Diaphorina citri psyllid: psy8076

Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-------720-------730-------
MDQFKCDISLDFSGNKINECTSNQNDKYYDAYRKSIEAPESFWTDVGNMATWSKKWDRILDNSDQPFTKWFVGGEINACYNAIDRHVERGMAKKVALIHDSPVTKSIRKVTYAELQEQVSLLAGSLAAIGVSAGDRVLIYMPLIPEAIVSMLATVRLGAIHSVVFGGFAARELCARLEHAKPKVIIAASCGVEPNKVVRYKTILNEALEISSCKPDYCIIFQRRCVEEAELTPGYDILWDDALAQRLSHRCVPVEANDPLYILYTSGTTGKPQGCSELRSEDQPKGILRPVGGHIATLAWTMSVIYNMGQDDVWWTASDMGWVVGHSYICYGPLAAGITSVMYEGKPDRTPDPSQYYRVIHNHKVNGLFTAPTALRVIRREDKDSTLGAQYSTDSLRYLFVAGEHCDHETKNWAEKSFNVTMLNHWWQTETGHSITAHCLGYQHDTVPPKYSTGLPFPGYDGKYVNIVMLNWLDGRAHCVRILPESLRKNVPKGQNATHFTSVEVRIIRNDGSECEPHELGRIVVKLPLPPGTMSTLYKAPQRFMKIYFTKFPGYYDTMDAGYYDENGYIYVTARDDDVINVAGHRLSTSALEDVVLSHPDVGDTAVIGVPEPTKGEIPFCLYIKKRIPLDKMGFSGLIGFGKLERPTSLLTNPIRVLIKPYGPISSIYCTRSDEEIGKELKELVREAIGPIAAFKLSTSVTGLPRTRSGKTARKSIVDMARNKPLRVRLVYLQQKL
ccccccccccccccccHHHHHcccHHHHHHHHHHHHHcHHHHHHHHHccccccccccccccccccccccccccccHHHHHHHHHHHHcccccccEEEEEcccccccEEEEEHHHHHHHHHHHHHHHHHcccccccEEEEEcccHHHHHHHHHHHHHccccEEEEcccccHHHHHHHHHcccccEEEEcccccccccccccHHHHHHHHHHccccccEEEEEEccccccccccccccccHHHHHHHccccccccccccccEEEEEccccccccccccccccccccccCEccccHHHHHHHHHHHHHcccccccEEEEcccccEEccccHHcHHHcccccEEEEEcccccccccccccEEEEccccccEEECcHHHHHHHHHcccccccccccccccccccccccccccHHHHHHHHHcccccccccccccccccHHHccccccccccccccccccccccccccccHHHHHHHcccccccccccccccccccccccccccccccEEEEEEccccccccccccCEEEEEcccccccccccccccHHHHHHHHccccccEEccccCEEcccccEEEEcccccEEEccccccccHHHHHHHHHcccEEEEEEEcccccccccccEEEEEEcccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHcccccccccEEEcccccccccHHHHHHHHHHHHcccccccccccccccc
*********LDFSGNKINECTSNQNDKYYDAYRKSIEAPESFWTDVGNMATWSKKWDRILDNSDQPFTKWFVGGEINACYNAIDRHVERGMAKKVALIHDSPVTKSIRKVTYAELQEQVSLLAGSLAAIGVSAGDRVLIYMPLIPEAIVSMLATVRLGAIHSVVFGGFAARELCARLEHAKPKVIIAASCGVEPNKVVRYKTILNEALEISSCKPDYCIIFQRRCVEEAELTPGYDILWDDALAQRLSHRCVPVEANDPLYILYTSGTTGKPQGCSELRSEDQPKGILRPVGGHIATLAWTMSVIYNMGQDDVWWTASDMGWVVGHSYICYGPLAAGITSVMYEGKPDRTPDPSQYYRVIHNHKVNGLFTAPTALRVIRREDKDSTLGAQYSTDSLRYLFVAGEHCDHETKNWAEKSFNVTMLNHWWQTETGHSITAHCLGYQHDTVPPKYSTGLPFPGYDGKYVNIVMLNWLDGRAHCVRILPESLRKNVPKGQNATHFTSVEVRIIRNDGSECEPHELGRIVVKLPLPPGTMSTLYKAPQRFMKIYFTKFPGYYDTMDAGYYDENGYIYVTARDDDVINVAGHRLSTSALEDVVLSHPDVGDTAVIGVPEPTKGEIPFCLYIKKRIPLDKMGFSGLIGFGKLERPTSLLTNPIRVLIKPYGPISSIYCTRSDEEIGKELKELVREAIGPIAAFKLSTSVTGLPRTRSGKTARKSIVDMARNKPLRVRLVYLQ***
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MDQFKCDISLDFSGNKINECTSNQNDKYYDAYRKSIEAPESFWTDVGNMATWSKKWDRILDNSDQPFTKWFVGGEINACYNAIDRHVERGMAKKVALIHDSPVTKSIRKVTYAELQEQVSLLAGSLAAIGVSAGDRVLIYMPLIPEAIVSMLATVRLGAIHSVVFGGFAARELCARLEHAKPKVIIAASCGVEPNKVVRYKTILNEALEISSCKPDYCIIFQRRCVEEAELTPGYDILWDDALAQRLSHRCVPVEANDPLYILYTSGTTGKPQGCSELRSEDQPKGILRPVGGHIATLAWTMSVIYNMGQDDVWWTASDMGWVVGHSYICYGPLAAGITSVMYEGKPDRTPDPSQYYRVIHNHKVNGLFTAPTALRVIRREDKDSTLGAQYSTDSLRYLFVAGEHCDHETKNWAEKSFNVTMLNHWWQTETGHSITAHCLGYQHDTVPPKYSTGLPFPGYDGKYVNIVMLNWLDGRAHCVRILPESLRKNVPKGQNATHFTSVEVRIIRNDGSECEPHELGRIVVKLPLPPGTMSTLYKAPQRFMKIYFTKFPGYYDTMDAGYYDENGYIYVTARDDDVINVAGHRLSTSALEDVVLSHPDVGDTAVIGVPEPTKGEIPFCLYIKKRIPLDKMGFSGLIGFGKLERPTSLLTNPIRVLIKPYGPISSIYCTRSDEEIGKELKELVREAIGPIAAFKLSTSVTGLPRTRSGKTARKSIVDMARNKPLRVRLVYLQQKL

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
Acyl-CoA synthetase short-chain family member 3, mitochondrial Activates acetate so that it can be used for lipid synthesis or for energy generation.confidentA7MB45
Acyl-CoA synthetase short-chain family member 3, mitochondrial Activates acetate so that it can be used for lipid synthesis or for energy generation.confidentQ14DH7
Acetyl-coenzyme A synthetase confidentA4WJG1

Prediction of Gene Ontology Terms ?

GO Term ?Description ?Confidence Level ?Parent GO Terms ?
GO:0044710 [BP]single-organism metabolic processprobableGO:0008150, GO:0008152
GO:0006085 [BP]acetyl-CoA biosynthetic processprobableGO:0006084, GO:1901576, GO:0035383, GO:0051186, GO:0006637, GO:0035384, GO:0071704, GO:0006732, GO:0009987, GO:0051188, GO:0044237, GO:0044249, GO:0009058, GO:0009108, GO:0071616, GO:0008152, GO:0006793, GO:0008150
GO:0044444 [CC]cytoplasmic partprobableGO:0005737, GO:0044464, GO:0005623, GO:0005622, GO:0005575, GO:0044424
GO:0003987 [MF]acetate-CoA ligase activityprobableGO:0016878, GO:0016405, GO:0003824, GO:0003674, GO:0016874, GO:0016877
GO:0005730 [CC]nucleolusprobableGO:0005575, GO:0043232, GO:0031981, GO:0043233, GO:0005634, GO:0044464, GO:0031974, GO:0005622, GO:0044446, GO:0070013, GO:0043229, GO:0043228, GO:0044428, GO:0005623, GO:0044424, GO:0043227, GO:0043226, GO:0044422, GO:0043231

Prediction of Enzyme Commission Number ?

EC Number ?Description ?Confidence Level ?
6.-.-.-Ligases.probable
6.2.-.-Forming carbon-sulfur bonds.probable
6.2.1.-Acid--thiol ligases.probable

Spatial Structural Prediction

Structural Models Based on Templates

Template: 1RY2, chain A
Confidence level:very confident
Coverage over the Query: 26-270,283-468,507-626,674-722
View the alignment between query and template
View the model in PyMOL
Template: 3KXW, chain A
Confidence level:very confident
Coverage over the Query: 78-224,236-269,283-455,473-628,672-735
View the alignment between query and template
View the model in PyMOL
Template: 3B7W, chain A
Confidence level:confident
Coverage over the Query: 111-232,249-462,498-618,659-719
View the alignment between query and template
View the model in PyMOL
Template: 1MD9, chain A
Confidence level:probable
Coverage over the Query: 111-270,283-430,466-694
View the alignment between query and template
View the model in PyMOL