Diaphorina citri psyllid: psy8038

Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
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MKFQYKEEHPFEKRKAEGEKIRRKYPDRVPVIVEKAPKARIGDLDKKKYLVPSDLTVGQFYFLIRKRVQLRPEDALFFFVNNVIPPTSATMGSLYQVIVEKAPKARIGDLDKKKYLVPSDLTVGQFYFLIRKREHHEEDFFLYIAYSDENVYGASQN
ccccccccccHHHHHHHHHHHHHHccccccEEEEEccccccccccccEEEEcccccHHHHHHHHHHHcccccccCEEEEEcccccccccHHHHHHHHHHHHccccccccccccccccccccHHHHHHHHHHHccccccccEEEEEEccccccccccc
*****KEEHPFEKRKAEGEKIRRKYPDRVPVIVEKAPKARIGDLDKKKYLVPSDLTVGQFYFLIRKRVQLRPEDALFFFVNNVIPPTSATMGSLYQVIVEKAPKARIGDLDKKKYLVPSDLTVGQFYFLIRKREHHEEDFFLYIAYSDENVYG****
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MKFQYKEEHPFEKRKAEGEKIRRKYPDRVPVIVEKAPKARIGDLDKKKYLVPSDLTVGQFYFLIRKRVQLRPEDALFFFVNNVIPPTSATMGSLYQVIVEKAPKARIGDLDKKKYLVPSDLTVGQFYFLIRKREHHEEDFFLYIAYSDENVYGASQN

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
Gamma-aminobutyric acid receptor-associated protein May play a role in intracellular transport of GABA(A) receptors and its interaction with the cytoskeleton. Involved in apoptosis.confidentQ9DCD6
Gamma-aminobutyric acid receptor-associated protein-like 1 Increases cell-surface expression of kappa-type opioid receptor through facilitating anterograde intracellular trafficking of the receptor.confidentP60518
Gamma-aminobutyric acid receptor-associated protein May play a role in intracellular transport of GABA(A) receptors and its interaction with the cytoskeleton. Involved in apoptosis.confidentO95166

Prediction of Gene Ontology Terms ?

GO Term ?Description ?Confidence Level ?Parent GO Terms ?
GO:0005773 [CC]vacuolevery confidentGO:0005737, GO:0043231, GO:0044464, GO:0043229, GO:0005623, GO:0005622, GO:0005575, GO:0044444, GO:0044424, GO:0043227, GO:0043226
GO:0048471 [CC]perinuclear region of cytoplasmconfidentGO:0005737, GO:0044464, GO:0005623, GO:0005622, GO:0005575, GO:0044444, GO:0044424
GO:0005875 [CC]microtubule associated complexconfidentGO:0043234, GO:0005856, GO:0015630, GO:0032991, GO:0005575, GO:0043232, GO:0044464, GO:0005623, GO:0005622, GO:0044446, GO:0043229, GO:0044430, GO:0044424, GO:0043228, GO:0043226, GO:0044422
GO:0005764 [CC]lysosomeconfidentGO:0005737, GO:0000323, GO:0043231, GO:0005773, GO:0044464, GO:0043229, GO:0005623, GO:0005622, GO:0005575, GO:0044444, GO:0044424, GO:0043227, GO:0043226
GO:0044297 [CC]cell bodyconfidentGO:0005575, GO:0044464, GO:0005623
GO:0006915 [BP]apoptotic processconfidentGO:0010259, GO:0009987, GO:0012501, GO:0044763, GO:0008150, GO:0007569, GO:0044699
GO:0044753 [CC]amphisomeconfidentGO:0005737, GO:0043231, GO:0043229, GO:0005773, GO:0044464, GO:0005776, GO:0005623, GO:0005622, GO:0005575, GO:0044444, GO:0044424, GO:0043227, GO:0043226
GO:0000421 [CC]autophagic vacuole membraneconfidentGO:0005737, GO:0005575, GO:0031090, GO:0043229, GO:0005773, GO:0016020, GO:0044464, GO:0005776, GO:0005623, GO:0005774, GO:0044446, GO:0044444, GO:0044437, GO:0044424, GO:0005622, GO:0043227, GO:0043226, GO:0044422, GO:0043231
GO:0015629 [CC]actin cytoskeletonconfidentGO:0005856, GO:0043232, GO:0044464, GO:0005623, GO:0005622, GO:0005575, GO:0043229, GO:0043228, GO:0044424, GO:0043226
GO:0005790 [CC]smooth endoplasmic reticulumconfidentGO:0005737, GO:0005783, GO:0044464, GO:0043229, GO:0005623, GO:0005622, GO:0005575, GO:0044444, GO:0044424, GO:0043227, GO:0043226, GO:0043231
GO:0048487 [MF]beta-tubulin bindingconfidentGO:0015631, GO:0003674, GO:0005488, GO:0005515, GO:0008092
GO:0000226 [BP]microtubule cytoskeleton organizationconfidentGO:0006996, GO:0007017, GO:0007010, GO:0009987, GO:0016043, GO:0044763, GO:0071840, GO:0008150, GO:0044699
GO:0008017 [MF]microtubule bindingconfidentGO:0015631, GO:0003674, GO:0005488, GO:0005515, GO:0008092
GO:0005874 [CC]microtubuleconfidentGO:0043234, GO:0005856, GO:0015630, GO:0032991, GO:0005575, GO:0043232, GO:0044464, GO:0005623, GO:0005622, GO:0044446, GO:0043229, GO:0044430, GO:0044424, GO:0043228, GO:0043226, GO:0044422
GO:0005829 [CC]cytosolconfidentGO:0005737, GO:0044464, GO:0005623, GO:0005622, GO:0005575, GO:0044444, GO:0044424
GO:0031396 [BP]regulation of protein ubiquitinationconfidentGO:0032268, GO:0080090, GO:0019222, GO:0060255, GO:0051246, GO:0031323, GO:0050794, GO:0065007, GO:0031399, GO:0008150, GO:0050789
GO:0016236 [BP]macroautophagyconfidentGO:0009991, GO:0008152, GO:0044248, GO:0042594, GO:0044699, GO:0051716, GO:0071496, GO:0006914, GO:0009987, GO:0006950, GO:0008150, GO:0009267, GO:0007154, GO:0009056, GO:0031668, GO:0031669, GO:0009605, GO:0050896, GO:0031667, GO:0044237, GO:0033554, GO:0044763
GO:0007268 [BP]synaptic transmissionconfidentGO:0044700, GO:0019226, GO:0032501, GO:0044707, GO:0035637, GO:0050877, GO:0009987, GO:0008150, GO:0044763, GO:0023052, GO:0007267, GO:0007154, GO:0044699, GO:0003008
GO:0008340 [BP]determination of adult lifespanconfidentGO:0032502, GO:0032501, GO:0007568, GO:0044707, GO:0044767, GO:0010259, GO:0008150, GO:0007275, GO:0044699
GO:0006605 [BP]protein targetingconfidentGO:0033036, GO:0034613, GO:0046907, GO:0070727, GO:0006886, GO:0006810, GO:0045184, GO:0044765, GO:0008104, GO:0008150, GO:0071702, GO:0015031, GO:0044763, GO:0009987, GO:0051234, GO:0051649, GO:0051179, GO:0044699, GO:0051641
GO:0050811 [MF]GABA receptor bindingconfidentGO:0005102, GO:0003674, GO:0005488, GO:0005515
GO:0005634 [CC]nucleusconfidentGO:0043231, GO:0044464, GO:0005623, GO:0005622, GO:0005575, GO:0043229, GO:0044424, GO:0043227, GO:0043226
GO:0032590 [CC]dendrite membraneconfidentGO:0016020, GO:0031256, GO:0044463, GO:0031253, GO:0031252, GO:0005623, GO:0044464, GO:0005575, GO:0097458, GO:0032589, GO:0071944, GO:0043005, GO:0005886, GO:0044425, GO:0042995, GO:0044459
GO:0010506 [BP]regulation of autophagyconfidentGO:0009894, GO:0031329, GO:0019222, GO:0031323, GO:0050794, GO:0065007, GO:0008150, GO:0050789
GO:0032839 [CC]dendrite cytoplasmconfidentGO:0005737, GO:0032838, GO:0044463, GO:0044464, GO:0030425, GO:0005622, GO:0005575, GO:0097458, GO:0044444, GO:0005623, GO:0043005, GO:0044424, GO:0042995
GO:0000139 [CC]Golgi membraneconfidentGO:0005737, GO:0005794, GO:0031090, GO:0043229, GO:0016020, GO:0044464, GO:0044444, GO:0005623, GO:0005622, GO:0044446, GO:0044431, GO:0012505, GO:0005575, GO:0044424, GO:0043227, GO:0043226, GO:0044422, GO:0043231
GO:0031410 [CC]cytoplasmic vesicleconfidentGO:0005737, GO:0031982, GO:0044464, GO:0043229, GO:0005623, GO:0005622, GO:0005575, GO:0044444, GO:0044424, GO:0043226
GO:0000407 [CC]pre-autophagosomal structureprobableGO:0005737, GO:0044464, GO:0005623, GO:0005622, GO:0005575, GO:0044444, GO:0044424
GO:0042177 [BP]negative regulation of protein catabolic processprobableGO:0051248, GO:0009895, GO:0010605, GO:0080090, GO:0019222, GO:0060255, GO:0051246, GO:0009894, GO:0008150, GO:0042176, GO:0065007, GO:0048519, GO:0009892, GO:0050789
GO:0051117 [MF]ATPase bindingprobableGO:0003674, GO:0005515, GO:0019899, GO:0005488
GO:0019898 [CC]extrinsic to membraneprobableGO:0005575, GO:0044425, GO:0016020
GO:0040024 [BP]dauer larval developmentprobableGO:0032502, GO:0032501, GO:0044707, GO:0002119, GO:0009791, GO:0002164, GO:0008150, GO:0007275, GO:0044699
GO:0000149 [MF]SNARE bindingprobableGO:0003674, GO:0005488, GO:0005515
GO:0007420 [BP]brain developmentprobableGO:0032502, GO:0032501, GO:0044707, GO:0007399, GO:0048856, GO:0044767, GO:0048513, GO:0008150, GO:0048731, GO:0007275, GO:0044699, GO:0007417
GO:0030659 [CC]cytoplasmic vesicle membraneprobableGO:0043229, GO:0043227, GO:0043226, GO:0005737, GO:0005575, GO:0031090, GO:0016023, GO:0031410, GO:0016020, GO:0031988, GO:0044433, GO:0012505, GO:0012506, GO:0031982, GO:0043231, GO:0044464, GO:0005623, GO:0005622, GO:0044446, GO:0044444, GO:0044424, GO:0044422
GO:0032781 [BP]positive regulation of ATPase activityprobableGO:0009894, GO:0019220, GO:0080090, GO:0019222, GO:0031323, GO:0050789, GO:0043085, GO:0043462, GO:0031329, GO:0051345, GO:0030811, GO:0065007, GO:0044093, GO:0065009, GO:0033121, GO:0019219, GO:0050790, GO:0050794, GO:0051174, GO:0008150, GO:0051171, GO:0009118, GO:0051336, GO:1900542, GO:0006140
GO:0009792 [BP]embryo development ending in birth or egg hatchingprobableGO:0032502, GO:0032501, GO:0044707, GO:0048856, GO:0044767, GO:0009790, GO:0008150, GO:0007275, GO:0044699
GO:0070265 [BP]necrotic cell deathprobableGO:0010259, GO:0009987, GO:0008150, GO:0044763, GO:0007569, GO:0044699
GO:0010940 [BP]positive regulation of necrotic cell deathprobableGO:0010939, GO:0050794, GO:0048518, GO:0065007, GO:0010942, GO:0008150, GO:0010941, GO:0050789, GO:0048522
GO:0048102 [BP]autophagic cell deathprobableGO:0010259, GO:0009987, GO:0012501, GO:0044763, GO:0008150, GO:0007569, GO:0044699
GO:0050832 [BP]defense response to fungusprobableGO:0009607, GO:0009620, GO:0050896, GO:0006952, GO:0006950, GO:0008150, GO:0051707, GO:0051704
GO:0032258 [BP]CVT pathwayprobableGO:0008104, GO:0072666, GO:0072665, GO:0044699, GO:0070727, GO:0006886, GO:0071702, GO:0016482, GO:0006810, GO:0072594, GO:0034613, GO:0006623, GO:0006605, GO:0045184, GO:0015031, GO:0044765, GO:0008150, GO:0051649, GO:0051234, GO:0051179, GO:0051641, GO:0033036, GO:0046907, GO:0007034, GO:0033365, GO:0044763, GO:0009987
GO:0009405 [BP]pathogenesisprobableGO:0008150, GO:0051704
GO:0016239 [BP]positive regulation of macroautophagyprobableGO:0032106, GO:0032107, GO:0032104, GO:0032103, GO:0031329, GO:0032101, GO:0009896, GO:0048584, GO:0031323, GO:0009894, GO:0032109, GO:0010647, GO:0010646, GO:0050789, GO:0009893, GO:0019222, GO:0010508, GO:0065007, GO:0048518, GO:0010506, GO:0031325, GO:0016241, GO:0031331, GO:0048583, GO:0050794, GO:0008150, GO:0080134, GO:0080135, GO:0048522
GO:0000747 [BP]conjugation with cellular fusionprobableGO:0000746, GO:0000003, GO:0009987, GO:0019953, GO:0044764, GO:0008150, GO:0051704
GO:0006995 [BP]cellular response to nitrogen starvationprobableGO:0009605, GO:0051716, GO:0031669, GO:0009267, GO:0043562, GO:0050896, GO:0009987, GO:0031668, GO:0031667, GO:0008150, GO:0006950, GO:0071496, GO:0044763, GO:0044699, GO:0042594, GO:0007154, GO:0033554, GO:0009991
GO:0000422 [BP]mitochondrion degradationprobableGO:0006914, GO:0009987, GO:0044237, GO:0044248, GO:0008150, GO:0008152, GO:0009056
GO:0031386 [MF]protein tagprobableGO:0003674
GO:0034727 [BP]piecemeal microautophagy of nucleusprobableGO:0016044, GO:0006914, GO:0009987, GO:0016237, GO:0010324, GO:0044248, GO:0061024, GO:0044763, GO:0044237, GO:0008152, GO:0071840, GO:0008150, GO:0009056, GO:0044699, GO:0016043
GO:0006944 [BP]cellular membrane fusionprobableGO:0016044, GO:0009987, GO:0016043, GO:0061025, GO:0061024, GO:0044763, GO:0071840, GO:0008150, GO:0044699
GO:0000045 [BP]autophagic vacuole assemblyprobableGO:0009991, GO:0022607, GO:0008152, GO:0016236, GO:0044248, GO:0042594, GO:0044699, GO:0051716, GO:0016043, GO:0071840, GO:0071496, GO:0006914, GO:0009987, GO:0006950, GO:0044763, GO:0009267, GO:0007154, GO:0070925, GO:0009056, GO:0006996, GO:0007033, GO:0031668, GO:0031669, GO:0009605, GO:0050896, GO:0031667, GO:0044237, GO:0044085, GO:0033554, GO:0008150
GO:0048193 [BP]Golgi vesicle transportprobableGO:0009987, GO:0016192, GO:0046907, GO:0006810, GO:0044765, GO:0008150, GO:0051649, GO:0044763, GO:0051234, GO:0051179, GO:0044699, GO:0051641

Prediction of Enzyme Commission Number ?

No EC number assigned to the protein, probably not an enzyme!

Spatial Structural Prediction

Structural Models Based on Templates

Template: 3M95, chain A
Confidence level:very confident
Coverage over the Query: 1-96,134-152
View the alignment between query and template
View the model in PyMOL
Template: 3H9D, chain A
Confidence level:very confident
Coverage over the Query: 97-147
View the alignment between query and template
View the model in PyMOL