex With Adp		4e-04

>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B (STK17B) Length = 327

Iteration: 1
 Score = 52.8 bits (125), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 20/44 (45%), Positives = 33/44 (75%)
Query: 43  QPQNLVLTGEYPDCDVKLCDFGISRHLSRDVDVREILGTPDYVG 86
           +PQN++L+  YP  D+K+ DFG+SR +    ++REI+GTP+Y+ 
Sbjct: 158 KPQNILLSSIYPLGDIKIVDFGMSRKIGHACELREIMGTPEYLA 201

>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1, Cgd3_920 Length = 486

Iteration: 1
 Score = 41.2 bits (95), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 15/56 (26%), Positives = 33/56 (58%)
Query: 31  FTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDVDVREILGTPDYVG 86
           +   H++     +P+N++L  +  DCD+K+ DFG+S    ++  +++ +GT  Y+ 
Sbjct: 136 YMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYYIA 191

>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium Parvum Calcium Dependent Protein Kinase In Complex With 3- Mb-Pp1 Length = 287

Iteration: 1
 Score = 41.2 bits (95), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 15/56 (26%), Positives = 33/56 (58%)
Query: 31  FTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDVDVREILGTPDYVG 86
           +   H++     +P+N++L  +  DCD+K+ DFG+S    ++  +++ +GT  Y+ 
Sbjct: 136 YMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYYIA 191

>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent Protein Kinase Cgd3_920 From Cryptosporidium Parvum Length = 286

Iteration: 1
 Score = 41.2 bits (95), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 15/56 (26%), Positives = 33/56 (58%)
Query: 31  FTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDVDVREILGTPDYVG 86
           +   H++     +P+N++L  +  DCD+K+ DFG+S    ++  +++ +GT  Y+ 
Sbjct: 136 YMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYYIA 191

>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With Inhibitor Pv976 Length = 323

Iteration: 1
 Score = 39.7 bits (91), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 16/44 (36%), Positives = 28/44 (63%)
Query: 43  QPQNLVLTGEYPDCDVKLCDFGISRHLSRDVDVREILGTPDYVG 86
           +P+N++L+ +  DC +K+ DFG S+ L     +R + GTP Y+ 
Sbjct: 141 KPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLA 184

>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With Inhibitor Pv1531 Length = 322

Iteration: 1
 Score = 39.7 bits (91), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 16/44 (36%), Positives = 28/44 (63%)
Query: 43  QPQNLVLTGEYPDCDVKLCDFGISRHLSRDVDVREILGTPDYVG 86
           +P+N++L+ +  DC +K+ DFG S+ L     +R + GTP Y+ 
Sbjct: 141 KPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLA 184

>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In Complex With Inhibitor Pv1533 Length = 322

Iteration: 1
 Score = 39.7 bits (91), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 16/44 (36%), Positives = 28/44 (63%)
Query: 43  QPQNLVLTGEYPDCDVKLCDFGISRHLSRDVDVREILGTPDYVG 86
           +P+N++L+ +  DC +K+ DFG S+ L     +R + GTP Y+ 
Sbjct: 140 KPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLA 183

>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage Checkpoint Kinase Length = 443

Iteration: 1
 Score = 39.7 bits (91), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 16/44 (36%), Positives = 28/44 (63%)
Query: 43  QPQNLVLTGEYPDCDVKLCDFGISRHLSRDVDVREILGTPDYVG 86
           +P+N++L+ +  DC +K+ DFG S+ L     +R + GTP Y+ 
Sbjct: 280 KPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLA 323

>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage Checkpoint Kinase Length = 419

Iteration: 1
 Score = 39.7 bits (91), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 16/44 (36%), Positives = 28/44 (63%)
Query: 43  QPQNLVLTGEYPDCDVKLCDFGISRHLSRDVDVREILGTPDYVG 86
           +P+N++L+ +  DC +K+ DFG S+ L     +R + GTP Y+ 
Sbjct: 266 KPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLA 309

>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A Specific Inhibitor Length = 323

Iteration: 1
 Score = 39.7 bits (91), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 16/44 (36%), Positives = 28/44 (63%)
Query: 43  QPQNLVLTGEYPDCDVKLCDFGISRHLSRDVDVREILGTPDYVG 86
           +P+N++L+ +  DC +K+ DFG S+ L     +R + GTP Y+ 
Sbjct: 141 KPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLA 184

>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp Length = 329

Iteration: 1
 Score = 39.7 bits (91), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 16/44 (36%), Positives = 28/44 (63%)
Query: 43  QPQNLVLTGEYPDCDVKLCDFGISRHLSRDVDVREILGTPDYVG 86
           +P+N++L+ +  DC +K+ DFG S+ L     +R + GTP Y+ 
Sbjct: 147 KPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLA 190

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	87
3lm5_A	327	Serine/threonine-protein kinase 17B; STK17B, serin	3e-11
3bhy_A	283	Death-associated protein kinase 3; death associate	4e-09
2y0a_A	326	Death-associated protein kinase 1; transferase, ca	5e-09
2yab_A	361	Death-associated protein kinase 2; apoptosis, tran	8e-09
3q5i_A	504	Protein kinase; CDPK, malaria, phosphotransferase,	9e-09
3mwu_A	486	Calmodulin-domain protein kinase 1; serine/threoni	9e-09
2a2a_A	321	Death-associated protein kinase 2; autoinhibition,	1e-08
3nyv_A	484	Calmodulin-domain protein kinase 1; serine/threoni	2e-08
3lij_A	494	Calcium/calmodulin dependent protein kinase with A	3e-08
1nxk_A	400	MAP kinase-activated protein kinase 2; MK2, phosph	3e-08
2w4o_A	349	Calcium/calmodulin-dependent protein kinase type I	4e-08
2x4f_A	373	Myosin light chain kinase family member 4; LUNG, b	1e-07
2a19_B	284	Interferon-induced, double-stranded RNA-activated	1e-07
1tki_A	321	Titin; serine kinase, muscle, autoinhibition; 2.00	1e-07
1kob_A	387	Twitchin; kinase, intrasteric regulation; 2.30A {A	1e-07
3f3z_A	277	Calcium/calmodulin-dependent protein kinase with d	2e-07
2wei_A	287	Calmodulin-domain protein kinase 1, putative; nucl	2e-07
2bdw_A	362	Hypothetical protein K11E8.1D; kinase, calmodulin	2e-07
3kk8_A	284	Calcium/calmodulin dependent protein kinase II; AT	2e-07
2ycf_A	322	Serine/threonine-protein kinase CHK2; transferase,	3e-07
3is5_A	285	Calcium-dependent protein kinase; CDPK, structural	3e-07
3c0i_A	351	Peripheral plasma membrane protein CASK; neurexin,	3e-07
3uto_A	573	Twitchin; kinase, muscle sarcomere, transferase; H	4e-07
3qa8_A	676	MGC80376 protein; kinase ubiquitin-like domain, ph	4e-07
3fhr_A	336	MAP kinase-activated protein kinase 3; kinase-inhi	5e-07
4euu_A	319	Serine/threonine-protein kinase TBK1; ATP binding,	5e-07
3kn6_A	325	Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1	8e-07
2w5a_A	279	Serine/threonine-protein kinase NEK2; Ser/Thr prot	8e-07
3soa_A	444	Calcium/calmodulin-dependent protein kinase type a	9e-07
4apc_A	350	Serine/threonine-protein kinase NEK1; transferase;	1e-06
4eut_A	396	Serine/threonine-protein kinase TBK1; ATP binding,	1e-06
3i6u_A	419	CDS1, serine/threonine-protein kinase CHK2; Ser/Th	1e-06
2jam_A	304	Calcium/calmodulin-dependent protein kinase type 1	1e-06
3p1a_A	311	MYT1 kinase, membrane-associated tyrosine- and thr	2e-06
2dyl_A	318	Dual specificity mitogen-activated protein kinase	2e-06
2wqm_A	310	Serine/threonine-protein kinase NEK7; ATP-binding,	3e-06
3dbq_A	343	Dual specificity protein kinase TTK; MPS1 structur	5e-06
3cek_A	313	Dual specificity protein kinase TTK; HMPS1, PYT, E	6e-06
1phk_A	298	Phosphorylase kinase; glycogen metabolism, transfe	7e-06
2y7j_A	365	Phosphorylase B kinase gamma catalytic chain, test	9e-06
2i6l_A	320	Mitogen-activated protein kinase 6; MAPK6, ERK3, e	9e-06
2zmd_A	390	Dual specificity protein kinase TTK; MPS1, T686A,	1e-05
3aln_A	327	Dual specificity mitogen-activated protein kinase;	1e-05
3qyz_A	364	Mitogen-activated protein kinase 1; transferase, s	1e-05
3an0_A	340	Dual specificity mitogen-activated protein kinase;	2e-05
2ac3_A	316	MAP kinase-interacting serine/threonine kinase 2;	3e-05
2qr7_A	342	Ribosomal protein S6 kinase alpha-3; kinase domain	3e-05
3eqc_A	360	Dual specificity mitogen-activated protein kinase;	4e-05
3hko_A	345	Calcium/calmodulin-dependent protein kinase with d	5e-05
3rp9_A	458	Mitogen-activated protein kinase; structural genom	5e-05
3n9x_A	432	Phosphotransferase; malaria kinase, structural gen	8e-05
3fme_A	290	Dual specificity mitogen-activated protein kinase;	9e-05
2pzi_A	681	Probable serine/threonine-protein kinase PKNG; ATP	9e-05
2b9h_A	353	MAP kinase FUS3, mitogen-activated protein kinase	1e-04
3pg1_A	362	Mitogen-activated protein kinase, putative (MAP K	1e-04
3cok_A	278	Serine/threonine-protein kinase PLK4; POLO-like ki	1e-04
3e3p_A	360	Protein kinase, putative glycogen synthase kinase;	1e-04
3dzo_A	413	Rhoptry kinase domain; parasitic disease, transfer	1e-04
3eb0_A	383	Putative uncharacterized protein; kinase cryptospo	2e-04
3ttj_A	464	Mitogen-activated protein kinase 10; JNK3, protein	2e-04
2fst_X	367	Mitogen-activated protein kinase 14; active mutant	3e-04
4g31_A	299	Eukaryotic translation initiation factor 2-alpha;	3e-04
1cm8_A	367	Phosphorylated MAP kinase P38-gamma; phosphorylati	3e-04
3coi_A	353	Mitogen-activated protein kinase 13; P38D, P38delt	4e-04
1j1b_A	420	Glycogen synthase kinase-3 beta; complex, TAU, AMP	4e-04
3q60_A	371	ROP5B; pseudokinase, transferase; HET: ATP; 1.72A	5e-04
3oz6_A	388	Mitogen-activated protein kinase 1, serine/threon	5e-04
2xrw_A	371	Mitogen-activated protein kinase 8; transcription,	5e-04
1zy4_A	303	Serine/threonine-protein kinase GCN2; translation	6e-04
2x7f_A	326	TRAF2 and NCK-interacting protein kinase; serine/t	6e-04
3uc3_A	361	Serine/threonine-protein kinase SRK2I; SNRK2, ABA	8e-04

>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A* Length = 327

 Score = 56.5 bits (137), Expect = 3e-11
 Identities = 20/42 (47%), Positives = 32/42 (76%)

Query: 44  PQNLVLTGEYPDCDVKLCDFGISRHLSRDVDVREILGTPDYV 85
           PQN++L+  YP  D+K+ DFG+SR +    ++REI+GTP+Y+
Sbjct: 159 PQNILLSSIYPLGDIKIVDFGMSRKIGHACELREIMGTPEYL 200

>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ... Length = 283

 Score = 50.3 bits (121), Expect = 4e-09
 Identities = 15/43 (34%), Positives = 26/43 (60%), Gaps = 1/43 (2%)

Query: 44  PQNLVL-TGEYPDCDVKLCDFGISRHLSRDVDVREILGTPDYV 85
           P+N++L     P+  +KL DFGI+  +    + + I GTP++V
Sbjct: 136 PENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIFGTPEFV 178

>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens} Length = 326

 Score = 49.9 bits (120), Expect = 5e-09
 Identities = 13/43 (30%), Positives = 25/43 (58%), Gaps = 1/43 (2%)

Query: 44  PQN-LVLTGEYPDCDVKLCDFGISRHLSRDVDVREILGTPDYV 85
           P+N ++L    P   +K+ DFG++  +    + + I GTP++V
Sbjct: 142 PENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFV 184

>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A* Length = 361

 Score = 49.7 bits (119), Expect = 8e-09
 Identities = 15/43 (34%), Positives = 26/43 (60%), Gaps = 1/43 (2%)

Query: 44  PQN-LVLTGEYPDCDVKLCDFGISRHLSRDVDVREILGTPDYV 85
           P+N ++L    P   +KL DFG++  +   V+ + I GTP++V
Sbjct: 143 PENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFV 185

>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei} Length = 504

 Score = 49.3 bits (118), Expect = 9e-09
 Identities = 15/42 (35%), Positives = 27/42 (64%)

Query: 44  PQNLVLTGEYPDCDVKLCDFGISRHLSRDVDVREILGTPDYV 85
           P+N++L  +    ++K+ DFG+S   S+D  +R+ LGT  Y+
Sbjct: 174 PENILLENKNSLLNIKIVDFGLSSFFSKDYKLRDRLGTAYYI 215

>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A* Length = 486

 Score = 49.3 bits (118), Expect = 9e-09
 Identities = 14/42 (33%), Positives = 28/42 (66%)

Query: 44  PQNLVLTGEYPDCDVKLCDFGISRHLSRDVDVREILGTPDYV 85
           P+N++L  +  DCD+K+ DFG+S    ++  +++ +GT  Y+
Sbjct: 149 PENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYYI 190

>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A Length = 321

 Score = 49.2 bits (118), Expect = 1e-08
 Identities = 15/43 (34%), Positives = 26/43 (60%), Gaps = 1/43 (2%)

Query: 44  PQN-LVLTGEYPDCDVKLCDFGISRHLSRDVDVREILGTPDYV 85
           P+N ++L    P   +KL DFG++  +   V+ + I GTP++V
Sbjct: 143 PENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFV 185

>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A* Length = 484

 Score = 48.2 bits (115), Expect = 2e-08
 Identities = 13/42 (30%), Positives = 26/42 (61%)

Query: 44  PQNLVLTGEYPDCDVKLCDFGISRHLSRDVDVREILGTPDYV 85
           P+NL+L  +  D ++++ DFG+S H      +++ +GT  Y+
Sbjct: 154 PENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYI 195

>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A* Length = 494

 Score = 47.8 bits (114), Expect = 3e-08
 Identities = 15/42 (35%), Positives = 24/42 (57%)

Query: 44  PQNLVLTGEYPDCDVKLCDFGISRHLSRDVDVREILGTPDYV 85
           P+NL+L  +  D  +K+ DFG+S        ++E LGT  Y+
Sbjct: 164 PENLLLESKEKDALIKIVDFGLSAVFENQKKMKERLGTAYYI 205

>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C Length = 400

 Score = 47.8 bits (114), Expect = 3e-08
 Identities = 14/42 (33%), Positives = 23/42 (54%)

Query: 44  PQNLVLTGEYPDCDVKLCDFGISRHLSRDVDVREILGTPDYV 85
           P+NL+ T + P+  +KL DFG ++  +    +     TP YV
Sbjct: 189 PENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYV 230

>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens} Length = 349

 Score = 47.3 bits (113), Expect = 4e-08
 Identities = 15/42 (35%), Positives = 25/42 (59%)

Query: 44  PQNLVLTGEYPDCDVKLCDFGISRHLSRDVDVREILGTPDYV 85
           P+NL+     PD  +K+ DFG+S+ +   V ++ + GTP Y 
Sbjct: 176 PENLLYATPAPDAPLKIADFGLSKIVEHQVLMKTVCGTPGYC 217

>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens} Length = 373

 Score = 46.2 bits (110), Expect = 1e-07
 Identities = 10/42 (23%), Positives = 22/42 (52%), Gaps = 1/42 (2%)

Query: 44  PQNLVLTGEYPDCDVKLCDFGISRHLSRDVDVREILGTPDYV 85
           P+N++         +K+ DFG++R       ++   GTP+++
Sbjct: 215 PENILCVNR-DAKQIKIIDFGLARRYKPREKLKVNFGTPEFL 255

>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B* Length = 284

 Score = 46.1 bits (110), Expect = 1e-07
 Identities = 13/41 (31%), Positives = 16/41 (39%), Gaps = 3/41 (7%)

Query: 44  PQNLVLTGEYPDCDVKLCDFGISRHLSRDVDVREILGTPDY 84
           P N+ L        VK+ DFG+   L  D       GT  Y
Sbjct: 150 PSNIFLVD---TKQVKIGDFGLVTSLKNDGKRTRSKGTLRY 187

>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7 Length = 321

 Score = 46.1 bits (110), Expect = 1e-07
 Identities = 10/42 (23%), Positives = 20/42 (47%), Gaps = 1/42 (2%)

Query: 44  PQNLVLTGEYPDCDVKLCDFGISRHLSRDVDVREILGTPDYV 85
           P+N++         +K+ +FG +R L    + R +   P+Y 
Sbjct: 130 PENIIYQTR-RSSTIKIIEFGQARQLKPGDNFRLLFTAPEYY 170

>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7 Length = 387

 Score = 45.9 bits (109), Expect = 1e-07
 Identities = 11/42 (26%), Positives = 22/42 (52%), Gaps = 1/42 (2%)

Query: 44  PQNLVLTGEYPDCDVKLCDFGISRHLSRDVDVREILGTPDYV 85
           P+N++   +     VK+ DFG++  L+ D  V+    T ++ 
Sbjct: 177 PENIMCETK-KASSVKIIDFGLATKLNPDEIVKVTTATAEFA 217

>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A* Length = 277

 Score = 45.7 bits (109), Expect = 2e-07
 Identities = 15/42 (35%), Positives = 23/42 (54%)

Query: 44  PQNLVLTGEYPDCDVKLCDFGISRHLSRDVDVREILGTPDYV 85
           P+N +   + PD  +KL DFG++        +R  +GTP YV
Sbjct: 134 PENFLFLTDSPDSPLKLIDFGLAARFKPGKMMRTKVGTPYYV 175

>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A* Length = 287

 Score = 45.3 bits (108), Expect = 2e-07
 Identities = 14/42 (33%), Positives = 28/42 (66%)

Query: 44  PQNLVLTGEYPDCDVKLCDFGISRHLSRDVDVREILGTPDYV 85
           P+N++L  +  DCD+K+ DFG+S    ++  +++ +GT  Y+
Sbjct: 149 PENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYYI 190

>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B Length = 362

 Score = 45.4 bits (108), Expect = 2e-07
 Identities = 14/42 (33%), Positives = 22/42 (52%)

Query: 44  PQNLVLTGEYPDCDVKLCDFGISRHLSRDVDVREILGTPDYV 85
           P+NL+L  +     VKL DFG++  ++         GTP Y+
Sbjct: 156 PENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYL 197

>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A* Length = 284

 Score = 45.2 bits (108), Expect = 2e-07
 Identities = 14/42 (33%), Positives = 22/42 (52%)

Query: 44  PQNLVLTGEYPDCDVKLCDFGISRHLSRDVDVREILGTPDYV 85
           P+NL+L  +     VKL DFG++  ++         GTP Y+
Sbjct: 133 PENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYL 174

>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A* Length = 322

 Score = 45.4 bits (108), Expect = 3e-07
 Identities = 16/42 (38%), Positives = 27/42 (64%)

Query: 44  PQNLVLTGEYPDCDVKLCDFGISRHLSRDVDVREILGTPDYV 85
           P+N++L+ +  DC +K+ DFG S+ L     +R + GTP Y+
Sbjct: 142 PENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYL 183

>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii} Length = 285

 Score = 45.3 bits (108), Expect = 3e-07
 Identities = 11/42 (26%), Positives = 19/42 (45%)

Query: 44  PQNLVLTGEYPDCDVKLCDFGISRHLSRDVDVREILGTPDYV 85
           P+N++     P   +K+ DFG++     D       GT  Y+
Sbjct: 152 PENILFQDTSPHSPIKIIDFGLAELFKSDEHSTNAAGTALYM 193

>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A Length = 351

 Score = 45.0 bits (107), Expect = 3e-07
 Identities = 12/43 (27%), Positives = 20/43 (46%), Gaps = 1/43 (2%)

Query: 44  PQNLVLTGEYPDCDVKLCDFGISRHLSRDVDV-REILGTPDYV 85
           P  ++L  +     VKL  FG++  L     V    +GTP ++
Sbjct: 158 PHCVLLASKENSAPVKLGGFGVAIQLGESGLVAGGRVGTPHFM 200

>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A Length = 573

 Score = 44.8 bits (106), Expect = 4e-07
 Identities = 13/42 (30%), Positives = 25/42 (59%), Gaps = 1/42 (2%)

Query: 44  PQNLVLTGEYPDCDVKLCDFGISRHLSRDVDVREILGTPDYV 85
           P+N++ T +  + ++KL DFG++ HL     V+   GT ++ 
Sbjct: 283 PENIMFTTKRSN-ELKLIDFGLTAHLDPKQSVKVTTGTAEFA 323

>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A* Length = 676

 Score = 45.1 bits (106), Expect = 4e-07
 Identities = 12/42 (28%), Positives = 20/42 (47%)

Query: 44  PQNLVLTGEYPDCDVKLCDFGISRHLSRDVDVREILGTPDYV 85
           P+N+VL         K+ D G ++ L +     E +GT  Y+
Sbjct: 149 PENIVLQPGPQRLIHKIIDLGYAKELDQGELCTEFVGTLQYL 190

>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A* Length = 336

 Score = 44.6 bits (106), Expect = 5e-07
 Identities = 14/42 (33%), Positives = 25/42 (59%), Gaps = 1/42 (2%)

Query: 44  PQNLVLTGEYPDCDVKLCDFGISRHLSRDVDVREILGTPDYV 85
           P+NL+ T +  D  +KL DFG ++  +++  ++    TP YV
Sbjct: 156 PENLLYTSKEKDAVLKLTDFGFAKETTQNA-LQTPCYTPYYV 196

>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens} Length = 319

 Score = 44.4 bits (105), Expect = 5e-07
 Identities = 15/43 (34%), Positives = 21/43 (48%), Gaps = 1/43 (2%)

Query: 44  PQNLVL-TGEYPDCDVKLCDFGISRHLSRDVDVREILGTPDYV 85
           P N++   GE      KL DFG +R L  D     + GT +Y+
Sbjct: 140 PGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFVSLYGTEEYL 182

>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A Length = 325

 Score = 43.8 bits (104), Expect = 8e-07
 Identities = 13/43 (30%), Positives = 21/43 (48%), Gaps = 1/43 (2%)

Query: 44  PQNLVLTGEYPDCDVKLCDFGISRHLSRDVDV-REILGTPDYV 85
           P+NL+ T E  + ++K+ DFG +R    D    +    T  Y 
Sbjct: 134 PENLLFTDENDNLEIKIIDFGFARLKPPDNQPLKTPCFTLHYA 176

>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A* Length = 279

 Score = 43.8 bits (104), Expect = 8e-07
 Identities = 17/42 (40%), Positives = 24/42 (57%), Gaps = 4/42 (9%)

Query: 44  PQNLVLTGEYPDCDVKLCDFGISRHLSRDVDVRE-ILGTPDY 84
           P N+ L G     +VKL DFG++R L+ D    +  +GTP Y
Sbjct: 144 PANVFLDG---KQNVKLGDFGLARILNHDTSFAKTFVGTPYY 182

>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens} Length = 444

 Score = 43.8 bits (104), Expect = 9e-07
 Identities = 14/43 (32%), Positives = 22/43 (51%), Gaps = 1/43 (2%)

Query: 44  PQNLVLTGEYPDCDVKLCDFGISRHLSRDVDV-REILGTPDYV 85
           P+NL+L  +     VKL DFG++  +  +        GTP Y+
Sbjct: 138 PENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFGFAGTPGYL 180

>4apc_A Serine/threonine-protein kinase NEK1; transferase; 2.10A {Homo sapiens} Length = 350

 Score = 43.5 bits (103), Expect = 1e-06
 Identities = 18/42 (42%), Positives = 25/42 (59%), Gaps = 4/42 (9%)

Query: 44  PQNLVLTGEYPDCDVKLCDFGISRHLSRDVDVRE-ILGTPDY 84
            QN+ LT    D  V+L DFGI+R L+  V++    +GTP Y
Sbjct: 153 SQNIFLTK---DGTVQLGDFGIARVLNSTVELARACIGTPYY 191

>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens} Length = 396

 Score = 43.3 bits (102), Expect = 1e-06
 Identities = 15/43 (34%), Positives = 21/43 (48%), Gaps = 1/43 (2%)

Query: 44  PQNLVL-TGEYPDCDVKLCDFGISRHLSRDVDVREILGTPDYV 85
           P N++   GE      KL DFG +R L  D     + GT +Y+
Sbjct: 140 PGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFVSLYGTEEYL 182

>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A Length = 419

 Score = 43.1 bits (102), Expect = 1e-06
 Identities = 16/42 (38%), Positives = 27/42 (64%)

Query: 44  PQNLVLTGEYPDCDVKLCDFGISRHLSRDVDVREILGTPDYV 85
           P+N++L+ +  DC +K+ DFG S+ L     +R + GTP Y+
Sbjct: 267 PENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYL 308

>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A Length = 304

 Score = 42.9 bits (102), Expect = 1e-06
 Identities = 12/42 (28%), Positives = 21/42 (50%), Gaps = 1/42 (2%)

Query: 44  PQNLVLTGEYPDCDVKLCDFGISRHLSRDVDVREILGTPDYV 85
           P+NL+      +  + + DFG+S+     + +    GTP YV
Sbjct: 134 PENLLYLTPEENSKIMITDFGLSKMEQNGI-MSTACGTPGYV 174

>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens} Length = 311

 Score = 42.7 bits (101), Expect = 2e-06
 Identities = 13/41 (31%), Positives = 15/41 (36%), Gaps = 3/41 (7%)

Query: 44  PQNLVLTGEYPDCDVKLCDFGISRHLSRDVDVREILGTPDY 84
           P N+ L    P    KL DFG+   L          G P Y
Sbjct: 185 PANIFLG---PRGRCKLGDFGLLVELGTAGAGEVQEGDPRY 222

>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens} Length = 318

 Score = 42.4 bits (100), Expect = 2e-06
 Identities = 23/82 (28%), Positives = 37/82 (45%), Gaps = 5/82 (6%)

Query: 4   FIITLVARIP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCD 62
               +   IP R++ K+TV ++ +L +       ++R   +P N++L        +KLCD
Sbjct: 113 LKKRMQGPIPERILGKMTVAIVKALYYLKEKHGVIHR-DVKPSNILLDER---GQIKLCD 168

Query: 63  FGISRHLSRDVDVREILGTPDY 84
           FGIS  L  D       G   Y
Sbjct: 169 FGISGRLVDDKAKDRSAGCAAY 190

>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A* Length = 310

 Score = 41.9 bits (99), Expect = 3e-06
 Identities = 14/42 (33%), Positives = 19/42 (45%), Gaps = 4/42 (9%)

Query: 44  PQNLVLTGEYPDCDVKLCDFGISRHLSRDVDVRE-ILGTPDY 84
           P N+ +T       VKL D G+ R  S        ++GTP Y
Sbjct: 164 PANVFIT---ATGVVKLGDLGLGRFFSSKTTAAHSLVGTPYY 202

>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens} Length = 343

 Score = 41.6 bits (98), Expect = 5e-06
 Identities = 14/45 (31%), Positives = 24/45 (53%), Gaps = 7/45 (15%)

Query: 44  PQNLVLTGEYPDCDVKLCDFGISRHLSRDVD--VRE-ILGTPDYV 85
           P N ++     D  +KL DFGI+  +  D    V++  +GT +Y+
Sbjct: 136 PANFLIV----DGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYM 176

>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A* Length = 313

 Score = 41.5 bits (98), Expect = 6e-06
 Identities = 14/45 (31%), Positives = 24/45 (53%), Gaps = 7/45 (15%)

Query: 44  PQNLVLTGEYPDCDVKLCDFGISRHLSRDVD--VRE-ILGTPDYV 85
           P N ++     D  +KL DFGI+  +  D    V++  +GT +Y+
Sbjct: 155 PANFLIV----DGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYM 195

>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A* Length = 298

 Score = 41.1 bits (97), Expect = 7e-06
 Identities = 17/42 (40%), Positives = 25/42 (59%), Gaps = 3/42 (7%)

Query: 44  PQNLVLTGEYPDCDVKLCDFGISRHLSRDVDVREILGTPDYV 85
           P+N++L     D ++KL DFG S  L     +RE+ GTP Y+
Sbjct: 152 PENILLD---DDMNIKLTDFGFSCQLDPGEKLREVCGTPSYL 190

>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A Length = 365

 Score = 40.9 bits (96), Expect = 9e-06
 Identities = 16/42 (38%), Positives = 25/42 (59%), Gaps = 3/42 (7%)

Query: 44  PQNLVLTGEYPDCDVKLCDFGISRHLSRDVDVREILGTPDYV 85
           P+N++L     +  ++L DFG S HL     +RE+ GTP Y+
Sbjct: 228 PENILLD---DNMQIRLSDFGFSCHLEPGEKLRELCGTPGYL 266

>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens} Length = 320

 Score = 40.7 bits (96), Expect = 9e-06
 Identities = 11/42 (26%), Positives = 20/42 (47%), Gaps = 4/42 (9%)

Query: 44  PQNLVLTGEYPDCDVKLCDFGISRHLSRDVDVREILGTPDYV 85
           P NL +  E  D  +K+ DFG++R +      +  L   + +
Sbjct: 148 PANLFINTE--DLVLKIGDFGLARIMDPHYSHKGHL--SEGL 185

>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A* Length = 390

 Score = 40.6 bits (95), Expect = 1e-05
 Identities = 13/45 (28%), Positives = 23/45 (51%), Gaps = 7/45 (15%)

Query: 44  PQNLVLTGEYPDCDVKLCDFGISRHLSRDVD--VRE-ILGTPDYV 85
           P N ++     D  +KL DFGI+  +  D    V++  +G  +Y+
Sbjct: 183 PANFLIV----DGMLKLIDFGIANQMQPDTTSVVKDSQVGAVNYM 223

>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A* Length = 327

 Score = 40.4 bits (95), Expect = 1e-05
 Identities = 23/85 (27%), Positives = 38/85 (44%), Gaps = 5/85 (5%)

Query: 1   MTNFIITLVARIP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVK 59
                  L   IP  ++ K+T+  + +LNH   +   ++R   +P N++L       ++K
Sbjct: 111 YKYVYSVLDDVIPEEILGKITLATVKALNHLKENLKIIHRDI-KPSNILLDRS---GNIK 166

Query: 60  LCDFGISRHLSRDVDVREILGTPDY 84
           LCDFGIS  L   +      G   Y
Sbjct: 167 LCDFGISGQLVDSIAKTRDAGCRPY 191

>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3o71_A 3r63_A 3c9w_A* 2y9q_A* 3sa0_A* 1wzy_A* 2e14_A* 1tvo_A* 2ojg_A* 2oji_A* ... Length = 364

 Score = 40.3 bits (95), Expect = 1e-05
 Identities = 17/42 (40%), Positives = 23/42 (54%), Gaps = 5/42 (11%)

Query: 44  PQNLVLTGEYPDCDVKLCDFGISRHLSRDVDVREILGTPDYV 85
           P NL+L      CD+K+CDFG++R    D D    L   +YV
Sbjct: 156 PSNLLLNT---TCDLKICDFGLARVADPDHDHTGFL--TEYV 192

>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A Length = 316

 Score = 39.6 bits (93), Expect = 3e-05
 Identities = 11/50 (22%), Positives = 21/50 (42%), Gaps = 8/50 (16%)

Query: 44  PQNLVLTGEYPDCDVKLCDFGISRHLSRDVDVREIL--------GTPDYV 85
           P+N++         VK+CDF +   +  + D   I         G+ +Y+
Sbjct: 139 PENILCEHPNQVSPVKICDFDLGSGIKLNGDCSPISTPELLTPCGSAEYM 188

>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A Length = 342

 Score = 39.6 bits (93), Expect = 3e-05
 Identities = 10/44 (22%), Positives = 23/44 (52%), Gaps = 2/44 (4%)

Query: 44  PQNLVLTGEYPDCD-VKLCDFGISRHLSRDVDV-REILGTPDYV 85
           P N++   E  + + +++CDFG ++ L  +  +      T ++V
Sbjct: 144 PSNILYVDESGNPESIRICDFGFAKQLRAENGLLMTPCYTANFV 187

>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* Length = 360

 Score = 39.1 bits (91), Expect = 4e-05
 Identities = 20/81 (24%), Positives = 41/81 (50%), Gaps = 6/81 (7%)

Query: 5   IITLVARIP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDF 63
           ++    RIP +++ KV++ ++  L +       ++R   +P N+++       ++KLCDF
Sbjct: 121 VLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDV-KPSNILVNSR---GEIKLCDF 176

Query: 64  GISRHLSRDVDVREILGTPDY 84
           G+S  L   +     +GT  Y
Sbjct: 177 GVSGQLIDSM-ANSFVGTRSY 196

>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II} Length = 345

 Score = 39.0 bits (91), Expect = 5e-05
 Identities = 12/47 (25%), Positives = 22/47 (46%), Gaps = 6/47 (12%)

Query: 44  PQNLVLTGEYPDCDVKLCDFGISRHLSR-----DVDVREILGTPDYV 85
           P+N + +      ++KL DFG+S+   +        +    GTP +V
Sbjct: 196 PENFLFSTN-KSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFV 241

>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii} Length = 458

 Score = 38.7 bits (90), Expect = 5e-05
 Identities = 11/31 (35%), Positives = 18/31 (58%), Gaps = 3/31 (9%)

Query: 44  PQNLVLTGEYPDCDVKLCDFGISRHLSRDVD 74
           P N ++     DC VK+CDFG++R +    +
Sbjct: 184 PANCLVNQ---DCSVKVCDFGLARTVDYPEN 211

>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A* Length = 432

 Score = 38.2 bits (89), Expect = 8e-05
 Identities = 13/31 (41%), Positives = 20/31 (64%), Gaps = 3/31 (9%)

Query: 44  PQNLVLTGEYPDCDVKLCDFGISRHLSRDVD 74
           P N +L     DC VK+CDFG++R ++ + D
Sbjct: 157 PANCLLNQ---DCSVKVCDFGLARTINSEKD 184

>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A Length = 290

 Score = 38.0 bits (89), Expect = 9e-05
 Identities = 22/75 (29%), Positives = 38/75 (50%), Gaps = 5/75 (6%)

Query: 11  RIP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHL 69
            IP  ++ K+ V+++ +L H  +    ++R   +P N+++        VK+CDFGIS +L
Sbjct: 105 TIPEDILGKIAVSIVKALEHLHSKLSVIHRDV-KPSNVLINAL---GQVKMCDFGISGYL 160

Query: 70  SRDVDVREILGTPDY 84
             DV      G   Y
Sbjct: 161 VDDVAKDIDAGCKPY 175

>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis} Length = 681

 Score = 38.3 bits (89), Expect = 9e-05
 Identities = 12/41 (29%), Positives = 20/41 (48%), Gaps = 7/41 (17%)

Query: 44  PQNLVLTGEYPDCDVKLCDFGISRHLSRDVDVREILGTPDY 84
           P+N++LT E     +KL D G    ++       + GTP +
Sbjct: 210 PENIMLTEE----QLKLIDLGAVSRINSF---GYLYGTPGF 243

>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A* Length = 353

 Score = 38.0 bits (89), Expect = 1e-04
 Identities = 12/47 (25%), Positives = 22/47 (46%), Gaps = 8/47 (17%)

Query: 44  PQNLVLTGEYPDCDVKLCDFGISRHLSRDVDVREILGTP-----DYV 85
           P NL++     +CD+K+CDFG++R +                  ++V
Sbjct: 140 PSNLLINS---NCDLKVCDFGLARIIDESAADNSEPTGQQSGMVEFV 183

>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} Length = 362

 Score = 37.7 bits (88), Expect = 1e-04
 Identities = 9/29 (31%), Positives = 17/29 (58%), Gaps = 3/29 (10%)

Query: 44  PQNLVLTGEYPDCDVKLCDFGISRHLSRD 72
           P N++L     + D+ +CDF ++R  + D
Sbjct: 162 PGNILLAD---NNDITICDFNLAREDTAD 187

>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens} Length = 278

 Score = 37.5 bits (88), Expect = 1e-04
 Identities = 14/43 (32%), Positives = 24/43 (55%), Gaps = 4/43 (9%)

Query: 44  PQNLVLTGEYPDCDVKLCDFGISRHLSRDVDVREIL-GTPDYV 85
             NL+LT    + ++K+ DFG++  L    +    L GTP+Y+
Sbjct: 140 LSNLLLTR---NMNIKIADFGLATQLKMPHEKHYTLCGTPNYI 179

>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major} Length = 360

 Score = 37.7 bits (88), Expect = 1e-04
 Identities = 11/29 (37%), Positives = 17/29 (58%), Gaps = 2/29 (6%)

Query: 44  PQNLVLTGEYPDCDVKLCDFGISRHLSRD 72
           P N+++     D  +KLCDFG ++ LS  
Sbjct: 159 PHNVLVNEA--DGTLKLCDFGSAKKLSPS 185

>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} Length = 413

 Score = 37.3 bits (86), Expect = 1e-04
 Identities = 7/44 (15%), Positives = 10/44 (22%), Gaps = 5/44 (11%)

Query: 44  PQNLVLTGEYPDCDVKLCDFGISRHLSRDVDVR--EILGTPDYV 85
           P ++VL        V L  F                    P+  
Sbjct: 239 PVDIVLD---QRGGVFLTGFEHLVRDGASAVSPIGRGFAPPETT 279

>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II} Length = 383

 Score = 37.0 bits (86), Expect = 2e-04
 Identities = 12/29 (41%), Positives = 18/29 (62%), Gaps = 2/29 (6%)

Query: 44  PQNLVLTGEYPDCDVKLCDFGISRHLSRD 72
           PQNL++  +  D  +KLCDFG ++ L   
Sbjct: 169 PQNLLVNSK--DNTLKLCDFGSAKKLIPS 195

>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A* Length = 464

 Score = 36.7 bits (85), Expect = 2e-04
 Identities = 10/29 (34%), Positives = 16/29 (55%), Gaps = 3/29 (10%)

Query: 44  PQNLVLTGEYPDCDVKLCDFGISRHLSRD 72
           P N+V+     DC +K+ DFG++R     
Sbjct: 192 PSNIVVKS---DCTLKILDFGLARTAGTS 217

>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ... Length = 367

 Score = 36.5 bits (85), Expect = 3e-04
 Identities = 11/27 (40%), Positives = 18/27 (66%), Gaps = 3/27 (11%)

Query: 44  PQNLVLTGEYPDCDVKLCDFGISRHLS 70
           P NL +     DC++K+ DFG++RH +
Sbjct: 160 PSNLAVNE---DCELKILDFGLARHTA 183

>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A* Length = 299

 Score = 36.6 bits (85), Expect = 3e-04
 Identities = 14/55 (25%), Positives = 23/55 (41%), Gaps = 16/55 (29%)

Query: 44  PQNLVLTGEYPDCDVKLCDFGISRHLSRDVDVREIL-------------GTPDYV 85
           P N+  T    D  VK+ DFG+   + +D + + +L             GT  Y+
Sbjct: 146 PSNIFFT---MDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYM 197

>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7 Length = 367

 Score = 36.5 bits (85), Expect = 3e-04
 Identities = 10/29 (34%), Positives = 17/29 (58%), Gaps = 3/29 (10%)

Query: 44  PQNLVLTGEYPDCDVKLCDFGISRHLSRD 72
           P NL +     DC++K+ DFG++R    +
Sbjct: 156 PGNLAVNE---DCELKILDFGLARQADSE 181

>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens} Length = 353

 Score = 36.5 bits (85), Expect = 4e-04
 Identities = 11/29 (37%), Positives = 18/29 (62%), Gaps = 3/29 (10%)

Query: 44  PQNLVLTGEYPDCDVKLCDFGISRHLSRD 72
           P NL +     DC++K+ DFG++RH   +
Sbjct: 154 PGNLAVNE---DCELKILDFGLARHADAE 179

>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ... Length = 420

 Score = 36.2 bits (84), Expect = 4e-04
 Identities = 20/54 (37%), Positives = 23/54 (42%), Gaps = 16/54 (29%)

Query: 44  PQNLVLTGEYPDCDV-KLCDFGISRHLSRDVDVRE------------ILGTPDY 84
           PQNL+L    PD  V KLCDFG ++ L R                  I G  DY
Sbjct: 184 PQNLLLD---PDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGATDY 234

>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A* Length = 371

 Score = 36.2 bits (83), Expect = 5e-04
 Identities = 8/42 (19%), Positives = 11/42 (26%), Gaps = 6/42 (14%)

Query: 44  PQNLVLTGEYPDCDVKLCDFGISRHLSRDVDVREILGTPDYV 85
           P NL +    PD  + L D      +            P   
Sbjct: 222 PDNLFIM---PDGRLMLGDVSALWKVG---TRGPASSVPVTY 257

>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II} Length = 388

 Score = 35.8 bits (83), Expect = 5e-04
 Identities = 12/34 (35%), Positives = 17/34 (50%), Gaps = 3/34 (8%)

Query: 44  PQNLVLTGEYPDCDVKLCDFGISRHLSRDVDVRE 77
           P N++L     +C VK+ DFG+SR       V  
Sbjct: 137 PSNILLNA---ECHVKVADFGLSRSFVNIRRVTN 167

>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ... Length = 371

 Score = 35.8 bits (83), Expect = 5e-04
 Identities = 11/38 (28%), Positives = 19/38 (50%), Gaps = 3/38 (7%)

Query: 44  PQNLVLTGEYPDCDVKLCDFGISRHLSRDVDVREILGT 81
           P N+V+     DC +K+ DFG++R       +   + T
Sbjct: 155 PSNIVVKS---DCTLKILDFGLARTAGTSFMMTPYVVT 189

>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A Length = 303

 Score = 35.8 bits (83), Expect = 6e-04
 Identities = 13/57 (22%), Positives = 26/57 (45%), Gaps = 18/57 (31%)

Query: 44  PQNLVLTGEYPDCDVKLCDFGISRHLSRDVDVREIL---------------GTPDYV 85
           P N+ +       +VK+ DFG+++++ R +D+ ++                GT  YV
Sbjct: 144 PMNIFIDE---SRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYV 197

>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens} Length = 326

 Score = 35.8 bits (83), Expect = 6e-04
 Identities = 18/39 (46%), Positives = 24/39 (61%), Gaps = 4/39 (10%)

Query: 45  QNLVLTGEYPDCDVKLCDFGISRHLSRDVDVRE-ILGTP 82
           QN++LT    + +VKL DFG+S  L R V  R   +GTP
Sbjct: 158 QNVLLT---ENAEVKLVDFGVSAQLDRTVGRRNTFIGTP 193

>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A Length = 361

 Score = 35.4 bits (82), Expect = 8e-04
 Identities = 14/42 (33%), Positives = 22/42 (52%), Gaps = 1/42 (2%)

Query: 44  PQNLVLTGEYPDCDVKLCDFGISRHLSRDVDVREILGTPDYV 85
            +N +L G  P   +K+CDFG S+        +  +GTP Y+
Sbjct: 144 LENTLLDGS-PAPRLKICDFGYSKSSVLHSQPKSTVGTPAYI 184

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	87
4aw0_A	311	HPDK1, 3-phosphoinositide-dependent protein kinase	99.87
4fih_A	346	Serine/threonine-protein kinase PAK 4; kinase doma	99.86
3hyh_A	275	Carbon catabolite-derepressing protein kinase; kin	99.86
4fie_A	423	Serine/threonine-protein kinase PAK 4; kinase doma	99.85
3ubd_A	304	Ribosomal protein S6 kinase alpha-3; kinase-inhibi	99.85
3fpq_A	290	Serine/threonine-protein kinase WNK1; protein seri	99.84
4g3f_A	336	NF-kappa-beta-inducing kinase; non-RD kinase, prot	99.84
4f9c_A	361	Cell division cycle 7-related protein kinase; Ser/	99.84
3omv_A	307	RAF proto-oncogene serine/threonine-protein kinas;	99.84
4b9d_A	350	Serine/threonine-protein kinase NEK1; transferase,	99.83
4g31_A	299	Eukaryotic translation initiation factor 2-alpha;	99.82
3v5w_A	689	G-protein coupled receptor kinase 2; inhibitor com	99.81
4b99_A	398	Mitogen-activated protein kinase 7; transferase, i	99.81
3uto_A	573	Twitchin; kinase, muscle sarcomere, transferase; H	99.8
4ase_A	353	Vascular endothelial growth factor receptor 2; tra	99.79
4aoj_A	329	High affinity nerve growth factor receptor; transf	99.77
4asz_A	299	BDNF/NT-3 growth factors receptor; transferase, TR	99.76
4gt4_A	308	Tyrosine-protein kinase transmembrane receptor RO;	99.76
4azs_A	569	Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15	99.76
3hmm_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	99.75
4aw2_A	437	Serine/threonine-protein kinase MRCK alpha; transf	99.71
3fe3_A	328	MAP/microtubule affinity-regulating kinase 3; seri	99.7
2vd5_A	412	DMPK protein; serine/threonine-protein kinase, kin	99.7
4dc2_A	396	Protein kinase C IOTA type; kinase, substrate, cel	99.7
4fr4_A	384	YANK1, serine/threonine-protein kinase 32A; struct	99.69
3ttj_A	464	Mitogen-activated protein kinase 10; JNK3, protein	99.69
3p1a_A	311	MYT1 kinase, membrane-associated tyrosine- and thr	99.69
3txo_A	353	PKC-L, NPKC-ETA, protein kinase C ETA type; phosph	99.69
3e7e_A	365	HBUB1, BUB1A, mitotic checkpoint serine/threonine-	99.69
3pfq_A	674	PKC-B, PKC-beta, protein kinase C beta type; phosp	99.68
3op5_A	364	Serine/threonine-protein kinase VRK1; adenosine tr	99.68
1o6l_A	337	RAC-beta serine/threonine protein kinase; protein	99.68
3h4j_B	336	AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin	99.68
2vuw_A	336	Serine/threonine-protein kinase haspin; cell cycle	99.68
1nxk_A	400	MAP kinase-activated protein kinase 2; MK2, phosph	99.68
2i0e_A	353	Protein kinase C-beta II; serine/threonine protein	99.67
3rp9_A	458	Mitogen-activated protein kinase; structural genom	99.67
4e7w_A	394	Glycogen synthase kinase 3; GSK3, PTyr195, transfe	99.67
1j1b_A	420	Glycogen synthase kinase-3 beta; complex, TAU, AMP	99.67
3oz6_A	388	Mitogen-activated protein kinase 1, serine/threon	99.67
3a8x_A	345	Protein kinase C IOTA type; transferase; HET: TPO;	99.67
2r5t_A	373	Serine/threonine-protein kinase SGK1; AGC protein	99.66
1xjd_A	345	Protein kinase C, theta type; PKC-theta, ATP, AMP,	99.66
2izr_A	330	Casein kinase I isoform gamma-3; serine/threonine-	99.66
2bdw_A	362	Hypothetical protein K11E8.1D; kinase, calmodulin	99.66
3n9x_A	432	Phosphotransferase; malaria kinase, structural gen	99.66
3g33_A	308	Cell division protein kinase 4; Ser/Thr protein ki	99.66
3v8s_A	410	RHO-associated protein kinase 1; dimerization, myo	99.66
3s95_A	310	LIMK-1, LIM domain kinase 1; structural genomics,	99.65
1tki_A	321	Titin; serine kinase, muscle, autoinhibition; 2.00	99.65
2x4f_A	373	Myosin light chain kinase family member 4; LUNG, b	99.65
3mwu_A	486	Calmodulin-domain protein kinase 1; serine/threoni	99.65
2acx_A	576	G protein-coupled receptor kinase 6; GRK, G transf	99.65
3o0g_A	292	Cell division protein kinase 5; kinase activator c	99.65
3nsz_A	330	CK II alpha, casein kinase II subunit alpha; inhib	99.65
3soa_A	444	Calcium/calmodulin-dependent protein kinase type a	99.65
3lij_A	494	Calcium/calmodulin dependent protein kinase with A	99.65
3c0i_A	351	Peripheral plasma membrane protein CASK; neurexin,	99.64
3sv0_A	483	Casein kinase I-like; typical kinase domain fold,	99.64
2yab_A	361	Death-associated protein kinase 2; apoptosis, tran	99.64
3i6u_A	419	CDS1, serine/threonine-protein kinase CHK2; Ser/Th	99.64
2y94_A	476	5'-AMP-activated protein kinase catalytic subunit;	99.64
3dls_A	335	PAS domain-containing serine/threonine-protein KI;	99.64
1csn_A	298	Casein kinase-1; phosphotransferase; HET: ATP; 2.0	99.64
3uzp_A	296	CKI-delta, CKID, casein kinase I isoform delta; CK	99.64
3eb0_A	383	Putative uncharacterized protein; kinase cryptospo	99.63
1rdq_E	350	PKA C-alpha, CAMP-dependent protein kinase, alpha-	99.63
3zgw_A	347	Maternal embryonic leucine zipper kinase; transfer	99.63
4hgt_A	296	Casein kinase I isoform delta; CK1D, inhibitor, tr	99.63
3q5i_A	504	Protein kinase; CDPK, malaria, phosphotransferase,	99.63
3niz_A	311	Rhodanese family protein; structural genomics, str	99.63
1cm8_A	367	Phosphorylated MAP kinase P38-gamma; phosphorylati	99.63
1kob_A	387	Twitchin; kinase, intrasteric regulation; 2.30A {A	99.63
4ejn_A	446	RAC-alpha serine/threonine-protein kinase; AKT1, a	99.62
1fot_A	318	TPK1 delta, CAMP-dependent protein kinase type 1;	99.62
2y7j_A	365	Phosphorylase B kinase gamma catalytic chain, test	99.62
3q60_A	371	ROP5B; pseudokinase, transferase; HET: ATP; 1.72A	99.62
4euu_A	319	Serine/threonine-protein kinase TBK1; ATP binding,	99.62
2zmd_A	390	Dual specificity protein kinase TTK; MPS1, T686A,	99.62
3nyv_A	484	Calmodulin-domain protein kinase 1; serine/threoni	99.62
3mi9_A	351	Cell division protein kinase 9; P-TEFB, HIV-1, pro	99.62
3f3z_A	277	Calcium/calmodulin-dependent protein kinase with d	99.62
3kex_A	325	Receptor tyrosine-protein kinase ERBB-3; kinase do	99.62
3a62_A	327	Ribosomal protein S6 kinase beta-1; kinase domain,	99.62
3kn6_A	325	Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1	99.62
3dzo_A	413	Rhoptry kinase domain; parasitic disease, transfer	99.62
3c4z_A	543	Rhodopsin kinase; Ser/Thr kinase, RGS homology dom	99.62
2xrw_A	371	Mitogen-activated protein kinase 8; transcription,	99.61
1vzo_A	355	Ribosomal protein S6 kinase alpha 5; protein kinas	99.61
2y0a_A	326	Death-associated protein kinase 1; transferase, ca	99.61
2zv2_A	298	Calcium/calmodulin-dependent protein kinase kinas;	99.61
3uc3_A	361	Serine/threonine-protein kinase SRK2I; SNRK2, ABA	99.61
3fxz_A	297	Serine/threonine-protein kinase PAK 1; transferase	99.61
3qd2_B	332	Eukaryotic translation initiation factor 2-alpha;	99.61
3dbq_A	343	Dual specificity protein kinase TTK; MPS1 structur	99.61
3is5_A	285	Calcium-dependent protein kinase; CDPK, structural	99.61
2pmi_A	317	Negative RE, cyclin-dependent protein kinase PHO85	99.61
3lb7_A	307	RAF proto-oncogene serine/threonine-protein kinas;	99.61
3kk8_A	284	Calcium/calmodulin dependent protein kinase II; AT	99.6
3poz_A	327	Epidermal growth factor receptor; kinase domain, a	99.6
2a19_B	284	Interferon-induced, double-stranded RNA-activated	99.6
3mtl_A	324	Cell division protein kinase 16; pctaire1, indirub	99.6
1ob3_A	288	PFPK5, cell division control protein 2 homolog; tr	99.6
3lm5_A	327	Serine/threonine-protein kinase 17B; STK17B, serin	99.6
3lzb_A	327	Epidermal growth factor receptor; epidermal growth	99.59
2w4o_A	349	Calcium/calmodulin-dependent protein kinase type I	99.59
3byv_A	377	Rhoptry kinase; malaria, transferase, structural g	99.59
2fst_X	367	Mitogen-activated protein kinase 14; active mutant	99.59
3pg1_A	362	Mitogen-activated protein kinase, putative (MAP K	99.59
4eqm_A	294	Protein kinase; transferase; HET: ANP; 3.00A {Stap	99.59
2qr7_A	342	Ribosomal protein S6 kinase alpha-3; kinase domain	99.59
4e5w_A	302	Tyrosine-protein kinase JAK1; kinase domain, trans	99.59
3ugc_A	295	Tyrosine-protein kinase JAK2; small molecule inhib	99.59
3e3p_A	360	Protein kinase, putative glycogen synthase kinase;	99.58
3l9p_A	367	Anaplastic lymphoma kinase; kinase domain, ATP-bin	99.58
1ua2_A	346	CAK, cell division protein kinase 7; cell cycle, p	99.58
2eue_A	275	Carbon catabolite derepressing protein kinase; kin	99.58
1mp8_A	281	Focal adhesion kinase 1; tyrosine protein kinase,	99.58
1u5q_A	348	Serine/threonine protein kinase TAO2; transferase;	99.58
3lxl_A	327	Tyrosine-protein kinase JAK3; TYK2, inflammation,	99.58
3rgf_A	405	Cyclin-dependent kinase 8; protein kinase complex,	99.58
2ycf_A	322	Serine/threonine-protein kinase CHK2; transferase,	99.58
2a2a_A	321	Death-associated protein kinase 2; autoinhibition,	99.58
3sxs_A	268	Cytoplasmic tyrosine-protein kinase BMX; transfera	99.57
3kul_A	325	Ephrin type-A receptor 8; ATP-binding, kinase, nuc	99.57
3ork_A	311	Serine/threonine protein kinase; structural genomi	99.57
3tki_A	323	Serine/threonine-protein kinase CHK1; cell checkpo	99.57
2c30_A	321	Serine/threonine-protein kinase PAK 6; CRIB domain	99.57
1blx_A	326	Cyclin-dependent kinase 6; inhibitor protein, cycl	99.57
3soc_A	322	Activin receptor type-2A; structural genomics cons	99.57
4eut_A	396	Serine/threonine-protein kinase TBK1; ATP binding,	99.57
1phk_A	298	Phosphorylase kinase; glycogen metabolism, transfe	99.57
2psq_A	370	Fibroblast growth factor receptor 2; kinase domain	99.57
2jii_A	352	Serine/threonine-protein kinase VRK3 molecule: VA	99.57
2v62_A	345	Serine/threonine-protein kinase VRK2; transferase,	99.56
3qyz_A	364	Mitogen-activated protein kinase 1; transferase, s	99.56
3q4u_A	301	Activin receptor type-1; structural genomics conso	99.56
3og7_A	289	AKAP9-BRAF fusion protein; proto-oncogene, V600E,	99.56
3kvw_A	429	DYRK2, dual specificity tyrosine-phosphorylation-r	99.56
3fme_A	290	Dual specificity mitogen-activated protein kinase;	99.56
3cok_A	278	Serine/threonine-protein kinase PLK4; POLO-like ki	99.56
3cbl_A	377	C-FES, proto-oncogene tyrosine-protein kinase FES/	99.56
3g2f_A	336	Bone morphogenetic protein receptor type-2; kinase	99.56
2ac3_A	316	MAP kinase-interacting serine/threonine kinase 2;	99.55
1x8b_A	289	WEE1HU, WEE1-like protein kinase; cell cycle, tran	99.55
3llt_A	360	Serine/threonine kinase-1, pflammer; lammer kinase	99.55
3a99_A	320	Proto-oncogene serine/threonine-protein kinase PI;	99.55
3vhe_A	359	Vascular endothelial growth factor receptor 2; kin	99.55
3cc6_A	281	Protein tyrosine kinase 2 beta; focal adhesion kin	99.55
3an0_A	340	Dual specificity mitogen-activated protein kinase;	99.55
2h6d_A	276	5'-AMP-activated protein kinase catalytic subunit	99.54
3bhy_A	283	Death-associated protein kinase 3; death associate	99.54
3tt0_A	382	Basic fibroblast growth factor receptor 1; kinase	99.54
1u46_A	291	ACK-1, activated CDC42 kinase 1; tyrosine kinase,	99.54
4agu_A	311	Cyclin-dependent kinase-like 1; transferase, phosp	99.54
3gen_A	283	Tyrosine-protein kinase BTK; bruton'S tyrosine kin	99.54
3f66_A	298	Hepatocyte growth factor receptor; C-Met, protein	99.54
3mdy_A	337	Bone morphogenetic protein receptor type-1B; compl	99.54
3ll6_A	337	Cyclin G-associated kinase; transferase, protein k	99.54
4fvq_A	289	Tyrosine-protein kinase JAK2; janus protein kinase	99.54
1wak_A	397	Serine/threonine-protein kinase SPRK1; SRPK, trans	99.54
4hcu_A	269	Tyrosine-protein kinase ITK/TSK; transferase-trans	99.53
3com_A	314	Serine/threonine-protein kinase 4; MST1, STE20-lik	99.53
2wei_A	287	Calmodulin-domain protein kinase 1, putative; nucl	99.53
3p23_A	432	Serine/threonine-protein kinase/endoribonuclease;	99.53
3fhr_A	336	MAP kinase-activated protein kinase 3; kinase-inhi	99.53
2owb_A	335	Serine/threonine-protein kinase PLK1; catalytic do	99.53
1u59_A	287	Tyrosine-protein kinase ZAP-70; transferase; HET:	99.53
1zy4_A	303	Serine/threonine-protein kinase GCN2; translation	99.53
3gbz_A	329	Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-	99.53
2w1i_A	326	JAK2; chromosomal rearrangement, nucleotide-bindin	99.52
2rio_A	434	Serine/threonine-protein kinase/endoribonuclease I	99.52
1t46_A	313	HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom	99.52
2qkw_B	321	Protein kinase; three-helix bundle motif, AVRPTO-P	99.52
2vx3_A	382	Dual specificity tyrosine-phosphorylation- regula	99.52
3c1x_A	373	Hepatocyte growth factor receptor; receptor tyrosi	99.52
2eu9_A	355	Dual specificity protein kinase CLK3; kinase domai	99.52
3uim_A	326	Brassinosteroid insensitive 1-associated receptor;	99.52
3en9_A	540	Glycoprotease, O-sialoglycoprotein endopeptidase/p	99.52
3pls_A	298	Macrophage-stimulating protein receptor; protein k	99.52
1luf_A	343	Muscle-specific tyrosine kinase receptor MUSK; pho	99.52
2ivs_A	314	Proto-oncogene tyrosine-protein kinase receptor RE	99.52
2b9h_A	353	MAP kinase FUS3, mitogen-activated protein kinase	99.52
2pzi_A	681	Probable serine/threonine-protein kinase PKNG; ATP	99.52
2rku_A	294	Serine/threonine-protein kinase PLK1; structure of	99.52
4aaa_A	331	Cyclin-dependent kinase-like 2; transferase, phosp	99.52
4f0f_A	287	Serine/threonine-protein kinase ROCO4; LRRK2, ATP-	99.51
3p86_A	309	Serine/threonine-protein kinase CTR1; ETR1, ERS1,	99.51
1rjb_A	344	FL cytokine receptor; kinase, structure, autoinhib	99.51
4exu_A	371	Mitogen-activated protein kinase 13; P38 kinase, t	99.51
1z57_A	339	Dual specificity protein kinase CLK1; protein tyro	99.51
2qol_A	373	Ephrin receptor; receptor tyrosine kinase, juxtame	99.51
3fdn_A	279	Serine/threonine-protein kinase 6; aurora kinase i	99.51
2j0j_A	656	Focal adhesion kinase 1; cell migration, FERM, tra	99.51
2dyl_A	318	Dual specificity mitogen-activated protein kinase	99.51
3qup_A	323	Tyrosine-protein kinase receptor TYRO3; protein ki	99.5
2ozo_A	613	Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t	99.5
3hko_A	345	Calcium/calmodulin-dependent protein kinase with d	99.5
2x7f_A	326	TRAF2 and NCK-interacting protein kinase; serine/t	99.5
1mqb_A	333	Ephrin type-A receptor 2; tyrosine protein kinase,	99.5
1k9a_A	450	Carboxyl-terminal SRC kinase; COOH-terminal SRC ki	99.5
4fl3_A	635	Tyrosine-protein kinase SYK; transferase; HET: ANP	99.5
1p4o_A	322	Insulin-like growth factor I receptor protein; IGF	99.5
1t4h_A	290	Serine/threonine-protein kinase WNK1; protein seri	99.5
1qcf_A	454	Haematopoetic cell kinase (HCK); tyrosine kinase-i	99.5
2xir_A	316	Vascular endothelial growth factor receptor 2; ang	99.49
2clq_A	295	Mitogen-activated protein kinase kinase kinase 5;	99.49
3gni_B	389	Strad alpha; kinase fold, pseudokinase, alpha heli	99.49
1xbb_A	291	Tyrosine-protein kinase SYK; gleevec, STI-571, ima	99.49
2vgo_A	284	Serine/threonine-protein kinase 12-A; nucleotide-b	99.49
1q8y_A	373	SR protein kinase; transferase; HET: ADP ADE; 2.05	99.49
3aln_A	327	Dual specificity mitogen-activated protein kinase;	99.49
3cek_A	313	Dual specificity protein kinase TTK; HMPS1, PYT, E	99.49
1opk_A	495	P150, C-ABL, proto-oncogene tyrosine-protein kinas	99.49
1fvr_A	327	Tyrosine-protein kinase TIE-2; tyrosine kinase, tr	99.49
2nru_A	307	Interleukin-1 receptor-associated kinase 4; inhibi	99.48
3t9t_A	267	Tyrosine-protein kinase ITK/TSK; kinase domain, al	99.48
2i1m_A	333	Macrophage colony-stimulating factor 1 receptor; k	99.48
1fmk_A	452	C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros	99.48
2iwi_A	312	Serine/threonine-protein kinase PIM-2; nucleotide-	99.48
1b6c_B	342	TGF-B superfamily receptor type I; complex (isomer	99.48
2jam_A	304	Calcium/calmodulin-dependent protein kinase type 1	99.48
3coi_A	353	Mitogen-activated protein kinase 13; P38D, P38delt	99.48
2j7t_A	302	Serine/threonine-protein kinase 10; transferase, A	99.48
2h34_A	309	Serine/threonine-protein kinase PKNE; apoenzyme, t	99.48
3a7i_A	303	MST3 kinase, serine/threonine kinase 24 (STE20 hom	99.47
2wtk_C	305	Serine/threonine-protein kinase 11; transferase-me	99.47
2i6l_A	320	Mitogen-activated protein kinase 6; MAPK6, ERK3, e	99.47
2yfx_A	327	Tyrosine-protein kinase receptor; nucleotide-bindi	99.47
3qa8_A	676	MGC80376 protein; kinase ubiquitin-like domain, ph	99.47
2pvf_A	334	Fibroblast growth factor receptor 2; kinase domain	99.47
2yex_A	276	Serine/threonine-protein kinase CHK1; transferase,	99.47
2r3i_A	299	Cell division protein kinase 2; serine/threonine-p	99.46
3lxp_A	318	Non-receptor tyrosine-protein kinase TYK2; JAK3, i	99.46
3brb_A	313	Proto-oncogene tyrosine-protein kinase MER; ATP-bi	99.46
2y4i_B	319	KSR2, HKSR2, kinase suppressor of RAS 2; transfera	99.46
2pml_X	348	PFPK7, Ser/Thr protein kinase; phosphorylati trans	99.46
1qpc_A	279	LCK kinase; alpha beta fold, transferase; HET: PTR	99.45
2buj_A	317	Serine/threonine-protein kinase 16; transferase, A	99.45
1byg_A	278	CSK, protein (C-terminal SRC kinase); protein kina	99.44
2h8h_A	535	Proto-oncogene tyrosine-protein kinase SRC; SRC ki	99.44
3gxj_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	99.44
2vwi_A	303	Serine/threonine-protein kinase OSR1; STE kinase,	99.44
3kfa_A	288	Tyrosine-protein kinase ABL1; CML, drug resistance	99.44
3eqc_A	360	Dual specificity mitogen-activated protein kinase;	99.43
3dtc_A	271	Mitogen-activated protein kinase kinase kinase 9;	99.42
2w5a_A	279	Serine/threonine-protein kinase NEK2; Ser/Thr prot	99.42
2wqm_A	310	Serine/threonine-protein kinase NEK7; ATP-binding,	99.42
2eva_A	307	TAK1 kinase - TAB1 chimera fusion protein; transfe	99.38
3kmu_A	271	ILK, integrin-linked kinase; cell adhesion, ANK re	99.3
1zar_A	282	RIO2 kinase; serine kinase, winged-helix, RIO doma	99.25
3m2w_A	299	MAP kinase-activated protein kinase 2; small molec	99.22
1zth_A	258	RIO1 serine protein kinase; ribosome biogenesis, r	99.11
3uqc_A	286	Probable conserved transmembrane protein; structur	98.87
4gyi_A	397	RIO2 kinase; protein kinase, ADP complex, phosphoa	98.59
1nd4_A	264	Aminoglycoside 3'-phosphotransferase; protein kina	96.93
3tm0_A	263	Aminoglycoside 3'-phosphotransferase; protein kina	96.69
3dxp_A	359	Putative acyl-COA dehydrogenase; protein kinase-li	96.43
2q83_A	346	YTAA protein; 2635576, structural genomics, joint	95.64
2pyw_A	420	Uncharacterized protein; 5-methylthioribose kinase	94.28
3sg8_A	304	APH(2'')-ID; antibiotic resistance enzyme, transfe	92.09
2ppq_A	322	HSK, HK, homoserine kinase; structural genomics, M	91.69
4gkh_A	272	Aminoglycoside 3'-phosphotransferase APHA1-IAB; py	91.56
3r70_A	320	Aminoglycoside phosphotransferase; structural geno	91.04
3tdw_A	306	Gentamicin resistance protein; kinase, phosphoryl	90.86
3ovc_A	362	Hygromycin-B 4-O-kinase; aminoglycoside phosphotra	90.08
3ats_A	357	Putative uncharacterized protein; hypothetical pro	89.78
2olc_A	397	MTR kinase, methylthioribose kinase; kinase ADP-2H	89.27
3csv_A	333	Aminoglycoside phosphotransferase; YP_614837.1, ph	89.13
3c5i_A	369	Choline kinase; choline, kinase, malaria, transfer	88.23
3i1a_A	339	Spectinomycin phosphotransferase; protein kinase,	87.0
3dxq_A	301	Choline/ethanolamine kinase family protein; NP_106	86.94
2qg7_A	458	Ethanolamine kinase PV091845; malaria, SGC, struct	85.06
1zyl_A	328	Hypothetical protein YIHE; putative protein kinase	84.44
1nw1_A	429	Choline kinase (49.2 KD); phospholipid synthesis,	83.6
3g15_A	401	CK, chetk-alpha, choline kinase alpha; non-protein	83.13
3feg_A	379	Choline/ethanolamine kinase; non-protein kinase, c	80.55

>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...

Probab=99.87  E-value=2.3e-22  Score=123.97  Aligned_cols=73  Identities=19%  Similarity=0.415  Sum_probs=63.6

Q ss_pred             hhcH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCc---cccccccccccc
Q psy8010          10 ARIP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDV---DVREILGTPDYV   85 (87)
Q Consensus        10 ~~~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~---~~~~~~gt~~y~   85 (87)
                      +.++ ++++.++.|++.|+  .|+|+++|+|||+||+||+++.+   +.+|++|||+|+.+....   ...+.+||+.||
T Consensus       127 ~~l~e~~~~~~~~qi~~al--~ylH~~~IiHRDlKPeNILl~~~---g~vKl~DFGla~~~~~~~~~~~~~~~~GTp~Ym  201 (311)
T 4aw0_A          127 GSFDETCTRFYTAEIVSAL--EYLHGKGIIHRDLKPENILLNED---MHIQITDFGTAKVLSPESKQARANSFVGTAQYV  201 (311)
T ss_dssp             SSCCHHHHHHHHHHHHHHH--HHHHHTTEECSCCSGGGEEECTT---SCEEECCCTTCEECCTTTTCCCBCCCCSCGGGC
T ss_pred             CCCCHHHHHHHHHHHHHHH--HHHHHCCCccCCCCHHHeEEcCC---CCEEEEEcCCceecCCCCCcccccCcccCcccC
Confidence            4566 58999999999999  99999999999999999999875   789999999999874332   345789999999


Q ss_pred             cC
Q psy8010          86 GE   87 (87)
Q Consensus        86 aP   87 (87)
                      ||
T Consensus       202 AP  203 (311)
T 4aw0_A          202 SP  203 (311)
T ss_dssp             CH
T ss_pred             CH
Confidence            98

>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*

Probab=99.86  E-value=3e-22  Score=124.98  Aligned_cols=73  Identities=23%  Similarity=0.458  Sum_probs=64.2

Q ss_pred             hhcH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCC-ccccccccccccccC
Q psy8010          10 ARIP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRD-VDVREILGTPDYVGE   87 (87)
Q Consensus        10 ~~~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~-~~~~~~~gt~~y~aP   87 (87)
                      ++++ +++..++.|++.|+  .|+|+++|+|||+||+||+++.+   +.+|++|||+|+.+... ....+.+||+.||||
T Consensus       165 ~~l~e~~~~~~~~qi~~aL--~ylH~~~IiHRDlKp~NILl~~~---g~vKl~DFGla~~~~~~~~~~~~~~GTp~YmAP  239 (346)
T 4fih_A          165 TRMNEEQIAAVCLAVLQAL--SVLHAQGVIHRDIKSDSILLTHD---GRVKLSDFGFCAQVSKEVPRRKSLVGTPYWMAP  239 (346)
T ss_dssp             SCCCHHHHHHHHHHHHHHH--HHHHHTTEECCCCSGGGEEECTT---CCEEECCCTTCEECCSSSCCBCCCCSCGGGCCH
T ss_pred             CCCCHHHHHHHHHHHHHHH--HHHHHCCcccccCCHHHEEECCC---CCEEEecCcCceecCCCCCcccccccCcCcCCH
Confidence            3456 58999999999999  99999999999999999999885   78999999999987544 345678999999998

>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A

Probab=99.86  E-value=2e-22  Score=122.52  Aligned_cols=73  Identities=19%  Similarity=0.454  Sum_probs=53.7

Q ss_pred             hhcH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCccccccccccccccC
Q psy8010          10 ARIP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDVDVREILGTPDYVGE   87 (87)
Q Consensus        10 ~~~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~~~~~~~gt~~y~aP   87 (87)
                      ++++ +++..++.|++.|+  .|+|+++++|||+||+|++++.+   ..+|++|||+|+...+.....+.+||+.||||
T Consensus       107 ~~l~e~~~~~~~~qi~~al--~ylH~~~IiHRDiKP~NILl~~~---~~vkl~DFGla~~~~~~~~~~~~~GT~~Y~AP  180 (275)
T 3hyh_A          107 DKMSEQEARRFFQQIISAV--EYCHRHKIVHRDLKPENLLLDEH---LNVKIADFGLSNIMTDGNFLKTSCGSPNYAAP  180 (275)
T ss_dssp             CSCCHHHHHHHHHHHHHHH--HHHHHTTCCCCCCCTTTEEECTT---CCEEECCSSCC---------------CTTSCH
T ss_pred             CCCCHHHHHHHHHHHHHHH--HHHHHCCcccccCChHHeEECCC---CCEEEeecCCCeecCCCCccCCeeECcccCCh
Confidence            3466 58999999999999  99999999999999999999885   78999999999877666666778999999998

>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}

Probab=99.85  E-value=9.8e-22  Score=125.27  Aligned_cols=73  Identities=23%  Similarity=0.458  Sum_probs=64.1

Q ss_pred             hhcH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCC-ccccccccccccccC
Q psy8010          10 ARIP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRD-VDVREILGTPDYVGE   87 (87)
Q Consensus        10 ~~~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~-~~~~~~~gt~~y~aP   87 (87)
                      ++++ +++..++.|++.||  .|||+++|+|||+||+||+++.+   +.+||+|||+|+.+... ....+.+||++||||
T Consensus       242 ~~l~e~~~~~~~~qil~aL--~ylH~~~IiHRDiKp~NILl~~~---g~vKl~DFGla~~~~~~~~~~~~~~GTp~YmAP  316 (423)
T 4fie_A          242 TRMNEEQIAAVCLAVLQAL--SVLHAQGVIHRDIKSDSILLTHD---GRVKLSDFGFCAQVSKEVPRRKSLVGTPYWMAP  316 (423)
T ss_dssp             SCCCHHHHHHHHHHHHHHH--HHHHHTTEECCCCSTTTEEECTT---CCEEECCCTTCEECCSSCCCBCCCEECTTTCCH
T ss_pred             cCCCHHHHHHHHHHHHHHH--HHHHHCCeecccCCHHHEEEcCC---CCEEEecCccceECCCCCccccccccCcCcCCH
Confidence            3455 58999999999999  99999999999999999999885   78999999999987544 345678999999998

>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*

Probab=99.85  E-value=8e-22  Score=121.28  Aligned_cols=73  Identities=22%  Similarity=0.301  Sum_probs=61.5

Q ss_pred             hhcH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCC-CccccccccccccccC
Q psy8010          10 ARIP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSR-DVDVREILGTPDYVGE   87 (87)
Q Consensus        10 ~~~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~-~~~~~~~~gt~~y~aP   87 (87)
                      +.++ +++..++.|++.|+  .|+|+++++|||+||+|++++.+   +.+|++|||+|+.... .....+.+||+.||||
T Consensus       121 ~~l~e~~~~~~~~qi~~aL--~ylH~~~IiHRDlKp~NILl~~~---g~vKl~DFGla~~~~~~~~~~~~~~GT~~YmAP  195 (304)
T 3ubd_A          121 VMFTEEDVKFYLAELALAL--DHLHSLGIIYRDLKPENILLDEE---GHIKLTDFGLSKESIDHEKKAYSFCGTVEYMAP  195 (304)
T ss_dssp             CCCCHHHHHHHHHHHHHHH--HHHHHTTCCCSSCCGGGEEECTT---SCEEEESSEEEEC-----CCCCSCCCCGGGCCH
T ss_pred             CCCCHHHHHHHHHHHHHHH--HHHHHCCCcCCCCCHHHeEEcCC---CCEEecccccceeccCCCccccccccCcccCCH
Confidence            3456 58999999999999  99999999999999999999885   7899999999987543 3344678999999998

>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}

Probab=99.84  E-value=2e-21  Score=118.91  Aligned_cols=73  Identities=21%  Similarity=0.407  Sum_probs=61.5

Q ss_pred             hhcH-HHHHHHHHHHHHHHHHHHhhhCC--ceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCcccccccccccccc
Q psy8010          10 ARIP-RLVAKVTVTLLGSLNHHFTSTHS--LYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDVDVREILGTPDYVG   86 (87)
Q Consensus        10 ~~~~-~~~~~~~~q~~~~l~~~~~h~~~--~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~~~~~~~gt~~y~a   86 (87)
                      +.++ +.+..++.|++.|+  .|+|+++  ++|||+||+||+++..  ++.+|++|||+|+.. ......+.+|||.|||
T Consensus       124 ~~l~~~~~~~~~~qi~~aL--~ylH~~~~~IiHRDlKp~NILl~~~--~g~vKl~DFGla~~~-~~~~~~~~~GTp~YmA  198 (290)
T 3fpq_A          124 KVMKIKVLRSWCRQILKGL--QFLHTRTPPIIHRDLKCDNIFITGP--TGSVKIGDLGLATLK-RASFAKAVIGTPEFMA  198 (290)
T ss_dssp             SSCCHHHHHHHHHHHHHHH--HHHHTSSSCCCCCCCCGGGEEESST--TSCEEECCTTGGGGC-CTTSBEESCSSCCCCC
T ss_pred             CCCCHHHHHHHHHHHHHHH--HHHHHCCCCEEecccChhheeEECC--CCCEEEEeCcCCEeC-CCCccCCcccCccccC
Confidence            3455 57899999999999  9999998  9999999999999753  368999999999753 3334567799999999


Q ss_pred             C
Q psy8010          87 E   87 (87)
Q Consensus        87 P   87 (87)
                      |
T Consensus       199 P  199 (290)
T 3fpq_A          199 P  199 (290)
T ss_dssp             G
T ss_pred             H
Confidence            8

>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*

Probab=99.84  E-value=2.8e-21  Score=120.22  Aligned_cols=74  Identities=22%  Similarity=0.262  Sum_probs=60.0

Q ss_pred             hhcH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCcc------cccccccc
Q psy8010          10 ARIP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDVD------VREILGTP   82 (87)
Q Consensus        10 ~~~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~~------~~~~~gt~   82 (87)
                      +.++ +++..++.|++.||  .|+|+++++|||+||+||+++.++  ..+|++|||+|+.+..+..      ....+||+
T Consensus       145 ~~l~e~~~~~~~~qi~~aL--~ylH~~~IiHRDlKp~NILl~~~g--~~vKl~DFGla~~~~~~~~~~~~~~~~~~~GT~  220 (336)
T 4g3f_A          145 GCLPEDRALYYLGQALEGL--EYLHTRRILHGDVKADNVLLSSDG--SRAALCDFGHALCLQPDGLGKSLLTGDYIPGTE  220 (336)
T ss_dssp             SSCCHHHHHHHHHHHHHHH--HHHHTTTEECSCCCGGGEEECTTS--CCEEECCCTTCEEC------------CCCCCCG
T ss_pred             CCCCHHHHHHHHHHHHHHH--HHHHHCCceecccCHHHEEEeCCC--CEEEEeeCCCCeEccCCCcccceecCCccccCc
Confidence            4566 58999999999999  999999999999999999998752  3699999999998744321      13468999


Q ss_pred             ccccC
Q psy8010          83 DYVGE   87 (87)
Q Consensus        83 ~y~aP   87 (87)
                      .||||
T Consensus       221 ~YmAP  225 (336)
T 4g3f_A          221 THMAP  225 (336)
T ss_dssp             GGCCH
T ss_pred             cccCH
Confidence            99998

>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*

Probab=99.84  E-value=4.2e-21  Score=120.26  Aligned_cols=78  Identities=17%  Similarity=0.298  Sum_probs=62.8

Q ss_pred             HHHhhhcH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCc-----------
Q psy8010           6 ITLVARIP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDV-----------   73 (87)
Q Consensus         6 ~~~~~~~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~-----------   73 (87)
                      .+..+.++ ++++.++.|++.|+  .|+|++|++|||+||+|++++.+  ...+|++|||+|+...+..           
T Consensus       108 ~~~~~~l~~~~~~~~~~qll~al--~ylH~~gIiHRDiKPeNiLl~~~--~~~~kl~DFGla~~~~~~~~~~~~~~~~~~  183 (361)
T 4f9c_A          108 LDILNSLSFQEVREYMLNLFKAL--KRIHQFGIVHRDVKPSNFLYNRR--LKKYALVDFGLAQGTHDTKIELLKFVQSEA  183 (361)
T ss_dssp             HHHHTTCCHHHHHHHHHHHHHHH--HHHHHTTEECSCCSGGGEEEETT--TTEEEECCCTTCEECTTCSCGGGGGC----
T ss_pred             HHHHcCCCHHHHHHHHHHHHHHH--HHHHHCCeEeCcCCHHHeEEeCC--CCeEEECcCCCCcccCCccccccccccccc
Confidence            44556677 58999999999999  99999999999999999999875  3689999999998653221           


Q ss_pred             ------------------cccccccccccccC
Q psy8010          74 ------------------DVREILGTPDYVGE   87 (87)
Q Consensus        74 ------------------~~~~~~gt~~y~aP   87 (87)
                                        ...+.+||++||||
T Consensus       184 ~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~AP  215 (361)
T 4f9c_A          184 QQERCSQNKCSICLSRRQQVAPRAGTPGFRAP  215 (361)
T ss_dssp             ----------------------CCCCGGGCCH
T ss_pred             cccccccccccccccccccccccccCccccCH
Confidence                              12456899999998

>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}

Probab=99.84  E-value=1.4e-21  Score=120.37  Aligned_cols=79  Identities=14%  Similarity=0.209  Sum_probs=61.1

Q ss_pred             HHHHHhhhcH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCC---ccccccc
Q psy8010           4 FIITLVARIP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRD---VDVREIL   79 (87)
Q Consensus         4 ~~~~~~~~~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~---~~~~~~~   79 (87)
                      ++.....+++ .++..++.|++.||  .|+|+++++|||+||+|++++.+   ..+|++|||+|+.....   ......+
T Consensus       121 ~l~~~~~~l~~~~~~~i~~qia~gL--~yLH~~~IiHRDlKp~NILl~~~---~~~Ki~DFGla~~~~~~~~~~~~~~~~  195 (307)
T 3omv_A          121 HLHVQETKFQMFQLIDIARQTAQGM--DYLHAKNIIHRDMKSNNIFLHEG---LTVKIGDFGLATVKSRWSGSQQVEQPT  195 (307)
T ss_dssp             HHHTSCCCCCHHHHHHHHHHHHHHH--HHHHHTTCBCSCCCSSSEEEETT---EEEEECCCSSCBC------------CC
T ss_pred             HHhhcCCCCCHHHHHHHHHHHHHHH--HHHHHCCccCCccCHHHEEECCC---CcEEEeeccCceecccCCcceeecccc
Confidence            3333334566 58899999999999  99999999999999999999985   78999999999865432   2335679


Q ss_pred             cccccccC
Q psy8010          80 GTPDYVGE   87 (87)
Q Consensus        80 gt~~y~aP   87 (87)
                      ||+.||||
T Consensus       196 GT~~ymAP  203 (307)
T 3omv_A          196 GSVLWMAP  203 (307)
T ss_dssp             CCTTSCCH
T ss_pred             cCCCccCH
Confidence            99999998

>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*

Probab=99.83  E-value=8.9e-22  Score=122.99  Aligned_cols=71  Identities=28%  Similarity=0.434  Sum_probs=61.7

Q ss_pred             cH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCcc-ccccccccccccC
Q psy8010          12 IP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDVD-VREILGTPDYVGE   87 (87)
Q Consensus        12 ~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~~-~~~~~gt~~y~aP   87 (87)
                      ++ .++..++.|++.|+  .|+|+++|+|||+||+||+++.+   +.+|++|||+|+.+..... ..+.+||+.||||
T Consensus       122 ~~e~~~~~~~~qi~~aL--~ylH~~~IiHRDlKp~NILl~~~---g~vKl~DFGla~~~~~~~~~~~~~~GT~~YmAP  194 (350)
T 4b9d_A          122 FQEDQILDWFVQICLAL--KHVHDRKILHRDIKSQNIFLTKD---GTVQLGDFGIARVLNSTVELARACIGTPYYLSP  194 (350)
T ss_dssp             CCHHHHHHHHHHHHHHH--HHHHHTTCEETTCCGGGEEECTT---CCEEECSTTEESCCCHHHHHHHHHHSCCTTCCH
T ss_pred             CCHHHHHHHHHHHHHHH--HHHHHCCeeeccCCHHHEEECCC---CCEEEcccccceeecCCcccccccCCCccccCH
Confidence            45 47899999999999  99999999999999999999885   7899999999987654332 3567999999998

>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*

Probab=99.82  E-value=5.8e-21  Score=117.13  Aligned_cols=68  Identities=21%  Similarity=0.354  Sum_probs=52.2

Q ss_pred             HHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCc-------------cccccccc
Q psy8010          15 LVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDV-------------DVREILGT   81 (87)
Q Consensus        15 ~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~-------------~~~~~~gt   81 (87)
                      .+..++.|++.|+  .|+|+++++|||+||+||+++.+   ..+|++|||+|+.+..+.             .....+||
T Consensus       119 ~~~~i~~qi~~al--~ylH~~~IiHRDlKp~NILl~~~---~~vKl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~GT  193 (299)
T 4g31_A          119 VCLHIFLQIAEAV--EFLHSKGLMHRDLKPSNIFFTMD---DVVKVGDFGLVTAMDQDEEEQTVLTPMPAYARHTGQVGT  193 (299)
T ss_dssp             HHHHHHHHHHHHH--HHHHHTTCCCCCCCGGGEEECTT---CCEEECCCCCC--------------------------CC
T ss_pred             HHHHHHHHHHHHH--HHHHHCcCccccCcHHHeEECCC---CcEEEccCccceecCCCccccccccccccccccCCcccC
Confidence            4788999999999  99999999999999999999985   789999999998764322             12346899


Q ss_pred             cccccC
Q psy8010          82 PDYVGE   87 (87)
Q Consensus        82 ~~y~aP   87 (87)
                      +.||||
T Consensus       194 ~~YmAP  199 (299)
T 4g31_A          194 KLYMSP  199 (299)
T ss_dssp             CTTSCH
T ss_pred             ccccCH
Confidence            999998

>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A

Probab=99.81  E-value=3.4e-20  Score=123.46  Aligned_cols=73  Identities=15%  Similarity=0.254  Sum_probs=64.0

Q ss_pred             hhhcH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCccccccccccccccC
Q psy8010           9 VARIP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDVDVREILGTPDYVGE   87 (87)
Q Consensus         9 ~~~~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~~~~~~~gt~~y~aP   87 (87)
                      .+.++ +.++.++.|++.|+  .|+|++||+|||+||+||+++.+   +.+|++|||+|+.+... ...+.+|||.||||
T Consensus       286 ~~~l~E~~a~~y~~qIl~aL--~yLH~~gIiHRDLKPeNILld~~---G~vKL~DFGlA~~~~~~-~~~t~~GTp~YmAP  359 (689)
T 3v5w_A          286 HGVFSEADMRFYAAEIILGL--EHMHNRFVVYRDLKPANILLDEH---GHVRISDLGLACDFSKK-KPHASVGTHGYMAP  359 (689)
T ss_dssp             HCCCCHHHHHHHHHHHHHHH--HHHHTTTEECCCCSGGGEEECTT---SCEEECCCTTCEECSSC-CCCSCCSCGGGCCH
T ss_pred             cCCCCHHHHHHHHHHHHHHH--HHHHHCCccccCCchHHeEEeCC---CCEEecccceeeecCCC-CCCCccCCcCccCH
Confidence            34566 58999999999999  99999999999999999999985   78999999999887544 34567999999998

>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}

Probab=99.81  E-value=2.2e-20  Score=118.31  Aligned_cols=72  Identities=24%  Similarity=0.401  Sum_probs=61.4

Q ss_pred             hcH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCC-----cccccccccccc
Q psy8010          11 RIP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRD-----VDVREILGTPDY   84 (87)
Q Consensus        11 ~~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~-----~~~~~~~gt~~y   84 (87)
                      .++ ++++.++.|++.|+  .|+|++|++|||+||+||+++.+   +.+|++|||+|+.+...     ....+.+||++|
T Consensus       154 ~l~~~~~~~~~~qil~al--~ylH~~~iiHRDlKP~NIl~~~~---~~~Ki~DFGla~~~~~~~~~~~~~~~~~~GT~~Y  228 (398)
T 4b99_A          154 PLTLEHVRYFLYQLLRGL--KYMHSAQVIHRDLKPSNLLVNEN---CELKIGDFGMARGLCTSPAEHQYFMTEYVATRWY  228 (398)
T ss_dssp             CCCHHHHHHHHHHHHHHH--HHHHHTTCBCCCCCGGGEEECTT---CCEEECCCTTCBCC-------CCCCCSSCCCCTT
T ss_pred             CCCHHHHHHHHHHHHHHH--HHHHHCcCcCCCcCccccccCCC---CCEEEeecceeeecccCccccccccccceeChHh
Confidence            455 58999999999999  99999999999999999999985   78999999999876332     233568999999


Q ss_pred             ccC
Q psy8010          85 VGE   87 (87)
Q Consensus        85 ~aP   87 (87)
                      |||
T Consensus       229 ~AP  231 (398)
T 4b99_A          229 RAP  231 (398)
T ss_dssp             CCH
T ss_pred             cCH
Confidence            998

>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A

Probab=99.80  E-value=2.6e-20  Score=122.21  Aligned_cols=75  Identities=19%  Similarity=0.344  Sum_probs=66.2

Q ss_pred             hhcH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCccccccccccccccC
Q psy8010          10 ARIP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDVDVREILGTPDYVGE   87 (87)
Q Consensus        10 ~~~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~~~~~~~gt~~y~aP   87 (87)
                      +.++ +++..++.|++.||  .|||+++++|||+||+|++++.+. ...+|++|||+++.+.......+.+||+.||||
T Consensus       250 ~~l~e~~~~~~~~qi~~al--~ylH~~~iiHRDlKp~Nill~~~~-~~~vKl~DFG~a~~~~~~~~~~~~~GT~~y~AP  325 (573)
T 3uto_A          250 NKMSEDEAVEYMRQVCKGL--CHMHENNYVHLDLKPENIMFTTKR-SNELKLIDFGLTAHLDPKQSVKVTTGTAEFAAP  325 (573)
T ss_dssp             SCEEHHHHHHHHHHHHHHH--HHHHHTTEECCCCCGGGEEESSSS-CCCEEECCCSSCEECCTTSEEEEECSSGGGCCH
T ss_pred             CCCCHHHHHHHHHHHHHHH--HHHHHCCeeeccCChhhccccCCC-CCCEEEeeccceeEccCCCceeeeEECccccCH
Confidence            4566 58999999999999  999999999999999999998642 367999999999998777777788999999998

>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*

Probab=99.79  E-value=8.5e-20  Score=114.17  Aligned_cols=71  Identities=17%  Similarity=0.341  Sum_probs=61.2

Q ss_pred             cH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCcc---ccccccccccccC
Q psy8010          12 IP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDVD---VREILGTPDYVGE   87 (87)
Q Consensus        12 ~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~~---~~~~~gt~~y~aP   87 (87)
                      ++ +++..++.|++.|+  .|+|+++++|||+||+|++++.+   ..+|++|||+|+.+..+..   ....+||+.||||
T Consensus       182 l~~~~~~~~~~qia~gl--~yLH~~~iiHRDLK~~NILl~~~---~~vKi~DFGlar~~~~~~~~~~~~~~~gt~~ymAP  256 (353)
T 4ase_A          182 LTLEHLICYSFQVAKGM--EFLASRKCIHRDLAARNILLSEK---NVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAP  256 (353)
T ss_dssp             BCHHHHHHHHHHHHHHH--HHHHHTTCCCSCCSGGGEEECGG---GCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCH
T ss_pred             CCHHHHHHHHHHHHHHH--HhHhhCCeecCccCccceeeCCC---CCEEECcchhhhhcccCCCceeeccccccccccCH
Confidence            44 57889999999999  99999999999999999999985   7899999999997644332   2456899999998

>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}

Probab=99.77  E-value=2.7e-19  Score=111.01  Aligned_cols=72  Identities=13%  Similarity=0.123  Sum_probs=54.2

Q ss_pred             hcH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCcc---cccccccccccc
Q psy8010          11 RIP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDVD---VREILGTPDYVG   86 (87)
Q Consensus        11 ~~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~~---~~~~~gt~~y~a   86 (87)
                      .++ +++..++.|++.|+  .|+|+++++|||+||+|++++.+   ..+|++|||+++.+.....   ....+||+.|||
T Consensus       154 ~l~~~~~~~i~~qia~gl--~yLH~~~iiHRDLKp~NILl~~~---~~~Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymA  228 (329)
T 4aoj_A          154 PLGLGQLLAVASQVAAGM--VYLAGLHFVHRDLATRNCLVGQG---LVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMP  228 (329)
T ss_dssp             SCCHHHHHHHHHHHHHHH--HHHHHTTCCCSCCCGGGEEEETT---TEEEECCCC----------------CCCCGGGCC
T ss_pred             CCCHHHHHHHHHHHHHHH--HHHhcCCeecccccHhhEEECCC---CcEEEcccccceeccCCCcceecCcccccccccC
Confidence            355 57899999999999  99999999999999999999985   7899999999987643322   234689999999


Q ss_pred             C
Q psy8010          87 E   87 (87)
Q Consensus        87 P   87 (87)
                      |
T Consensus       229 P  229 (329)
T 4aoj_A          229 P  229 (329)
T ss_dssp             H
T ss_pred             h
Confidence            8

>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*

Probab=99.76  E-value=1.8e-19  Score=110.57  Aligned_cols=72  Identities=11%  Similarity=0.181  Sum_probs=61.0

Q ss_pred             hcH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCccc---ccccccccccc
Q psy8010          11 RIP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDVDV---REILGTPDYVG   86 (87)
Q Consensus        11 ~~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~~~---~~~~gt~~y~a   86 (87)
                      .++ +++..++.|++.|+  .|+|+++++|||+||+|++++.+   ..+|++|||+|+........   ....||+.|||
T Consensus       124 ~l~~~~~~~i~~qia~gl--~yLH~~~iiHRDlKp~NILl~~~---~~~Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymA  198 (299)
T 4asz_A          124 ELTQSQMLHIAQQIAAGM--VYLASQHFVHRDLATRNCLVGEN---LLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMP  198 (299)
T ss_dssp             CCCHHHHHHHHHHHHHHH--HHHHHTTCCCSCCSGGGEEECGG---GCEEECCCSCHHHHTGGGCEEETTTEEECGGGCC
T ss_pred             CCCHHHHHHHHHHHHHHH--HHHHhCCcccCccCHhhEEECCC---CcEEECCcccceecCCCCceeecCceecChhhcC
Confidence            355 57899999999999  99999999999999999999985   78999999999876443322   34579999999


Q ss_pred             C
Q psy8010          87 E   87 (87)
Q Consensus        87 P   87 (87)
                      |
T Consensus       199 P  199 (299)
T 4asz_A          199 P  199 (299)
T ss_dssp             H
T ss_pred             H
Confidence            8

>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A

Probab=99.76  E-value=5.6e-19  Score=108.76  Aligned_cols=71  Identities=13%  Similarity=0.228  Sum_probs=60.6

Q ss_pred             cH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCc---cccccccccccccC
Q psy8010          12 IP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDV---DVREILGTPDYVGE   87 (87)
Q Consensus        12 ~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~---~~~~~~gt~~y~aP   87 (87)
                      ++ .++..++.|++.|+  .|+|+++++|||+||+|++++.+   ..+|++|||+++.+....   .....+||+.||||
T Consensus       142 l~~~~~~~i~~qia~gl--~yLH~~~iiHRDLK~~NILl~~~---~~~Ki~DFGlar~~~~~~~~~~~~~~~gt~~ymAP  216 (308)
T 4gt4_A          142 LEPPDFVHLVAQIAAGM--EYLSSHHVVHKDLATRNVLVYDK---LNVKISDLGLFREVYAADYYKLLGNSLLPIRWMAP  216 (308)
T ss_dssp             CCHHHHHHHHHHHHHHH--HHHHHTTCCCSCCSGGGEEECGG---GCEEECCSCCBCGGGGGGCBCSSSSSCBCGGGCCH
T ss_pred             CCHHHHHHHHHHHHHHH--HHHHhCCCCCCCccccceEECCC---CCEEECCcccceeccCCCceeEecccccCCcccCH
Confidence            44 47889999999999  99999999999999999999985   789999999998764332   22456899999998

>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*

Probab=99.76  E-value=2.3e-19  Score=117.72  Aligned_cols=66  Identities=18%  Similarity=0.207  Sum_probs=56.6

Q ss_pred             HHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCC-ccccccccccccccC
Q psy8010          17 AKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRD-VDVREILGTPDYVGE   87 (87)
Q Consensus        17 ~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~-~~~~~~~gt~~y~aP   87 (87)
                      ..++.|++.||  .|+|++||+|||+||+||+++.+   +.+||+|||+++....+ ....+.+||+.||||
T Consensus       342 ~~I~~QIl~AL--~ylH~~GIIHRDIKPeNILL~~d---g~vKL~DFGlAr~~~~~~~~~~t~vGTp~YmAP  408 (569)
T 4azs_A          342 EKILGSLLRSL--AALEKQGFWHDDVRPWNVMVDAR---QHARLIDFGSIVTTPQDCSWPTNLVQSFFVFVN  408 (569)
T ss_dssp             HHHHHHHHHHH--HHHHHTTCEESCCCGGGEEECTT---SCEEECCCTTEESCC---CCSHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHH--HHHHHCCceeccCchHhEEECCC---CCEEEeecccCeeCCCCCccccCceechhhccH
Confidence            45889999999  99999999999999999999875   78999999999876543 334567999999987

>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*

Probab=99.75  E-value=1e-18  Score=107.27  Aligned_cols=69  Identities=13%  Similarity=0.237  Sum_probs=56.4

Q ss_pred             HHHHHHHHHHHHHHHHHHhhhC--------CceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCcc-----cccccc
Q psy8010          14 RLVAKVTVTLLGSLNHHFTSTH--------SLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDVD-----VREILG   80 (87)
Q Consensus        14 ~~~~~~~~q~~~~l~~~~~h~~--------~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~~-----~~~~~g   80 (87)
                      +....++.|++.|+  .|+|++        +++|||+||+|++++.+   ..+|++|||+++.......     ....+|
T Consensus       100 ~~~~~i~~~ia~gl--~ylH~~~~~~~~~~~IiHRDlKp~NILl~~~---~~~Ki~DFGla~~~~~~~~~~~~~~~~~~G  174 (303)
T 3hmm_A          100 EGMIKLALSTASGL--AHLHMEIVGTQGKPAIAHRDLKSKNILVKKN---GTCCIADLGLAVRHDSATDTIDIAPNHRVG  174 (303)
T ss_dssp             HHHHHHHHHHHHHH--HHHHCCBCSTTCBCCEECSCCCGGGEEECTT---SCEEECCCTTCEEEETTTTEESCC-----C
T ss_pred             HHHHHHHHHHHHHH--HHHHHhhhhccCCCCEeeccCCcccEEECCC---CCEEEEeCCCCccccCCCCceeeecccccc
Confidence            57888999999999  999987        99999999999999885   7899999999987643322     134689


Q ss_pred             ccccccC
Q psy8010          81 TPDYVGE   87 (87)
Q Consensus        81 t~~y~aP   87 (87)
                      |+.||||
T Consensus       175 T~~ymAP  181 (303)
T 3hmm_A          175 TKRYMAP  181 (303)
T ss_dssp             CGGGCCH
T ss_pred             cccccCH
Confidence            9999998

>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*

Probab=99.71  E-value=7.6e-18  Score=107.68  Aligned_cols=78  Identities=21%  Similarity=0.376  Sum_probs=64.7

Q ss_pred             HHHHhhhcH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCccc--cccccc
Q psy8010           5 IITLVARIP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDVDV--REILGT   81 (87)
Q Consensus         5 ~~~~~~~~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~~~--~~~~gt   81 (87)
                      +....+.++ +.+..++.|++.|+  .|+|+++++|+|+||+||+++.+   ..+|++|||+++........  ...+||
T Consensus       165 l~~~~~~l~e~~~~~~~~qi~~aL--~~LH~~giiHrDLKp~NILl~~~---g~vkL~DFGla~~~~~~~~~~~~~~~GT  239 (437)
T 4aw2_A          165 LSKFEDRLPEEMARFYLAEMVIAI--DSVHQLHYVHRDIKPDNILMDMN---GHIRLADFGSCLKLMEDGTVQSSVAVGT  239 (437)
T ss_dssp             HHTTTTCCCHHHHHHHHHHHHHHH--HHHHHTTEECCCCSGGGEEECTT---SCEEECCCTTCEECCTTSCEECCSCCSC
T ss_pred             HHHccCCCCHHHHHHHHHHHHHHH--HHHHhCCeEecccCHHHeeEcCC---CCEEEcchhhhhhcccCCCcccccccCC
Confidence            333344566 57899999999999  99999999999999999999885   78999999999876544332  446899


Q ss_pred             cccccC
Q psy8010          82 PDYVGE   87 (87)
Q Consensus        82 ~~y~aP   87 (87)
                      +.|+||
T Consensus       240 ~~Y~AP  245 (437)
T 4aw2_A          240 PDYISP  245 (437)
T ss_dssp             GGGCCH
T ss_pred             cCeeCh
Confidence            999998

>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A

Probab=99.70  E-value=1.8e-17  Score=102.43  Aligned_cols=73  Identities=16%  Similarity=0.397  Sum_probs=64.6

Q ss_pred             hhcH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCccccccccccccccC
Q psy8010          10 ARIP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDVDVREILGTPDYVGE   87 (87)
Q Consensus        10 ~~~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~~~~~~~gt~~y~aP   87 (87)
                      ++++ +++..++.|++.++  .|+|+++++|+|++|+|++++.+   ..+|++|||++.....+......+||+.|+||
T Consensus       109 ~~l~~~~~~~~~~qi~~al--~~lH~~~ivHrDlkp~NIll~~~---~~~kl~DFG~a~~~~~~~~~~~~~gt~~y~aP  182 (328)
T 3fe3_A          109 GRMKEKEARSKFRQIVSAV--QYCHQKRIVHRDLKAENLLLDAD---MNIKIADFGFSNEFTVGGKLDAFCGAPPYAAP  182 (328)
T ss_dssp             CCCCHHHHHHHHHHHHHHH--HHHHHTTCCCSCCCGGGEEECTT---SCEEECSTTCCGGGSSSCGGGTTSSSGGGCCH
T ss_pred             CCCCHHHHHHHHHHHHHHH--HHHHHCCEeccCCCHHHEEEcCC---CCEEEeeccCceecCCCCccccccCCcceeCc
Confidence            3455 58899999999999  99999999999999999999885   78999999999877666666778999999998

>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}

Probab=99.70  E-value=2e-17  Score=105.06  Aligned_cols=79  Identities=23%  Similarity=0.373  Sum_probs=65.1

Q ss_pred             HHHHHhhhcH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCccc--ccccc
Q psy8010           4 FIITLVARIP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDVDV--REILG   80 (87)
Q Consensus         4 ~~~~~~~~~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~~~--~~~~g   80 (87)
                      ++......++ +.+..++.|++.|+  .|+|+++++|+|+||+||+++.+   ..+|++|||+++........  ...+|
T Consensus       151 ~l~~~~~~l~~~~~~~~~~qi~~aL--~~LH~~giiHrDLKp~NILld~~---g~vkL~DFGla~~~~~~~~~~~~~~~G  225 (412)
T 2vd5_A          151 LLSKFGERIPAEMARFYLAEIVMAI--DSVHRLGYVHRDIKPDNILLDRC---GHIRLADFGSCLKLRADGTVRSLVAVG  225 (412)
T ss_dssp             HHHHHSSCCCHHHHHHHHHHHHHHH--HHHHHTTEECCCCSGGGEEECTT---SCEEECCCTTCEECCTTSCEECSSCCS
T ss_pred             HHHhcCCCCCHHHHHHHHHHHHHHH--HHHHHCCeeecccCHHHeeecCC---CCEEEeechhheeccCCCccccceecc
Confidence            3443334566 57899999999999  99999999999999999999885   78999999999887544332  35699


Q ss_pred             ccccccC
Q psy8010          81 TPDYVGE   87 (87)
Q Consensus        81 t~~y~aP   87 (87)
                      |+.|+||
T Consensus       226 t~~Y~AP  232 (412)
T 2vd5_A          226 TPDYLSP  232 (412)
T ss_dssp             CGGGCCH
T ss_pred             ccCcCCH
Confidence            9999998

>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}

Probab=99.70  E-value=2.7e-17  Score=104.09  Aligned_cols=73  Identities=18%  Similarity=0.348  Sum_probs=63.3

Q ss_pred             hhcH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceec-CCCccccccccccccccC
Q psy8010          10 ARIP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHL-SRDVDVREILGTPDYVGE   87 (87)
Q Consensus        10 ~~~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~-~~~~~~~~~~gt~~y~aP   87 (87)
                      +.++ +.+..++.|++.|+  .|+|+++++|+|+||+|++++.+   +.+|++|||+++.. .......+.+||+.|+||
T Consensus       148 ~~l~~~~~~~~~~qi~~aL--~~LH~~givHrDLKp~NILl~~~---g~ikL~DFGla~~~~~~~~~~~~~~gt~~Y~aP  222 (396)
T 4dc2_A          148 RKLPEEHARFYSAEISLAL--NYLHERGIIYRDLKLDNVLLDSE---GHIKLTDYGMCKEGLRPGDTTSTFCGTPNYIAP  222 (396)
T ss_dssp             SSCCHHHHHHHHHHHHHHH--HHHHHTTCBCCCCCGGGEEECTT---SCEEECCCTTCBCCCCTTCCBCCCCBCGGGCCH
T ss_pred             CCCCHHHHHHHHHHHHHHH--HHHHHCCEEeccCCHHHEEECCC---CCEEEeecceeeecccCCCccccccCCcccCCc
Confidence            3455 58899999999999  99999999999999999999885   78999999999863 344455678999999998

>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}

Probab=99.69  E-value=4e-17  Score=102.92  Aligned_cols=72  Identities=21%  Similarity=0.407  Sum_probs=64.7

Q ss_pred             hcH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCccccccccccccccC
Q psy8010          11 RIP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDVDVREILGTPDYVGE   87 (87)
Q Consensus        11 ~~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~~~~~~~gt~~y~aP   87 (87)
                      .++ +.+..++.|++.|+  .|+|++|++|+|++|+||+++.+   +.++++|||++..+.........+||+.|+||
T Consensus       111 ~l~~~~~~~~~~qi~~aL--~~LH~~givHrDlkp~NIll~~~---g~vkL~DFG~a~~~~~~~~~~~~~gt~~Y~aP  183 (384)
T 4fr4_A          111 HFKEETVKLFICELVMAL--DYLQNQRIIHRDMKPDNILLDEH---GHVHITDFNIAAMLPRETQITTMAGTKPYMAP  183 (384)
T ss_dssp             CCCHHHHHHHHHHHHHHH--HHHHHTTEECCCCSGGGEEECTT---SCEEECCCTTCEECCTTCCBCCCCSCGGGCCG
T ss_pred             CCCHHHHHHHHHHHHHHH--HHHHHCCceeccCcHHHeEECCC---CCEEEeccceeeeccCCCceeccCCCccccCC
Confidence            455 57899999999999  99999999999999999999885   78999999999987766666788999999998

>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*

Probab=99.69  E-value=1.9e-17  Score=106.28  Aligned_cols=73  Identities=16%  Similarity=0.339  Sum_probs=57.3

Q ss_pred             hhcH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCccccccccccccccC
Q psy8010          10 ARIP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDVDVREILGTPDYVGE   87 (87)
Q Consensus        10 ~~~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~~~~~~~gt~~y~aP   87 (87)
                      ..++ +.+..++.|++.|+  .|+|+++++|+|+||+||+++.+   ..+|++|||+++...........+||++|+||
T Consensus       159 ~~l~~~~~~~~~~qil~aL--~~lH~~~iiHrDlkp~NIll~~~---~~~kl~DFG~a~~~~~~~~~~~~~gt~~y~aP  232 (464)
T 3ttj_A          159 MELDHERMSYLLYQMLCGI--KHLHSAGIIHRDLKPSNIVVKSD---CTLKILDFGLARTAGTSFMMTPYVVTRYYRAP  232 (464)
T ss_dssp             SCCCHHHHHHHHHHHHHHH--HHHHHTTCCCCCCCGGGEEECTT---SCEEECCCCCC-----CCCC----CCCTTCCH
T ss_pred             hcCCHHHHHHHHHHHHHHH--HHHHHCCcccCCCChHhEEEeCC---CCEEEEEEEeeeecCCCcccCCCcccccccCH
Confidence            3455 57889999999999  99999999999999999999985   78999999999877655556678999999998

>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}

Probab=99.69  E-value=3.3e-17  Score=100.18  Aligned_cols=77  Identities=23%  Similarity=0.225  Sum_probs=61.7

Q ss_pred             HHHhhhcH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCcccccccccccc
Q psy8010           6 ITLVARIP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDVDVREILGTPDY   84 (87)
Q Consensus         6 ~~~~~~~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~~~~~~~gt~~y   84 (87)
                      ......++ +.+..++.|++.++  .|+|+.+++|+|+||+||+++.+   ..+|++|||++.............||+.|
T Consensus       148 ~~~~~~l~~~~~~~i~~qi~~aL--~~LH~~~ivH~Dikp~NIll~~~---~~~kl~DFG~a~~~~~~~~~~~~~gt~~y  222 (311)
T 3p1a_A          148 EAWGASLPEAQVWGYLRDTLLAL--AHLHSQGLVHLDVKPANIFLGPR---GRCKLGDFGLLVELGTAGAGEVQEGDPRY  222 (311)
T ss_dssp             HHHCSCCCHHHHHHHHHHHHHHH--HHHHHTTEECCCCSGGGEEECGG---GCEEECCCTTCEECC------CCCCCGGG
T ss_pred             HhcCCCCCHHHHHHHHHHHHHHH--HHHHHCCEecCCCCHHHEEECCC---CCEEEccceeeeecccCCCCcccCCCccc
Confidence            33334466 57899999999999  99999999999999999999885   78999999999887655555666899999


Q ss_pred             ccC
Q psy8010          85 VGE   87 (87)
Q Consensus        85 ~aP   87 (87)
                      +||
T Consensus       223 ~aP  225 (311)
T 3p1a_A          223 MAP  225 (311)
T ss_dssp             CCG
T ss_pred             cCH
Confidence            998

>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}

Probab=99.69  E-value=3.5e-17  Score=102.04  Aligned_cols=73  Identities=23%  Similarity=0.371  Sum_probs=57.4

Q ss_pred             hhcH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecC-CCccccccccccccccC
Q psy8010          10 ARIP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLS-RDVDVREILGTPDYVGE   87 (87)
Q Consensus        10 ~~~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~-~~~~~~~~~gt~~y~aP   87 (87)
                      +.++ +.+..++.|++.|+  .|+|+++++|+|+||+||+++.+   +.+|++|||+++... ........+||+.|+||
T Consensus       119 ~~~~~~~~~~~~~qi~~aL--~~LH~~givHrDlkp~NILl~~~---g~ikL~DFG~a~~~~~~~~~~~~~~gt~~y~aP  193 (353)
T 3txo_A          119 RRFDEARARFYAAEIISAL--MFLHDKGIIYRDLKLDNVLLDHE---GHCKLADFGMCKEGICNGVTTATFCGTPDYIAP  193 (353)
T ss_dssp             SSCCHHHHHHHHHHHHHHH--HHHHHTTCBCCCCCGGGEEECTT---SCEEECCCTTCBCSCC---------CCGGGCCH
T ss_pred             CCCCHHHHHHHHHHHHHHH--HHHHHCCCcccCCCHHHEEECCC---CCEEEccccceeecccCCccccccCCCcCeECh
Confidence            3455 58899999999999  99999999999999999999885   789999999998643 33344667999999998

>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}

Probab=99.69  E-value=2.4e-17  Score=102.51  Aligned_cols=75  Identities=16%  Similarity=0.231  Sum_probs=61.1

Q ss_pred             hcH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeee--------CCCCCcEEEEeeccceecC---CCcccccc
Q psy8010          11 RIP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTG--------EYPDCDVKLCDFGISRHLS---RDVDVREI   78 (87)
Q Consensus        11 ~~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~--------~~~~~~~kl~dfg~~~~~~---~~~~~~~~   78 (87)
                      .++ +.+..++.|++.|+  .|+|+++++|+|+||+||+++.        .+....+|++|||+++.+.   ........
T Consensus       168 ~l~~~~~~~i~~qi~~~L--~~lH~~~ivHrDiKp~NIll~~~~~~~~~~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~~  245 (365)
T 3e7e_A          168 VMPQGLVISFAMRMLYMI--EQVHDCEIIHGDIKPDNFILGNGFLEQDDEDDLSAGLALIDLGQSIDMKLFPKGTIFTAK  245 (365)
T ss_dssp             SCCHHHHHHHHHHHHHHH--HHHHTTTEECCCCSGGGEEECGGGTCC------CTTEEECCCTTCEEGGGSCTTEEECCS
T ss_pred             CCCHHHHHHHHHHHHHHH--HHHhhCCeecCCCCHHHEEecccccCccccccccCCEEEeeCchhhhhhccCCCceeeee
Confidence            355 57999999999999  9999999999999999999987        1113789999999997653   23344567


Q ss_pred             ccccccccC
Q psy8010          79 LGTPDYVGE   87 (87)
Q Consensus        79 ~gt~~y~aP   87 (87)
                      +||+.||||
T Consensus       246 ~gt~~y~aP  254 (365)
T 3e7e_A          246 CETSGFQCV  254 (365)
T ss_dssp             SCTTSCCCH
T ss_pred             cCCCCCCCh
Confidence            899999998

>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A

Probab=99.68  E-value=7.8e-17  Score=107.38  Aligned_cols=73  Identities=22%  Similarity=0.384  Sum_probs=63.3

Q ss_pred             hhcH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecC-CCccccccccccccccC
Q psy8010          10 ARIP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLS-RDVDVREILGTPDYVGE   87 (87)
Q Consensus        10 ~~~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~-~~~~~~~~~gt~~y~aP   87 (87)
                      ++++ +.+..++.|++.|+  .|+|+++++|+|+||+||+++.+   ..+||+|||+++... .+....+.+||+.|+||
T Consensus       437 ~~~~~~~~~~~~~qi~~aL--~~LH~~gIiHrDLKp~NILl~~~---g~ikL~DFGla~~~~~~~~~~~~~~GT~~Y~AP  511 (674)
T 3pfq_A          437 GRFKEPHAVFYAAEIAIGL--FFLQSKGIIYRDLKLDNVMLDSE---GHIKIADFGMCKENIWDGVTTKTFCGTPDYIAP  511 (674)
T ss_dssp             SSCCHHHHHHHHHHHHHHH--HHHHHTSEECCCCCSTTEEECSS---SCEEECCCTTCEECCCTTCCBCCCCSCSSSCCH
T ss_pred             CCCCHHHHHHHHHHHHHHH--HHHHhCCeEeccCChhhEEEcCC---CcEEEeecceeeccccCCcccccccCCCcccCH
Confidence            4456 58899999999999  99999999999999999999885   789999999998643 34455678999999998

>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A

Probab=99.68  E-value=5.4e-17  Score=101.01  Aligned_cols=81  Identities=19%  Similarity=0.250  Sum_probs=63.3

Q ss_pred             HHHHHhhhcH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCccc-------
Q psy8010           4 FIITLVARIP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDVDV-------   75 (87)
Q Consensus         4 ~~~~~~~~~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~~~-------   75 (87)
                      ++......++ +.+..++.|++.++  .|+|+++++|+|+||+||+++... ...+|++|||+++.+......       
T Consensus       141 ~~~~~~~~l~~~~~~~i~~qi~~~l--~~lH~~~iiHrDlkp~Nill~~~~-~~~~kl~DFG~a~~~~~~~~~~~~~~~~  217 (364)
T 3op5_A          141 IYEANAKRFSRKTVLQLSLRILDIL--EYIHEHEYVHGDIKASNLLLNYKN-PDQVYLVDYGLAYRYCPEGVHKAYAADP  217 (364)
T ss_dssp             HHHHTTSCCCHHHHHHHHHHHHHHH--HHHHHTTEECCCCCGGGEEEESSC-TTCEEECCCTTCEESSGGGCCCCSSCCS
T ss_pred             HHHhccCCCCHHHHHHHHHHHHHHH--HHHHHCCeEEecCCHHHEEEecCC-CCeEEEEECCcceecccCCcccccccCc
Confidence            3333334566 58999999999999  999999999999999999998321 378999999999876433221       


Q ss_pred             -cccccccccccC
Q psy8010          76 -REILGTPDYVGE   87 (87)
Q Consensus        76 -~~~~gt~~y~aP   87 (87)
                       ...+||+.|+||
T Consensus       218 ~~~~~gt~~y~aP  230 (364)
T 3op5_A          218 KRCHDGTIEFTSI  230 (364)
T ss_dssp             SCCCCCCTTTCCH
T ss_pred             ccccCCCCCccCH
Confidence             334699999997

>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...

Probab=99.68  E-value=8.8e-17  Score=99.72  Aligned_cols=72  Identities=17%  Similarity=0.350  Sum_probs=62.2

Q ss_pred             hcH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecC-CCccccccccccccccC
Q psy8010          11 RIP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLS-RDVDVREILGTPDYVGE   87 (87)
Q Consensus        11 ~~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~-~~~~~~~~~gt~~y~aP   87 (87)
                      .++ +.+..++.|++.++  .|+|+++++|+|+||+|++++.+   +.+|++|||+++... .+......+||+.|+||
T Consensus       101 ~~~~~~~~~~~~qi~~aL--~~LH~~~ivHrDlkp~NIll~~~---g~vkL~DFG~a~~~~~~~~~~~~~~gt~~y~aP  174 (337)
T 1o6l_A          101 VFTEERARFYGAEIVSAL--EYLHSRDVVYRDIKLENLMLDKD---GHIKITDFGLCKEGISDGATMKTFCGTPEYLAP  174 (337)
T ss_dssp             CCCHHHHHHHHHHHHHHH--HHHHHTTCBCCCCCGGGEEECTT---SCEEECCCTTCBCSCCTTCCBCCCEECGGGCCG
T ss_pred             CCCHHHHHHHHHHHHHHH--HHHHHCCeecCcCCHHHEEECCC---CCEEEeeccchhhcccCCCcccccccChhhCCh
Confidence            455 57899999999999  99999999999999999999885   789999999998643 33445678999999998

>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}

Probab=99.68  E-value=7.4e-17  Score=100.07  Aligned_cols=72  Identities=21%  Similarity=0.446  Sum_probs=64.3

Q ss_pred             hcH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCccccccccccccccC
Q psy8010          11 RIP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDVDVREILGTPDYVGE   87 (87)
Q Consensus        11 ~~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~~~~~~~gt~~y~aP   87 (87)
                      +++ +++..++.|++.++  .|+|++|++|+|++|+|++++.+   ..+|++|||++.....+......+||+.|+||
T Consensus       104 ~l~~~~~~~i~~qi~~aL--~~LH~~givH~Dlkp~NIll~~~---~~~kl~DFG~s~~~~~~~~~~~~~gt~~y~aP  176 (336)
T 3h4j_B          104 RMTEDEGRRFFQQIICAI--EYCHRHKIVHRDLKPENLLLDDN---LNVKIADFGLSNIMTDGNFLKTSCGSPNYAAP  176 (336)
T ss_dssp             SCCHHHHHHHHHHHHHHH--HHHHHHTCCCCCCSTTTEEECTT---CCEEECCSSCTBTTTTSBTTCCCTTSTTTSCG
T ss_pred             CCCHHHHHHHHHHHHHHH--HHHHHCCeEecCCchhhEEEcCC---CCEEEEEeccceeccCCcccccccCCcCcCCH
Confidence            455 58899999999999  99999999999999999999975   78999999999877666666778999999998

>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A

Probab=99.68  E-value=5.2e-17  Score=100.03  Aligned_cols=70  Identities=14%  Similarity=0.075  Sum_probs=59.2

Q ss_pred             cH-HHHHHHHHHHHHHHHHHHhh-hCCceecCCCCCceEeeeCCC-----------------CCcEEEEeeccceecCCC
Q psy8010          12 IP-RLVAKVTVTLLGSLNHHFTS-THSLYRSCSQPQNLVLTGEYP-----------------DCDVKLCDFGISRHLSRD   72 (87)
Q Consensus        12 ~~-~~~~~~~~q~~~~l~~~~~h-~~~~~h~~~~~~~~l~~~~~~-----------------~~~~kl~dfg~~~~~~~~   72 (87)
                      ++ +.+..++.|++.|+  .|+| +++++|||+||+||+++.++.                 ...+|++|||+++.....
T Consensus       158 ~~~~~~~~i~~qi~~aL--~~lH~~~~ivHrDlKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~vkL~DFG~a~~~~~~  235 (336)
T 2vuw_A          158 SSLATAKSILHQLTASL--AVAEASLRFEHRDLHWGNVLLKKTSLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLERDG  235 (336)
T ss_dssp             CCHHHHHHHHHHHHHHH--HHHHHHHCCBCSCCCGGGEEEEECSCSEEEEEETTEEEEEECTTEEEEECCCTTCBEEETT
T ss_pred             CCHHHHHHHHHHHHHHH--HHHHHhCCEeECCCCHHHEEEeccCCcceeeeccCccccccCCCceEEEeeccccEecCCC
Confidence            44 58999999999999  9999 999999999999999998521                 127999999999875432


Q ss_pred             ccccccccccccccC
Q psy8010          73 VDVREILGTPDYVGE   87 (87)
Q Consensus        73 ~~~~~~~gt~~y~aP   87 (87)
                          ..+||+.||||
T Consensus       236 ----~~~gt~~y~aP  246 (336)
T 2vuw_A          236 ----IVVFCDVSMDE  246 (336)
T ss_dssp             ----EEECCCCTTCS
T ss_pred             ----cEEEeecccCh
Confidence                45899999998

>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C

Probab=99.68  E-value=7e-17  Score=101.97  Aligned_cols=74  Identities=20%  Similarity=0.374  Sum_probs=56.6

Q ss_pred             cH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCccccccccccccccC
Q psy8010          12 IP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDVDVREILGTPDYVGE   87 (87)
Q Consensus        12 ~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~~~~~~~gt~~y~aP   87 (87)
                      ++ +.+..++.|++.++  .|+|+++++|+|+||+||+++..+++..+|++|||+++...........+||+.|+||
T Consensus       158 l~~~~~~~i~~qi~~aL--~~LH~~~ivHrDlkp~Nill~~~~~~~~~kl~DFG~a~~~~~~~~~~~~~gt~~y~aP  232 (400)
T 1nxk_A          158 FTEREASEIMKSIGEAI--QYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAP  232 (400)
T ss_dssp             CBHHHHHHHHHHHHHHH--HHHHHTTEECCCCCGGGEEESSSSTTCCEEECCCTTCEECC-----------CTTCCG
T ss_pred             CCHHHHHHHHHHHHHHH--HHHHHCCccccCcCcceEEEecCCCCccEEEEecccccccCCCCccccCCCCCCccCH
Confidence            55 58999999999999  9999999999999999999997543478999999999977655555677999999998

>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*

Probab=99.67  E-value=8.7e-17  Score=100.31  Aligned_cols=73  Identities=22%  Similarity=0.384  Sum_probs=62.6

Q ss_pred             hhcH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecC-CCccccccccccccccC
Q psy8010          10 ARIP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLS-RDVDVREILGTPDYVGE   87 (87)
Q Consensus        10 ~~~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~-~~~~~~~~~gt~~y~aP   87 (87)
                      +.++ +.+..++.|++.|+  .|+|++|++|+|+||+|++++.+   +.+|++|||+++... ........+||+.|+||
T Consensus       116 ~~~~~~~~~~~~~qi~~aL--~~LH~~givHrDlkp~NIll~~~---g~vkL~DFG~a~~~~~~~~~~~~~~gt~~y~aP  190 (353)
T 2i0e_A          116 GRFKEPHAVFYAAEIAIGL--FFLQSKGIIYRDLKLDNVMLDSE---GHIKIADFGMCKENIWDGVTTKTFCGTPDYIAP  190 (353)
T ss_dssp             SSCCHHHHHHHHHHHHHHH--HHHHHTTCBCCCCCGGGEEECTT---SCEEECCCTTCBCCCCTTCCBCCCCSCGGGCCH
T ss_pred             CCCCHHHHHHHHHHHHHHH--HHHHHCCEEeccCCHHHEEEcCC---CcEEEEeCCcccccccCCcccccccCCccccCh
Confidence            3455 58899999999999  99999999999999999999885   789999999998643 33345677999999998

>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}

Probab=99.67  E-value=5.2e-17  Score=103.63  Aligned_cols=71  Identities=20%  Similarity=0.407  Sum_probs=57.4

Q ss_pred             cH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCc-----------------
Q psy8010          12 IP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDV-----------------   73 (87)
Q Consensus        12 ~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~-----------------   73 (87)
                      ++ ..+..++.|++.|+  .|+|+++++|+|+||+||+++.+   ..+|++|||+++......                 
T Consensus       153 l~~~~~~~~~~qi~~aL--~~LH~~~iiHrDlKp~NILl~~~---~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~  227 (458)
T 3rp9_A          153 LTELHIKTLLYNLLVGV--KYVHSAGILHRDLKPANCLVNQD---CSVKVCDFGLARTVDYPENGNSQLPISPREDDMNL  227 (458)
T ss_dssp             CCHHHHHHHHHHHHHHH--HHHHHTTCBCCCCCGGGEEECTT---CCEEECCCTTCBCTTSCTTCCCCCC----------
T ss_pred             CCHHHHHHHHHHHHHHH--HHHHhCCcCCCCCChhhEEECCC---CCEeecccccchhccCccccccccccCcccccccc
Confidence            45 57899999999999  99999999999999999999985   789999999998763221                 


Q ss_pred             -----------cccccccccccccC
Q psy8010          74 -----------DVREILGTPDYVGE   87 (87)
Q Consensus        74 -----------~~~~~~gt~~y~aP   87 (87)
                                 .....+||++|+||
T Consensus       228 ~~~~~~~~~~~~~~~~~gt~~Y~aP  252 (458)
T 3rp9_A          228 VTFPHTKNLKRQLTGHVVTRWYRAP  252 (458)
T ss_dssp             -----------------CCCTTCCH
T ss_pred             ccccccccccccccCCcccccccCh
Confidence                       23456899999998

>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}

Probab=99.67  E-value=8.4e-17  Score=101.33  Aligned_cols=73  Identities=25%  Similarity=0.309  Sum_probs=63.7

Q ss_pred             hcH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCccccccccccccccC
Q psy8010          11 RIP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDVDVREILGTPDYVGE   87 (87)
Q Consensus        11 ~~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~~~~~~~gt~~y~aP   87 (87)
                      .++ ..+..++.|++.++  .|+|+++++|+|+||+|++++..  +..+|++|||+++.+..+.......||+.|+||
T Consensus       137 ~~~~~~~~~~~~qi~~aL--~~LH~~~ivHrDlkp~Nill~~~--~~~~kL~DFG~a~~~~~~~~~~~~~~t~~y~aP  210 (394)
T 4e7w_A          137 TMPMLLIKLYMYQLLRSL--AYIHSIGICHRDIKPQNLLLDPP--SGVLKLIDFGSAKILIAGEPNVSYICSRYYRAP  210 (394)
T ss_dssp             CCCHHHHHHHHHHHHHHH--HHHHHTTEECSCCSGGGEEEETT--TTEEEECCCTTCEECCTTCCCCSSCSCGGGCCH
T ss_pred             CCCHHHHHHHHHHHHHHH--HHHHHCCccCCCCCHHHEEEcCC--CCcEEEeeCCCcccccCCCCCcccccCcCccCH
Confidence            455 57899999999999  99999999999999999999843  378999999999987666666677999999998

>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...

Probab=99.67  E-value=8.3e-17  Score=102.10  Aligned_cols=73  Identities=26%  Similarity=0.417  Sum_probs=63.0

Q ss_pred             hcH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCccccccccccccccC
Q psy8010          11 RIP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDVDVREILGTPDYVGE   87 (87)
Q Consensus        11 ~~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~~~~~~~gt~~y~aP   87 (87)
                      .++ ..+..++.|++.++  .|+|+++++|+|+||+||+++.+  ...+|++|||+++.+..+......+||+.|+||
T Consensus       152 ~l~~~~~~~~~~qi~~aL--~~LH~~~ivHrDlkp~NILl~~~--~~~~kl~DFG~a~~~~~~~~~~~~~~t~~y~aP  225 (420)
T 1j1b_A          152 TLPVIYVKLYMYQLFRSL--AYIHSFGICHRDIKPQNLLLDPD--TAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAP  225 (420)
T ss_dssp             CCCHHHHHHHHHHHHHHH--HHHHTTTEECSCCSGGGEEEETT--TTEEEECCCTTCEECCTTCCCCSCCSCTTSCCH
T ss_pred             CCCHHHHHHHHHHHHHHH--HHHHHCCccccCCChhhEEEeCC--CCeEEeccchhhhhcccCCCceeeeeCCCcCCH
Confidence            344 47899999999999  99999999999999999999864  356899999999987666556677999999997

>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}

Probab=99.67  E-value=8.2e-17  Score=100.87  Aligned_cols=72  Identities=24%  Similarity=0.399  Sum_probs=58.4

Q ss_pred             hcH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCC------------------
Q psy8010          11 RIP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSR------------------   71 (87)
Q Consensus        11 ~~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~------------------   71 (87)
                      .++ ..+..++.|++.|+  .|+|+.|++|+|+||+|++++.+   ..+|++|||+++.+..                  
T Consensus       105 ~~~~~~~~~i~~qi~~~L--~~LH~~~ivHrDlkp~NIll~~~---~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~~~  179 (388)
T 3oz6_A          105 ILEPVHKQYVVYQLIKVI--KYLHSGGLLHRDMKPSNILLNAE---CHVKVADFGLSRSFVNIRRVTNNIPLSINENTEN  179 (388)
T ss_dssp             CCCHHHHHHHHHHHHHHH--HHHHHTTEECCCCCGGGEEECTT---CCEEECCCTTCEESSSCCCCCCCGGGCCC-----
T ss_pred             CCCHHHHHHHHHHHHHHH--HHHHhCCEEeCCCCHHHeEEcCC---CCEEecCCcccccccccccccccccccccccccc
Confidence            344 57888999999999  99999999999999999999885   7899999999987532                  


Q ss_pred             ----CccccccccccccccC
Q psy8010          72 ----DVDVREILGTPDYVGE   87 (87)
Q Consensus        72 ----~~~~~~~~gt~~y~aP   87 (87)
                          .......+||++|+||
T Consensus       180 ~~~~~~~~~~~~gt~~y~aP  199 (388)
T 3oz6_A          180 FDDDQPILTDYVATRWYRAP  199 (388)
T ss_dssp             ----------CCCGGGGCCH
T ss_pred             cccccccccCCcccCCcCCH
Confidence                1122456899999998

>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*

Probab=99.67  E-value=1.3e-16  Score=99.13  Aligned_cols=73  Identities=18%  Similarity=0.340  Sum_probs=62.5

Q ss_pred             hhcH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecC-CCccccccccccccccC
Q psy8010          10 ARIP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLS-RDVDVREILGTPDYVGE   87 (87)
Q Consensus        10 ~~~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~-~~~~~~~~~gt~~y~aP   87 (87)
                      +.++ +.+..++.|++.|+  .|+|+++++|+|+||+|++++.+   ..+|++|||+++... ........+||+.|+||
T Consensus       105 ~~l~~~~~~~~~~qi~~aL--~~LH~~~ivHrDlkp~NIll~~~---g~~kL~DFG~a~~~~~~~~~~~~~~gt~~y~aP  179 (345)
T 3a8x_A          105 RKLPEEHARFYSAEISLAL--NYLHERGIIYRDLKLDNVLLDSE---GHIKLTDYGMCKEGLRPGDTTSTFCGTPNYIAP  179 (345)
T ss_dssp             SSCCHHHHHHHHHHHHHHH--HHHHHTTCBCCCCCGGGEEECTT---SCEEECCGGGCBCSCCTTCCBCCCCSCGGGCCH
T ss_pred             CCCCHHHHHHHHHHHHHHH--HHHHHCCceecCCCHHHEEECCC---CCEEEEeccccccccCCCCcccccCCCccccCc
Confidence            3455 58899999999999  99999999999999999999875   789999999998643 33445677999999998

>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*

Probab=99.66  E-value=1.1e-16  Score=100.41  Aligned_cols=72  Identities=17%  Similarity=0.332  Sum_probs=61.6

Q ss_pred             hcH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecC-CCccccccccccccccC
Q psy8010          11 RIP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLS-RDVDVREILGTPDYVGE   87 (87)
Q Consensus        11 ~~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~-~~~~~~~~~gt~~y~aP   87 (87)
                      .++ +.+..++.|++.++  .|+|+++++|+|+||+||+++.+   +.+|++|||+++... ........+||+.|+||
T Consensus       135 ~~~~~~~~~~~~qi~~aL--~~LH~~givHrDlkp~NIll~~~---g~ikL~DFG~a~~~~~~~~~~~~~~gt~~y~aP  208 (373)
T 2r5t_A          135 CFLEPRARFYAAEIASAL--GYLHSLNIVYRDLKPENILLDSQ---GHIVLTDFGLCKENIEHNSTTSTFCGTPEYLAP  208 (373)
T ss_dssp             SCCHHHHHHHHHHHHHHH--HHHHHTTCCCCCCCGGGEEECTT---SCEEECCCCBCGGGBCCCCCCCSBSCCCCCCCH
T ss_pred             CCCHHHHHHHHHHHHHHH--HHHHHCCceecCCCHHHEEECCC---CCEEEeeCccccccccCCCccccccCCccccCH
Confidence            355 57889999999999  99999999999999999999885   789999999988643 33345677999999997

>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*

Probab=99.66  E-value=1.5e-16  Score=98.97  Aligned_cols=73  Identities=19%  Similarity=0.384  Sum_probs=62.2

Q ss_pred             hhcH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecC-CCccccccccccccccC
Q psy8010          10 ARIP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLS-RDVDVREILGTPDYVGE   87 (87)
Q Consensus        10 ~~~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~-~~~~~~~~~gt~~y~aP   87 (87)
                      +.++ +.+..++.|++.|+  .|+|++|++|+|++|+|++++.+   +.+|++|||+++... ........+||+.|+||
T Consensus       113 ~~~~~~~~~~~~~qi~~aL--~~LH~~~ivHrDlkp~NIll~~~---g~vkL~DFG~a~~~~~~~~~~~~~~gt~~y~aP  187 (345)
T 1xjd_A          113 HKFDLSRATFYAAEIILGL--QFLHSKGIVYRDLKLDNILLDKD---GHIKIADFGMCKENMLGDAKTNTFCGTPDYIAP  187 (345)
T ss_dssp             SSCCHHHHHHHHHHHHHHH--HHHHHTTCBCCCCCGGGEEECTT---SCEEECCCTTCBCCCCTTCCBCCCCSCGGGCCH
T ss_pred             CCCCHHHHHHHHHHHHHHH--HHHHHCCeEeCCCChhhEEECCC---CCEEEeEChhhhhcccCCCcccCCCCCcccCCh
Confidence            3455 57899999999999  99999999999999999999885   789999999998643 23344667999999998

>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*

Probab=99.66  E-value=1e-16  Score=98.48  Aligned_cols=82  Identities=12%  Similarity=0.270  Sum_probs=63.9

Q ss_pred             HHHHHhhhcH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCC--CCcEEEEeeccceecCCCcc------
Q psy8010           4 FIITLVARIP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYP--DCDVKLCDFGISRHLSRDVD------   74 (87)
Q Consensus         4 ~~~~~~~~~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~--~~~~kl~dfg~~~~~~~~~~------   74 (87)
                      ++......++ +.+..++.|++.++  .|+|+++++|+|++|+||+++.++.  ...++++|||+++.+.....      
T Consensus        94 ~~~~~~~~~~~~~~~~i~~qi~~~l--~~LH~~~iiHrDlkp~Nill~~~~~~~~~~~kl~DFg~a~~~~~~~~~~~~~~  171 (330)
T 2izr_A           94 LFDLCDRTFSLKTVLMIAIQLISRM--EYVHSKNLIYRDVKPENFLIGRPGNKTQQVIHIIDFALAKEYIDPETKKHIPY  171 (330)
T ss_dssp             HHHHTTTCCCHHHHHHHHHHHHHHH--HHHHHTTEECCCCCGGGEEECCGGGTCTTSEEECCCTTCEESBCTTTCCBCCC
T ss_pred             HHHHcCCCCCHHHHHHHHHHHHHHH--HHHHhCCeeccCCCHHHeeeccCCCCCCceEEEEEcccceeeecCCCCccccc
Confidence            3433344566 58999999999999  9999999999999999999987521  11299999999987643322      


Q ss_pred             --ccccccccccccC
Q psy8010          75 --VREILGTPDYVGE   87 (87)
Q Consensus        75 --~~~~~gt~~y~aP   87 (87)
                        ....+||+.|+||
T Consensus       172 ~~~~~~~gt~~y~aP  186 (330)
T 2izr_A          172 REHKSLTGTARYMSI  186 (330)
T ss_dssp             CCCCCCCSCTTTCCH
T ss_pred             cccCCcCCCccccCh
Confidence              2456899999997

>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B

Probab=99.66  E-value=1.4e-16  Score=99.39  Aligned_cols=74  Identities=22%  Similarity=0.407  Sum_probs=63.8

Q ss_pred             cH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCccccccccccccccC
Q psy8010          12 IP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDVDVREILGTPDYVGE   87 (87)
Q Consensus        12 ~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~~~~~~~gt~~y~aP   87 (87)
                      ++ +.+..++.|++.++  .|+|+++++|+|++|+||+++..+....+|++|||++............+||+.|+||
T Consensus       125 ~~~~~~~~~~~qi~~al--~~lH~~~ivH~Dlkp~NIll~~~~~~~~~kl~DfG~a~~~~~~~~~~~~~gt~~y~aP  199 (362)
T 2bdw_A          125 YSEADASHCIQQILESI--AYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSP  199 (362)
T ss_dssp             CCHHHHHHHHHHHHHHH--HHHHHTTCBCCCCSGGGEEESCSSTTCCEEECCCTTCBCCTTCCSCCCSCSCTTTCCH
T ss_pred             CCHHHHHHHHHHHHHHH--HHHHHCCeEeccCchHHEEEecCCCCCCEEEeecCcceEecCCcccccCCCCccccCH
Confidence            44 57899999999999  9999999999999999999987643456999999999877655555667999999998

>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*

Probab=99.66  E-value=1e-16  Score=101.96  Aligned_cols=71  Identities=23%  Similarity=0.446  Sum_probs=58.3

Q ss_pred             cH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCc-----------------
Q psy8010          12 IP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDV-----------------   73 (87)
Q Consensus        12 ~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~-----------------   73 (87)
                      ++ +.+..++.|++.|+  .|+|+++++|+|+||+||+++.+   +.+|++|||+++......                 
T Consensus       126 l~~~~~~~i~~qil~aL--~~LH~~givHrDlkp~NILl~~~---~~~kL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~  200 (432)
T 3n9x_A          126 LTEEHIKTILYNLLLGE--NFIHESGIIHRDLKPANCLLNQD---CSVKVCDFGLARTINSEKDTNIVNDLEENEEPGPH  200 (432)
T ss_dssp             CCHHHHHHHHHHHHHHH--HHHHHTTEECCCCCGGGEEECTT---CCEEECCCTTCEEC---------------------
T ss_pred             CCHHHHHHHHHHHHHHH--HHHHHCCCCCCCCCHHHeEECCC---CCEEEccCCCccccccccccccccccccccccccc
Confidence            45 58999999999999  99999999999999999999885   789999999998764322                 


Q ss_pred             ------cccccccccccccC
Q psy8010          74 ------DVREILGTPDYVGE   87 (87)
Q Consensus        74 ------~~~~~~gt~~y~aP   87 (87)
                            .....+||++|+||
T Consensus       201 ~~~~~~~~~~~~gt~~Y~AP  220 (432)
T 3n9x_A          201 NKNLKKQLTSHVVTRWYRAP  220 (432)
T ss_dssp             ----------CCCCCTTCCH
T ss_pred             ccchhccccCCCCCccccCH
Confidence                  23567999999998

>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}

Probab=99.66  E-value=1.6e-16  Score=96.68  Aligned_cols=71  Identities=24%  Similarity=0.418  Sum_probs=62.9

Q ss_pred             cH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCccccccccccccccC
Q psy8010          12 IP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDVDVREILGTPDYVGE   87 (87)
Q Consensus        12 ~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~~~~~~~gt~~y~aP   87 (87)
                      ++ +.+..++.|++.++  .|+|+++++|+|++|+|++++.+   ..++++|||++.............||+.|+||
T Consensus       117 ~~~~~~~~i~~qi~~al--~~lH~~~ivH~Dlkp~Nil~~~~---~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aP  188 (308)
T 3g33_A          117 LPAETIKDLMRQFLRGL--DFLHANCIVHRDLKPENILVTSG---GTVKLADFGLARIYSYQMALTPVVVTLWYRAP  188 (308)
T ss_dssp             SCHHHHHHHHHHHHHHH--HHHHHTTCCCSCCCTTTEEECTT---SCEEECSCSCTTTSTTCCCSGGGGCCCSSCCH
T ss_pred             CCHHHHHHHHHHHHHHH--HHHHHCCcccCCCCHHHEEEcCC---CCEEEeeCccccccCCCcccCCccccccccCc
Confidence            55 57899999999999  99999999999999999999875   78999999999876655555677999999998

>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*

Probab=99.66  E-value=1.4e-16  Score=101.13  Aligned_cols=72  Identities=22%  Similarity=0.424  Sum_probs=62.1

Q ss_pred             hcH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCcc--ccccccccccccC
Q psy8010          11 RIP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDVD--VREILGTPDYVGE   87 (87)
Q Consensus        11 ~~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~~--~~~~~gt~~y~aP   87 (87)
                      .++ +.+..++.|++.|+  .|+|+++++|+|+||+|++++.+   +.+|++|||+++.+.....  ..+.+||+.|+||
T Consensus       164 ~~~e~~~~~~~~qi~~aL--~~LH~~givHrDLKp~NILl~~~---g~ikL~DFG~a~~~~~~~~~~~~~~~gt~~Y~AP  238 (410)
T 3v8s_A          164 DVPEKWARFYTAEVVLAL--DAIHSMGFIHRDVKPDNMLLDKS---GHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISP  238 (410)
T ss_dssp             CCCHHHHHHHHHHHHHHH--HHHHHTTEECCCCSGGGEEECTT---SCEEECCCTTCEECCTTSEEECCSCCSCGGGCCH
T ss_pred             CCCHHHHHHHHHHHHHHH--HHHHHCCeEeccCCHHHeeECCC---CCEEEeccceeEeeccCCcccccCCcCCccccCH
Confidence            355 57899999999999  99999999999999999999885   7899999999987754432  3467999999998

>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}

Probab=99.65  E-value=1.8e-16  Score=96.61  Aligned_cols=79  Identities=13%  Similarity=0.312  Sum_probs=62.1

Q ss_pred             HHHHHhhhcH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCccc-------
Q psy8010           4 FIITLVARIP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDVDV-------   75 (87)
Q Consensus         4 ~~~~~~~~~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~~~-------   75 (87)
                      ++......++ +++..++.|++.++  .|+|+++++|+|++|+|++++.+   ..++++|||++.........       
T Consensus        97 ~l~~~~~~~~~~~~~~i~~qi~~al--~~lH~~~ivH~dlkp~Nil~~~~---~~~kl~Dfg~~~~~~~~~~~~~~~~~~  171 (310)
T 3s95_A           97 IIKSMDSQYPWSQRVSFAKDIASGM--AYLHSMNIIHRDLNSHNCLVREN---KNVVVADFGLARLMVDEKTQPEGLRSL  171 (310)
T ss_dssp             HHHHCCTTSCHHHHHHHHHHHHHHH--HHHHHTTEECSCCSTTSEEECTT---SCEEECCCTTCEECC------------
T ss_pred             HHHhccCCCCHHHHHHHHHHHHHHH--HHHHhCCccCCCCCcCeEEECCC---CCEEEeecccceecccccccccccccc
Confidence            3443344555 57889999999999  99999999999999999999875   78999999999876332211       


Q ss_pred             --------cccccccccccC
Q psy8010          76 --------REILGTPDYVGE   87 (87)
Q Consensus        76 --------~~~~gt~~y~aP   87 (87)
                              ...+||+.|+||
T Consensus       172 ~~~~~~~~~~~~gt~~y~aP  191 (310)
T 3s95_A          172 KKPDRKKRYTVVGNPYWMAP  191 (310)
T ss_dssp             --------CCCCSCGGGCCH
T ss_pred             cccccccccccCCCcceeCH
Confidence                    256899999997

>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7

Probab=99.65  E-value=7e-17  Score=99.33  Aligned_cols=74  Identities=19%  Similarity=0.405  Sum_probs=64.1

Q ss_pred             hcH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCccccccccccccccC
Q psy8010          11 RIP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDVDVREILGTPDYVGE   87 (87)
Q Consensus        11 ~~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~~~~~~~gt~~y~aP   87 (87)
                      .++ +.+..++.|++.++  .|+|+++++|+|++|+|++++..+ +..++++|||++..+..+.......||+.|+||
T Consensus        98 ~~~~~~~~~i~~qi~~al--~~lH~~givH~Dlkp~NIl~~~~~-~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aP  172 (321)
T 1tki_A           98 ELNEREIVSYVHQVCEAL--QFLHSHNIGHFDIRPENIIYQTRR-SSTIKIIEFGQARQLKPGDNFRLLFTAPEYYAP  172 (321)
T ss_dssp             CCCHHHHHHHHHHHHHHH--HHHHHTTEECCCCCGGGEEESSSS-CCCEEECCCTTCEECCTTCEEEEEESCGGGSCH
T ss_pred             CCCHHHHHHHHHHHHHHH--HHHHHCCCCcCCCCHHHEEEccCC-CCCEEEEECCCCeECCCCCccccccCChhhcCc
Confidence            355 57899999999999  999999999999999999998632 368999999999987766666677899999997

>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}

Probab=99.65  E-value=3.9e-16  Score=97.84  Aligned_cols=80  Identities=15%  Similarity=0.271  Sum_probs=65.1

Q ss_pred             HHHHhhhcH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCccccccccccc
Q psy8010           5 IITLVARIP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDVDVREILGTPD   83 (87)
Q Consensus         5 ~~~~~~~~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~~~~~~~gt~~   83 (87)
                      +......++ ..+..++.|++.++  .|+|+++++|+|++|+|+++..++ ...+|++|||+++.+.........+||+.
T Consensus       177 l~~~~~~l~~~~~~~i~~qi~~aL--~~LH~~~ivH~Dlkp~NIll~~~~-~~~~kl~DFG~a~~~~~~~~~~~~~gt~~  253 (373)
T 2x4f_A          177 IIDESYNLTELDTILFMKQICEGI--RHMHQMYILHLDLKPENILCVNRD-AKQIKIIDFGLARRYKPREKLKVNFGTPE  253 (373)
T ss_dssp             HHHTGGGCCHHHHHHHHHHHHHHH--HHHHHTTEECCCCCGGGEEEEETT-TTEEEECCCSSCEECCTTCBCCCCCSSCT
T ss_pred             HHhcCCCCCHHHHHHHHHHHHHHH--HHHHHCCcccccCCHHHEEEecCC-CCcEEEEeCCCceecCCccccccccCCCc
Confidence            333333455 57888999999999  999999999999999999986432 36799999999998766655666789999


Q ss_pred             cccC
Q psy8010          84 YVGE   87 (87)
Q Consensus        84 y~aP   87 (87)
                      |+||
T Consensus       254 y~aP  257 (373)
T 2x4f_A          254 FLAP  257 (373)
T ss_dssp             TCCH
T ss_pred             EeCh
Confidence            9998

>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*

Probab=99.65  E-value=2.2e-16  Score=101.52  Aligned_cols=75  Identities=23%  Similarity=0.566  Sum_probs=62.2

Q ss_pred             hcH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCccccccccccccccC
Q psy8010          11 RIP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDVDVREILGTPDYVGE   87 (87)
Q Consensus        11 ~~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~~~~~~~gt~~y~aP   87 (87)
                      .++ ..+..++.|++.++  .|+|+++++|+|++|+|+++...+....+|++|||++..+.........+||+.|+||
T Consensus       117 ~~~~~~~~~i~~qi~~al--~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aP  192 (486)
T 3mwu_A          117 RFSEHDAARIIKQVFSGI--TYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAP  192 (486)
T ss_dssp             SCCHHHHHHHHHHHHHHH--HHHHHTTCCCSCCSGGGEEESSSSTTCCEEECSCSCTTTBCCC----CCTTGGGGCCG
T ss_pred             CCCHHHHHHHHHHHHHHH--HHHHHCCeEeccCchHHEEEecCCCCCCEEEEECCcCeECCCCCccCCCcCCCCCCCH
Confidence            455 58899999999999  9999999999999999999976544567999999999877655556677899999998

>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*

Probab=99.65  E-value=1.9e-16  Score=104.17  Aligned_cols=71  Identities=15%  Similarity=0.326  Sum_probs=63.7

Q ss_pred             cH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCccccccccccccccC
Q psy8010          12 IP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDVDVREILGTPDYVGE   87 (87)
Q Consensus        12 ~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~~~~~~~gt~~y~aP   87 (87)
                      ++ +.+..++.|++.|+  .|+|+++++|+|+||+||+++.+   +.+|++|||++..+..+......+||+.|+||
T Consensus       283 l~e~~~~~i~~qIl~aL--~yLH~~gIvHrDLKPeNILld~~---g~vKL~DFGla~~~~~~~~~~~~~GT~~Y~AP  354 (576)
T 2acx_A          283 FPEARAVFYAAEICCGL--EDLHRERIVYRDLKPENILLDDH---GHIRISDLGLAVHVPEGQTIKGRVGTVGYMAP  354 (576)
T ss_dssp             CCHHHHHHHHHHHHHHH--HHHHHTTEECCCCCGGGEEECTT---SCEEECCCTTCEECCTTCCEECCCSCGGGCCH
T ss_pred             CCHHHHHHHHHHHHHHH--HHHHHCCEeccCCchheEEEeCC---CCeEEEecccceecccCccccccCCCccccCH
Confidence            55 57899999999999  99999999999999999999875   78999999999987666666667999999998

>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A

Probab=99.65  E-value=3e-16  Score=94.88  Aligned_cols=74  Identities=23%  Similarity=0.328  Sum_probs=62.7

Q ss_pred             hhhcH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCc-ccccccccccccc
Q psy8010           9 VARIP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDV-DVREILGTPDYVG   86 (87)
Q Consensus         9 ~~~~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~-~~~~~~gt~~y~a   86 (87)
                      .+.++ +.+..++.|++.++  .|+|++|++|+|++|+|++++.+   ..++++|||++....... ......||+.|+|
T Consensus        95 ~~~l~~~~~~~~~~ql~~~l--~~lH~~~ivH~dikp~Nil~~~~---~~~kl~Dfg~~~~~~~~~~~~~~~~~t~~y~a  169 (292)
T 3o0g_A           95 NGDLDPEIVKSFLFQLLKGL--GFCHSRNVLHRDLKPQNLLINRN---GELKLANFGLARAFGIPVRCYSAEVVTLWYRP  169 (292)
T ss_dssp             TTCCCHHHHHHHHHHHHHHH--HHHHHTTEECCCCSGGGEEECTT---SCEEECCCTTCEECCSCCSCCCSCCSCGGGCC
T ss_pred             CCCCCHHHHHHHHHHHHHHH--HHHHhCCeecCCCCHHHEEEcCC---CCEEEeecccceecCCccccccCCccccCCcC
Confidence            34566 58899999999999  99999999999999999999985   789999999998764332 3355688999999


Q ss_pred             C
Q psy8010          87 E   87 (87)
Q Consensus        87 P   87 (87)
                      |
T Consensus       170 P  170 (292)
T 3o0g_A          170 P  170 (292)
T ss_dssp             H
T ss_pred             h
Confidence            7

>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...

Probab=99.65  E-value=4.2e-16  Score=95.46  Aligned_cols=78  Identities=13%  Similarity=0.263  Sum_probs=66.0

Q ss_pred             HHHhhhcH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCcccccccccccc
Q psy8010           6 ITLVARIP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDVDVREILGTPDY   84 (87)
Q Consensus         6 ~~~~~~~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~~~~~~~gt~~y   84 (87)
                      .+....++ ..+..++.|++.++  .|+|+++++|+|++|+|++++.+  ...++++|||++..+..........|++.|
T Consensus       121 ~~~~~~~~~~~~~~~~~qi~~~l--~~lH~~~ivH~Dikp~Nil~~~~--~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~y  196 (330)
T 3nsz_A          121 KQLYQTLTDYDIRFYMYEILKAL--DYCHSMGIMHRDVKPHNVMIDHE--HRKLRLIDWGLAEFYHPGQEYNVRVASRYF  196 (330)
T ss_dssp             HHHGGGCCHHHHHHHHHHHHHHH--HHHHHTTEECCCCSGGGEEEETT--TTEEEECCCTTCEECCTTCCCCSCCSCGGG
T ss_pred             HHHHHhCCHHHHHHHHHHHHHHH--HHHHhCCeeeCCCCHHHEEEcCC--CCEEEEEeCCCceEcCCCCccccccccccc
Confidence            34445566 57899999999999  99999999999999999999875  247999999999887666666677899999


Q ss_pred             ccC
Q psy8010          85 VGE   87 (87)
Q Consensus        85 ~aP   87 (87)
                      +||
T Consensus       197 ~aP  199 (330)
T 3nsz_A          197 KGP  199 (330)
T ss_dssp             CCH
T ss_pred             cCh
Confidence            987

>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}

Probab=99.65  E-value=3.6e-16  Score=100.04  Aligned_cols=75  Identities=20%  Similarity=0.333  Sum_probs=62.9

Q ss_pred             hcH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCc-cccccccccccccC
Q psy8010          11 RIP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDV-DVREILGTPDYVGE   87 (87)
Q Consensus        11 ~~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~-~~~~~~gt~~y~aP   87 (87)
                      .++ +.+..++.|++.++  .|+|+++++|+|+||+||+++....+..+|++|||++....... .....+||+.|+||
T Consensus       106 ~~~e~~~~~i~~qil~aL--~~lH~~givHrDlKp~NIll~~~~~~~~vkL~DFG~a~~~~~~~~~~~~~~gt~~Y~AP  182 (444)
T 3soa_A          106 YYSEADASHCIQQILEAV--LHCHQMGVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFGFAGTPGYLSP  182 (444)
T ss_dssp             CCCHHHHHHHHHHHHHHH--HHHHHTTCBCCCCSSTTEEESBSSTTCCEEECCCSSCBCCCTTCCBCCCSCSCGGGCCH
T ss_pred             CCCHHHHHHHHHHHHHHH--HHHHHCCccccCCCHHHEEEeccCCCCcEEEccCceeEEecCCCceeecccCCcccCCH
Confidence            345 57899999999999  99999999999999999999865335789999999998765433 33567899999998

>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*

Probab=99.65  E-value=3.6e-16  Score=100.74  Aligned_cols=75  Identities=24%  Similarity=0.431  Sum_probs=64.8

Q ss_pred             hcH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCccccccccccccccC
Q psy8010          11 RIP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDVDVREILGTPDYVGE   87 (87)
Q Consensus        11 ~~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~~~~~~~gt~~y~aP   87 (87)
                      .++ ..+..++.|++.++  .|+|+++++|+|++|+|+++...+....+|++|||++..+.........+||+.|+||
T Consensus       132 ~~~~~~~~~i~~qi~~~l--~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~kl~DfG~a~~~~~~~~~~~~~gt~~y~aP  207 (494)
T 3lij_A          132 KFNEVDAAVIIKQVLSGV--TYLHKHNIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQKKMKERLGTAYYIAP  207 (494)
T ss_dssp             SCCHHHHHHHHHHHHHHH--HHHHHTTEECSCCSGGGEEESCSSTTCCEEECCCTTCEECBTTBCBCCCCSCTTTCCH
T ss_pred             CCCHHHHHHHHHHHHHHH--HHHHHCCceeccCChhhEEEeCCCCCCcEEEEECCCCeECCCCccccccCCCcCeeCH
Confidence            344 57899999999999  9999999999999999999987544466999999999987666666677999999998

>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A

Probab=99.64  E-value=4.6e-16  Score=96.60  Aligned_cols=74  Identities=18%  Similarity=0.341  Sum_probs=62.4

Q ss_pred             cH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCcc-ccccccccccccC
Q psy8010          12 IP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDVD-VREILGTPDYVGE   87 (87)
Q Consensus        12 ~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~~-~~~~~gt~~y~aP   87 (87)
                      ++ +.+..++.|++.++  .|+|+++++|+|+||+|++++.++....+|++|||++........ ....+||+.|+||
T Consensus       127 ~~~~~~~~i~~qi~~al--~~lH~~~ivHrDlkp~NIl~~~~~~~~~vkl~Dfg~a~~~~~~~~~~~~~~gt~~y~aP  202 (351)
T 3c0i_A          127 YSEAVASHYMRQILEAL--RYCHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGLVAGGRVGTPHFMAP  202 (351)
T ss_dssp             CCHHHHHHHHHHHHHHH--HHHHHTTEECSCCSGGGEEECSSSTTCCEEECCCTTCEECCTTSCBCCCCCSCGGGCCH
T ss_pred             CCHHHHHHHHHHHHHHH--HHHHHCCceeccCChHHeEEecCCCCCcEEEecCcceeEecCCCeeecCCcCCcCccCH
Confidence            45 57889999999999  999999999999999999998764445699999999988754433 3456899999998

>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}

Probab=99.64  E-value=2.2e-16  Score=102.06  Aligned_cols=82  Identities=15%  Similarity=0.306  Sum_probs=64.6

Q ss_pred             HHHHHhhhcH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCccc-------
Q psy8010           4 FIITLVARIP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDVDV-------   75 (87)
Q Consensus         4 ~~~~~~~~~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~~~-------   75 (87)
                      ++......++ +.+..++.|++.+|  .|+|+++++|+|+||+||++...+....+||+|||+++.+......       
T Consensus        92 ll~~~~~~l~~~~~~~i~~qi~~aL--~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~  169 (483)
T 3sv0_A           92 LFNFCSRKLSLKTVLMLADQMINRV--EFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKKYRDTSTHQHIPYRE  169 (483)
T ss_dssp             HHHHTTTCCCHHHHHHHHHHHHHHH--HHHHHTTEECCCCCGGGEEECCGGGTTCEEECCCTTCEECBCTTTCCBCCCCC
T ss_pred             HHHhhcCCCCHHHHHHHHHHHHHHH--HHHHHCCEeecccCcceEEEecCCCCCeEEEEeCCcceeccCCcccccccccc
Confidence            3444445566 58999999999999  9999999999999999999953222478999999999876443321       


Q ss_pred             -cccccccccccC
Q psy8010          76 -REILGTPDYVGE   87 (87)
Q Consensus        76 -~~~~gt~~y~aP   87 (87)
                       ....||+.|+||
T Consensus       170 ~~~~~gt~~Y~aP  182 (483)
T 3sv0_A          170 NKNLTGTARYASV  182 (483)
T ss_dssp             CCCCCSCTTTCCH
T ss_pred             ccccCCCccccCH
Confidence             256899999987

>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*

Probab=99.64  E-value=3.1e-16  Score=98.04  Aligned_cols=75  Identities=21%  Similarity=0.449  Sum_probs=63.9

Q ss_pred             hcH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCC-CCcEEEEeeccceecCCCccccccccccccccC
Q psy8010          11 RIP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYP-DCDVKLCDFGISRHLSRDVDVREILGTPDYVGE   87 (87)
Q Consensus        11 ~~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~-~~~~kl~dfg~~~~~~~~~~~~~~~gt~~y~aP   87 (87)
                      .++ +.+..++.|++.++  .|+|++|++|+|++|+|+++...+. ...++++|||++..+.........+||+.|+||
T Consensus       111 ~l~~~~~~~i~~qi~~aL--~~LH~~givHrDlkp~NIll~~~~~~~~~vkl~DFG~a~~~~~~~~~~~~~gt~~y~aP  187 (361)
T 2yab_A          111 SLSEEEATSFIKQILDGV--NYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAP  187 (361)
T ss_dssp             CCBHHHHHHHHHHHHHHH--HHHHHTTEECCCCSGGGEEESCTTSSSCCEEECCCSSCEECCTTCCCCCCCSCGGGCCH
T ss_pred             CCCHHHHHHHHHHHHHHH--HHHHHCCcccCCCCHHHEEEeCCCCCccCEEEEecCCceEcCCCCccccCCCCccEECc
Confidence            355 58899999999999  9999999999999999999987521 127999999999987766666677999999998

>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A

Probab=99.64  E-value=2.5e-16  Score=99.92  Aligned_cols=74  Identities=23%  Similarity=0.442  Sum_probs=55.9

Q ss_pred             cH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCccccccccccccccC
Q psy8010          12 IP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDVDVREILGTPDYVGE   87 (87)
Q Consensus        12 ~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~~~~~~~gt~~y~aP   87 (87)
                      ++ ..+..++.|++.++  .|+|+++++|+|+||+|++++..+....+|++|||+++...........+||+.|+||
T Consensus       236 ~~~~~~~~i~~qi~~~l--~~LH~~~ivHrDlkp~NIll~~~~~~~~~kl~DFG~a~~~~~~~~~~~~~gt~~y~aP  310 (419)
T 3i6u_A          236 LKEATCKLYFYQMLLAV--QYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAP  310 (419)
T ss_dssp             CCHHHHHHHHHHHHHHH--HHHHHTTCCCSCCCGGGEEESSSSSSCCEEECCSSTTTSCC-----------CTTCCT
T ss_pred             CCHHHHHHHHHHHHHHH--HHHHHCCccccCCChHhEEEecCCCcceEEEeecccceecCCCccccccCCCCCccCc
Confidence            44 57899999999999  9999999999999999999987543456999999999877655555678999999998

>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}

Probab=99.64  E-value=2.6e-16  Score=101.52  Aligned_cols=72  Identities=22%  Similarity=0.468  Sum_probs=64.3

Q ss_pred             hcH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCccccccccccccccC
Q psy8010          11 RIP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDVDVREILGTPDYVGE   87 (87)
Q Consensus        11 ~~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~~~~~~~gt~~y~aP   87 (87)
                      +++ +.+..++.|++.|+  .|+|+++++|+|++|+|++++.+   ..+|++|||++.....+....+.+||+.|+||
T Consensus       112 ~l~~~~~~~i~~qi~~aL--~~LH~~givHrDLkp~NIll~~~---~~vkL~DFG~a~~~~~~~~~~~~~gt~~y~aP  184 (476)
T 2y94_A          112 RLDEKESRRLFQQILSGV--DYCHRHMVVHRDLKPENVLLDAH---MNAKIADFGLSNMMSDGEFLRTSCGSPNYAAP  184 (476)
T ss_dssp             SCCHHHHHHHHHHHHHHH--HHHHTTTEECSCCSGGGEEECTT---CCEEECCCSSCEECCTTCCBCCCCSCSTTCCH
T ss_pred             CCCHHHHHHHHHHHHHHH--HHHHHCCCCcccccHHHEEEecC---CCeEEEeccchhhccccccccccCCCcCeECh
Confidence            355 58899999999999  99999999999999999999875   78999999999987766666778999999998

>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}

Probab=99.64  E-value=2.7e-16  Score=97.24  Aligned_cols=71  Identities=20%  Similarity=0.334  Sum_probs=63.4

Q ss_pred             cH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCccccccccccccccC
Q psy8010          12 IP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDVDVREILGTPDYVGE   87 (87)
Q Consensus        12 ~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~~~~~~~gt~~y~aP   87 (87)
                      ++ +.+..++.|++.++  .|+|+++++|+|++|.|++++.+   ..++++|||++............+||+.|+||
T Consensus       127 l~~~~~~~i~~qi~~~L--~~LH~~~ivH~Dlkp~NIll~~~---~~~kL~Dfg~a~~~~~~~~~~~~~gt~~y~aP  198 (335)
T 3dls_A          127 LDEPLASYIFRQLVSAV--GYLRLKDIIHRDIKDENIVIAED---FTIKLIDFGSAAYLERGKLFYTFCGTIEYCAP  198 (335)
T ss_dssp             CCHHHHHHHHHHHHHHH--HHHHHTTEECSCCSGGGEEECTT---SCEEECCCTTCEECCTTCCBCEECSCGGGCCH
T ss_pred             CCHHHHHHHHHHHHHHH--HHHHhCCeEEeccCHHHEEEcCC---CcEEEeecccceECCCCCceeccCCCccccCh
Confidence            44 57889999999999  99999999999999999999885   78999999999987666666677899999997

>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*

Probab=99.64  E-value=3.8e-16  Score=94.35  Aligned_cols=82  Identities=17%  Similarity=0.265  Sum_probs=63.8

Q ss_pred             HHHHHhhhcH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCC--CCCcEEEEeeccceecCCCcc------
Q psy8010           4 FIITLVARIP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEY--PDCDVKLCDFGISRHLSRDVD------   74 (87)
Q Consensus         4 ~~~~~~~~~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~--~~~~~kl~dfg~~~~~~~~~~------   74 (87)
                      ++......++ +.+..++.|++.++  .++|+++++|+|++|+|++++.++  ....++++|||++........      
T Consensus        95 ~l~~~~~~~~~~~~~~i~~qi~~~l--~~lH~~~ivH~Dlkp~NIl~~~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~  172 (298)
T 1csn_A           95 LLDLCGRKFSVKTVAMAAKQMLARV--QSIHEKSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYRDPVTKQHIPY  172 (298)
T ss_dssp             HHHHTTTCCCHHHHHHHHHHHHHHH--HHHHTTTEECCCCCGGGEEECCSSSTTTTCEEECCCTTCEESBCTTTCCBCCC
T ss_pred             HHHHhccCCCHHHHHHHHHHHHHHH--HHHHhCCEecCCCCHHHEEeccCCCCCCCeEEEEECccccccccccccccccc
Confidence            3443334466 58999999999999  999999999999999999998752  123499999999987643322      


Q ss_pred             --ccccccccccccC
Q psy8010          75 --VREILGTPDYVGE   87 (87)
Q Consensus        75 --~~~~~gt~~y~aP   87 (87)
                        .....||+.|+||
T Consensus       173 ~~~~~~~gt~~y~aP  187 (298)
T 1csn_A          173 REKKNLSGTARYMSI  187 (298)
T ss_dssp             CCCCCCCSCTTTCCH
T ss_pred             cCccCCCCCcccCCc
Confidence              2456899999997

>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A

Probab=99.64  E-value=3.3e-16  Score=94.55  Aligned_cols=82  Identities=12%  Similarity=0.257  Sum_probs=64.0

Q ss_pred             HHHHHhhhcH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCcc--------
Q psy8010           4 FIITLVARIP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDVD--------   74 (87)
Q Consensus         4 ~~~~~~~~~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~~--------   74 (87)
                      ++......++ +.+..++.|++.++  .|+|+++++|+|++|.|++++..++...++++|||++........        
T Consensus        94 ~~~~~~~~~~~~~~~~i~~qi~~~l--~~lH~~~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~  171 (296)
T 3uzp_A           94 LFNFCSRKFSLKTVLLLADQMISRI--EYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRE  171 (296)
T ss_dssp             HHHHTTTCCCHHHHHHHHHHHHHHH--HHHHHTTEECSCCCGGGEEECCGGGTTCEEECCCTTCEECBCTTTCCBCCCCC
T ss_pred             HHHhhccCCCHHHHHHHHHHHHHHH--HHHHhCCeeeCCCCHHHeEEecCCCCCeEEEeeCCCccccccccccccccccc
Confidence            3433344566 58899999999999  999999999999999999996222247899999999987644322        


Q ss_pred             ccccccccccccC
Q psy8010          75 VREILGTPDYVGE   87 (87)
Q Consensus        75 ~~~~~gt~~y~aP   87 (87)
                      .....||+.|+||
T Consensus       172 ~~~~~gt~~y~aP  184 (296)
T 3uzp_A          172 NKNLTGTARYASI  184 (296)
T ss_dssp             SCCCCSCTTTCCH
T ss_pred             ccccccccccCCh
Confidence            2456899999997

>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}

Probab=99.63  E-value=4.6e-16  Score=97.40  Aligned_cols=73  Identities=25%  Similarity=0.427  Sum_probs=63.6

Q ss_pred             hcH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCccccccccccccccC
Q psy8010          11 RIP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDVDVREILGTPDYVGE   87 (87)
Q Consensus        11 ~~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~~~~~~~gt~~y~aP   87 (87)
                      .++ +.+..++.|++.++  .|+|++|++|+|++|+|++++..  +..+|++|||+++.+..........||+.|+||
T Consensus       137 ~l~~~~~~~i~~qi~~aL--~~LH~~gi~H~Dikp~Nil~~~~--~~~~kl~Dfg~a~~~~~~~~~~~~~~t~~y~aP  210 (383)
T 3eb0_A          137 SIPMNLISIYIYQLFRAV--GFIHSLGICHRDIKPQNLLVNSK--DNTLKLCDFGSAKKLIPSEPSVAYICSRFYRAP  210 (383)
T ss_dssp             CCCHHHHHHHHHHHHHHH--HHHHTTTEECSCCCGGGEEEETT--TTEEEECCCTTCEECCTTSCCCCCCCCSSCCCH
T ss_pred             CCCHHHHHHHHHHHHHHH--HHHHHCcCccCccCHHHEEEcCC--CCcEEEEECCCCcccCCCCCCcCcccCCCccCH
Confidence            345 57899999999999  99999999999999999999843  378999999999987666666677899999997

>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...

Probab=99.63  E-value=5e-16  Score=96.69  Aligned_cols=70  Identities=16%  Similarity=0.339  Sum_probs=61.0

Q ss_pred             hcH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCccccccccccccccC
Q psy8010          11 RIP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDVDVREILGTPDYVGE   87 (87)
Q Consensus        11 ~~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~~~~~~~gt~~y~aP   87 (87)
                      .++ +.+..++.|++.++  .|+|+++++|+|++|+|++++.+   +.++++|||+++.....  ....+||+.|+||
T Consensus       137 ~~~~~~~~~~~~qi~~aL--~~LH~~~ivHrDlkp~NIll~~~---g~~kL~DFg~a~~~~~~--~~~~~gt~~y~aP  207 (350)
T 1rdq_E          137 RFSEPHARFYAAQIVLTF--EYLHSLDLIYRDLKPENLLIDQQ---GYIQVTDFGFAKRVKGR--TWTLCGTPEALAP  207 (350)
T ss_dssp             CCCHHHHHHHHHHHHHHH--HHHHHTTEECCCCSGGGEEECTT---SCEEECCCTTCEECSSC--BCCCEECGGGCCH
T ss_pred             CCCHHHHHHHHHHHHHHH--HHHHHCCcccccCccceEEECCC---CCEEEcccccceeccCC--cccccCCccccCH
Confidence            455 58899999999999  99999999999999999999875   78999999999876432  3456899999998

>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A

Probab=99.63  E-value=3.9e-16  Score=94.14  Aligned_cols=81  Identities=12%  Similarity=0.252  Sum_probs=63.0

Q ss_pred             HHHHhhhcH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCcc--------c
Q psy8010           5 IITLVARIP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDVD--------V   75 (87)
Q Consensus         5 ~~~~~~~~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~~--------~   75 (87)
                      +......++ +.+..++.|++.++  .|+|+++++|+|++|+|+++...+....++++|||++........        .
T Consensus        95 ~~~~~~~~~~~~~~~i~~qi~~~l--~~LH~~~ivH~Dlkp~NIl~~~~~~~~~~kL~Dfg~a~~~~~~~~~~~~~~~~~  172 (296)
T 4hgt_A           95 FNFCSRKFSLKTVLLLADQMISRI--EYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYREN  172 (296)
T ss_dssp             HHHTTSCCCHHHHHHHHHHHHHHH--HHHHHTTEECSCCSGGGEEECCGGGTTCEEECCCTTCEECBCTTTCCBCCCCCS
T ss_pred             HHHhcCCCCHHHHHHHHHHHHHHH--HHHHHCCeecCCCCHHHeeeeccCCCCeEEEecCccceeccCcccCccCCCCcc
Confidence            333344566 58899999999999  999999999999999999994222247899999999987643322        2


Q ss_pred             cccccccccccC
Q psy8010          76 REILGTPDYVGE   87 (87)
Q Consensus        76 ~~~~gt~~y~aP   87 (87)
                      ....||+.|+||
T Consensus       173 ~~~~gt~~y~aP  184 (296)
T 4hgt_A          173 KNLTGTARYASI  184 (296)
T ss_dssp             CCCCSCGGGCCH
T ss_pred             cccCCCccccch
Confidence            356899999987

>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}

Probab=99.63  E-value=7.4e-16  Score=99.48  Aligned_cols=75  Identities=24%  Similarity=0.487  Sum_probs=65.3

Q ss_pred             hcH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCccccccccccccccC
Q psy8010          11 RIP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDVDVREILGTPDYVGE   87 (87)
Q Consensus        11 ~~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~~~~~~~gt~~y~aP   87 (87)
                      .++ +.+..++.|++.++  .|+|+++++|+|++|+|+++...+....++++|||++..+.........+||+.|+||
T Consensus       142 ~~~~~~~~~i~~qi~~~l--~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aP  217 (504)
T 3q5i_A          142 KFDECDAANIMKQILSGI--CYLHKHNIVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSKDYKLRDRLGTAYYIAP  217 (504)
T ss_dssp             CCCHHHHHHHHHHHHHHH--HHHHHTTEECSCCSGGGEEESSTTCCSSEEECCCTTCEECCTTSCBCCCCSCTTTCCH
T ss_pred             CCCHHHHHHHHHHHHHHH--HHHHHCCeEeCCCcHHHEEEecCCCCccEEEEECCCCEEcCCCCccccccCCcCCCCH
Confidence            455 57899999999999  9999999999999999999988643447999999999987766666777999999998

>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*

Probab=99.63  E-value=3.7e-16  Score=95.60  Aligned_cols=71  Identities=21%  Similarity=0.301  Sum_probs=59.7

Q ss_pred             cH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCC-ccccccccccccccC
Q psy8010          12 IP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRD-VDVREILGTPDYVGE   87 (87)
Q Consensus        12 ~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~-~~~~~~~gt~~y~aP   87 (87)
                      ++ +.+..++.|++.++  .|+|+++++|+|++|+|++++.+   ..+|++|||++...... .......||+.|+||
T Consensus       116 ~~~~~~~~~~~qi~~~l--~~LH~~~ivH~Dikp~NIl~~~~---~~~kl~Dfg~a~~~~~~~~~~~~~~~t~~y~aP  188 (311)
T 3niz_A          116 LQDSQIKIYLYQLLRGV--AHCHQHRILHRDLKPQNLLINSD---GALKLADFGLARAFGIPVRSYTHEVVTLWYRAP  188 (311)
T ss_dssp             CCHHHHHHHHHHHHHHH--HHHHHTTEECCCCCGGGEEECTT---CCEEECCCTTCEETTSCCC---CCCCCCTTCCH
T ss_pred             CCHHHHHHHHHHHHHHH--HHHHHCCcccCCCchHhEEECCC---CCEEEccCcCceecCCCcccccCCcccCCcCCH
Confidence            55 57899999999999  99999999999999999999885   78999999999876433 233456889999997

>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7

Probab=99.63  E-value=7.4e-16  Score=96.29  Aligned_cols=70  Identities=19%  Similarity=0.407  Sum_probs=60.7

Q ss_pred             hcH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCccccccccccccccC
Q psy8010          11 RIP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDVDVREILGTPDYVGE   87 (87)
Q Consensus        11 ~~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~~~~~~~gt~~y~aP   87 (87)
                      .++ +.+..++.|++.++  .|+|++|++|+|++|+|++++.+   +.+|++|||+++....  .....+||++|+||
T Consensus       124 ~l~~~~~~~~~~qi~~~L--~~LH~~~ivH~Dlkp~NIll~~~---~~~kl~Dfg~a~~~~~--~~~~~~~t~~y~aP  194 (367)
T 1cm8_A          124 KLGEDRIQFLVYQMLKGL--RYIHAAGIIHRDLKPGNLAVNED---CELKILDFGLARQADS--EMTGYVVTRWYRAP  194 (367)
T ss_dssp             CCCHHHHHHHHHHHHHHH--HHHHHTTEECCCCCGGGEEECTT---CCEEECCCTTCEECCS--SCCSSCSCGGGCCT
T ss_pred             CCCHHHHHHHHHHHHHHH--HHHHHCCccccCcCHHHEEEcCC---CCEEEEeeeccccccc--ccCcCcCCCCcCCH
Confidence            455 57899999999999  99999999999999999999885   7899999999987543  24456899999998

>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7

Probab=99.63  E-value=2.2e-16  Score=99.56  Aligned_cols=74  Identities=20%  Similarity=0.312  Sum_probs=63.1

Q ss_pred             hcH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCccccccccccccccC
Q psy8010          11 RIP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDVDVREILGTPDYVGE   87 (87)
Q Consensus        11 ~~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~~~~~~~gt~~y~aP   87 (87)
                      .++ +.+..++.|++.++  .|+|+++++|+|++|+||+++..+ ...++++|||++............+||+.|+||
T Consensus       145 ~l~~~~~~~i~~qi~~aL--~~LH~~givHrDlkp~NIll~~~~-~~~vkL~DFG~a~~~~~~~~~~~~~gt~~y~aP  219 (387)
T 1kob_A          145 KMSEAEVINYMRQACEGL--KHMHEHSIVHLDIKPENIMCETKK-ASSVKIIDFGLATKLNPDEIVKVTTATAEFAAP  219 (387)
T ss_dssp             CBCHHHHHHHHHHHHHHH--HHHHHTTEECCCCCGGGEEESSTT-CCCEEECCCTTCEECCTTSCEEEECSSGGGCCH
T ss_pred             CCCHHHHHHHHHHHHHHH--HHHHhCCeeecccchHHeEEecCC-CCceEEEecccceecCCCcceeeeccCCCccCc
Confidence            455 58899999999999  999999999999999999997532 357999999999987665555667899999998

>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*

Probab=99.62  E-value=4.2e-16  Score=99.32  Aligned_cols=72  Identities=17%  Similarity=0.349  Sum_probs=59.4

Q ss_pred             hcH-HHHHHHHHHHHHHHHHHHhhh-CCceecCCCCCceEeeeCCCCCcEEEEeeccceecC-CCccccccccccccccC
Q psy8010          11 RIP-RLVAKVTVTLLGSLNHHFTST-HSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLS-RDVDVREILGTPDYVGE   87 (87)
Q Consensus        11 ~~~-~~~~~~~~q~~~~l~~~~~h~-~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~-~~~~~~~~~gt~~y~aP   87 (87)
                      .++ +.+..++.|++.++  .|+|+ .+++|+|++|+|++++.+   ..+|++|||+++... ........+||+.|+||
T Consensus       244 ~~~~~~~~~~~~qi~~aL--~~LH~~~giiHrDlkp~NIll~~~---~~~kl~DFG~a~~~~~~~~~~~~~~gt~~y~aP  318 (446)
T 4ejn_A          244 VFSEDRARFYGAEIVSAL--DYLHSEKNVVYRDLKLENLMLDKD---GHIKITDFGLCKEGIKDGATMKTFCGTPEYLAP  318 (446)
T ss_dssp             CCCHHHHHHHHHHHHHHH--HHHHHHTCCCCCCCCGGGEEECSS---SCEEECCCCCCCTTCC-----CCSSSCGGGCCH
T ss_pred             CCCHHHHHHHHHHHHHHH--HHHhhcCCEEECCCCHHHEEECCC---CCEEEccCCCceeccCCCcccccccCCccccCH
Confidence            455 57899999999999  99998 999999999999999885   789999999998643 33344667999999998

>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7

Probab=99.62  E-value=6.1e-16  Score=95.20  Aligned_cols=70  Identities=21%  Similarity=0.449  Sum_probs=60.5

Q ss_pred             hcH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCccccccccccccccC
Q psy8010          11 RIP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDVDVREILGTPDYVGE   87 (87)
Q Consensus        11 ~~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~~~~~~~gt~~y~aP   87 (87)
                      .++ +.+..++.|++.++  .|+|+++++|+|++|+|++++.+   +.+|++|||++.....  .....+||+.|+||
T Consensus       102 ~~~~~~~~~~~~qi~~aL--~~LH~~~ivHrDlkp~NIll~~~---g~~kL~Dfg~a~~~~~--~~~~~~gt~~y~aP  172 (318)
T 1fot_A          102 RFPNPVAKFYAAEVCLAL--EYLHSKDIIYRDLKPENILLDKN---GHIKITDFGFAKYVPD--VTYTLCGTPDYIAP  172 (318)
T ss_dssp             SCCHHHHHHHHHHHHHHH--HHHHTTTEECCCCCGGGEEECTT---SCEEECCCSSCEECSS--CBCCCCSCTTTCCH
T ss_pred             CCCHHHHHHHHHHHHHHH--HHHHHCCccccCCChheEEEcCC---CCEEEeecCcceecCC--ccccccCCccccCH
Confidence            455 57889999999999  99999999999999999999875   7899999999987543  23456899999997

>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A

Probab=99.62  E-value=8.4e-16  Score=95.92  Aligned_cols=72  Identities=26%  Similarity=0.547  Sum_probs=63.9

Q ss_pred             hcH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCccccccccccccccC
Q psy8010          11 RIP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDVDVREILGTPDYVGE   87 (87)
Q Consensus        11 ~~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~~~~~~~gt~~y~aP   87 (87)
                      .++ +.+..++.|++.++  .|+|+.|++|+|++|.||+++.+   ..++++|||++..+.........+||+.|+||
T Consensus       196 ~l~~~~~~~i~~qi~~~L--~~LH~~gi~H~Dlkp~NIl~~~~---~~ikl~DfG~~~~~~~~~~~~~~~gt~~y~aP  268 (365)
T 2y7j_A          196 ALSEKETRSIMRSLLEAV--SFLHANNIVHRDLKPENILLDDN---MQIRLSDFGFSCHLEPGEKLRELCGTPGYLAP  268 (365)
T ss_dssp             SCCHHHHHHHHHHHHHHH--HHHHHTTEECSCCSGGGEEECTT---CCEEECCCTTCEECCTTCCBCCCCSCGGGCCH
T ss_pred             CCCHHHHHHHHHHHHHHH--HHHHhCCeecCCCCHHHEEECCC---CCEEEEecCcccccCCCcccccCCCCCCccCh
Confidence            344 57899999999999  99999999999999999999875   78999999999887766666778999999997

>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*

Probab=99.62  E-value=2.3e-16  Score=98.41  Aligned_cols=64  Identities=14%  Similarity=0.094  Sum_probs=53.9

Q ss_pred             HHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCccccccccccccccC
Q psy8010          17 AKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDVDVREILGTPDYVGE   87 (87)
Q Consensus        17 ~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~~~~~~~gt~~y~aP   87 (87)
                      ..++.|++.|+  .|+|+++++|+|+||+|++++.+   ..+|++|||+++.....  .....||+.|+||
T Consensus       197 ~~i~~qi~~aL--~~LH~~~ivHrDikp~NIll~~~---~~~kL~DFG~a~~~~~~--~~~~~~t~~y~aP  260 (371)
T 3q60_A          197 HILTAQLIRLA--ANLQSKGLVHGHFTPDNLFIMPD---GRLMLGDVSALWKVGTR--GPASSVPVTYAPR  260 (371)
T ss_dssp             HHHHHHHHHHH--HHHHHTTEEETTCSGGGEEECTT---SCEEECCGGGEEETTCE--EEGGGSCGGGCCH
T ss_pred             HHHHHHHHHHH--HHHHHCCCccCcCCHHHEEECCC---CCEEEEecceeeecCCC--ccCccCCcCCcCh
Confidence            46669999999  99999999999999999999985   78999999999875432  2245667999998

>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}

Probab=99.62  E-value=4.1e-16  Score=95.36  Aligned_cols=74  Identities=22%  Similarity=0.347  Sum_probs=62.2

Q ss_pred             cH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeC-CCCCcEEEEeeccceecCCCccccccccccccccC
Q psy8010          12 IP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGE-YPDCDVKLCDFGISRHLSRDVDVREILGTPDYVGE   87 (87)
Q Consensus        12 ~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~-~~~~~~kl~dfg~~~~~~~~~~~~~~~gt~~y~aP   87 (87)
                      ++ +.+..++.|++.++  .|+|+++++|+|++|+||++... +....+|++|||+++.+..........||+.|+||
T Consensus       109 ~~~~~~~~i~~qi~~~L--~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~kL~Dfg~a~~~~~~~~~~~~~gt~~y~aP  184 (319)
T 4euu_A          109 LPESEFLIVLRDVVGGM--NHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFVSLYGTEEYLHP  184 (319)
T ss_dssp             CCHHHHHHHHHHHHHHH--HHHHHTTEECSCCSGGGEEEEECTTSCEEEEECCCTTCEECCTTCCBCCCCSCGGGCCH
T ss_pred             CCHHHHHHHHHHHHHHH--HHHHHCCEecCCCCHHHEEEeccCCCCceEEEccCCCceecCCCCceeecccCCCccCH
Confidence            55 57899999999999  99999999999999999997322 12356999999999987666666677899999997

>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*

Probab=99.62  E-value=3.4e-16  Score=98.53  Aligned_cols=68  Identities=22%  Similarity=0.354  Sum_probs=56.2

Q ss_pred             HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCcc---ccccccccccccC
Q psy8010          14 RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDVD---VREILGTPDYVGE   87 (87)
Q Consensus        14 ~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~~---~~~~~gt~~y~aP   87 (87)
                      .++..++.|++.++  .|+|+++++|+|++|+||++..    ..+|++|||+++.+.....   ....+||+.|+||
T Consensus       155 ~~~~~i~~qi~~aL--~~lH~~~ivHrDlkp~NIll~~----~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aP  225 (390)
T 2zmd_A          155 WERKSYWKNMLEAV--HTIHQHGIVHSDLKPANFLIVD----GMLKLIDFGIANQMQPDTTSVVKDSQVGAVNYMPP  225 (390)
T ss_dssp             HHHHHHHHHHHHHH--HHHHTTTCCCCCCCGGGEEESS----SCEEECCCSSSCCC---------CCSCCCGGGCCH
T ss_pred             HHHHHHHHHHHHHH--HHHHHCCeeecCCCHHHEEEEC----CeEEEEecCccccccCCCccccCCCCCcCCCccCh
Confidence            57889999999999  9999999999999999999954    6799999999987643322   2456899999998

>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*

Probab=99.62  E-value=1.9e-16  Score=101.67  Aligned_cols=75  Identities=21%  Similarity=0.494  Sum_probs=64.3

Q ss_pred             hcH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCccccccccccccccC
Q psy8010          11 RIP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDVDVREILGTPDYVGE   87 (87)
Q Consensus        11 ~~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~~~~~~~gt~~y~aP   87 (87)
                      .++ ..+..++.|++.++  .|+|+++++|+|++|+|+++...+....+|++|||++..+.........+||+.|+||
T Consensus       122 ~~~~~~~~~i~~qi~~~l--~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aP  197 (484)
T 3nyv_A          122 RFSEVDAARIIRQVLSGI--TYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIAP  197 (484)
T ss_dssp             CCBHHHHHHHHHHHHHHH--HHHHHTTCCCSCCCGGGEEESSSSTTCCEEECCTTHHHHBCCCCSHHHHTTGGGTCCH
T ss_pred             CCCHHHHHHHHHHHHHHH--HHHHHCCeeeCCCCHHHEEEecCCCCCcEEEEeeeeeEEcccccccccCCCCccccCc
Confidence            345 57899999999999  9999999999999999999965433578999999999877666666677899999998

>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*

Probab=99.62  E-value=4.3e-16  Score=96.33  Aligned_cols=73  Identities=21%  Similarity=0.282  Sum_probs=61.2

Q ss_pred             hhcH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCC-----Cccccccccccc
Q psy8010          10 ARIP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSR-----DVDVREILGTPD   83 (87)
Q Consensus        10 ~~~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~-----~~~~~~~~gt~~   83 (87)
                      ..++ +.+..++.|++.++  .|+|++|++|+|++|+|++++.+   ..++++|||++..+..     ........||+.
T Consensus       119 ~~~~~~~~~~i~~qi~~~l--~~LH~~~ivH~Dlkp~NIl~~~~---~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~  193 (351)
T 3mi9_A          119 VKFTLSEIKRVMQMLLNGL--YYIHRNKILHRDMKAANVLITRD---GVLKLADFGLARAFSLAKNSQPNRYTNRVVTLW  193 (351)
T ss_dssp             SCCCHHHHHHHHHHHHHHH--HHHHHTTEECCCCSGGGEEECTT---SCEEECCCTTCEECCCCSSSSCCCCCSSCSCGG
T ss_pred             CCCCHHHHHHHHHHHHHHH--HHHHHCCeeCCCCCHHHEEEcCC---CCEEEccchhcccccccccccccccCCcccccC
Confidence            3455 58999999999999  99999999999999999999875   7899999999987642     122345688999


Q ss_pred             cccC
Q psy8010          84 YVGE   87 (87)
Q Consensus        84 y~aP   87 (87)
                      |+||
T Consensus       194 y~aP  197 (351)
T 3mi9_A          194 YRPP  197 (351)
T ss_dssp             GCCH
T ss_pred             ccCc
Confidence            9997

>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*

Probab=99.62  E-value=1.2e-15  Score=91.43  Aligned_cols=75  Identities=23%  Similarity=0.421  Sum_probs=64.1

Q ss_pred             hcH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCccccccccccccccC
Q psy8010          11 RIP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDVDVREILGTPDYVGE   87 (87)
Q Consensus        11 ~~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~~~~~~~gt~~y~aP   87 (87)
                      .++ +.+..++.|++.++  .++|+++++|+|++|.|+++..++.+..++++|||++..+..........||+.|+||
T Consensus       102 ~~~~~~~~~i~~~i~~~l--~~lH~~~i~H~dlkp~Nil~~~~~~~~~~~l~Dfg~~~~~~~~~~~~~~~~t~~y~aP  177 (277)
T 3f3z_A          102 VFRESDAARIMKDVLSAV--AYCHKLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMMRTKVGTPYYVSP  177 (277)
T ss_dssp             SCCHHHHHHHHHHHHHHH--HHHHHTTEECCCCSGGGEEESSSSTTCCEEECCCTTCEECCTTSCBCCCCSCTTTCCH
T ss_pred             CCCHHHHHHHHHHHHHHH--HHHHHCCccCCCCCHHHEEEecCCCCCcEEEEecccceeccCccchhccCCCCCccCh
Confidence            344 57899999999999  9999999999999999999954333578999999999887766666677899999997

>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*

Probab=99.62  E-value=5e-16  Score=95.33  Aligned_cols=74  Identities=16%  Similarity=0.284  Sum_probs=58.4

Q ss_pred             hhhcH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCcc---cccccccccc
Q psy8010           9 VARIP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDVD---VREILGTPDY   84 (87)
Q Consensus         9 ~~~~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~~---~~~~~gt~~y   84 (87)
                      .+.++ +.+..++.|++.++  .|+|+++++|+|+||+|++++.+   ..++++|||+++.+.....   .....|++.|
T Consensus       109 ~~~~~~~~~~~~~~qi~~~l--~~lH~~~ivH~Dikp~Nil~~~~---~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~y  183 (325)
T 3kex_A          109 RGALGPQLLLNWGVQIAKGM--YYLEEHGMVHRNLAARNVLLKSP---SQVQVADFGVADLLPPDDKQLLYSEAKTPIKW  183 (325)
T ss_dssp             GGGSCTTHHHHHHHHHHHHH--HHHHHTTCCCSCCSSTTEEESSS---SCEEECSCSGGGGSCCCTTCCC-----CCTTT
T ss_pred             cccCCHHHHHHHHHHHHHHH--HHHHhCCCCCCccchheEEECCC---CeEEECCCCcccccCcccccccccCCCCcccc
Confidence            34555 57899999999999  99999999999999999999875   7899999999987643322   2445778889


Q ss_pred             ccC
Q psy8010          85 VGE   87 (87)
Q Consensus        85 ~aP   87 (87)
                      +||
T Consensus       184 ~aP  186 (325)
T 3kex_A          184 MAL  186 (325)
T ss_dssp             SCH
T ss_pred             cCh
Confidence            987

>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*

Probab=99.62  E-value=7.9e-16  Score=94.73  Aligned_cols=72  Identities=18%  Similarity=0.250  Sum_probs=56.6

Q ss_pred             hcH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCC-CccccccccccccccC
Q psy8010          11 RIP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSR-DVDVREILGTPDYVGE   87 (87)
Q Consensus        11 ~~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~-~~~~~~~~gt~~y~aP   87 (87)
                      .++ +.+..++.|++.++  .|+|+++++|+|++|+|++++.+   ..+|++|||++..... .......+||+.|+||
T Consensus       117 ~~~~~~~~~~~~qi~~al--~~lH~~~ivH~Dlkp~Nill~~~---~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aP  190 (327)
T 3a62_A          117 IFMEDTACFYLAEISMAL--GHLHQKGIIYRDLKPENIMLNHQ---GHVKLTDFGLCKESIHDGTVTHTFCGTIEYMAP  190 (327)
T ss_dssp             SCCHHHHHHHHHHHHHHH--HHHHHTTCCCCCCCTTTEEECTT---SCEEECCCSCC----------CTTSSCCTTSCH
T ss_pred             CCCHHHHHHHHHHHHHHH--HHHHhCCEEcccCCHHHeEECCC---CcEEEEeCCcccccccCCccccccCCCcCccCH
Confidence            344 57889999999999  99999999999999999999875   7899999999876432 2233556899999997

>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A

Probab=99.62  E-value=7.3e-16  Score=94.88  Aligned_cols=75  Identities=19%  Similarity=0.293  Sum_probs=49.0

Q ss_pred             hcH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCC-ccccccccccccccC
Q psy8010          11 RIP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRD-VDVREILGTPDYVGE   87 (87)
Q Consensus        11 ~~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~-~~~~~~~gt~~y~aP   87 (87)
                      .++ +++..++.|++.++  .|+|+++++|+|++|+|+++..+++...++++|||++...... ......+||+.|+||
T Consensus       102 ~~~~~~~~~i~~qi~~~l--~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~t~~y~aP  178 (325)
T 3kn6_A          102 HFSETEASYIMRKLVSAV--SHMHDVGVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQPLKTPCFTLHYAAP  178 (325)
T ss_dssp             CCCHHHHHHHHHHHHHHH--HHHHHTTEECCCCCGGGEEEEC----CEEEECCCTTCEECCC-----------------
T ss_pred             CCCHHHHHHHHHHHHHHH--HHHHHCCCeecCCCHHHEEEecCCCcccEEEeccccceecCCCCCcccccCCCcCccCH
Confidence            355 57899999999999  9999999999999999999987643457999999999876433 234567899999998

>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}

Probab=99.62  E-value=5.8e-16  Score=98.05  Aligned_cols=68  Identities=15%  Similarity=0.154  Sum_probs=57.4

Q ss_pred             cH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCccccccccccccccC
Q psy8010          12 IP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDVDVREILGTPDYVGE   87 (87)
Q Consensus        12 ~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~~~~~~~gt~~y~aP   87 (87)
                      ++ +....++.|++.++  .|+|+++++|+|+||+||+++.+   ..+|++|||+++.....  ....+| +.|+||
T Consensus       208 l~~~~~~~i~~qi~~aL--~~LH~~~iiHrDiKp~NILl~~~---~~~kL~DFG~a~~~~~~--~~~~~g-~~y~aP  276 (413)
T 3dzo_A          208 LVHHARLQLTLQVIRLL--ASLHHYGLVHTYLRPVDIVLDQR---GGVFLTGFEHLVRDGAS--AVSPIG-RGFAPP  276 (413)
T ss_dssp             HHHHHHHHHHHHHHHHH--HHHHHTTEECSCCCGGGEEECTT---CCEEECCGGGCEETTEE--ECCCCC-TTTCCH
T ss_pred             CCHHHHHHHHHHHHHHH--HHHHhCCcccCCcccceEEEecC---CeEEEEeccceeecCCc--cccCCC-CceeCc
Confidence            44 35677789999999  99999999999999999999985   67999999998875432  455688 999997

>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B

Probab=99.62  E-value=7.6e-16  Score=100.77  Aligned_cols=72  Identities=17%  Similarity=0.344  Sum_probs=62.2

Q ss_pred             hcH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCcc-ccccccccccccC
Q psy8010          11 RIP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDVD-VREILGTPDYVGE   87 (87)
Q Consensus        11 ~~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~~-~~~~~gt~~y~aP   87 (87)
                      .++ +.+..++.|++.|+  .|+|+++++|+|+||+||+++.+   +.+|++|||+++.+..... ....+||+.|+||
T Consensus       285 ~l~e~~~~~~~~qi~~aL--~~LH~~gIvHrDLKP~NILl~~~---g~vkL~DFGla~~~~~~~~~~~~~~GT~~Y~AP  358 (543)
T 3c4z_A          285 GFQEPRAIFYTAQIVSGL--EHLHQRNIIYRDLKPENVLLDDD---GNVRISDLGLAVELKAGQTKTKGYAGTPGFMAP  358 (543)
T ss_dssp             SCCHHHHHHHHHHHHHHH--HHHHHTTEECCCCCGGGEEECTT---SCEEECCCTTCEECCTTCCCBCCCCSCTTTSCH
T ss_pred             cccHHHHHHHHHHHHHHH--HHHHHcCCcccCCChHHEEEeCC---CCEEEeecceeeeccCCCcccccccCCccccCh
Confidence            355 57889999999999  99999999999999999999885   7899999999998755443 3456999999998

>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...

Probab=99.61  E-value=4.4e-16  Score=97.22  Aligned_cols=73  Identities=16%  Similarity=0.339  Sum_probs=51.7

Q ss_pred             hhcH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCccccccccccccccC
Q psy8010          10 ARIP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDVDVREILGTPDYVGE   87 (87)
Q Consensus        10 ~~~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~~~~~~~gt~~y~aP   87 (87)
                      ..++ +.+..++.|++.|+  .|+|+++++|+|++|+|++++.+   ..+|++|||+++...........+||+.|+||
T Consensus       122 ~~~~~~~~~~i~~qi~~al--~~lH~~~ivH~Dlkp~NIl~~~~---~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aP  195 (371)
T 2xrw_A          122 MELDHERMSYLLYQMLCGI--KHLHSAGIIHRDLKPSNIVVKSD---CTLKILDFGLARTAGTSFMMTPYVVTRYYRAP  195 (371)
T ss_dssp             SCCCHHHHHHHHHHHHHHH--HHHHHTTCCCSCCCGGGEEECTT---SCEEECCCCC----------------CTTCCH
T ss_pred             hccCHHHHHHHHHHHHHHH--HHHHHCCeecccCCHHHEEEcCC---CCEEEEEeecccccccccccCCceecCCccCH
Confidence            3455 57889999999999  99999999999999999999985   78999999999876554445567899999997

>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7

Probab=99.61  E-value=7.5e-16  Score=95.79  Aligned_cols=72  Identities=21%  Similarity=0.301  Sum_probs=61.0

Q ss_pred             hcH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCc--cccccccccccccC
Q psy8010          11 RIP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDV--DVREILGTPDYVGE   87 (87)
Q Consensus        11 ~~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~--~~~~~~gt~~y~aP   87 (87)
                      .++ +.+..++.|++.++  .|+|+++++|+|++|.|++++.+   ..+|++|||+++.+....  .....+||+.|+||
T Consensus       155 ~~~~~~~~~~~~qi~~aL--~~LH~~~ivH~Dlkp~NIll~~~---~~~kl~DfG~a~~~~~~~~~~~~~~~gt~~y~aP  229 (355)
T 1vzo_A          155 RFTEHEVQIYVGEIVLAL--EHLHKLGIIYRDIKLENILLDSN---GHVVLTDFGLSKEFVADETERAYDFCGTIEYMAP  229 (355)
T ss_dssp             CCCHHHHHHHHHHHHHHH--HHHHHTTCCCCCCCGGGEEECTT---SCEEESCSSEEEECCGGGGGGGCGGGSCCTTCCH
T ss_pred             CCCHHHHHHHHHHHHHHH--HHHHHCCcccCCCCHHHEEECCC---CcEEEeeCCCCeecccCCCCcccCcccCcCccCh
Confidence            355 57889999999999  99999999999999999999875   789999999998764332  23456899999997

>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}

Probab=99.61  E-value=9.7e-16  Score=94.30  Aligned_cols=74  Identities=19%  Similarity=0.444  Sum_probs=63.2

Q ss_pred             cH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCC-CCCcEEEEeeccceecCCCccccccccccccccC
Q psy8010          12 IP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEY-PDCDVKLCDFGISRHLSRDVDVREILGTPDYVGE   87 (87)
Q Consensus        12 ~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~-~~~~~kl~dfg~~~~~~~~~~~~~~~gt~~y~aP   87 (87)
                      ++ +.+..++.|++.++  .|+|+++++|+|++|+|+++...+ +...++++|||++..+.........+||+.|+||
T Consensus       111 ~~~~~~~~i~~qi~~al--~~lH~~~ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aP  186 (326)
T 2y0a_A          111 LTEEEATEFLKQILNGV--YYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAP  186 (326)
T ss_dssp             CBHHHHHHHHHHHHHHH--HHHHHTTEECCCCCGGGEEESCSSSSSCCEEECCCTTCEECCTTSCCCCCCSCTTTCCH
T ss_pred             cCHHHHHHHHHHHHHHH--HHHHHCCeEcCCCCHHHEEEecCCCCCCCEEEEECCCCeECCCCCccccccCCcCcCCc
Confidence            45 58899999999999  999999999999999999998752 1237999999999987655556667899999998

>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}

Probab=99.61  E-value=1.3e-15  Score=92.38  Aligned_cols=71  Identities=17%  Similarity=0.367  Sum_probs=61.0

Q ss_pred             cH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCc-cccccccccccccC
Q psy8010          12 IP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDV-DVREILGTPDYVGE   87 (87)
Q Consensus        12 ~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~-~~~~~~gt~~y~aP   87 (87)
                      ++ +.+..++.|++.++  .|+|+++++|+|++|+|++++.+   ..+|++|||++..+.... ......||+.|+||
T Consensus       134 ~~~~~~~~~~~qi~~~l--~~lH~~~ivH~Dlkp~Nil~~~~---~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aP  206 (298)
T 2zv2_A          134 LSEDQARFYFQDLIKGI--EYLHYQKIIHRDIKPSNLLVGED---GHIKIADFGVSNEFKGSDALLSNTVGTPAFMAP  206 (298)
T ss_dssp             CCHHHHHHHHHHHHHHH--HHHHHTTEECCCCCGGGEEECTT---SCEEECCCTTCEECSSSSCEECCCCSCGGGCCG
T ss_pred             CCHHHHHHHHHHHHHHH--HHHHHCCeeccCCCHHHEEECCC---CCEEEecCCCccccccccccccCCcCCccccCh
Confidence            44 57899999999999  99999999999999999999875   789999999998775433 23456899999998

>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A

Probab=99.61  E-value=5.6e-16  Score=96.64  Aligned_cols=75  Identities=21%  Similarity=0.375  Sum_probs=52.6

Q ss_pred             hhcH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCccccccccccccccC
Q psy8010          10 ARIP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDVDVREILGTPDYVGE   87 (87)
Q Consensus        10 ~~~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~~~~~~~gt~~y~aP   87 (87)
                      ++++ +.+..++.|++.++  .|+|++|++|+|++|+|++++..+ ...+|++|||+++...........+||+.|+||
T Consensus       111 ~~~~~~~~~~i~~ql~~~L--~~LH~~~ivH~Dlkp~Nill~~~~-~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aP  186 (361)
T 3uc3_A          111 GRFSEDEARFFFQQLLSGV--SYCHSMQICHRDLKLENTLLDGSP-APRLKICDFGYSKSSVLHSQPKSTVGTPAYIAP  186 (361)
T ss_dssp             SSCCHHHHHHHHHHHHHHH--HHHHHTTCCSCCCCGGGEEECSSS-SCCEEECCCCCC---------------CTTSCH
T ss_pred             CCCCHHHHHHHHHHHHHHH--HHHHHCCcccCCCCHHHEEEcCCC-CceEEEeecCccccccccCCCCCCcCCCCcCCh
Confidence            3455 58999999999999  999999999999999999998642 235999999998865444444566899999997

>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*

Probab=99.61  E-value=1e-15  Score=93.08  Aligned_cols=71  Identities=23%  Similarity=0.403  Sum_probs=61.2

Q ss_pred             cH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCc-cccccccccccccC
Q psy8010          12 IP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDV-DVREILGTPDYVGE   87 (87)
Q Consensus        12 ~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~-~~~~~~gt~~y~aP   87 (87)
                      ++ +.+..++.|++.++  .|+|+++++|+|++|+|++++.+   ..++++|||++....... ......||+.|+||
T Consensus       113 ~~~~~~~~~~~qi~~~l--~~lH~~~i~H~Dlkp~Nil~~~~---~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aP  185 (297)
T 3fxz_A          113 MDEGQIAAVCRECLQAL--EFLHSNQVIHRDIKSDNILLGMD---GSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAP  185 (297)
T ss_dssp             CCHHHHHHHHHHHHHHH--HHHHHTTEECCCCSGGGEEECTT---CCEEECCCTTCEECCSTTCCBCCCCSCGGGCCH
T ss_pred             CCHHHHHHHHHHHHHHH--HHHHhCCceeCCCCHHHEEECCC---CCEEEeeCCCceecCCcccccCCccCCcCccCh
Confidence            44 57899999999999  99999999999999999999885   789999999998765433 33557899999997

>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}

Probab=99.61  E-value=1e-15  Score=93.48  Aligned_cols=68  Identities=21%  Similarity=0.362  Sum_probs=57.3

Q ss_pred             HHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCc-------------cccccccc
Q psy8010          15 LVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDV-------------DVREILGT   81 (87)
Q Consensus        15 ~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~-------------~~~~~~gt   81 (87)
                      .+..++.|++.++  .|+|+++++|+|+||.|++++.+   ..+|++|||++.......             .....+||
T Consensus       165 ~~~~i~~qi~~aL--~~LH~~~ivH~Dlkp~NIll~~~---~~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~gt  239 (332)
T 3qd2_B          165 VCLHIFIQIAEAV--EFLHSKGLMHRDLKPSNIFFTMD---DVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQVGT  239 (332)
T ss_dssp             HHHHHHHHHHHHH--HHHHHTTEECCCCCGGGEEECTT---CCEEECCCTTCEECSCC--------------CCCSCC-C
T ss_pred             HHHHHHHHHHHHH--HHHHhCCeeecCCCcccEEEeCC---CCEEEeecCcccccccchhhccccccccccccccccCCC
Confidence            4788999999999  99999999999999999999975   789999999998775432             22345899


Q ss_pred             cccccC
Q psy8010          82 PDYVGE   87 (87)
Q Consensus        82 ~~y~aP   87 (87)
                      +.|+||
T Consensus       240 ~~y~aP  245 (332)
T 3qd2_B          240 KLYMSP  245 (332)
T ss_dssp             GGGSCH
T ss_pred             cCccCh
Confidence            999997

>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}

Probab=99.61  E-value=5.3e-16  Score=95.87  Aligned_cols=71  Identities=24%  Similarity=0.363  Sum_probs=56.1

Q ss_pred             hcH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCcc---cccccccccccc
Q psy8010          11 RIP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDVD---VREILGTPDYVG   86 (87)
Q Consensus        11 ~~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~~---~~~~~gt~~y~a   86 (87)
                      .++ .++..++.|++.++  .|+|+++++|+|++|+||++..    ..+|++|||++..+.....   ....+||+.|+|
T Consensus       104 ~~~~~~~~~i~~qi~~al--~~lH~~~iiHrDikp~NIll~~----~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~a  177 (343)
T 3dbq_A          104 SIDPWERKSYWKNMLEAV--HTIHQHGIVHSDLKPANFLIVD----GMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMP  177 (343)
T ss_dssp             CCCHHHHHHHHHHHHHHH--HHHHHTTCCCCCCCGGGEEEET----TEEEECCCSSSCCC------------CCCCSSCC
T ss_pred             CCCHHHHHHHHHHHHHHH--HHHHhCCeecCCCCcceEEEEC----CcEEEeecccccccCcccccccCCCCcCCcCcCC
Confidence            344 57899999999999  9999999999999999999974    6799999999987643332   235689999999


Q ss_pred             C
Q psy8010          87 E   87 (87)
Q Consensus        87 P   87 (87)
                      |
T Consensus       178 P  178 (343)
T 3dbq_A          178 P  178 (343)
T ss_dssp             H
T ss_pred             H
Confidence            8

>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}

Probab=99.61  E-value=7.6e-16  Score=93.00  Aligned_cols=75  Identities=19%  Similarity=0.413  Sum_probs=57.4

Q ss_pred             hcH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCccccccccccccccC
Q psy8010          11 RIP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDVDVREILGTPDYVGE   87 (87)
Q Consensus        11 ~~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~~~~~~~gt~~y~aP   87 (87)
                      .++ +.+..++.|++.++  .++|+++++|+|++|.|+++...+....++++|||++..+..........||+.|+||
T Consensus       120 ~~~~~~~~~i~~qi~~~L--~~LH~~~ivH~dikp~NIl~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~t~~y~aP  195 (285)
T 3is5_A          120 ALSEGYVAELMKQMMNAL--AYFHSQHVVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKSDEHSTNAAGTALYMAP  195 (285)
T ss_dssp             CCCHHHHHHHHHHHHHHH--HHHHHTTCCCCCCSGGGEEESSSSTTCCEEECCCCCCCC----------CTTGGGCCH
T ss_pred             CCCHHHHHHHHHHHHHHH--HHHHhCCEEECCCCHHHEEEecCCCCCCEEEEeeecceecCCcccCcCcccccCcCCh
Confidence            355 57899999999999  9999999999999999999965433577999999999876555555667899999997

>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*

Probab=99.61  E-value=1.3e-15  Score=93.24  Aligned_cols=71  Identities=25%  Similarity=0.334  Sum_probs=60.5

Q ss_pred             cH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCC-ccccccccccccccC
Q psy8010          12 IP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRD-VDVREILGTPDYVGE   87 (87)
Q Consensus        12 ~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~-~~~~~~~gt~~y~aP   87 (87)
                      ++ +.+..++.|++.++  .|+|++|++|+|++|+||+++.+   ..+|++|||++...... .......||+.|+||
T Consensus       105 ~~~~~~~~~~~qi~~aL--~~lH~~~ivH~Dlkp~NIl~~~~---~~~kl~Dfg~~~~~~~~~~~~~~~~~t~~y~aP  177 (317)
T 2pmi_A          105 LELNLVKYFQWQLLQGL--AFCHENKILHRDLKPQNLLINKR---GQLKLGDFGLARAFGIPVNTFSSEVVTLWYRAP  177 (317)
T ss_dssp             CCHHHHHHHHHHHHHHH--HHHHHTTEECCCCCGGGEEECTT---CCEEECCCSSCEETTSCCCCCCCCCSCCTTCCH
T ss_pred             CCHHHHHHHHHHHHHHH--HHHHHCCeeeCCCChHHeEEcCC---CCEEECcCccceecCCCcccCCCCcccccccCc
Confidence            44 57888999999999  99999999999999999999885   78999999999876433 233456899999997

>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*

Probab=99.60  E-value=2.4e-15  Score=90.39  Aligned_cols=74  Identities=22%  Similarity=0.407  Sum_probs=63.6

Q ss_pred             cH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCccccccccccccccC
Q psy8010          12 IP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDVDVREILGTPDYVGE   87 (87)
Q Consensus        12 ~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~~~~~~~gt~~y~aP   87 (87)
                      ++ +.+..++.|++.++  .++|+++++|+|++|+|++++.++....++++|||++.............||+.|+||
T Consensus       102 ~~~~~~~~~~~~i~~~l--~~lH~~~i~H~dikp~Nil~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~y~aP  176 (284)
T 3kk8_A          102 YSEADASHCIQQILESI--AYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSP  176 (284)
T ss_dssp             CCHHHHHHHHHHHHHHH--HHHHHTTEECSCCCGGGEEESSSSTTCCEEECCCTTCEECCSSCBCCCSCSCGGGCCH
T ss_pred             CCHHHHHHHHHHHHHHH--HHHHHCCcCcCCCCHHHEEEecCCCCCcEEEeeceeeEEcccCccccCCCCCcCCcCc
Confidence            44 57889999999999  9999999999999999999987643456999999999887666555667899999997

>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...

Probab=99.60  E-value=5e-16  Score=95.47  Aligned_cols=79  Identities=13%  Similarity=0.206  Sum_probs=61.2

Q ss_pred             HHHHHhhhcH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCccc---cccc
Q psy8010           4 FIITLVARIP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDVDV---REIL   79 (87)
Q Consensus         4 ~~~~~~~~~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~~~---~~~~   79 (87)
                      ++......++ +.+..++.|++.++  .|+|+++++|+|+||+|++++.+   ..+|++|||+++.+......   ....
T Consensus       106 ~l~~~~~~~~~~~~~~~~~qi~~~l--~~LH~~~ivH~Dikp~NIll~~~---~~~kl~Dfg~a~~~~~~~~~~~~~~~~  180 (327)
T 3poz_A          106 YVREHKDNIGSQYLLNWCVQIAKGM--NYLEDRRLVHRDLAARNVLVKTP---QHVKITDFGLAKLLGAEEKEYHAEGGK  180 (327)
T ss_dssp             HHHHSTTSCCHHHHHHHHHHHHHHH--HHHHHTTCCCSCCCGGGEEEEET---TEEEECCTTHHHHHTTTCC-------C
T ss_pred             HHHhcCCCCCHHHHHHHHHHHHHHH--HHHhhCCeeCCCCChheEEECCC---CCEEEccCcceeEccCCcccccccCCC
Confidence            3444344556 57899999999999  99999999999999999999985   78999999999876433322   2346


Q ss_pred             cccccccC
Q psy8010          80 GTPDYVGE   87 (87)
Q Consensus        80 gt~~y~aP   87 (87)
                      ||+.|+||
T Consensus       181 ~t~~y~aP  188 (327)
T 3poz_A          181 VPIKWMAL  188 (327)
T ss_dssp             CCGGGSCH
T ss_pred             ccccccCh
Confidence            67889987

>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*

Probab=99.60  E-value=1.9e-15  Score=90.60  Aligned_cols=72  Identities=21%  Similarity=0.343  Sum_probs=62.7

Q ss_pred             hcH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCccccccccccccccC
Q psy8010          11 RIP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDVDVREILGTPDYVGE   87 (87)
Q Consensus        11 ~~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~~~~~~~gt~~y~aP   87 (87)
                      .++ +.+..++.|++.++  .++|+++++|+|++|.|++++.+   ..++++|||++.............|++.|+||
T Consensus       118 ~~~~~~~~~i~~qi~~~l--~~lH~~~i~H~dlkp~Nil~~~~---~~~kl~Dfg~~~~~~~~~~~~~~~~~~~y~aP  190 (284)
T 2a19_B          118 KLDKVLALELFEQITKGV--DYIHSKKLINRDLKPSNIFLVDT---KQVKIGDFGLVTSLKNDGKRTRSKGTLRYMSP  190 (284)
T ss_dssp             CCCHHHHHHHHHHHHHHH--HHHHHTTEECSCCSGGGEEEEET---TEEEECCCTTCEESSCCSCCCCCCSCCTTSCH
T ss_pred             CCCHHHHHHHHHHHHHHH--HHHHhCCeeeccCCHHHEEEcCC---CCEEECcchhheeccccccccccCCcccccCh
Confidence            344 57889999999999  99999999999999999999985   78999999999887665555666899999987

>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}

Probab=99.60  E-value=8.1e-16  Score=94.46  Aligned_cols=78  Identities=23%  Similarity=0.236  Sum_probs=57.5

Q ss_pred             HHHHhhhcH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCC-cccccccccc
Q psy8010           5 IITLVARIP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRD-VDVREILGTP   82 (87)
Q Consensus         5 ~~~~~~~~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~-~~~~~~~gt~   82 (87)
                      +......++ +.+..++.|++.++  .|+|++|++|+|++|+|++++.+   ..++++|||++...... .......||+
T Consensus        90 ~~~~~~~~~~~~~~~~~~qi~~aL--~~LH~~~ivH~Dikp~NIl~~~~---~~~kl~Dfg~a~~~~~~~~~~~~~~~t~  164 (324)
T 3mtl_A           90 LDDCGNIINMHNVKLFLFQLLRGL--AYCHRQKVLHRDLKPQNLLINER---GELKLADFGLARAKSIPTKTYDNEVVTL  164 (324)
T ss_dssp             HHHTTTCCCHHHHHHHHHHHHHHH--HHHHHTTEEESSCCGGGEEECTT---CCEEECSSSEEECC------------CG
T ss_pred             HHhcCCCCCHHHHHHHHHHHHHHH--HHHHHCCccCCCcCHHHEEECCC---CCEEEccCcccccccCCccccccccCcc
Confidence            333333455 57889999999999  99999999999999999999885   78999999999865432 2334568899


Q ss_pred             ccccC
Q psy8010          83 DYVGE   87 (87)
Q Consensus        83 ~y~aP   87 (87)
                      .|+||
T Consensus       165 ~y~aP  169 (324)
T 3mtl_A          165 WYRPP  169 (324)
T ss_dssp             GGCCH
T ss_pred             cccCh
Confidence            99997

>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A

Probab=99.60  E-value=2.9e-16  Score=94.87  Aligned_cols=73  Identities=19%  Similarity=0.313  Sum_probs=57.2

Q ss_pred             hhcH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCC-ccccccccccccccC
Q psy8010          10 ARIP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRD-VDVREILGTPDYVGE   87 (87)
Q Consensus        10 ~~~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~-~~~~~~~gt~~y~aP   87 (87)
                      +.++ ..+..++.|++.++  .|+|+++++|+|++|+|++++.+   ..+|++|||++...... .......||+.|+||
T Consensus        95 ~~~~~~~~~~~~~qi~~~l--~~lH~~~i~H~dlkp~Nil~~~~---~~~kl~Dfg~~~~~~~~~~~~~~~~~t~~y~aP  169 (288)
T 1ob3_A           95 GGLESVTAKSFLLQLLNGI--AYCHDRRVLHRDLKPQNLLINRE---GELKIADFGLARAFGIPVRKYTHEIVTLWYRAP  169 (288)
T ss_dssp             TCCCHHHHHHHHHHHHHHH--HHHHHTTCCCSCCCGGGEEECTT---SCEEECCTTHHHHHCC---------CCCTTCCH
T ss_pred             cCCCHHHHHHHHHHHHHHH--HHHHHCCeecCCCCHHHEEEcCC---CCEEEeECccccccCccccccccccccccccCc
Confidence            3455 57899999999999  99999999999999999999875   78999999998765432 233456889999997

>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*

Probab=99.60  E-value=1.3e-15  Score=93.59  Aligned_cols=75  Identities=29%  Similarity=0.607  Sum_probs=58.4

Q ss_pred             hcH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCccccccccccccccC
Q psy8010          11 RIP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDVDVREILGTPDYVGE   87 (87)
Q Consensus        11 ~~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~~~~~~~gt~~y~aP   87 (87)
                      .++ +.+..++.|++.++  .++|+++++|+|++|+|++++...+...++++|||++.............||+.|+||
T Consensus       127 ~~~~~~~~~i~~ql~~~L--~~LH~~givH~Dikp~NIl~~~~~~~~~~kL~Dfg~a~~~~~~~~~~~~~gt~~y~aP  202 (327)
T 3lm5_A          127 MVSENDVIRLIKQILEGV--YYLHQNNIVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKIGHACELREIMGTPEYLAP  202 (327)
T ss_dssp             CCCHHHHHHHHHHHHHHH--HHHHHTTEECSCCCGGGEEESCBTTBCCEEECCGGGCEEC---------CCCGGGCCH
T ss_pred             CCCHHHHHHHHHHHHHHH--HHHHHCCeecCcCChHHEEEecCCCCCcEEEeeCccccccCCccccccccCCcCccCC
Confidence            344 57899999999999  9999999999999999999987433468999999999987655555667899999997

>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}

Probab=99.59  E-value=1e-15  Score=94.21  Aligned_cols=79  Identities=13%  Similarity=0.206  Sum_probs=56.5

Q ss_pred             HHHHHhhhcH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCccc---cccc
Q psy8010           4 FIITLVARIP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDVDV---REIL   79 (87)
Q Consensus         4 ~~~~~~~~~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~~~---~~~~   79 (87)
                      ++......++ +.+..++.|++.++  .|+|+++++|+|+||+|++++.+   ..++++|||+++........   ....
T Consensus       106 ~l~~~~~~~~~~~~~~i~~qi~~aL--~~LH~~~ivH~Dikp~NIl~~~~---~~~kL~DfG~a~~~~~~~~~~~~~~~~  180 (327)
T 3lzb_A          106 YVREHKDNIGSQYLLNWCVQIAKGM--NYLEDRRLVHRDLAARNVLVKTP---QHVKITDFGLAKLLGAEEKEYHAEGGK  180 (327)
T ss_dssp             HHHHTTTCCCHHHHHHHHHHHHHHH--HHHHHTTCCCSCCCGGGEEEEET---TEEEECCTTC----------------C
T ss_pred             HHHhcCCCCCHHHHHHHHHHHHHHH--HHHhhCCCcCCCCCHHHEEEcCC---CCEEEccCcceeEccCccccccccCCC
Confidence            3444444566 57899999999999  99999999999999999999885   78999999999876433222   3345


Q ss_pred             cccccccC
Q psy8010          80 GTPDYVGE   87 (87)
Q Consensus        80 gt~~y~aP   87 (87)
                      ||+.|+||
T Consensus       181 ~t~~y~aP  188 (327)
T 3lzb_A          181 VPIKWMAL  188 (327)
T ss_dssp             CCGGGSCH
T ss_pred             ccccccCH
Confidence            67789987

>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}

Probab=99.59  E-value=1.1e-15  Score=94.88  Aligned_cols=74  Identities=24%  Similarity=0.481  Sum_probs=51.8

Q ss_pred             cH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCccccccccccccccC
Q psy8010          12 IP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDVDVREILGTPDYVGE   87 (87)
Q Consensus        12 ~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~~~~~~~gt~~y~aP   87 (87)
                      ++ +++..++.|++.++  .|+|+++++|+|++|+|++++..+++..++++|||+++...........+||+.|+||
T Consensus       145 ~~~~~~~~i~~qi~~~L--~~LH~~~ivH~Dikp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aP  219 (349)
T 2w4o_A          145 YSERDAADAVKQILEAV--AYLHENGIVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQVLMKTVCGTPGYCAP  219 (349)
T ss_dssp             CCHHHHHHHHHHHHHHH--HHHHHTTCCCCCCCGGGEEESSSSTTCCEEECCCC----------------CGGGSCH
T ss_pred             CCHHHHHHHHHHHHHHH--HHHHHCCeEecCCCcccEEEecCCCCCCEEEccCccccccCcccccccccCCCCccCH
Confidence            44 57899999999999  9999999999999999999986433478999999999876554445567899999997

>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A

Probab=99.59  E-value=1.9e-15  Score=94.49  Aligned_cols=66  Identities=15%  Similarity=0.127  Sum_probs=56.4

Q ss_pred             HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCccccccccccccccC
Q psy8010          14 RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDVDVREILGTPDYVGE   87 (87)
Q Consensus        14 ~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~~~~~~~gt~~y~aP   87 (87)
                      +.+..++.|++.|+  .|+|+++++|+|+||+||+++.+   ..+|++|||+++...  ......+| +.|+||
T Consensus       206 ~~~~~i~~qi~~aL--~~LH~~~ivHrDikp~NIll~~~---~~~kL~DFG~a~~~~--~~~~~~~g-~~y~aP  271 (377)
T 3byv_A          206 HARLQLTLQVIRLL--ASLHHYGLVHTYLRPVDIVLDQR---GGVFLTGFEHLVRDG--ARVVSSVS-RGFEPP  271 (377)
T ss_dssp             HHHHHHHHHHHHHH--HHHHHTTEECSCCCGGGEEECTT---CCEEECCGGGCEETT--CEEECCCC-TTCCCH
T ss_pred             HHHHHHHHHHHHHH--HHHHhCCeecCCCCHHHEEEcCC---CCEEEEechhheecC--CcccCCCC-cCccCh
Confidence            35667999999999  99999999999999999999975   789999999998643  23455678 999998

>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...

Probab=99.59  E-value=7.1e-16  Score=96.46  Aligned_cols=70  Identities=21%  Similarity=0.469  Sum_probs=50.5

Q ss_pred             hcH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCccccccccccccccC
Q psy8010          11 RIP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDVDVREILGTPDYVGE   87 (87)
Q Consensus        11 ~~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~~~~~~~gt~~y~aP   87 (87)
                      .++ +.+..++.|++.++  .|+|+.|++|+|++|+|++++.+   ..+|++|||+++....  .....+||++|+||
T Consensus       128 ~l~~~~~~~i~~qi~~aL--~~LH~~givH~Dlkp~NIll~~~---~~~kL~DFG~a~~~~~--~~~~~~~t~~y~aP  198 (367)
T 2fst_X          128 KLTDDHVQFLIYQILRGL--KYIHSADIIHRDLKPSNLAVNED---CELKILDFGLARHTAD--EMTGYVATRWYRAP  198 (367)
T ss_dssp             CCCHHHHHHHHHHHHHHH--HHHHHTTCCCCCCCGGGEEECTT---CCEEECC-----------------CCCTTCCH
T ss_pred             CCCHHHHHHHHHHHHHHH--HHHHHCCeeeCCCCHhhEEECCC---CCEEEeeccccccccc--cCCCcCcCcCccCh
Confidence            455 57899999999999  99999999999999999999885   7899999999986532  23456899999997

>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*

Probab=99.59  E-value=5.9e-16  Score=95.96  Aligned_cols=72  Identities=19%  Similarity=0.338  Sum_probs=52.3

Q ss_pred             hcH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCccccccccccccccC
Q psy8010          11 RIP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDVDVREILGTPDYVGE   87 (87)
Q Consensus        11 ~~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~~~~~~~gt~~y~aP   87 (87)
                      .++ +.+..++.|++.++  .|+|+++++|+|++|+|++++.+   ..++++|||++.............||+.|+||
T Consensus       130 ~~~~~~~~~~~~qi~~~l--~~lH~~~ivH~Dlkp~NIl~~~~---~~~kl~Dfg~~~~~~~~~~~~~~~~t~~y~aP  202 (362)
T 3pg1_A          130 VISPQHIQYFMYHILLGL--HVLHEAGVVHRDLHPGNILLADN---NDITICDFNLAREDTADANKTHYVTHRWYRAP  202 (362)
T ss_dssp             CCCHHHHHHHHHHHHHHH--HHHHHTTCCCCCCCGGGEEECTT---CCEEECCTTC---------------CGGGCCH
T ss_pred             CCCHHHHHHHHHHHHHHH--HHHHHCcCEecCCChHHEEEcCC---CCEEEEecCcccccccccccceecccceecCc
Confidence            355 57899999999999  99999999999999999999875   78999999999866555555667899999987

>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}

Probab=99.59  E-value=1.1e-15  Score=92.73  Aligned_cols=72  Identities=22%  Similarity=0.427  Sum_probs=55.4

Q ss_pred             hcH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCc--cccccccccccccC
Q psy8010          11 RIP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDV--DVREILGTPDYVGE   87 (87)
Q Consensus        11 ~~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~--~~~~~~gt~~y~aP   87 (87)
                      .++ +.+..++.|++.++  .++|+++++|+|++|+|++++.+   ..++++|||++.......  ......||+.|+||
T Consensus       107 ~~~~~~~~~~~~qi~~~l--~~lH~~~i~H~Dlkp~Nil~~~~---~~~kl~Dfg~~~~~~~~~~~~~~~~~gt~~y~aP  181 (294)
T 4eqm_A          107 PLSVDTAINFTNQILDGI--KHAHDMRIVHRDIKPQNILIDSN---KTLKIFDFGIAKALSETSLTQTNHVLGTVQYFSP  181 (294)
T ss_dssp             SCCHHHHHHHHHHHHHHH--HHHHHTTCCCCCCCGGGEEECTT---SCEEECCCSSSTTC-------------CCSSCCH
T ss_pred             CCCHHHHHHHHHHHHHHH--HHHHHCCcccCCCCHHHEEECCC---CCEEEEeCCCccccccccccccCccccCccccCH
Confidence            355 57899999999999  99999999999999999999875   789999999987654332  22446899999997

>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A

Probab=99.59  E-value=2.3e-15  Score=93.43  Aligned_cols=75  Identities=17%  Similarity=0.335  Sum_probs=61.1

Q ss_pred             hcH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCC-CCCcEEEEeeccceecCCC-ccccccccccccccC
Q psy8010          11 RIP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEY-PDCDVKLCDFGISRHLSRD-VDVREILGTPDYVGE   87 (87)
Q Consensus        11 ~~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~-~~~~~kl~dfg~~~~~~~~-~~~~~~~gt~~y~aP   87 (87)
                      .++ +.+..++.|++.++  .|+|++|++|+|++|+|+++...+ ....+|++|||++...... ....+.+||+.|+||
T Consensus       112 ~~~~~~~~~~~~qi~~al--~~lH~~givHrDlkp~NIl~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~gt~~y~aP  189 (342)
T 2qr7_A          112 FFSEREASAVLFTITKTV--EYLHAQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLMTPCYTANFVAP  189 (342)
T ss_dssp             TCCHHHHHHHHHHHHHHH--HHHHHTTEECSCCCGGGEEESSSSCSGGGEEECCCTTCEECBCTTCCBCCSSCCSSCCCH
T ss_pred             CCCHHHHHHHHHHHHHHH--HHHHHCCcEeccCCHHHEEEecCCCCcCeEEEEECCCcccCcCCCCceeccCCCccccCH
Confidence            355 58899999999999  999999999999999999986542 1235999999999876433 334567999999998

>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*

Probab=99.59  E-value=3.6e-15  Score=90.27  Aligned_cols=79  Identities=14%  Similarity=0.260  Sum_probs=63.8

Q ss_pred             HHHHHhhhcH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCcc----cccc
Q psy8010           4 FIITLVARIP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDVD----VREI   78 (87)
Q Consensus         4 ~~~~~~~~~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~~----~~~~   78 (87)
                      ++......++ +.+..++.|++.++  .++|+++++|+|++|+|++++.+   ..++++|||++........    ....
T Consensus       115 ~l~~~~~~~~~~~~~~~~~~i~~~l--~~lH~~~i~H~dikp~Nil~~~~---~~~kl~Dfg~~~~~~~~~~~~~~~~~~  189 (302)
T 4e5w_A          115 YLPKNKNKINLKQQLKYAVQICKGM--DYLGSRQYVHRDLAARNVLVESE---HQVKIGDFGLTKAIETDKEYYTVKDDR  189 (302)
T ss_dssp             HHHHHTTTCCHHHHHHHHHHHHHHH--HHHHHTTEECSCCSGGGEEEEET---TEEEECCCTTCEECCTTCCEEECCCCT
T ss_pred             HHHhccccCCHHHHHHHHHHHHHHH--HHhhcCCcccCCCchheEEEcCC---CCEEECcccccccccCCCcceeccCCC
Confidence            4444444566 57889999999999  99999999999999999999985   7899999999987754432    2345


Q ss_pred             ccccccccC
Q psy8010          79 LGTPDYVGE   87 (87)
Q Consensus        79 ~gt~~y~aP   87 (87)
                      .||+.|+||
T Consensus       190 ~~~~~y~aP  198 (302)
T 4e5w_A          190 DSPVFWYAP  198 (302)
T ss_dssp             TCCGGGCCH
T ss_pred             CCCccccCC
Confidence            788889987

>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...

Probab=99.59  E-value=1.7e-15  Score=91.64  Aligned_cols=79  Identities=16%  Similarity=0.241  Sum_probs=58.8

Q ss_pred             HHHHHhhhcH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCcc----cccc
Q psy8010           4 FIITLVARIP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDVD----VREI   78 (87)
Q Consensus         4 ~~~~~~~~~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~~----~~~~   78 (87)
                      ++.....+++ ..+..++.|++.++  .|+|+++++|+|++|+|++++.+   ..++++|||++........    ....
T Consensus       103 ~l~~~~~~~~~~~~~~~~~qi~~~l--~~lH~~~ivH~Dikp~Nil~~~~---~~~kl~Dfg~~~~~~~~~~~~~~~~~~  177 (295)
T 3ugc_A          103 YLQKHKERIDHIKLLQYTSQICKGM--EYLGTKRYIHRDLATRNILVENE---NRVKIGDFGLTKVLPQDKEFFKVKEPG  177 (295)
T ss_dssp             HHHHCGGGCCHHHHHHHHHHHHHHH--HHHHHTTCCCSCCSGGGEEEEET---TEEEECCCCSCC-------------CT
T ss_pred             HHHhcccccCHHHHHHHHHHHHHHH--HHHhcCCcccCCCCHhhEEEcCC---CeEEEccCcccccccCCcceeeeccCC
Confidence            3434344466 57889999999999  99999999999999999999985   7899999999987643321    2334


Q ss_pred             ccccccccC
Q psy8010          79 LGTPDYVGE   87 (87)
Q Consensus        79 ~gt~~y~aP   87 (87)
                      .|++.|+||
T Consensus       178 ~~~~~y~aP  186 (295)
T 3ugc_A          178 ESPIFWYAP  186 (295)
T ss_dssp             TCGGGGCCH
T ss_pred             CCccceeCc
Confidence            677789987

>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}

Probab=99.58  E-value=2.7e-15  Score=92.78  Aligned_cols=70  Identities=21%  Similarity=0.343  Sum_probs=61.4

Q ss_pred             HHHHHHHHHHHHHHHHHHhh--hCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCccccccccccccccC
Q psy8010          14 RLVAKVTVTLLGSLNHHFTS--THSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDVDVREILGTPDYVGE   87 (87)
Q Consensus        14 ~~~~~~~~q~~~~l~~~~~h--~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~~~~~~~gt~~y~aP   87 (87)
                      ..+..++.|++.++  .++|  +.+++|+|++|+||+++..  +..++++|||++..+..........||+.|+||
T Consensus       129 ~~~~~~~~qi~~al--~~lH~~~~~ivH~Dlkp~NIll~~~--~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aP  200 (360)
T 3e3p_A          129 ILIKVFLFQLIRSI--GCLHLPSVNVCHRDIKPHNVLVNEA--DGTLKLCDFGSAKKLSPSEPNVAYICSRYYRAP  200 (360)
T ss_dssp             HHHHHHHHHHHHHH--HHHTSTTTCCBCSCCCGGGEEEETT--TTEEEECCCTTCBCCCTTSCCCSTTSCGGGCCH
T ss_pred             HHHHHHHHHHHHHH--HHHhCCCCCeecCcCCHHHEEEeCC--CCcEEEeeCCCceecCCCCCcccccCCcceeCH
Confidence            46888999999999  9999  9999999999999999863  378999999999887666556677899999997

>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}

Probab=99.58  E-value=1.4e-15  Score=94.99  Aligned_cols=74  Identities=15%  Similarity=0.170  Sum_probs=59.8

Q ss_pred             cH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCC---ccccccccccccccC
Q psy8010          12 IP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRD---VDVREILGTPDYVGE   87 (87)
Q Consensus        12 ~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~---~~~~~~~gt~~y~aP   87 (87)
                      ++ ..+..++.|++.++  .|+|+++++|+|+||+||+++.++....+|++|||+++.+...   .......||+.|+||
T Consensus       178 ~~~~~~~~i~~qi~~aL--~~LH~~~ivHrDlkp~NIll~~~~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aP  255 (367)
T 3l9p_A          178 LAMLDLLHVARDIACGC--QYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLPVKWMPP  255 (367)
T ss_dssp             CCHHHHHHHHHHHHHHH--HHHHHTTCCCSCCCGGGEEESCSSTTCCEEECCCHHHHHHHHHSSCTTCCGGGSCGGGCCH
T ss_pred             ccHHHHHHHHHHHHHHH--HHHHhCCeeCCCCChhhEEEecCCCCceEEECCCccccccccccccccCCCcCCcccEECH
Confidence            44 57889999999999  9999999999999999999997544456999999999754221   223446788999997

>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7

Probab=99.58  E-value=6.8e-16  Score=95.50  Aligned_cols=71  Identities=20%  Similarity=0.297  Sum_probs=60.6

Q ss_pred             cH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCc-cccccccccccccC
Q psy8010          12 IP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDV-DVREILGTPDYVGE   87 (87)
Q Consensus        12 ~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~-~~~~~~gt~~y~aP   87 (87)
                      ++ +.+..++.|++.++  .|+|+++++|+|++|+|++++.+   ..+|++|||++..+.... .....+||+.|+||
T Consensus       109 ~~~~~~~~~~~qi~~~l--~~lH~~~ivH~Dlkp~Nil~~~~---~~~kl~Dfg~a~~~~~~~~~~~~~~~t~~y~aP  181 (346)
T 1ua2_A          109 LTPSHIKAYMLMTLQGL--EYLHQHWILHRDLKPNNLLLDEN---GVLKLADFGLAKSFGSPNRAYTHQVVTRWYRAP  181 (346)
T ss_dssp             CCSSHHHHHHHHHHHHH--HHHHHTTCCCCCCCGGGEEECTT---CCEEECCCGGGSTTTSCCCCCCCSCCCCTTCCH
T ss_pred             CCHHHHHHHHHHHHHHH--HHHHHCCEECCCCCHHHEEEcCC---CCEEEEecccceeccCCcccCCcccccccccCc
Confidence            44 57899999999999  99999999999999999999885   789999999998764332 33556899999997

>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*

Probab=99.58  E-value=1.7e-15  Score=91.12  Aligned_cols=72  Identities=15%  Similarity=0.180  Sum_probs=49.6

Q ss_pred             hcH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCccc--cccccccccccC
Q psy8010          11 RIP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDVDV--REILGTPDYVGE   87 (87)
Q Consensus        11 ~~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~~~--~~~~gt~~y~aP   87 (87)
                      .++ +.+..++.|++.++  .++|+++++|+|++|+|++++.+   ..++++|||++.........  ....+++.|+||
T Consensus       112 ~~~~~~~~~~~~qi~~~l--~~lH~~~i~H~dlkp~Nil~~~~---~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~y~aP  186 (281)
T 1mp8_A          112 SLDLASLILYAYQLSTAL--AYLESKRFVHRDIAARNVLVSSN---DCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAP  186 (281)
T ss_dssp             TSCHHHHHHHHHHHHHHH--HHHHHTTCCCSCCSGGGEEEEET---TEEEECC-------------------CCGGGCCH
T ss_pred             CCCHHHHHHHHHHHHHHH--HHHHhCCeecccccHHHEEECCC---CCEEECccccccccCcccccccccCCCcccccCh
Confidence            455 57889999999999  99999999999999999999985   78999999999876433322  334667889987

>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*

Probab=99.58  E-value=2.6e-15  Score=93.28  Aligned_cols=71  Identities=24%  Similarity=0.356  Sum_probs=60.4

Q ss_pred             hhhcH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCccccccccccccccC
Q psy8010           9 VARIP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDVDVREILGTPDYVGE   87 (87)
Q Consensus         9 ~~~~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~~~~~~~gt~~y~aP   87 (87)
                      ...++ ..+..++.|++.++  .|+|+++++|+|++|+|++++.+   ..+|++|||++.....   ....+||+.|+||
T Consensus       148 ~~~l~~~~~~~i~~qi~~aL--~~LH~~~ivH~Dlkp~NIll~~~---~~~kL~DfG~a~~~~~---~~~~~gt~~y~aP  219 (348)
T 1u5q_A          148 KKPLQEVEIAAVTHGALQGL--AYLHSHNMIHRDVKAGNILLSEP---GLVKLGDFGSASIMAP---ANSFVGTPYWMAP  219 (348)
T ss_dssp             TSCCCHHHHHHHHHHHHHHH--HHHHHTTCBCCCCSGGGEEEETT---TEEEECCCTTCBSSSS---BCCCCSCGGGCCH
T ss_pred             cCCCCHHHHHHHHHHHHHHH--HHHHhCCeeeCCCCHHHEEECCC---CCEEEeeccCceecCC---CCcccCCcceeCH
Confidence            34455 57889999999999  99999999999999999999975   7899999999876543   2346899999997

>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*

Probab=99.58  E-value=5.3e-15  Score=90.71  Aligned_cols=79  Identities=16%  Similarity=0.248  Sum_probs=63.6

Q ss_pred             HHHHHhhhcH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCcc----cccc
Q psy8010           4 FIITLVARIP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDVD----VREI   78 (87)
Q Consensus         4 ~~~~~~~~~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~~----~~~~   78 (87)
                      ++......++ +.+..++.|++.++  .++|+++++|+|++|+|++++.+   ..++++|||++........    ....
T Consensus       116 ~l~~~~~~~~~~~~~~i~~qi~~al--~~lH~~~ivH~Dikp~NIl~~~~---~~~kl~Dfg~~~~~~~~~~~~~~~~~~  190 (327)
T 3lxl_A          116 FLQRHRARLDASRLLLYSSQICKGM--EYLGSRRCVHRDLAARNILVESE---AHVKIADFGLAKLLPLDKDYYVVREPG  190 (327)
T ss_dssp             HHHHHGGGCCHHHHHHHHHHHHHHH--HHHHHTTEECSCCSGGGEEEEET---TEEEECCGGGCEECCTTCSEEECSSCC
T ss_pred             HHHhcccCCCHHHHHHHHHHHHHHH--HHHHhCCccCCCCChhhEEECCC---CCEEEcccccceecccCCccceeeccC
Confidence            4444444566 58899999999999  99999999999999999999985   7899999999987643332    2345


Q ss_pred             ccccccccC
Q psy8010          79 LGTPDYVGE   87 (87)
Q Consensus        79 ~gt~~y~aP   87 (87)
                      .|++.|+||
T Consensus       191 ~~~~~y~aP  199 (327)
T 3lxl_A          191 QSPIFWYAP  199 (327)
T ss_dssp             CSCGGGSCH
T ss_pred             CccccccCH
Confidence            688889987

>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}

Probab=99.58  E-value=1.3e-15  Score=95.93  Aligned_cols=74  Identities=22%  Similarity=0.401  Sum_probs=54.6

Q ss_pred             cH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeC-CCCCcEEEEeeccceecCCC----ccccccccccccc
Q psy8010          12 IP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGE-YPDCDVKLCDFGISRHLSRD----VDVREILGTPDYV   85 (87)
Q Consensus        12 ~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~-~~~~~~kl~dfg~~~~~~~~----~~~~~~~gt~~y~   85 (87)
                      ++ ..+..++.|++.|+  .|+|+++++|+|+||+||++... +....+|++|||+++.+...    ......+||+.|+
T Consensus       125 l~~~~~~~i~~qi~~al--~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~  202 (405)
T 3rgf_A          125 LPRGMVKSLLYQILDGI--HYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPLADLDPVVVTFWYR  202 (405)
T ss_dssp             CCHHHHHHHHHHHHHHH--HHHHHTTCCCCCCCGGGEEECCSSTTTTCEEECCTTCCC----------------CCCTTC
T ss_pred             CCHHHHHHHHHHHHHHH--HHHHhCCEeCCCcCHHHeEEecCCCCCCcEEEEECCCceecCCCCcccccCCCceecCccc
Confidence            45 57899999999999  99999999999999999999543 22478999999999876432    2234568999999


Q ss_pred             cC
Q psy8010          86 GE   87 (87)
Q Consensus        86 aP   87 (87)
                      ||
T Consensus       203 aP  204 (405)
T 3rgf_A          203 AP  204 (405)
T ss_dssp             CH
T ss_pred             Cc
Confidence            98

>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*

Probab=99.58  E-value=1.7e-15  Score=92.75  Aligned_cols=74  Identities=23%  Similarity=0.442  Sum_probs=62.5

Q ss_pred             cH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCccccccccccccccC
Q psy8010          12 IP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDVDVREILGTPDYVGE   87 (87)
Q Consensus        12 ~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~~~~~~~gt~~y~aP   87 (87)
                      ++ ..+..++.|++.++  .|+|+++++|+|++|.||+++..+....++++|||++.............||+.|+||
T Consensus       111 ~~~~~~~~~~~qi~~~l--~~lH~~~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~gt~~y~aP  185 (322)
T 2ycf_A          111 LKEATCKLYFYQMLLAV--QYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAP  185 (322)
T ss_dssp             CCHHHHHHHHHHHHHHH--HHHHHTTEECCCCSGGGEEESSSSSSCCEEECCCTTCEECCCCHHHHHHHSCCTTCCH
T ss_pred             CCHHHHHHHHHHHHHHH--HHHHHCCeeccCCCHHHEEEecCCCCCeEEEccCccceecccccccccccCCcCccCc
Confidence            44 57888999999999  9999999999999999999987643456999999999887655444567899999987

>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A

Probab=99.58  E-value=2.6e-15  Score=91.96  Aligned_cols=75  Identities=21%  Similarity=0.449  Sum_probs=63.1

Q ss_pred             hcH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCC-CCcEEEEeeccceecCCCccccccccccccccC
Q psy8010          11 RIP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYP-DCDVKLCDFGISRHLSRDVDVREILGTPDYVGE   87 (87)
Q Consensus        11 ~~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~-~~~~kl~dfg~~~~~~~~~~~~~~~gt~~y~aP   87 (87)
                      .++ +.+..++.|++.++  .++|+++++|+|++|+|+++..++. ...++++|||++.............||+.|+||
T Consensus       111 ~~~~~~~~~i~~qi~~aL--~~lH~~~ivH~dikp~NIl~~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~gt~~y~aP  187 (321)
T 2a2a_A          111 SLSEEEATSFIKQILDGV--NYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAP  187 (321)
T ss_dssp             CEEHHHHHHHHHHHHHHH--HHHHHTTEECCCCSGGGEEESCTTSSSCCEEECCCTTCEECCTTCCCCCCCSCGGGCCH
T ss_pred             CCCHHHHHHHHHHHHHHH--HHHHhCCeecCCCChHHEEEecCCCCcCCEEEccCccceecCccccccccCCCCCccCc
Confidence            345 57899999999999  9999999999999999999987521 126999999999887666555667899999997

>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*

Probab=99.57  E-value=5.1e-15  Score=88.40  Aligned_cols=79  Identities=14%  Similarity=0.199  Sum_probs=62.5

Q ss_pred             HHHHHhhhcH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCccc--ccccc
Q psy8010           4 FIITLVARIP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDVDV--REILG   80 (87)
Q Consensus         4 ~~~~~~~~~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~~~--~~~~g   80 (87)
                      ++......++ +.+..++.|++.++  .++|+.+++|+|++|.|++++.+   ..++++|||++.........  ....|
T Consensus        93 ~l~~~~~~~~~~~~~~i~~qi~~~l--~~lH~~~i~H~dikp~Nil~~~~---~~~~l~Dfg~~~~~~~~~~~~~~~~~~  167 (268)
T 3sxs_A           93 YLRSHGKGLEPSQLLEMCYDVCEGM--AFLESHQFIHRDLAARNCLVDRD---LCVKVSDFGMTRYVLDDQYVSSVGTKF  167 (268)
T ss_dssp             HHHHHGGGCCHHHHHHHHHHHHHHH--HHHHHTTEEESSCSGGGEEECTT---CCEEECCTTCEEECCTTCEEECCSCCC
T ss_pred             HHHHcCCCCCHHHHHHHHHHHHHHH--HHHHHCCeecCCcCcceEEECCC---CCEEEccCccceecchhhhhcccCCCc
Confidence            4444444466 58899999999999  99999999999999999999875   78999999999876443322  23456


Q ss_pred             ccccccC
Q psy8010          81 TPDYVGE   87 (87)
Q Consensus        81 t~~y~aP   87 (87)
                      ++.|+||
T Consensus       168 ~~~y~aP  174 (268)
T 3sxs_A          168 PVKWSAP  174 (268)
T ss_dssp             CGGGCCH
T ss_pred             CcccCCH
Confidence            6779887

>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}

Probab=99.57  E-value=2.1e-15  Score=92.73  Aligned_cols=73  Identities=15%  Similarity=0.173  Sum_probs=57.2

Q ss_pred             hhcH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCcc----cccccccccc
Q psy8010          10 ARIP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDVD----VREILGTPDY   84 (87)
Q Consensus        10 ~~~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~~----~~~~~gt~~y   84 (87)
                      ..++ ..+..++.|++.++  .|+|+.+++|+|++|+||+++.+   ..++++|||+++.......    .....||+.|
T Consensus       146 ~~~~~~~~~~i~~qi~~~L--~~LH~~~ivH~Dlkp~NIll~~~---~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~t~~y  220 (325)
T 3kul_A          146 GQFTIMQLVGMLRGVGAGM--RYLSDLGYVHRDLAARNVLVDSN---LVCKVSDFGLSRVLEDDPDAAYTTTGGKIPIRW  220 (325)
T ss_dssp             TCSCHHHHHHHHHHHHHHH--HHHHHTTEECSCCSGGGEEECTT---CCEEECCCSSCEECC----CCEECC---CCGGG
T ss_pred             cCCCHHHHHHHHHHHHHHH--HHHHHCCeeCCCCCcceEEECCC---CCEEECCCCcccccccCccceeeccCCCCcccc
Confidence            4555 58899999999999  99999999999999999999874   7899999999987643321    1233567789


Q ss_pred             ccC
Q psy8010          85 VGE   87 (87)
Q Consensus        85 ~aP   87 (87)
                      +||
T Consensus       221 ~aP  223 (325)
T 3kul_A          221 TAP  223 (325)
T ss_dssp             SCH
T ss_pred             cCH
Confidence            987

>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*

Probab=99.57  E-value=2.8e-15  Score=91.50  Aligned_cols=72  Identities=21%  Similarity=0.453  Sum_probs=53.2

Q ss_pred             hcH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCc----cccccccccccc
Q psy8010          11 RIP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDV----DVREILGTPDYV   85 (87)
Q Consensus        11 ~~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~----~~~~~~gt~~y~   85 (87)
                      .++ +.+..++.|++.++  .|+|+++++|+|++|+|++++.+   ..++++|||++..+....    ......||+.|+
T Consensus       112 ~~~~~~~~~~~~qi~~~l--~~lH~~~ivH~dlkp~Nil~~~~---~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~  186 (311)
T 3ork_A          112 PMTPKRAIEVIADACQAL--NFSHQNGIIHRDVKPANIMISAT---NAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYL  186 (311)
T ss_dssp             SCCHHHHHHHHHHHHHHH--HHHHHTTCCCCCCCGGGEEEETT---SCEEECCCSCC------------------CCTTC
T ss_pred             CCCHHHHHHHHHHHHHHH--HHHHHCCCCcCCCCHHHEEEcCC---CCEEEeeccCcccccccccccccccccCcCcccC
Confidence            345 57899999999999  99999999999999999999885   789999999998664322    223457999999


Q ss_pred             cC
Q psy8010          86 GE   87 (87)
Q Consensus        86 aP   87 (87)
                      ||
T Consensus       187 aP  188 (311)
T 3ork_A          187 SP  188 (311)
T ss_dssp             CH
T ss_pred             CH
Confidence            97

>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*

Probab=99.57  E-value=3e-15  Score=92.08  Aligned_cols=71  Identities=20%  Similarity=0.361  Sum_probs=60.3

Q ss_pred             cH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCc---cccccccccccccC
Q psy8010          12 IP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDV---DVREILGTPDYVGE   87 (87)
Q Consensus        12 ~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~---~~~~~~gt~~y~aP   87 (87)
                      ++ +.+..++.|++.++  .|+|++|++|+|++|+|++++.+   ..++++|||++..+....   .....+||+.|+||
T Consensus       102 ~~~~~~~~i~~qi~~aL--~~LH~~givH~Dlkp~NIll~~~---~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aP  176 (323)
T 3tki_A          102 MPEPDAQRFFHQLMAGV--VYLHGIGITHRDIKPENLLLDER---DNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAP  176 (323)
T ss_dssp             CCHHHHHHHHHHHHHHH--HHHHHTTEECSCCSGGGEEECTT---CCEEECCCTTCEECEETTEECCBCSCCSCGGGSCH
T ss_pred             CCHHHHHHHHHHHHHHH--HHHHHCCccccccchHHEEEeCC---CCEEEEEeeccceeccCCcccccCCCccCcCccCc
Confidence            44 57899999999999  99999999999999999999885   789999999998653222   23467899999997

>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*

Probab=99.57  E-value=4.6e-15  Score=91.12  Aligned_cols=71  Identities=25%  Similarity=0.481  Sum_probs=61.1

Q ss_pred             cH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCc-cccccccccccccC
Q psy8010          12 IP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDV-DVREILGTPDYVGE   87 (87)
Q Consensus        12 ~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~-~~~~~~gt~~y~aP   87 (87)
                      ++ +.+..++.|++.++  .|+|+.+++|+|++|+|++++.+   ..++++|||++....... ......||+.|+||
T Consensus       138 l~~~~~~~i~~qi~~~L--~~LH~~~ivH~Dlkp~NIll~~~---~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aP  210 (321)
T 2c30_A          138 LNEEQIATVCEAVLQAL--AYLHAQGVIHRDIKSDSILLTLD---GRVKLSDFGFCAQISKDVPKRKSLVGTPYWMAP  210 (321)
T ss_dssp             CCHHHHHHHHHHHHHHH--HHHHHTTEECCCCSGGGEEECTT---CCEEECCCTTCEECCSSSCCBCCCCSCGGGCCH
T ss_pred             CCHHHHHHHHHHHHHHH--HHHHHCCeecCCCCHHHEEECCC---CcEEEeeeeeeeecccCccccccccCCccccCH
Confidence            44 57899999999999  99999999999999999999875   789999999998765433 33567899999997

>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B

Probab=99.57  E-value=2.4e-15  Score=91.89  Aligned_cols=71  Identities=27%  Similarity=0.468  Sum_probs=61.6

Q ss_pred             cH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCccccccccccccccC
Q psy8010          12 IP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDVDVREILGTPDYVGE   87 (87)
Q Consensus        12 ~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~~~~~~~gt~~y~aP   87 (87)
                      ++ +.+..++.|++.++  .++|++|++|+|++|.|++++.+   ..++++|||++.............|++.|+||
T Consensus       117 ~~~~~~~~~~~qi~~~l--~~lH~~gi~H~dlkp~Nili~~~---~~~kl~Dfg~~~~~~~~~~~~~~~~~~~y~aP  188 (326)
T 1blx_A          117 VPTETIKDMMFQLLRGL--DFLHSHRVVHRDLKPQNILVTSS---GQIKLADFGLARIYSFQMALTSVVVTLWYRAP  188 (326)
T ss_dssp             SCHHHHHHHHHHHHHHH--HHHHHTTCCCCCCCGGGEEECTT---CCEEECSCCSCCCCCGGGGGCCCCCCCTTCCH
T ss_pred             CCHHHHHHHHHHHHHHH--HHHHHCCceeccCCHHHeEEcCC---CCEEEecCcccccccCCCCccccccccceeCH
Confidence            55 57899999999999  99999999999999999999875   78999999999876544445567889999987

>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*

Probab=99.57  E-value=3.1e-15  Score=91.78  Aligned_cols=71  Identities=14%  Similarity=0.316  Sum_probs=60.4

Q ss_pred             cH-HHHHHHHHHHHHHHHHHHhhhC----------CceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCcc---ccc
Q psy8010          12 IP-RLVAKVTVTLLGSLNHHFTSTH----------SLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDVD---VRE   77 (87)
Q Consensus        12 ~~-~~~~~~~~q~~~~l~~~~~h~~----------~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~~---~~~   77 (87)
                      ++ +.+..++.|++.++  .|+|+.          +++|+|+||+|++++.+   ..+|++|||+++.+.....   ...
T Consensus       118 ~~~~~~~~i~~qi~~al--~~LH~~~~~l~~~~~~~ivH~Dlkp~Nill~~~---~~~kL~DFg~a~~~~~~~~~~~~~~  192 (322)
T 3soc_A          118 VSWNELCHIAETMARGL--AYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNN---LTACIADFGLALKFEAGKSAGDTHG  192 (322)
T ss_dssp             BCHHHHHHHHHHHHHHH--HHHTCCEEEETTEEECEEECSCCSGGGEEECTT---CCEEECCCTTCEEECTTSCCCCCTT
T ss_pred             CCHHHHHHHHHHHHHHH--HHHHhhccccccccCCCEEeCCCChHhEEECCC---CeEEEccCCcccccccccCcccccc
Confidence            45 57899999999999  999999          99999999999999875   7899999999987644332   234


Q ss_pred             cccccccccC
Q psy8010          78 ILGTPDYVGE   87 (87)
Q Consensus        78 ~~gt~~y~aP   87 (87)
                      ..||+.|+||
T Consensus       193 ~~gt~~y~aP  202 (322)
T 3soc_A          193 QVGTRRYMAP  202 (322)
T ss_dssp             CCCCGGGCCH
T ss_pred             CccCccccCH
Confidence            6899999998

>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}

Probab=99.57  E-value=2.7e-15  Score=94.42  Aligned_cols=74  Identities=22%  Similarity=0.347  Sum_probs=62.0

Q ss_pred             cH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeC-CCCCcEEEEeeccceecCCCccccccccccccccC
Q psy8010          12 IP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGE-YPDCDVKLCDFGISRHLSRDVDVREILGTPDYVGE   87 (87)
Q Consensus        12 ~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~-~~~~~~kl~dfg~~~~~~~~~~~~~~~gt~~y~aP   87 (87)
                      ++ +.+..++.|++.++  .|+|+++++|+|++|+||++... +....+|++|||+++............||+.|+||
T Consensus       109 l~~~~~~~i~~qi~~aL--~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~kL~DFG~a~~~~~~~~~~~~~gt~~y~aP  184 (396)
T 4eut_A          109 LPESEFLIVLRDVVGGM--NHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFVSLYGTEEYLHP  184 (396)
T ss_dssp             CCHHHHHHHHHHHHHHH--HHHHHTTEECCCCCGGGEEEEECTTSCEEEEECCGGGCEECCCGGGSSCSSSCCTTCCH
T ss_pred             CCHHHHHHHHHHHHHHH--HHHHHCCEEECCcCHHHEEEeecCCCceeEEEecCCCceEccCCCccccccCCccccCH
Confidence            55 57899999999999  99999999999999999998322 11356999999999987666666677899999997

>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*

Probab=99.57  E-value=7.1e-15  Score=88.84  Aligned_cols=72  Identities=26%  Similarity=0.486  Sum_probs=63.1

Q ss_pred             hcH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCccccccccccccccC
Q psy8010          11 RIP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDVDVREILGTPDYVGE   87 (87)
Q Consensus        11 ~~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~~~~~~~gt~~y~aP   87 (87)
                      .++ +.+..++.|++.++  .++|+++++|+|++|.|++++.+   ..++++|||++.............|++.|+||
T Consensus       120 ~~~~~~~~~~~~qi~~~l--~~lH~~~i~H~dl~p~Nil~~~~---~~~kl~dfg~~~~~~~~~~~~~~~~~~~y~aP  192 (298)
T 1phk_A          120 TLSEKETRKIMRALLEVI--CALHKLNIVHRDLKPENILLDDD---MNIKLTDFGFSCQLDPGEKLREVCGTPSYLAP  192 (298)
T ss_dssp             SCCHHHHHHHHHHHHHHH--HHHHHTTEECSCCSGGGEEECTT---CCEEECCCTTCEECCTTCCBCCCCSCGGGCCH
T ss_pred             CCCHHHHHHHHHHHHHHH--HHHHHCCcccCCCCcceEEEcCC---CcEEEecccchhhcCCCcccccccCCccccCH
Confidence            344 57899999999999  99999999999999999999875   78999999999887666556667899999987

>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A

Probab=99.57  E-value=4.9e-15  Score=92.67  Aligned_cols=69  Identities=13%  Similarity=0.199  Sum_probs=58.3

Q ss_pred             HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCcc---ccccccccccccC
Q psy8010          14 RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDVD---VREILGTPDYVGE   87 (87)
Q Consensus        14 ~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~~---~~~~~gt~~y~aP   87 (87)
                      +.+..++.|++.|+  .|+|+++++|+|+||+||+++.+   ..+|++|||+++.+.....   .....|++.|+||
T Consensus       203 ~~~~~i~~qi~~aL--~~LH~~~ivHrDlkp~NIll~~~---~~~kl~DFG~a~~~~~~~~~~~~~~~~~t~~y~aP  274 (370)
T 2psq_A          203 KDLVSCTYQLARGM--EYLASQKCIHRDLAARNVLVTEN---NVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAP  274 (370)
T ss_dssp             HHHHHHHHHHHHHH--HHHHHTTEECSCCCGGGEEECTT---CCEEECCCSSCEETTCCCTTCTTTTTTSCGGGCCH
T ss_pred             HHHHHHHHHHHHHH--HHHHhCCeeccccchhhEEECCC---CCEEEccccCCcccCcccceecccCCCcccceECH
Confidence            57888999999999  99999999999999999999875   7899999999987644322   2345678899997

>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}

Probab=99.57  E-value=2.6e-15  Score=92.99  Aligned_cols=73  Identities=18%  Similarity=0.277  Sum_probs=60.3

Q ss_pred             hhcH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCC--cEEEEeeccceecCCCcc--------cccc
Q psy8010          10 ARIP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDC--DVKLCDFGISRHLSRDVD--------VREI   78 (87)
Q Consensus        10 ~~~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~--~~kl~dfg~~~~~~~~~~--------~~~~   78 (87)
                      ..++ +.+..++.|++.++  .|+|+++++|+|++|+|++++.+   .  .++++|||+++.+.....        ....
T Consensus       154 ~~l~~~~~~~i~~qi~~~L--~~LH~~~ivH~Dikp~NIl~~~~---~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~  228 (352)
T 2jii_A          154 HVLSERSVLQVACRLLDAL--EFLHENEYVHGNVTAENIFVDPE---DQSQVTLAGYGFAFRYCPSGKHVAYVEGSRSPH  228 (352)
T ss_dssp             GCCCHHHHHHHHHHHHHHH--HHHHHTTCBCSCCCGGGEEEETT---EEEEEEECCGGGCBCSSGGGCCCCCCTTSSCTT
T ss_pred             CCCCHHHHHHHHHHHHHHH--HHHHhCCccCCCCCHHHEEEcCC---CCceEEEecCcceeeccCCCccccccccccccc
Confidence            3455 58999999999999  99999999999999999999874   4  799999999987643221        1345


Q ss_pred             ccccccccC
Q psy8010          79 LGTPDYVGE   87 (87)
Q Consensus        79 ~gt~~y~aP   87 (87)
                      .||+.|+||
T Consensus       229 ~gt~~y~aP  237 (352)
T 2jii_A          229 EGDLEFISM  237 (352)
T ss_dssp             CSCTTTCCH
T ss_pred             cCCccccCH
Confidence            899999997

>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}

Probab=99.56  E-value=4.8e-15  Score=91.66  Aligned_cols=74  Identities=18%  Similarity=0.257  Sum_probs=60.7

Q ss_pred             hcH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCcc--------ccccccc
Q psy8010          11 RIP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDVD--------VREILGT   81 (87)
Q Consensus        11 ~~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~~--------~~~~~gt   81 (87)
                      .++ +++..++.|++.++  .|+|+++++|+|++|+||+++.++ ...++++|||+++.+.....        .....||
T Consensus       147 ~~~~~~~~~i~~qi~~aL--~~LH~~~ivH~Dlkp~NIll~~~~-~~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt  223 (345)
T 2v62_A          147 TFKKSTVLQLGIRMLDVL--EYIHENEYVHGDIKAANLLLGYKN-PDQVYLADYGLSYRYCPNGNHKQYQENPRKGHNGT  223 (345)
T ss_dssp             BCCHHHHHHHHHHHHHHH--HHHHHTTEECSCCSGGGEEEESSS-TTSEEECCCTTCEESSGGGCCCCCCCCGGGCSCSC
T ss_pred             CCCHHHHHHHHHHHHHHH--HHHHhCCeeCCCcCHHHEEEccCC-CCcEEEEeCCCceecccccccccchhccccccCCC
Confidence            345 58999999999999  999999999999999999998752 13899999999987643221        1445899


Q ss_pred             cccccC
Q psy8010          82 PDYVGE   87 (87)
Q Consensus        82 ~~y~aP   87 (87)
                      +.|+||
T Consensus       224 ~~y~aP  229 (345)
T 2v62_A          224 IEFTSL  229 (345)
T ss_dssp             TTTCCH
T ss_pred             ccccCH
Confidence            999997

>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...

Probab=99.56  E-value=4.3e-15  Score=92.45  Aligned_cols=72  Identities=26%  Similarity=0.518  Sum_probs=60.9

Q ss_pred             hcH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCcc----ccccccccccc
Q psy8010          11 RIP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDVD----VREILGTPDYV   85 (87)
Q Consensus        11 ~~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~~----~~~~~gt~~y~   85 (87)
                      .++ +.+..++.|++.++  .|+|+++++|+|++|+|++++.+   ..++++|||++........    ....+||+.|+
T Consensus       124 ~~~~~~~~~i~~qi~~aL--~~LH~~~ivH~Dikp~NIl~~~~---~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~  198 (364)
T 3qyz_A          124 HLSNDHICYFLYQILRGL--KYIHSANVLHRDLKPSNLLLNTT---CDLKICDFGLARVADPDHDHTGFLTEYVATRWYR  198 (364)
T ss_dssp             CCCHHHHHHHHHHHHHHH--HHHHHTTEECCCCCGGGEEECTT---CCEEECCCTTCEECCGGGCBCCTTCCCCSCGGGC
T ss_pred             CCCHHHHHHHHHHHHHHH--HHHHHCCeecCCCChHhEEECCC---CCEEEEeCcceEecCCCCCccccccccccccCCC
Confidence            345 57889999999999  99999999999999999999885   7899999999987643322    24568999999


Q ss_pred             cC
Q psy8010          86 GE   87 (87)
Q Consensus        86 aP   87 (87)
                      ||
T Consensus       199 aP  200 (364)
T 3qyz_A          199 AP  200 (364)
T ss_dssp             CH
T ss_pred             CC
Confidence            97

>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*

Probab=99.56  E-value=2.6e-15  Score=90.78  Aligned_cols=71  Identities=11%  Similarity=0.244  Sum_probs=59.4

Q ss_pred             cH-HHHHHHHHHHHHHHHHHHhh--------hCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCcc-----ccc
Q psy8010          12 IP-RLVAKVTVTLLGSLNHHFTS--------THSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDVD-----VRE   77 (87)
Q Consensus        12 ~~-~~~~~~~~q~~~~l~~~~~h--------~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~~-----~~~   77 (87)
                      ++ ..+..++.|++.++  .|+|        +.+++|+|+||+|++++.+   ..+|++|||+++.......     ...
T Consensus       102 ~~~~~~~~i~~~i~~~l--~~lH~~~~~~~~~~~ivH~Dlkp~Nill~~~---~~~kl~Dfg~a~~~~~~~~~~~~~~~~  176 (301)
T 3q4u_A          102 LDTVSCLRIVLSIASGL--AHLHIEIFGTQGKPAIAHRDLKSKNILVKKN---GQCCIADLGLAVMHSQSTNQLDVGNNP  176 (301)
T ss_dssp             BCHHHHHHHHHHHHHHH--HHHHSCBCSTTCBCEEECSCCCGGGEEECTT---SCEEECCCTTCEEEETTTTEEECCCCC
T ss_pred             cCHHHHHHHHHHHHHHH--HHHHHhhhhccCCCCeecCCCChHhEEEcCC---CCEEEeeCCCeeecccccccccccccc
Confidence            44 57889999999999  9999        9999999999999999975   7899999999986543322     234


Q ss_pred             cccccccccC
Q psy8010          78 ILGTPDYVGE   87 (87)
Q Consensus        78 ~~gt~~y~aP   87 (87)
                      ..||+.|+||
T Consensus       177 ~~gt~~y~aP  186 (301)
T 3q4u_A          177 RVGTKRYMAP  186 (301)
T ss_dssp             CCCCGGGCCH
T ss_pred             cccccceeCh
Confidence            5899999998

>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...

Probab=99.56  E-value=1.4e-15  Score=91.87  Aligned_cols=73  Identities=15%  Similarity=0.317  Sum_probs=51.8

Q ss_pred             hhcH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCC---Cccccccccccccc
Q psy8010          10 ARIP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSR---DVDVREILGTPDYV   85 (87)
Q Consensus        10 ~~~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~---~~~~~~~~gt~~y~   85 (87)
                      ..++ +.+..++.|++.++  .++|+++++|+|++|.|++++.+   ..++++|||++.....   ........||+.|+
T Consensus       115 ~~~~~~~~~~i~~qi~~~L--~~lH~~~i~H~Dlkp~Nil~~~~---~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~  189 (289)
T 3og7_A          115 TKFEMKKLIDIARQTARGM--DYLHAKSIIHRDLKSNNIFLHED---NTVKIGDFGLATEKSRWSGSHQFEQLSGSILWM  189 (289)
T ss_dssp             --CCHHHHHHHHHHHHHHH--HHHHHTTCCCSCCCGGGEEEETT---TEEEECCCC------------------CCCTTC
T ss_pred             CCCCHHHHHHHHHHHHHHH--HHHHhCCcccccCccceEEECCC---CCEEEccceeccccccccccccccccCCCcccc
Confidence            3455 57889999999999  99999999999999999999985   7899999999876532   22234568899999


Q ss_pred             cC
Q psy8010          86 GE   87 (87)
Q Consensus        86 aP   87 (87)
                      ||
T Consensus       190 aP  191 (289)
T 3og7_A          190 AP  191 (289)
T ss_dssp             CH
T ss_pred             Cc
Confidence            87

>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*

Probab=99.56  E-value=3.8e-15  Score=94.79  Aligned_cols=71  Identities=21%  Similarity=0.282  Sum_probs=59.5

Q ss_pred             cH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCccccccccccccccC
Q psy8010          12 IP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDVDVREILGTPDYVGE   87 (87)
Q Consensus        12 ~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~~~~~~~gt~~y~aP   87 (87)
                      ++ +.+..++.|++.++  .|+|+++++|+|+||+||+++.++ ...+|++|||++.....  ...+.+||+.|+||
T Consensus       197 ~~~~~~~~i~~qi~~aL--~~LH~~~ivHrDlKp~NILl~~~~-~~~vkL~DFG~a~~~~~--~~~~~~gt~~y~aP  268 (429)
T 3kvw_A          197 FSLPLVRKFAHSILQCL--DALHKNRIIHCDLKPENILLKQQG-RSGIKVIDFGSSCYEHQ--RVYTYIQSRFYRAP  268 (429)
T ss_dssp             CCHHHHHHHHHHHHHHH--HHHHHHTEECSCCSGGGEEESSTT-SCCEEECCCTTCEETTC--CCCSSCSCGGGCCH
T ss_pred             CCHHHHHHHHHHHHHHH--HHHHHCCeecCCCCHHHeEEccCC-CcceEEeecccceecCC--cccccCCCCCccCh
Confidence            55 57899999999999  999999999999999999999852 12399999999976432  34456899999998

>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A

Probab=99.56  E-value=1.4e-15  Score=91.57  Aligned_cols=72  Identities=29%  Similarity=0.514  Sum_probs=51.8

Q ss_pred             hcH-HHHHHHHHHHHHHHHHHHhhhC-CceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCccccccccccccccC
Q psy8010          11 RIP-RLVAKVTVTLLGSLNHHFTSTH-SLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDVDVREILGTPDYVGE   87 (87)
Q Consensus        11 ~~~-~~~~~~~~q~~~~l~~~~~h~~-~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~~~~~~~gt~~y~aP   87 (87)
                      .++ +.+..++.|++.++  .|+|++ +++|+|++|+|++++.+   ..++++|||++.............||+.|+||
T Consensus       105 ~~~~~~~~~i~~qi~~~l--~~lH~~~~i~H~dlkp~Nil~~~~---~~~kl~Dfg~~~~~~~~~~~~~~~~t~~y~aP  178 (290)
T 3fme_A          105 TIPEDILGKIAVSIVKAL--EHLHSKLSVIHRDVKPSNVLINAL---GQVKMCDFGISGYLVDDVAKDIDAGCKPYMAP  178 (290)
T ss_dssp             CCCHHHHHHHHHHHHHHH--HHHHHHSCCCCCCCSGGGCEECTT---CCEEBCCC---------------CCCCCCSCH
T ss_pred             CCCHHHHHHHHHHHHHHH--HHHhhcCCeecCCCCHHHEEECCC---CCEEEeecCCcccccccccccccCCCccccCh
Confidence            355 57889999999999  999998 99999999999999885   78999999999876555455556899999987

>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}

Probab=99.56  E-value=2.7e-15  Score=90.03  Aligned_cols=73  Identities=19%  Similarity=0.393  Sum_probs=49.9

Q ss_pred             hhcH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCC-ccccccccccccccC
Q psy8010          10 ARIP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRD-VDVREILGTPDYVGE   87 (87)
Q Consensus        10 ~~~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~-~~~~~~~gt~~y~aP   87 (87)
                      ..++ +.+..++.|++.++  .++|+++++|+|++|.|++++.+   ..++++|||++...... .......||+.|+||
T Consensus       107 ~~~~~~~~~~~~~qi~~~l--~~lH~~~i~H~dl~p~Nili~~~---~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aP  181 (278)
T 3cok_A          107 KPFSENEARHFMHQIITGM--LYLHSHGILHRDLTLSNLLLTRN---MNIKIADFGLATQLKMPHEKHYTLCGTPNYISP  181 (278)
T ss_dssp             SCCCHHHHHHHHHHHHHHH--HHHHHTTEECSSCCGGGEEECTT---CCEEECCCTTCEECC------------------
T ss_pred             CCCCHHHHHHHHHHHHHHH--HHHHHCCeecCCCCHHHEEEcCC---CCEEEEeecceeeccCCCCcceeccCCCCcCCc
Confidence            3455 58899999999999  99999999999999999999875   78999999999876432 233456899999998

>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*

Probab=99.56  E-value=6.2e-15  Score=92.26  Aligned_cols=80  Identities=16%  Similarity=0.203  Sum_probs=62.0

Q ss_pred             hHHHHHhhhcH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCccc---ccc
Q psy8010           3 NFIITLVARIP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDVDV---REI   78 (87)
Q Consensus         3 ~~~~~~~~~~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~~~---~~~   78 (87)
                      ++++.....++ +.+..++.|++.|+  .|+|+++++|+|++|+|++++.+   ..+|++|||+++....+...   ...
T Consensus       201 ~~l~~~~~~~~~~~~~~~~~qi~~~l--~~LH~~~ivHrDlkp~Nil~~~~---~~~kl~DfG~s~~~~~~~~~~~~~~~  275 (377)
T 3cbl_A          201 TFLRTEGARLRVKTLLQMVGDAAAGM--EYLESKCCIHRDLAARNCLVTEK---NVLKISDFGMSREEADGVYAASGGLR  275 (377)
T ss_dssp             HHHHHHGGGCCHHHHHHHHHHHHHHH--HHHHHTTEECSCCSGGGEEECTT---CCEEECCGGGCEECTTSEEECCSSCC
T ss_pred             HHHHhcCCCCCHHHHHHHHHHHHHHH--HHHHHCCcCCcccCHHHEEEcCC---CcEEECcCCCceecCCCceeecCCCC
Confidence            34444444566 57899999999999  99999999999999999999875   78999999999875433221   122


Q ss_pred             ccccccccC
Q psy8010          79 LGTPDYVGE   87 (87)
Q Consensus        79 ~gt~~y~aP   87 (87)
                      .+++.|+||
T Consensus       276 ~~~~~y~aP  284 (377)
T 3cbl_A          276 QVPVKWTAP  284 (377)
T ss_dssp             EEEGGGSCH
T ss_pred             CCCcCcCCH
Confidence            456779987

>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}

Probab=99.56  E-value=4.4e-15  Score=91.10  Aligned_cols=69  Identities=16%  Similarity=0.292  Sum_probs=57.9

Q ss_pred             HHHHHHHHHHHHHHHHHHhhhC---------CceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCc---------cc
Q psy8010          14 RLVAKVTVTLLGSLNHHFTSTH---------SLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDV---------DV   75 (87)
Q Consensus        14 ~~~~~~~~q~~~~l~~~~~h~~---------~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~---------~~   75 (87)
                      ..+..++.|++.++  .|+|+.         +++|+|+||+|++++.+   ..+|++|||++..+....         ..
T Consensus       111 ~~~~~i~~qi~~~L--~~LH~~~~~~~~~~~~ivH~Dikp~Nill~~~---~~~kL~DFG~a~~~~~~~~~~~~~~~~~~  185 (336)
T 3g2f_A          111 VSSCRLAHSVTRGL--AYLHTELPRGDHYKPAISHRDLNSRNVLVKND---GTCVISDFGLSMRLTGNRLVRPGEEDNAA  185 (336)
T ss_dssp             HHHHHHHHHHHHHH--HHHHCCBCCGGGCBCCEECSSCSGGGEEECTT---SCEEECCCTTCEECSSSSCC---------
T ss_pred             hHHHHHHHHHHHHH--HHHHhhhccccccccceeecccccceEEEcCC---CcEEEeeccceeecccccccCcccccccc
Confidence            46788999999999  999999         99999999999999885   789999999998764321         12


Q ss_pred             cccccccccccC
Q psy8010          76 REILGTPDYVGE   87 (87)
Q Consensus        76 ~~~~gt~~y~aP   87 (87)
                      ...+||+.|+||
T Consensus       186 ~~~~gt~~y~aP  197 (336)
T 3g2f_A          186 ISEVGTIRYMAP  197 (336)
T ss_dssp             CCTTSCGGGCCH
T ss_pred             ccCCCccceeCc
Confidence            345799999998

>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A

Probab=99.55  E-value=5.9e-15  Score=89.88  Aligned_cols=75  Identities=16%  Similarity=0.310  Sum_probs=56.2

Q ss_pred             hcH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCc--------cccccccc
Q psy8010          11 RIP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDV--------DVREILGT   81 (87)
Q Consensus        11 ~~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~--------~~~~~~gt   81 (87)
                      .++ ..+..++.|++.++  .|+|+++++|+|++|+|++++.++....++++|||++.......        .....+||
T Consensus       107 ~~~~~~~~~i~~qi~~~l--~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~gt  184 (316)
T 2ac3_A          107 HFNELEASVVVQDVASAL--DFLHNKGIAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGDCSPISTPELLTPCGS  184 (316)
T ss_dssp             SCCHHHHHHHHHHHHHHH--HHHHHTTCCCCCCCGGGEEESCSSSSCSEEECCTTCCC-------------------CCS
T ss_pred             CCCHHHHHHHHHHHHHHH--HHHHhCCceeCCCCHHHEEEccCCCcCceEEEEccCccccccCCccccccccccccccCC
Confidence            345 57889999999999  99999999999999999999876433459999999987653211        12345799


Q ss_pred             cccccC
Q psy8010          82 PDYVGE   87 (87)
Q Consensus        82 ~~y~aP   87 (87)
                      +.|+||
T Consensus       185 ~~y~aP  190 (316)
T 2ac3_A          185 AEYMAP  190 (316)
T ss_dssp             GGGCCH
T ss_pred             cCccCh
Confidence            999997

>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*

Probab=99.55  E-value=1e-14  Score=87.36  Aligned_cols=71  Identities=14%  Similarity=0.214  Sum_probs=57.3

Q ss_pred             cH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCC----------------CCCcEEEEeeccceecCCCcc
Q psy8010          12 IP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEY----------------PDCDVKLCDFGISRHLSRDVD   74 (87)
Q Consensus        12 ~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~----------------~~~~~kl~dfg~~~~~~~~~~   74 (87)
                      ++ +.+..++.|++.++  .|+|+++++|+|++|+|++++..+                +...++++|||.+....... 
T Consensus       112 ~~~~~~~~i~~qi~~al--~~lH~~~ivH~Dikp~NIl~~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~~~~~~~~~-  188 (289)
T 1x8b_A          112 FKEAELKDLLLQVGRGL--RYIHSMSLVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGDLGHVTRISSPQ-  188 (289)
T ss_dssp             CCHHHHHHHHHHHHHHH--HHHHHTTEECSCCSGGGEEEC--------------------CCCEEECCCTTCEETTCSC-
T ss_pred             CCHHHHHHHHHHHHHHH--HHHHhCCEeecCCCHHHEEEcCCCCCcccccccccccccCCceEEEEcccccccccCCcc-
Confidence            55 57899999999999  999999999999999999998542                23579999999998764332 


Q ss_pred             ccccccccccccC
Q psy8010          75 VREILGTPDYVGE   87 (87)
Q Consensus        75 ~~~~~gt~~y~aP   87 (87)
                        ...||+.|+||
T Consensus       189 --~~~gt~~y~aP  199 (289)
T 1x8b_A          189 --VEEGDSRFLAN  199 (289)
T ss_dssp             --CCCCCGGGCCH
T ss_pred             --ccCCCccccCh
Confidence              34689999987

>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}

Probab=99.55  E-value=8e-15  Score=90.82  Aligned_cols=72  Identities=24%  Similarity=0.375  Sum_probs=59.1

Q ss_pred             cH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCC----------------------CCCcEEEEeecccee
Q psy8010          12 IP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEY----------------------PDCDVKLCDFGISRH   68 (87)
Q Consensus        12 ~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~----------------------~~~~~kl~dfg~~~~   68 (87)
                      ++ +.+..++.|++.|+  .|+|+++++|+|+||+||+++...                      ....++++|||++..
T Consensus       134 ~~~~~~~~i~~qi~~aL--~~LH~~~ivHrDlkp~NIll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DFG~a~~  211 (360)
T 3llt_A          134 FHIEDIKLYCIEILKAL--NYLRKMSLTHTDLKPENILLDDPYFEKSLITVRRVTDGKKIQIYRTKSTGIKLIDFGCATF  211 (360)
T ss_dssp             CCHHHHHHHHHHHHHHH--HHHHHTTEECSCCSGGGEEESCTTCCEEEEEEECTTTCCEEEEEEESCCCEEECCCTTCEE
T ss_pred             CCHHHHHHHHHHHHHHH--HHHHHCCeeeCCCCcccEEEccccccccccchhcccccccccccccCCCCEEEEeccCcee
Confidence            55 57899999999999  999999999999999999997410                      136799999999986


Q ss_pred             cCCCccccccccccccccC
Q psy8010          69 LSRDVDVREILGTPDYVGE   87 (87)
Q Consensus        69 ~~~~~~~~~~~gt~~y~aP   87 (87)
                      ...  ......||+.|+||
T Consensus       212 ~~~--~~~~~~gt~~y~aP  228 (360)
T 3llt_A          212 KSD--YHGSIINTRQYRAP  228 (360)
T ss_dssp             TTS--CCCSCCSCGGGCCH
T ss_pred             cCC--CCcCccCcccccCc
Confidence            433  23456899999997

>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...

Probab=99.55  E-value=1.3e-14  Score=89.00  Aligned_cols=72  Identities=17%  Similarity=0.224  Sum_probs=60.5

Q ss_pred             hcH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCccccccccccccccC
Q psy8010          11 RIP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDVDVREILGTPDYVGE   87 (87)
Q Consensus        11 ~~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~~~~~~~gt~~y~aP   87 (87)
                      .++ +.+..++.|++.++  .|+|+++++|+|++|.||+++.+  ...+|++|||++...... ......||+.|+||
T Consensus       145 ~l~~~~~~~i~~qi~~~L--~~LH~~~ivH~Dlkp~NIll~~~--~~~~kL~Dfg~~~~~~~~-~~~~~~gt~~y~aP  217 (320)
T 3a99_A          145 ALQEELARSFFWQVLEAV--RHCHNCGVLHRDIKDENILIDLN--RGELKLIDFGSGALLKDT-VYTDFDGTRVYSPP  217 (320)
T ss_dssp             SCCHHHHHHHHHHHHHHH--HHHHHTTEECCCCSGGGEEEETT--TTEEEECCCTTCEECCSS-CBCCCCSCGGGSCH
T ss_pred             CCCHHHHHHHHHHHHHHH--HHHHHCCcEeCCCCHHHEEEeCC--CCCEEEeeCccccccccc-cccCCCCCccCCCh
Confidence            344 57889999999999  99999999999999999999843  378999999999876543 33456899999997

>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*

Probab=99.55  E-value=5.3e-15  Score=91.41  Aligned_cols=71  Identities=15%  Similarity=0.317  Sum_probs=59.0

Q ss_pred             cH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCc---cccccccccccccC
Q psy8010          12 IP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDV---DVREILGTPDYVGE   87 (87)
Q Consensus        12 ~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~---~~~~~~gt~~y~aP   87 (87)
                      ++ +.+..++.|++.++  .|+|+++++|+|++|.||+++.+   ..++++|||++..+....   ......||+.|+||
T Consensus       190 l~~~~~~~~~~ql~~aL--~~LH~~~ivH~Dikp~NIll~~~---~~~kl~Dfg~a~~~~~~~~~~~~~~~~~t~~y~aP  264 (359)
T 3vhe_A          190 LTLEHLICYSFQVAKGM--EFLASRKCIHRDLAARNILLSEK---NVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAP  264 (359)
T ss_dssp             BCHHHHHHHHHHHHHHH--HHHHHTTCCCSCCSGGGEEECGG---GCEEECCCGGGSCTTSCTTCEEC--CEECGGGCCH
T ss_pred             cCHHHHHHHHHHHHHHH--HHHHHCCcccCCCChhhEEEcCC---CcEEEEeccceeeecccccchhccccCCCceeECh
Confidence            45 57899999999999  99999999999999999999875   789999999998764332   22456788999997

>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*

Probab=99.55  E-value=7.6e-15  Score=88.24  Aligned_cols=79  Identities=11%  Similarity=0.143  Sum_probs=59.8

Q ss_pred             HHHHHhhhcH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCcc--cccccc
Q psy8010           4 FIITLVARIP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDVD--VREILG   80 (87)
Q Consensus         4 ~~~~~~~~~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~~--~~~~~g   80 (87)
                      ++......++ +.+..++.|++.++  .++|+++++|+|++|.|++++.+   ..++++|||++........  .....|
T Consensus       102 ~l~~~~~~~~~~~~~~~~~~i~~~l--~~lH~~~i~H~dlkp~Nil~~~~---~~~kl~Dfg~~~~~~~~~~~~~~~~~~  176 (281)
T 3cc6_A          102 YLERNKNSLKVLTLVLYSLQICKAM--AYLESINCVHRDIAVRNILVASP---ECVKLGDFGLSRYIEDEDYYKASVTRL  176 (281)
T ss_dssp             HHHHHTTTCCHHHHHHHHHHHHHHH--HHHHHTTCCCCCCSGGGEEEEET---TEEEECCCCGGGCC---------CCCC
T ss_pred             HHHhccccCCHHHHHHHHHHHHHHH--HHHHHCCcccCCCccceEEECCC---CcEEeCccCCCcccccccccccccCCC
Confidence            3433334455 57889999999999  99999999999999999999985   7899999999886543322  233466


Q ss_pred             ccccccC
Q psy8010          81 TPDYVGE   87 (87)
Q Consensus        81 t~~y~aP   87 (87)
                      ++.|+||
T Consensus       177 ~~~y~aP  183 (281)
T 3cc6_A          177 PIKWMSP  183 (281)
T ss_dssp             CGGGCCH
T ss_pred             CcceeCc
Confidence            7889987

>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*

Probab=99.54  E-value=7e-15  Score=88.04  Aligned_cols=72  Identities=22%  Similarity=0.458  Sum_probs=52.7

Q ss_pred             hcH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCccccccccccccccC
Q psy8010          11 RIP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDVDVREILGTPDYVGE   87 (87)
Q Consensus        11 ~~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~~~~~~~gt~~y~aP   87 (87)
                      .++ +.+..++.|++.++  .++|+++++|+|++|.|++++.+   ..++++|||++.............|++.|+||
T Consensus       107 ~~~~~~~~~~~~qi~~~l--~~lH~~~i~H~dl~p~Nil~~~~---~~~~l~dfg~~~~~~~~~~~~~~~~~~~y~aP  179 (276)
T 2h6d_A          107 RVEEMEARRLFQQILSAV--DYCHRHMVVHRDLKPENVLLDAH---MNAKIADFGLSNMMSDGEFLRTSCGSPNYAAP  179 (276)
T ss_dssp             SCCHHHHHHHHHHHHHHH--HHHHHHCSSCCCCCGGGEEECTT---SCEEECCCCGGGCCCC-------------CCT
T ss_pred             CCCHHHHHHHHHHHHHHH--HHHHHCCCccCCCChhhEEECCC---CCEEEeecccccccCCCcceecccCCccccCH
Confidence            344 57899999999999  99999999999999999999875   78999999999876555545566889999998

>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...

Probab=99.54  E-value=1.1e-14  Score=87.46  Aligned_cols=75  Identities=23%  Similarity=0.512  Sum_probs=58.0

Q ss_pred             hcH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCC-CCCcEEEEeeccceecCCCccccccccccccccC
Q psy8010          11 RIP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEY-PDCDVKLCDFGISRHLSRDVDVREILGTPDYVGE   87 (87)
Q Consensus        11 ~~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~-~~~~~kl~dfg~~~~~~~~~~~~~~~gt~~y~aP   87 (87)
                      .++ +.+..++.|++.++  .++|+++++|+|++|.|+++..++ ....++++|||++.............|++.|+||
T Consensus       104 ~~~~~~~~~~~~~i~~~l--~~lH~~~i~H~dl~p~Nil~~~~~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~y~aP  180 (283)
T 3bhy_A          104 SLTEDEATQFLKQILDGV--HYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIFGTPEFVAP  180 (283)
T ss_dssp             SCCHHHHHHHHHHHHHHH--HHHHHTTEECSCCSGGGEEESCSSSSSCCEEECCCTTCEECC--------CCCGGGCCH
T ss_pred             CCCHHHHHHHHHHHHHHH--HHHHhCCccCCCCChHHEEEecCCCCCCceEEEecccceeccCCCcccccCCCcCccCc
Confidence            345 57899999999999  999999999999999999998752 1237999999999887655555566899999987

>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}

Probab=99.54  E-value=6.9e-15  Score=92.14  Aligned_cols=71  Identities=10%  Similarity=0.207  Sum_probs=59.5

Q ss_pred             cH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCc---cccccccccccccC
Q psy8010          12 IP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDV---DVREILGTPDYVGE   87 (87)
Q Consensus        12 ~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~---~~~~~~gt~~y~aP   87 (87)
                      ++ +.+..++.|++.++  .++|+++++|+|+||+||+++.+   ..+|++|||+++......   ......||+.|+||
T Consensus       188 l~~~~~~~i~~qi~~aL--~~LH~~~ivH~Dlkp~NIll~~~---~~~kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aP  262 (382)
T 3tt0_A          188 LSSKDLVSCAYQVARGM--EYLASKKCIHRDLAARNVLVTED---NVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAP  262 (382)
T ss_dssp             CCHHHHHHHHHHHHHHH--HHHHHTTCCCSCCCGGGEEECTT---CCEEECSCSCCCCSSCCCTTCCCTTCCCGGGGSCH
T ss_pred             cCHHHHHHHHHHHHHHH--HHHHhCCEecCCCCcceEEEcCC---CcEEEcccCcccccccccccccccCCCCCcceeCH
Confidence            55 58899999999999  99999999999999999999875   789999999998764332   22345678889987

>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*

Probab=99.54  E-value=1.6e-14  Score=86.93  Aligned_cols=79  Identities=15%  Similarity=0.188  Sum_probs=60.3

Q ss_pred             HHHHHhhhcH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCcc----cccc
Q psy8010           4 FIITLVARIP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDVD----VREI   78 (87)
Q Consensus         4 ~~~~~~~~~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~~----~~~~   78 (87)
                      ++......++ +.+..++.|++.++  .++|+++++|+|++|+|++++.+   ..++++|||++........    ....
T Consensus       110 ~l~~~~~~~~~~~~~~~~~~i~~~l--~~lH~~~i~H~dikp~Nili~~~---~~~kl~Dfg~~~~~~~~~~~~~~~~~~  184 (291)
T 1u46_A          110 RLRKHQGHFLLGTLSRYAVQVAEGM--GYLESKRFIHRDLAARNLLLATR---DLVKIGDFGLMRALPQNDDHYVMQEHR  184 (291)
T ss_dssp             HHHHHGGGSCHHHHHHHHHHHHHHH--HHHHHTTEECSCCCGGGEEEEET---TEEEECCCTTCEECCC-CCEEEC----
T ss_pred             HHHhccCCcCHHHHHHHHHHHHHHH--HHHHhCCcccCCCchheEEEcCC---CCEEEccccccccccccccchhhhccC
Confidence            3444444555 57899999999999  99999999999999999999985   7899999999987643322    1234


Q ss_pred             ccccccccC
Q psy8010          79 LGTPDYVGE   87 (87)
Q Consensus        79 ~gt~~y~aP   87 (87)
                      .|++.|+||
T Consensus       185 ~~~~~y~aP  193 (291)
T 1u46_A          185 KVPFAWCAP  193 (291)
T ss_dssp             -CCGGGCCH
T ss_pred             CCCceeeCc
Confidence            677789887

>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}

Probab=99.54  E-value=8e-15  Score=89.14  Aligned_cols=72  Identities=28%  Similarity=0.475  Sum_probs=55.0

Q ss_pred             hcH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCc-cccccccccccccC
Q psy8010          11 RIP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDV-DVREILGTPDYVGE   87 (87)
Q Consensus        11 ~~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~-~~~~~~gt~~y~aP   87 (87)
                      .++ +.+..++.|++.++  .++|++|++|+|++|+|++++.+   ..++++|||++....... ......||+.|+||
T Consensus        98 ~~~~~~~~~i~~~l~~~l--~~lH~~~ivH~dlkp~Nil~~~~---~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aP  171 (311)
T 4agu_A           98 GVPEHLVKSITWQTLQAV--NFCHKHNCIHRDVKPENILITKH---SVIKLCDFGFARLLTGPSDYYDDEVATRWYRSP  171 (311)
T ss_dssp             CCCHHHHHHHHHHHHHHH--HHHHHTTEECCCCSGGGEEECTT---SCEEECCCTTCEECC------------GGGCCH
T ss_pred             CCCHHHHHHHHHHHHHHH--HHHHHCCCcCCCCChhhEEEcCC---CCEEEeeCCCchhccCcccccCCCcCCccccCh
Confidence            355 57899999999999  99999999999999999999875   789999999998765332 33556899999987

>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A

Probab=99.54  E-value=2.6e-15  Score=90.24  Aligned_cols=79  Identities=13%  Similarity=0.187  Sum_probs=61.7

Q ss_pred             HHHHHhhhcH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCcc--cccccc
Q psy8010           4 FIITLVARIP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDVD--VREILG   80 (87)
Q Consensus         4 ~~~~~~~~~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~~--~~~~~g   80 (87)
                      ++......++ +.+..++.|++.++  .++|+++++|+|++|.|++++.+   ..++++|||++........  .....|
T Consensus       109 ~l~~~~~~~~~~~~~~i~~qi~~~l--~~lH~~~i~H~dikp~Nili~~~---~~~kl~Dfg~~~~~~~~~~~~~~~~~~  183 (283)
T 3gen_A          109 YLREMRHRFQTQQLLEMCKDVCEAM--EYLESKQFLHRDLAARNCLVNDQ---GVVKVSDFGLSRYVLDDEYTSSVGSKF  183 (283)
T ss_dssp             HHHCGGGCCCHHHHHHHHHHHHHHH--HHHHHTTCCCSSCSGGGEEECTT---SCEEECSTTGGGGBCCHHHHSTTSTTS
T ss_pred             HHHHhccCCCHHHHHHHHHHHHHHH--HHHHHCCccCCCCccceEEEcCC---CCEEEccccccccccccccccccCCcc
Confidence            3333344566 58899999999999  99999999999999999999875   7899999999876543221  233456


Q ss_pred             ccccccC
Q psy8010          81 TPDYVGE   87 (87)
Q Consensus        81 t~~y~aP   87 (87)
                      ++.|+||
T Consensus       184 ~~~y~aP  190 (283)
T 3gen_A          184 PVRWSPP  190 (283)
T ss_dssp             CGGGCCH
T ss_pred             CcccCCH
Confidence            7789887

>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...

Probab=99.54  E-value=4.8e-15  Score=89.66  Aligned_cols=71  Identities=11%  Similarity=0.200  Sum_probs=57.4

Q ss_pred             cH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCc-----cccccccccccc
Q psy8010          12 IP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDV-----DVREILGTPDYV   85 (87)
Q Consensus        12 ~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~-----~~~~~~gt~~y~   85 (87)
                      ++ +.+..++.|++.++  .++|+++++|+|++|+|++++.+   ..++++|||++.......     ......||+.|+
T Consensus       125 ~~~~~~~~i~~ql~~~l--~~lH~~~i~H~dikp~Nil~~~~---~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~y~  199 (298)
T 3f66_A          125 PTVKDLIGFGLQVAKGM--KYLASKKFVHRDLAARNCMLDEK---FTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWM  199 (298)
T ss_dssp             CCHHHHHHHHHHHHHHH--HHHHHTTCCCSCCSGGGEEECTT---CCEEECSCGGGCCCSCGGGCBC-----CCBCGGGS
T ss_pred             CCHHHHHHHHHHHHHHH--HHHHhCCccCCCCchheEEECCC---CCEEECcccccccccccchhccccccCCCCCcccc
Confidence            44 57888999999999  99999999999999999999874   789999999998664332     123446778899


Q ss_pred             cC
Q psy8010          86 GE   87 (87)
Q Consensus        86 aP   87 (87)
                      ||
T Consensus       200 aP  201 (298)
T 3f66_A          200 AL  201 (298)
T ss_dssp             CH
T ss_pred             Ch
Confidence            87

>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7

Probab=99.54  E-value=8.8e-15  Score=89.61  Aligned_cols=71  Identities=14%  Similarity=0.275  Sum_probs=58.3

Q ss_pred             cH-HHHHHHHHHHHHHHHHHHhhhC--------CceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCccc-----cc
Q psy8010          12 IP-RLVAKVTVTLLGSLNHHFTSTH--------SLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDVDV-----RE   77 (87)
Q Consensus        12 ~~-~~~~~~~~q~~~~l~~~~~h~~--------~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~~~-----~~   77 (87)
                      ++ +.+..++.|++.++  .|+|++        +++|+|+||+|++++.+   ..+|++|||++..+......     ..
T Consensus       131 ~~~~~~~~i~~~i~~~l--~~lH~~~~~~~~~~~ivH~Dikp~Nill~~~---~~~kl~Dfg~a~~~~~~~~~~~~~~~~  205 (337)
T 3mdy_A          131 LDAKSMLKLAYSSVSGL--CHLHTEIFSTQGKPAIAHRDLKSKNILVKKN---GTCCIADLGLAVKFISDTNEVDIPPNT  205 (337)
T ss_dssp             BCHHHHHHHHHHHHHHH--HHHHSCBCSTTCBCCEECSCCCGGGEEECTT---SCEEECCCTTCEECC---------CCS
T ss_pred             CCHHHHHHHHHHHHHHH--HHHHHhhhhhccCCCEEecccchHHEEECCC---CCEEEEeCCCceeeccccccccCCCCC
Confidence            44 57889999999999  999998        99999999999999875   78999999999876433222     34


Q ss_pred             cccccccccC
Q psy8010          78 ILGTPDYVGE   87 (87)
Q Consensus        78 ~~gt~~y~aP   87 (87)
                      ..||+.|+||
T Consensus       206 ~~gt~~y~aP  215 (337)
T 3mdy_A          206 RVGTKRYMPP  215 (337)
T ss_dssp             SCSCGGGCCH
T ss_pred             CccCcceeCh
Confidence            5899999997

>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}

Probab=99.54  E-value=8.5e-15  Score=89.50  Aligned_cols=71  Identities=23%  Similarity=0.315  Sum_probs=49.9

Q ss_pred             cH-HHHHHHHHHHHHHHHHHHhhhCC--ceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCccc-------------
Q psy8010          12 IP-RLVAKVTVTLLGSLNHHFTSTHS--LYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDVDV-------------   75 (87)
Q Consensus        12 ~~-~~~~~~~~q~~~~l~~~~~h~~~--~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~~~-------------   75 (87)
                      ++ +.+..++.|++.++  .|+|+++  ++|+|++|.||+++.+   ..++++|||++.........             
T Consensus       133 ~~~~~~~~i~~qi~~~l--~~LH~~~~~ivH~Dikp~NIl~~~~---~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~  207 (337)
T 3ll6_A          133 LSCDTVLKIFYQTCRAV--QHMHRQKPPIIHRDLKVENLLLSNQ---GTIKLCDFGSATTISHYPDYSWSAQRRALVEEE  207 (337)
T ss_dssp             CCHHHHHHHHHHHHHHH--HHHHTSSSCCBCCCCCGGGCEECTT---SCEEBCCCTTCBCCSSCC---------------
T ss_pred             CCHHHHHHHHHHHHHHH--HHHHhCCCCEEEccCCcccEEECCC---CCEEEecCccceeccccCcccccccccccchhh
Confidence            55 58899999999999  9999999  9999999999999985   78999999999876432211             


Q ss_pred             cccccccccccC
Q psy8010          76 REILGTPDYVGE   87 (87)
Q Consensus        76 ~~~~gt~~y~aP   87 (87)
                      ....||+.|+||
T Consensus       208 ~~~~~t~~y~aP  219 (337)
T 3ll6_A          208 ITRNTTPMYRTP  219 (337)
T ss_dssp             ------------
T ss_pred             ccccCCCCcCCh
Confidence            145689999998

>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*

Probab=99.54  E-value=5.9e-15  Score=88.85  Aligned_cols=79  Identities=20%  Similarity=0.193  Sum_probs=59.9

Q ss_pred             HHHHHhhhcH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCC-----CcEEEEeeccceecCCCccccc
Q psy8010           4 FIITLVARIP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPD-----CDVKLCDFGISRHLSRDVDVRE   77 (87)
Q Consensus         4 ~~~~~~~~~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~-----~~~kl~dfg~~~~~~~~~~~~~   77 (87)
                      ++......++ +.+..++.|++.++  .|+|+++++|+|++|+|++++.++..     ..++++|||++......   ..
T Consensus       102 ~l~~~~~~~~~~~~~~i~~qi~~~L--~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~~~~~kl~Dfg~~~~~~~~---~~  176 (289)
T 4fvq_A          102 YLKKNKNCINILWKLEVAKQLAAAM--HFLEENTLIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITVLPK---DI  176 (289)
T ss_dssp             HHHHTGGGCCHHHHHHHHHHHHHHH--HHHHHTTCCCCCCCGGGEEEEECCBGGGTBCCEEEECCCCSCTTTSCH---HH
T ss_pred             HHHhCCCCCCHHHHHHHHHHHHHHH--HHHhhCCeECCCcCcceEEEecCCcccccccceeeeccCcccccccCc---cc
Confidence            4444333355 57889999999999  99999999999999999999886210     11999999998654322   33


Q ss_pred             cccccccccC
Q psy8010          78 ILGTPDYVGE   87 (87)
Q Consensus        78 ~~gt~~y~aP   87 (87)
                      ..|++.|+||
T Consensus       177 ~~~~~~y~aP  186 (289)
T 4fvq_A          177 LQERIPWVPP  186 (289)
T ss_dssp             HHHTTTTSCH
T ss_pred             cCCcCcccCH
Confidence            4678889987

>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*

Probab=99.54  E-value=7.7e-15  Score=91.46  Aligned_cols=73  Identities=22%  Similarity=0.361  Sum_probs=59.8

Q ss_pred             hcH-HHHHHHHHHHHHHHHHHHhhhC-CceecCCCCCceEeeeCC-----------------------------------
Q psy8010          11 RIP-RLVAKVTVTLLGSLNHHFTSTH-SLYRSCSQPQNLVLTGEY-----------------------------------   53 (87)
Q Consensus        11 ~~~-~~~~~~~~q~~~~l~~~~~h~~-~~~h~~~~~~~~l~~~~~-----------------------------------   53 (87)
                      .++ +.+..++.|++.|+  .|+|++ |++|+|+||+||+++.++                                   
T Consensus       142 ~~~~~~~~~i~~qi~~aL--~~lH~~~givHrDikp~NIll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  219 (397)
T 1wak_A          142 GLPLPCVKKIIQQVLQGL--DYLHTKCRIIHTDIKPENILLSVNEQYIRRLAAEATEWQRSGAPPPSGSAVSTAPATAGN  219 (397)
T ss_dssp             CCCHHHHHHHHHHHHHHH--HHHHHTTCEECCCCSGGGEEECCCHHHHHHHHHHHC---------------------CCT
T ss_pred             CCCHHHHHHHHHHHHHHH--HHHHHhCCEecCCCCHHHeeEeccchhhhhhhhhhHHHhhcCCCCCCCCccccCCccccc
Confidence            355 58899999999999  999998 999999999999998641                                   


Q ss_pred             -----------CCCcEEEEeeccceecCCCccccccccccccccC
Q psy8010          54 -----------PDCDVKLCDFGISRHLSRDVDVREILGTPDYVGE   87 (87)
Q Consensus        54 -----------~~~~~kl~dfg~~~~~~~~~~~~~~~gt~~y~aP   87 (87)
                                 ....++++|||++......  ....+||+.|+||
T Consensus       220 ~~~~~~~~~~~~~~~~kl~DfG~a~~~~~~--~~~~~gt~~y~aP  262 (397)
T 1wak_A          220 FLVNPLEPKNAEKLKVKIADLGNACWVHKH--FTEDIQTRQYRSL  262 (397)
T ss_dssp             TSCCTTSGGGGGGCCEEECCGGGCEETTBC--SCSCCSCGGGCCH
T ss_pred             ccccccccccccccceEecccccccccccc--CccCCCCCcccCC
Confidence                       0126999999999876432  3456899999997

>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=99.53  E-value=3.1e-15  Score=89.50  Aligned_cols=73  Identities=10%  Similarity=0.161  Sum_probs=59.0

Q ss_pred             hhcH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCc--ccccccccccccc
Q psy8010          10 ARIP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDV--DVREILGTPDYVG   86 (87)
Q Consensus        10 ~~~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~--~~~~~~gt~~y~a   86 (87)
                      ..++ +.+..++.|++.++  .++|+++++|+|++|.|++++.+   ..++++|||++.......  ......|++.|+|
T Consensus       101 ~~~~~~~~~~i~~~i~~~l--~~lH~~~i~H~dikp~Nil~~~~---~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~y~a  175 (269)
T 4hcu_A          101 GLFAAETLLGMCLDVCEGM--AYLEEACVIHRDLAARNCLVGEN---QVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWAS  175 (269)
T ss_dssp             TCCCHHHHHHHHHHHHHHH--HHHHHTTCCCSCCCGGGEEECGG---GCEEECCTTGGGGBCCHHHHSTTSTTCCGGGCC
T ss_pred             cccCHHHHHHHHHHHHHHH--HHHHhCCeecCCcchheEEEcCC---CCEEeccccccccccccccccccCcccccccCC
Confidence            3455 57889999999999  99999999999999999999875   689999999988654332  1234466778988


Q ss_pred             C
Q psy8010          87 E   87 (87)
Q Consensus        87 P   87 (87)
                      |
T Consensus       176 P  176 (269)
T 4hcu_A          176 P  176 (269)
T ss_dssp             H
T ss_pred             H
Confidence            7

>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}

Probab=99.53  E-value=1.7e-14  Score=87.79  Aligned_cols=74  Identities=20%  Similarity=0.351  Sum_probs=61.8

Q ss_pred             hhhcH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCc-ccccccccccccc
Q psy8010           9 VARIP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDV-DVREILGTPDYVG   86 (87)
Q Consensus         9 ~~~~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~-~~~~~~gt~~y~a   86 (87)
                      ...++ +.+..++.|++.++  .++|+.+++|+|++|.|++++.+   ..++++|||++....... ......|++.|+|
T Consensus       119 ~~~~~~~~~~~i~~~i~~~l--~~lH~~~i~H~dl~p~Nil~~~~---~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~a  193 (314)
T 3com_A          119 NKTLTEDEIATILQSTLKGL--EYLHFMRKIHRDIKAGNILLNTE---GHAKLADFGVAGQLTDTMAKRNTVIGTPFWMA  193 (314)
T ss_dssp             TCCCCHHHHHHHHHHHHHHH--HHHHHTTEECCCCSGGGEEECTT---CCEEECCCTTCEECBTTBSCBCCCCSCGGGCC
T ss_pred             CCCCCHHHHHHHHHHHHHHH--HHHHhCCCcCCCcCHHHEEECCC---CCEEEeecccchhhhhhccccCccCCCCCccC
Confidence            34455 57899999999999  99999999999999999999875   789999999998764432 2345688999998


Q ss_pred             C
Q psy8010          87 E   87 (87)
Q Consensus        87 P   87 (87)
                      |
T Consensus       194 P  194 (314)
T 3com_A          194 P  194 (314)
T ss_dssp             H
T ss_pred             h
Confidence            7

>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*

Probab=99.53  E-value=1.1e-14  Score=87.90  Aligned_cols=75  Identities=23%  Similarity=0.566  Sum_probs=62.9

Q ss_pred             hcH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCccccccccccccccC
Q psy8010          11 RIP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDVDVREILGTPDYVGE   87 (87)
Q Consensus        11 ~~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~~~~~~~gt~~y~aP   87 (87)
                      .++ +.+..++.|++.++  .++|+++++|+|++|.|++++..+....++++|||++.............|++.|+||
T Consensus       117 ~~~~~~~~~i~~qi~~~l--~~LH~~~i~H~dl~p~NIlv~~~~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~y~aP  192 (287)
T 2wei_A          117 RFSEHDAARIIKQVFSGI--TYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAP  192 (287)
T ss_dssp             SCCHHHHHHHHHHHHHHH--HHHHHTTCCCSCCCGGGEEESCSSTTCCEEECSTTGGGTBCCCSSCSCHHHHHTTCCH
T ss_pred             CCCHHHHHHHHHHHHHHH--HHHHHCCeeccCCChhhEEEecCCCcccEEEeccCcceeecCCCccccccCcccccCh
Confidence            445 57899999999999  9999999999999999999987543457999999998876555555566789999987

>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}

Probab=99.53  E-value=8e-15  Score=93.49  Aligned_cols=71  Identities=13%  Similarity=0.224  Sum_probs=54.5

Q ss_pred             HHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCC--CCCcEEEEeeccceecCCCc----cccccccccccccC
Q psy8010          15 LVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEY--PDCDVKLCDFGISRHLSRDV----DVREILGTPDYVGE   87 (87)
Q Consensus        15 ~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~--~~~~~kl~dfg~~~~~~~~~----~~~~~~gt~~y~aP   87 (87)
                      .+..++.|++.|+  .|+|+++++|+|+||+||+++.++  ....++++|||+++....+.    .....+||+.|+||
T Consensus       119 ~~~~i~~qi~~aL--~~LH~~~ivHrDlKp~NIll~~~~~~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~gt~~y~AP  195 (432)
T 3p23_A          119 EPITLLQQTTSGL--AHLHSLNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSFSRRSGVPGTEGWIAP  195 (432)
T ss_dssp             CHHHHHHHHHHHH--HHHHHTTCCCCCCSTTSEEECCCBTTTBCCEEECCTTEEECC------------CCSCTTSCCG
T ss_pred             hHHHHHHHHHHHH--HHHHHCcCEeCCCCHHHEEEecCCCCCceeEEEecccceeeccCCCcceeeccccCCCcCccCh
Confidence            5678999999999  999999999999999999996432  12457899999998764332    23456899999998

>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*

Probab=99.53  E-value=1.5e-14  Score=89.36  Aligned_cols=73  Identities=25%  Similarity=0.426  Sum_probs=49.8

Q ss_pred             cH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCccccccccccccccC
Q psy8010          12 IP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDVDVREILGTPDYVGE   87 (87)
Q Consensus        12 ~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~~~~~~~gt~~y~aP   87 (87)
                      ++ +.+..++.|++.++  .|+|+++++|+|++|.|++++.++....++++|||++...... ......||+.|+||
T Consensus       125 l~~~~~~~i~~ql~~~l--~~LH~~~ivH~dlkp~NIll~~~~~~~~~kl~Dfg~~~~~~~~-~~~~~~~t~~y~aP  198 (336)
T 3fhr_A          125 FTEREAAEIMRDIGTAI--QFLHSHNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETTQN-ALQTPCYTPYYVAP  198 (336)
T ss_dssp             CBHHHHHHHHHHHHHHH--HHHHHTTEECSCCSGGGEEESCSSTTCCEEECCCTTCEEC------------------
T ss_pred             CCHHHHHHHHHHHHHHH--HHHHhCCeecCCCCHHHEEEEecCCCceEEEeccccceecccc-ccccCCCCcCccCh
Confidence            55 58899999999999  9999999999999999999987544466999999999875432 33456889999998

>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*

Probab=99.53  E-value=2.2e-14  Score=88.37  Aligned_cols=72  Identities=17%  Similarity=0.300  Sum_probs=61.2

Q ss_pred             hcH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCC-CccccccccccccccC
Q psy8010          11 RIP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSR-DVDVREILGTPDYVGE   87 (87)
Q Consensus        11 ~~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~-~~~~~~~~gt~~y~aP   87 (87)
                      .++ +++..++.|++.++  .|+|+++++|+|++|.||+++.+   ..++++|||++..... ........||+.|+||
T Consensus       137 ~l~~~~~~~i~~qi~~aL--~~LH~~~ivH~dlkp~NIl~~~~---~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aP  210 (335)
T 2owb_A          137 ALTEPEARYYLRQIVLGC--QYLHRNRVIHRDLKLGNLFLNED---LEVKIGDFGLATKVEYDGERKKVLCGTPNYIAP  210 (335)
T ss_dssp             SCCHHHHHHHHHHHHHHH--HHHHHTTEECSCCCGGGEEECTT---CCEEECCCTTCEECCSTTCCBCCCCSCCSSCCH
T ss_pred             CCCHHHHHHHHHHHHHHH--HHHHHCCCEecCCCchhEEEcCC---CCEEEeeccCceecccCcccccccCCCccccCH
Confidence            355 57899999999999  99999999999999999999875   7899999999987643 2334556899999987

>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=99.53  E-value=1.1e-14  Score=87.85  Aligned_cols=73  Identities=18%  Similarity=0.240  Sum_probs=60.1

Q ss_pred             hhcH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCccc----ccccccccc
Q psy8010          10 ARIP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDVDV----REILGTPDY   84 (87)
Q Consensus        10 ~~~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~~~----~~~~gt~~y   84 (87)
                      ..++ +.+..++.|++.++  .++|+++++|+|++|+|++++.+   ..++++|||++.........    ....||+.|
T Consensus       105 ~~~~~~~~~~~~~qi~~~l--~~lH~~~i~H~dlkp~Nili~~~---~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y  179 (287)
T 1u59_A          105 EEIPVSNVAELLHQVSMGM--KYLEEKNFVHRDLAARNVLLVNR---HYAKISDFGLSKALGADDSYYTARSAGKWPLKW  179 (287)
T ss_dssp             TTSCHHHHHHHHHHHHHHH--HHHHHTTEECCCCSGGGEEEEET---TEEEECCCTTCEECTTCSCEECCCCSSCCCGGG
T ss_pred             ccCCHHHHHHHHHHHHHHH--HHHHHCCEeeCCCchheEEEcCC---CCEEECcccceeeeccCcceeeccccccccccc
Confidence            3455 57899999999999  99999999999999999999985   78999999999876433221    234567889


Q ss_pred             ccC
Q psy8010          85 VGE   87 (87)
Q Consensus        85 ~aP   87 (87)
                      +||
T Consensus       180 ~aP  182 (287)
T 1u59_A          180 YAP  182 (287)
T ss_dssp             CCH
T ss_pred             cCH
Confidence            987

>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A

Probab=99.53  E-value=8.8e-15  Score=88.24  Aligned_cols=69  Identities=20%  Similarity=0.418  Sum_probs=52.8

Q ss_pred             HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCC---------------cccccc
Q psy8010          14 RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRD---------------VDVREI   78 (87)
Q Consensus        14 ~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~---------------~~~~~~   78 (87)
                      +.+..++.|++.++  .++|+++++|+|++|+|++++.+   ..++++|||++......               ......
T Consensus       116 ~~~~~i~~qi~~~l--~~LH~~~i~H~dlkp~Nil~~~~---~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  190 (303)
T 1zy4_A          116 DEYWRLFRQILEAL--SYIHSQGIIHRDLKPMNIFIDES---RNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSA  190 (303)
T ss_dssp             HHHHHHHHHHHHHH--HHHHHTTCCCSCCCGGGEEECTT---SCEEECCCCCCSCTTC----------------------
T ss_pred             HHHHHHHHHHHHHH--HHHHhCCeecccCCHHhEEEcCC---CCEEEeeCcchhhcccccchhccccccccccccccccC
Confidence            57888999999999  99999999999999999999875   78999999998765321               122456


Q ss_pred             ccccccccC
Q psy8010          79 LGTPDYVGE   87 (87)
Q Consensus        79 ~gt~~y~aP   87 (87)
                      .|++.|+||
T Consensus       191 ~~~~~y~aP  199 (303)
T 1zy4_A          191 IGTAMYVAT  199 (303)
T ss_dssp             ---CTTSCH
T ss_pred             CCcccccCc
Confidence            789999987

>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*

Probab=99.53  E-value=5.5e-15  Score=90.92  Aligned_cols=74  Identities=20%  Similarity=0.281  Sum_probs=54.0

Q ss_pred             cH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCC--CCCcEEEEeeccceecCCC-ccccccccccccccC
Q psy8010          12 IP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEY--PDCDVKLCDFGISRHLSRD-VDVREILGTPDYVGE   87 (87)
Q Consensus        12 ~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~--~~~~~kl~dfg~~~~~~~~-~~~~~~~gt~~y~aP   87 (87)
                      ++ +.+..++.|++.++  .|+|+++++|+|++|+||++..++  +...++++|||++...... .......||+.|+||
T Consensus       129 ~~~~~~~~i~~ql~~~l--~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~t~~y~aP  206 (329)
T 3gbz_A          129 VSMRVIKSFLYQLINGV--NFCHSRRCLHRDLKPQNLLLSVSDASETPVLKIGDFGLARAFGIPIRQFTHEIITLWYRPP  206 (329)
T ss_dssp             CCHHHHHHHHHHHHHHH--HHHHHTTCCCSCCCGGGEEEEC-----CCEEEECCTTHHHHHC-----------CCTTCCH
T ss_pred             CCHHHHHHHHHHHHHHH--HHHHhCCEECCCCCHHHEEEecCCCCccceEEECcCCCccccCCcccccCCCcCCccccCH
Confidence            44 57899999999999  999999999999999999996432  1345999999999866432 233456889999987

>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}

Probab=99.52  E-value=2.1e-14  Score=88.07  Aligned_cols=79  Identities=16%  Similarity=0.241  Sum_probs=62.2

Q ss_pred             HHHHHhhhcH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCcc----cccc
Q psy8010           4 FIITLVARIP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDVD----VREI   78 (87)
Q Consensus         4 ~~~~~~~~~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~~----~~~~   78 (87)
                      ++......++ +.+..++.|++.++  .++|+.+++|+|++|.||+++.+   ..++++|||++........    ....
T Consensus       134 ~l~~~~~~~~~~~~~~i~~qi~~aL--~~LH~~~ivH~dikp~NIli~~~---~~~kL~Dfg~~~~~~~~~~~~~~~~~~  208 (326)
T 2w1i_A          134 YLQKHKERIDHIKLLQYTSQICKGM--EYLGTKRYIHRDLATRNILVENE---NRVKIGDFGLTKVLPQDKEYYKVKEPG  208 (326)
T ss_dssp             HHHHSTTSSCHHHHHHHHHHHHHHH--HHHHHTTEECSCCCGGGEEEEET---TEEEECCCTTCEECCSSCSEEECSSCC
T ss_pred             HHHhcccCCCHHHHHHHHHHHHHHH--HHHHhCCEeccCCCcceEEEcCC---CcEEEecCcchhhccccccccccccCC
Confidence            3333334455 57889999999999  99999999999999999999985   7899999999987654332    1234


Q ss_pred             ccccccccC
Q psy8010          79 LGTPDYVGE   87 (87)
Q Consensus        79 ~gt~~y~aP   87 (87)
                      .+++.|+||
T Consensus       209 ~~~~~y~aP  217 (326)
T 2w1i_A          209 ESPIFWYAP  217 (326)
T ss_dssp             SCCGGGCCH
T ss_pred             CCceeEECc
Confidence            667789887

>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*

Probab=99.52  E-value=1.4e-14  Score=92.16  Aligned_cols=70  Identities=13%  Similarity=0.273  Sum_probs=53.0

Q ss_pred             HHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCC----------CCCcEEEEeeccceecCCCcc-----cccccc
Q psy8010          16 VAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEY----------PDCDVKLCDFGISRHLSRDVD-----VREILG   80 (87)
Q Consensus        16 ~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~----------~~~~~kl~dfg~~~~~~~~~~-----~~~~~g   80 (87)
                      +..++.|++.|+  .|+|+++++|+|++|+||+++..+          ....++++|||++..+..+..     ....+|
T Consensus       117 ~~~i~~qi~~aL--~~LH~~~ivHrDLkp~NILl~~~~~~~~~~~~~~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~~g  194 (434)
T 2rio_A          117 PISLLRQIASGV--AHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQSSFRTNLNNPSG  194 (434)
T ss_dssp             HHHHHHHHHHHH--HHHHHTTEECCCCSGGGEEEECCHHHHSCCTTCCCSCEEEECCCTTCEECCC--------------
T ss_pred             HHHHHHHHHHHH--HHHHHCCccccCCChHhEEEecCcccccccccCCCceEEEEcccccceecCCCCccceeeecCCCC
Confidence            467999999999  999999999999999999997531          235799999999988754322     235689


Q ss_pred             ccccccC
Q psy8010          81 TPDYVGE   87 (87)
Q Consensus        81 t~~y~aP   87 (87)
                      |+.|+||
T Consensus       195 t~~y~aP  201 (434)
T 2rio_A          195 TSGWRAP  201 (434)
T ss_dssp             CCTTSCH
T ss_pred             CCCccCH
Confidence            9999998

>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*

Probab=99.52  E-value=1.5e-14  Score=87.79  Aligned_cols=71  Identities=15%  Similarity=0.292  Sum_probs=59.5

Q ss_pred             cH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCcc---ccccccccccccC
Q psy8010          12 IP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDVD---VREILGTPDYVGE   87 (87)
Q Consensus        12 ~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~~---~~~~~gt~~y~aP   87 (87)
                      ++ +.+..++.|++.++  .++|+++++|+|++|.|++++.+   ..++++|||++........   .....|++.|+||
T Consensus       142 ~~~~~~~~~~~qi~~~l--~~lH~~~i~H~dlkp~Nil~~~~---~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aP  216 (313)
T 1t46_A          142 LDLEDLLSFSYQVAKGM--AFLASKNCIHRDLAARNILLTHG---RITKICDFGLARDIKNDSNYVVKGNARLPVKWMAP  216 (313)
T ss_dssp             CCHHHHHHHHHHHHHHH--HHHHHTTCCCSCCSGGGEEEETT---TEEEECCCGGGSCTTSCTTSEECSSSEECGGGCCH
T ss_pred             CCHHHHHHHHHHHHHHH--HHHHHCCeecCCCccceEEEcCC---CCEEEccccccccccccccceeccCCCCcceeeCh
Confidence            45 57899999999999  99999999999999999999875   7899999999987644332   2345678889987

>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*

Probab=99.52  E-value=2.7e-14  Score=87.39  Aligned_cols=69  Identities=20%  Similarity=0.276  Sum_probs=58.3

Q ss_pred             HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCc---cccccccccccccC
Q psy8010          14 RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDV---DVREILGTPDYVGE   87 (87)
Q Consensus        14 ~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~---~~~~~~gt~~y~aP   87 (87)
                      +.+..++.|++.++  .++|+++++|+|++|.|++++.+   ..+|++|||++.......   ......||+.|+||
T Consensus       139 ~~~~~i~~~i~~~l--~~lH~~~ivH~dlkp~Nil~~~~---~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aP  210 (321)
T 2qkw_B          139 EQRLEICIGAARGL--HYLHTRAIIHRDVKSINILLDEN---FVPKITDFGISKKGTELDQTHLSTVVKGTLGYIDP  210 (321)
T ss_dssp             HHHHHHHHHHHHHH--HHHHHTTEECSCCCSTTEEECTT---CCEEECCCTTCEECSSSSCCCCBCCCEEETTTCCH
T ss_pred             HHHHHHHHHHHHHH--HHhcCCCeecCCCCHHHEEECCC---CCEEEeecccccccccccccccccccCCCccccCH
Confidence            57889999999999  99999999999999999999874   789999999998753222   22345789999997

>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*

Probab=99.52  E-value=1.6e-14  Score=90.39  Aligned_cols=71  Identities=21%  Similarity=0.357  Sum_probs=58.9

Q ss_pred             cH-HHHHHHHHHHHHHHHHHHhh--hCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCccccccccccccccC
Q psy8010          12 IP-RLVAKVTVTLLGSLNHHFTS--THSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDVDVREILGTPDYVGE   87 (87)
Q Consensus        12 ~~-~~~~~~~~q~~~~l~~~~~h--~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~~~~~~~gt~~y~aP   87 (87)
                      ++ +.+..++.|++.++  .|+|  ..+++|+|+||+||++..++ ...+|++|||+++....  ......||+.|+||
T Consensus       154 ~~~~~~~~i~~qi~~al--~~lH~~~~~ivHrDlkp~NIll~~~~-~~~~kL~DFG~a~~~~~--~~~~~~~t~~y~aP  227 (382)
T 2vx3_A          154 VSLNLTRKFAQQMCTAL--LFLATPELSIIHCDLKPENILLCNPK-RSAIKIVDFGSSCQLGQ--RIYQYIQSRFYRSP  227 (382)
T ss_dssp             CCHHHHHHHHHHHHHHH--HHHTSTTTCEECCCCSGGGEEESSTT-SCCEEECCCTTCEETTC--CCCSSCSCGGGCCH
T ss_pred             CCHHHHHHHHHHHHHHH--HHhccCCCCEEcCCCCcccEEEecCC-CCcEEEEeccCceeccc--ccccccCCccccCh
Confidence            45 57899999999999  9999  47899999999999996432 36799999999987643  34456899999998

>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7

Probab=99.52  E-value=5.2e-15  Score=92.78  Aligned_cols=71  Identities=13%  Similarity=0.177  Sum_probs=49.8

Q ss_pred             cH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCcc-----ccccccccccc
Q psy8010          12 IP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDVD-----VREILGTPDYV   85 (87)
Q Consensus        12 ~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~~-----~~~~~gt~~y~   85 (87)
                      ++ +.+..++.|++.++  .|+|+++++|+|++|+|++++.+   ..+|++|||+++.+.....     .....|++.|+
T Consensus       189 ~~~~~~~~i~~qi~~aL--~~LH~~~ivHrDlkp~NIll~~~---~~~kL~DFG~a~~~~~~~~~~~~~~~~~~~~~~y~  263 (373)
T 3c1x_A          189 PTVKDLIGFGLQVAKGM--KFLASKKFVHRDLAARNCMLDEK---FTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWM  263 (373)
T ss_dssp             CBHHHHHHHHHHHHHHH--HHHHHTTCCCSCCCGGGEEECTT---CCEEECCC---------------------CCGGGS
T ss_pred             CCHHHHHHHHHHHHHHH--HHHHHCCEecCccchheEEECCC---CCEEEeeccccccccccccccccccCCCCCccccc
Confidence            44 57889999999999  99999999999999999999874   7899999999986533221     12346678899


Q ss_pred             cC
Q psy8010          86 GE   87 (87)
Q Consensus        86 aP   87 (87)
                      ||
T Consensus       264 aP  265 (373)
T 3c1x_A          264 AL  265 (373)
T ss_dssp             CH
T ss_pred             Ch
Confidence            87

>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*

Probab=99.52  E-value=2.1e-14  Score=88.26  Aligned_cols=73  Identities=19%  Similarity=0.340  Sum_probs=59.1

Q ss_pred             hcH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeC----------------CCCCcEEEEeeccceecCCCc
Q psy8010          11 RIP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGE----------------YPDCDVKLCDFGISRHLSRDV   73 (87)
Q Consensus        11 ~~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~----------------~~~~~~kl~dfg~~~~~~~~~   73 (87)
                      .++ +.+..++.|++.++  .|+|+++++|+|++|+||++...                .....++++|||++.....  
T Consensus       119 ~~~~~~~~~i~~qi~~~L--~~lH~~~ivH~Dlkp~NIll~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~~~~~~~--  194 (355)
T 2eu9_A          119 PYPLPHVRHMAYQLCHAL--RFLHENQLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVADFGSATFDHE--  194 (355)
T ss_dssp             CCCHHHHHHHHHHHHHHH--HHHHTTTEECCCCCGGGEEESCCCEEEEECCC-CCCEEEESCCCEEECCCTTCEETTS--
T ss_pred             CCCHHHHHHHHHHHHHHH--HHHHHCCcccCCCCHHHEEEecccccccccccccccccccCCCcEEEeecCccccccc--
Confidence            355 57899999999999  99999999999999999999421                1147899999999986433  


Q ss_pred             cccccccccccccC
Q psy8010          74 DVREILGTPDYVGE   87 (87)
Q Consensus        74 ~~~~~~gt~~y~aP   87 (87)
                      ......||+.|+||
T Consensus       195 ~~~~~~gt~~y~aP  208 (355)
T 2eu9_A          195 HHTTIVATRHYRPP  208 (355)
T ss_dssp             CCCSSCSCGGGCCH
T ss_pred             cccCCcCCCcccCC
Confidence            23456899999997

>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*

Probab=99.52  E-value=2.2e-14  Score=87.75  Aligned_cols=71  Identities=14%  Similarity=0.263  Sum_probs=59.9

Q ss_pred             cH-HHHHHHHHHHHHHHHHHHhhhC---CceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCc--cccccccccccc
Q psy8010          12 IP-RLVAKVTVTLLGSLNHHFTSTH---SLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDV--DVREILGTPDYV   85 (87)
Q Consensus        12 ~~-~~~~~~~~q~~~~l~~~~~h~~---~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~--~~~~~~gt~~y~   85 (87)
                      ++ ..+..++.|++.++  .++|++   +++|+|++|.|++++.+   ..++++|||++.......  ......||+.|+
T Consensus       128 ~~~~~~~~i~~~i~~~l--~~lH~~~~~~ivH~Dlkp~Nil~~~~---~~~kl~Dfg~~~~~~~~~~~~~~~~~gt~~y~  202 (326)
T 3uim_A          128 LDWPKRQRIALGSARGL--AYLHDHCDPKIIHRDVKAANILLDEE---FEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHI  202 (326)
T ss_dssp             CCHHHHHHHHHHHHHHH--HHHHHSSSSCEECCCCSGGGEEECTT---CCEEECCCSSCEECCSSSSCEECCCCSCGGGC
T ss_pred             CCHHHHHHHHHHHHHHH--HHHHhCCCCCeEeCCCchhhEEECCC---CCEEeccCccccccCcccccccccccCCcCcc
Confidence            44 47889999999999  999999   99999999999999885   789999999998764332  234457999999


Q ss_pred             cC
Q psy8010          86 GE   87 (87)
Q Consensus        86 aP   87 (87)
                      ||
T Consensus       203 aP  204 (326)
T 3uim_A          203 AP  204 (326)
T ss_dssp             CH
T ss_pred             CH
Confidence            97

>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*

Probab=99.52  E-value=3.7e-15  Score=97.37  Aligned_cols=65  Identities=14%  Similarity=0.186  Sum_probs=56.1

Q ss_pred             HHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCcc--------ccccccccccccC
Q psy8010          16 VAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDVD--------VREILGTPDYVGE   87 (87)
Q Consensus        16 ~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~~--------~~~~~gt~~y~aP   87 (87)
                      +..++.|++.++  .|+|+++++|+|+||+|++++.     .+|++|||+++.......        ....+||++||||
T Consensus       433 ~~~i~~qi~~aL--~~LH~~gIiHrDiKp~NILl~~-----~~kL~DFGla~~~~~~~~~~~~~~~~~~~~~GT~~y~AP  505 (540)
T 3en9_A          433 NLDIAYKIGEIV--GKLHKNDVIHNDLTTSNFIFDK-----DLYIIDFGLGKISNLDEDKAVDLIVFKKAVLSTHHEKFD  505 (540)
T ss_dssp             CTHHHHHHHHHH--HHHHHTTEECTTCCTTSEEESS-----SEEECCCTTCEECCCHHHHHHHHHHHHHHHHHHCGGGHH
T ss_pred             HHHHHHHHHHHH--HHHHHCcCccCCCCHHHEEECC-----eEEEEECccCEECCCccccccchhhhhhhhcCCCCcCCH
Confidence            457899999999  9999999999999999999986     699999999998754322        1367999999998

>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7

Probab=99.52  E-value=7.5e-15  Score=88.64  Aligned_cols=72  Identities=13%  Similarity=0.203  Sum_probs=58.9

Q ss_pred             hcH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCc-----ccccccccccc
Q psy8010          11 RIP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDV-----DVREILGTPDY   84 (87)
Q Consensus        11 ~~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~-----~~~~~~gt~~y   84 (87)
                      .++ +.+..++.|++.++  .++|+++++|+|++|+|++++.+   ..++++|||++..+....     ......|++.|
T Consensus       120 ~~~~~~~~~i~~qi~~~l--~~LH~~~i~H~dikp~Nili~~~---~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~y  194 (298)
T 3pls_A          120 NPTVKDLISFGLQVARGM--EYLAEQKFVHRDLAARNCMLDES---FTVKVADFGLARDILDREYYSVQQHRHARLPVKW  194 (298)
T ss_dssp             CCBHHHHHHHHHHHHHHH--HHHHHTTCCCSCCSGGGEEECTT---CCEEECCTTSSCTTTTGGGGCSCCSSCTTCGGGG
T ss_pred             CCCHHHHHHHHHHHHHHH--HHHHhCCcccCCCCcceEEEcCC---CcEEeCcCCCcccccCCcccccccCcCCCCCccc
Confidence            344 57889999999999  99999999999999999999874   789999999998653322     22345778889


Q ss_pred             ccC
Q psy8010          85 VGE   87 (87)
Q Consensus        85 ~aP   87 (87)
                      +||
T Consensus       195 ~aP  197 (298)
T 3pls_A          195 TAL  197 (298)
T ss_dssp             SCH
T ss_pred             cCh
Confidence            887

>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7

Probab=99.52  E-value=5.3e-15  Score=90.88  Aligned_cols=72  Identities=13%  Similarity=0.133  Sum_probs=58.0

Q ss_pred             hcH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCc---ccccccccccccc
Q psy8010          11 RIP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDV---DVREILGTPDYVG   86 (87)
Q Consensus        11 ~~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~---~~~~~~gt~~y~a   86 (87)
                      .++ +++..++.|++.++  .|+|+++++|+|++|+||+++.+   ..++++|||++.......   ......||+.|+|
T Consensus       170 ~l~~~~~~~i~~qi~~~l--~~LH~~~ivH~Dlkp~NIl~~~~---~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~a  244 (343)
T 1luf_A          170 PLSCAEQLCIARQVAAGM--AYLSERKFVHRDLATRNCLVGEN---MVVKIADFGLSRNIYSADYYKADGNDAIPIRWMP  244 (343)
T ss_dssp             CCCHHHHHHHHHHHHHHH--HHHHHTTCCCSCCSGGGEEECGG---GCEEECCCSCHHHHTGGGCBC----CCBCGGGCC
T ss_pred             CCCHHHHHHHHHHHHHHH--HHHHhCCeecCCCCcceEEECCC---CeEEEeecCCCcccccCccccccCCCcccceecC
Confidence            344 57888999999999  99999999999999999999875   789999999987653322   2234577889998


Q ss_pred             C
Q psy8010          87 E   87 (87)
Q Consensus        87 P   87 (87)
                      |
T Consensus       245 P  245 (343)
T 1luf_A          245 P  245 (343)
T ss_dssp             H
T ss_pred             h
Confidence            7

>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*

Probab=99.52  E-value=2.5e-14  Score=86.87  Aligned_cols=71  Identities=11%  Similarity=0.186  Sum_probs=59.2

Q ss_pred             cH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCcc---ccccccccccccC
Q psy8010          12 IP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDVD---VREILGTPDYVGE   87 (87)
Q Consensus        12 ~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~~---~~~~~gt~~y~aP   87 (87)
                      ++ +.+..++.|++.++  .|+|+++++|+|++|+||+++.+   ..++++|||++........   .....|++.|+||
T Consensus       147 ~~~~~~~~i~~qi~~~l--~~lH~~~ivH~dikp~NIli~~~---~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aP  221 (314)
T 2ivs_A          147 LTMGDLISFAWQISQGM--QYLAEMKLVHRDLAARNILVAEG---RKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAI  221 (314)
T ss_dssp             ECHHHHHHHHHHHHHHH--HHHHHTTEECCCCSGGGEEEETT---TEEEECCCTTCEECTTTSCEECSSCCCSCGGGCCH
T ss_pred             cCHHHHHHHHHHHHHHH--HHHHHCCCcccccchheEEEcCC---CCEEEccccccccccccccceeccCCCCcccccCh
Confidence            44 57899999999999  99999999999999999999975   7899999999987644332   2344677889987

>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*

Probab=99.52  E-value=1.8e-14  Score=88.91  Aligned_cols=72  Identities=21%  Similarity=0.436  Sum_probs=58.7

Q ss_pred             hcH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCc-----------ccccc
Q psy8010          11 RIP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDV-----------DVREI   78 (87)
Q Consensus        11 ~~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~-----------~~~~~   78 (87)
                      .++ +.+..++.|++.++  .++|+++++|+|++|+|++++.+   ..++++|||++.......           .....
T Consensus       108 ~~~~~~~~~~~~qi~~~L--~~LH~~~ivH~Dlkp~Nil~~~~---~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~~  182 (353)
T 2b9h_A          108 MLSDDHIQYFIYQTLRAV--KVLHGSNVIHRDLKPSNLLINSN---CDLKVCDFGLARIIDESAADNSEPTGQQSGMVEF  182 (353)
T ss_dssp             CCCHHHHHHHHHHHHHHH--HHHHHTTEECSCCCGGGEEECTT---CCEEECCCTTCEECC----------------CCC
T ss_pred             CCCHHHHHHHHHHHHHHH--HHHHHCCeecCCCCHHHeEEcCC---CcEEEEecccccccccccccccCccccccchhhc
Confidence            345 57899999999999  99999999999999999999875   789999999998764221           12345


Q ss_pred             ccccccccC
Q psy8010          79 LGTPDYVGE   87 (87)
Q Consensus        79 ~gt~~y~aP   87 (87)
                      +||+.|+||
T Consensus       183 ~gt~~y~aP  191 (353)
T 2b9h_A          183 VATRWYRAP  191 (353)
T ss_dssp             CCCGGGCCH
T ss_pred             cccccccCC
Confidence            889999997

>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}

Probab=99.52  E-value=2.3e-14  Score=95.38  Aligned_cols=68  Identities=22%  Similarity=0.388  Sum_probs=59.2

Q ss_pred             hcH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCccccccccccccccC
Q psy8010          11 RIP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDVDVREILGTPDYVGE   87 (87)
Q Consensus        11 ~~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~~~~~~~gt~~y~aP   87 (87)
                      .++ +++..++.|++.++  .|+|++|++|+|+||+||+++.    ..+|++|||++......   ....||+.|+||
T Consensus       178 ~l~~~~~~~~~~qi~~aL--~~lH~~giiHrDlkp~NIll~~----~~~kl~DFG~a~~~~~~---~~~~gt~~y~aP  246 (681)
T 2pzi_A          178 KLPVAEAIAYLLEILPAL--SYLHSIGLVYNDLKPENIMLTE----EQLKLIDLGAVSRINSF---GYLYGTPGFQAP  246 (681)
T ss_dssp             CCCHHHHHHHHHHHHHHH--HHHHHTTEECCCCSGGGEEECS----SCEEECCCTTCEETTCC---SCCCCCTTTSCT
T ss_pred             CCCHHHHHHHHHHHHHHH--HHHHHCCCeecccChHHeEEeC----CcEEEEecccchhcccC---CccCCCccccCH
Confidence            455 57899999999999  9999999999999999999987    37999999999876433   456899999998

>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*

Probab=99.52  E-value=3.5e-14  Score=85.83  Aligned_cols=72  Identities=17%  Similarity=0.300  Sum_probs=60.9

Q ss_pred             hcH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCC-CccccccccccccccC
Q psy8010          11 RIP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSR-DVDVREILGTPDYVGE   87 (87)
Q Consensus        11 ~~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~-~~~~~~~~gt~~y~aP   87 (87)
                      .++ +++..++.|++.++  .++|+++++|+|++|+|++++.+   ..++++|||++..... ........||+.|+||
T Consensus       111 ~~~~~~~~~i~~qi~~~l--~~lH~~~i~H~dl~p~Nil~~~~---~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aP  184 (294)
T 2rku_A          111 ALTEPEARYYLRQIVLGC--QYLHRNRVIHRDLKLGNLFLNED---LEVKIGDFGLATKVEYDGERKKVLCGTPNYIAP  184 (294)
T ss_dssp             SCCHHHHHHHHHHHHHHH--HHHHHTTEECCCCCGGGEEECTT---CCEEECCCTTCEECCSTTCCBCCCCSCCSSCCH
T ss_pred             CCCHHHHHHHHHHHHHHH--HHHHHCCccccCCChHhEEEcCC---CCEEEEeccCceecccCccccccccCCCCcCCc
Confidence            355 57899999999999  99999999999999999999875   7899999999987643 2333456899999987

>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*

Probab=99.52  E-value=1.4e-14  Score=89.08  Aligned_cols=72  Identities=24%  Similarity=0.438  Sum_probs=55.5

Q ss_pred             hcH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCC-ccccccccccccccC
Q psy8010          11 RIP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRD-VDVREILGTPDYVGE   87 (87)
Q Consensus        11 ~~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~-~~~~~~~gt~~y~aP   87 (87)
                      .++ +.+..++.|++.++  .++|+++++|+|++|.|++++.+   ..++++|||++..+... .......||+.|+||
T Consensus       120 ~~~~~~~~~~~~qi~~~l--~~LH~~~ivH~dlkp~Nil~~~~---~~~kl~Dfg~~~~~~~~~~~~~~~~~t~~y~aP  193 (331)
T 4aaa_A          120 GLDYQVVQKYLFQIINGI--GFCHSHNIIHRDIKPENILVSQS---GVVKLCDFGFARTLAAPGEVYDDEVATRWYRAP  193 (331)
T ss_dssp             CCCHHHHHHHHHHHHHHH--HHHHHTTCCCCCCCGGGEEECTT---SCEEECCCTTC------------CCCCCTTCCH
T ss_pred             CCCHHHHHHHHHHHHHHH--HHHHHCCEEccCcChheEEEcCC---CcEEEEeCCCceeecCCccccCCCcCCccccCc
Confidence            445 57889999999999  99999999999999999999875   78999999999876432 233456889999987

>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*

Probab=99.51  E-value=1.5e-14  Score=87.14  Aligned_cols=73  Identities=15%  Similarity=0.291  Sum_probs=58.7

Q ss_pred             hcH-HHHHHHHHHHHHHHHHHHhhhCC--ceecCCCCCceEeeeCCC--CCcEEEEeeccceecCCCccccccccccccc
Q psy8010          11 RIP-RLVAKVTVTLLGSLNHHFTSTHS--LYRSCSQPQNLVLTGEYP--DCDVKLCDFGISRHLSRDVDVREILGTPDYV   85 (87)
Q Consensus        11 ~~~-~~~~~~~~q~~~~l~~~~~h~~~--~~h~~~~~~~~l~~~~~~--~~~~kl~dfg~~~~~~~~~~~~~~~gt~~y~   85 (87)
                      .++ +.+..++.|++.++  .|+|+++  ++|+|++|+|++++..+.  ...++++|||+++....  ......||+.|+
T Consensus       118 ~~~~~~~~~~~~~l~~~l--~~lH~~~~~ivH~dikp~Nil~~~~~~~~~~~~kl~Dfg~~~~~~~--~~~~~~g~~~y~  193 (287)
T 4f0f_A          118 PIKWSVKLRLMLDIALGI--EYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQQSVH--SVSGLLGNFQWM  193 (287)
T ss_dssp             CCCHHHHHHHHHHHHHHH--HHHHTSSSCCBCSCCSGGGEEESCCCTTCSCCEEECCCTTCBCCSS--CEECCCCCCTTS
T ss_pred             CccHHHHHHHHHHHHHHH--HHHHhCCCCeecCCCCcceEEEeccCCCCceeEEeCCCCccccccc--cccccCCCcccc
Confidence            455 57889999999999  9999999  999999999999987521  12389999999875432  334568999999


Q ss_pred             cC
Q psy8010          86 GE   87 (87)
Q Consensus        86 aP   87 (87)
                      ||
T Consensus       194 aP  195 (287)
T 4f0f_A          194 AP  195 (287)
T ss_dssp             CG
T ss_pred             Cc
Confidence            98

>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*

Probab=99.51  E-value=1.1e-14  Score=89.06  Aligned_cols=71  Identities=20%  Similarity=0.440  Sum_probs=50.6

Q ss_pred             cH-HHHHHHHHHHHHHHHHHHhhhCC--ceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCc-cccccccccccccC
Q psy8010          12 IP-RLVAKVTVTLLGSLNHHFTSTHS--LYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDV-DVREILGTPDYVGE   87 (87)
Q Consensus        12 ~~-~~~~~~~~q~~~~l~~~~~h~~~--~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~-~~~~~~gt~~y~aP   87 (87)
                      ++ +.+..++.|++.++  .|+|+++  ++|+|++|+|++++.+   ..++++|||+++...... ......||+.|+||
T Consensus       134 ~~~~~~~~i~~qi~~aL--~~LH~~~~~ivH~Dikp~NIll~~~---~~~kL~Dfg~a~~~~~~~~~~~~~~gt~~y~aP  208 (309)
T 3p86_A          134 LDERRRLSMAYDVAKGM--NYLHNRNPPIVHRNLKSPNLLVDKK---YTVKVCDFGLSRLKASTFLSSKSAAGTPEWMAP  208 (309)
T ss_dssp             SCHHHHHHHHHHHHHHH--HHHHTSSSCCCCTTCCGGGEEECTT---CCEEECCCC-----------------CCTTSCH
T ss_pred             CCHHHHHHHHHHHHHHH--HHHHcCCCCEECCCCChhhEEEeCC---CcEEECCCCCCccccccccccccCCCCccccCh
Confidence            44 47889999999999  9999999  9999999999999875   789999999987643322 23456899999997

>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7

Probab=99.51  E-value=1.9e-14  Score=88.63  Aligned_cols=69  Identities=17%  Similarity=0.251  Sum_probs=58.1

Q ss_pred             HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCcc---ccccccccccccC
Q psy8010          14 RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDVD---VREILGTPDYVGE   87 (87)
Q Consensus        14 ~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~~---~~~~~gt~~y~aP   87 (87)
                      +.+..++.|++.++  .++|+++++|+|++|+||+++.+   ..++++|||++........   .....||+.|+||
T Consensus       172 ~~~~~i~~qi~~aL--~~LH~~~ivH~Dikp~NIll~~~---~~~kL~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aP  243 (344)
T 1rjb_A          172 EDLLCFAYQVAKGM--EFLEFKSCVHRDLAARNVLVTHG---KVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAP  243 (344)
T ss_dssp             HHHHHHHHHHHHHH--HHHHHTTEEETTCSGGGEEEETT---TEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCH
T ss_pred             HHHHHHHHHHHHHH--HHHHhCCcccCCCChhhEEEcCC---CcEEeCCCccCcccccCccceeccCccCccCccCH
Confidence            57888999999999  99999999999999999999975   7899999999986643322   2345778889987

>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A

Probab=99.51  E-value=1.1e-14  Score=90.88  Aligned_cols=70  Identities=20%  Similarity=0.425  Sum_probs=56.1

Q ss_pred             hcH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCccccccccccccccC
Q psy8010          11 RIP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDVDVREILGTPDYVGE   87 (87)
Q Consensus        11 ~~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~~~~~~~gt~~y~aP   87 (87)
                      .++ +.+..++.|++.++  .|+|+++++|+|++|+|++++.+   ..++++|||+++....  ......||+.|+||
T Consensus       140 ~~~~~~~~~i~~qi~~aL--~~LH~~~ivH~Dikp~NIll~~~---~~~kL~Dfg~a~~~~~--~~~~~~~t~~y~aP  210 (371)
T 4exu_A          140 EFSEEKIQYLVYQMLKGL--KYIHSAGVVHRDLKPGNLAVNED---CELKILDFGLARHADA--EMTGYVVTRWYRAP  210 (371)
T ss_dssp             CCCHHHHHHHHHHHHHHH--HHHHHTTCCCSCCCGGGEEECTT---CCEEECSTTCC----------CTTCCCTTSCH
T ss_pred             CCCHHHHHHHHHHHHHHH--HHHHHCCCcCCCcCHHHeEECCC---CCEEEEecCccccccc--CcCCcccCccccCH
Confidence            355 57899999999999  99999999999999999999885   7899999999886532  23456889999997

>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*

Probab=99.51  E-value=2.8e-14  Score=87.20  Aligned_cols=72  Identities=18%  Similarity=0.310  Sum_probs=59.1

Q ss_pred             cH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCC----------------CCcEEEEeeccceecCCCcc
Q psy8010          12 IP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYP----------------DCDVKLCDFGISRHLSRDVD   74 (87)
Q Consensus        12 ~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~----------------~~~~kl~dfg~~~~~~~~~~   74 (87)
                      ++ +.+..++.|++.++  .|+|+++++|+|++|+|+++...+.                +..++++|||++.....  .
T Consensus       115 ~~~~~~~~~~~qi~~~l--~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~~~~~~~--~  190 (339)
T 1z57_A          115 FRLDHIRKMAYQICKSV--NFLHSNKLTHTDLKPENILFVQSDYTEAYNPKIKRDERTLINPDIKVVDFGSATYDDE--H  190 (339)
T ss_dssp             CCHHHHHHHHHHHHHHH--HHHHHTTEECCCCCGGGEEESCCCEEEEEC----CEEEEESCCCEEECCCSSCEETTS--C
T ss_pred             CcHHHHHHHHHHHHHHH--HHHHHCCCcCCCCCHHHEEEeccccccccCCccccccccccCCCceEeeCcccccCcc--c
Confidence            44 57899999999999  9999999999999999999976321                25699999999986432  2


Q ss_pred             ccccccccccccC
Q psy8010          75 VREILGTPDYVGE   87 (87)
Q Consensus        75 ~~~~~gt~~y~aP   87 (87)
                      .....||+.|+||
T Consensus       191 ~~~~~gt~~y~aP  203 (339)
T 1z57_A          191 HSTLVSTRHYRAP  203 (339)
T ss_dssp             CCSSCSCGGGCCH
T ss_pred             cccccCCccccCh
Confidence            3456899999997

>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...

Probab=99.51  E-value=8.5e-15  Score=91.71  Aligned_cols=72  Identities=14%  Similarity=0.208  Sum_probs=48.9

Q ss_pred             hcH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCccc----cccccccccc
Q psy8010          11 RIP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDVDV----REILGTPDYV   85 (87)
Q Consensus        11 ~~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~~~----~~~~gt~~y~   85 (87)
                      .++ .++..++.|++.++  .|+|+++++|+|++|.||+++.+   ..+|++|||+++........    ....+++.|+
T Consensus       143 ~~~~~~~~~i~~qi~~aL--~~LH~~~ivH~Dlkp~NIll~~~---~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~y~  217 (373)
T 2qol_A          143 QFTVIQLVGMLRGIASGM--KYLSDMGYVHRDLAARNILINSN---LVCKVSDFGLGRVLEDDPEAAYTTRGGKIPIRWT  217 (373)
T ss_dssp             CSCHHHHHHHHHHHHHHH--HHHHHTTCCCSCCCGGGEEECTT---CCEEECCC----------------------CTTS
T ss_pred             CCCHHHHHHHHHHHHHHH--HHHHHCCeeCCCCCcceEEEcCC---CCEEECcCccccccccCCccceeccCCCcCCCcc
Confidence            455 57889999999999  99999999999999999999875   78999999999876433211    2234567899


Q ss_pred             cC
Q psy8010          86 GE   87 (87)
Q Consensus        86 aP   87 (87)
                      ||
T Consensus       218 aP  219 (373)
T 2qol_A          218 SP  219 (373)
T ss_dssp             CH
T ss_pred             Ch
Confidence            87

>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...

Probab=99.51  E-value=2.2e-14  Score=86.17  Aligned_cols=71  Identities=24%  Similarity=0.420  Sum_probs=56.0

Q ss_pred             hcH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCccccccccccccccC
Q psy8010          11 RIP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDVDVREILGTPDYVGE   87 (87)
Q Consensus        11 ~~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~~~~~~~gt~~y~aP   87 (87)
                      .++ +.+..++.|++.++  .++|+.+++|+|++|.|++++.+   ..++++|||++...... ......|++.|+||
T Consensus       105 ~~~~~~~~~~~~qi~~~l--~~LH~~~i~H~dlkp~Nili~~~---~~~~l~Dfg~~~~~~~~-~~~~~~~~~~y~aP  176 (279)
T 3fdn_A          105 KFDEQRTATYITELANAL--SYCHSKRVIHRDIKPENLLLGSA---GELKIADFGWSVHAPSS-RRTDLCGTLDYLPP  176 (279)
T ss_dssp             SCCHHHHHHHHHHHHHHH--HHHHTTTCEECCCCGGGEEECTT---SCEEECSCCEESCC---------CCCCTTCCH
T ss_pred             CCCHHHHHHHHHHHHHHH--HHHHhCCEecccCChHhEEEcCC---CCEEEEeccccccCCcc-cccccCCCCCccCH
Confidence            344 57899999999999  99999999999999999999875   78999999988654322 23456889999987

>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*

Probab=99.51  E-value=1.7e-14  Score=95.93  Aligned_cols=72  Identities=15%  Similarity=0.180  Sum_probs=56.5

Q ss_pred             hcH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCccc--cccccccccccC
Q psy8010          11 RIP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDVDV--REILGTPDYVGE   87 (87)
Q Consensus        11 ~~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~~~--~~~~gt~~y~aP   87 (87)
                      .++ +.+..++.|++.|+  .|+|+++++|+|++|+||+++.+   ..+|++|||+++........  ....|++.|+||
T Consensus       487 ~l~~~~~~~i~~qi~~aL--~~LH~~givHrDikp~NILl~~~---~~vkL~DFG~a~~~~~~~~~~~~~~~~t~~y~aP  561 (656)
T 2j0j_A          487 SLDLASLILYAYQLSTAL--AYLESKRFVHRDIAARNVLVSSN---DCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAP  561 (656)
T ss_dssp             TCCHHHHHHHHHHHHHHH--HHHHHTTCCCSCCSGGGEEEEET---TEEEECCCCCCCSCCC----------CCGGGCCH
T ss_pred             CCCHHHHHHHHHHHHHHH--HHHHhCCccccccchHhEEEeCC---CCEEEEecCCCeecCCCcceeccCCCCCcceeCH
Confidence            344 57888999999999  99999999999999999999985   78999999999876443322  234667889997

>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}

Probab=99.51  E-value=1.6e-14  Score=87.83  Aligned_cols=73  Identities=30%  Similarity=0.563  Sum_probs=52.9

Q ss_pred             hhcH-HHHHHHHHHHHHHHHHHHhhhC-CceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCccccccccccccccC
Q psy8010          10 ARIP-RLVAKVTVTLLGSLNHHFTSTH-SLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDVDVREILGTPDYVGE   87 (87)
Q Consensus        10 ~~~~-~~~~~~~~q~~~~l~~~~~h~~-~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~~~~~~~gt~~y~aP   87 (87)
                      ..++ +.+..++.|++.++  .++|++ +++|+|++|.|++++.+   ..++++|||++..+..........|++.|+||
T Consensus       119 ~~~~~~~~~~~~~~i~~~l--~~lH~~~~i~H~dlkp~Nil~~~~---~~~kl~dfg~~~~~~~~~~~~~~~~~~~y~aP  193 (318)
T 2dyl_A          119 GPIPERILGKMTVAIVKAL--YYLKEKHGVIHRDVKPSNILLDER---GQIKLCDFGISGRLVDDKAKDRSAGCAAYMAP  193 (318)
T ss_dssp             SCCCHHHHHHHHHHHHHHH--HHHHHHHCCCCCCCCGGGEEECTT---SCEEECCCTTC--------------CCTTCCH
T ss_pred             cCCCHHHHHHHHHHHHHHH--HHHHhhCCEEeCCCCHHHEEECCC---CCEEEEECCCchhccCCccccccCCCccccCh
Confidence            4455 57889999999999  999995 99999999999999875   78999999999876555445566899999987

>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}

Probab=99.50  E-value=1.6e-14  Score=88.24  Aligned_cols=71  Identities=15%  Similarity=0.261  Sum_probs=51.7

Q ss_pred             cH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCccc---cccccccccccC
Q psy8010          12 IP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDVDV---REILGTPDYVGE   87 (87)
Q Consensus        12 ~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~~~---~~~~gt~~y~aP   87 (87)
                      ++ +.+..++.|++.++  .|+|+++++|+|++|+|++++.+   ..++++|||+++........   ....+++.|+||
T Consensus       134 ~~~~~~~~i~~qi~~al--~~LH~~~ivH~Dikp~NIli~~~---~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aP  208 (323)
T 3qup_A          134 LPLQTLVRFMVDIACGM--EYLSSRNFIHRDLAARNCMLAED---MTVCVADFGLSRKIYSGDYYRQGCASKLPVKWLAL  208 (323)
T ss_dssp             CCHHHHHHHHHHHHHHH--HHHHHTTCCCSCCSGGGEEECTT---SCEEECCCCC-----------------CCGGGCCH
T ss_pred             cCHHHHHHHHHHHHHHH--HHHHcCCcccCCCCcceEEEcCC---CCEEEeeccccccccccccccccccccCcccccCc
Confidence            45 57899999999999  99999999999999999999875   78999999999876433322   234567789887

>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}

Probab=99.50  E-value=9e-15  Score=96.62  Aligned_cols=73  Identities=18%  Similarity=0.247  Sum_probs=55.9

Q ss_pred             hhcH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCccc----ccccccccc
Q psy8010          10 ARIP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDVDV----REILGTPDY   84 (87)
Q Consensus        10 ~~~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~~~----~~~~gt~~y   84 (87)
                      ..++ +.+..++.|++.|+  .|+|+++++|+|++|+||+++.+   ..+|++|||+++.+......    ....+++.|
T Consensus       431 ~~l~~~~~~~i~~qi~~~L--~~LH~~~iiHrDlkp~NILl~~~---~~vkL~DFGla~~~~~~~~~~~~~~~~~~~~~y  505 (613)
T 2ozo_A          431 EEIPVSNVAELLHQVSMGM--KYLEEKNFVHRNLAARNVLLVNR---HYAKISDFGLSKALGADDSYYTARSAGKWPLKW  505 (613)
T ss_dssp             TTSCHHHHHHHHHHHHHHH--HHHHHTTCCCSCCSGGGEEEEET---TEEEECCCSTTTTCC--------------CCTT
T ss_pred             CCCCHHHHHHHHHHHHHHH--HHHHHCCEEcCcCCHHHEEEcCC---CcEEEeeccCcccccCCCceeeeccCCCCccce
Confidence            3455 57899999999999  99999999999999999999985   78999999999876433221    223456789


Q ss_pred             ccC
Q psy8010          85 VGE   87 (87)
Q Consensus        85 ~aP   87 (87)
                      +||
T Consensus       506 ~AP  508 (613)
T 2ozo_A          506 YAP  508 (613)
T ss_dssp             SCH
T ss_pred             eCH
Confidence            987

>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}

Probab=99.50  E-value=3e-14  Score=87.67  Aligned_cols=71  Identities=21%  Similarity=0.506  Sum_probs=56.0

Q ss_pred             HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCc-----cccccccccccccC
Q psy8010          14 RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDV-----DVREILGTPDYVGE   87 (87)
Q Consensus        14 ~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~-----~~~~~~gt~~y~aP   87 (87)
                      +.+..++.|++.++  .|+|+++++|+|++|.|++++.++ ...++++|||++..+....     ......||+.|+||
T Consensus       168 ~~~~~i~~qi~~~l--~~LH~~~ivH~Dlkp~NIll~~~~-~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aP  243 (345)
T 3hko_A          168 KLISNIMRQIFSAL--HYLHNQGICHRDIKPENFLFSTNK-SFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAP  243 (345)
T ss_dssp             HHHHHHHHHHHHHH--HHHHHTTEECCCCCGGGEEESCSS-SCCEEECCCTTCEEGGGTTCC--------CCCGGGCCH
T ss_pred             HHHHHHHHHHHHHH--HHHHHCCccccCCChhhEEEecCC-CceEEEeeccccccccccCccccccccccCCCccccCc
Confidence            46788999999999  999999999999999999998642 2379999999998763211     12456899999997

>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}

Probab=99.50  E-value=1.9e-14  Score=87.98  Aligned_cols=72  Identities=29%  Similarity=0.487  Sum_probs=54.4

Q ss_pred             hcH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCc-cccccccccccccC
Q psy8010          11 RIP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDV-DVREILGTPDYVGE   87 (87)
Q Consensus        11 ~~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~-~~~~~~gt~~y~aP   87 (87)
                      .++ +.+..++.|++.++  .++|+++++|+|++|.|++++.+   ..++++|||++....... ......|++.|+||
T Consensus       125 ~~~~~~~~~i~~qi~~~l--~~lH~~~ivH~dlkp~NIl~~~~---~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aP  198 (326)
T 2x7f_A          125 TLKEEWIAYICREILRGL--SHLHQHKVIHRDIKGQNVLLTEN---AEVKLVDFGVSAQLDRTVGRRNTFIGTPYWMAP  198 (326)
T ss_dssp             CCCHHHHHHHHHHHHHHH--HHHHHTTCCCCCCSGGGEEECTT---CCEEECCCTTTC-------------CCGGGCCH
T ss_pred             CCCHHHHHHHHHHHHHHH--HHHHHCCccccCCcHHHEEEcCC---CCEEEeeCcCceecCcCccccccccCCccccCh
Confidence            345 57889999999999  99999999999999999999874   789999999988654322 23456899999987

>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=99.50  E-value=1.9e-14  Score=88.66  Aligned_cols=79  Identities=13%  Similarity=0.182  Sum_probs=55.6

Q ss_pred             HHHHHhhhcH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCcc----cccc
Q psy8010           4 FIITLVARIP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDVD----VREI   78 (87)
Q Consensus         4 ~~~~~~~~~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~~----~~~~   78 (87)
                      ++......++ +.+..++.|++.++  .++|+++++|+|++|.|++++.+   ..++++|||++........    ....
T Consensus       136 ~l~~~~~~~~~~~~~~i~~qi~~aL--~~LH~~~ivH~Dikp~NIl~~~~---~~~kl~Dfg~~~~~~~~~~~~~~~~~~  210 (333)
T 1mqb_A          136 FLREKDGEFSVLQLVGMLRGIAAGM--KYLANMNYVHRDLAARNILVNSN---LVCKVSDFGLSRVLEDDPEATYTTSGG  210 (333)
T ss_dssp             HHHHTTTCSCHHHHHHHHHHHHHHH--HHHHHTTCCCSCCCGGGEEECTT---CCEEECCCCC-----------------
T ss_pred             HHHhCCCCCCHHHHHHHHHHHHHHH--HHHHhCCeeCCCCChheEEECCC---CcEEECCCCcchhhccccccccccCCC
Confidence            3433334455 57899999999999  99999999999999999999874   7899999999987643221    1223


Q ss_pred             ccccccccC
Q psy8010          79 LGTPDYVGE   87 (87)
Q Consensus        79 ~gt~~y~aP   87 (87)
                      .+++.|+||
T Consensus       211 ~~~~~y~aP  219 (333)
T 1mqb_A          211 KIPIRWTAP  219 (333)
T ss_dssp             CCCGGGSCH
T ss_pred             CccccccCc
Confidence            557789887

>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A

Probab=99.50  E-value=2.8e-14  Score=91.21  Aligned_cols=69  Identities=10%  Similarity=0.208  Sum_probs=55.8

Q ss_pred             cH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCccccccccccccccC
Q psy8010          12 IP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDVDVREILGTPDYVGE   87 (87)
Q Consensus        12 ~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~~~~~~~gt~~y~aP   87 (87)
                      ++ +.+..++.|++.++  .|+|+++++|+|++|+|++++.+   ..+|++|||+++.....  .....+++.|+||
T Consensus       286 ~~~~~~~~~~~qi~~~l--~~LH~~~ivHrDlkp~Nill~~~---~~~kl~DfG~a~~~~~~--~~~~~~~~~y~aP  355 (450)
T 1k9a_A          286 LGGDCLLKFSLDVCEAM--EYLEGNNFVHRDLAARNVLVSED---NVAKVSDFGLTKEASST--QDTGKLPVKWTAP  355 (450)
T ss_dssp             CCHHHHHHHHHHHHHHH--HHHHHTTEECSCCCGGGEEECTT---SCEEECCCTTCEECC--------CCCTTTSCH
T ss_pred             CCHHHHHHHHHHHHHHH--HHHHhCCeeCCCCCHhhEEECCC---CCEEEeeCCCccccccc--ccCCCCCcceeCH
Confidence            45 57889999999999  99999999999999999999875   78999999999864322  2233667889987

>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*

Probab=99.50  E-value=1.5e-14  Score=95.91  Aligned_cols=72  Identities=13%  Similarity=0.213  Sum_probs=56.0

Q ss_pred             hcH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCcc----ccccccccccc
Q psy8010          11 RIP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDVD----VREILGTPDYV   85 (87)
Q Consensus        11 ~~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~~----~~~~~gt~~y~   85 (87)
                      .++ +.+..++.|++.++  .|+|+++++|+|+||+||+++.+   ..+|++|||+++.+..+..    .....|++.|+
T Consensus       465 ~l~~~~~~~i~~qi~~~L--~yLH~~~iiHrDLkp~NILl~~~---~~~kL~DFGla~~~~~~~~~~~~~~~~~~t~~y~  539 (635)
T 4fl3_A          465 HVKDKNIIELVHQVSMGM--KYLEESNFVHRDLAARNVLLVTQ---HYAKISDFGLSKALRADENYYKAQTHGKWPVKWY  539 (635)
T ss_dssp             TCCHHHHHHHHHHHHHHH--HHHHHTTCCCSCCSGGGEEEEET---TEEEECCTTHHHHTTC-------------CGGGS
T ss_pred             CCCHHHHHHHHHHHHHHH--HHHHHCCEeCCCCChHhEEEeCC---CCEEEEEcCCccccccCccccccccCCCCceeee
Confidence            344 57899999999999  99999999999999999999985   7899999999987644332    12345678899


Q ss_pred             cC
Q psy8010          86 GE   87 (87)
Q Consensus        86 aP   87 (87)
                      ||
T Consensus       540 AP  541 (635)
T 4fl3_A          540 AP  541 (635)
T ss_dssp             CH
T ss_pred             Ch
Confidence            87

>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...

Probab=99.50  E-value=3.4e-14  Score=86.72  Aligned_cols=69  Identities=12%  Similarity=0.198  Sum_probs=57.6

Q ss_pred             HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCcc---ccccccccccccC
Q psy8010          14 RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDVD---VREILGTPDYVGE   87 (87)
Q Consensus        14 ~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~~---~~~~~gt~~y~aP   87 (87)
                      +.+..++.|++.++  .++|+++++|+|++|.|++++.+   ..++++|||++........   .....||+.|+||
T Consensus       138 ~~~~~i~~qi~~~l--~~lH~~~i~H~dikp~NIli~~~---~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aP  209 (322)
T 1p4o_A          138 SKMIQMAGEIADGM--AYLNANKFVHRDLAARNCMVAED---FTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSP  209 (322)
T ss_dssp             HHHHHHHHHHHHHH--HHHHHTTCBCSCCSGGGEEECTT---CCEEECCTTCCCGGGGGGCEEGGGSSEECGGGCCH
T ss_pred             HHHHHHHHHHHHHH--HHHHHCCCccCCCccceEEEcCC---CeEEECcCccccccccccccccccCCCCCCCccCh
Confidence            57888999999999  99999999999999999999975   7899999999886543321   2344678889987

>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A

Probab=99.50  E-value=4.8e-14  Score=85.08  Aligned_cols=72  Identities=19%  Similarity=0.390  Sum_probs=59.0

Q ss_pred             hcH-HHHHHHHHHHHHHHHHHHhhhCC--ceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCccccccccccccccC
Q psy8010          11 RIP-RLVAKVTVTLLGSLNHHFTSTHS--LYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDVDVREILGTPDYVGE   87 (87)
Q Consensus        11 ~~~-~~~~~~~~q~~~~l~~~~~h~~~--~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~~~~~~~gt~~y~aP   87 (87)
                      .++ +.+..++.|++.++  .|+|+.+  ++|+|++|.|++++..  +..++++|||++..... .......||+.|+||
T Consensus       125 ~~~~~~~~~~~~qi~~~l--~~lH~~~~~i~H~dikp~Nil~~~~--~~~~kl~Dfg~~~~~~~-~~~~~~~~t~~y~aP  199 (290)
T 1t4h_A          125 VMKIKVLRSWCRQILKGL--QFLHTRTPPIIHRDLKCDNIFITGP--TGSVKIGDLGLATLKRA-SFAKAVIGTPEFMAP  199 (290)
T ss_dssp             SCCHHHHHHHHHHHHHHH--HHHHTSSSCCCCSCCCGGGEEESST--TSCEEECCTTGGGGCCT-TSBEESCSSCCCCCG
T ss_pred             CCCHHHHHHHHHHHHHHH--HHHHcCCCCEEECCCCHHHEEEECC--CCCEEEeeCCCcccccc-cccccccCCcCcCCH
Confidence            344 57889999999999  9999999  9999999999999743  37899999999865432 233456799999998

>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B

Probab=99.50  E-value=1.1e-14  Score=93.19  Aligned_cols=71  Identities=11%  Similarity=0.220  Sum_probs=57.6

Q ss_pred             cH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCccc--cccccccccccC
Q psy8010          12 IP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDVDV--REILGTPDYVGE   87 (87)
Q Consensus        12 ~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~~~--~~~~gt~~y~aP   87 (87)
                      ++ +.+..++.|++.++  .|+|+++++|+|++|+|++++.+   ..+|++|||+++........  ....+++.|+||
T Consensus       281 ~~~~~~~~~~~qi~~~l--~~LH~~~ivHrDlkp~Nill~~~---~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~y~aP  354 (454)
T 1qcf_A          281 QPLPKLIDFSAQIAEGM--AFIEQRNYIHRDLRAANILVSAS---LVCKIADFGLARVIEDNEYTAREGAKFPIKWTAP  354 (454)
T ss_dssp             CCHHHHHHHHHHHHHHH--HHHHHTTCCCSSCSGGGEEECTT---CCEEECSTTGGGGBCCHHHHTTCSSSSCGGGSCH
T ss_pred             CCHHHHHHHHHHHHHHH--HHHHhCCccCCCCCHHHEEECCC---CcEEEeeCCCceEcCCCceeccCCCcccccccCH
Confidence            44 57888999999999  99999999999999999999875   78999999999865432211  233557789987

>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...

Probab=99.49  E-value=2.8e-14  Score=86.71  Aligned_cols=71  Identities=17%  Similarity=0.341  Sum_probs=59.5

Q ss_pred             cH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCcc---ccccccccccccC
Q psy8010          12 IP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDVD---VREILGTPDYVGE   87 (87)
Q Consensus        12 ~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~~---~~~~~gt~~y~aP   87 (87)
                      ++ +.+..++.|++.++  .++|+++++|+|++|.|++++.+   ..++++|||++........   .....||+.|+||
T Consensus       145 ~~~~~~~~~~~qi~~al--~~lH~~~i~H~dikp~Nil~~~~---~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aP  219 (316)
T 2xir_A          145 LTLEHLICYSFQVAKGM--EFLASRKCIHRDLAARNILLSEK---NVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAP  219 (316)
T ss_dssp             EEHHHHHHHHHHHHHHH--HHHHHTTCCCSCCSGGGEEECGG---GCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCH
T ss_pred             cCHHHHHHHHHHHHHHH--HHHHhCCcccccCccceEEECCC---CCEEECCCccccccccCccceeccCCCcceeecCc
Confidence            45 57899999999999  99999999999999999999875   7899999999987643322   2345788899987

>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}

Probab=99.49  E-value=4.4e-14  Score=85.18  Aligned_cols=70  Identities=19%  Similarity=0.286  Sum_probs=57.5

Q ss_pred             HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCc-cccccccccccccC
Q psy8010          14 RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDV-DVREILGTPDYVGE   87 (87)
Q Consensus        14 ~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~-~~~~~~gt~~y~aP   87 (87)
                      +.+..++.|++.++  .++|+++++|+|++|.|++++..  +..++++|||++....... ......|++.|+||
T Consensus       122 ~~~~~~~~qi~~~l--~~lH~~~i~H~dl~p~Nil~~~~--~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aP  192 (295)
T 2clq_A          122 QTIGFYTKQILEGL--KYLHDNQIVHRDIKGDNVLINTY--SGVLKISDFGTSKRLAGINPCTETFTGTLQYMAP  192 (295)
T ss_dssp             HHHHHHHHHHHHHH--HHHHHTTEECCCCSGGGEEEETT--TCCEEECCTTTCEESCC-----CCCCCCGGGCCH
T ss_pred             HHHHHHHHHHHHHH--HHHHhCCEEccCCChhhEEEECC--CCCEEEeecccccccCCCCCcccccCCCccccCh
Confidence            46788899999999  99999999999999999999873  3689999999998764322 23456889999987

>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*

Probab=99.49  E-value=2.6e-14  Score=89.52  Aligned_cols=72  Identities=7%  Similarity=0.086  Sum_probs=58.7

Q ss_pred             hcH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCc--------cccccccc
Q psy8010          11 RIP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDV--------DVREILGT   81 (87)
Q Consensus        11 ~~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~--------~~~~~~gt   81 (87)
                      .++ ..+..++.|++.|+  .|+|+++++|+|+||+||+++.+   ..++++|||.+.......        .....+||
T Consensus       124 ~~~~~~~~~~~~qi~~~l--~~LH~~~ivHrDlkp~NIll~~~---~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~gt  198 (389)
T 3gni_B          124 GMNELAIAYILQGVLKAL--DYIHHMGYVHRSVKASHILISVD---GKVYLSGLRSNLSMISHGQRQRVVHDFPKYSVKV  198 (389)
T ss_dssp             CCCHHHHHHHHHHHHHHH--HHHHHTTEECCCCSGGGEEECTT---CCEEECCGGGCEECEETTEECSCBCCCCTTCTTT
T ss_pred             CCCHHHHHHHHHHHHHHH--HHHHhCCeecCCCCHHHEEEcCC---CCEEEcccccceeecccccccccccccccccccc
Confidence            345 57899999999999  99999999999999999999875   789999999877542211        11234889


Q ss_pred             cccccC
Q psy8010          82 PDYVGE   87 (87)
Q Consensus        82 ~~y~aP   87 (87)
                      +.|+||
T Consensus       199 ~~y~aP  204 (389)
T 3gni_B          199 LPWLSP  204 (389)
T ss_dssp             GGGSCH
T ss_pred             ccccCH
Confidence            999997

>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*

Probab=99.49  E-value=6.6e-14  Score=84.58  Aligned_cols=71  Identities=13%  Similarity=0.215  Sum_probs=57.8

Q ss_pred             cH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCccc----ccccccccccc
Q psy8010          12 IP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDVDV----REILGTPDYVG   86 (87)
Q Consensus        12 ~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~~~----~~~~gt~~y~a   86 (87)
                      ++ +.+..++.|++.++  .++|+++++|+|++|.|++++.+   ..++++|||++.........    ....|++.|+|
T Consensus       114 ~~~~~~~~i~~qi~~~l--~~LH~~~i~H~dikp~Nil~~~~---~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~a  188 (291)
T 1xbb_A          114 VKDKNIIELVHQVSMGM--KYLEESNFVHRDLAARNVLLVTQ---HYAKISDFGLSKALRADENYYKAQTHGKWPVKWYA  188 (291)
T ss_dssp             CCHHHHHHHHHHHHHHH--HHHHHTTEECSCCSGGGEEEEET---TEEEECCCTTCEECCTTCSEEEC----CCCGGGCC
T ss_pred             CCHHHHHHHHHHHHHHH--HHHHhCCeEcCCCCcceEEEeCC---CcEEEccCCcceeeccCCCcccccccCCCCceeeC
Confidence            44 57899999999999  99999999999999999999985   78999999999876443322    22356688988


Q ss_pred             C
Q psy8010          87 E   87 (87)
Q Consensus        87 P   87 (87)
                      |
T Consensus       189 P  189 (291)
T 1xbb_A          189 P  189 (291)
T ss_dssp             H
T ss_pred             h
Confidence            7

>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...

Probab=99.49  E-value=7.4e-14  Score=84.03  Aligned_cols=71  Identities=27%  Similarity=0.410  Sum_probs=59.8

Q ss_pred             hcH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCccccccccccccccC
Q psy8010          11 RIP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDVDVREILGTPDYVGE   87 (87)
Q Consensus        11 ~~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~~~~~~~gt~~y~aP   87 (87)
                      .++ +.+..++.|++.++  .++|+++++|+|++|+|++++.+   ..++++|||++...... ......|++.|+||
T Consensus       110 ~~~~~~~~~~~~qi~~~l--~~lH~~~i~H~dl~p~Nil~~~~---~~~kl~Dfg~~~~~~~~-~~~~~~~~~~y~aP  181 (284)
T 2vgo_A          110 RFDEQRSATFMEELADAL--HYCHERKVIHRDIKPENLLMGYK---GELKIADFGWSVHAPSL-RRRTMCGTLDYLPP  181 (284)
T ss_dssp             SCCHHHHHHHHHHHHHHH--HHHHTTTEECCCCSGGGEEECTT---CCEEECCCTTCEECSSS-CBCCCCSCGGGCCH
T ss_pred             CCCHHHHHHHHHHHHHHH--HHHHHCCceecCCCHHHEEEcCC---CCEEEecccccccCccc-ccccccCCCCcCCH
Confidence            355 57899999999999  99999999999999999999875   78999999998765432 23456889999987

>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A

Probab=99.49  E-value=3.5e-14  Score=88.03  Aligned_cols=72  Identities=18%  Similarity=0.302  Sum_probs=58.9

Q ss_pred             cH-HHHHHHHHHHHHHHHHHHhhhC-CceecCCCCCceEeeeCC---CCCcEEEEeeccceecCCCcccccccccccccc
Q psy8010          12 IP-RLVAKVTVTLLGSLNHHFTSTH-SLYRSCSQPQNLVLTGEY---PDCDVKLCDFGISRHLSRDVDVREILGTPDYVG   86 (87)
Q Consensus        12 ~~-~~~~~~~~q~~~~l~~~~~h~~-~~~h~~~~~~~~l~~~~~---~~~~~kl~dfg~~~~~~~~~~~~~~~gt~~y~a   86 (87)
                      ++ +.+..++.|++.++  .|+|++ +++|+|++|+||+++..+   ....++++|||++.....  ......||+.|+|
T Consensus       128 ~~~~~~~~i~~qi~~aL--~~lH~~~~ivH~Dikp~NIll~~~~~~~~~~~~kl~Dfg~a~~~~~--~~~~~~~t~~y~a  203 (373)
T 1q8y_A          128 IPLIYVKQISKQLLLGL--DYMHRRCGIIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWYDE--HYTNSIQTREYRS  203 (373)
T ss_dssp             CCHHHHHHHHHHHHHHH--HHHHHTTCEECSCCSGGGEEEEEEETTTTEEEEEECCCTTCEETTB--CCCSCCSCGGGCC
T ss_pred             CcHHHHHHHHHHHHHHH--HHHHhcCCEEecCCChHHeEEeccCCCcCcceEEEcccccccccCC--CCCCCCCCccccC
Confidence            55 57899999999999  999998 999999999999996532   123699999999987643  2344589999999


Q ss_pred             C
Q psy8010          87 E   87 (87)
Q Consensus        87 P   87 (87)
                      |
T Consensus       204 P  204 (373)
T 1q8y_A          204 P  204 (373)
T ss_dssp             H
T ss_pred             c
Confidence            7

>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*

Probab=99.49  E-value=2.3e-14  Score=87.80  Aligned_cols=72  Identities=26%  Similarity=0.512  Sum_probs=47.9

Q ss_pred             hcH-HHHHHHHHHHHHHHHHHHhhhC-CceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCccccccccccccccC
Q psy8010          11 RIP-RLVAKVTVTLLGSLNHHFTSTH-SLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDVDVREILGTPDYVGE   87 (87)
Q Consensus        11 ~~~-~~~~~~~~q~~~~l~~~~~h~~-~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~~~~~~~gt~~y~aP   87 (87)
                      .++ +.+..++.|++.++  .++|+. +++|+|++|.|++++.+   ..+|++|||++..+..........||+.|+||
T Consensus       121 ~~~~~~~~~i~~~i~~~l--~~lH~~~~ivH~dlkp~NIll~~~---~~~kl~Dfg~~~~~~~~~~~~~~~gt~~y~aP  194 (327)
T 3aln_A          121 VIPEEILGKITLATVKAL--NHLKENLKIIHRDIKPSNILLDRS---GNIKLCDFGISGQLVDSIAKTRDAGCRPYMAP  194 (327)
T ss_dssp             CCCHHHHHHHHHHHHHHH--HHHHHHHSCCCSCCCGGGEEEETT---TEEEECCCSSSCC-------------------
T ss_pred             cCcHHHHHHHHHHHHHHH--HHHhccCCEeECCCCHHHEEEcCC---CCEEEccCCCceecccccccccCCCCccccCc
Confidence            344 57889999999999  999998 99999999999999875   78999999999876554444455899999998

>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*

Probab=99.49  E-value=2.8e-14  Score=86.93  Aligned_cols=70  Identities=24%  Similarity=0.369  Sum_probs=53.7

Q ss_pred             cH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCcc---ccccccccccccC
Q psy8010          12 IP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDVD---VREILGTPDYVGE   87 (87)
Q Consensus        12 ~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~~---~~~~~gt~~y~aP   87 (87)
                      ++ ..+..++.|++.++  .++|+++++|+|++|.|++++.    ..++++|||++..+.....   .....|++.|+||
T Consensus       124 ~~~~~~~~i~~qi~~aL--~~LH~~~ivH~dlkp~NIl~~~----~~~kL~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aP  197 (313)
T 3cek_A          124 IDPWERKSYWKNMLEAV--HTIHQHGIVHSDLKPANFLIVD----GMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPP  197 (313)
T ss_dssp             CCHHHHHHHHHHHHHHH--HHHHHTTCCCCCCCGGGEEEET----TEEEECCCSSSCC--------------CCGGGCCH
T ss_pred             CCHHHHHHHHHHHHHHH--HHHHHCCceecCCCcccEEEEC----CeEEEeeccccccccCccccccccCCCCCCCcCCH
Confidence            44 57889999999999  9999999999999999999964    6899999999987643322   2345789999997

>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A

Probab=99.49  E-value=2.9e-14  Score=92.10  Aligned_cols=71  Identities=13%  Similarity=0.221  Sum_probs=58.1

Q ss_pred             cH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCccc--cccccccccccC
Q psy8010          12 IP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDVDV--REILGTPDYVGE   87 (87)
Q Consensus        12 ~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~~~--~~~~gt~~y~aP   87 (87)
                      ++ ..+..++.|++.++  .|+|+++++|+|++|.|++++.+   ..+|++|||+++........  ....+++.|+||
T Consensus       315 ~~~~~~~~i~~qi~~~L--~~LH~~~ivHrDlkp~NIll~~~---~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~y~aP  388 (495)
T 1opk_A          315 VSAVVLLYMATQISSAM--EYLEKKNFIHRNLAARNCLVGEN---HLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAP  388 (495)
T ss_dssp             SCHHHHHHHHHHHHHHH--HHHHHTTEECSCCSGGGEEECGG---GCEEECCTTCEECCTTCCEECCTTCCCCGGGCCH
T ss_pred             CCHHHHHHHHHHHHHHH--HHHHhCCcccCCCChhhEEECCC---CcEEEeecccceeccCCceeecCCCcCCcceeCH
Confidence            44 57889999999999  99999999999999999999875   78999999999876433222  233556789987

>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*

Probab=99.49  E-value=2.4e-14  Score=87.80  Aligned_cols=71  Identities=13%  Similarity=0.172  Sum_probs=56.3

Q ss_pred             cH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCccccccccccccccC
Q psy8010          12 IP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDVDVREILGTPDYVGE   87 (87)
Q Consensus        12 ~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~~~~~~~gt~~y~aP   87 (87)
                      ++ +.+..++.|++.++  .++|+++++|+|++|+|++++.+   ..++++|||++.............+++.|+||
T Consensus       139 ~~~~~~~~i~~qi~~aL--~~LH~~~ivH~dlkp~NIl~~~~---~~~kL~Dfg~~~~~~~~~~~~~~~~~~~y~aP  210 (327)
T 1fvr_A          139 LSSQQLLHFAADVARGM--DYLSQKQFIHRDLAARNILVGEN---YVAKIADFGLSRGQEVYVKKTMGRLPVRWMAI  210 (327)
T ss_dssp             SCHHHHHHHHHHHHHHH--HHHHHTTEECSCCSGGGEEECGG---GCEEECCTTCEESSCEECCC----CCTTTCCH
T ss_pred             CCHHHHHHHHHHHHHHH--HHHHhCCccCCCCccceEEEcCC---CeEEEcccCcCccccccccccCCCCCccccCh
Confidence            44 57899999999999  99999999999999999999875   68999999998754332233344667888887

>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*

Probab=99.48  E-value=6.8e-14  Score=84.91  Aligned_cols=71  Identities=18%  Similarity=0.346  Sum_probs=59.3

Q ss_pred             cH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCc---cccccccccccccC
Q psy8010          12 IP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDV---DVREILGTPDYVGE   87 (87)
Q Consensus        12 ~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~---~~~~~~gt~~y~aP   87 (87)
                      ++ ..+..++.|++.++  .++|+++++|+|++|.|++++.+   ..++++|||++.......   ......||+.|+||
T Consensus       130 ~~~~~~~~i~~~i~~~l--~~lH~~~i~H~dlkp~Nili~~~---~~~kl~Dfg~~~~~~~~~~~~~~~~~~g~~~y~aP  204 (307)
T 2nru_A          130 LSWHMRCKIAQGAANGI--NFLHENHHIHRDIKSANILLDEA---FTAKISDFGLARASEKFAQTVMTSRIVGTTAYMAP  204 (307)
T ss_dssp             CCHHHHHHHHHHHHHHH--HHHHHTTEECSCCCGGGEEECTT---CCEEECCCTTCEECCSCSSCEECSSCCSCGGGCCH
T ss_pred             CCHHHHHHHHHHHHHHH--HHHhcCCeecCCCCHHHEEEcCC---CcEEEeecccccccccccccccccccCCCcCcCCh
Confidence            44 57889999999999  99999999999999999999874   789999999988764322   12345899999997

>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=99.48  E-value=1.6e-14  Score=86.01  Aligned_cols=79  Identities=10%  Similarity=0.167  Sum_probs=60.8

Q ss_pred             HHHHHhhhcH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCc--ccccccc
Q psy8010           4 FIITLVARIP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDV--DVREILG   80 (87)
Q Consensus         4 ~~~~~~~~~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~--~~~~~~g   80 (87)
                      ++......++ +.+..++.|++.++  .++|+++++|+|++|+|++++.+   ..++++|||++.......  ......|
T Consensus        93 ~~~~~~~~~~~~~~~~~~~~i~~~l--~~lH~~~i~H~dl~p~Nili~~~---~~~kl~dfg~~~~~~~~~~~~~~~~~~  167 (267)
T 3t9t_A           93 YLRTQRGLFAAETLLGMCLDVCEGM--AYLEEACVIHRDLAARNCLVGEN---QVIKVSDFGMTRFVLDDQYTSSTGTKF  167 (267)
T ss_dssp             HHHHTTTCCCHHHHHHHHHHHHHHH--HHHHHTTCCCSSCCGGGEEECGG---GCEEECCTTGGGGBCCHHHHSTTSTTC
T ss_pred             HHhhCcccCCHHHHHHHHHHHHHHH--HHHHhCCcccCCCchheEEECCC---CCEEEcccccccccccccccccccccc
Confidence            3333334455 57889999999999  99999999999999999999875   789999999987653322  1123466


Q ss_pred             ccccccC
Q psy8010          81 TPDYVGE   87 (87)
Q Consensus        81 t~~y~aP   87 (87)
                      ++.|+||
T Consensus       168 ~~~y~aP  174 (267)
T 3t9t_A          168 PVKWASP  174 (267)
T ss_dssp             CGGGCCH
T ss_pred             cccccCh
Confidence            7788887

>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*

Probab=99.48  E-value=2.8e-14  Score=87.52  Aligned_cols=69  Identities=16%  Similarity=0.260  Sum_probs=57.7

Q ss_pred             HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCcc---ccccccccccccC
Q psy8010          14 RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDVD---VREILGTPDYVGE   87 (87)
Q Consensus        14 ~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~~---~~~~~gt~~y~aP   87 (87)
                      +.+..++.|++.++  .++|+++++|+|++|.|++++.+   ..++++|||++........   .....|++.|+||
T Consensus       164 ~~~~~~~~qi~~~l--~~lH~~~ivH~Dlkp~NIl~~~~---~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aP  235 (333)
T 2i1m_A          164 RDLLHFSSQVAQGM--AFLASKNCIHRDVAARNVLLTNG---HVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAP  235 (333)
T ss_dssp             HHHHHHHHHHHHHH--HHHHHTTEECSCCSGGGCEEEGG---GEEEBCCCGGGCCGGGCTTSEECSSCEECGGGSCH
T ss_pred             HHHHHHHHHHHHHH--HHHhcCCcccCCcccceEEECCC---CeEEECccccccccccccceeecCCCCCCccccCH
Confidence            57889999999999  99999999999999999999885   7899999999986533322   2345678889987

>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...

Probab=99.48  E-value=2.2e-14  Score=91.71  Aligned_cols=71  Identities=8%  Similarity=0.176  Sum_probs=53.6

Q ss_pred             cH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCcc--ccccccccccccC
Q psy8010          12 IP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDVD--VREILGTPDYVGE   87 (87)
Q Consensus        12 ~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~~--~~~~~gt~~y~aP   87 (87)
                      ++ +.+..++.|++.++  .|+|+++++|+|++|+|++++.+   ..+|++|||+++.......  .....+++.|+||
T Consensus       277 ~~~~~~~~i~~qi~~~l--~~LH~~~ivHrDlkp~Nill~~~---~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~y~aP  350 (452)
T 1fmk_A          277 LRLPQLVDMAAQIASGM--AYVERMNYVHRDLRAANILVGEN---LVCKVADFGLARLIEDNEYTARQGAKFPIKWTAP  350 (452)
T ss_dssp             CCHHHHHHHHHHHHHHH--HHHHHTTCCCSCCSGGGEEECGG---GCEEECCCCTTC--------------CCGGGSCH
T ss_pred             CCHHHHHHHHHHHHHHH--HHHHhCCeeCCCCChhhEEECCC---CCEEECCCccceecCCCceecccCCcccccccCH
Confidence            55 57889999999999  99999999999999999999875   7899999999987643321  1234567789987

>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}

Probab=99.48  E-value=6.8e-14  Score=85.14  Aligned_cols=72  Identities=14%  Similarity=0.154  Sum_probs=60.4

Q ss_pred             hcH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCccccccccccccccC
Q psy8010          11 RIP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDVDVREILGTPDYVGE   87 (87)
Q Consensus        11 ~~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~~~~~~~gt~~y~aP   87 (87)
                      .++ +.+..++.|++.++  .++|+++++|+|++|.|++++..  +..++++|||++...... ......|++.|+||
T Consensus       135 ~~~~~~~~~~~~qi~~~l--~~lH~~~i~H~dlkp~Nil~~~~--~~~~kl~dfg~~~~~~~~-~~~~~~~~~~y~aP  207 (312)
T 2iwi_A          135 PLGEGPSRCFFGQVVAAI--QHCHSRGVVHRDIKDENILIDLR--RGCAKLIDFGSGALLHDE-PYTDFDGTRVYSPP  207 (312)
T ss_dssp             SCCHHHHHHHHHHHHHHH--HHHHHHTEECCCCSGGGEEEETT--TTEEEECCCSSCEECCSS-CBCCCCSCTTTSCH
T ss_pred             CCCHHHHHHHHHHHHHHH--HHHHHCCeeecCCChhhEEEeCC--CCeEEEEEcchhhhcccC-cccccCCcccccCc
Confidence            345 57899999999999  99999999999999999999833  378999999999876543 34456789999987

>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*

Probab=99.48  E-value=3.7e-14  Score=87.09  Aligned_cols=71  Identities=11%  Similarity=0.218  Sum_probs=59.9

Q ss_pred             cH-HHHHHHHHHHHHHHHHHHhh--------hCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCc-----cccc
Q psy8010          12 IP-RLVAKVTVTLLGSLNHHFTS--------THSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDV-----DVRE   77 (87)
Q Consensus        12 ~~-~~~~~~~~q~~~~l~~~~~h--------~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~-----~~~~   77 (87)
                      ++ +.+..++.|++.++  .++|        +.+++|+|++|+|++++.+   ..++++|||++.......     ....
T Consensus       136 ~~~~~~~~i~~~i~~~l--~~lH~~~~~~~~~~~ivH~Dlkp~NIll~~~---~~~kL~Dfg~~~~~~~~~~~~~~~~~~  210 (342)
T 1b6c_B          136 VTVEGMIKLALSTASGL--AHLHMEIVGTQGKPAIAHRDLKSKNILVKKN---GTCCIADLGLAVRHDSATDTIDIAPNH  210 (342)
T ss_dssp             BCHHHHHHHHHHHHHHH--HHHHCCBCSTTCBCEEECSCCSGGGEEECTT---SCEEECCCTTCEEEETTTTEEEECCCS
T ss_pred             ccHHHHHHHHHHHHHHH--HHHHHHHhhhcccCCeeeCCCCHHHEEECCC---CCEEEEECCCceecccccccccccccc
Confidence            44 57889999999999  9999        8999999999999999875   789999999998764333     2245


Q ss_pred             cccccccccC
Q psy8010          78 ILGTPDYVGE   87 (87)
Q Consensus        78 ~~gt~~y~aP   87 (87)
                      ..||+.|+||
T Consensus       211 ~~gt~~y~aP  220 (342)
T 1b6c_B          211 RVGTKRYMAP  220 (342)
T ss_dssp             CCCCGGGCCH
T ss_pred             CCcCcccCCH
Confidence            5899999997

>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A

Probab=99.48  E-value=5e-14  Score=85.54  Aligned_cols=74  Identities=19%  Similarity=0.339  Sum_probs=59.8

Q ss_pred             hcH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCccccccccccccccC
Q psy8010          11 RIP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDVDVREILGTPDYVGE   87 (87)
Q Consensus        11 ~~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~~~~~~~gt~~y~aP   87 (87)
                      .++ +.+..++.|++.++  .++|+++++|+|++|+|+++...+++..++++|||++...... ......|++.|+||
T Consensus       102 ~~~~~~~~~~~~qi~~~l--~~lH~~~i~H~dikp~NIl~~~~~~~~~~kl~Dfg~~~~~~~~-~~~~~~~~~~y~aP  176 (304)
T 2jam_A          102 VYTEKDASLVIQQVLSAV--KYLHENGIVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQNG-IMSTACGTPGYVAP  176 (304)
T ss_dssp             CCCHHHHHHHHHHHHHHH--HHHHHTTCCCCSCCGGGCEESSSSTTCCEEBCSCSTTCCCCCB-TTHHHHSCCCBCCT
T ss_pred             CCCHHHHHHHHHHHHHHH--HHHHHCCccccCCCHHHEEEecCCCCCCEEEccCCcceecCCC-ccccccCCCCccCh
Confidence            344 57899999999999  9999999999999999999954333578999999998754332 33455799999998

>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}

Probab=99.48  E-value=2.9e-14  Score=88.24  Aligned_cols=70  Identities=20%  Similarity=0.436  Sum_probs=56.0

Q ss_pred             hcH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCccccccccccccccC
Q psy8010          11 RIP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDVDVREILGTPDYVGE   87 (87)
Q Consensus        11 ~~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~~~~~~~gt~~y~aP   87 (87)
                      .++ +.+..++.|++.++  .|+|+++++|+|++|.|++++.+   ..++++|||++.....  ......||+.|+||
T Consensus       122 ~~~~~~~~~i~~qi~~al--~~LH~~~ivH~dlkp~NIl~~~~---~~~kl~Dfg~~~~~~~--~~~~~~~t~~y~aP  192 (353)
T 3coi_A          122 KFSEEKIQYLVYQMLKGL--KYIHSAGVVHRDLKPGNLAVNED---CELKILDFGLARHADA--EMTGYVVTRWYRAP  192 (353)
T ss_dssp             CCCHHHHHHHHHHHHHHH--HHHHHTTCCCSSCCGGGEEECTT---CCEEECSTTCTTC----------CCSBCCSCH
T ss_pred             CCCHHHHHHHHHHHHHHH--HHHHHCCcccCCCCHHHEeECCC---CcEEEeecccccCCCC--CccccccCcCcCCH
Confidence            345 57899999999999  99999999999999999999875   7899999999876432  23456889999987

>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*

Probab=99.48  E-value=7.6e-15  Score=88.85  Aligned_cols=79  Identities=22%  Similarity=0.391  Sum_probs=59.0

Q ss_pred             HHHHHhhhcH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCC-ccccccccc
Q psy8010           4 FIITLVARIP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRD-VDVREILGT   81 (87)
Q Consensus         4 ~~~~~~~~~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~-~~~~~~~gt   81 (87)
                      ++......++ +.+..++.|++.++  .++|+.+++|+|++|.|++++.+   ..++++|||++...... .......|+
T Consensus       106 ~~~~~~~~~~~~~~~~~~~~i~~~l--~~lH~~~i~H~dlkp~Nil~~~~---~~~kl~Dfg~~~~~~~~~~~~~~~~~~  180 (302)
T 2j7t_A          106 IMLELDRGLTEPQIQVVCRQMLEAL--NFLHSKRIIHRDLKAGNVLMTLE---GDIRLADFGVSAKNLKTLQKRDSFIGT  180 (302)
T ss_dssp             HHHHHTSCCCHHHHHHHHHHHHHHH--HHHHHTTCCCCCCSGGGEEECTT---SCEEECCCHHHHHHHHHHHC-----CC
T ss_pred             HHHhhccCCCHHHHHHHHHHHHHHH--HHHhcCCcccCCCCHHHEEECCC---CCEEEEECCCCccccccccccccccCC
Confidence            3444444566 57899999999999  99999999999999999999875   78999999987543211 122345789


Q ss_pred             cccccC
Q psy8010          82 PDYVGE   87 (87)
Q Consensus        82 ~~y~aP   87 (87)
                      +.|+||
T Consensus       181 ~~y~aP  186 (302)
T 2j7t_A          181 PYWMAP  186 (302)
T ss_dssp             GGGCCH
T ss_pred             hhhcCC
Confidence            999987

>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}

Probab=99.48  E-value=5.7e-14  Score=85.67  Aligned_cols=72  Identities=15%  Similarity=0.262  Sum_probs=53.0

Q ss_pred             hcH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCc--cccccccccccccC
Q psy8010          11 RIP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDV--DVREILGTPDYVGE   87 (87)
Q Consensus        11 ~~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~--~~~~~~gt~~y~aP   87 (87)
                      .++ +.+..++.|++.++  .++|+++++|+|++|.|++++.+   ..++++|||++.......  ......|++.|+||
T Consensus       130 ~~~~~~~~~i~~qi~~~l--~~lH~~~i~H~dlkp~NIl~~~~---~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~y~aP  204 (309)
T 2h34_A          130 PLAPPRAVAIVRQIGSAL--DAAHAAGATHRDVKPENILVSAD---DFAYLVDFGIASATTDEKLTQLGNTVGTLYYMAP  204 (309)
T ss_dssp             SCCHHHHHHHHHHHHHHH--HHHHHTTCCCSCCCGGGEEECTT---SCEEECSCCC----------------CCGGGCCG
T ss_pred             CCCHHHHHHHHHHHHHHH--HHHHHCcCCcCCCChHHEEEcCC---CCEEEecCccCccccccccccccccCCCcCccCH
Confidence            345 57899999999999  99999999999999999999875   789999999987654332  22356789999987

>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*

Probab=99.47  E-value=8.4e-14  Score=84.45  Aligned_cols=72  Identities=21%  Similarity=0.395  Sum_probs=60.8

Q ss_pred             hcH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCc-cccccccccccccC
Q psy8010          11 RIP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDV-DVREILGTPDYVGE   87 (87)
Q Consensus        11 ~~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~-~~~~~~gt~~y~aP   87 (87)
                      .++ +.+..++.|++.++  .++|+++++|+|++|.|++++.+   ..++++|||++....... ......|++.|+||
T Consensus       115 ~~~~~~~~~~~~qi~~~l--~~lH~~~i~H~dl~p~Nil~~~~---~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aP  188 (303)
T 3a7i_A          115 PLDETQIATILREILKGL--DYLHSEKKIHRDIKAANVLLSEH---GEVKLADFGVAGQLTDTQIKRNTFVGTPFWMAP  188 (303)
T ss_dssp             CCCHHHHHHHHHHHHHHH--HHHHHTTEECCCCSGGGEEECTT---SCEEECCCTTCEECBTTBCCBCCCCSCGGGCCH
T ss_pred             CCCHHHHHHHHHHHHHHH--HHHHHCCCccCCCChheEEECCC---CCEEEeecccceecCccccccCccCCCcCccCH
Confidence            344 57889999999999  99999999999999999999875   789999999998764433 23456899999987

>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}

Probab=99.47  E-value=8.3e-14  Score=84.38  Aligned_cols=72  Identities=22%  Similarity=0.387  Sum_probs=60.2

Q ss_pred             hcH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCC---Ccccccccccccccc
Q psy8010          11 RIP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSR---DVDVREILGTPDYVG   86 (87)
Q Consensus        11 ~~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~---~~~~~~~~gt~~y~a   86 (87)
                      .++ +.+..++.|++.++  .++|+++++|+|++|.|++++.+   ..++++|||++.....   ........|++.|+|
T Consensus       105 ~~~~~~~~~~~~qi~~al--~~LH~~~i~H~dlkp~NIl~~~~---~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~a  179 (305)
T 2wtk_C          105 RFPVCQAHGYFCQLIDGL--EYLHSQGIVHKDIKPGNLLLTTG---GTLKISALGVAEALHPFAADDTCRTSQGSPAFQP  179 (305)
T ss_dssp             SCCHHHHHHHHHHHHHHH--HHHHHTTEECSCCSGGGEEECTT---CCEEECCCTTCEECCTTCSSCEECCCCSCGGGCC
T ss_pred             ccCHHHHHHHHHHHHHHH--HHHHHCCeeecCCCcccEEEcCC---CcEEeeccccccccCccccccccccCCCCCCCcC
Confidence            355 57889999999999  99999999999999999999875   7899999999987642   222345678999998


Q ss_pred             C
Q psy8010          87 E   87 (87)
Q Consensus        87 P   87 (87)
                      |
T Consensus       180 P  180 (305)
T 2wtk_C          180 P  180 (305)
T ss_dssp             H
T ss_pred             h
Confidence            7

>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}

Probab=99.47  E-value=7e-14  Score=84.93  Aligned_cols=72  Identities=24%  Similarity=0.310  Sum_probs=57.6

Q ss_pred             cH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCC----cccccccccccccc
Q psy8010          12 IP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRD----VDVREILGTPDYVG   86 (87)
Q Consensus        12 ~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~----~~~~~~~gt~~y~a   86 (87)
                      ++ +.+..++.|++.++  .++|+++++|+|++|+|++++..  +..++++|||++......    .......|++.|+|
T Consensus       117 ~~~~~~~~~~~qi~~~l--~~lH~~~i~H~dlkp~Nil~~~~--~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~a  192 (320)
T 2i6l_A          117 LLEEHARLFMYQLLRGL--KYIHSANVLHRDLKPANLFINTE--DLVLKIGDFGLARIMDPHYSHKGHLSEGLVTKWYRS  192 (320)
T ss_dssp             CCHHHHHHHHHHHHHHH--HHHHHTTCBCCCCSGGGEEEETT--TTEEEECCCTTCBCC--------CCCGGGSCCTTCC
T ss_pred             ccHHHHHHHHHHHHHHH--HHHHhCCEecCCCCHHHEEEcCC--CCeEEEccCccccccCCCcccccccccccccccccC
Confidence            44 57889999999999  99999999999999999999854  368999999998865322    12244577888998


Q ss_pred             C
Q psy8010          87 E   87 (87)
Q Consensus        87 P   87 (87)
                      |
T Consensus       193 P  193 (320)
T 2i6l_A          193 P  193 (320)
T ss_dssp             H
T ss_pred             c
Confidence            7

>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*

Probab=99.47  E-value=2.3e-14  Score=87.86  Aligned_cols=72  Identities=15%  Similarity=0.165  Sum_probs=57.7

Q ss_pred             HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCc---cccccccccccccC
Q psy8010          14 RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDV---DVREILGTPDYVGE   87 (87)
Q Consensus        14 ~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~---~~~~~~gt~~y~aP   87 (87)
                      ..+..++.|++.++  .++|+++++|+|++|.||+++.+++...++++|||++.......   ......|++.|+||
T Consensus       140 ~~~~~i~~qi~~al--~~LH~~~i~H~dlkp~NIli~~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aP  214 (327)
T 2yfx_A          140 LDLLHVARDIACGC--QYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPP  214 (327)
T ss_dssp             HHHHHHHHHHHHHH--HHHHHTTCCCSCCCGGGEEESCSSTTCCEEECCCHHHHHHHC------CCGGGSCGGGCCH
T ss_pred             HHHHHHHHHHHHHH--HHHhhCCeecCcCCHhHEEEecCCCcceEEECccccccccccccccccCCCcCCCcceeCH
Confidence            57889999999999  99999999999999999999965444679999999987543222   22345778899987

>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*

Probab=99.47  E-value=1.5e-13  Score=91.86  Aligned_cols=74  Identities=18%  Similarity=0.301  Sum_probs=63.7

Q ss_pred             cH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCccccccccccccccC
Q psy8010          12 IP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDVDVREILGTPDYVGE   87 (87)
Q Consensus        12 ~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~~~~~~~gt~~y~aP   87 (87)
                      ++ +.+..++.|++.++  .|+|+.|++|+|++|.||+++.++....++++|||++.............||+.|+||
T Consensus       118 lse~~i~~I~~QLl~aL--~yLHs~gIVHrDLKP~NILl~~~g~~~~vKL~DFG~a~~~~~~~~~~~~~gt~~Y~AP  192 (676)
T 3qa8_A          118 LKEGPIRTLLSDISSAL--RYLHENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGELCTEFVGTLQYLAP  192 (676)
T ss_dssp             CCSSHHHHHHHHHHHHH--HHHHHTTBCCCCCCSTTEEEECCSSSCEEEECSCCCCCBTTSCCCCCCCCSCCTTCSS
T ss_pred             CCHHHHHHHHHHHHHHH--HHHHHCCCccCCCCHHHeEeecCCCceeEEEcccccccccccccccccccCCcccCCh
Confidence            44 57889999999999  9999999999999999999997643445899999999887665555667899999998

>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...

Probab=99.47  E-value=9.7e-14  Score=85.36  Aligned_cols=71  Identities=13%  Similarity=0.206  Sum_probs=58.8

Q ss_pred             cH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCcc---ccccccccccccC
Q psy8010          12 IP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDVD---VREILGTPDYVGE   87 (87)
Q Consensus        12 ~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~~---~~~~~gt~~y~aP   87 (87)
                      ++ +.+..++.|++.++  .|+|+++++|+|++|.||+++.+   ..+|++|||++........   .....|++.|+||
T Consensus       154 ~~~~~~~~i~~qi~~aL--~~LH~~~ivH~Dlkp~NIll~~~---~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aP  228 (334)
T 2pvf_A          154 MTFKDLVSCTYQLARGM--EYLASQKCIHRDLAARNVLVTEN---NVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAP  228 (334)
T ss_dssp             CCHHHHHHHHHHHHHHH--HHHHHTTEECSCCSGGGEEECTT---CCEEECCCTTCEECTTTSSEECCSCCCCCGGGCCH
T ss_pred             CCHHHHHHHHHHHHHHH--HHHHhCCeeCCCCccceEEEcCC---CCEEEccccccccccccccccccCCCCcccceeCh
Confidence            44 57889999999999  99999999999999999999874   7899999999987654332   2334667889987

>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...

Probab=99.47  E-value=9.5e-14  Score=83.01  Aligned_cols=71  Identities=20%  Similarity=0.361  Sum_probs=59.5

Q ss_pred             cH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCc---cccccccccccccC
Q psy8010          12 IP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDV---DVREILGTPDYVGE   87 (87)
Q Consensus        12 ~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~---~~~~~~gt~~y~aP   87 (87)
                      ++ +.+..++.|++.++  .++|+++++|+|++|.|++++.+   ..++++|||.+..+....   ......|++.|+||
T Consensus       102 ~~~~~~~~~~~~i~~~l--~~lH~~~i~H~dl~p~Nil~~~~---~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aP  176 (276)
T 2yex_A          102 MPEPDAQRFFHQLMAGV--VYLHGIGITHRDIKPENLLLDER---DNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAP  176 (276)
T ss_dssp             CCHHHHHHHHHHHHHHH--HHHHHTTEECSCCSGGGEEECTT---CCEEECCCTTCEECEETTEECCBCCCCSCGGGCCG
T ss_pred             CCHHHHHHHHHHHHHHH--HHHHhCCeeccCCChHHEEEccC---CCEEEeeCCCccccCCCcchhcccCCccccCccCh
Confidence            44 57899999999999  99999999999999999999875   789999999988653222   23456889999988

>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ...

Probab=99.46  E-value=4.1e-14  Score=85.53  Aligned_cols=71  Identities=30%  Similarity=0.431  Sum_probs=59.4

Q ss_pred             cH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCC-ccccccccccccccC
Q psy8010          12 IP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRD-VDVREILGTPDYVGE   87 (87)
Q Consensus        12 ~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~-~~~~~~~gt~~y~aP   87 (87)
                      ++ +.+..++.|++.++  .++|++|++|+|++|+|++++.+   ..++++|||++...... .......||+.|+||
T Consensus       100 ~~~~~~~~~~~~i~~~l--~~lH~~~i~H~dlkp~Nili~~~---~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aP  172 (299)
T 2r3i_A          100 IPLPLIKSYLFQLLQGL--AFCHSHRVLHRDLKPQNLLINTE---GAIKLADFGLARAFGVPVRTYTHEVVTLWYRAP  172 (299)
T ss_dssp             CCHHHHHHHHHHHHHHH--HHHHHTTCCCCCCCGGGEEECTT---SCEEECSTTHHHHHCCCSBCTTSCBCCCTTCCH
T ss_pred             CCHHHHHHHHHHHHHHH--HHHHHCCccCCCCCHHHeEEcCC---CCEEECcchhhhhccCCccccCcccccccccCc
Confidence            44 57889999999999  99999999999999999999885   78999999998765432 233456789999987

>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*

Probab=99.46  E-value=1e-13  Score=84.85  Aligned_cols=71  Identities=11%  Similarity=0.166  Sum_probs=58.6

Q ss_pred             cH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCcc----cccccccccccc
Q psy8010          12 IP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDVD----VREILGTPDYVG   86 (87)
Q Consensus        12 ~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~~----~~~~~gt~~y~a   86 (87)
                      ++ +.+..++.|++.++  .++|+.+++|+|++|+|++++.+   ..++++|||++........    .....|++.|+|
T Consensus       131 ~~~~~~~~i~~~l~~~l--~~LH~~~ivH~Dikp~Nil~~~~---~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~y~a  205 (318)
T 3lxp_A          131 IGLAQLLLFAQQICEGM--AYLHAQHYIHRDLAARNVLLDND---RLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYA  205 (318)
T ss_dssp             CCHHHHHHHHHHHHHHH--HHHHHTTEECSCCSGGGEEECTT---CCEEECCGGGCEECCTTCSEEEC---CCCCGGGCC
T ss_pred             CCHHHHHHHHHHHHHHH--HHHHhCCccCCCCchheEEEcCC---CCEEECCccccccccccccccccccCCCCCceeeC
Confidence            44 57889999999999  99999999999999999999885   7899999999988754332    234577888998


Q ss_pred             C
Q psy8010          87 E   87 (87)
Q Consensus        87 P   87 (87)
                      |
T Consensus       206 P  206 (318)
T 3lxp_A          206 P  206 (318)
T ss_dssp             H
T ss_pred             h
Confidence            7

>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*

Probab=99.46  E-value=5.9e-14  Score=85.44  Aligned_cols=71  Identities=18%  Similarity=0.266  Sum_probs=52.7

Q ss_pred             cH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCcc---ccccccccccccC
Q psy8010          12 IP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDVD---VREILGTPDYVGE   87 (87)
Q Consensus        12 ~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~~---~~~~~gt~~y~aP   87 (87)
                      ++ +.+..++.|++.++  .|+|+++++|+|++|.||+++.+   ..++++|||++........   .....+++.|+||
T Consensus       144 ~~~~~~~~i~~qi~~aL--~~LH~~~ivH~dikp~NIli~~~---~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aP  218 (313)
T 3brb_A          144 IPLQTLLKFMVDIALGM--EYLSNRNFLHRDLAARNCMLRDD---MTVCVADFGLSKKIYSGDYYRQGRIAKMPVKWIAI  218 (313)
T ss_dssp             CCHHHHHHHHHHHHHHH--HHHHTTTCCCCCCSGGGEEECTT---SCEEECSCSCC----------------CCGGGSCH
T ss_pred             CCHHHHHHHHHHHHHHH--HHHHhCCcccCCCCcceEEEcCC---CcEEEeecCcceecccccccCcccccCCCccccCc
Confidence            45 57899999999999  99999999999999999999885   7899999999887643321   2334667788887

>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}

Probab=99.46  E-value=3.1e-14  Score=86.74  Aligned_cols=70  Identities=10%  Similarity=0.157  Sum_probs=54.8

Q ss_pred             cH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCC------Ccccccccccccc
Q psy8010          12 IP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSR------DVDVREILGTPDY   84 (87)
Q Consensus        12 ~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~------~~~~~~~~gt~~y   84 (87)
                      ++ +.+..++.|++.++  .++|+++++|+|++|+|++++.    ..++++|||++.....      ........|++.|
T Consensus       127 ~~~~~~~~i~~qi~~al--~~lH~~~i~H~dlkp~NIl~~~----~~~~l~Dfg~~~~~~~~~~~~~~~~~~~~~g~~~y  200 (319)
T 2y4i_B          127 LDVNKTRQIAQEIVKGM--GYLHAKGILHKDLKSKNVFYDN----GKVVITDFGLFSISGVLQAGRREDKLRIQNGWLCH  200 (319)
T ss_dssp             CCSHHHHHHHHHHHHHH--HHHHHTTCCCCCCCSTTEEEC------CCEECCCSCCC----------CCSCBCCSGGGGT
T ss_pred             CCHHHHHHHHHHHHHHH--HHHHhCCccccCCChhhEEEeC----CCEEEeecCCccccccccccccccccccCCCcccc
Confidence            45 68899999999999  9999999999999999999974    5799999998765421      1122345789999


Q ss_pred             ccC
Q psy8010          85 VGE   87 (87)
Q Consensus        85 ~aP   87 (87)
                      +||
T Consensus       201 ~aP  203 (319)
T 2y4i_B          201 LAP  203 (319)
T ss_dssp             SCH
T ss_pred             cCh
Confidence            987

>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*

Probab=99.46  E-value=1.4e-13  Score=84.79  Aligned_cols=71  Identities=21%  Similarity=0.425  Sum_probs=60.6

Q ss_pred             hcH-HHHHHHHHHHHHHHHHHHhhh-CCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCccccccccccccccC
Q psy8010          11 RIP-RLVAKVTVTLLGSLNHHFTST-HSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDVDVREILGTPDYVGE   87 (87)
Q Consensus        11 ~~~-~~~~~~~~q~~~~l~~~~~h~-~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~~~~~~~gt~~y~aP   87 (87)
                      .++ +.+..++.|++.++  .++|+ ++++|+|++|.|++++.+   ..++++|||++...... ......|++.|+||
T Consensus       147 ~~~~~~~~~i~~qi~~~l--~~lH~~~~i~H~dl~p~Nil~~~~---~~~kl~dfg~~~~~~~~-~~~~~~~~~~y~aP  219 (348)
T 2pml_X          147 FIPIQVIKCIIKSVLNSF--SYIHNEKNICHRDVKPSNILMDKN---GRVKLSDFGESEYMVDK-KIKGSRGTYEFMPP  219 (348)
T ss_dssp             CCCHHHHHHHHHHHHHHH--HHHHHTSCEECCCCCGGGEEECTT---SCEEECCCTTCEECBTT-EECSSCSCGGGCCG
T ss_pred             CCCHHHHHHHHHHHHHHH--HHHhccCCEeecCCChHhEEEcCC---CcEEEeccccccccccc-cccCCCCCcCccCc
Confidence            344 57899999999999  99999 999999999999999875   78999999999876443 34556889999988

>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...

Probab=99.45  E-value=1.3e-13  Score=82.63  Aligned_cols=71  Identities=10%  Similarity=0.226  Sum_probs=58.4

Q ss_pred             cH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCccc--cccccccccccC
Q psy8010          12 IP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDVDV--REILGTPDYVGE   87 (87)
Q Consensus        12 ~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~~~--~~~~gt~~y~aP   87 (87)
                      ++ +.+..++.|++.++  .++|+++++|+|++|.|++++.+   ..++++|||++.........  ....|++.|+||
T Consensus       106 ~~~~~~~~i~~qi~~~l--~~lH~~~i~H~dikp~Nil~~~~---~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~y~aP  179 (279)
T 1qpc_A          106 LTINKLLDMAAQIAEGM--AFIEERNYIHRDLRAANILVSDT---LSCKIADFGLARLIEDNEYTAREGAKFPIKWTAP  179 (279)
T ss_dssp             CCHHHHHHHHHHHHHHH--HHHHHTTEECSCCSGGGEEECTT---SCEEECCCTTCEECSSSCEECCTTCCCCTTTSCH
T ss_pred             CCHHHHHHHHHHHHHHH--HHHHHCCeeccCCCHhhEEEcCC---CCEEECCCcccccccCcccccccCCCCccCccCh
Confidence            44 57889999999999  99999999999999999999874   78999999999876543322  234567789887

>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}

Probab=99.45  E-value=8.2e-14  Score=84.85  Aligned_cols=71  Identities=15%  Similarity=0.149  Sum_probs=57.8

Q ss_pred             cH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCcc----------cccccc
Q psy8010          12 IP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDVD----------VREILG   80 (87)
Q Consensus        12 ~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~~----------~~~~~g   80 (87)
                      ++ +.+..++.|++.++  .++|+++++|+|++|.|++++.+   ..++++|||++........          .....|
T Consensus       131 ~~~~~~~~i~~qi~~~L--~~LH~~~ivH~dlkp~NIl~~~~---~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~g  205 (317)
T 2buj_A          131 LTEDQILWLLLGICRGL--EAIHAKGYAHRDLKPTNILLGDE---GQPVLMDLGSMNQACIHVEGSRQALTLQDWAAQRC  205 (317)
T ss_dssp             CCHHHHHHHHHHHHHHH--HHHHHTTEECCCCCGGGEEECTT---SCEEECCCSSCEESCEEEESHHHHHHHHHHHHHHS
T ss_pred             CCHHHHHHHHHHHHHHH--HHHHhCCcccCCCCHHHEEEcCC---CCEEEEecCcchhcccccccccccccccccccccC
Confidence            55 57899999999999  99999999999999999999875   7899999998876432111          123467


Q ss_pred             ccccccC
Q psy8010          81 TPDYVGE   87 (87)
Q Consensus        81 t~~y~aP   87 (87)
                      |+.|+||
T Consensus       206 t~~y~aP  212 (317)
T 2buj_A          206 TISYRAP  212 (317)
T ss_dssp             CGGGCCG
T ss_pred             CcccCCH
Confidence            8899987

>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*

Probab=99.44  E-value=1.1e-13  Score=83.13  Aligned_cols=69  Identities=10%  Similarity=0.208  Sum_probs=51.4

Q ss_pred             cH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCccccccccccccccC
Q psy8010          12 IP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDVDVREILGTPDYVGE   87 (87)
Q Consensus        12 ~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~~~~~~~gt~~y~aP   87 (87)
                      ++ +.+..++.|++.++  .++|+++++|+|++|.|++++.+   ..++++|||++......  .....+++.|+||
T Consensus       114 ~~~~~~~~~~~~i~~~l--~~lH~~~i~H~dlkp~Nil~~~~---~~~~l~Dfg~~~~~~~~--~~~~~~~~~y~aP  183 (278)
T 1byg_A          114 LGGDCLLKFSLDVCEAM--EYLEGNNFVHRDLAARNVLVSED---NVAKVSDFGLTKEASST--QDTGKLPVKWTAP  183 (278)
T ss_dssp             CCHHHHHHHHHHHHHHH--HHHHHTTCCCSCCSGGGEEECTT---SCEEECCCCC--------------CCTTTSCH
T ss_pred             CCHHHHHHHHHHHHHHH--HHHHhCCccccCCCcceEEEeCC---CcEEEeecccccccccc--ccCCCccccccCH
Confidence            44 56889999999999  99999999999999999999874   78999999998764322  2234677888887

>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7

Probab=99.44  E-value=3.3e-14  Score=92.62  Aligned_cols=71  Identities=8%  Similarity=0.176  Sum_probs=57.6

Q ss_pred             cH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCcc--ccccccccccccC
Q psy8010          12 IP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDVD--VREILGTPDYVGE   87 (87)
Q Consensus        12 ~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~~--~~~~~gt~~y~aP   87 (87)
                      ++ +.+..++.|++.+|  .|+|+++++|+|++|+||+++.+   ..+|++|||+++.+.....  .....+++.|+||
T Consensus       360 l~~~~~~~i~~qi~~~L--~~LH~~~ivHrDlkp~NIll~~~---~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~y~aP  433 (535)
T 2h8h_A          360 LRLPQLVDMAAQIASGM--AYVERMNYVHRDLRAANILVGEN---LVCKVADFGLARLIEDNEYTARQGAKFPIKWTAP  433 (535)
T ss_dssp             CCHHHHHHHHHHHHHHH--HHHHHTTCCCSCCSGGGEEECGG---GCEEECCTTSTTTCCCHHHHTTCSTTSCGGGSCH
T ss_pred             CCHHHHHHHHHHHHHHH--HHHHhCCeeCCCCCHhhEEEcCC---CcEEEcccccceecCCCceecccCCcCcccccCH
Confidence            55 57889999999999  99999999999999999999875   7899999999976543221  1233566789887

>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*

Probab=99.44  E-value=4.4e-14  Score=85.34  Aligned_cols=71  Identities=20%  Similarity=0.376  Sum_probs=55.7

Q ss_pred             cH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCc------ccccccccccc
Q psy8010          12 IP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDV------DVREILGTPDY   84 (87)
Q Consensus        12 ~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~------~~~~~~gt~~y   84 (87)
                      ++ +.+..++.|++.++  .++|+++++|+|++|.|++++.+   ..++++|||++.......      ......||+.|
T Consensus       118 ~~~~~~~~i~~qi~~~l--~~lH~~~i~H~dl~p~Nil~~~~---~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~y  192 (303)
T 2vwi_A          118 LDESTIATILREVLEGL--EYLHKNGQIHRDVKAGNILLGED---GSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCW  192 (303)
T ss_dssp             SCHHHHHHHHHHHHHHH--HHHHHTTCCCCCCSGGGEEECTT---CCEEECCCHHHHHCC---------------CCCTT
T ss_pred             CCHHHHHHHHHHHHHHH--HHHHhCCCCCCCCChhhEEEcCC---CCEEEEeccchheeccCCCccchhhhcccCCCccc
Confidence            45 57899999999999  99999999999999999999875   789999999987653321      12345789999


Q ss_pred             ccC
Q psy8010          85 VGE   87 (87)
Q Consensus        85 ~aP   87 (87)
                      +||
T Consensus       193 ~aP  195 (303)
T 2vwi_A          193 MAP  195 (303)
T ss_dssp             CCH
T ss_pred             cCH
Confidence            987

>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...

Probab=99.44  E-value=9.1e-14  Score=83.62  Aligned_cols=71  Identities=13%  Similarity=0.206  Sum_probs=58.5

Q ss_pred             cH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCcc--ccccccccccccC
Q psy8010          12 IP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDVD--VREILGTPDYVGE   87 (87)
Q Consensus        12 ~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~~--~~~~~gt~~y~aP   87 (87)
                      ++ ..+..++.|++.++  .++|+++++|+|++|+|++++.+   ..++++|||++........  .....|++.|+||
T Consensus       108 ~~~~~~~~i~~~i~~~l--~~lH~~~i~H~dikp~Nil~~~~---~~~~l~Dfg~~~~~~~~~~~~~~~~~~~~~y~aP  181 (288)
T 3kfa_A          108 VSAVVLLYMATQISSAM--EYLEKKNFIHRDLAARNCLVGEN---HLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAP  181 (288)
T ss_dssp             SCHHHHHHHHHHHHHHH--HHHHHHTCCCSCCSGGGEEECGG---GCEEECCCCGGGTSCSSSSEEETTEEECGGGCCH
T ss_pred             ccHhHHHHHHHHHHHHH--HHHHHCCccCCCCCcceEEEcCC---CCEEEccCccceeccCCccccccCCccccCcCCh
Confidence            44 57889999999999  99999999999999999999875   6899999999986643322  2345677889987

>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...

Probab=99.43  E-value=4.2e-14  Score=87.67  Aligned_cols=71  Identities=27%  Similarity=0.626  Sum_probs=56.7

Q ss_pred             hcH-HHHHHHHHHHHHHHHHHHhhhC-CceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCccccccccccccccC
Q psy8010          11 RIP-RLVAKVTVTLLGSLNHHFTSTH-SLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDVDVREILGTPDYVGE   87 (87)
Q Consensus        11 ~~~-~~~~~~~~q~~~~l~~~~~h~~-~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~~~~~~~gt~~y~aP   87 (87)
                      .++ +.+..++.|++.++  .|+|+. +++|+|++|.|++++.+   ..++++|||++..+... ......||+.|+||
T Consensus       127 ~~~~~~~~~i~~~i~~~l--~~lh~~~~i~H~dlkp~Nil~~~~---~~~kl~Dfg~~~~~~~~-~~~~~~gt~~y~aP  199 (360)
T 3eqc_A          127 RIPEQILGKVSIAVIKGL--TYLREKHKIMHRDVKPSNILVNSR---GEIKLCDFGVSGQLIDS-MANSFVGTRSYMSP  199 (360)
T ss_dssp             SCCHHHHHHHHHHHHHHH--HHHHHHHCCCCSCCSGGGEEECTT---CCEEECCCCCCHHHHHH-C----CCCCTTCCH
T ss_pred             CCCHHHHHHHHHHHHHHH--HHHHHhCCEEcCCccHHHEEECCC---CCEEEEECCCCcccccc-cccCCCCCCCeECH
Confidence            344 57889999999999  999986 99999999999999985   78999999998754221 23456889999987

>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0

Probab=99.42  E-value=1.6e-13  Score=81.96  Aligned_cols=74  Identities=16%  Similarity=0.358  Sum_probs=52.5

Q ss_pred             hcH-HHHHHHHHHHHHHHHHHHhhhCC---ceecCCCCCceEeeeCCC-----CCcEEEEeeccceecCCCccccccccc
Q psy8010          11 RIP-RLVAKVTVTLLGSLNHHFTSTHS---LYRSCSQPQNLVLTGEYP-----DCDVKLCDFGISRHLSRDVDVREILGT   81 (87)
Q Consensus        11 ~~~-~~~~~~~~q~~~~l~~~~~h~~~---~~h~~~~~~~~l~~~~~~-----~~~~kl~dfg~~~~~~~~~~~~~~~gt   81 (87)
                      +++ +.+..++.|++.++  .++|+++   ++|+|++|+|++++...+     ...++++|||++....... .....||
T Consensus       101 ~~~~~~~~~i~~~l~~~l--~~lH~~~~~~i~H~dikp~Nil~~~~~~~~~~~~~~~kl~Dfg~~~~~~~~~-~~~~~~~  177 (271)
T 3dtc_A          101 RIPPDILVNWAVQIARGM--NYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAREWHRTT-KMSAAGA  177 (271)
T ss_dssp             CCCHHHHHHHHHHHHHHH--HHHHHSSSSCCCCSCCSGGGEEESSCCSSSCCSSCCEEECCCCC--------------CC
T ss_pred             CCCHHHHHHHHHHHHHHH--HHHHhCCCCceeecCCchHHEEEecccccccccCcceEEccCCccccccccc-ccCCCCc
Confidence            344 57899999999999  9999999   889999999999986311     3679999999998654332 2345889


Q ss_pred             cccccC
Q psy8010          82 PDYVGE   87 (87)
Q Consensus        82 ~~y~aP   87 (87)
                      +.|+||
T Consensus       178 ~~y~aP  183 (271)
T 3dtc_A          178 YAWMAP  183 (271)
T ss_dssp             GGGSCH
T ss_pred             cceeCH
Confidence            999987

>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*

Probab=99.42  E-value=5.6e-14  Score=84.21  Aligned_cols=71  Identities=31%  Similarity=0.517  Sum_probs=57.5

Q ss_pred             cH-HHHHHHHHHHHHHHHHHHhhhCC-----ceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCcc-cccccccccc
Q psy8010          12 IP-RLVAKVTVTLLGSLNHHFTSTHS-----LYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDVD-VREILGTPDY   84 (87)
Q Consensus        12 ~~-~~~~~~~~q~~~~l~~~~~h~~~-----~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~~-~~~~~gt~~y   84 (87)
                      ++ +.+..++.|++.++  .++|+.+     ++|+|++|+|++++.+   ..++++|||++........ .....|++.|
T Consensus       108 ~~~~~~~~i~~~i~~~l--~~lH~~~~~~~~ivH~dl~p~NIl~~~~---~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y  182 (279)
T 2w5a_A          108 LDEEFVLRVMTQLTLAL--KECHRRSDGGHTVLHRDLKPANVFLDGK---QNVKLGDFGLARILNHDTSFAKTFVGTPYY  182 (279)
T ss_dssp             CCHHHHHHHHHHHHHHH--HHHHHHC------CCCCCSGGGEEECSS---SCEEECCCCHHHHC---CHHHHHHHSCCTT
T ss_pred             CCHHHHHHHHHHHHHHH--HHHhcccCCCCeeEEeccchhhEEEcCC---CCEEEecCchheeeccccccccccCCCccc
Confidence            55 57899999999999  9999999     9999999999999875   7899999999876643322 2456889999


Q ss_pred             ccC
Q psy8010          85 VGE   87 (87)
Q Consensus        85 ~aP   87 (87)
                      +||
T Consensus       183 ~aP  185 (279)
T 2w5a_A          183 MSP  185 (279)
T ss_dssp             CCH
T ss_pred             cCh
Confidence            987

>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*

Probab=99.42  E-value=1.5e-13  Score=83.61  Aligned_cols=71  Identities=31%  Similarity=0.482  Sum_probs=49.5

Q ss_pred             cH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCc-cccccccccccccC
Q psy8010          12 IP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDV-DVREILGTPDYVGE   87 (87)
Q Consensus        12 ~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~-~~~~~~gt~~y~aP   87 (87)
                      ++ +.+..++.|++.++  .++|+++++|+|++|.|++++.+   ..++++|||++....... ......|++.|+||
T Consensus       133 ~~~~~~~~i~~qi~~~l--~~LH~~~i~H~dl~p~NIl~~~~---~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aP  205 (310)
T 2wqm_A          133 IPERTVWKYFVQLCSAL--EHMHSRRVMHRDIKPANVFITAT---GVVKLGDLGLGRFFSSKTTAAHSLVGTPYYMSP  205 (310)
T ss_dssp             CCHHHHHHHHHHHHHHH--HHHHHTTCCCCCCCGGGEEECTT---SCEEECCC------------------CCSSCCH
T ss_pred             CCHHHHHHHHHHHHHHH--HHHhhCCeeCCCCcHHHEEEcCC---CCEEEEeccceeeecCCCccccccCCCeeEeCh
Confidence            44 57889999999999  99999999999999999999874   789999999988654332 22445789999987

>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}

Probab=99.38  E-value=4.6e-13  Score=81.67  Aligned_cols=68  Identities=16%  Similarity=0.331  Sum_probs=50.0

Q ss_pred             HHHHHHHHHHHHHHHHHHhhh---CCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCccccccccccccccC
Q psy8010          14 RLVAKVTVTLLGSLNHHFTST---HSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDVDVREILGTPDYVGE   87 (87)
Q Consensus        14 ~~~~~~~~q~~~~l~~~~~h~---~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~~~~~~~gt~~y~aP   87 (87)
                      +.+..++.|++.++  .|+|+   ++++|+|++|+|++++.+  ...+|++|||++......  .....||+.|+||
T Consensus       102 ~~~~~~~~qi~~~l--~~LH~~~~~~ivH~dlkp~NIll~~~--~~~~kl~Dfg~~~~~~~~--~~~~~gt~~y~aP  172 (307)
T 2eva_A          102 AHAMSWCLQCSQGV--AYLHSMQPKALIHRDLKPPNLLLVAG--GTVLKICDFGTACDIQTH--MTNNKGSAAWMAP  172 (307)
T ss_dssp             HHHHHHHHHHHHHH--HHHHTCSSSCCCCCCCSGGGEEEETT--TTEEEECCCCC--------------CCTTSSCH
T ss_pred             HHHHHHHHHHHHHH--HHHHhCCCCCeecCCCChhHEEEeCC--CCEEEEcccccccccccc--cccCCCCCceECh
Confidence            57788899999999  99999   899999999999999875  234899999998765322  2344789999987

>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*

Probab=99.30  E-value=3.2e-12  Score=76.03  Aligned_cols=67  Identities=9%  Similarity=0.204  Sum_probs=55.7

Q ss_pred             cH-HHHHHHHHHHHHHHHHHHhhhCC--ceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCccccccccccccccC
Q psy8010          12 IP-RLVAKVTVTLLGSLNHHFTSTHS--LYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDVDVREILGTPDYVGE   87 (87)
Q Consensus        12 ~~-~~~~~~~~q~~~~l~~~~~h~~~--~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~~~~~~~gt~~y~aP   87 (87)
                      ++ +.+..++.|++.++  .|+|+++  ++|+|++|+|++++.+   ..+++.||+++....    .....||+.|+||
T Consensus       108 ~~~~~~~~i~~qi~~~l--~~lH~~~~~i~H~dikp~Nil~~~~---~~~~l~~~~~~~~~~----~~~~~~t~~y~aP  177 (271)
T 3kmu_A          108 VDQSQAVKFALDMARGM--AFLHTLEPLIPRHALNSRSVMIDED---MTARISMADVKFSFQ----SPGRMYAPAWVAP  177 (271)
T ss_dssp             CCHHHHHHHHHHHHHHH--HHHTTSSSCCTTCCCSGGGEEECTT---SCEEEEGGGSCCTTS----CTTCBSCGGGSCH
T ss_pred             CCHHHHHHHHHHHHHHH--HHHhcCCCceecCCCccceEEEcCC---cceeEEeccceeeec----ccCccCCccccCh
Confidence            45 58899999999999  9999999  9999999999999874   678898888765422    2345788999987

>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*

Probab=99.25  E-value=1.6e-11  Score=74.56  Aligned_cols=50  Identities=14%  Similarity=0.100  Sum_probs=45.3

Q ss_pred             HHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecC
Q psy8010          15 LVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLS   70 (87)
Q Consensus        15 ~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~   70 (87)
                      ....++.|++.++  .++|++|++|+|++|.|++++ +   ..++++|||+++...
T Consensus       194 ~~~~i~~qi~~~l--~~lH~~giiHrDlkp~NILl~-~---~~vkl~DFG~a~~~~  243 (282)
T 1zar_A          194 NPDEVLDMILEEV--AKFYHRGIVHGDLSQYNVLVS-E---EGIWIIDFPQSVEVG  243 (282)
T ss_dssp             CHHHHHHHHHHHH--HHHHHTTEECSCCSTTSEEEE-T---TEEEECCCTTCEETT
T ss_pred             hHHHHHHHHHHHH--HHHHHCCCEeCCCCHHHEEEE-C---CcEEEEECCCCeECC
Confidence            4567899999999  999999999999999999999 5   789999999998754

>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*

Probab=99.22  E-value=2.6e-11  Score=73.55  Aligned_cols=58  Identities=19%  Similarity=0.411  Sum_probs=50.9

Q ss_pred             cH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCC
Q psy8010          12 IP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSR   71 (87)
Q Consensus        12 ~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~   71 (87)
                      ++ +.+..++.|++.++  .|+|+++++|+|++|+|++++..+++..++++|||++.....
T Consensus       114 ~~~~~~~~i~~qi~~~l--~~lH~~~i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~  172 (299)
T 3m2w_A          114 FTEREASEIMKSIGEAI--QYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTG  172 (299)
T ss_dssp             CBHHHHHHHHHHHHHHH--HHHHHTTEECCCCSGGGEEESSSSTTCCEEECCCTTCEECTT
T ss_pred             CCHHHHHHHHHHHHHHH--HHHHhCCcccCCCCHHHEEEecCCCCCcEEEecccccccccc
Confidence            55 58899999999999  999999999999999999999854347899999999987643

>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*

Probab=99.11  E-value=1.5e-10  Score=69.31  Aligned_cols=49  Identities=14%  Similarity=0.120  Sum_probs=44.7

Q ss_pred             HHHHHHHHHHHHHHHHHhh-hCCceecCCCCCceEeeeCCCCCcEEEEeeccceecC
Q psy8010          15 LVAKVTVTLLGSLNHHFTS-THSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLS   70 (87)
Q Consensus        15 ~~~~~~~q~~~~l~~~~~h-~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~   70 (87)
                      .+..++.|++.++  .++| +.|++|+|++|.|++++.     .++++|||++....
T Consensus       171 ~~~~i~~qi~~~l--~~lH~~~givHrDlkp~NILl~~-----~~~liDFG~a~~~~  220 (258)
T 1zth_A          171 DVEGIFNDVVENV--KRLYQEAELVHADLSEYNIMYID-----KVYFIDMGQAVTLR  220 (258)
T ss_dssp             CHHHHHHHHHHHH--HHHHHTSCEECSSCSTTSEEESS-----SEEECCCTTCEETT
T ss_pred             HHHHHHHHHHHHH--HHHHHHCCEEeCCCCHHHEEEcC-----cEEEEECcccccCC
Confidence            6788999999999  9999 999999999999999975     58999999998764

>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A

Probab=98.87  E-value=3.1e-09  Score=64.39  Aligned_cols=49  Identities=14%  Similarity=0.096  Sum_probs=42.8

Q ss_pred             cHHHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeecc
Q psy8010          12 IPRLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGI   65 (87)
Q Consensus        12 ~~~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~   65 (87)
                      .++++..++.|++.++  .|+|++|++|+|+||+|++++.+   +.+++.+++.
T Consensus       127 ~~~~~~~i~~ql~~aL--~~lH~~givH~Dikp~NIll~~~---g~~kl~~~~~  175 (286)
T 3uqc_A          127 SPVGAIRAMQSLAAAA--DAAHRAGVALSIDHPSRVRVSID---GDVVLAYPAT  175 (286)
T ss_dssp             CHHHHHHHHHHHHHHH--HHHHHTTCCCCCCSGGGEEEETT---SCEEECSCCC
T ss_pred             ChHHHHHHHHHHHHHH--HHHHHCCCccCCCCcccEEEcCC---CCEEEEeccc
Confidence            3467888999999999  99999999999999999999985   7788876654

>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A

Probab=98.59  E-value=6.8e-08  Score=61.43  Aligned_cols=52  Identities=13%  Similarity=0.052  Sum_probs=41.9

Q ss_pred             HHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCC-------cEEEEeecccee
Q psy8010          15 LVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDC-------DVKLCDFGISRH   68 (87)
Q Consensus        15 ~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~-------~~kl~dfg~~~~   68 (87)
                      .+..++.|++.++  .++|.+|++|+|+||.||+++.+++..       .+.++||+=+..
T Consensus       206 ~~~~l~~qll~~l--~~lH~~gIVHrDLKp~NILl~~dgd~~d~~~~~~~~~iID~~Q~V~  264 (397)
T 4gyi_A          206 DPASLYADLIALI--LRLAKHGLIHGDFNEFNILIREEKDAEDPSSITLTPIIIXFPQMVS  264 (397)
T ss_dssp             CHHHHHHHHHHHH--HHHHHTTEECSCCSTTSEEEEEEECSSCTTSEEEEEEECCCTTCEE
T ss_pred             HHHHHHHHHHHHH--HHHHHCCCcCCCCCHHHEEEeCCCCcccccccccceEEEEeCCccc
Confidence            4667889999999  999999999999999999998763110       277899875443

>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6

Probab=96.93  E-value=0.0012  Score=38.61  Aligned_cols=30  Identities=10%  Similarity=-0.025  Sum_probs=24.2

Q ss_pred             CceecCCCCCceEeeeCCCCCcEEEEeecccee
Q psy8010          36 SLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRH   68 (87)
Q Consensus        36 ~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~   68 (87)
                      .++|+|+++.|++++..   ..+.+.||+.+..
T Consensus       185 ~l~HgDl~~~Nil~~~~---~~~~liD~~~a~~  214 (264)
T 1nd4_A          185 VVTHGDACLPNIMVENG---RFSGFIDCGRLGV  214 (264)
T ss_dssp             EEECSSCCGGGEEEETT---EEEEECCCTTCEE
T ss_pred             EEECCCCCCCcEEEECC---cEEEEEcchhccc
Confidence            49999999999999753   3456999998654

>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*

Probab=96.69  E-value=0.0026  Score=37.51  Aligned_cols=30  Identities=13%  Similarity=0.052  Sum_probs=23.8

Q ss_pred             CCceecCCCCCceEeeeCCCCCcEEEEeeccce
Q psy8010          35 HSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISR   67 (87)
Q Consensus        35 ~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~   67 (87)
                      ..++|+|+++.|+++...   ....++||+.+.
T Consensus       183 ~~l~HgDl~~~Nil~~~~---~~~~lIDwe~a~  212 (263)
T 3tm0_A          183 LVFSHGDLGDSNIFVKDG---KVSGFIDLGRSG  212 (263)
T ss_dssp             EEEECSSCCTTSEEEETT---EEEEECCCTTCE
T ss_pred             ceEECCCCCcCcEEEECC---cEEEEEEchhcc
Confidence            458999999999999752   345699998764

>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}

Probab=96.43  E-value=0.0066  Score=37.51  Aligned_cols=33  Identities=18%  Similarity=0.213  Sum_probs=25.5

Q ss_pred             CCceecCCCCCceEeeeCCCCCcEEEEeecccee
Q psy8010          35 HSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRH   68 (87)
Q Consensus        35 ~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~   68 (87)
                      ..++|+|+++.|+++..++. .-+.+.||+.+..
T Consensus       216 ~~lvHgD~~~~Nil~~~~~~-~v~~viDwe~a~~  248 (359)
T 3dxp_A          216 TSIVHGDYRLDNLMFHPTEP-RVLAVLDWELSTL  248 (359)
T ss_dssp             CEEECSSCSGGGEEECSSSS-CEEEECCCTTCEE
T ss_pred             ceEEeCCCCCCcEEEeCCCC-cEEEEECcccccc
Confidence            46899999999999987521 2358999987763

>2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis}

Probab=95.64  E-value=0.037  Score=33.53  Aligned_cols=31  Identities=13%  Similarity=0.100  Sum_probs=26.1

Q ss_pred             hCCceecCCCCCceEeeeCCCCCcEEEEeeccce
Q psy8010          34 THSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISR   67 (87)
Q Consensus        34 ~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~   67 (87)
                      ...++|+|+.+.|++++.+   ..+.+.||+.+.
T Consensus       221 ~~~l~HgD~~~~Nil~~~~---~~~~lIDfe~a~  251 (346)
T 2q83_A          221 SPNLCHQDYGTGNTLLGEN---EQIWVIDLDTVS  251 (346)
T ss_dssp             SCCEECSSCSTTSEEECGG---GCEEECCCTTCE
T ss_pred             cCceecCCCCcccEEEeCC---CcEEEEehhhcc
Confidence            4679999999999999764   568999998764

>2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana}

Probab=94.28  E-value=0.073  Score=33.69  Aligned_cols=32  Identities=13%  Similarity=0.132  Sum_probs=26.6

Q ss_pred             hhCCceecCCCCCceEeeeCCCCCcEEEEeecccee
Q psy8010          33 STHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRH   68 (87)
Q Consensus        33 h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~   68 (87)
                      +...++|.|+.+.|++++.+   . +.+.||+.+..
T Consensus       230 ~~~~liHGDl~~~Nil~~~~---~-~~lID~e~a~~  261 (420)
T 2pyw_A          230 RAQALIHGDLHTGSVMVTQD---S-TQVIDPEFSFY  261 (420)
T ss_dssp             BCCEEECSCCSGGGEEECSS---C-EEECCCTTCEE
T ss_pred             CCCeEEecCCCCCcEEEeCC---C-CEEEeCccccc
Confidence            46789999999999999874   3 89999987653

>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A

Probab=92.09  E-value=0.075  Score=32.02  Aligned_cols=33  Identities=15%  Similarity=0.192  Sum_probs=25.6

Q ss_pred             CCceecCCCCCceEeeeCCCCCcEEEEeecccee
Q psy8010          35 HSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRH   68 (87)
Q Consensus        35 ~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~   68 (87)
                      ..++|.|+.+.|++++.+. ...+.+.||+.+..
T Consensus       191 ~~~~HgD~~~~N~l~~~~~-~~~~~~iD~~~~~~  223 (304)
T 3sg8_A          191 PCLIHNDFSSDHILFDTEK-NTICGIIDFGDAAI  223 (304)
T ss_dssp             CEEECSCCCGGGEEEETTT-TEEEEECCCTTCEE
T ss_pred             ceeEeCCCCcccEEEeCCC-CCEEEEEeCCCCcc
Confidence            4689999999999998731 14578999987654

>2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6

Probab=91.69  E-value=0.073  Score=32.18  Aligned_cols=30  Identities=17%  Similarity=0.139  Sum_probs=24.1

Q ss_pred             CCceecCCCCCceEeeeCCCCCcEEEEeeccce
Q psy8010          35 HSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISR   67 (87)
Q Consensus        35 ~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~   67 (87)
                      .+++|.|+.+.|+++..+   ....+.||+.+.
T Consensus       187 ~~liHgDl~~~Nil~~~~---~~~~lIDf~~a~  216 (322)
T 2ppq_A          187 AGVIHADLFQDNVFFLGD---ELSGLIDFYFAC  216 (322)
T ss_dssp             EEEECSCCCGGGEEEETT---EEEEECCCTTCE
T ss_pred             cccCCCCCCccCEEEeCC---ceEEEecchhcc
Confidence            578999999999999863   334799998665

>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*

Probab=91.56  E-value=0.13  Score=30.29  Aligned_cols=30  Identities=13%  Similarity=0.018  Sum_probs=23.7

Q ss_pred             CceecCCCCCceEeeeCCCCCcEEEEeecccee
Q psy8010          36 SLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRH   68 (87)
Q Consensus        36 ~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~   68 (87)
                      .++|.|+.+.|+++...   ....+.||+.+..
T Consensus       194 ~l~HGDl~~~Nil~~~~---~~~~viDwe~a~~  223 (272)
T 4gkh_A          194 VVTHGDFSLDNLIFDEG---KLIGCIDVGRVGI  223 (272)
T ss_dssp             EEECSCCCTTSEEEETT---EEEEECCCTTCEE
T ss_pred             EEEcCCCCCCeEEEECC---eEEEEEECccccc
Confidence            48899999999999863   4456899987653

>3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A*

Probab=90.86  E-value=0.17  Score=30.67  Aligned_cols=35  Identities=17%  Similarity=0.191  Sum_probs=25.7

Q ss_pred             hCCceecCCCCCceEeeeCCCCCc-EEEEeecccee
Q psy8010          34 THSLYRSCSQPQNLVLTGEYPDCD-VKLCDFGISRH   68 (87)
Q Consensus        34 ~~~~~h~~~~~~~~l~~~~~~~~~-~kl~dfg~~~~   68 (87)
                      ...++|.|+.+.|+++..++.... ..+.||+.+..
T Consensus       189 ~~~~~HgD~~~~N~l~~~~~~~~~~~~~iD~~~a~~  224 (306)
T 3tdw_A          189 TPRLIHGDLSPDHFLTNLNSRQTPLTGIIDFGDAAI  224 (306)
T ss_dssp             CCEEECSCCSGGGEEECTTCSSCCEEEECCCTTCEE
T ss_pred             CCeeEeCCCCcccEEEecCCCCCceEEEEehhhcCC
Confidence            456899999999999986211234 47999987653

>3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A*

Probab=89.78  E-value=0.14  Score=31.43  Aligned_cols=31  Identities=13%  Similarity=0.095  Sum_probs=25.0

Q ss_pred             hCCceecCCCCCceEeeeCCCCCcEEEEeeccce
Q psy8010          34 THSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISR   67 (87)
Q Consensus        34 ~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~   67 (87)
                      ...++|.|+.+.|+++..   ...+.++||+.+.
T Consensus       221 ~~~l~HgDl~~~Nil~~~---~~~~~vIDwe~a~  251 (357)
T 3ats_A          221 EPVLLWGDARVGNVLYRD---FQPVAVLDWEMVA  251 (357)
T ss_dssp             CCEEECSSCSGGGEEEET---TEEEEECCGGGCE
T ss_pred             CceEEeCCCCCCeEEEeC---CcEEEEEcccccc
Confidence            457899999999999984   2446899998765

>2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A*

Probab=89.27  E-value=0.2  Score=31.30  Aligned_cols=30  Identities=10%  Similarity=0.125  Sum_probs=25.0

Q ss_pred             hCCceecCCCCCceEeeeCCCCCcEEEEeeccce
Q psy8010          34 THSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISR   67 (87)
Q Consensus        34 ~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~   67 (87)
                      ...++|.|+.+.|+++..+    .+.+.||..+.
T Consensus       226 ~~~L~HGDl~~~Nil~~~~----~~~lID~e~a~  255 (397)
T 2olc_A          226 AETLIHGDLHTGSIFASEH----ETKVIDPEFAF  255 (397)
T ss_dssp             CCEEECSCCSGGGEEECSS----CEEECCCTTCE
T ss_pred             CCceeeCCCCcCcEEEeCC----CeEEEeCcccc
Confidence            4678999999999999763    48899997665

>3csv_A Aminoglycoside phosphotransferase; YP_614837.1, phosphotransferase enzyme family, structural genomics, JOIN for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP}

Probab=89.13  E-value=0.21  Score=30.45  Aligned_cols=35  Identities=20%  Similarity=0.121  Sum_probs=26.2

Q ss_pred             hCCceecCCCCCceEeeeCCC-CCcEEEEeecccee
Q psy8010          34 THSLYRSCSQPQNLVLTGEYP-DCDVKLCDFGISRH   68 (87)
Q Consensus        34 ~~~~~h~~~~~~~~l~~~~~~-~~~~kl~dfg~~~~   68 (87)
                      ...++|+|+.+.|+++..+.+ ...+.+.||+.+..
T Consensus       182 ~~~lvHgD~~~~Nil~~~~~~~~~~~~lIDf~~a~~  217 (333)
T 3csv_A          182 DMVFVHRDFHAQNLLWLPEREGLARVGVIDFQDAKL  217 (333)
T ss_dssp             CCEEECSCCSGGGEEECTTSCGGGGEEECCCTTCEE
T ss_pred             CCeeEeCCcCcccEEeccCcCCCCCeEEEeCCCcCc
Confidence            457999999999999975210 14588999987653

>3c5i_A Choline kinase; choline, kinase, malaria, transferase, structural genomics, structural genomics consortium; 2.20A {Plasmodium knowlesi} PDB: 3fi8_A*

Probab=88.23  E-value=0.26  Score=30.50  Aligned_cols=29  Identities=24%  Similarity=0.229  Sum_probs=23.4

Q ss_pred             CCceecCCCCCceEeeeCCCCCcEEEEeeccce
Q psy8010          35 HSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISR   67 (87)
Q Consensus        35 ~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~   67 (87)
                      ..++|.|+.+.|+++..    ..+.++||..+.
T Consensus       212 ~~l~HgDl~~~Nil~~~----~~~~lID~e~a~  240 (369)
T 3c5i_A          212 IVFCHNDLQENNIINTN----KCLRLIDFEYSG  240 (369)
T ss_dssp             EEEECSCCCGGGEEECC-----CEEECCCTTCE
T ss_pred             eEEEeCCCCcccEEecC----CcEEEEEecCCC
Confidence            46899999999999875    348999997654

>3i1a_A Spectinomycin phosphotransferase; protein kinase, aminoglycoside phosphotransferase, antibiotic resistance; HET: MES PG4; 1.70A {Legionella pneumophila} PDB: 3i0q_A* 3i0o_A* 3q2m_A*

Probab=87.00  E-value=1.8  Score=26.56  Aligned_cols=31  Identities=16%  Similarity=0.168  Sum_probs=25.4

Q ss_pred             hCCceecCCCCCceEeeeCCCCCcEEEEeeccce
Q psy8010          34 THSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISR   67 (87)
Q Consensus        34 ~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~   67 (87)
                      ...++|.|+.+.|+++..+   ..+.+.||+.+.
T Consensus       205 ~~~~~HgD~~~~N~l~~~~---~~~~~iD~e~~~  235 (339)
T 3i1a_A          205 KYVLCHSDIHAGNVLVGNE---ESIYIIDWDEPM  235 (339)
T ss_dssp             GCEEECSCCCGGGEEECGG---GCEEECCCSSCE
T ss_pred             CceeEeCCCCcCCEEEeCC---CeEEEEECCCCe
Confidence            3578999999999999864   468899997655

>3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 2.55A {Mesorhizobium loti}

Probab=86.94  E-value=0.4  Score=28.80  Aligned_cols=29  Identities=17%  Similarity=0.125  Sum_probs=23.1

Q ss_pred             CCceecCCCCCceEeeeCCCCCcEEEEeeccce
Q psy8010          35 HSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISR   67 (87)
Q Consensus        35 ~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~   67 (87)
                      ..++|.|+.+.|++...    ..+.++||..+.
T Consensus       173 ~~l~HgDl~~~Nil~~~----~~~~lID~e~a~  201 (301)
T 3dxq_A          173 LAACHCDPLCENFLDTG----ERMWIVDWEYSG  201 (301)
T ss_dssp             CEEECSCCCGGGEEECS----SCEEECCCTTCE
T ss_pred             ceeeccCCCcCCEEECC----CCEEEEeccccc
Confidence            45899999999999332    568999998765

>2qg7_A Ethanolamine kinase PV091845; malaria, SGC, structural genomics consortium, transferase; 2.41A {Plasmodium vivax}

Probab=85.06  E-value=0.55  Score=30.45  Aligned_cols=16  Identities=19%  Similarity=0.083  Sum_probs=14.4

Q ss_pred             CCceecCCCCCceEee
Q psy8010          35 HSLYRSCSQPQNLVLT   50 (87)
Q Consensus        35 ~~~~h~~~~~~~~l~~   50 (87)
                      ..++|.|+.+.|+++.
T Consensus       290 ~v~cHnDl~~gNIL~~  305 (458)
T 2qg7_A          290 IVLCHCDLLSSNIINT  305 (458)
T ss_dssp             EEEECSCCCGGGEEEC
T ss_pred             eeEEecCCCCCcEEee
Confidence            4688999999999998

>1zyl_A Hypothetical protein YIHE; putative protein kinase, structural genomics, PSI, protein structure initiative; 2.80A {Escherichia coli} SCOP: d.144.1.6

Probab=84.44  E-value=1.4  Score=26.53  Aligned_cols=29  Identities=14%  Similarity=0.146  Sum_probs=23.4

Q ss_pred             hCCceecCCCCCceEeeeCCCCCcEEEEeeccce
Q psy8010          34 THSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISR   67 (87)
Q Consensus        34 ~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~   67 (87)
                      ...++|.|+.+.|++++ +    .+.+.||+.+.
T Consensus       194 ~~~l~HgD~~~~Nil~~-~----~~~lIDfe~a~  222 (328)
T 1zyl_A          194 TVLRLHGDCHAGNILWR-D----GPMFVDLDDAR  222 (328)
T ss_dssp             CCEECCSSCSGGGEEES-S----SEEECCCTTCC
T ss_pred             CeeeeeCCCCcccEeEc-C----CCEEEECCCCC
Confidence            45688999999999997 2    57899997654

>1nw1_A Choline kinase (49.2 KD); phospholipid synthesis, protein kinase fold, transferase; 2.02A {Caenorhabditis elegans} SCOP: d.144.1.8

Probab=83.60  E-value=0.57  Score=29.95  Aligned_cols=18  Identities=17%  Similarity=0.183  Sum_probs=15.1

Q ss_pred             CCceecCCCCCceEeeeC
Q psy8010          35 HSLYRSCSQPQNLVLTGE   52 (87)
Q Consensus        35 ~~~~h~~~~~~~~l~~~~   52 (87)
                      ..++|.|+.+.|+++..+
T Consensus       249 ~v~~H~Dl~~gNiL~~~~  266 (429)
T 1nw1_A          249 VTFCHNDLQEGNILLPKA  266 (429)
T ss_dssp             EEEECSCCCGGGEEEEC-
T ss_pred             eEEEeCCCCCCeEEeeCC
Confidence            458899999999999873

>3g15_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics CONS SGC, hemicholinium-3, transferase; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*

Probab=83.13  E-value=0.68  Score=29.21  Aligned_cols=32  Identities=22%  Similarity=0.224  Sum_probs=24.2

Q ss_pred             CceecCCCCCceEeeeC---CCCCcEEEEeeccce
Q psy8010          36 SLYRSCSQPQNLVLTGE---YPDCDVKLCDFGISR   67 (87)
Q Consensus        36 ~~~h~~~~~~~~l~~~~---~~~~~~kl~dfg~~~   67 (87)
                      .++|.|+.+.|+++...   .+...+.++||..|.
T Consensus       245 vfcHnDl~~gNil~~~~~~~~~~~~l~vIDwEya~  279 (401)
T 3g15_A          245 VFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSS  279 (401)
T ss_dssp             EEECSCCCGGGEEEETTGGGCSSCCEEECCCTTCE
T ss_pred             eeEEecCCCCeEEEecCcccCcCCeEEEechHhcc
Confidence            36799999999998542   113569999998765

>3feg_A Choline/ethanolamine kinase; non-protein kinase, choline kinase, structural genomics CONS SGC, hemicholinium-3, phosphorylation; HET: HC7 ADP AMP; 1.30A {Homo sapiens} PDB: 3lq3_A* 2ig7_A*

Probab=80.55  E-value=1.1  Score=28.36  Aligned_cols=33  Identities=24%  Similarity=0.217  Sum_probs=25.0

Q ss_pred             CCceecCCCCCceEeeeC-CCCCcEEEEeeccce
Q psy8010          35 HSLYRSCSQPQNLVLTGE-YPDCDVKLCDFGISR   67 (87)
Q Consensus        35 ~~~~h~~~~~~~~l~~~~-~~~~~~kl~dfg~~~   67 (87)
                      ..++|.|+.+.|+++..+ ++...+.++||..+.
T Consensus       220 ~~~~H~D~~~~Nil~~~~~~~~~~~~~IDwE~a~  253 (379)
T 3feg_A          220 VVFCHNDIQEGNILLLSEPENADSLMLVDFEYSS  253 (379)
T ss_dssp             EEEECSCCCGGGEEEESCC---CCEEECCCTTCE
T ss_pred             cEEEcCCCCCCeEEEcCCCCccCcEEEEecccCC
Confidence            468899999999999864 112468999998765

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	87
d1t4ha_	270	d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sa	2e-05
d1a06a_	307	d.144.1.7 (A:) Calmodulin-dependent protein kinase	3e-05
d1tkia_	321	d.144.1.7 (A:) Titin, kinase domain {Human (Homo s	1e-04
d1koaa2	350	d.144.1.7 (A:5915-6264) Twitchin, kinase domain {C	3e-04
d2j4za1	263	d.144.1.7 (A:126-388) Aurora-related kinase 1 (aur	4e-04
d2jfla1	288	d.144.1.7 (A:21-308) STE20-like serine/threonine-p	4e-04
d1s9ja_	322	d.144.1.7 (A:) Dual specificity mitogen-activated	5e-04
d1u5ra_	309	d.144.1.7 (A:) Serine/threonine protein kinase TAO	5e-04
d3blha1	318	d.144.1.7 (A:8-325) Cell division protein kinase 9	6e-04
d2ozaa1	335	d.144.1.7 (A:51-385) MAP kinase activated protein	0.001
d2java1	269	d.144.1.7 (A:3-271) Serine/threonine-protein kinas	0.001
d1phka_	277	d.144.1.7 (A:) gamma-subunit of glycogen phosphory	0.002
d1uwha_	276	d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens)	0.002
d1jksa_	293	d.144.1.7 (A:) Death-associated protein kinase, Da	0.002
d1koba_	352	d.144.1.7 (A:) Twitchin, kinase domain {California	0.003
d3bqca1	328	d.144.1.7 (A:3-330) Protein kinase CK2, alpha subu	0.003

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 270

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.4 bits (89), Expect = 2e-05
 Identities = 10/43 (23%), Positives = 22/43 (51%), Gaps = 3/43 (6%)

Query: 43  QPQNLVLTGEYPDCDVKLCDFGISRHLSRDVDVREILGTPDYV 85
           +  N+ +TG      VK+ D G++         + ++GTP+++
Sbjct: 141 KCDNIFITGP--TGSVKIGDLGLATLKRASFA-KAVIGTPEFM 180

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 307

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 38.1 bits (88), Expect = 3e-05
 Identities = 16/73 (21%), Positives = 33/73 (45%), Gaps = 2/73 (2%)

Query: 13  PRLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRD 72
            R  +++   +L ++  +      ++R   +P+NL+      D  + + DFG+S+     
Sbjct: 106 ERDASRLIFQVLDAV-KYLHDLGIVHRDL-KPENLLYYSLDEDSKIMISDFGLSKMEDPG 163

Query: 73  VDVREILGTPDYV 85
             +    GTP YV
Sbjct: 164 SVLSTACGTPGYV 176

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]} Length = 321

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 36.2 bits (83), Expect = 1e-04
 Identities = 12/55 (21%), Positives = 26/55 (47%), Gaps = 1/55 (1%)

Query: 30  HFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDVDVREILGTPDY 84
            F  +H++     +P+N++         +K+ +FG +R L    + R +   P+Y
Sbjct: 116 QFLHSHNIGHFDIRPENIIYQTR-RSSTIKIIEFGQARQLKPGDNFRLLFTAPEY 169

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

 Score = 35.1 bits (80), Expect = 3e-04
 Identities = 13/55 (23%), Positives = 27/55 (49%), Gaps = 1/55 (1%)

Query: 30  HFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDVDVREILGTPDY 84
                ++      +P+N++ T +    ++KL DFG++ HL     V+   GT ++
Sbjct: 138 CHMHENNYVHLDLKPENIMFTTK-RSNELKLIDFGLTAHLDPKQSVKVTTGTAEF 191

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 34.9 bits (80), Expect = 4e-04
 Identities = 14/42 (33%), Positives = 21/42 (50%), Gaps = 4/42 (9%)

Query: 44  PQNLVLTGEYPDCDVKLCDFGISRHLSRDVDVREILGTPDYV 85
           P+NL+L       ++K+ DFG S H         + GT DY+
Sbjct: 134 PENLLLG---SAGELKIADFGWSVHAPSSRRTT-LCGTLDYL 171

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 35.0 bits (80), Expect = 4e-04
 Identities = 15/42 (35%), Positives = 23/42 (54%), Gaps = 4/42 (9%)

Query: 44  PQNLVLTGEYPDCDVKLCDFGISRHLSRDVDVR-EILGTPDY 84
             N++ T    D D+KL DFG+S   +R +  R   +GTP +
Sbjct: 138 AGNILFT---LDGDIKLADFGVSAKNTRTIQRRDSFIGTPYW 176

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 34.6 bits (79), Expect = 5e-04
 Identities = 17/73 (23%), Positives = 36/73 (49%), Gaps = 5/73 (6%)

Query: 13  PRLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRD 72
            +++ KV++ ++  L +       ++R    P N+++       ++KLCDFG+S  L   
Sbjct: 103 EQILGKVSIAVIKGLTYLREKHKIMHRDVK-PSNILVN---SRGEIKLCDFGVSGQLIDS 158

Query: 73  VDVREILGTPDYV 85
           +     +GT  Y+
Sbjct: 159 M-ANSFVGTRSYM 170

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 309

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 34.6 bits (79), Expect = 5e-04
 Identities = 11/42 (26%), Positives = 20/42 (47%), Gaps = 6/42 (14%)

Query: 44  PQNLVLTGEYPDCDVKLCDFGISRHLSRDVDVREILGTPDYV 85
             N++L+       VKL DFG +  ++        +GTP ++
Sbjct: 143 AGNILLS---EPGLVKLGDFGSASIMAPA---NSFVGTPYWM 178

>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]} Length = 318

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 9, CDK9
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 34.5 bits (78), Expect = 6e-04
 Identities = 14/62 (22%), Positives = 26/62 (41%), Gaps = 9/62 (14%)

Query: 29  HHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDVD-----VREILGTPD 83
           ++      L+R   +  N+++T    D  +KL DFG++R  S   +         + T  
Sbjct: 131 YYIHRNKILHRDM-KAANVLIT---RDGVLKLADFGLARAFSLAKNSQPNRYTNRVVTLW 186

Query: 84  YV 85
           Y 
Sbjct: 187 YR 188

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]} Length = 335

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 33.9 bits (77), Expect = 0.001
 Identities = 14/42 (33%), Positives = 23/42 (54%)

Query: 44  PQNLVLTGEYPDCDVKLCDFGISRHLSRDVDVREILGTPDYV 85
           P+NL+ T + P+  +KL DFG ++  +    +     TP YV
Sbjct: 139 PENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYV 180

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]} Length = 269

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 33.4 bits (76), Expect = 0.001
 Identities = 17/43 (39%), Positives = 25/43 (58%), Gaps = 4/43 (9%)

Query: 44  PQNLVLTGEYPDCDVKLCDFGISRHLSRDVDV-REILGTPDYV 85
           P N+ L G     +VKL DFG++R L+ D    +  +GTP Y+
Sbjct: 142 PANVFLDG---KQNVKLGDFGLARILNHDTSFAKAFVGTPYYM 181

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

 Score = 33.5 bits (76), Expect = 0.002
 Identities = 17/42 (40%), Positives = 25/42 (59%), Gaps = 3/42 (7%)

Query: 43  QPQNLVLTGEYPDCDVKLCDFGISRHLSRDVDVREILGTPDY 84
           +P+N++L     D ++KL DFG S  L     +RE+ GTP Y
Sbjct: 137 KPENILLDD---DMNIKLTDFGFSCQLDPGEKLREVCGTPSY 175

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 276

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 33.0 bits (75), Expect = 0.002
 Identities = 11/45 (24%), Positives = 20/45 (44%), Gaps = 6/45 (13%)

Query: 44  PQNLVLTGEYPDCDVKLCDFGISRHLSRDVDVRE---ILGTPDYV 85
             N+ L     D  VK+ DFG++   SR     +   + G+  ++
Sbjct: 132 SNNIFLH---EDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWM 173

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 32.8 bits (74), Expect = 0.002
 Identities = 12/57 (21%), Positives = 26/57 (45%)

Query: 29  HHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDVDVREILGTPDYV 85
           ++  S    +        ++L    P   +K+ DFG++  +    + + I GTP++V
Sbjct: 127 YYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFV 183

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]} Length = 352

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

 Score = 32.3 bits (73), Expect = 0.003
 Identities = 12/56 (21%), Positives = 26/56 (46%), Gaps = 2/56 (3%)

Query: 29  HHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDVDVREILGTPDY 84
            H      ++    +P+N++   +     VK+ DFG++  L+ D  V+    T ++
Sbjct: 141 KHMHEHSIVHLDI-KPENIMCETK-KASSVKIIDFGLATKLNPDEIVKVTTATAEF 194

>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]} Length = 328

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase CK2, alpha subunit
species: Rattus norvegicus [TaxId: 10116]

 Score = 32.5 bits (73), Expect = 0.003
 Identities = 6/41 (14%), Positives = 18/41 (43%), Gaps = 2/41 (4%)

Query: 44  PQNLVLTGEYPDCDVKLCDFGISRHLSRDVDVREILGTPDY 84
           P N+++  E     ++L D+G++       +    + +  +
Sbjct: 157 PHNVMIDHE--HRKLRLIDWGLAEFYHPGQEYNVRVASRYF 195

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	87
d1nvra_	271	Cell cycle checkpoint kinase chk1 {Human (Homo sap	99.81
d2ozaa1	335	MAP kinase activated protein kinase 2, mapkap2 {Hu	99.81
d1o6la_	337	Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9	99.81
d1koaa2	350	Twitchin, kinase domain {Caenorhabditis elegans, p	99.8
d1yhwa1	293	pak1 {Human (Homo sapiens) [TaxId: 9606]}	99.8
d1uwha_	276	B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}	99.8
d2jfla1	288	STE20-like serine/threonine-protein kinase, SLK {H	99.79
d1a06a_	307	Calmodulin-dependent protein kinase {Rat (Rattus n	99.79
d2j4za1	263	Aurora-related kinase 1 (aurora-2) {Human (Homo sa	99.79
d1u5ra_	309	Serine/threonine protein kinase TAO2 {Rat (Rattus	99.78
d1t4ha_	270	Protein kinase wnk1 {Human (Homo sapiens) [TaxId:	99.78
d1omwa3	364	G-protein coupled receptor kinase 2 {Cow (Bos taur	99.78
d1koba_	352	Twitchin, kinase domain {California sea hare (Aply	99.78
d1rdqe_	350	cAMP-dependent PK, catalytic subunit {Mouse (Mus m	99.77
d1uu3a_	288	3-phosphoinositide dependent protein kinase-1 Pdk1	99.77
d1ywna1	299	Vascular endothelial growth factor receptor 2 (kdr	99.77
d1fota_	316	cAMP-dependent PK, catalytic subunit {Baker's yeas	99.76
d1s9ja_	322	Dual specificity mitogen-activated protein kinase	99.76
d1ckia_	299	Casein kinase-1, CK1 {Rat (Rattus norvegicus) [Tax	99.76
d3bqca1	328	Protein kinase CK2, alpha subunit {Rattus norvegic	99.76
d1xwsa_	273	Proto-oncogene serine/threonine-protein kinase Pim	99.76
d1phka_	277	gamma-subunit of glycogen phosphorylase kinase (Ph	99.75
d1q5ka_	350	Glycogen synthase kinase-3 beta (Gsk3b) {Human (Ho	99.75
d1u59a_	285	Tyrosine-protein kinase ZAP-70 {Human (Homo sapien	99.75
d1rjba_	325	Fl cytokine receptor {Human (Homo sapiens) [TaxId:	99.75
d1csna_	293	Casein kinase-1, CK1 {Fission yeast (Schizosacchar	99.74
d1blxa_	305	Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [T	99.74
d1ua2a_	299	Cell division protein kinase 7, CDK7 {Human (Homo	99.74
d1jpaa_	299	ephb2 receptor tyrosine kinase {Mouse (Mus musculu	99.74
d2java1	269	Serine/threonine-protein kinase Nek2 {Human (Homo	99.74
d1mqba_	283	epha2 receptor tyrosine kinase {Human (Homo sapien	99.73
d1xbba_	277	Tyrosine-protein kinase SYK {Human (Homo sapiens)	99.73
d1jksa_	293	Death-associated protein kinase, Dap {Human (Homo	99.73
d1xkka_	317	EGF receptor tyrosine kinase, Erbb-1 {Human (Homo	99.73
d1sm2a_	263	Tyrosine-protein kinase Itk/Tsk {Human (Homo sapie	99.73
d1tkia_	321	Titin, kinase domain {Human (Homo sapiens) [TaxId:	99.73
d1xjda_	320	Protein kinase C, theta type {Human (Homo sapiens)	99.72
d1qpca_	272	Lymphocyte kinase (lck) {Human (Homo sapiens) [Tax	99.72
d1mp8a_	273	Focal adhesion kinase 1 (fak) {Human (Homo sapiens	99.71
d1opja_	287	Abelsone tyrosine kinase (abl) {Mouse (Mus musculu	99.71
d1gz8a_	298	Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [T	99.7
d1pmea_	345	MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606	99.7
d1u46a_	273	Activated CDC42 kinase 1, ACK1 {Human (Homo sapien	99.68
d1o6ya_	277	Mycobacterial protein kinase PknB, catalytic domai	99.68
d1cm8a_	346	MAP kinase p38-gamma {Human (Homo sapiens) [TaxId:	99.67
d1fmka3	285	c-src tyrosine kinase {Human (Homo sapiens) [TaxId	99.67
d3blha1	318	Cell division protein kinase 9, CDK9 {Human (Homo	99.67
d1k2pa_	258	Bruton's tyrosine kinase (Btk) {Human (Homo sapien	99.67
d1lufa_	301	Musk tyrosine kinase {Rat (Rattus norvegicus) [Tax	99.66
d1ob3a_	286	Cyclin-dependent PK, CDK2 {(Plasmodium falciparum)	99.66
d2b1pa1	355	c-jun N-terminal kinase (jnk3s) {Human (Homo sapie	99.63
d1vzoa_	322	Ribosomal protein S6 kinase alpha 5, Msk1 {Human (	99.63
d1fgka_	299	Fibroblast growth factor receptor 1 {Human (Homo s	99.62
d1fvra_	309	Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}	99.62
d1t46a_	311	c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]	99.61
d1p4oa_	308	Insulin-like growth factor 1 receptor {Human (Homo	99.61
d1r0pa_	311	Hepatocyte growth factor receptor, c-MET {Human (H	99.61
d1vjya_	303	Type I TGF-beta receptor R4 {Human (Homo sapiens)	99.6
d1unla_	292	Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [T	99.58
d2gfsa1	348	MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]	99.57
d1byga_	262	Carboxyl-terminal src kinase (csk) {Human (Homo sa	99.5
d1q8ya_	362	Sky1p {Baker's yeast (Saccharomyces cerevisiae) [T	99.46
d1zara2	191	Rio2 serine protein kinase C-terminal domain {Arch	99.35
d2ppqa1	316	Homoserine kinase ThrB {Agrobacterium tumefaciens	94.18
d1j7la_	263	Type IIIa 3',5"-aminoglycoside phosphotransferase	91.83
d1nd4a_	255	Aminoglycoside 3'-phosphotransferase IIa (Kanamyci	90.69
d2pula1	392	Methylthioribose kinase MtnK {Bacillus subtilis [T	90.33
d1zyla1	325	RdoA {Escherichia coli [TaxId: 562]}	86.79

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.81  E-value=1.3e-20  Score=112.79  Aligned_cols=72  Identities=19%  Similarity=0.352  Sum_probs=61.9

Q ss_pred             hcH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCc---ccccccccccccc
Q psy8010          11 RIP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDV---DVREILGTPDYVG   86 (87)
Q Consensus        11 ~~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~---~~~~~~gt~~y~a   86 (87)
                      .++ +++..++.|++.|+  .|+|++|++|||+||+|++++.+   ..+|++|||+|+.+....   .....+||+.|||
T Consensus        99 ~l~e~~~~~i~~qi~~al--~ylH~~~IiHrDiKp~NILl~~~---~~~KL~DFG~a~~~~~~~~~~~~~~~~GT~~Y~A  173 (271)
T d1nvra_          99 GMPEPDAQRFFHQLMAGV--VYLHGIGITHRDIKPENLLLDER---DNLKISDFGLATVFRYNNRERLLNKMCGTLPYVA  173 (271)
T ss_dssp             BCCHHHHHHHHHHHHHHH--HHHHHTTEECSCCCGGGEEECTT---CCEEECCCTTCEECEETTEECCBCCCCSCGGGSC
T ss_pred             CCCHHHHHHHHHHHHHHH--HHHHHcCCccCcccHHHEEECCC---CCEEEccchhheeeccCCccccccceeeCcCccC
Confidence            455 58899999999999  99999999999999999999875   689999999999764322   2356799999999


Q ss_pred             C
Q psy8010          87 E   87 (87)
Q Consensus        87 P   87 (87)
                      |
T Consensus       174 P  174 (271)
T d1nvra_         174 P  174 (271)
T ss_dssp             T
T ss_pred             H
Confidence            9

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.81  E-value=1.2e-20  Score=115.66  Aligned_cols=75  Identities=20%  Similarity=0.367  Sum_probs=67.0

Q ss_pred             hcH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCccccccccccccccC
Q psy8010          11 RIP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDVDVREILGTPDYVGE   87 (87)
Q Consensus        11 ~~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~~~~~~~gt~~y~aP   87 (87)
                      .++ +++..++.|++.|+  .|+|+++++|||+||+|++++..++...+|++|||+++...........+||+.||||
T Consensus       107 ~l~e~~~~~i~~qi~~al--~ylH~~~iiHRDiKp~NIll~~~~~~~~~Kl~DFG~a~~~~~~~~~~~~~gt~~y~aP  182 (335)
T d2ozaa1         107 AFTEREASEIMKSIGEAI--QYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAP  182 (335)
T ss_dssp             CEEHHHHHHHHHHHHHHH--HHHHHTTEECCCCSGGGEEESCSSTTCCEEECCCTTCEECCCCCCCCCCSCCCSSCCC
T ss_pred             CcCHHHHHHHHHHHHHHH--HHHHHcCCccccccccccccccccccccccccccceeeeccCCCccccccCCcccCCc
Confidence            466 58999999999999  9999999999999999999987654567999999999988776667778999999998

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.81  E-value=2.2e-20  Score=114.72  Aligned_cols=74  Identities=16%  Similarity=0.330  Sum_probs=64.0

Q ss_pred             hhhcH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCC-Ccccccccccccccc
Q psy8010           9 VARIP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSR-DVDVREILGTPDYVG   86 (87)
Q Consensus         9 ~~~~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~-~~~~~~~~gt~~y~a   86 (87)
                      .+.++ +.++.++.|++.|+  .|+|++|++|||+||+|++++.+   +.+|++|||+|+.... .......+||+.|||
T Consensus        99 ~~~~~e~~~~~~~~qil~al--~ylH~~~iiHRDlKP~NILl~~~---g~vkl~DFG~a~~~~~~~~~~~~~~GT~~Y~a  173 (337)
T d1o6la_          99 ERVFTEERARFYGAEIVSAL--EYLHSRDVVYRDIKLENLMLDKD---GHIKITDFGLCKEGISDGATMKTFCGTPEYLA  173 (337)
T ss_dssp             HSCCCHHHHHHHHHHHHHHH--HHHHHTTCBCCCCCGGGEEECTT---SCEEECCCTTCBCSCCTTCCBCCCEECGGGCC
T ss_pred             ccCCcHHHHHHHHHHHhhhh--hhhhhcCccccccCHHHeEecCC---CCEEEeecccccccccCCcccccceeCHHHhh
Confidence            34556 57999999999999  99999999999999999999885   7899999999987643 445567899999999


Q ss_pred             C
Q psy8010          87 E   87 (87)
Q Consensus        87 P   87 (87)
                      |
T Consensus       174 P  174 (337)
T d1o6la_         174 P  174 (337)
T ss_dssp             G
T ss_pred             h
Confidence            8

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

Probab=99.80  E-value=1.7e-20  Score=115.64  Aligned_cols=75  Identities=19%  Similarity=0.344  Sum_probs=65.5

Q ss_pred             hhcH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCccccccccccccccC
Q psy8010          10 ARIP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDVDVREILGTPDYVGE   87 (87)
Q Consensus        10 ~~~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~~~~~~~gt~~y~aP   87 (87)
                      ++++ +++..++.|++.|+  .|+|++|++|||+||+||++..+. +..+|++|||+++.+.......+.+||+.||||
T Consensus       119 ~~l~e~~~~~i~~qi~~aL--~ylH~~~iiHrDiKp~NIll~~~~-~~~vkL~DFG~a~~~~~~~~~~~~~gT~~Y~aP  194 (350)
T d1koaa2         119 NKMSEDEAVEYMRQVCKGL--CHMHENNYVHLDLKPENIMFTTKR-SNELKLIDFGLTAHLDPKQSVKVTTGTAEFAAP  194 (350)
T ss_dssp             SCBCHHHHHHHHHHHHHHH--HHHHHTTEECCCCCGGGEEESSTT-SCCEEECCCTTCEECCTTSCEEEECSCTTTCCH
T ss_pred             CCCCHHHHHHHHHHHHHHH--HHHHhcCCeeeeechhHeeeccCC-CCeEEEeecchheecccccccceecCcccccCH
Confidence            3466 58999999999999  999999999999999999997532 367999999999988766666778999999998

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.80  E-value=3.2e-20  Score=112.12  Aligned_cols=72  Identities=22%  Similarity=0.387  Sum_probs=62.9

Q ss_pred             hcH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCc-cccccccccccccC
Q psy8010          11 RIP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDV-DVREILGTPDYVGE   87 (87)
Q Consensus        11 ~~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~-~~~~~~gt~~y~aP   87 (87)
                      .++ +++..++.|++.|+  .|+|++|++|||+||+|++++.+   ..+|++|||+++.+.... .....+||+.||||
T Consensus       112 ~l~~~~~~~i~~qi~~aL--~yLH~~~iiHrDiKp~NILl~~~---~~vkl~DFG~a~~~~~~~~~~~~~~gt~~Y~aP  185 (293)
T d1yhwa1         112 CMDEGQIAAVCRECLQAL--EFLHSNQVIHRDIKSDNILLGMD---GSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAP  185 (293)
T ss_dssp             CCCHHHHHHHHHHHHHHH--HHHHHTTEECCCCSGGGEEECTT---CCEEECCCTTCEECCSTTCCBCCCCSCGGGCCH
T ss_pred             CCCHHHHHHHHHHHHHHH--HHHHHCCCcccCCcHHHeEECCC---CcEeeccchhheeeccccccccccccCCCccCh
Confidence            455 58999999999999  99999999999999999999875   789999999999875433 44567899999998

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.80  E-value=1.5e-20  Score=112.75  Aligned_cols=79  Identities=14%  Similarity=0.246  Sum_probs=61.0

Q ss_pred             HHHHHhhhcH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCc---cccccc
Q psy8010           4 FIITLVARIP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDV---DVREIL   79 (87)
Q Consensus         4 ~~~~~~~~~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~---~~~~~~   79 (87)
                      ++.....+++ ..+..++.|++.|+  .|+|+++++|||+||+|++++.+   ..+|++|||+|+......   ......
T Consensus        93 ~l~~~~~~~~~~~~~~i~~qi~~gl--~yLH~~~ivHrDlKp~NiLl~~~---~~~Kl~DFGla~~~~~~~~~~~~~~~~  167 (276)
T d1uwha_          93 HLHIIETKFEMIKLIDIARQTAQGM--DYLHAKSIIHRDLKSNNIFLHED---LTVKIGDFGLATVKSRWSGSHQFEQLS  167 (276)
T ss_dssp             HHHTSCCCCCHHHHHHHHHHHHHHH--HHHHHTTCCCSCCCGGGEEEETT---SSEEECCCCCSCC------------CC
T ss_pred             HHhhccCCCCHHHHHHHHHHHHHHH--HHHhcCCEeccccCHHHEEEcCC---CCEEEccccceeeccccCCcccccccc
Confidence            3443344566 57899999999999  99999999999999999999885   789999999998764322   234568


Q ss_pred             cccccccC
Q psy8010          80 GTPDYVGE   87 (87)
Q Consensus        80 gt~~y~aP   87 (87)
                      ||+.||||
T Consensus       168 gt~~y~AP  175 (276)
T d1uwha_         168 GSILWMAP  175 (276)
T ss_dssp             CCGGGCCH
T ss_pred             cCcccCCH
Confidence            99999998

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.79  E-value=1.2e-20  Score=113.70  Aligned_cols=79  Identities=22%  Similarity=0.391  Sum_probs=65.2

Q ss_pred             HHHHHhhhcH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCC-ccccccccc
Q psy8010           4 FIITLVARIP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRD-VDVREILGT   81 (87)
Q Consensus         4 ~~~~~~~~~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~-~~~~~~~gt   81 (87)
                      ++....+.++ +++..++.|++.|+  .|+|+++++|||+||+|++++.+   ..+|++|||+|...... ....+.+||
T Consensus        99 ~~~~~~~~l~e~~~~~i~~qi~~gL--~ylH~~~ivHrDiKp~NIll~~~---~~~Kl~DFG~a~~~~~~~~~~~~~~Gt  173 (288)
T d2jfla1          99 VMLELERPLTESQIQVVCKQTLDAL--NYLHDNKIIHRDLKAGNILFTLD---GDIKLADFGVSAKNTRTIQRRDSFIGT  173 (288)
T ss_dssp             HHHHHTSCCCHHHHHHHHHHHHHHH--HHHHHTTEECCCCSGGGEEECTT---SCEEECCCTTCEECHHHHHHHTCCCSC
T ss_pred             HHHhcCCCCCHHHHHHHHHHHHHHH--HHHHHCCEEEeecChhheeECCC---CCEEEEechhhhccCCCcccccccccc
Confidence            3444445567 58999999999999  99999999999999999999985   78999999999875332 223467999


Q ss_pred             cccccC
Q psy8010          82 PDYVGE   87 (87)
Q Consensus        82 ~~y~aP   87 (87)
                      +.||||
T Consensus       174 ~~y~AP  179 (288)
T d2jfla1         174 PYWMAP  179 (288)
T ss_dssp             CTTCCH
T ss_pred             cccCCH
Confidence            999998

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.79  E-value=1.9e-20  Score=113.70  Aligned_cols=75  Identities=20%  Similarity=0.348  Sum_probs=51.2

Q ss_pred             hcH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCccccccccccccccC
Q psy8010          11 RIP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDVDVREILGTPDYVGE   87 (87)
Q Consensus        11 ~~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~~~~~~~gt~~y~aP   87 (87)
                      .++ +++..++.|++.|+  .|+|+++++|||+||+|+++...+++..+|++|||+++.........+.+||+.||||
T Consensus       103 ~l~e~~~~~~~~qi~~al--~ylH~~~iiHrDiKp~Nil~~~~~~~~~vkl~DFG~a~~~~~~~~~~~~~GT~~y~AP  178 (307)
T d1a06a_         103 FYTERDASRLIFQVLDAV--KYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAP  178 (307)
T ss_dssp             CCCHHHHHHHHHHHHHHH--HHHHHTTCCCSCCCGGGEEESSSSTTCCEEECCC------------------CTTSCH
T ss_pred             CCCHHHHHHHHHHHHHHH--HhhhhceeeeEEecccceeecccCCCceEEEeccceeEEccCCCeeeeeeeCccccCc
Confidence            455 58999999999999  9999999999999999999976444578999999999877666666778999999998

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.79  E-value=6.8e-20  Score=109.22  Aligned_cols=72  Identities=24%  Similarity=0.407  Sum_probs=61.9

Q ss_pred             hhcH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCccccccccccccccC
Q psy8010          10 ARIP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDVDVREILGTPDYVGE   87 (87)
Q Consensus        10 ~~~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~~~~~~~gt~~y~aP   87 (87)
                      +.++ +++..++.|++.|+  .|+|+++++|||+||+|++++.+   ..+|++|||++...... .....+||+.||||
T Consensus       101 ~~l~e~~~~~i~~qi~~al--~~lH~~~ivHrDiKp~Nill~~~---~~~kl~DFG~a~~~~~~-~~~~~~Gt~~Y~AP  173 (263)
T d2j4za1         101 SKFDEQRTATYITELANAL--SYCHSKRVIHRDIKPENLLLGSA---GELKIADFGWSVHAPSS-RRTTLCGTLDYLPP  173 (263)
T ss_dssp             SSCCHHHHHHHHHHHHHHH--HHHHHTTCCCCCCCGGGEEECTT---SCEEECCCCSCSCCCCC-CCEETTEEGGGCCH
T ss_pred             CCCCHHHHHHHHHHHHHHH--HHHHHCCeeeeeeccccceecCC---CCEeecccceeeecCCC-cccccCCCCcccCH
Confidence            3455 58999999999999  99999999999999999999985   78999999999765433 34567899999998

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.78  E-value=1e-19  Score=110.55  Aligned_cols=71  Identities=24%  Similarity=0.356  Sum_probs=61.5

Q ss_pred             hhhcH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCccccccccccccccC
Q psy8010           9 VARIP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDVDVREILGTPDYVGE   87 (87)
Q Consensus         9 ~~~~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~~~~~~~gt~~y~aP   87 (87)
                      .+.++ .++..++.|++.|+  .|+|++|++|||+||+|++++.+   ..+|++|||++.....   ....+||+.||||
T Consensus       109 ~~~l~e~~~~~i~~qi~~aL--~yLH~~~iiHrDiKp~NILl~~~---~~~Kl~DFG~a~~~~~---~~~~~GT~~Y~AP  180 (309)
T d1u5ra_         109 KKPLQEVEIAAVTHGALQGL--AYLHSHNMIHRDVKAGNILLSEP---GLVKLGDFGSASIMAP---ANSFVGTPYWMAP  180 (309)
T ss_dssp             TSCCCHHHHHHHHHHHHHHH--HHHHHTTCBCCCCSGGGEEEETT---TEEEECCCTTCBSSSS---BCCCCSCGGGCCH
T ss_pred             CCCCCHHHHHHHHHHHHHHH--HHHHhCCEeccCCCcceEEECCC---CCEEEeecccccccCC---CCccccCccccCH
Confidence            34566 58999999999999  99999999999999999999985   7899999999986533   3456899999998

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.78  E-value=1.3e-19  Score=108.31  Aligned_cols=72  Identities=19%  Similarity=0.391  Sum_probs=60.5

Q ss_pred             hcH-HHHHHHHHHHHHHHHHHHhhhCC--ceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCccccccccccccccC
Q psy8010          11 RIP-RLVAKVTVTLLGSLNHHFTSTHS--LYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDVDVREILGTPDYVGE   87 (87)
Q Consensus        11 ~~~-~~~~~~~~q~~~~l~~~~~h~~~--~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~~~~~~~gt~~y~aP   87 (87)
                      .++ +.+..++.|++.|+  .|+|+++  ++|||+||+|++++.+  +..+|++|||+++... .......+||+.||||
T Consensus       108 ~~~~~~~~~~~~qi~~gl--~yLH~~~~~IiHrDiKp~NILl~~~--~~~~Kl~DFGla~~~~-~~~~~~~~GT~~Y~aP  182 (270)
T d1t4ha_         108 VMKIKVLRSWCRQILKGL--QFLHTRTPPIIHRDLKCDNIFITGP--TGSVKIGDLGLATLKR-ASFAKAVIGTPEFMAP  182 (270)
T ss_dssp             SCCHHHHHHHHHHHHHHH--HHHHTSSSCCCCSCCCGGGEEESST--TSCEEECCTTGGGGCC-TTSBEESCSSCCCCCG
T ss_pred             cccHHHHHHHHHHHHHHH--HHHHHCCCCEEeCCcChhhceeeCC--CCCEEEeecCcceecc-CCccCCcccCccccCH
Confidence            455 57899999999999  9999998  9999999999999754  3689999999997533 3344567999999998

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

Probab=99.78  E-value=1.9e-19  Score=111.38  Aligned_cols=71  Identities=15%  Similarity=0.268  Sum_probs=61.8

Q ss_pred             hcH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCccccccccccccccC
Q psy8010          11 RIP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDVDVREILGTPDYVGE   87 (87)
Q Consensus        11 ~~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~~~~~~~gt~~y~aP   87 (87)
                      .++ +.+..++.|++.|+  .|+|+++++|||+||+|++++..   +.+|++|||+|+.+... .....+||+.||||
T Consensus       103 ~~~e~~~~~~~~qi~~aL--~ylH~~~iiHrDlKP~NILl~~~---g~iKl~DFGla~~~~~~-~~~~~~GT~~y~AP  174 (364)
T d1omwa3         103 VFSEADMRFYAAEIILGL--EHMHNRFVVYRDLKPANILLDEH---GHVRISDLGLACDFSKK-KPHASVGTHGYMAP  174 (364)
T ss_dssp             SCCHHHHHHHHHHHHHHH--HHHHHTTEECCCCSGGGEEECSS---SCEEECCCTTCEECSSS-CCCSCCSCGGGCCH
T ss_pred             cccHHHHHHHHHHHHHHH--HHHHHCCccceeeccceeEEcCC---CcEEEeeeceeeecCCC-cccccccccccchh
Confidence            344 58999999999999  99999999999999999999885   78999999999877544 33456899999998

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

Probab=99.78  E-value=5.8e-20  Score=113.31  Aligned_cols=74  Identities=20%  Similarity=0.312  Sum_probs=65.1

Q ss_pred             hcH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCccccccccccccccC
Q psy8010          11 RIP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDVDVREILGTPDYVGE   87 (87)
Q Consensus        11 ~~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~~~~~~~gt~~y~aP   87 (87)
                      +++ +++..++.|++.|+  .|+|++|++|||+||+||+++... ...+|++|||+|..+..+.......||+.||||
T Consensus       123 ~l~e~~~~~i~~qi~~aL--~ylH~~~iiHRDiKp~NILl~~~~-~~~vkL~DFGla~~~~~~~~~~~~~gt~~y~aP  197 (352)
T d1koba_         123 KMSEAEVINYMRQACEGL--KHMHEHSIVHLDIKPENIMCETKK-ASSVKIIDFGLATKLNPDEIVKVTTATAEFAAP  197 (352)
T ss_dssp             CBCHHHHHHHHHHHHHHH--HHHHHTTEECCCCCGGGEEESSTT-CCCEEECCCTTCEECCTTSCEEEECSSGGGCCH
T ss_pred             CCCHHHHHHHHHHHHHHH--HHHHHCCeeecccccccccccccC-CCeEEEeecccceecCCCCceeeccCcccccCH
Confidence            466 58999999999999  999999999999999999997432 368999999999988777667778999999998

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.77  E-value=2.2e-19  Score=110.61  Aligned_cols=71  Identities=15%  Similarity=0.336  Sum_probs=62.0

Q ss_pred             hhcH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCccccccccccccccC
Q psy8010          10 ARIP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDVDVREILGTPDYVGE   87 (87)
Q Consensus        10 ~~~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~~~~~~~gt~~y~aP   87 (87)
                      +.++ +++..++.|++.|+  .|+|+++++|||+||+||+++.+   +.+|++|||+++.+...  ..+.+||+.||||
T Consensus       136 ~~l~e~~~~~i~~qi~~aL--~yLH~~~iiHRDIKP~NILl~~~---g~ikL~DFG~a~~~~~~--~~~~~Gt~~Y~AP  207 (350)
T d1rdqe_         136 GRFSEPHARFYAAQIVLTF--EYLHSLDLIYRDLKPENLLIDQQ---GYIQVTDFGFAKRVKGR--TWTLCGTPEALAP  207 (350)
T ss_dssp             CCCCHHHHHHHHHHHHHHH--HHHHHTTEECCCCSGGGEEECTT---SCEEECCCTTCEECSSC--BCCCEECGGGCCH
T ss_pred             CCCCHHHHHHHHHHHHHHH--HHHHhCCEecCcCCHHHcccCCC---CCEEeeeceeeeecccc--cccccCccccCCH
Confidence            3455 58999999999999  99999999999999999999875   78999999999986432  3457999999998

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.77  E-value=2.2e-19  Score=108.22  Aligned_cols=73  Identities=19%  Similarity=0.415  Sum_probs=59.9

Q ss_pred             hhcH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCc---cccccccccccc
Q psy8010          10 ARIP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDV---DVREILGTPDYV   85 (87)
Q Consensus        10 ~~~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~---~~~~~~gt~~y~   85 (87)
                      +.++ +.+..++.|++.|+  .|+|+++++|||+||+|++++.+   ..+|++|||+|+.+....   .....+||+.||
T Consensus       103 ~~l~e~~~~~~~~qi~~al--~ylH~~~iiHrDiKp~NIll~~~---~~vkl~DFG~a~~~~~~~~~~~~~~~~GT~~Y~  177 (288)
T d1uu3a_         103 GSFDETCTRFYTAEIVSAL--EYLHGKGIIHRDLKPENILLNED---MHIQITDFGTAKVLSPESKQARANSFVGTAQYV  177 (288)
T ss_dssp             SSCCHHHHHHHHHHHHHHH--HHHHHTTEECSCCSGGGEEECTT---SCEEECCCTTCEECC----------CCCCGGGC
T ss_pred             CCCCHHHHHHHHHHHHHHH--HhhccccEEcCcCCccccccCCC---ceEEecccccceecccCCcccccccccCCcccc
Confidence            4556 58999999999999  99999999999999999999885   789999999999874322   234578999999


Q ss_pred             cC
Q psy8010          86 GE   87 (87)
Q Consensus        86 aP   87 (87)
                      ||
T Consensus       178 AP  179 (288)
T d1uu3a_         178 SP  179 (288)
T ss_dssp             CH
T ss_pred             Cc
Confidence            98

>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Vascular endothelial growth factor receptor 2 (kdr)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.77  E-value=1.4e-19  Score=109.02  Aligned_cols=71  Identities=15%  Similarity=0.317  Sum_probs=55.2

Q ss_pred             cH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCc---cccccccccccccC
Q psy8010          12 IP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDV---DVREILGTPDYVGE   87 (87)
Q Consensus        12 ~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~---~~~~~~gt~~y~aP   87 (87)
                      ++ +++..++.|++.|+  .|+|+++++|||+||+|++++.+   ..+|++|||+|+......   ......||+.||||
T Consensus       131 l~~~~~~~~~~qi~~gl--~ylH~~~ivHrDlKp~NILl~~~---~~~Kl~DFGla~~~~~~~~~~~~~~~~gt~~y~AP  205 (299)
T d1ywna1         131 LTLEHLICYSFQVAKGM--EFLASRKCIHRDLAARNILLSEK---NVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAP  205 (299)
T ss_dssp             BCHHHHHHHHHHHHHHH--HHHHHTTCCCSCCCGGGEEECGG---GCEEECC------CCSCTTSCCTTSCCCGGGGCCH
T ss_pred             CCHHHHHHHHHHHHHHH--HHHHhCCCcCCcCCccceeECCC---CcEEEccCcchhhccccccccccCceeeCccccch
Confidence            44 57899999999999  99999999999999999999885   789999999998764332   22456899999998

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.76  E-value=3.4e-19  Score=108.48  Aligned_cols=67  Identities=19%  Similarity=0.403  Sum_probs=59.5

Q ss_pred             HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCccccccccccccccC
Q psy8010          14 RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDVDVREILGTPDYVGE   87 (87)
Q Consensus        14 ~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~~~~~~~gt~~y~aP   87 (87)
                      +.++.++.|++.|+  .|+|+++++|||+||+|++++.+   +.+|++|||+++.....  ..+.+||+.||||
T Consensus       104 ~~~~~~~~qi~~al--~~lH~~~iiHrDiKp~NILl~~~---g~vkL~DFG~a~~~~~~--~~~~~Gt~~Y~AP  170 (316)
T d1fota_         104 PVAKFYAAEVCLAL--EYLHSKDIIYRDLKPENILLDKN---GHIKITDFGFAKYVPDV--TYTLCGTPDYIAP  170 (316)
T ss_dssp             HHHHHHHHHHHHHH--HHHHTTTEECCCCCGGGEEECTT---SCEEECCCSSCEECSSC--BCCCCSCTTTCCH
T ss_pred             cHHHHHHHHHHHhh--hhhccCcEEccccCchheeEcCC---CCEEEecCccceEeccc--cccccCcccccCH
Confidence            57888999999999  99999999999999999999885   78999999999876433  3457999999998

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.76  E-value=6.7e-20  Score=111.70  Aligned_cols=72  Identities=28%  Similarity=0.637  Sum_probs=59.2

Q ss_pred             hhcH-HHHHHHHHHHHHHHHHHHhhh-CCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCccccccccccccccC
Q psy8010          10 ARIP-RLVAKVTVTLLGSLNHHFTST-HSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDVDVREILGTPDYVGE   87 (87)
Q Consensus        10 ~~~~-~~~~~~~~q~~~~l~~~~~h~-~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~~~~~~~gt~~y~aP   87 (87)
                      +.++ +.+..++.|++.|+  .|+|+ ++++|||+||+||+++.+   ..+|++|||+|+.+.+ ....+.+||++||||
T Consensus        99 ~~l~~~~~~~~~~qil~aL--~yLH~~~~IiHRDiKP~NILl~~~---~~vkl~DFGla~~~~~-~~~~~~~GT~~Y~AP  172 (322)
T d1s9ja_          99 GRIPEQILGKVSIAVIKGL--TYLREKHKIMHRDVKPSNILVNSR---GEIKLCDFGVSGQLID-SMANSFVGTRSYMSP  172 (322)
T ss_dssp             SSCCHHHHHHHHHHHHHHH--HHHHHHHCCCCSCCSGGGEEECTT---CCEEECCCCCCHHHHH-HTC---CCSSCCCCH
T ss_pred             CCCCHHHHHHHHHHHHHHH--HHHHHhCCEEccccCHHHeeECCC---CCEEEeeCCCccccCC-CccccccCCccccCc
Confidence            3456 57899999999999  99997 599999999999999885   7899999999986543 233567999999998

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.76  E-value=4.8e-19  Score=106.63  Aligned_cols=79  Identities=13%  Similarity=0.277  Sum_probs=64.1

Q ss_pred             HHhhhcH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCc--------cccc
Q psy8010           7 TLVARIP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDV--------DVRE   77 (87)
Q Consensus         7 ~~~~~~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~--------~~~~   77 (87)
                      ...+.++ +.+..++.|++.|+  .|+|+++++|||+||+|+++...+.+..++++|||+|+.+....        ....
T Consensus        95 ~~~~~~~~~~~~~~~~qi~~~l--~~lH~~~iiHrDiKp~NIl~~~~~~~~~vkl~DFG~a~~~~~~~~~~~~~~~~~~~  172 (299)
T d1ckia_          95 FCSRKFSLKTVLLLADQMISRI--EYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKN  172 (299)
T ss_dssp             HTTTCCCHHHHHHHHHHHHHHH--HHHHHTTEECSCCCGGGEEECCGGGTTCEEECCCSSCEECBCTTTCCBCCCCBCCS
T ss_pred             hccCCCcHHHHHHHHHHHHHHH--HHHHHCCeeeccCCHhhccccccCCCceeeeeccCcceeccccccccceeccccCC
Confidence            3344566 58999999999999  99999999999999999998765435679999999999874322        2245


Q ss_pred             cccccccccC
Q psy8010          78 ILGTPDYVGE   87 (87)
Q Consensus        78 ~~gt~~y~aP   87 (87)
                      ..||+.||||
T Consensus       173 ~~gt~~y~aP  182 (299)
T d1ckia_         173 LTGTARYASI  182 (299)
T ss_dssp             CCCCSSSCCH
T ss_pred             cCCCccccCH
Confidence            6899999998

>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase CK2, alpha subunit
species: Rattus norvegicus [TaxId: 10116]

Probab=99.76  E-value=2.6e-19  Score=108.97  Aligned_cols=75  Identities=12%  Similarity=0.265  Sum_probs=65.8

Q ss_pred             hhhcH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCccccccccccccccC
Q psy8010           9 VARIP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDVDVREILGTPDYVGE   87 (87)
Q Consensus         9 ~~~~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~~~~~~~gt~~y~aP   87 (87)
                      .++++ ++++.++.|++.||  .|+|++|++|||+||+||+++.+  +..++++|||++............+||+.|+||
T Consensus       123 ~~~l~e~~i~~i~~qil~aL--~~LH~~gIvHrDiKp~NILi~~~--~~~vkl~DFG~a~~~~~~~~~~~~~~t~~y~aP  198 (328)
T d3bqca1         123 YQTLTDYDIRFYMYEILKAL--DYCHSMGIMHRDVKPHNVMIDHE--HRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGP  198 (328)
T ss_dssp             TTSCCHHHHHHHHHHHHHHH--HHHHHTTEECCCCSGGGEEEETT--TTEEEECCGGGCEECCTTCCCCSCCSCGGGCCH
T ss_pred             hcCCCHHHHHHHHHHHHHHH--HHHhhcccccccccccceEEcCC--CCeeeecccccceeccCCCcccccccCccccCc
Confidence            44566 58999999999999  99999999999999999999875  356999999999988766667778999999998

>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Proto-oncogene serine/threonine-protein kinase Pim-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.76  E-value=1.1e-18  Score=104.23  Aligned_cols=73  Identities=16%  Similarity=0.223  Sum_probs=62.2

Q ss_pred             hhcH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCccccccccccccccC
Q psy8010          10 ARIP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDVDVREILGTPDYVGE   87 (87)
Q Consensus        10 ~~~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~~~~~~~gt~~y~aP   87 (87)
                      ..++ +++..++.|++.|+  .|+|+++++|||+||+|++++.+  ...+|++|||++..... ....+.+||+.||||
T Consensus       105 ~~l~e~~~~~~~~qi~~al--~~lH~~~iiHrDiKp~NIll~~~--~~~vkl~DFG~a~~~~~-~~~~~~~GT~~y~aP  178 (273)
T d1xwsa_         105 GALQEELARSFFWQVLEAV--RHCHNCGVLHRDIKDENILIDLN--RGELKLIDFGSGALLKD-TVYTDFDGTRVYSPP  178 (273)
T ss_dssp             CSCCHHHHHHHHHHHHHHH--HHHHHTTEECSCCSGGGEEEETT--TTEEEECCCTTCEECCS-SCBCCCCSCGGGSCH
T ss_pred             CCCCHHHHHHHHHHHHHHH--HHHHHCCCccccCcccceEEecC--CCeEEECccccceeccc-ccccccccCCCcCCH
Confidence            3455 58999999999999  99999999999999999999864  36899999999987543 334567999999998

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

Probab=99.75  E-value=9.6e-19  Score=104.85  Aligned_cols=74  Identities=26%  Similarity=0.466  Sum_probs=65.5

Q ss_pred             hhhcH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCccccccccccccccC
Q psy8010           9 VARIP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDVDVREILGTPDYVGE   87 (87)
Q Consensus         9 ~~~~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~~~~~~~gt~~y~aP   87 (87)
                      .+.++ +.++.++.|++.|+  .|+|+++++|+|++|+|++++.+   ..+|++|||+++.+..+......+||+.|+||
T Consensus       104 ~~~l~e~~~~~~~~qi~~al--~~lH~~~ivHrDlkp~Nill~~~---~~~kl~DFG~a~~~~~~~~~~~~~gt~~y~~P  178 (277)
T d1phka_         104 KVTLSEKETRKIMRALLEVI--CALHKLNIVHRDLKPENILLDDD---MNIKLTDFGFSCQLDPGEKLREVCGTPSYLAP  178 (277)
T ss_dssp             HSSCCHHHHHHHHHHHHHHH--HHHHHTTEECSCCSGGGEEECTT---CCEEECCCTTCEECCTTCCBCCCCSCGGGCCH
T ss_pred             cCCCCHHHHHHHHHHHHHHH--HHHHHcCCcccccccceEEEcCC---CCeEEccchheeEccCCCceeeeeccCCCCCH
Confidence            34556 68999999999999  99999999999999999999874   78999999999988766666778999999987

>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Glycogen synthase kinase-3 beta (Gsk3b)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.75  E-value=8.9e-19  Score=107.60  Aligned_cols=73  Identities=26%  Similarity=0.417  Sum_probs=64.4

Q ss_pred             hcH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCccccccccccccccC
Q psy8010          11 RIP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDVDVREILGTPDYVGE   87 (87)
Q Consensus        11 ~~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~~~~~~~gt~~y~aP   87 (87)
                      .++ ++++.++.|++.|+  .|+|++|++|||+||+||+++.+  ...+|++|||++..+.......+.+||+.|+||
T Consensus       118 ~l~~~~~~~i~~qil~aL--~yLH~~~IiHrDiKp~NILl~~~--~~~~kl~DFG~a~~~~~~~~~~~~~gt~~y~aP  191 (350)
T d1q5ka_         118 TLPVIYVKLYMYQLFRSL--AYIHSFGICHRDIKPQNLLLDPD--TAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAP  191 (350)
T ss_dssp             CCCHHHHHHHHHHHHHHH--HHHHTTTEECCCCCGGGEEECTT--TCCEEECCCTTCEECCTTSCCCSCCSCTTSCCH
T ss_pred             CCCHHHHHHHHHHHHHHH--HHHHhcCCcccCCCcceEEEecC--CCceeEecccchhhccCCcccccccccccccCh
Confidence            355 57999999999999  99999999999999999999875  257999999999988766666778999999987

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.75  E-value=6e-19  Score=106.11  Aligned_cols=75  Identities=17%  Similarity=0.216  Sum_probs=62.8

Q ss_pred             HhhhcH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCccc----ccccccc
Q psy8010           8 LVARIP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDVDV----REILGTP   82 (87)
Q Consensus         8 ~~~~~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~~~----~~~~gt~   82 (87)
                      ....++ ..+..++.|++.|+  .|+|+++++|||+||+|++++.+   ..+|++|||+++.+......    ....||+
T Consensus       102 ~~~~l~~~~~~~i~~qi~~gL--~ylH~~~iiHrDlKp~Nill~~~---~~~Kl~DFGla~~~~~~~~~~~~~~~~~gt~  176 (285)
T d1u59a_         102 KREEIPVSNVAELLHQVSMGM--KYLEEKNFVHRDLAARNVLLVNR---HYAKISDFGLSKALGADDSYYTARSAGKWPL  176 (285)
T ss_dssp             CTTTSCHHHHHHHHHHHHHHH--HHHHHTTEECCCCSGGGEEEEET---TEEEECCCTTCEECTTCSCEECCCCSSCCCG
T ss_pred             cccCCCHHHHHHHHHHHHHHH--HHHHhCCeecCcCchhheeeccC---CceeeccchhhhcccccccccccccccccCc
Confidence            334566 58899999999999  99999999999999999999985   78999999999987543322    3457899


Q ss_pred             ccccC
Q psy8010          83 DYVGE   87 (87)
Q Consensus        83 ~y~aP   87 (87)
                      .||||
T Consensus       177 ~y~aP  181 (285)
T d1u59a_         177 KWYAP  181 (285)
T ss_dssp             GGCCH
T ss_pred             cccCh
Confidence            99998

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.75  E-value=7.8e-19  Score=107.06  Aligned_cols=69  Identities=17%  Similarity=0.251  Sum_probs=59.6

Q ss_pred             HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCcc---ccccccccccccC
Q psy8010          14 RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDVD---VREILGTPDYVGE   87 (87)
Q Consensus        14 ~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~~---~~~~~gt~~y~aP   87 (87)
                      +.+..++.|++.|+  .|+|+++++|||+||+|++++.+   ..+|++|||+|+.......   .....||+.||||
T Consensus       164 ~~~~~i~~qi~~gl--~yLH~~~IiHRDlKp~Nill~~~---~~~Kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aP  235 (325)
T d1rjba_         164 EDLLCFAYQVAKGM--EFLEFKSCVHRDLAARNVLVTHG---KVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAP  235 (325)
T ss_dssp             HHHHHHHHHHHHHH--HHHHHTTEEETTCSGGGEEEETT---TEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCH
T ss_pred             HHHHHHHHHHHHHH--HHHHhCCeeeccCchhccccccC---CeEEEeeccccccccCCCceeeeccccCCCccCCh
Confidence            47889999999999  99999999999999999999885   7899999999987644332   2456889999998

>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

Probab=99.74  E-value=1.7e-18  Score=104.30  Aligned_cols=82  Identities=17%  Similarity=0.276  Sum_probs=64.0

Q ss_pred             HHHHHhhhcH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCC--CCCcEEEEeeccceecCCCc-------
Q psy8010           4 FIITLVARIP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEY--PDCDVKLCDFGISRHLSRDV-------   73 (87)
Q Consensus         4 ~~~~~~~~~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~--~~~~~kl~dfg~~~~~~~~~-------   73 (87)
                      ++......++ ..+..++.|++.++  .++|++|++|||+||+|++++...  ....++++|||+|+.+....       
T Consensus        90 ~~~~~~~~~~~~~~~~i~~q~~~~l--~~lH~~giiHrDiKp~Nili~~~~~~~~~~vkl~DFG~a~~~~~~~~~~~~~~  167 (293)
T d1csna_          90 LLDLCGRKFSVKTVAMAAKQMLARV--QSIHEKSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYRDPVTKQHIPY  167 (293)
T ss_dssp             HHHHTTTCCCHHHHHHHHHHHHHHH--HHHHTTTEECCCCCGGGEEECCSSSTTTTCEEECCCTTCEESBCTTTCCBCCC
T ss_pred             HHHhhccchhhHHHHHHHHHHHHHH--HHHHHCCceeccCCccceeecCcccccCCceEEcccceeEEcccCccccceee
Confidence            3333344566 57889999999999  999999999999999999997532  13579999999999764321       


Q ss_pred             -cccccccccccccC
Q psy8010          74 -DVREILGTPDYVGE   87 (87)
Q Consensus        74 -~~~~~~gt~~y~aP   87 (87)
                       .....+||+.||||
T Consensus       168 ~~~~~~~GT~~y~aP  182 (293)
T d1csna_         168 REKKNLSGTARYMSI  182 (293)
T ss_dssp             CCCCCCCSCTTTCCH
T ss_pred             cccCceEEchhhcCH
Confidence             22456899999998

>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.74  E-value=9.9e-19  Score=105.38  Aligned_cols=71  Identities=27%  Similarity=0.468  Sum_probs=63.2

Q ss_pred             cH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCccccccccccccccC
Q psy8010          12 IP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDVDVREILGTPDYVGE   87 (87)
Q Consensus        12 ~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~~~~~~~gt~~y~aP   87 (87)
                      ++ +.++.++.|++.|+  .|+|+++++|||+||+||+++..   ..+|++|||++............+||+.||||
T Consensus       113 ~~~~~~~~~~~qi~~aL--~yLH~~~ivHrDiKp~NILi~~~---~~~kl~dfg~~~~~~~~~~~~~~~gT~~Y~AP  184 (305)
T d1blxa_         113 VPTETIKDMMFQLLRGL--DFLHSHRVVHRDLKPQNILVTSS---GQIKLADFGLARIYSFQMALTSVVVTLWYRAP  184 (305)
T ss_dssp             SCHHHHHHHHHHHHHHH--HHHHHTTCCCCCCCGGGEEECTT---CCEEECSCCSCCCCCGGGGGCCCCCCCTTCCH
T ss_pred             CCHHHHHHHHHHHHHHH--HHHHhCCEEecCCCccEEEEcCC---CCeeecchhhhhhhcccccCCCcccChhhcCc
Confidence            44 57889999999999  99999999999999999999985   78999999998876656666778999999998

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.74  E-value=1.1e-18  Score=105.06  Aligned_cols=72  Identities=19%  Similarity=0.284  Sum_probs=61.9

Q ss_pred             hcH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCc-cccccccccccccC
Q psy8010          11 RIP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDV-DVREILGTPDYVGE   87 (87)
Q Consensus        11 ~~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~-~~~~~~gt~~y~aP   87 (87)
                      .++ +.+..++.|++.|+  .|+|++|++|||+||+||+++..   ..+|++|||+++...... .....+||+.||||
T Consensus        96 ~l~~~~~~~~~~qil~aL--~~lH~~~iiHrDiKp~NIli~~~---~~~KL~DFG~a~~~~~~~~~~~~~~gt~~y~aP  169 (299)
T d1ua2a_          96 VLTPSHIKAYMLMTLQGL--EYLHQHWILHRDLKPNNLLLDEN---GVLKLADFGLAKSFGSPNRAYTHQVVTRWYRAP  169 (299)
T ss_dssp             SCCSSHHHHHHHHHHHHH--HHHHHTTCCCCCCCGGGEEECTT---CCEEECCCGGGSTTTSCCCCCCCSCCCCTTCCH
T ss_pred             CCCHHHHHHHHHHHHHHH--HHhhccceecccCCcceEEecCC---CccccccCccccccCCCcccccceecChhhccH
Confidence            345 58999999999999  99999999999999999999875   789999999998764433 33567899999998

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.74  E-value=5.6e-19  Score=106.75  Aligned_cols=78  Identities=12%  Similarity=0.137  Sum_probs=52.9

Q ss_pred             HHHHhhhcH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCccc------cc
Q psy8010           5 IITLVARIP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDVDV------RE   77 (87)
Q Consensus         5 ~~~~~~~~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~~~------~~   77 (87)
                      +....+.++ .++..++.|++.|+  .|+|+++++|||+||+|++++.+   ..+|++|||+++.+......      ..
T Consensus       118 ~~~~~~~l~~~~~~~i~~qia~gl--~yLH~~~iiHrDlKp~NILl~~~---~~~Kl~DFGla~~~~~~~~~~~~~~~~~  192 (299)
T d1jpaa_         118 LRQNDGQFTVIQLVGMLRGIAAGM--KYLADMNYVHRDLAARNILVNSN---LVCKVSDFGLSRFLEDDTSDPTYTSALG  192 (299)
T ss_dssp             HHTTTTCSCHHHHHHHHHHHHHHH--HHHHHTTCCCSCCCGGGEEECTT---CCEEECCC--------------------
T ss_pred             eccccCCCCHHHHHHHHHHHHHHH--HHHhhCCCccCccccceEEECCC---CcEEECCcccceEccCCCCcceeeeccc
Confidence            333334566 57889999999999  99999999999999999999885   78999999999876433221      22


Q ss_pred             cccccccccC
Q psy8010          78 ILGTPDYVGE   87 (87)
Q Consensus        78 ~~gt~~y~aP   87 (87)
                      ..||+.||||
T Consensus       193 ~~~t~~y~aP  202 (299)
T d1jpaa_         193 GKIPIRWTAP  202 (299)
T ss_dssp             ---CGGGSCH
T ss_pred             ccCCccccCH
Confidence            4678999998

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.74  E-value=2.7e-19  Score=106.83  Aligned_cols=72  Identities=31%  Similarity=0.479  Sum_probs=51.6

Q ss_pred             hcH-HHHHHHHHHHHHHHHHHHhhhCC-----ceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCc-cccccccccc
Q psy8010          11 RIP-RLVAKVTVTLLGSLNHHFTSTHS-----LYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDV-DVREILGTPD   83 (87)
Q Consensus        11 ~~~-~~~~~~~~q~~~~l~~~~~h~~~-----~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~-~~~~~~gt~~   83 (87)
                      .++ +.+..++.|++.|+  .|+|+++     ++|||+||+|++++.+   ..+|++|||+++.+..+. .....+||+.
T Consensus       105 ~l~e~~~~~i~~qi~~al--~ylH~~~~~~~~IiHrDiKp~NIll~~~---~~vkl~DFG~a~~~~~~~~~~~~~~gt~~  179 (269)
T d2java1         105 YLDEEFVLRVMTQLTLAL--KECHRRSDGGHTVLHRDLKPANVFLDGK---QNVKLGDFGLARILNHDTSFAKAFVGTPY  179 (269)
T ss_dssp             CCCHHHHHHHHHHHHHHH--HHHHHHCC---------CCGGGEEECTT---SCEEECCHHHHHHC-----------CCCS
T ss_pred             CCCHHHHHHHHHHHHHHH--HHHHHhcCCCCCEEeCcCchhhcCcCCC---CcEEEeeccceeecccCCCccccCCCCcc
Confidence            455 58999999999999  9999976     9999999999999885   789999999998775443 3356799999


Q ss_pred             cccC
Q psy8010          84 YVGE   87 (87)
Q Consensus        84 y~aP   87 (87)
                      ||||
T Consensus       180 Y~AP  183 (269)
T d2java1         180 YMSP  183 (269)
T ss_dssp             CCCH
T ss_pred             cCCH
Confidence            9998

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.73  E-value=1.4e-18  Score=104.23  Aligned_cols=76  Identities=12%  Similarity=0.157  Sum_probs=55.8

Q ss_pred             HHhhhcH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCcc----ccccccc
Q psy8010           7 TLVARIP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDVD----VREILGT   81 (87)
Q Consensus         7 ~~~~~~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~~----~~~~~gt   81 (87)
                      .....++ .++..++.|++.|+  .|+|+++++|||+||+|++++.+   ..+|++|||+++.+.....    .....||
T Consensus       102 ~~~~~~~~~~~~~i~~~i~~gl--~~lH~~~iiHrDlKp~NILl~~~---~~~Kl~DFGla~~~~~~~~~~~~~~~~~gt  176 (283)
T d1mqba_         102 EKDGEFSVLQLVGMLRGIAAGM--KYLANMNYVHRDLAARNILVNSN---LVCKVSDFGLSRVLEDDPEATYTTSGGKIP  176 (283)
T ss_dssp             HTTTCSCHHHHHHHHHHHHHHH--HHHHHTTCCCSCCCGGGEEECTT---CCEEECCCCC-----------------CCC
T ss_pred             cccccccHHHHHHHHHHHHHhh--hhccccccccCccccceEEECCC---CeEEEcccchhhcccCCCccceEeccCCCC
Confidence            3334455 57889999999999  99999999999999999999985   7899999999987643321    2335789


Q ss_pred             cccccC
Q psy8010          82 PDYVGE   87 (87)
Q Consensus        82 ~~y~aP   87 (87)
                      +.||||
T Consensus       177 ~~Y~AP  182 (283)
T d1mqba_         177 IRWTAP  182 (283)
T ss_dssp             GGGSCH
T ss_pred             ccccCH
Confidence            999998

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.73  E-value=2.6e-18  Score=102.88  Aligned_cols=72  Identities=13%  Similarity=0.215  Sum_probs=59.9

Q ss_pred             hcH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCccc----cccccccccc
Q psy8010          11 RIP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDVDV----REILGTPDYV   85 (87)
Q Consensus        11 ~~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~~~----~~~~gt~~y~   85 (87)
                      .++ +.+..++.|++.|+  .|+|+++++|||+||+|++++.+   ..+|++|||+++.+......    ....||+.||
T Consensus       103 ~l~~~~~~~i~~qi~~gl--~ylH~~~iiHrDlKp~Nill~~~---~~~kl~DFGla~~~~~~~~~~~~~~~~~gt~~y~  177 (277)
T d1xbba_         103 HVKDKNIIELVHQVSMGM--KYLEESNFVHRDLAARNVLLVTQ---HYAKISDFGLSKALRADENYYKAQTHGKWPVKWY  177 (277)
T ss_dssp             TCCHHHHHHHHHHHHHHH--HHHHHTTEECSCCSGGGEEEEET---TEEEECCCTTCEECCTTCSEEEC----CCCGGGC
T ss_pred             CCCHHHHHHHHHHHHHHH--hhHHhCCcccCCCcchhhccccc---CcccccchhhhhhccccccccccccccCCCceec
Confidence            355 57899999999999  99999999999999999999985   78999999999976443322    3457899999


Q ss_pred             cC
Q psy8010          86 GE   87 (87)
Q Consensus        86 aP   87 (87)
                      ||
T Consensus       178 AP  179 (277)
T d1xbba_         178 AP  179 (277)
T ss_dssp             CH
T ss_pred             Cc
Confidence            98

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.73  E-value=3.6e-18  Score=102.74  Aligned_cols=76  Identities=17%  Similarity=0.391  Sum_probs=65.3

Q ss_pred             hhcH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCC-CCcEEEEeeccceecCCCccccccccccccccC
Q psy8010          10 ARIP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYP-DCDVKLCDFGISRHLSRDVDVREILGTPDYVGE   87 (87)
Q Consensus        10 ~~~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~-~~~~kl~dfg~~~~~~~~~~~~~~~gt~~y~aP   87 (87)
                      +.++ +.+..++.|++.|+  .|+|+++++|||+||+|+++...+. ...+|++|||++.....+.......||+.||||
T Consensus       108 ~~l~~~~~~~~~~qi~~al--~yLH~~~ivHrDiKp~Nill~~~~~~~~~vkl~DfG~a~~~~~~~~~~~~~~t~~y~AP  185 (293)
T d1jksa_         108 ESLTEEEATEFLKQILNGV--YYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAP  185 (293)
T ss_dssp             SSCCHHHHHHHHHHHHHHH--HHHHHTTEECCCCSGGGEEESCSSSSSCCEEECCCTTCEECTTSCBCSCCCCCGGGCCH
T ss_pred             cccchhHHHHHHHHHHHHH--HhhhhcceeecccccceEEEecCCCcccceEecchhhhhhcCCCccccccCCCCcccCH
Confidence            3455 58999999999999  9999999999999999999987532 235999999999988766666778999999998

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.73  E-value=9.7e-19  Score=106.28  Aligned_cols=78  Identities=13%  Similarity=0.187  Sum_probs=61.4

Q ss_pred             HHHHhhhcH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCccc---ccccc
Q psy8010           5 IITLVARIP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDVDV---REILG   80 (87)
Q Consensus         5 ~~~~~~~~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~~~---~~~~g   80 (87)
                      +......++ +.+..++.|++.|+  .|+|+++++|||+||+|++++.+   ..+|++|||+++.+......   ....|
T Consensus       101 ~~~~~~~~~~~~~~~i~~qi~~gl--~yLH~~~iiHrDlKp~NIll~~~---~~~kl~DFGla~~~~~~~~~~~~~~~~g  175 (317)
T d1xkka_         101 VREHKDNIGSQYLLNWCVQIAKGM--NYLEDRRLVHRDLAARNVLVKTP---QHVKITDFGLAKLLGAEEKEYHAEGGKV  175 (317)
T ss_dssp             HHHTSSSCCHHHHHHHHHHHHHHH--HHHHHTTCCCSCCCGGGEEEEET---TEEEECCCSHHHHTTTTCC--------C
T ss_pred             ccccccCCCHHHHHHHHHHHHHHH--HHHHHcCcccCcchhhcceeCCC---CCeEeeccccceeccccccccccccccc
Confidence            333344555 57899999999999  99999999999999999999985   78999999999876443322   34578


Q ss_pred             ccccccC
Q psy8010          81 TPDYVGE   87 (87)
Q Consensus        81 t~~y~aP   87 (87)
                      |+.||||
T Consensus       176 t~~y~AP  182 (317)
T d1xkka_         176 PIKWMAL  182 (317)
T ss_dssp             CTTTSCH
T ss_pred             CccccCh
Confidence            9999998

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.73  E-value=6.2e-19  Score=104.84  Aligned_cols=79  Identities=10%  Similarity=0.158  Sum_probs=54.2

Q ss_pred             HHHHHhhhcH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCccc--ccccc
Q psy8010           4 FIITLVARIP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDVDV--REILG   80 (87)
Q Consensus         4 ~~~~~~~~~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~~~--~~~~g   80 (87)
                      ++......++ +.+..++.|++.|+  .|+|+++++|||+||+|++++.+   ..+|++|||+++........  ....|
T Consensus        90 ~l~~~~~~~~~~~~~~i~~qia~gl--~~lH~~~iiHrDlKp~Nill~~~---~~~Kl~DFGla~~~~~~~~~~~~~~~g  164 (263)
T d1sm2a_          90 YLRTQRGLFAAETLLGMCLDVCEGM--AYLEEACVIHRDLAARNCLVGEN---QVIKVSDFGMTRFVLDDQYTSSTGTKF  164 (263)
T ss_dssp             HHHTTTTCCCHHHHHHHHHHHHHHH--HHHHHTTCCCTTCSGGGEEECGG---GCEEECSCC------------------
T ss_pred             HhhccccCCCHHHHHHHHHHHHHHH--HhhhccceeecccchhheeecCC---CCeEecccchheeccCCCceeecceec
Confidence            3333334455 57888999999999  99999999999999999999985   78999999999876443322  34688


Q ss_pred             ccccccC
Q psy8010          81 TPDYVGE   87 (87)
Q Consensus        81 t~~y~aP   87 (87)
                      |+.||||
T Consensus       165 t~~y~aP  171 (263)
T d1sm2a_         165 PVKWASP  171 (263)
T ss_dssp             CTTSCCH
T ss_pred             CcccCCh
Confidence            9999998

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.73  E-value=9.6e-19  Score=106.63  Aligned_cols=74  Identities=19%  Similarity=0.405  Sum_probs=64.2

Q ss_pred             hcH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCccccccccccccccC
Q psy8010          11 RIP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDVDVREILGTPDYVGE   87 (87)
Q Consensus        11 ~~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~~~~~~~gt~~y~aP   87 (87)
                      +++ +++..++.|++.|+  .|+|++|++|||+||+|++++.++ ...++++|||+++............||+.|+||
T Consensus        98 ~l~e~~~~~i~~qi~~al--~yLH~~~iiHrDlKp~NIll~~~~-~~~ikl~DFG~~~~~~~~~~~~~~~~t~~y~ap  172 (321)
T d1tkia_          98 ELNEREIVSYVHQVCEAL--QFLHSHNIGHFDIRPENIIYQTRR-SSTIKIIEFGQARQLKPGDNFRLLFTAPEYYAP  172 (321)
T ss_dssp             CCCHHHHHHHHHHHHHHH--HHHHHTTEECCCCCGGGEEESSSS-CCCEEECCCTTCEECCTTCEEEEEESCGGGSCH
T ss_pred             CCCHHHHHHHHHHHHHHH--HHHHHcCCCcccccccceeecCCC-ceEEEEcccchhhccccCCcccccccccccccc
Confidence            456 58999999999999  999999999999999999997642 357999999999987666666777999999987

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.72  E-value=4.2e-18  Score=103.78  Aligned_cols=73  Identities=19%  Similarity=0.379  Sum_probs=62.5

Q ss_pred             hhcH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCC-CccccccccccccccC
Q psy8010          10 ARIP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSR-DVDVREILGTPDYVGE   87 (87)
Q Consensus        10 ~~~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~-~~~~~~~~gt~~y~aP   87 (87)
                      .+++ +++..++.|++.|+  .|+|+++++|||+||+|++++..   ..+|++|||+++.... .......+||+.|+||
T Consensus        98 ~~~~e~~~~~~~~qi~~al--~ylH~~~iiHrDikp~NiL~~~~---~~~kl~DFG~a~~~~~~~~~~~~~~gt~~y~aP  172 (320)
T d1xjda_          98 HKFDLSRATFYAAEIILGL--QFLHSKGIVYRDLKLDNILLDKD---GHIKIADFGMCKENMLGDAKTNTFCGTPDYIAP  172 (320)
T ss_dssp             SSCCHHHHHHHHHHHHHHH--HHHHHTTCBCCCCCGGGEEECTT---SCEEECCCTTCBCCCCTTCCBCCCCSCGGGCCH
T ss_pred             CCCCHHHHHHHHHHHHHHH--HHHHhCCeeeccCcccceeecCC---CceeccccchhhhcccccccccccCCCCCcCCH
Confidence            3455 58999999999999  99999999999999999999975   7899999999987643 3334557999999998

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.72  E-value=3.6e-18  Score=101.94  Aligned_cols=71  Identities=10%  Similarity=0.216  Sum_probs=61.1

Q ss_pred             cH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCcc--ccccccccccccC
Q psy8010          12 IP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDVD--VREILGTPDYVGE   87 (87)
Q Consensus        12 ~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~~--~~~~~gt~~y~aP   87 (87)
                      ++ +++..++.|++.|+  .|+|+++++|||+||+|++++.+   ..+|++|||+|+.+.....  .....||+.||||
T Consensus       106 l~~~~~~~i~~qi~~gl--~~lH~~~ivHrDiKp~NIll~~~---~~~Kl~DFGla~~~~~~~~~~~~~~~gt~~y~AP  179 (272)
T d1qpca_         106 LTINKLLDMAAQIAEGM--AFIEERNYIHRDLRAANILVSDT---LSCKIADFGLARLIEDNEYTAREGAKFPIKWTAP  179 (272)
T ss_dssp             CCHHHHHHHHHHHHHHH--HHHHHTTEECSCCSGGGEEECTT---SCEEECCCTTCEECSSSCEECCTTCCCCTTTSCH
T ss_pred             CCHHHHHHHHHHHHHHH--HHHHhCCcccCccchhheeeecc---cceeeccccceEEccCCccccccccCCcccccCh
Confidence            45 57889999999999  99999999999999999999985   7899999999998754432  2446889999998

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.71  E-value=4e-18  Score=101.66  Aligned_cols=78  Identities=14%  Similarity=0.163  Sum_probs=53.4

Q ss_pred             HHHHhhhcH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCc--cccccccc
Q psy8010           5 IITLVARIP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDV--DVREILGT   81 (87)
Q Consensus         5 ~~~~~~~~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~--~~~~~~gt   81 (87)
                      +......++ +.+..++.|++.|+  .|+|+++++|||+||+|++++..   ..+|++|||+++.+....  ......||
T Consensus        98 ~~~~~~~l~~~~~~~~~~qi~~gl--~ylH~~~iiHrDlKp~NIll~~~---~~~Kl~DfG~a~~~~~~~~~~~~~~~gt  172 (273)
T d1mp8a_          98 LQVRKYSLDLASLILYAYQLSTAL--AYLESKRFVHRDIAARNVLVSSN---DCVKLGDFGLSRYMEDSTYYKASKGKLP  172 (273)
T ss_dssp             HHHTTTTSCHHHHHHHHHHHHHHH--HHHHHTTCCCSCCSGGGEEEEET---TEEEECC-------------------CC
T ss_pred             hhccCCCCCHHHHHHHHHHHHHHh--hhhcccCeeccccchhheeecCC---CcEEEccchhheeccCCcceeccceecC
Confidence            344444566 58899999999999  99999999999999999999985   789999999998764332  22456789


Q ss_pred             cccccC
Q psy8010          82 PDYVGE   87 (87)
Q Consensus        82 ~~y~aP   87 (87)
                      +.|+||
T Consensus       173 ~~y~ap  178 (273)
T d1mp8a_         173 IKWMAP  178 (273)
T ss_dssp             GGGCCH
T ss_pred             cccchh
Confidence            999997

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.71  E-value=3e-18  Score=103.04  Aligned_cols=72  Identities=13%  Similarity=0.214  Sum_probs=60.1

Q ss_pred             hcH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCccc--cccccccccccC
Q psy8010          11 RIP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDVDV--REILGTPDYVGE   87 (87)
Q Consensus        11 ~~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~~~--~~~~gt~~y~aP   87 (87)
                      .++ +.+..++.|++.|+  .|+|+++++|||+||+|++++.+   ..+|++|||+++....+...  ....|++.||||
T Consensus       111 ~~~~~~~~~i~~qi~~gL--~yLH~~~iiHrDlKp~NILl~~~---~~~Kl~DFG~a~~~~~~~~~~~~~~~g~~~y~aP  185 (287)
T d1opja_         111 EVSAVVLLYMATQISSAM--EYLEKKNFIHRDLAARNCLVGEN---HLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAP  185 (287)
T ss_dssp             TSCHHHHHHHHHHHHHHH--HHHHHTTCCCSCCSGGGEEECGG---GCEEECCCCCTTTCCSSSSEEETTEEECGGGCCH
T ss_pred             chHHHHHHHHHHHHHHHH--HHHHHCCcccCccccCeEEECCC---CcEEEccccceeecCCCCceeeccccccccccCh
Confidence            344 47889999999999  99999999999999999999885   78999999999876443322  345688999998

>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.70  E-value=3.6e-18  Score=102.90  Aligned_cols=72  Identities=29%  Similarity=0.410  Sum_probs=62.1

Q ss_pred             hcH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCC-CccccccccccccccC
Q psy8010          11 RIP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSR-DVDVREILGTPDYVGE   87 (87)
Q Consensus        11 ~~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~-~~~~~~~~gt~~y~aP   87 (87)
                      .++ +++..++.|++.|+  .|+|+++++|||+||+||+++.+   ..+|++|||+++.... ........||+.|+||
T Consensus        98 ~l~e~~~~~~~~qil~~L--~yLH~~~IiHrDiKpeNIl~~~~---~~~kl~DFG~a~~~~~~~~~~~~~~gt~~y~ap  171 (298)
T d1gz8a_          98 GIPLPLIKSYLFQLLQGL--AFCHSHRVLHRDLKPQNLLINTE---GAIKLADFGLARAFGVPVRTYTHEVVTLWYRAP  171 (298)
T ss_dssp             CCCHHHHHHHHHHHHHHH--HHHHHTTCCCSCCCGGGEEECTT---SCEEECSTTHHHHHCCCSBCTTCCBCCCTTCCH
T ss_pred             CCCHHHHHHHHHHHHHHH--HHhhcCCEEccccCchheeeccc---CcceeccCCcceeccCCcccceeecccceeeeh
Confidence            456 58999999999999  99999999999999999999875   7899999999987643 3344567899999987

>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase Erk2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.70  E-value=1.1e-17  Score=102.54  Aligned_cols=73  Identities=25%  Similarity=0.468  Sum_probs=62.0

Q ss_pred             hhcH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCc----ccccccccccc
Q psy8010          10 ARIP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDV----DVREILGTPDY   84 (87)
Q Consensus        10 ~~~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~----~~~~~~gt~~y   84 (87)
                      .+++ +.++.++.|++.|+  .|+|++|++|||+||+||+++.+   ..+|++|||++.......    .....+||+.|
T Consensus       104 ~~l~~~~i~~i~~qil~al--~yLH~~~iiHRDIKp~NILl~~~---~~~kl~DfG~a~~~~~~~~~~~~~~~~~gt~~y  178 (345)
T d1pmea_         104 QHLSNDHICYFLYQILRGL--KYIHSANVLHRDLKPSNLLLNTT---CDLKICDFGLARVADPDHDHTGFLTEYVATRWY  178 (345)
T ss_dssp             CCCCHHHHHHHHHHHHHHH--HHHHHTTEECCCCCGGGEEECTT---CCEEECCCTTCEECCGGGCBCCTTCCCCSCGGG
T ss_pred             CCCCHHHHHHHHHHHHHHH--HHHHHCCCcCCCCCcceEEECCC---CCEEEcccCceeeccCCCccceeecccccccee
Confidence            3566 58999999999999  99999999999999999999875   789999999998764332    23556899999


Q ss_pred             ccC
Q psy8010          85 VGE   87 (87)
Q Consensus        85 ~aP   87 (87)
                      +||
T Consensus       179 ~aP  181 (345)
T d1pmea_         179 RAP  181 (345)
T ss_dssp             CCG
T ss_pred             chH
Confidence            998

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.68  E-value=3.7e-17  Score=97.65  Aligned_cols=78  Identities=15%  Similarity=0.204  Sum_probs=60.9

Q ss_pred             HHHHhhhcH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCcc----ccccc
Q psy8010           5 IITLVARIP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDVD----VREIL   79 (87)
Q Consensus         5 ~~~~~~~~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~~----~~~~~   79 (87)
                      +....+.++ ..+..++.|++.|+  .|+|+++++|+|+||+|++++.+   ..+|++|||+++.+.....    .....
T Consensus       101 ~~~~~~~l~~~~~~~~~~qi~~gl--~ylH~~~iiHrDikp~NIll~~~---~~vkl~DfGl~~~~~~~~~~~~~~~~~~  175 (273)
T d1u46a_         101 LRKHQGHFLLGTLSRYAVQVAEGM--GYLESKRFIHRDLAARNLLLATR---DLVKIGDFGLMRALPQNDDHYVMQEHRK  175 (273)
T ss_dssp             HHHHGGGSCHHHHHHHHHHHHHHH--HHHHHTTEECSCCCGGGEEEEET---TEEEECCCTTCEECCC-CCEEEC-----
T ss_pred             hhcccCCCCHHHHHHHHHHHHHHH--HHhhhCCEeeeeecHHHhccccc---cceeeccchhhhhcccCCCcceecCccc
Confidence            334444566 57889999999999  99999999999999999999985   7899999999998744332    23457


Q ss_pred             cccccccC
Q psy8010          80 GTPDYVGE   87 (87)
Q Consensus        80 gt~~y~aP   87 (87)
                      |++.|+||
T Consensus       176 ~~~~~~aP  183 (273)
T d1u46a_         176 VPFAWCAP  183 (273)
T ss_dssp             CCGGGCCH
T ss_pred             cCcccCCH
Confidence            78889987

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=99.68  E-value=2.4e-17  Score=98.33  Aligned_cols=73  Identities=21%  Similarity=0.449  Sum_probs=54.3

Q ss_pred             hhcH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCc----ccccccccccc
Q psy8010          10 ARIP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDV----DVREILGTPDY   84 (87)
Q Consensus        10 ~~~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~----~~~~~~gt~~y   84 (87)
                      +.++ +++..++.|++.|+  .|+|++|++|||+||+|++++.+   ...+++|||.+.......    .....+||+.|
T Consensus       106 ~~l~~~~~~~i~~qi~~al--~~lH~~~iiHrDiKP~NIll~~~---~~~~l~d~~~~~~~~~~~~~~~~~~~~~Gt~~Y  180 (277)
T d1o6ya_         106 GPMTPKRAIEVIADACQAL--NFSHQNGIIHRDVKPANIMISAT---NAVKVMDFGIARAIADSGNSVTQTAAVIGTAQY  180 (277)
T ss_dssp             CSCCHHHHHHHHHHHHHHH--HHHHHTTEECCCCSGGGEEEETT---SCEEECCCTTCEECC----------------TT
T ss_pred             CCCCHHHHHHHHHHHHHHH--HHHHhCCccCccccCcccccCcc---ccceeehhhhhhhhccccccccccccccCcccc
Confidence            3455 58999999999999  99999999999999999999985   789999999887653222    33567899999


Q ss_pred             ccC
Q psy8010          85 VGE   87 (87)
Q Consensus        85 ~aP   87 (87)
                      |||
T Consensus       181 ~aP  183 (277)
T d1o6ya_         181 LSP  183 (277)
T ss_dssp             CCH
T ss_pred             cCH
Confidence            998

>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38-gamma
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.67  E-value=3.9e-17  Score=99.92  Aligned_cols=71  Identities=18%  Similarity=0.402  Sum_probs=62.0

Q ss_pred             hhcH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCccccccccccccccC
Q psy8010          10 ARIP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDVDVREILGTPDYVGE   87 (87)
Q Consensus        10 ~~~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~~~~~~~gt~~y~aP   87 (87)
                      .+++ +.++.++.|++.|+  .|+|++|++|||+||+||+++.+   ..+|++|||+++....  .....+||+.|+||
T Consensus       116 ~~l~~~~~~~~~~qi~~aL--~~LH~~~IiHrDiKp~NIL~~~~---~~~kl~Dfg~a~~~~~--~~~~~~~t~~y~aP  187 (346)
T d1cm8a_         116 EKLGEDRIQFLVYQMLKGL--RYIHAAGIIHRDLKPGNLAVNED---CELKILDFGLARQADS--EMTGYVVTRWYRAP  187 (346)
T ss_dssp             CCCCHHHHHHHHHHHHHHH--HHHHHTTEECCCCCGGGEEECTT---CCEEECCCTTCEECCS--SCCSSCSCGGGCCT
T ss_pred             ccccHHHHHHHHHHHHHHH--HHHHhCCCcccccCcchhhcccc---cccccccccceeccCC--ccccccccccccCH
Confidence            3566 58999999999999  99999999999999999999985   7899999999987643  34567899999998

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.67  E-value=1.7e-17  Score=99.77  Aligned_cols=72  Identities=8%  Similarity=0.176  Sum_probs=55.5

Q ss_pred             hcH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCc--cccccccccccccC
Q psy8010          11 RIP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDV--DVREILGTPDYVGE   87 (87)
Q Consensus        11 ~~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~--~~~~~~gt~~y~aP   87 (87)
                      .++ +++..++.|++.|+  .|+|+.+++|+|+||+|++++.+   ..+|++|||+++.+....  ......||+.|+||
T Consensus       109 ~l~~~~~~~i~~~i~~gl--~~LH~~~ivH~DlKp~NIll~~~---~~~kl~DfGla~~~~~~~~~~~~~~~gt~~y~aP  183 (285)
T d1fmka3         109 YLRLPQLVDMAAQIASGM--AYVERMNYVHRDLRAANILVGEN---LVCKVADFGLARLIEDNEYTARQGAKFPIKWTAP  183 (285)
T ss_dssp             TCCHHHHHHHHHHHHHHH--HHHHHTTCCCSCCSGGGEEECGG---GCEEECCCCTTC--------------CCGGGSCH
T ss_pred             cchHHHHHHHHHHHHHHH--HHHhhhheecccccceEEEECCC---CcEEEcccchhhhccCCCceeeccccccccccCh
Confidence            455 58899999999999  99999999999999999999885   789999999998764333  22346889999998

>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 9, CDK9
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.67  E-value=2.3e-17  Score=99.88  Aligned_cols=72  Identities=21%  Similarity=0.290  Sum_probs=60.1

Q ss_pred             hcH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCc-----ccccccccccc
Q psy8010          11 RIP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDV-----DVREILGTPDY   84 (87)
Q Consensus        11 ~~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~-----~~~~~~gt~~y   84 (87)
                      .++ +.++.++.|++.|+  .|+|++|++|||+||+||+++.+   ..+|++|||++..+....     .....+||+.|
T Consensus       113 ~~~~~~~~~i~~qil~~l--~~lH~~~ivHrDlKp~NILl~~~---~~~kl~dfg~~~~~~~~~~~~~~~~~~~~gT~~Y  187 (318)
T d3blha1         113 KFTLSEIKRVMQMLLNGL--YYIHRNKILHRDMKAANVLITRD---GVLKLADFGLARAFSLAKNSQPNRYTNRVVTLWY  187 (318)
T ss_dssp             CCCHHHHHHHHHHHHHHH--HHHHHTTEECCCCCGGGEEECTT---SCEEECCCTTCEECCC-----CCCCCSCCSCGGG
T ss_pred             ccccHHHHHHHHHHHHHH--HHhccCCEEecCcCchheeecCC---CcEEeeecceeeecccccccccccccceecCHHH
Confidence            344 57899999999999  99999999999999999999985   789999999998764322     22456899999


Q ss_pred             ccC
Q psy8010          85 VGE   87 (87)
Q Consensus        85 ~aP   87 (87)
                      +||
T Consensus       188 ~aP  190 (318)
T d3blha1         188 RPP  190 (318)
T ss_dssp             CCH
T ss_pred             hhH
Confidence            997

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.67  E-value=3.7e-17  Score=97.01  Aligned_cols=74  Identities=14%  Similarity=0.167  Sum_probs=61.5

Q ss_pred             hhhcH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCccc--cccccccccc
Q psy8010           9 VARIP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDVDV--REILGTPDYV   85 (87)
Q Consensus         9 ~~~~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~~~--~~~~gt~~y~   85 (87)
                      ...++ ..+..++.|++.|+  .|+|+++++|+|++|+|++++.+   ..+|++|||+++.+......  ....||+.|+
T Consensus        94 ~~~~~~~~~~~i~~qi~~gl--~~LH~~~iiH~dlk~~Nill~~~---~~~kl~DfG~a~~~~~~~~~~~~~~~~t~~y~  168 (258)
T d1k2pa_          94 RHRFQTQQLLEMCKDVCEAM--EYLESKQFLHRDLAARNCLVNDQ---GVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWS  168 (258)
T ss_dssp             GGCCCHHHHHHHHHHHHHHH--HHHHHTTBCCSCCSGGGEEECTT---CCEEECCCSSCCBCSSSSCCCCCCSCCCGGGC
T ss_pred             ccCCcHHHHHHHHHHHHHHH--HHHhhcCcccccccceeEEEcCC---CcEEECcchhheeccCCCceeecccCCCCCcC
Confidence            33444 47889999999999  99999999999999999999875   78999999999876443322  3468899999


Q ss_pred             cC
Q psy8010          86 GE   87 (87)
Q Consensus        86 aP   87 (87)
                      ||
T Consensus       169 aP  170 (258)
T d1k2pa_         169 PP  170 (258)
T ss_dssp             CH
T ss_pred             Cc
Confidence            98

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.66  E-value=2.3e-17  Score=99.50  Aligned_cols=69  Identities=13%  Similarity=0.128  Sum_probs=57.6

Q ss_pred             HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCc---cccccccccccccC
Q psy8010          14 RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDV---DVREILGTPDYVGE   87 (87)
Q Consensus        14 ~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~---~~~~~~gt~~y~aP   87 (87)
                      ..+..++.|++.|+  .|+|+++++|+|+||+||+++.+   ..+|++|||+++.+.+..   ......|++.|+||
T Consensus       140 ~~~~~i~~qi~~gl--~ylH~~~ivHrDlKp~NILld~~---~~~Kl~DFGls~~~~~~~~~~~~~~~~~~~~y~aP  211 (301)
T d1lufa_         140 AEQLCIARQVAAGM--AYLSERKFVHRDLATRNCLVGEN---MVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPP  211 (301)
T ss_dssp             HHHHHHHHHHHHHH--HHHHHTTCCCSCCSGGGEEECGG---GCEEECCCSCHHHHTGGGCBC----CCBCGGGCCH
T ss_pred             HHHHHHHHHHHHHh--hhcccCCeEeeEEcccceEECCC---CcEEEccchhheeccCCccccccCCCCcCcCcCCH
Confidence            46899999999999  99999999999999999999985   789999999998664332   22356889999997

>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: (Plasmodium falciparum) [TaxId: 5833]

Probab=99.66  E-value=2e-17  Score=98.95  Aligned_cols=74  Identities=20%  Similarity=0.325  Sum_probs=58.3

Q ss_pred             hhhcH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCc-ccccccccccccc
Q psy8010           9 VARIP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDV-DVREILGTPDYVG   86 (87)
Q Consensus         9 ~~~~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~-~~~~~~gt~~y~a   86 (87)
                      .+.++ +.+..++.|++.|+  .|+|+++++|||+||+||+++.+   ..+|++|||.+....... ......|++.|+|
T Consensus        94 ~~~l~~~~~~~i~~qi~~~L--~~LH~~~IvHrDiKp~NIll~~~---~~~kl~DfG~a~~~~~~~~~~~~~~~~~~y~~  168 (286)
T d1ob3a_          94 EGGLESVTAKSFLLQLLNGI--AYCHDRRVLHRDLKPQNLLINRE---GELKIADFGLARAFGIPVRKYTHEIVTLWYRA  168 (286)
T ss_dssp             TTCCCHHHHHHHHHHHHHHH--HHHHHTTCCCSCCCGGGEEECTT---SCEEECCTTHHHHHCC---------CCCTTCC
T ss_pred             cCCcchhhhHHHHHHHHHHH--HHhccCcEEecCCCCceeeEcCC---CCEEecccccceecccCccccceecccchhhh
Confidence            34556 58999999999999  99999999999999999999885   789999999998764333 2345578999988


Q ss_pred             C
Q psy8010          87 E   87 (87)
Q Consensus        87 P   87 (87)
                      |
T Consensus       169 p  169 (286)
T d1ob3a_         169 P  169 (286)
T ss_dssp             H
T ss_pred             H
Confidence            6

>d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-jun N-terminal kinase (jnk3s)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.63  E-value=1.4e-16  Score=97.92  Aligned_cols=78  Identities=15%  Similarity=0.310  Sum_probs=56.0

Q ss_pred             HHHHhhhcH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCccccccccccc
Q psy8010           5 IITLVARIP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDVDVREILGTPD   83 (87)
Q Consensus         5 ~~~~~~~~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~~~~~~~gt~~   83 (87)
                      .......++ +.++.++.|++.|+  .|+|++|++|+|+||+|+++..+   ..++++|||+++...........+||+.
T Consensus       109 ~~~~~~~~~~~~i~~~~~qil~gl--~~LH~~giiHrDlKP~Nil~~~~---~~~kl~df~~~~~~~~~~~~~~~~~t~~  183 (355)
T d2b1pa1         109 CQVIQMELDHERMSYLLYQMLCGI--KHLHSAGIIHRDLKPSNIVVKSD---CTLKILDFGLARTAGTSFMMTPYVVTRY  183 (355)
T ss_dssp             HHHHTSCCCHHHHHHHHHHHHHHH--HHHHHTTCCCSCCCGGGEEECTT---CCEEECCCCC---------------CCT
T ss_pred             HHhhhcCCCHHHHHHHHHHHHHHH--HHhhhcccccccCCccccccccc---cceeeechhhhhcccccccccccccccc
Confidence            344455666 58999999999999  99999999999999999999985   7899999999887766666677799999


Q ss_pred             cccC
Q psy8010          84 YVGE   87 (87)
Q Consensus        84 y~aP   87 (87)
                      |+||
T Consensus       184 y~aP  187 (355)
T d2b1pa1         184 YRAP  187 (355)
T ss_dssp             TCCH
T ss_pred             ccCh
Confidence            9998

>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Ribosomal protein S6 kinase alpha 5, Msk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.63  E-value=2.3e-16  Score=96.01  Aligned_cols=69  Identities=20%  Similarity=0.286  Sum_probs=59.7

Q ss_pred             HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCc--cccccccccccccC
Q psy8010          14 RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDV--DVREILGTPDYVGE   87 (87)
Q Consensus        14 ~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~--~~~~~~gt~~y~aP   87 (87)
                      +.+..++.|++.|+  .|+|+++++|||+||+|++++.+   ..++++|||+++.+....  ...+..|++.|+||
T Consensus       129 ~~~~~~~~Qi~~al--~~lH~~~ivHrDiKp~Nill~~~---~~vkL~DFG~a~~~~~~~~~~~~~~~g~~~~~~p  199 (322)
T d1vzoa_         129 HEVQIYVGEIVLAL--EHLHKLGIIYRDIKLENILLDSN---GHVVLTDFGLSKEFVADETERAYDFCGTIEYMAP  199 (322)
T ss_dssp             HHHHHHHHHHHHHH--HHHHHTTCCCCCCCGGGEEECTT---SCEEESCSSEEEECCGGGGGGGCGGGSCCTTCCH
T ss_pred             HHHHHHHHHHHHHH--HHhhcCCEEeccCCccceeecCC---CCEEEeeccchhhhcccccccccccccccccchh
Confidence            67889999999999  99999999999999999999985   789999999998764332  23567899999886

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.62  E-value=1.3e-16  Score=96.08  Aligned_cols=72  Identities=10%  Similarity=0.211  Sum_probs=61.0

Q ss_pred             hcH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCc---ccccccccccccc
Q psy8010          11 RIP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDV---DVREILGTPDYVG   86 (87)
Q Consensus        11 ~~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~---~~~~~~gt~~y~a   86 (87)
                      +++ ..+..++.|++.|+  .|+|+++++|||+||+|++++.+   ..+|++|||+++......   ......|++.|+|
T Consensus       131 ~l~~~~~~~~~~qi~~al--~ylH~~~ivHrDiKp~NiLl~~~---~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~a  205 (299)
T d1fgka_         131 QLSSKDLVSCAYQVARGM--EYLASKKCIHRDLAARNVLVTED---NVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMA  205 (299)
T ss_dssp             CCCHHHHHHHHHHHHHHH--HHHHHTTCCCSCCSGGGEEECTT---CCEEECSTTCCCCGGGCCTTCCCTTSCCGGGGSC
T ss_pred             cCCHHHHHHHHHHHHHHH--HHhhhCCEEeeeecccceeecCC---CCeEeccchhhccccccccccccccCCCChhhhh
Confidence            355 57899999999999  99999999999999999999985   789999999998764332   2345688999999


Q ss_pred             C
Q psy8010          87 E   87 (87)
Q Consensus        87 P   87 (87)
                      |
T Consensus       206 P  206 (299)
T d1fgka_         206 P  206 (299)
T ss_dssp             H
T ss_pred             h
Confidence            7

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.62  E-value=1.2e-16  Score=96.68  Aligned_cols=71  Identities=13%  Similarity=0.172  Sum_probs=58.5

Q ss_pred             cH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCccccccccccccccC
Q psy8010          12 IP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDVDVREILGTPDYVGE   87 (87)
Q Consensus        12 ~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~~~~~~~gt~~y~aP   87 (87)
                      ++ ..+..++.|++.|+  .|+|+++++|+|+||.|++++.+   ..+|++|||+++............||+.|+||
T Consensus       124 l~~~~~~~~~~qia~gl--~~lH~~~iiHrDlkp~NIL~~~~---~~~kl~DfG~a~~~~~~~~~~~~~gt~~y~aP  195 (309)
T d1fvra_         124 LSSQQLLHFAADVARGM--DYLSQKQFIHRDLAARNILVGEN---YVAKIADFGLSRGQEVYVKKTMGRLPVRWMAI  195 (309)
T ss_dssp             SCHHHHHHHHHHHHHHH--HHHHHTTEECSCCSGGGEEECGG---GCEEECCTTCEESSCEECCC----CCTTTCCH
T ss_pred             CCHHHHHHHHHHHHHHH--HhhhcCCccccccccceEEEcCC---CceEEccccccccccccccccceecCCcccch
Confidence            44 47899999999999  99999999999999999999985   78999999999866544444566889999987

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.61  E-value=3.7e-16  Score=94.60  Aligned_cols=69  Identities=16%  Similarity=0.293  Sum_probs=59.5

Q ss_pred             HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCccc---cccccccccccC
Q psy8010          14 RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDVDV---REILGTPDYVGE   87 (87)
Q Consensus        14 ~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~~~---~~~~gt~~y~aP   87 (87)
                      ..+..++.|++.|+  .|+|+++++|||+||+|++++..   ..++++|||+++........   ...+||+.|+||
T Consensus       145 ~~~~~~~~qi~~gl--~~LH~~~ivHrDLKp~NIl~~~~---~~~ki~DfG~~~~~~~~~~~~~~~~~~gt~~y~aP  216 (311)
T d1t46a_         145 EDLLSFSYQVAKGM--AFLASKNCIHRDLAARNILLTHG---RITKICDFGLARDIKNDSNYVVKGNARLPVKWMAP  216 (311)
T ss_dssp             HHHHHHHHHHHHHH--HHHHHTTCCCSCCSGGGEEEETT---TEEEECCCGGGSCTTSCTTSEECSSSEECGGGCCH
T ss_pred             HHHHHHHHHHHHHH--HHHHhCCeeeccccccccccccc---CcccccccchheeccCCCcceEeeecccChHHcCH
Confidence            47889999999999  99999999999999999999885   78999999999876443322   346889999997

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.61  E-value=2.6e-16  Score=95.20  Aligned_cols=69  Identities=12%  Similarity=0.198  Sum_probs=58.8

Q ss_pred             HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCcc---ccccccccccccC
Q psy8010          14 RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDVD---VREILGTPDYVGE   87 (87)
Q Consensus        14 ~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~~---~~~~~gt~~y~aP   87 (87)
                      ..+..++.|++.|+  .|+|+++++|+|+||.|++++.+   ..+|++|||+++.+.....   .....||+.|+||
T Consensus       133 ~~~~~i~~~ia~gl--~~LH~~~ivHrDlk~~NiLld~~---~~~Kl~DFGla~~~~~~~~~~~~~~~~~t~~y~aP  204 (308)
T d1p4oa_         133 SKMIQMAGEIADGM--AYLNANKFVHRDLAARNCMVAED---FTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSP  204 (308)
T ss_dssp             HHHHHHHHHHHHHH--HHHHHTTCBCSCCSGGGEEECTT---CCEEECCTTCCCGGGGGGCEEGGGSSEECGGGCCH
T ss_pred             HHHHHHHHHHHHHH--HHHhhCCeeeceEcCCceeecCC---ceEEEeecccceeccCCcceeeccceecccccCCH
Confidence            46788999999999  99999999999999999999874   7899999999987643332   2445789999997

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.61  E-value=2.3e-16  Score=95.65  Aligned_cols=69  Identities=13%  Similarity=0.189  Sum_probs=58.3

Q ss_pred             HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCccc-----cccccccccccC
Q psy8010          14 RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDVDV-----REILGTPDYVGE   87 (87)
Q Consensus        14 ~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~~~-----~~~~gt~~y~aP   87 (87)
                      ..+..++.|++.|+  .|+|+.+++|+|+||.|++++.+   ..+|++|||+++........     ....||+.|+||
T Consensus       130 ~~~~~i~~qia~gL--~~lH~~~iiHrDLK~~NILl~~~---~~~kL~DFG~~~~~~~~~~~~~~~~~~~~gt~~y~aP  203 (311)
T d1r0pa_         130 KDLIGFGLQVAKGM--KFLASKKFVHRDLAARNCMLDEK---FTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMAL  203 (311)
T ss_dssp             HHHHHHHHHHHHHH--HHHHHTTCCCSCCSGGGEEECTT---CCEEECSSGGGCCTTTTTCCCTTCTTCSSCCGGGSCH
T ss_pred             HHHHHHHHHHHHhh--hhhcccCcccCCccHHhEeECCC---CCEEEecccchhhccccccccceecccccccccccCh
Confidence            46789999999999  99999999999999999999874   78999999999876433221     235789999987

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.60  E-value=3.9e-16  Score=94.24  Aligned_cols=69  Identities=12%  Similarity=0.206  Sum_probs=56.7

Q ss_pred             HHHHHHHHHHHHHHHHHHhhh--------CCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCc-----ccccccc
Q psy8010          14 RLVAKVTVTLLGSLNHHFTST--------HSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDV-----DVREILG   80 (87)
Q Consensus        14 ~~~~~~~~q~~~~l~~~~~h~--------~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~-----~~~~~~g   80 (87)
                      +....++.|++.++  .|+|+        ++++|+|+||+|++++.+   ..+|++|||+++......     .....+|
T Consensus       100 ~~~~~~~~~ia~gl--~~lH~~~~~~~~~~~IvHrDlKp~NILl~~~---~~~Kl~DFGl~~~~~~~~~~~~~~~~~~~g  174 (303)
T d1vjya_         100 EGMIKLALSTASGL--AHLHMEIVGTQGKPAIAHRDLKSKNILVKKN---GTCCIADLGLAVRHDSATDTIDIAPNHRVG  174 (303)
T ss_dssp             HHHHHHHHHHHHHH--HHHHCCBCSTTCBCEEECSCCCGGGEEECTT---SCEEECCCTTCEEEETTTTEECC----CCS
T ss_pred             HHHHHHHHHHHHHH--HHHHHhhhhhccCCCeeccccCccceEEcCC---CCeEEEecCccccccCCCcceeccccceec
Confidence            56788999999999  99996        599999999999999875   789999999998764332     1235689


Q ss_pred             ccccccC
Q psy8010          81 TPDYVGE   87 (87)
Q Consensus        81 t~~y~aP   87 (87)
                      |+.||||
T Consensus       175 t~~y~aP  181 (303)
T d1vjya_         175 TKRYMAP  181 (303)
T ss_dssp             CGGGCCH
T ss_pred             ccCcCCh
Confidence            9999998

>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK5
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.58  E-value=2.9e-15  Score=89.37  Aligned_cols=76  Identities=22%  Similarity=0.337  Sum_probs=60.9

Q ss_pred             HHhhhcH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCccc-ccccccccc
Q psy8010           7 TLVARIP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDVDV-REILGTPDY   84 (87)
Q Consensus         7 ~~~~~~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~~~-~~~~gt~~y   84 (87)
                      ...+.++ ..+..++.|++.|+  .|+|+++++|||+||+|+++...   ..+|++|||.++........ ....++++|
T Consensus        93 ~~~~~~~~~~~~~~~~q~~~aL--~~lH~~~IvHrDiKP~NIli~~~---~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~  167 (292)
T d1unla_          93 SCNGDLDPEIVKSFLFQLLKGL--GFCHSRNVLHRDLKPQNLLINRN---GELKLANFGLARAFGIPVRCYSAEVVTLWY  167 (292)
T ss_dssp             HTTTCCCHHHHHHHHHHHHHHH--HHHHHTTEECCCCSGGGEEECTT---CCEEECCCTTCEECCSCCSCCCSCCSCGGG
T ss_pred             ccccccchhHHHHHHHHHHHHH--HHhhcCCEeeecccCcccccccC---CceeeeecchhhcccCCCccceeeccccch
Confidence            3344555 57899999999999  99999999999999999999985   68999999999987544433 344566767


Q ss_pred             ccC
Q psy8010          85 VGE   87 (87)
Q Consensus        85 ~aP   87 (87)
                      +||
T Consensus       168 ~~p  170 (292)
T d1unla_         168 RPP  170 (292)
T ss_dssp             CCH
T ss_pred             hhh
Confidence            665

>d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.57  E-value=6.2e-16  Score=94.40  Aligned_cols=71  Identities=21%  Similarity=0.447  Sum_probs=57.1

Q ss_pred             hhcH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCccccccccccccccC
Q psy8010          10 ARIP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDVDVREILGTPDYVGE   87 (87)
Q Consensus        10 ~~~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~~~~~~~gt~~y~aP   87 (87)
                      ++++ +.++.++.|++.|+  .|+|++|++|||+||+|++++.+   +.++++|||++....  ....+..||+.|+||
T Consensus       116 ~~l~e~~~~~i~~qil~aL--~~LH~~giiHrDiKp~NILi~~~---~~~kl~dfg~a~~~~--~~~~~~~g~~~y~ap  187 (348)
T d2gfsa1         116 QKLTDDHVQFLIYQILRGL--KYIHSADIIHRDLKPSNLAVNED---CELKILDFGLARHTD--DEMTGYVATRWYRAP  187 (348)
T ss_dssp             CCCCHHHHHHHHHHHHHHH--HHHHHTTCCCCCCCGGGEEECTT---CCEEECCC----CCT--GGGSSSCHHHHTSCH
T ss_pred             ccccHHHHHHHHHHHHHHH--HHHHhCCCcccccCCcccccccc---ccccccccchhcccC--cccccccccccccCc
Confidence            3466 58999999999999  99999999999999999999885   789999999987542  334566889999987

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.50  E-value=1.1e-14  Score=86.47  Aligned_cols=69  Identities=10%  Similarity=0.208  Sum_probs=52.6

Q ss_pred             cH-HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecCCCccccccccccccccC
Q psy8010          12 IP-RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLSRDVDVREILGTPDYVGE   87 (87)
Q Consensus        12 ~~-~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~~~~~~~~~~gt~~y~aP   87 (87)
                      ++ +.+..++.|++.|+  .|+|+.+++|+|++|.|++++.+   ..++++|||+++.....  .....+++.|+||
T Consensus       100 l~~~~~~~i~~~i~~al--~ylH~~~ivH~dlkp~Nil~~~~---~~~kl~dfg~s~~~~~~--~~~~~~~~~y~aP  169 (262)
T d1byga_         100 LGGDCLLKFSLDVCEAM--EYLEGNNFVHRDLAARNVLVSED---NVAKVSDFGLTKEASST--QDTGKLPVKWTAP  169 (262)
T ss_dssp             CCHHHHHHHHHHHHHHH--HHHHHTTCCCSCCSGGGEEECTT---SCEEECCCCC--------------CCTTTSCH
T ss_pred             CCHHHHHHHHHHHHhhc--cccccCceeccccchHhheecCC---CCEeecccccceecCCC--CccccccccCCCh
Confidence            55 57899999999999  99999999999999999999985   78999999999865332  3345788899998

>d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Sky1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.46  E-value=3.7e-14  Score=86.61  Aligned_cols=70  Identities=16%  Similarity=0.269  Sum_probs=57.5

Q ss_pred             HHHHHHHHHHHHHHHHHHhhh-CCceecCCCCCceEeeeCCCC---CcEEEEeeccceecCCCccccccccccccccC
Q psy8010          14 RLVAKVTVTLLGSLNHHFTST-HSLYRSCSQPQNLVLTGEYPD---CDVKLCDFGISRHLSRDVDVREILGTPDYVGE   87 (87)
Q Consensus        14 ~~~~~~~~q~~~~l~~~~~h~-~~~~h~~~~~~~~l~~~~~~~---~~~kl~dfg~~~~~~~~~~~~~~~gt~~y~aP   87 (87)
                      +.++.++.|++.|+  .++|+ .|++|||+||+|++++..+..   ..++++|||.+.....  .....+||+.|+||
T Consensus       125 ~~i~~i~~qil~al--~~lh~~~~IvHrDlKp~NIll~~~~~~~~~~~~kl~dfg~s~~~~~--~~~~~~gt~~y~aP  198 (362)
T d1q8ya_         125 IYVKQISKQLLLGL--DYMHRRCGIIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWYDE--HYTNSIQTREYRSP  198 (362)
T ss_dssp             HHHHHHHHHHHHHH--HHHHHTTCEECSCCSGGGEEEEEEETTTTEEEEEECCCTTCEETTB--CCCSCCSCGGGCCH
T ss_pred             HHHHHHHHHHHHHH--HHHhhhcCcccccCChhHeeeeccCcccccceeeEeeccccccccc--ccccccccccccCh
Confidence            57899999999999  99997 899999999999999865211   2489999999886533  23456899999997

>d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: RIO1-like kinases
domain: Rio2 serine protein kinase C-terminal domain
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=99.35  E-value=1e-12  Score=74.33  Aligned_cols=51  Identities=12%  Similarity=0.072  Sum_probs=45.3

Q ss_pred             HHHHHHHHHHHHHHHHHHhhhCCceecCCCCCceEeeeCCCCCcEEEEeeccceecC
Q psy8010          14 RLVAKVTVTLLGSLNHHFTSTHSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRHLS   70 (87)
Q Consensus        14 ~~~~~~~~q~~~~l~~~~~h~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~~~   70 (87)
                      +.+..++.|++.++  .++|++|++|+|+||+|++++.    ..++++|||.+....
T Consensus       103 ~~~~~i~~ql~~~l--~~lH~~giiHrDiKP~NILv~~----~~~~liDFG~a~~~~  153 (191)
T d1zara2         103 ENPDEVLDMILEEV--AKFYHRGIVHGDLSQYNVLVSE----EGIWIIDFPQSVEVG  153 (191)
T ss_dssp             SCHHHHHHHHHHHH--HHHHHTTEECSCCSTTSEEEET----TEEEECCCTTCEETT
T ss_pred             HHHHHHHHHHHHHH--HHHhhCCEEEccCChhheeeeC----CCEEEEECCCcccCC
Confidence            35678899999999  9999999999999999999986    468999999998754

>d2ppqa1 d.144.1.6 (A:5-320) Homoserine kinase ThrB {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Homoserine kinase ThrB
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=94.18  E-value=0.0074  Score=35.19  Aligned_cols=31  Identities=16%  Similarity=0.135  Sum_probs=25.7

Q ss_pred             hCCceecCCCCCceEeeeCCCCCcEEEEeeccce
Q psy8010          34 THSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISR   67 (87)
Q Consensus        34 ~~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~   67 (87)
                      ..|++|.|+.+.|++++.+   ....+.||+.+.
T Consensus       182 ~~giIHgDl~~dNvl~~~~---~v~gvIDF~~~~  212 (316)
T d2ppqa1         182 PAGVIHADLFQDNVFFLGD---ELSGLIDFYFAC  212 (316)
T ss_dssp             CEEEECSCCCGGGEEEETT---EEEEECCCTTCE
T ss_pred             ccccccCCcchhhhhcccc---cceeEecccccc
Confidence            4689999999999999874   445789998765

>d1j7la_ d.144.1.6 (A:) Type IIIa 3',5"-aminoglycoside phosphotransferase {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Type IIIa 3',5"-aminoglycoside phosphotransferase
species: Enterococcus faecalis [TaxId: 1351]

Probab=91.83  E-value=0.059  Score=30.15  Aligned_cols=30  Identities=13%  Similarity=0.080  Sum_probs=23.5

Q ss_pred             CceecCCCCCceEeeeCCCCCcEEEEeecccee
Q psy8010          36 SLYRSCSQPQNLVLTGEYPDCDVKLCDFGISRH   68 (87)
Q Consensus        36 ~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~~   68 (87)
                      .++|.|+.+.|+++...   ....+.||+.+..
T Consensus       184 ~l~HgD~~~~Nil~~~~---~~~~lIDwe~a~~  213 (263)
T d1j7la_         184 VFSHGDLGDSNIFVKDG---KVSGFIDLGRSGR  213 (263)
T ss_dssp             EEECSCCCTTSEEEETT---EEEEECCCTTCEE
T ss_pred             EEEEeeccCcceeecCC---ceEEEeechhccc
Confidence            47899999999999863   3446899986653

>d1nd4a_ d.144.1.6 (A:) Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase) {Bacteria (Klebsiella pneumoniae) [TaxId: 573]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase)
species: Bacteria (Klebsiella pneumoniae) [TaxId: 573]

Probab=90.69  E-value=0.06  Score=29.97  Aligned_cols=30  Identities=10%  Similarity=-0.024  Sum_probs=23.8

Q ss_pred             CCceecCCCCCceEeeeCCCCCcEEEEeeccce
Q psy8010          35 HSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISR   67 (87)
Q Consensus        35 ~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~   67 (87)
                      ..++|.|+.+.|+++..+   ....++||+.+.
T Consensus       175 ~~liHgD~~~~Nvl~~~~---~~~~iID~~~~~  204 (255)
T d1nd4a_         175 LVVTHGDACLPNIMVENG---RFSGFIDCGRLG  204 (255)
T ss_dssp             EEEECSSCCGGGEEEETT---EEEEECCCTTCE
T ss_pred             ceEEeCCCCCcceEEeCC---ceEEEEEchhcc
Confidence            347999999999999873   345689998765

>d2pula1 d.144.1.6 (A:5-396) Methylthioribose kinase MtnK {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Methylthioribose kinase MtnK
species: Bacillus subtilis [TaxId: 1423]

Probab=90.33  E-value=0.071  Score=32.15  Aligned_cols=29  Identities=10%  Similarity=0.123  Sum_probs=24.5

Q ss_pred             CCceecCCCCCceEeeeCCCCCcEEEEeeccce
Q psy8010          35 HSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISR   67 (87)
Q Consensus        35 ~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~   67 (87)
                      ..++|.|+.+.|++++.+    .+++.||..+.
T Consensus       223 ~~LiHGDl~~gNIlv~~~----~~~vID~E~a~  251 (392)
T d2pula1         223 ETLIHGDLHTGSIFASEH----ETKVIDPEFAF  251 (392)
T ss_dssp             CEEECSCCCGGGEEECSS----CEEECCCTTCE
T ss_pred             cceeccCCcCCceeEcCC----ceEEechhhcc
Confidence            468999999999999873    58999998765

>d1zyla1 d.144.1.6 (A:4-328) RdoA {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: RdoA
species: Escherichia coli [TaxId: 562]

Probab=86.79  E-value=0.23  Score=28.95  Aligned_cols=28  Identities=11%  Similarity=0.065  Sum_probs=22.2

Q ss_pred             CCceecCCCCCceEeeeCCCCCcEEEEeeccce
Q psy8010          35 HSLYRSCSQPQNLVLTGEYPDCDVKLCDFGISR   67 (87)
Q Consensus        35 ~~~~h~~~~~~~~l~~~~~~~~~~kl~dfg~~~   67 (87)
                      .+++|.|+.+.|++++.    . ..+.||+-+.
T Consensus       192 ~~liHgDlh~~NvL~~~----~-~~~IDFdd~~  219 (325)
T d1zyla1         192 VLRLHGDCHAGNILWRD----G-PMFVDLDDAR  219 (325)
T ss_dssp             CEECCSSCSGGGEEESS----S-EEECCCTTCC
T ss_pred             ceeecCCCCcccEEEeC----C-ceEEechhcc
Confidence            57899999999999864    2 3478997655