Diaphorina citri psyllid: psy8077


Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220---
MTSTKPPKVAIKSVQVFGRKPPKVAIKSVQVFGRKKSATAVAYCKEGKGNLRVDGRPLEMIEPKLLQYKLQEPILLLGTKSATAVAYCKEGKGNLRVDGRPLEMIEPKLLQYKLQEPILLLGKDKFAGVDIRVRVNGGGHVAQIYAIRQAISKALVAYYQKCKQATGLLGTEKMLVKSTLTLLGKDKFAGVDIRVRVNGGGHVAQIYAIRQAISKALVAYYQK
ccccccccEEEEEEEECcccccccccHHHHHccccHHHHHHHHHHcccccccccccccccccHHHHHHHcccEEEEcccccEEEEEEEECccEEEEEcccccccccHHHHHHHHHHHHHHHcccccccccEEEEEEcccHHHHHHHHHHHHHHHHHHHcHHcHHHccccccccccccccccccccccccccccEEEEEccccHHHHHHHHHHHHHHHHHHHcc
**********IKSVQVFGRKPPKVAIKSVQVFGRKKSATAVAYCKEGKGNLRVDGRPLEMIEPKLLQYKLQEPILLLGTKSATAVAYCKEGKGNLRVDGRPLEMIEPKLLQYKLQEPILLLGKDKFAGVDIRVRVNGGGHVAQIYAIRQAISKALVAYYQKCKQATGLLGTEKMLVKSTLTLLGKDKFAGVDIRVRVNGGGHVAQIYAIRQAISKALVAYYQK
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MTSTKPPKVAIKSVQVFGRKPPKVAIKSVQVFGRKKSATAVAYCKEGKGNLRVDGRPLEMIEPKLLQYKLQEPILLLGTKSATAVAYCKEGKGNLRVDGRPLEMIEPKLLQYKLQEPILLLGKDKFAGVDIRVRVNGGGHVAQIYAIRQAISKALVAYYQKCKQATGLLGTEKMLVKSTLTLLGKDKFAGVDIRVRVNGGGHVAQIYAIRQAISKALVAYYQK

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
40S ribosomal protein S16 confidentQ3T0X6
40S ribosomal protein S16 confidentQ22054
40S ribosomal protein S16 confidentQ9W237

Prediction of Gene Ontology Terms ?

GO Term ?Description ?Confidence Level ?Parent GO Terms ?
GO:0022627 [CC]cytosolic small ribosomal subunitprobableGO:0005737, GO:0005575, GO:0005622, GO:0022626, GO:0015935, GO:0043232, GO:0005829, GO:0044464, GO:0043229, GO:0005623, GO:0044391, GO:0044446, GO:0044444, GO:0044445, GO:0044424, GO:0032991, GO:0043228, GO:0030529, GO:0043226, GO:0044422, GO:0005840
GO:0016020 [CC]membraneprobableGO:0005575
GO:0006364 [BP]rRNA processingprobableGO:0090304, GO:0034641, GO:0006807, GO:0034660, GO:1901360, GO:0006139, GO:0044260, GO:0042254, GO:0071704, GO:0010467, GO:0071840, GO:0022613, GO:0034470, GO:0009987, GO:0006725, GO:0008150, GO:0008152, GO:0046483, GO:0016070, GO:0044238, GO:0016072, GO:0044237, GO:0043170, GO:0044085, GO:0006396
GO:0042274 [BP]ribosomal small subunit biogenesisprobableGO:0022613, GO:0044085, GO:0008150, GO:0042254, GO:0071840
GO:0044763 [BP]single-organism cellular processprobableGO:0009987, GO:0008150, GO:0044699
GO:0030686 [CC]90S preribosomeprobableGO:0032991, GO:0044464, GO:0030684, GO:0005623, GO:0030529, GO:0005575, GO:0044424, GO:0005622
GO:0003723 [MF]RNA bindingprobableGO:0097159, GO:0003674, GO:1901363, GO:0003676, GO:0005488
GO:0005618 [CC]cell wallprobableGO:0005575, GO:0071944, GO:0044464, GO:0005623, GO:0030312
GO:0005811 [CC]lipid particleprobableGO:0005737, GO:0044464, GO:0005623, GO:0005622, GO:0005575, GO:0044444, GO:0044424
GO:0003735 [MF]structural constituent of ribosomeprobableGO:0003674, GO:0005198
GO:0009506 [CC]plasmodesmaprobableGO:0055044, GO:0005575, GO:0030054, GO:0005911
GO:0009507 [CC]chloroplastprobableGO:0005737, GO:0009536, GO:0043231, GO:0044464, GO:0043229, GO:0005623, GO:0005622, GO:0005575, GO:0044444, GO:0044424, GO:0043227, GO:0043226
GO:0006412 [BP]translationprobableGO:0071704, GO:0044267, GO:0008152, GO:0044260, GO:0044238, GO:0019538, GO:0009987, GO:0009058, GO:0044237, GO:0043170, GO:0044249, GO:0010467, GO:0009059, GO:0008150, GO:0034645, GO:1901576

Prediction of Enzyme Commission Number ?

No EC number assigned to the protein, probably not an enzyme!


Spatial Structural Prediction

Structural Models Based on Templates

Template: 2ZKQ, chain i
Confidence level:very confident
Coverage over the Query: 27-64,108-202
View the alignment between query and template
View the model in PyMOL
Template: 2ZKQ, chain i
Confidence level:very confident
Coverage over the Query: 72-105,120-128,169-222
View the alignment between query and template
View the model in PyMOL