Diaphorina citri psyllid: psy8080

Local Sequence Feature Prediction

Prediction and Method	Result

Residue Number Marker

Protein Sequence

Secondary Structure (Consensus)

Disordered Region (Consensus)

Transmembrane Helix (Consensus)

Signal Peptide (Consensus)

Coiled Coil (COILS)

--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-----

MRGQVAFFGTVNSFVHGVMYGYYLVSAFDPQNKWNLWWKKYITQLQLVRVLPGFGFRSSEQMELVVEEVHHSATTGLETYLKFQFIICGIHCTIQLCSSNCKYPQFMLYFGLSQDIFMFFLFFDFYKKTYWSKGGAPPPPPEENYLKAENKVALIKETTMEKDMQETAVNAAKEGLEKYNIEREVAGHVKQHFDNTYGPYWQCTVGRNFGSYVSYDDFYTYFYLGKVAILLLQWFSGDPIRFTCMEVDYSDTPLGRSRAGAVWLFFFSRVLDLVDTKDSQVTFLHVYHHTAVVMFAWLAVKFVPGGHGVFFGTINCFIHVVMYSYYSLTLYNPEYKNVWWKKYLTQIQMMQFVAVGLHAILALLTPNCNYPKSLIIIALPQDIFMFVLFADFYRKTYMKPATSGKASQPIKTKTS

ccccEEcccccccHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHcccccccccHHHHHHHHHHcccccccccccccEEEEEEEEEcccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccEEEECcccccccccccHHHHHHHHHHHHHHHHHccccccccEEHHHHHHHHHHHHHHHEEECccccCEEEEEEHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccc

*RGQVAFFGTVNSFVHGVMYGYYLVSAFDPQNKWNLWWKKYITQLQLVRVLPGFGFRSSEQMELVVEEVHHSATTGLETYLKFQFIICGIHCTIQLCSSNCKYPQFMLYFGLSQDIFMFFLFFDFYKKTYWS*******************************************LEKYNIEREVAGHVKQHFDNTYGPYWQCTVGRNFGSYVSYDDFYTYFYLGKVAILLLQWFSGDPIRFTCMEVDYSDTPLGRSRAGAVWLFFFSRVLDLVDTKDSQVTFLHVYHHTAVVMFAWLAVKFVPGGHGVFFGTINCFIHVVMYSYYSLTLYNPEYKNVWWKKYLTQIQMMQFVAVGLHAILALLTPNCNYPKSLIIIALPQDIFMFVLFADFYRKTYM*****************

xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxHHHHHHHHHHHHHHHHHHxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxHHHHHHHHHHHHHHHHHHxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxHHHHHHHHHHHHHHHHHHHxxxxxxxxHHHHHHHHHHHHHHHHHHHHHxxxxxxxxxxxxxxHHHHHHHHHHHHHHHHHHHHHxxxxxxxxHHHHHHHHHHHHHHHHHHxxxxxxxxxxxxxxxxxxxxxxxxx

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Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries

Annotation	Function Description	Confidence Level	Reference Protein
Dynein light chain 1, cytoplasmic	Acts as a non-catalytic accessory component of a dynein complex.	confident	Q22799

Prediction of Gene Ontology Terms

GO Term	Description	Confidence Level	Parent GO Terms
GO:0008180 [CC]	signalosome	probable	GO:0043234, GO:0005575, GO:0032991, GO:0043231, GO:0005634, GO:0044464, GO:0005623, GO:0005622, GO:0044446, GO:0043229, GO:0044428, GO:0044424, GO:0043227, GO:0043226, GO:0044422
GO:0016459 [CC]	myosin complex	probable	GO:0043234, GO:0005856, GO:0032991, GO:0015629, GO:0043232, GO:0044464, GO:0005623, GO:0005622, GO:0044446, GO:0043229, GO:0044430, GO:0005575, GO:0044424, GO:0043228, GO:0043226, GO:0044422
GO:0042326 [BP]	negative regulation of phosphorylation	probable	GO:0042325, GO:0010563, GO:0019220, GO:0019222, GO:0045936, GO:0031324, GO:0031323, GO:0050794, GO:0051174, GO:0065007, GO:0008150, GO:0048519, GO:0009892, GO:0050789, GO:0048523
GO:0009653 [BP]	anatomical structure morphogenesis	probable	GO:0032502, GO:0048856, GO:0008150
GO:0030235 [MF]	nitric-oxide synthase regulator activity	probable	GO:0030234, GO:0003674
GO:0043186 [CC]	P granule	probable	GO:0005737, GO:0035770, GO:0043232, GO:0060293, GO:0044464, GO:0043229, GO:0005623, GO:0030529, GO:0005575, GO:0044444, GO:0043228, GO:0044424, GO:0032991, GO:0005622, GO:0043226, GO:0045495
GO:0019367 [BP]	fatty acid elongation, saturated fatty acid	probable	GO:0006633, GO:0006631, GO:0019752, GO:0016053, GO:0044249, GO:0044281, GO:0044283, GO:0072330, GO:1901576, GO:0044710, GO:0044711, GO:0071704, GO:0006629, GO:0009987, GO:0032787, GO:0009058, GO:0008150, GO:0008152, GO:0043436, GO:0044255, GO:0008610, GO:0044238, GO:0006082, GO:0046394, GO:0030497, GO:0044237
GO:0042761 [BP]	very long-chain fatty acid biosynthetic process	probable	GO:0006633, GO:0006631, GO:0019752, GO:0044249, GO:0044281, GO:0044283, GO:0072330, GO:1901576, GO:0044710, GO:0044711, GO:0071704, GO:0006629, GO:0009987, GO:0032787, GO:0009058, GO:0008150, GO:0008152, GO:0000038, GO:0043436, GO:0044255, GO:0008610, GO:0044238, GO:0006082, GO:0046394, GO:0016053, GO:0044237
GO:0016020 [CC]	membrane	probable	GO:0005575
GO:0005829 [CC]	cytosol	probable	GO:0005737, GO:0044464, GO:0005623, GO:0005622, GO:0005575, GO:0044444, GO:0044424
GO:0009922 [MF]	fatty acid elongase activity	probable	GO:0004312, GO:0003824, GO:0016740, GO:0016746, GO:0016747, GO:0003674
GO:0000776 [CC]	kinetochore	probable	GO:0043234, GO:0005575, GO:0005622, GO:0032991, GO:0043232, GO:0044464, GO:0005623, GO:0043226, GO:0044446, GO:0043229, GO:0043228, GO:0044424, GO:0044427, GO:0005694, GO:0000775, GO:0044422
GO:0048731 [BP]	system development	probable	GO:0032502, GO:0032501, GO:0044707, GO:0048856, GO:0008150, GO:0007275, GO:0044699
GO:0034625 [BP]	fatty acid elongation, monounsaturated fatty acid	probable	GO:0006633, GO:0006631, GO:0019752, GO:0016053, GO:0044249, GO:0044281, GO:0044283, GO:0072330, GO:1901576, GO:0044710, GO:0044711, GO:0071704, GO:0006629, GO:0009987, GO:0032787, GO:0009058, GO:0008150, GO:0008152, GO:0043436, GO:0044255, GO:0008610, GO:0044238, GO:0006082, GO:0046394, GO:0030497, GO:0044237, GO:0019368
GO:0034626 [BP]	fatty acid elongation, polyunsaturated fatty acid	probable	GO:0006633, GO:0006631, GO:0019752, GO:0016053, GO:0044249, GO:0044281, GO:0044283, GO:0072330, GO:1901576, GO:0044710, GO:0044711, GO:0071704, GO:0006629, GO:0009987, GO:0032787, GO:0009058, GO:0008150, GO:0008152, GO:0043436, GO:0044255, GO:0008610, GO:0044238, GO:0006082, GO:0046394, GO:0030497, GO:0044237, GO:0019368
GO:0005814 [CC]	centriole	probable	GO:0005737, GO:0005856, GO:0015630, GO:0043228, GO:0005575, GO:0043232, GO:0005813, GO:0044464, GO:0044444, GO:0005623, GO:0005815, GO:0044446, GO:0043229, GO:0044430, GO:0044450, GO:0044424, GO:0005622, GO:0043226, GO:0044422
GO:0005783 [CC]	endoplasmic reticulum	probable	GO:0005737, GO:0043231, GO:0044464, GO:0043229, GO:0005623, GO:0005622, GO:0005575, GO:0044444, GO:0044424, GO:0043227, GO:0043226
GO:0005868 [CC]	cytoplasmic dynein complex	probable	GO:0005737, GO:0043234, GO:0015630, GO:0032991, GO:0005575, GO:0043232, GO:0005856, GO:0044464, GO:0043229, GO:0005623, GO:0005622, GO:0044446, GO:0044444, GO:0044430, GO:0043226, GO:0044424, GO:0030286, GO:0043228, GO:0005875, GO:0044422
GO:0008092 [MF]	cytoskeletal protein binding	probable	GO:0003674, GO:0005488, GO:0005515
GO:0042803 [MF]	protein homodimerization activity	probable	GO:0046983, GO:0003674, GO:0005515, GO:0042802, GO:0005488
GO:0072686 [CC]	mitotic spindle	probable	GO:0043234, GO:0005856, GO:0015630, GO:0032991, GO:0005575, GO:0043232, GO:0044464, GO:0005623, GO:0005622, GO:0044446, GO:0043229, GO:0005819, GO:0044430, GO:0044424, GO:0043228, GO:0043226, GO:0044422
GO:0006915 [BP]	apoptotic process	probable	GO:0010259, GO:0009987, GO:0012501, GO:0044763, GO:0008150, GO:0007569, GO:0044699
GO:0007292 [BP]	female gamete generation	probable	GO:0044702, GO:0000003, GO:0032504, GO:0019953, GO:0022414, GO:0032501, GO:0008150, GO:0044699, GO:0007276, GO:0048609
GO:0016043 [BP]	cellular component organization	probable	GO:0008150, GO:0071840
GO:0035085 [CC]	cilium axoneme	probable	GO:0005737, GO:0005575, GO:0044463, GO:0043231, GO:0032838, GO:0031514, GO:0044441, GO:0044464, GO:0043229, GO:0005623, GO:0043226, GO:0044446, GO:0044444, GO:0097014, GO:0005929, GO:0044424, GO:0042995, GO:0043227, GO:0005930, GO:0044422, GO:0005622

Prediction of Enzyme Commission Number

No EC number assigned to the protein, probably not an enzyme!

Spatial Structural Prediction

Structural Models Based on Templates

Template: 1YO3, chain A
Confidence level:very confident
Coverage over the Query: 152-234
View the alignment between query and template
View the model in PyMOL