Psyllid ID: psy8080

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-----
Protein Sequence
MRGQVAFFGTVNSFVHGVMYGYYLVSAFDPQNKWNLWWKKYITQLQLVRVLPGFGFRSSEQMELVVEEVHHSATTGLETYLKFQFIICGIHCTIQLCSSNCKYPQFMLYFGLSQDIFMFFLFFDFYKKTYWSKGGAPPPPPEENYLKAENKVALIKETTMEKDMQETAVNAAKEGLEKYNIEREVAGHVKQHFDNTYGPYWQCTVGRNFGSYVSYDDFYTYFYLGKVAILLLQWFSGDPIRFTCMEVDYSDTPLGRSRAGAVWLFFFSRVLDLVDTKDSQVTFLHVYHHTAVVMFAWLAVKFVPGGHGVFFGTINCFIHVVMYSYYSLTLYNPEYKNVWWKKYLTQIQMMQFVAVGLHAILALLTPNCNYPKSLIIIALPQDIFMFVLFADFYRKTYMKPATSGKASQPIKTKTS
Secondary Structure (PSIPRED)
ccccEEcccccccHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHcccccccccHHHHHHHHHHcccccccccccccEEEEEEEEEcccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccEEEEEcccccccccccHHHHHHHHHHHHHHHHHccccccccEEHHHHHHHHHHHHHHHEEEEccccEEEEEEEHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
cccccHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHEEEEHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccHHcccccccccEEEEEEcccccHHHHHHHHHHHHHHHEccHHHHHHHHHHHHHHHHcccEEEEEEcEEEEEEEEEcccEEEEHHHHHHHHHHHHcccccEEEEccccccccHHHHHHHHHHHHHHHHHHHHHHccccccEEEEEEEHHcHHHHHEEEEEEEccccccHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHccccccccc
Coil and Loop (DISEMBL)
MRGQVAFFGTVNSFVHGVMYGYYLvsafdpqnkwNLWWKKYITQLQLVrvlpgfgfrssEQMELVVEEVHHSATTGLETYLKFQFIICGIHCtiqlcssnckypqfmlYFGLSQDIFMFFLFFDFYKKtywskggapppppeenylkAENKVALIKETTMEKDMQETAVNAAKEGLEKYNIEREVAGHVKqhfdntygpywqctvgrnfgsyvsyddfytYFYLGKVAILLLQWfsgdpirftcmevdysdtplgrsraGAVWLFFFSRVLdlvdtkdsqvtfLHVYHHTAVVMFAWLAVKfvpgghgvffgTINCFIHVVMYSYYSltlynpeykNVWWKKYLTQIQMMQFVAVGLHAILALltpncnypkslIIIALPQDIFMFVLFADFyrktymkpatsgkasqpiktkts
Flexible Loop (DISEMBL)
MRGQVAFFGTVNSFVHGVMYGYYLVSAFDPQNKWNLWWKKYITQLQLVRVLPGFGFRSSEQMELVVEEVHHSATTGLETYLKFQFIICGIHCTIQLCSSNCKYPQFMLYFGLSQDIFMFFLFFDFYKKTYWSKGGAPPPPPEENYLKAENKVALIKETTMEKDMQETAVNAAKEGLEKYNIEREVAGHVKQHFDNTYGPYWQCTVGRNFGSYVSYDDFYTYFYLGKVAILLLQWFSGDPIRFTCMEVDYSDTPLGRSRAGAVWLFFFSRVLDLVDTKDSQVTFLHVYHHTAVVMFAWLAVKFVPGGHGVFFGTINCFIHVVMYSYYSLTLYNPEYKNVWWKKYLTQIQMMQFVAVGLHAILALLTPNCNYPKSLIIIALPQDIFMFVLFADFYRKTYmkpatsgkasqpiktkts
Low Complexity Region (SEG)
MRGQVAFFGTVNSFVHGVMYGYYLVSAFDPQNKWNLWWKKYITQLQLVRVLPGFGFRSSEQMELVVEEVHHSATTGLETYLKFQFIICGIHCTIQLCSSNCKYPQFMLYFGLSQDIfmfflffdfYKKTYWSKGGAPPPPPEENYLKAENKVALIKETTMEKDMQETAVNAAKEGLEKYNIEREVAGHVKQHFDNTYGPYWQCTVGRNFGSYVSYDDFYTYFYLGKVAILLLQWFSGDPIRFTCMEVDYSDTPLGRSRAGAVWLFFFSRVLDLVDTKDSQVTFLHVYHHTAVVMFAWLAVKFVPGGHGVFFGTINCFIHVVMYSYYSLTLYNPEYKNVWWKKYLTQIQMMQFVAVGLHAILALLTPNCNYPKSLIIIALPQDIFMFVLFADFYRKTYMKPATSGKASQPIKTKTS
Disordered region (IsUnstruct)
****VAFFGTVNSFVHGVMYGYYLVSAFDPQNKWNLWWKKYITQLQLVRVLPGFGFRSSEQMELVVEEVHHSATTGLETYLKFQFIICGIHCTIQLCSSNCKYPQFMLYFGLSQDIFMFFLFFDFYKKTYWS*******************************************LEKYNIEREVAGHVKQHFDNTYGPYWQCTVGRNFGSYVSYDDFYTYFYLGKVAILLLQWFSGDPIRFTCMEVDYSDTPLGRSRAGAVWLFFFSRVLDLVDTKDSQVTFLHVYHHTAVVMFAWLAVKFVPGGHGVFFGTINCFIHVVMYSYYSLTLYNPEYKNVWWKKYLTQIQMMQFVAVGLHAILALLTPNCNYPKSLIIIALPQDIFMFVLFADFYRKTYM*****************
Disordered Region (DISOPRED)
*RGQVAFFGTVNSFVHGVMYGYYLVSAFDPQNKWNLWWKKYITQLQLVRVLPGFGFRSSEQMELVVEEVHHSATTGLETYLKFQFIICGIHCTIQLCSSNCKYPQFMLYFGLSQDIFMFFLFFDFYK****************************************************NIEREVAGHVKQHFDNTYGPYWQCTVGRNFGSYVSYDDFYTYFYLGKVAILLLQWFSGDPIRFTCMEVDYSDTPLGRSRAGAVWLFFFSRVLDLVDTKDSQVTFLHVYHHTAVVMFAWLAVKFVPGGHGVFFGTINCFIHVVMYSYYSLTLYNPEYKNVWWKKYLTQIQMMQFVAVGLHAILALLTPNCNYPKSLIIIALPQDIFMFVLFADFYR*********************
Disordered Region (DISEMBL)
MRGQVAFFGTVNSFVHGVMYGYYLVSAFDPQNKWNLWWKKYITQLQLVRVLPGFGFRSSEQMELVVEEVHHSATTGLETYLKFQFIICGIHCTIQLCSSNCKYPQFMLYFGLSQDIFMFFLFFDFYKKTYWSKGGAPPPPPEENYLKAENKVALIKETTMEKDMQETAVNAAKEGLEKYNIEREVAGHVKQHFDNTYGPYWQCTVGRNFGSYVSYDDFYTYFYLGKVAILLLQWFSGDPIRFTCMEVDYSDTPLGRSRAGAVWLFFFSRVLDLVDTKDSQVTFLHVYHHTAVVMFAWLAVKFVPGGHGVFFGTINCFIHVVMYSYYSLTLYNPEYKNVWWKKYLTQIQMMQFVAVGLHAILALLTPNCNYPKSLIIIALPQDIFMFVLFADFYRKTYMK****************
Disordered Region (DISPRO)
***QVAFFGTVNSFVHGVMYGYYLVSAFDPQNKWNLWWKKYITQLQLVRVLPGFGFRSSEQMELVVEEVHHSATTGLETYLKFQFIICGIHCTIQLCSSNCKYPQFMLYFGLSQDIFMFFLFFDFYKKTYWSKGG***************KVALIKETTMEKDMQETAVNAAKEGLEKYNIEREVAGHVKQHFDNTYGPYWQCTVGRNFGSYVSYDDFYTYFYLGKVAILLLQWFSGDPIRFTCMEVDYSDTPLGRSRAGAVWLFFFSRVLDLVDTKDSQVTFLHVYHHTAVVMFAWLAVKFVPGGHGVFFGTINCFIHVVMYSYYSLTLYNPEYKNVWWKKYLTQIQMMQFVAVGLHAILALLTPNCNYPKSLIIIALPQDIFMFVLFADFYRKTYMKP***************
Transmembrane Helix (TMHMM)
iiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MRGQVAFFGTVNSFVHGVMYGYYLVSAFDPQNKWNLWWKKYITQLQLVRVLPGFGFRSSEQMELVVEEVHHSATTGLETYLKFQFIICGIHCTIQLCSSNCKYPQFMLYFGLSQDIFMFFLFFDFYKKTYWSKGGAPPPPPEENYLKAENKVALIKETTMEKDMQETAVNAAKEGLEKYNIEREVAGHVKQHFDNTYGPYWQCTVGRNFGSYVSYDDFYTYFYLGKVAILLLQWFSGDPIRFTCMEVDYSDTPLGRSRAGAVWLFFFSRVLDLVDTKDSQVTFLHVYHHTAVVMFAWLAVKFVPGGHGVFFGTINCFIHVVMYSYYSLTLYNPEYKNVWWKKYLTQIQMMQFVAVGLHAILALLTPNCNYPKSLIIIALPQDIFMFVLFADFYRKTYMKPATSGKASQPIKTKTS
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	415	2.2.26 [Sep-21-2011]
Q1HRV8	358	Elongation of very long c	N/A	N/A	0.387	0.449	0.439	6e-32
Q9JLJ5	279	Elongation of very long c	no	N/A	0.409	0.609	0.4	1e-28
Q9EQC4	312	Elongation of very long c	no	N/A	0.407	0.541	0.395	2e-28
Q9D2Y9	281	Elongation of very long c	no	N/A	0.390	0.576	0.427	3e-28
Q9BW60	279	Elongation of very long c	yes	N/A	0.395	0.587	0.411	4e-28
A0JNC4	281	Elongation of very long c	no	N/A	0.390	0.576	0.416	1e-27
A1L3X0	281	Elongation of very long c	no	N/A	0.310	0.459	0.459	2e-27
Q9GZR5	314	Elongation of very long c	no	N/A	0.380	0.503	0.395	2e-27
D4ADY9	281	Elongation of very long c	no	N/A	0.426	0.629	0.398	2e-27
Q3S8M4	314	Elongation of very long c	no	N/A	0.380	0.503	0.389	1e-26

>sp|Q1HRV8|ELVL1_AEDAE Elongation of very long chain fatty acids protein AAEL008004 OS=Aedes aegypti GN=AAEL008004 PE=2 SV=2

 Score =  138 bits (348), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 76/173 (43%), Positives = 105/173 (60%), Gaps = 12/173 (6%)

Query: 234 WFSGDPIRFTCMEVDYSDTPLGRSRAGAVWLFFFSRVLD-------LVDTKDSQVTFLHV 286
           W +G    F C  VDYS+ P       A W ++FS+  +       ++  K SQV+ LHV
Sbjct: 89  WLTGH-YNFRCQPVDYSNHPKTLRMVHACWWYYFSKFTEFFDTFFFVMRKKTSQVSTLHV 147

Query: 287 YHHTAVVMFAWLAVKFVPGGHGVFFGTINCFIHVVMYSYYSLTLYNPEY-KNVWWKKYLT 345
            HH  + M  W  VKF PGGH  FFG +N F+H+VMY+YY  T   P++ K +WWKKYLT
Sbjct: 148 IHHGCMPMSVWFGVKFTPGGHSTFFGLLNTFVHIVMYTYYLFTAMGPQFQKYLWWKKYLT 207

Query: 346 QIQMMQFVAVGLHAILALLTPNCNYPKSLI-IIALPQDIFMFVLFADFYRKTY 397
            +QM+QFVA+ +HA   LL  +CNYPK+ +  I +   +F+F LF +FY+ TY
Sbjct: 208 SLQMVQFVAIMVHA-FQLLFIDCNYPKAFVWWIGMHAVMFLF-LFNEFYQSTY 258

Could be implicated in synthesis of very long chain fatty acids.
Aedes aegypti (taxid: 7159)
EC: 2EC: .EC: 3EC: .EC: 1EC: .EC: nEC: 8

>sp|Q9JLJ5|ELOV1_MOUSE Elongation of very long chain fatty acids protein 1 OS=Mus musculus GN=Elovl1 PE=2 SV=1

 Score =  127 bits (319), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 74/185 (40%), Positives = 103/185 (55%), Gaps = 15/185 (8%)

Query: 244 CMEVDYSDTPLGRSRAGAVWLFFFSRVLDLVDT-------KDSQVTFLHVYHHTAVVMFA 296
           C  +D+S++P         WLF  S+V++L+DT       KD QVTFLHV+HH+ +    
Sbjct: 93  CDPIDFSNSPEALRMVRVAWLFMLSKVIELMDTVIFILRKKDGQVTFLHVFHHSVLPWSW 152

Query: 297 WLAVKFVPGGHGVFFGTINCFIHVVMYSYYSLTLYNPEYKN-VWWKKYLTQIQMMQFVAV 355
           W  +K  PGG G F   IN  +HVVMY YY L+   P  +  +WWKK++T IQ++QFV V
Sbjct: 153 WWGIKIAPGGMGSFHAMINSSVHVVMYLYYGLSALGPVAQPYLWWKKHMTAIQLIQFVLV 212

Query: 356 GLHAILALLTPNCNYPKSLII--IALPQDIFMFVLFADFYRKTYMKPATSGKASQ----P 409
            LH       P+CNY   +II  I +   IF F+LF++F+  +Y K     +A Q    P
Sbjct: 213 SLHISQYYFMPSCNYQYPIIIHLIWMYGTIF-FILFSNFWYHSYTKGKRLPRAVQQNGAP 271

Query: 410 IKTKT 414
             TK 
Sbjct: 272 ATTKV 276

Involved in the biosynthesis of C26 fatty acids and sphingolipids. Condensing enzyme that catalyzes the synthesis of both saturated and monounsaturated very long chain fatty acids. Exhibits activity toward saturated C18 to C26 acyl-CoA substrates, with the highest activity towards C22:0 acyl-CoA. Important for saturated C24:0 and monounsaturated C24:1 sphingolipid synthesis. Important for sphingolipid biosynthesis.

Mus musculus (taxid: 10090)

EC: 2

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: n

EC: 8

>sp|Q9EQC4|ELOV4_MOUSE Elongation of very long chain fatty acids protein 4 OS=Mus musculus GN=Elovl4 PE=1 SV=2

 Score =  127 bits (318), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 72/182 (39%), Positives = 105/182 (57%), Gaps = 13/182 (7%)

Query: 242 FTCMEVDYSDTPLGRSRAGAVWLFFFSRVLDLVDT-------KDSQVTFLHVYHHTAVVM 294
           + C  VDYS+       AGA+W +F S+ ++ +DT       K++QV+FLHVYHH  +  
Sbjct: 108 YICQSVDYSNDVNEVRIAGALWWYFVSKGVEYLDTVFFILRKKNNQVSFLHVYHHCTMFT 167

Query: 295 FAWLAVKFVPGGHGVFFGTINCFIHVVMYSYYSLTLYNPEY-KNVWWKKYLTQIQMMQFV 353
             W+ +K+V GG   F   +N FIHV+MYSYY LT + P   K +WWK+YLT +Q++QF 
Sbjct: 168 LWWIGIKWVAGGQAFFGAQMNSFIHVIMYSYYGLTAFGPWIQKYLWWKRYLTMLQLVQFH 227

Query: 354 AVGLHAILALLTPNCNYPKSLIIIALPQDIFMFVLFADFYRKTYMKPATSGKASQPIKTK 413
               H  L+L T +C +PK +    +   I    LF +FY +TY +P    K S+  KT 
Sbjct: 228 VTIGHTALSLYT-DCPFPKWMHWALIAYAISFIFLFLNFYTRTYNEP----KQSKTGKTA 282

Query: 414 TS 415
           T+
Sbjct: 283 TN 284

Condensing enzyme that elongates saturated and monounsaturated very long chain fatty acids (VLCFAs) (By similarity). Seems to represent a photoreceptor-specific component of the fatty acid elongation system residing on the endoplasmic reticulum. May play a critical role in early brain and skin development.

Mus musculus (taxid: 10090)

EC: 2

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: n

EC: 8

>sp|Q9D2Y9|ELOV7_MOUSE Elongation of very long chain fatty acids protein 7 OS=Mus musculus GN=Elovl7 PE=2 SV=1

 Score =  126 bits (317), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 74/173 (42%), Positives = 97/173 (56%), Gaps = 11/173 (6%)

Query: 237 GDPIRFTCMEVDYSDTPLGRSRAGAVWLFFFSRVLDLVDT-------KDSQVTFLHVYHH 289
           G    F C  VDYS +P         WL++FS+ ++L+DT       K+SQVTFLHV+HH
Sbjct: 92  GTGYSFRCDIVDYSQSPRAMRMVHTCWLYYFSKFIELLDTIFFVLRKKNSQVTFLHVFHH 151

Query: 290 TAVVMFAWLAVKFVPGGHGVFFGTINCFIHVVMYSYYSLTLYNPEY-KNVWWKKYLTQIQ 348
           T +    W  VKF  GG G F   +N  +HVVMYSYY L    P Y K +WWKK+LT +Q
Sbjct: 152 TIMPWTWWFGVKFAAGGLGTFHAFLNTAVHVVMYSYYGLCAMGPAYQKYLWWKKHLTSLQ 211

Query: 349 MMQFVAVGLHAILALLTPNCN--YPKSLIIIALPQDIFMFVLFADFYRKTYMK 399
           ++QFV V +H        +CN  YP  L II     IF+ +LF  F+ + Y K
Sbjct: 212 LVQFVLVTIHIGQIFFMEDCNYQYPVFLYIIMSYGCIFL-LLFLHFWYRAYTK 263

Condensing enzyme that catalyzes the synthesis of saturated and polyunsaturated very long chain fatty acids. Highest activity toward C18 acyl-CoAs.

Mus musculus (taxid: 10090)

EC: 2

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: n

EC: 8

>sp|Q9BW60|ELOV1_HUMAN Elongation of very long chain fatty acids protein 1 OS=Homo sapiens GN=ELOVL1 PE=1 SV=1

 Score =  126 bits (316), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 72/175 (41%), Positives = 100/175 (57%), Gaps = 11/175 (6%)

Query: 244 CMEVDYSDTPLGRSRAGAVWLFFFSRVLDLVDT-------KDSQVTFLHVYHHTAVVMFA 296
           C  VDYS++P         WLF FS+ ++L+DT       KD QVTFLHV+HH+ +    
Sbjct: 93  CDPVDYSNSPEALRMVRVAWLFLFSKFIELMDTVIFILRKKDGQVTFLHVFHHSVLPWSW 152

Query: 297 WLAVKFVPGGHGVFFGTINCFIHVVMYSYYSLTLYNPEYKN-VWWKKYLTQIQMMQFVAV 355
           W  VK  PGG G F   IN  +HV+MY YY L+ + P  +  +WWKK++T IQ++QFV V
Sbjct: 153 WWGVKIAPGGMGSFHAMINSSVHVIMYLYYGLSAFGPVAQPYLWWKKHMTAIQLIQFVLV 212

Query: 356 GLHAILALLTPNCNYPKSLII--IALPQDIFMFVLFADFYRKTYMKPATSGKASQ 408
            LH        +CNY   +II  I +   IF F+LF++F+  +Y K     +A Q
Sbjct: 213 SLHISQYYFMSSCNYQYPVIIHLIWMYGTIF-FMLFSNFWYHSYTKGKRLPRALQ 266

Condensing enzyme that catalyzes the synthesis of both saturated and monounsaturated very long chain fatty acids. Exhibits activity toward saturated C18 to C26 acyl-CoA substrates, with the highest activity towards C22:0 acyl-CoA. Important for saturated C24:0 and monounsaturated C24:1 sphingolipid synthesis.

Homo sapiens (taxid: 9606)

EC: 2

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: n

EC: 8

>sp|A0JNC4|ELOV7_BOVIN Elongation of very long chain fatty acids protein 7 OS=Bos taurus GN=ELOVL7 PE=2 SV=1

 Score =  124 bits (311), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 72/173 (41%), Positives = 96/173 (55%), Gaps = 11/173 (6%)

Query: 237 GDPIRFTCMEVDYSDTPLGRSRAGAVWLFFFSRVLDLVDT-------KDSQVTFLHVYHH 289
           G    F C  VDYS +P         WL++FS+ ++L+DT       K+SQVTFLHV+HH
Sbjct: 92  GTGYSFRCDIVDYSQSPTALRMVRTCWLYYFSKFIELLDTIFFILRKKNSQVTFLHVFHH 151

Query: 290 TAVVMFAWLAVKFVPGGHGVFFGTINCFIHVVMYSYYSLTLYNPEY-KNVWWKKYLTQIQ 348
           T +    W  VKF  GG G F   +N  +HVVMYSYY L    P+Y K +WWKKYLT +Q
Sbjct: 152 TIMPWTWWFGVKFAAGGLGTFHAFLNTAVHVVMYSYYGLCALGPDYQKYLWWKKYLTSLQ 211

Query: 349 MMQFVAVGLHAILALLTPNCNY--PKSLIIIALPQDIFMFVLFADFYRKTYMK 399
           ++QFV + +H        +C Y  P    II     IF+ +LF  F+ + Y K
Sbjct: 212 LIQFVLITIHISQFFFMEDCKYQFPVFQYIIMSYGCIFL-LLFLHFWYRAYTK 263

Condensing enzyme that catalyzes the synthesis of saturated and polyunsaturated very long chain fatty acids. Highest activity toward C18 acyl-CoAs.

Bos taurus (taxid: 9913)

EC: 2

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: n

EC: 8

>sp|A1L3X0|ELOV7_HUMAN Elongation of very long chain fatty acids protein 7 OS=Homo sapiens GN=ELOVL7 PE=1 SV=1

 Score =  123 bits (309), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 63/137 (45%), Positives = 82/137 (59%), Gaps = 8/137 (5%)

Query: 242 FTCMEVDYSDTPLGRSRAGAVWLFFFSRVLDLVDT-------KDSQVTFLHVYHHTAVVM 294
           F C  VDYS +P     A   WL++FS+ ++L+DT       K+SQVTFLHV+HHT +  
Sbjct: 97  FRCDIVDYSRSPTALRMARTCWLYYFSKFIELLDTIFFVLRKKNSQVTFLHVFHHTIMPW 156

Query: 295 FAWLAVKFVPGGHGVFFGTINCFIHVVMYSYYSLTLYNPEY-KNVWWKKYLTQIQMMQFV 353
             W  VKF  GG G F   +N  +HVVMYSYY L+   P Y K +WWKKYLT +Q++QFV
Sbjct: 157 TWWFGVKFAAGGLGTFHALLNTAVHVVMYSYYGLSALGPAYQKYLWWKKYLTSLQLVQFV 216

Query: 354 AVGLHAILALLTPNCNY 370
            V +H        +C Y
Sbjct: 217 IVAIHISQFFFMEDCKY 233

Condensing enzyme that catalyzes the synthesis of saturated and polyunsaturated very long chain fatty acids. Highest activity toward C18 acyl-CoAs, especially C18:3(n-3) acyl-CoAs and C18:3(n-6)-CoAs. Also active toward C20:4-, C18:0-, C18:1-, C18:2-and C16:0-CoAs, and weakly toward C20:0-CoA. Little or no activity toward C22:0-, C24:0-, or C26:0-CoAs.

Homo sapiens (taxid: 9606)

EC: 2

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: n

EC: 8

>sp|Q9GZR5|ELOV4_HUMAN Elongation of very long chain fatty acids protein 4 OS=Homo sapiens GN=ELOVL4 PE=1 SV=1

 Score =  123 bits (309), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 66/167 (39%), Positives = 97/167 (58%), Gaps = 9/167 (5%)

Query: 242 FTCMEVDYSDTPLGRSRAGAVWLFFFSRVLDLVDT-------KDSQVTFLHVYHHTAVVM 294
           + C  VDYS+       A A+W +F S+ ++ +DT       K++QV+FLHVYHH  +  
Sbjct: 108 YICQSVDYSNNVHEVRIAAALWWYFVSKGVEYLDTVFFILRKKNNQVSFLHVYHHCTMFT 167

Query: 295 FAWLAVKFVPGGHGVFFGTINCFIHVVMYSYYSLTLYNPEY-KNVWWKKYLTQIQMMQFV 353
             W+ +K+V GG   F   +N FIHV+MYSYY LT + P   K +WWK+YLT +Q++QF 
Sbjct: 168 LWWIGIKWVAGGQAFFGAQLNSFIHVIMYSYYGLTAFGPWIQKYLWWKRYLTMLQLIQFH 227

Query: 354 AVGLHAILALLTPNCNYPKSLIIIALPQDIFMFVLFADFYRKTYMKP 400
               H  L+L T +C +PK +    +   I    LF +FY +TY +P
Sbjct: 228 VTIGHTALSLYT-DCPFPKWMHWALIAYAISFIFLFLNFYIRTYKEP 273

Condensing enzyme that elongates saturated and monounsaturated very long chain fatty acids (VLCFAs). Elongates C24:0 and C26:0 acyl-CoAs. Seems to represent a photoreceptor-specific component of the fatty acid elongation system residing on the endoplasmic reticulum. May be implicated in docosahexaenoic acid (DHA) biosynthesis, which requires dietary consumption of the essential alpha-linolenic acid and a subsequent series of three elongation steps. May play a critical role in early brain and skin development.

Homo sapiens (taxid: 9606)

EC: 2

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: n

EC: 8

>sp|D4ADY9|ELOV7_RAT Elongation of very long chain fatty acids protein 7 OS=Rattus norvegicus GN=Elovl7 PE=3 SV=1

 Score =  123 bits (309), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 75/188 (39%), Positives = 99/188 (52%), Gaps = 11/188 (5%)

Query: 237 GDPIRFTCMEVDYSDTPLGRSRAGAVWLFFFSRVLDLVDT-------KDSQVTFLHVYHH 289
           G    F C  VDYS +P         WL++FS+ ++L DT       K+SQVTFLHV+HH
Sbjct: 92  GTGYSFRCDIVDYSQSPRAMRMVHTCWLYYFSKFIELFDTIFFVLRKKNSQVTFLHVFHH 151

Query: 290 TAVVMFAWLAVKFVPGGHGVFFGTINCFIHVVMYSYYSLTLYNPEY-KNVWWKKYLTQIQ 348
           T +    W  VKF  GG G F   +N  +HVVMY YY L    P Y K +WWKK+LT +Q
Sbjct: 152 TIMPWTWWFGVKFAAGGLGTFHALLNTAVHVVMYFYYGLCAMGPAYQKYLWWKKHLTSLQ 211

Query: 349 MMQFVAVGLHAILALLTPNCN--YPKSLIIIALPQDIFMFVLFADFYRKTYMKPATSGKA 406
           ++QFV V +H        +CN  YP  L II     IF+ +LF  F+ + Y K     K 
Sbjct: 212 LVQFVLVTVHIGQIFFMEDCNYQYPVFLYIIMSYGCIFL-LLFLHFWYRAYTKGQRLPKT 270

Query: 407 SQPIKTKT 414
            +    K+
Sbjct: 271 MENGNCKS 278

Condensing enzyme that catalyzes the synthesis of saturated and polyunsaturated very long chain fatty acids. Highest activity toward C18 acyl-CoAs.

Rattus norvegicus (taxid: 10116)

EC: 2

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: n

EC: 8

>sp|Q3S8M4|ELOV4_MACMU Elongation of very long chain fatty acids protein 4 OS=Macaca mulatta GN=ELOVL4 PE=3 SV=1

 Score =  121 bits (303), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 65/167 (38%), Positives = 96/167 (57%), Gaps = 9/167 (5%)

Query: 242 FTCMEVDYSDTPLGRSRAGAVWLFFFSRVLDLVDT-------KDSQVTFLHVYHHTAVVM 294
           + C  VDYS+       A A+W +F S+ ++ +DT       K++QV+FLHVYHH  +  
Sbjct: 108 YICQSVDYSNNVNEVRIAAALWWYFVSKGVEYLDTVFFILRKKNNQVSFLHVYHHCTMFT 167

Query: 295 FAWLAVKFVPGGHGVFFGTINCFIHVVMYSYYSLTLYNPEY-KNVWWKKYLTQIQMMQFV 353
             W+ +K+V GG   F   +N FIHV+MYSYY L  + P   K +WWK+YLT +Q++QF 
Sbjct: 168 LWWIGIKWVAGGQAFFGAQMNSFIHVIMYSYYGLAAFGPWIQKYLWWKRYLTMLQLVQFH 227

Query: 354 AVGLHAILALLTPNCNYPKSLIIIALPQDIFMFVLFADFYRKTYMKP 400
               H  L+L T +C +PK +    +   I    LF +FY +TY +P
Sbjct: 228 VTIGHTALSLYT-DCPFPKWMHWALIAYAISFIFLFLNFYIRTYKEP 273

Condensing enzyme that elongates saturated and monounsaturated very long chain fatty acids (VLCFAs) (By similarity). Seems to represent a photoreceptor-specific component of the fatty acid elongation system residing on the endoplasmic reticulum (By similarity). May play a critical role in early brain and skin development.

Macaca mulatta (taxid: 9544)

EC: 2

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: n

EC: 8

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	415
193709234	266	PREDICTED: elongation of very long chain	0.431	0.672	0.553	7e-53
239789038	266	ACYPI005277 [Acyrthosiphon pisum]	0.431	0.672	0.553	8e-53
239793030	263	ACYPI003344 [Acyrthosiphon pisum]	0.426	0.673	0.510	2e-48
328719203	238	PREDICTED: elongation of very long chain	0.424	0.739	0.513	3e-48
158285959	316	AGAP007264-PA [Anopheles gambiae str. PE	0.409	0.537	0.486	4e-41
312374826	284	hypothetical protein AND_15443 [Anophele	0.402	0.588	0.497	2e-40
157118142	299	elongase, putative [Aedes aegypti] gi|10	0.4	0.555	0.488	1e-39
357601711	226	hypothetical protein KGM_10498 [Danaus p	0.404	0.743	0.430	2e-37
156553608	285	PREDICTED: elongation of very long chain	0.395	0.575	0.445	5e-37
170031014	290	elongation of very long chain fatty acid	0.448	0.641	0.435	3e-36

>gi|193709234|ref|XP_001947312.1| PREDICTED: elongation of very long chain fatty acids protein AAEL008004-like [Acyrthosiphon pisum]

 Score =  214 bits (545), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 104/188 (55%), Positives = 131/188 (69%), Gaps = 9/188 (4%)

Query: 223 YLGKVAILLLQWFSGDPIRFTCMEVDYSDTPLGRSRAGAVWLFFFSRVLDLVDT------ 276
           YL K A  L+ W   D  +  C+E+DYSDT   +    AVW +FFS+VLDL+DT      
Sbjct: 79  YLVKEAFRLI-WLQND-YKINCIEIDYSDTDKAKDIVCAVWTYFFSKVLDLLDTIFFVLR 136

Query: 277 -KDSQVTFLHVYHHTAVVMFAWLAVKFVPGGHGVFFGTINCFIHVVMYSYYSLTLYNPEY 335
            K +QVTFLH+YHHT V+MF+W  +KF PGG  + FGTIN F+HVVMYSYY LT+  PEY
Sbjct: 137 KKQNQVTFLHIYHHTMVLMFSWGIIKFYPGGQIILFGTINAFVHVVMYSYYFLTILKPEY 196

Query: 336 KNVWWKKYLTQIQMMQFVAVGLHAILALLTPNCNYPKSLIIIALPQDIFMFVLFADFYRK 395
           K  WWKKYLTQ+Q++QFV  GLH  + LL   C+YPK ++ +ALPQD+FMFVLF DFY+K
Sbjct: 197 KKAWWKKYLTQLQLIQFVITGLHGCVTLLATGCSYPKFVLALALPQDLFMFVLFWDFYKK 256

Query: 396 TYMKPATS 403
            Y +P   
Sbjct: 257 AYKQPKNK 264

Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|239789038|dbj|BAH71168.1| ACYPI005277 [Acyrthosiphon pisum]

 Score =  214 bits (544), Expect = 8e-53,   Method: Compositional matrix adjust.
 Identities = 104/188 (55%), Positives = 131/188 (69%), Gaps = 9/188 (4%)

Query: 223 YLGKVAILLLQWFSGDPIRFTCMEVDYSDTPLGRSRAGAVWLFFFSRVLDLVDT------ 276
           YL K A  L+ W   D  +  C+E+DYSDT   +    AVW +FFS+VLDL+DT      
Sbjct: 79  YLVKEAFRLI-WLQND-YKINCIEIDYSDTDKAKDIVCAVWTYFFSKVLDLLDTIFFVLR 136

Query: 277 -KDSQVTFLHVYHHTAVVMFAWLAVKFVPGGHGVFFGTINCFIHVVMYSYYSLTLYNPEY 335
            K +QVTFLH+YHHT V+MF+W  +KF PGG  + FGTIN F+HVVMYSYY LT+  PEY
Sbjct: 137 KKQNQVTFLHIYHHTMVLMFSWGIIKFYPGGQIILFGTINAFVHVVMYSYYFLTILKPEY 196

Query: 336 KNVWWKKYLTQIQMMQFVAVGLHAILALLTPNCNYPKSLIIIALPQDIFMFVLFADFYRK 395
           K  WWKKYLTQ+Q++QFV  GLH  + LL   C+YPK ++ +ALPQD+FMFVLF DFY+K
Sbjct: 197 KKAWWKKYLTQLQLIQFVITGLHGCVTLLATGCSYPKFVLALALPQDLFMFVLFWDFYKK 256

Query: 396 TYMKPATS 403
            Y +P   
Sbjct: 257 AYKQPKNK 264

Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|239793030|dbj|BAH72780.1| ACYPI003344 [Acyrthosiphon pisum]

 Score =  199 bits (506), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 95/186 (51%), Positives = 123/186 (66%), Gaps = 9/186 (4%)

Query: 222 FYLGKVAILLLQWFSGDPIRFTCMEVDYSDTPLGRSRAGAVWLFFFSRVLDLVDT----- 276
            YL K A  L+ W   D  RF C+E    D  +   +   VWLF  S+ +DL+DT     
Sbjct: 75  LYLVKEAFRLV-WLRDD-YRFFCVERSKDDPDIASQQIYTVWLFLISKCMDLLDTVFFIL 132

Query: 277 --KDSQVTFLHVYHHTAVVMFAWLAVKFVPGGHGVFFGTINCFIHVVMYSYYSLTLYNPE 334
             K SQ+TFLHVYHHT VV   W    F PGG   FFGTIN F+HV+MY+YY LT+ +PE
Sbjct: 133 RKKQSQITFLHVYHHTLVVTLGWYLTNFYPGGQAAFFGTINAFVHVIMYTYYLLTVISPE 192

Query: 335 YKNVWWKKYLTQIQMMQFVAVGLHAILALLTPNCNYPKSLIIIALPQDIFMFVLFADFYR 394
           YK  WWKKYLT IQ++QFV  GLH  + L  P+C++P+ ++++A+PQDIFMF+LF DFY+
Sbjct: 193 YKKAWWKKYLTTIQLVQFVITGLHGFITLFEPDCDFPRIIMLLAIPQDIFMFILFWDFYK 252

Query: 395 KTYMKP 400
           K Y+KP
Sbjct: 253 KAYIKP 258

Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|328719203|ref|XP_001947506.2| PREDICTED: elongation of very long chain fatty acids protein 1-like [Acyrthosiphon pisum]

 Score =  199 bits (505), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 95/185 (51%), Positives = 123/185 (66%), Gaps = 9/185 (4%)

Query: 223 YLGKVAILLLQWFSGDPIRFTCMEVDYSDTPLGRSRAGAVWLFFFSRVLDLVDT------ 276
           YL K A  L+ W   D  RF C+E    D  +   +   VWLF  S+ +DL+DT      
Sbjct: 51  YLVKEAFRLV-WLRDD-YRFFCVERSKDDPDIASQQIYTVWLFLISKCMDLLDTVFFILR 108

Query: 277 -KDSQVTFLHVYHHTAVVMFAWLAVKFVPGGHGVFFGTINCFIHVVMYSYYSLTLYNPEY 335
            K SQ+TFLHVYHHT VV   W    F PGG   FFGTIN F+HV+MY+YY LT+ +PEY
Sbjct: 109 KKQSQITFLHVYHHTLVVTLGWYLTNFYPGGQAAFFGTINAFVHVIMYTYYLLTVISPEY 168

Query: 336 KNVWWKKYLTQIQMMQFVAVGLHAILALLTPNCNYPKSLIIIALPQDIFMFVLFADFYRK 395
           K  WWKKYLT IQ++QFV  GLH  + L  P+C++P+ ++++A+PQDIFMF+LF DFY+K
Sbjct: 169 KKAWWKKYLTTIQLVQFVITGLHGFITLFEPDCDFPRIIMLLAIPQDIFMFILFWDFYKK 228

Query: 396 TYMKP 400
            Y+KP
Sbjct: 229 AYIKP 233

Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|158285959|ref|XP_564957.3| AGAP007264-PA [Anopheles gambiae str. PEST] gi|157020240|gb|EAL41836.3| AGAP007264-PA [Anopheles gambiae str. PEST]

 Score =  175 bits (443), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 88/181 (48%), Positives = 119/181 (65%), Gaps = 11/181 (6%)

Query: 242 FTCMEVDYSDTPLGRSRAGAVWLFFFSRVLDLVDT-------KDSQVTFLHVYHHTAVVM 294
           F C  VDYS T +  + A   + +F  +VLDL+DT       K +QV+FLHVYHHT +VM
Sbjct: 95  FLCQPVDYSPTEIPIAIARRCYYYFLVKVLDLLDTIFFVLRKKQNQVSFLHVYHHTGMVM 154

Query: 295 FAWLAVKFVPGGHGVFFGTINCFIHVVMYSYYSLTLYNPEYK-NVWWKKYLTQIQMMQFV 353
             W  VK+ PGGHGVF G IN F+HVVMY+YY LT  NP+YK N+WWKKY+TQ+Q++QF 
Sbjct: 155 LVWSGVKWFPGGHGVFMGFINSFVHVVMYAYYFLTSANPKYKNNLWWKKYITQLQIIQFG 214

Query: 354 AVGLHAILALLTPNCNYPKSLIIIALPQDIFMFVLFADFYRKTYMK---PATSGKASQPI 410
            + L   + L  PNC +PK  + + LPQ++FMF LF DFY + Y+K   P  + + S  +
Sbjct: 215 MIFLQWFVLLFQPNCTFPKWPLFVILPQNLFMFCLFLDFYYQAYIKKKPPTVAARRSAEL 274

Query: 411 K 411
           +
Sbjct: 275 Q 275

Source: Anopheles gambiae str. PEST

Species: Anopheles gambiae

Genus: Anopheles

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|312374826|gb|EFR22304.1| hypothetical protein AND_15443 [Anopheles darlingi]

 Score =  172 bits (437), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 87/175 (49%), Positives = 116/175 (66%), Gaps = 8/175 (4%)

Query: 242 FTCMEVDYSDTPLGRSRAGAVWLFFFSRVLDLVDT-------KDSQVTFLHVYHHTAVVM 294
           F C  VDY+ T +    A   + +F  +VLDL+DT       K +QV+FLHVYHHT +VM
Sbjct: 88  FLCQPVDYTPTEVPTMIARRCYYYFLVKVLDLLDTIFFVLRKKQNQVSFLHVYHHTGMVM 147

Query: 295 FAWLAVKFVPGGHGVFFGTINCFIHVVMYSYYSLTLYNPEYK-NVWWKKYLTQIQMMQFV 353
             W  VK+ PGGHGVF G IN F+HVVMY YY LT  +P+YK N+WWKKY+TQ+Q++QF 
Sbjct: 148 LIWSGVKWFPGGHGVFMGFINSFVHVVMYFYYFLTSVSPKYKGNLWWKKYITQLQIIQFG 207

Query: 354 AVGLHAILALLTPNCNYPKSLIIIALPQDIFMFVLFADFYRKTYMKPATSGKASQ 408
            + L   + L  PNC +PK  + + LPQ++FMF LF DFY + Y+K A +  A+Q
Sbjct: 208 MIFLQWFVLLFQPNCTFPKWPLFVILPQNLFMFCLFLDFYYQAYIKKAPTKVAAQ 262

Source: Anopheles darlingi

Species: Anopheles darlingi

Genus: Anopheles

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|157118142|ref|XP_001659028.1| elongase, putative [Aedes aegypti] gi|108875796|gb|EAT40021.1| AAEL008219-PA [Aedes aegypti]

 Score =  170 bits (430), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 86/176 (48%), Positives = 118/176 (67%), Gaps = 10/176 (5%)

Query: 244 CMEVDYSDTPLGRSRAGAVWLFFFSRVLDLVDT-------KDSQVTFLHVYHHTAVVMFA 296
           C  VDYS   +  +     +++F  +V+DL+DT       K +QV+FLHVYHHT +VM +
Sbjct: 97  CQPVDYSTEGVPFAITRRAYIYFLVKVIDLLDTVFFVLRKKQNQVSFLHVYHHTGMVMLS 156

Query: 297 WLAVKFVPGGHGVFFGTINCFIHVVMYSYYSLTLYNPEYK-NVWWKKYLTQIQMMQFVAV 355
           W  VK+ PGGH VF G IN F+HVVMY YY LT  +P+YK NVWWKK++TQ+Q++QF A+
Sbjct: 157 WSGVKWFPGGHSVFMGFINSFVHVVMYYYYFLTSISPKYKANVWWKKHITQLQIIQFGAI 216

Query: 356 GLHAILALLTPNCNYPKSLIIIALPQDIFMFVLFADFYRKTYM--KPATSGKASQP 409
            L   + +  PNCN+PK  + + LPQ++FMFVLF DFY K Y+  KP+     S+P
Sbjct: 217 FLQWFVLVFQPNCNFPKWPLFVILPQNLFMFVLFLDFYYKAYIKKKPSKPTVESKP 272

Source: Aedes aegypti

Species: Aedes aegypti

Genus: Aedes

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|357601711|gb|EHJ63128.1| hypothetical protein KGM_10498 [Danaus plexippus]

 Score =  163 bits (412), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 77/179 (43%), Positives = 121/179 (67%), Gaps = 11/179 (6%)

Query: 241 RFTCMEVDYSDTPLGRSRAGAVWLFFFSRVLDLVDT-------KDSQVTFLHVYHHTAVV 293
            F C  VDYSDTP  +  A AVW +FF+++++L+DT       K+ Q+TFLH+YHHT + 
Sbjct: 41  NFDCQPVDYSDTPKAKRMAAAVWWYFFAKIVELLDTVFFVLRKKNRQITFLHLYHHTMMP 100

Query: 294 MFAWLAVKFVPGGHGVFFGTINCFIHVVMYSYYSLTLYNPEY-KNVWWKKYLTQIQMMQF 352
           + AW+ V+F+PGGHG   G IN FIH+VMY+YY ++   P+Y K +WWKK+LT +Q++QF
Sbjct: 101 ICAWIGVRFLPGGHGTLLGVINSFIHIVMYTYYLISGLGPQYQKYLWWKKHLTSMQLVQF 160

Query: 353 VAVGLHAILALLTPNCNYPKSL-IIIALPQDIFMFVLFADFYRKTYMKPATSGKASQPI 410
           V +  H   +++  +CNYPK++  ++AL   +F++ +F +FY + Y+KP    K +  +
Sbjct: 161 VIIFYHN-FSVMFCDCNYPKTINFLLALNAGLFLY-MFGNFYYRNYIKPRDGSKPANGV 217

Source: Danaus plexippus

Species: Danaus plexippus

Genus: Danaus

Family: Nymphalidae

Order: Lepidoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|156553608|ref|XP_001599867.1| PREDICTED: elongation of very long chain fatty acids protein 7-like [Nasonia vitripennis]

 Score =  161 bits (408), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 77/173 (44%), Positives = 114/173 (65%), Gaps = 9/173 (5%)

Query: 242 FTCMEVDYSDTPLGRSRAGAVWLFFFSRVLDLVDT-------KDSQVTFLHVYHHTAVVM 294
           ++C  VDYSDTP     AG V+L+F  +++DL+DT       K +Q++FLHVYHHT +VM
Sbjct: 96  YSCEPVDYSDTPRAVEIAGTVYLYFIVKIIDLLDTVFFVLRKKQNQISFLHVYHHTGMVM 155

Query: 295 FAWLAVKFVPGGHGVFFGTINCFIHVVMYSYYSLTLYNPEYKNVWWKKYLTQIQMMQFVA 354
            +W  VK++ GGH  F G IN F+HV+MY++Y ++ +  +  N WWKKY+TQ+Q++QF  
Sbjct: 156 GSWGGVKYLAGGHATFLGLINSFVHVIMYTHYLVSSF--KIANPWWKKYITQLQLIQFFL 213

Query: 355 VGLHAILALLTPNCNYPKSLIIIALPQDIFMFVLFADFYRKTYMKPATSGKAS 407
           + +H    L T +C +P+    I +PQ+IFM VLF DFY +TY+K     K +
Sbjct: 214 ILVHFSQLLWTEDCGFPRWPAAIFIPQNIFMIVLFGDFYYQTYVKKKPQKKVA 266

Source: Nasonia vitripennis

Species: Nasonia vitripennis

Genus: Nasonia

Family: Pteromalidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|170031014|ref|XP_001843382.1| elongation of very long chain fatty acids protein 4 [Culex quinquefasciatus] gi|167868862|gb|EDS32245.1| elongation of very long chain fatty acids protein 4 [Culex quinquefasciatus]

 Score =  159 bits (401), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 87/200 (43%), Positives = 121/200 (60%), Gaps = 14/200 (7%)

Query: 213 VSYDDFYTYFYLGKVAILLLQWFSGDPI------RFTCMEVDYSDTPLGRSRAGAVWLFF 266
           +  D+F   + L +V + L  +  G  +       F C  VDYSD  +    A    ++F
Sbjct: 60  IKIDNFIKVYNLAQVFVCLFLFIEGWRLGYLRGYSFLCQPVDYSDDEVPLKIARRCHIYF 119

Query: 267 FSRVLDLVDT-------KDSQVTFLHVYHHTAVVMFAWLAVKFVPGGHGVFFGTINCFIH 319
             +VLDL+DT       K +QV+FLHVYHHT +VM  W  VK+  GGHGVF G +N FIH
Sbjct: 120 LVKVLDLMDTVFFVLRKKQNQVSFLHVYHHTGMVMLTWSGVKWFAGGHGVFMGFLNSFIH 179

Query: 320 VVMYSYYSLTLYNPEYK-NVWWKKYLTQIQMMQFVAVGLHAILALLTPNCNYPKSLIIIA 378
           VVMY YY LT  + +YK NVWWKK++TQ+Q++QF  + L   + +  PNC +PK  + + 
Sbjct: 180 VVMYFYYFLTSVSDKYKGNVWWKKHITQLQIIQFGLIFLQWFVLVFQPNCAFPKWPLFVL 239

Query: 379 LPQDIFMFVLFADFYRKTYM 398
           LPQ++FMF+LF DFY   Y+
Sbjct: 240 LPQNLFMFMLFLDFYYHAYI 259

Source: Culex quinquefasciatus

Species: Culex quinquefasciatus

Genus: Culex

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	415
FB|FBgn0038986	295	CG5278 [Drosophila melanogaste	0.412	0.579	0.405	4.3e-38
UNIPROTKB|Q1HRV8	358	AAEL008004 "Elongation of very	0.387	0.449	0.450	1.3e-36
FB|FBgn0051522	365	CG31522 [Drosophila melanogast	0.390	0.443	0.430	3.5e-36
ZFIN|ZDB-GENE-050522-453	264	zgc:112263 "zgc:112263" [Danio	0.402	0.632	0.398	3.1e-35
ZFIN|ZDB-GENE-040426-2755	320	elovl1b "elongation of very lo	0.440	0.571	0.384	5.6e-34
FB|FBgn0038983	277	CG5326 [Drosophila melanogaste	0.4	0.599	0.380	5.8e-34
ZFIN|ZDB-GENE-060929-240	268	zgc:153394 "zgc:153394" [Danio	0.380	0.589	0.401	2e-33
FB|FBgn0260942	322	bond "james bond" [Drosophila	0.334	0.431	0.449	2.5e-33
ZFIN|ZDB-GENE-030131-5485	282	elovl7b "ELOVL family member 7	0.402	0.592	0.422	8.5e-33
ZFIN|ZDB-GENE-030131-6149	289	elovl7a "ELOVL family member 7	0.428	0.615	0.389	1.1e-32

FB|FBgn0038986 CG5278 [Drosophila melanogaster (taxid:7227)]

 Score = 408 (148.7 bits), Expect = 4.3e-38, P = 4.3e-38
 Identities = 75/185 (40%), Positives = 113/185 (61%)

Query:   229 ILLLQWFSGDPIRFTCMEVDYSDTPLGRSRAGAVWLFFFSRVLDLVDT-------KDSQV 281
             +++ Q++S     + C  VD+S TP     A  V++++ +++ +L+DT        D QV
Sbjct:    86 VVIWQYYS-----WRCQPVDWSRTPKAYREARVVYVYYLAKITELLDTIFFVLRKNDRQV 140

Query:   282 TFLHVYHHTAVVMFAWLAVKFVPGGHGVFFGTINCFIHVVMYSYYSLTLYNPEY-KNVWW 340
             TFLHVYHHT + M +W   K+ PGGHG F G IN F+H++MYSYY L+ + P+  K +WW
Sbjct:   141 TFLHVYHHTVMPMISWGTSKYYPGGHGTFIGWINSFVHIIMYSYYFLSAFGPQMQKYLWW 200

Query:   341 KKYLTQIQMMQFVAVGLHAILALLTPNCNYPKSLIIIALPQDIFMFVLFADFYRKTYMKP 400
             KKY+T +QM+QF    +H    L T +C YP+  +   LP  +F + LF DFY+K+Y K 
Sbjct:   201 KKYITNLQMIQFCCAFIHQTQLLYT-DCGYPRWSVCFTLPNAVFFYFLFNDFYQKSYKKK 259

Query:   401 ATSGK 405
               + K
Sbjct:   260 QAAAK 264

GO:0016021 "integral to membrane" evidence=IEA

UNIPROTKB|Q1HRV8 AAEL008004 "Elongation of very long chain fatty acids protein AAEL008004" [Aedes aegypti (taxid:7159)]

 Score = 394 (143.8 bits), Expect = 1.3e-36, P = 1.3e-36
 Identities = 78/173 (45%), Positives = 105/173 (60%)

Query:   234 WFSGDPIRFTCMEVDYSDTPLGRSRAGAVWLFFFSRVLDLVDT-------KDSQVTFLHV 286
             W +G    F C  VDYS+ P       A W ++FS+  +  DT       K SQV+ LHV
Sbjct:    89 WLTGH-YNFRCQPVDYSNHPKTLRMVHACWWYYFSKFTEFFDTFFFVMRKKTSQVSTLHV 147

Query:   287 YHHTAVVMFAWLAVKFVPGGHGVFFGTINCFIHVVMYSYYSLTLYNPEY-KNVWWKKYLT 345
              HH  + M  W  VKF PGGH  FFG +N F+H+VMY+YY  T   P++ K +WWKKYLT
Sbjct:   148 IHHGCMPMSVWFGVKFTPGGHSTFFGLLNTFVHIVMYTYYLFTAMGPQFQKYLWWKKYLT 207

Query:   346 QIQMMQFVAVGLHAILALLTPNCNYPKSLII-IALPQDIFMFVLFADFYRKTY 397
              +QM+QFVA+ +HA   LL  +CNYPK+ +  I +   +F+F LF +FY+ TY
Sbjct:   208 SLQMVQFVAIMVHAF-QLLFIDCNYPKAFVWWIGMHAVMFLF-LFNEFYQSTY 258

GO:0030176 "integral to endoplasmic reticulum membrane" evidence=ISS

FB|FBgn0051522 CG31522 [Drosophila melanogaster (taxid:7227)]

 Score = 390 (142.3 bits), Expect = 3.5e-36, P = 3.5e-36
 Identities = 74/172 (43%), Positives = 100/172 (58%)

Query:   234 WFSGDPIRFTCMEVDYSDTPLGRSRAGAVWLFFFSRVLDLVDT-------KDSQVTFLHV 286
             W +G    F C  VDYS+ P       A W ++FS+  + +DT       K SQVT LHV
Sbjct:    89 WLTGH-YSFRCQPVDYSNNPRTLRMVHACWWYYFSKFTEFMDTIFFVLRKKSSQVTTLHV 147

Query:   287 YHHTAVVMFAWLAVKFVPGGHGVFFGTINCFIHVVMYSYYSLTLYNPEY-KNVWWKKYLT 345
              HH  + M  W  VKF PGGH  FFG +N F+H+VMY+YY  +   P+Y K +WWKKYLT
Sbjct:   148 IHHGCMPMSVWFGVKFTPGGHSTFFGLLNTFVHIVMYTYYMFSAMGPQYQKYLWWKKYLT 207

Query:   346 QIQMMQFVAVGLHAILALLTPNCNYPKSLIIIALPQDIFMFVLFADFYRKTY 397
              +QM+QF+ + +HA   LL  +CNYPK+ +       +  F LF +FY+  Y
Sbjct:   208 TLQMVQFILIMVHAF-QLLFIDCNYPKAFVWWIGMHAVMFFFLFNEFYKAAY 258

GO:0000038 "very long-chain fatty acid metabolic process" evidence=ISS

GO:0006633 "fatty acid biosynthetic process" evidence=ISS

GO:0016021 "integral to membrane" evidence=IEA

ZFIN|ZDB-GENE-050522-453 zgc:112263 "zgc:112263" [Danio rerio (taxid:7955)]

 Score = 381 (139.2 bits), Expect = 3.1e-35, P = 3.1e-35
 Identities = 71/178 (39%), Positives = 105/178 (58%)

Query:   230 LLLQWFSGDPIRFTCMEVDYSDTPLGRSRAGAVWLFFFSRVLDLVDT-------KDSQVT 282
             L+  W +     + C  VDYS +PLG   A   W FFFS+V++L DT       K+SQ+T
Sbjct:    84 LVTSWLAN--YSYLCQPVDYSTSPLGMRMANVCWWFFFSKVIELSDTVFFILRKKNSQLT 141

Query:   283 FLHVYHHTAVVMFAWLAVKFVPGGHGVFFGTINCFIHVVMYSYYSLTLYNPEY-KNVWWK 341
             FLHVYHH  ++   W  VK+V GG   F G +N F+H+ MYSYY L    P   K +WWK
Sbjct:   142 FLHVYHHGTMIFNWWAGVKYVAGGQSFFIGLLNTFVHIWMYSYYGLAALGPHLQKYLWWK 201

Query:   342 KYLTQIQMMQFVAVGLHAILALLTPNCNYPKSLIIIALPQDIFMFVLFADFYRKTYMK 399
             +YLT +Q++QF+ + +H    L T  C +P S+  +     + + +LF++FY ++Y+K
Sbjct:   202 RYLTSLQLVQFILLTVHTGYNLFT-ECEFPDSMNAVVFAYCVSLIILFSNFYYQSYIK 258

GO:0016021 "integral to membrane" evidence=IEA

GO:0008150 "biological_process" evidence=ND

GO:0003674 "molecular_function" evidence=ND

ZFIN|ZDB-GENE-040426-2755 elovl1b "elongation of very long chain fatty acids (FEN1/Elo2, SUR4/Elo3, yeast)-like 1b" [Danio rerio (taxid:7955)]

 Score = 345 (126.5 bits), Expect = 5.6e-34, Sum P(2) = 5.6e-34
 Identities = 75/195 (38%), Positives = 109/195 (55%)

Query:   230 LLLQWFSGDPIRFTCMEVDYSDTPLGRSRAGAVWLFFFSRVLDLVDT-------KDSQVT 282
             L+  W +G   R  C   DYS++P G   A   WLF FS+ ++L+DT       K SQ+T
Sbjct:    86 LMSGWATGYTWR--CDPCDYSNSPQGLRMARVAWLFLFSKFIELMDTVFFVLRKKHSQIT 143

Query:   283 FLHVYHHTAVVMFAWLAVKFVPGGHGVFFGTINCFIHVVMYSYYSLTLYNPEY-KNVWWK 341
             FLH++HH+ +    W  V  VPGG G F   +N  +HV+MY YY L+   P + K +WWK
Sbjct:   144 FLHIFHHSFMPWTWWWGVSIVPGGMGSFHAMVNSCVHVIMYFYYGLSAAGPRFQKFLWWK 203

Query:   342 KYLTQIQMMQFVAVGLHAILALLTPNCNYPKSLII-IALPQDIFMFVLFADFYRKTYMKP 400
             KY+T IQ+ QFV V LH        +C++   +II +      F FVLF++F+ + Y+K 
Sbjct:   204 KYMTAIQLTQFVLVSLHVSQWYFMESCDFQVPVIIHLIWLYGTFFFVLFSNFWYQAYIKG 263

Query:   401 ATSGKASQPIKTKTS 415
                 K +Q   T+T+
Sbjct:   264 KRLPKNTQET-TETN 277

GO:0016021 "integral to membrane" evidence=IEA

GO:0008150 "biological_process" evidence=ND

GO:0003674 "molecular_function" evidence=ND

FB|FBgn0038983 CG5326 [Drosophila melanogaster (taxid:7227)]

 Score = 369 (135.0 bits), Expect = 5.8e-34, P = 5.8e-34
 Identities = 67/176 (38%), Positives = 106/176 (60%)

Query:   237 GDPIRFTCMEVDYSDTPLGRSRAGAVWLFFFSRVLDLVDT-------KDSQVTFLHVYHH 289
             G    F C  V Y   P+    A AVWL++ +++ +L+DT       K  Q++FLH+YHH
Sbjct:    94 GGHYNFKCQPVTYESDPISMRMARAVWLYYIAKITELLDTVFFVLRKKQRQISFLHLYHH 153

Query:   290 TAVVMFAWLAVKFVPGGHGVFFGTINCFIHVVMYSYYSLTLYNPEY-KNVWWKKYLTQIQ 348
             T + + A++ VK+  GGHG   G IN FIH++MY+YY L+   P+  K +WWKKY+T +Q
Sbjct:   154 TLMPVCAFIGVKYFAGGHGTLLGFINSFIHIIMYAYYLLSAMGPKVQKYLWWKKYITILQ 213

Query:   349 MMQFVAVGLHAILALLTPNCNYPKSLI-IIALPQDIFMFVLFADFYRKTYMKPATS 403
             ++QF+ + +H +     PNCN+PKS+  ++     +F + +F+ FY   Y K A +
Sbjct:   214 IVQFLIIFVHTLQIQFQPNCNFPKSIAALLTFNAGLFTY-MFSAFYVANYKKEAAA 268

GO:0016021 "integral to membrane" evidence=IEA

GO:0022008 "neurogenesis" evidence=IMP

ZFIN|ZDB-GENE-060929-240 zgc:153394 "zgc:153394" [Danio rerio (taxid:7955)]

 Score = 364 (133.2 bits), Expect = 2.0e-33, P = 2.0e-33
 Identities = 67/167 (40%), Positives = 100/167 (59%)

Query:   244 CMEVDYSDTPLGRSRAGAVWLFFFSRVLDLVDT-------KDSQVTFLHVYHHTAVVMFA 296
             C  VDY++ PL    A   W F+FS+V++L DT       K++Q+TFLHVYHH  ++   
Sbjct:   100 CQPVDYTENPLPMRMARVCWWFYFSKVIELADTMFFILRKKNNQLTFLHVYHHGTMIFNW 159

Query:   297 WLAVKFVPGGHGVFFGTINCFIHVVMYSYYSLTLYNPEY-KNVWWKKYLTQIQMMQFVAV 355
             W  VK+V GG     G IN F+HVVMY YY L    P+  K +WWK+YLT +Q++QF  V
Sbjct:   160 WAGVKYVAGGQSFLIGLINSFVHVVMYMYYGLAALGPQMQKYLWWKRYLTSLQLLQFFIV 219

Query:   356 GLHAILALLTPNCNYPKSLIIIALPQDIFMFVLFADFYRKTYMKPAT 402
              +H    L   +C++P S+ ++ L   + +  LF++FY ++Y+   T
Sbjct:   220 TIHTAFNLYA-DCDFPDSMNMVVLGYALSLIALFSNFYYQSYLSKKT 265

GO:0016021 "integral to membrane" evidence=IEA

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

FB|FBgn0260942 bond "james bond" [Drosophila melanogaster (taxid:7227)]

 Score = 363 (132.8 bits), Expect = 2.5e-33, P = 2.5e-33
 Identities = 67/149 (44%), Positives = 96/149 (64%)

Query:   259 AGAVWLFFFSRVLDLVDT-------KDSQVTFLHVYHHTAVVMFAWLAVKFVPGGHGVFF 311
             +GA W +FFS+++DL+DT       KD+QV+FLHVYHHT  V+F+W  +K+ PG  GV  
Sbjct:   113 SGA-WFYFFSKIIDLLDTTFFVLRKKDNQVSFLHVYHHTITVLFSWGYLKYAPGEQGVII 171

Query:   312 GTINCFIHVVMYSYYSLTLYNPEY-KNVWWKKYLTQIQMMQFVAVGLHAILALLTPNCNY 370
             G +N  +H++MY YY +    P+Y K +WWKKY+T IQ++QFV + L  +L +    CN 
Sbjct:   172 GILNSGVHIIMYFYYMVAAMGPQYQKYLWWKKYMTSIQLIQFVLI-LGYMLTVGAKGCNM 230

Query:   371 PKSLIIIALPQDIFMFVLFADFYRKTYMK 399
             PK+L    +   +    LF +FYRKTY K
Sbjct:   231 PKTLTFFFVGNTVIFLYLFGNFYRKTYKK 259

GO:0016021 "integral to membrane" evidence=IEA

GO:0000915 "cytokinesis, actomyosin contractile ring assembly" evidence=IMP

GO:0051225 "spindle assembly" evidence=IMP

GO:0007111 "cytokinesis after meiosis II" evidence=IMP

GO:0007110 "cytokinesis after meiosis I" evidence=IMP

GO:0007112 "male meiosis cytokinesis" evidence=IMP

GO:0000212 "meiotic spindle organization" evidence=IMP

ZFIN|ZDB-GENE-030131-5485 elovl7b "ELOVL family member 7, elongation of long chain fatty acids (yeast) b" [Danio rerio (taxid:7955)]

 Score = 358 (131.1 bits), Expect = 8.5e-33, P = 8.5e-33
 Identities = 76/180 (42%), Positives = 103/180 (57%)

Query:   230 LLLQWFSGDPIRFTCMEVDYSDTPLGRSRAGAVWLFFFSRVLDLVDT-------KDSQVT 282
             L+  W +G   R  C  VDYS +P     A   WL++FS+ ++++DT       K SQV+
Sbjct:    87 LMSGWANGYTYR--CDLVDYSSSPQALRMAWTCWLYYFSKFIEMLDTVFFVLRKKSSQVS 144

Query:   283 FLHVYHHTAVVMFAWLAVKFVPGGHGVFFGTINCFIHVVMYSYYSLTLYNPEY-KNVWWK 341
             FLHVYHH+ +    W  V+F PGG G F   +NC +HV+MYSYY L+   P+Y K +WWK
Sbjct:   145 FLHVYHHSIMPFTWWFGVRFAPGGLGTFHALLNCIVHVIMYSYYLLSALGPKYQKYLWWK 204

Query:   342 KYLTQIQMMQFVAVGLHAILALLTPNCNY--PKSLIIIALPQDIFMFVLFADFYRKTYMK 399
             KY+T IQ++QFV V  H        +C Y  P  L II L   IF+ +LF  FY   Y +
Sbjct:   205 KYMTTIQLVQFVLVTAHIGQFFFMQDCPYQFPVFLYIIGLYGLIFL-LLFLHFYYHAYTR 263

GO:0016021 "integral to membrane" evidence=IEA

GO:0003674 "molecular_function" evidence=ND

ZFIN|ZDB-GENE-030131-6149 elovl7a "ELOVL family member 7, elongation of long chain fatty acids (yeast) a" [Danio rerio (taxid:7955)]

 Score = 357 (130.7 bits), Expect = 1.1e-32, P = 1.1e-32
 Identities = 76/195 (38%), Positives = 109/195 (55%)

Query:   230 LLLQWFSGDPIRFTCMEVDYSDTPLGRSRAGAVWLFFFSRVLDLVDT-------KDSQVT 282
             L+  W +G    F C  VDYS +P     A   WL++FS+ ++++DT       K  Q+T
Sbjct:    88 LMAGWGTG--YTFGCDLVDYSQSPKAMRMASVCWLYYFSKFIEMLDTVFFVLRKKPKQIT 145

Query:   283 FLHVYHHTAVVMFAWLAVKFVPGGHGVFFGTINCFIHVVMYSYYSLTLYNPEYKN-VWWK 341
             FLHV+HH+ +    W  V+F PGG G F   +NC +HV+MY+YY L+   P ++  +WWK
Sbjct:   146 FLHVFHHSIMPFTWWFGVRFSPGGLGTFHALLNCIVHVIMYTYYLLSALGPSFQRFLWWK 205

Query:   342 KYLTQIQMMQFVAVGLHAILALLTPNCNYPKSLI--IIALPQDIFMFVLFADFYRKTYMK 399
             K+LT +Q++QFV V +H        +C YP  L   IIAL   IF+ +LF +F+   Y  
Sbjct:   206 KHLTSLQLIQFVLVTVHISQYFFMKDCPYPYPLFMYIIALYGIIFL-LLFLNFWHHAY-- 262

Query:   400 PATSGKASQPIKTKT 414
               T GK    I  KT
Sbjct:   263 --TKGKRLPKILQKT 275

GO:0016021 "integral to membrane" evidence=IEA

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q22799	DYL1_CAEEL	No assigned EC number	0.5058	0.2024	0.9438	yes	N/A

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	415
pfam01151	244	pfam01151, ELO, GNS1/SUR4 family	2e-49
pfam01221	86	pfam01221, Dynein_light, Dynein light chain type 1	2e-31
PTZ00059	90	PTZ00059, PTZ00059, dynein light chain; Provisiona	3e-27
pfam01151	244	pfam01151, ELO, GNS1/SUR4 family	7e-17
PLN03058	128	PLN03058, PLN03058, dynein light chain type 1 fami	5e-09
PTZ00251	272	PTZ00251, PTZ00251, fatty acid elongase; Provision	3e-05

>gnl|CDD|216332 pfam01151, ELO, GNS1/SUR4 family

 Score =  167 bits (426), Expect = 2e-49
 Identities = 63/178 (35%), Positives = 91/178 (51%), Gaps = 13/178 (7%)

Query: 241 RFTCMEVDYSDTPLGRSRAGAVWLF--FFSRVLDLVDT-------KDSQVTFLHVYHHTA 291
            +  + V YS  P         + +  F S+ L+L+DT       K  Q++FLHVYHH  
Sbjct: 67  LYLALCVCYSFDPGAIRMGLVGFWYWLFLSKFLELLDTVFLVLRKKQRQLSFLHVYHHAT 126

Query: 292 VVMFAWLAVKFVPGGHGVFFGTINCFIHVVMYSYYSLTLYNPEYKNVWWKKYLTQIQMMQ 351
           +++++WL +K+ PGGH  F   +N F+HV+MY YY L         VWWKKY+TQ+Q++Q
Sbjct: 127 MLLYSWLGLKYGPGGHFWFIALLNSFVHVIMYFYYFLAALGARGLPVWWKKYITQLQIIQ 186

Query: 352 FVAVGLHAILALLT---PNCNYPKSL-IIIALPQDIFMFVLFADFYRKTYMKPATSGK 405
           FV    H   AL       C  P    + + L   +    LF +FY K+Y KP    K
Sbjct: 187 FVLGLAHVGYALYNYTKGGCGGPFPKAVRLGLVYYVSYLFLFLNFYIKSYKKPKKKKK 244

Members of this family are involved in long chain fatty acid elongation systems that produce the 26-carbon precursors for ceramide and sphingolipid synthesis. Predicted to be integral membrane proteins, in eukaryotes they are probably located on the endoplasmic reticulum. Yeast ELO3 affects plasma membrane H+-ATPase activity, and may act on a glucose-signaling pathway that controls the expression of several genes that are transcriptionally regulated by glucose such as PMA1. Length = 244

>gnl|CDD|189895 pfam01221, Dynein_light, Dynein light chain type 1

 Score =  114 bits (289), Expect = 2e-31
 Identities = 39/80 (48%), Positives = 59/80 (73%), Gaps = 1/80 (1%)

Query: 153 ALIKETTMEKDMQETAVNAAKEGLEKYNIEREVAGHVKQHFDNTYGPYWQCTVGRNFGSY 212
           A++K   M ++MQE A+  A E LEK+N+E+++A H+K+ FD  YGP W C VG+NFGSY
Sbjct: 3   AVVKNADMPEEMQEDAIECAAEALEKFNVEKDIAAHIKKEFDKKYGPTWHCIVGKNFGSY 62

Query: 213 VSYD-DFYTYFYLGKVAILL 231
           V+++   + YFY+G++A LL
Sbjct: 63  VTHETKHFIYFYIGQLAFLL 82

Length = 86

>gnl|CDD|185421 PTZ00059, PTZ00059, dynein light chain; Provisional

 Score =  103 bits (258), Expect = 3e-27
 Identities = 41/86 (47%), Positives = 63/86 (73%), Gaps = 1/86 (1%)

Query: 149 ENKVALIKETTMEKDMQETAVNAAKEGLEKYNIEREVAGHVKQHFDNTYGPYWQCTVGRN 208
            ++ A++K   M +DMQ+ A++ A + LEK+NIE+++A ++K+ FD  Y P W C VGRN
Sbjct: 3   SDRKAVVKNADMSEDMQQDAIDCANQALEKFNIEKDIAAYIKKEFDKKYNPTWHCIVGRN 62

Query: 209 FGSYVSYD-DFYTYFYLGKVAILLLQ 233
           FGSYV+++   + YFYLG+VAILL +
Sbjct: 63  FGSYVTHETKHFIYFYLGQVAILLFK 88

Length = 90

>gnl|CDD|216332 pfam01151, ELO, GNS1/SUR4 family

 Score = 79.2 bits (196), Expect = 7e-17
 Identities = 36/132 (27%), Positives = 50/132 (37%), Gaps = 40/132 (30%)

Query: 3   GQVAFFGTVNSFVHGVMYGYYLVSAFDPQNKWNLWWKKYITQLQLVRVLPGFGFRSSEQM 62
           G   F   +NSFVH +MY YY ++A   +    +WWKKYITQLQ++              
Sbjct: 141 GHFWFIALLNSFVHVIMYFYYFLAALGARGLP-VWWKKYITQLQII-------------- 185

Query: 63  ELVVEEVHHSATTGLETYLKFQFIICGIHC---TIQLCSSNCKYP-QFMLYFGLSQDIFM 118
                                QF++   H            C  P    +  GL   +  
Sbjct: 186 ---------------------QFVLGLAHVGYALYNYTKGGCGGPFPKAVRLGLVYYVSY 224

Query: 119 FFLFFDFYKKTY 130
            FLF +FY K+Y
Sbjct: 225 LFLFLNFYIKSY 236

Members of this family are involved in long chain fatty acid elongation systems that produce the 26-carbon precursors for ceramide and sphingolipid synthesis. Predicted to be integral membrane proteins, in eukaryotes they are probably located on the endoplasmic reticulum. Yeast ELO3 affects plasma membrane H+-ATPase activity, and may act on a glucose-signaling pathway that controls the expression of several genes that are transcriptionally regulated by glucose such as PMA1. Length = 244

>gnl|CDD|166697 PLN03058, PLN03058, dynein light chain type 1 family protein; Provisional

 Score = 53.8 bits (129), Expect = 5e-09
 Identities = 30/84 (35%), Positives = 50/84 (59%), Gaps = 6/84 (7%)

Query: 155 IKETTMEKDMQETAVNAAKEGLE----KYNIEREVAGHVKQHFDNTYGPYWQCTVGRNFG 210
           ++ + M   +Q  A + A++ L+    K + +R +A  +K+ FD+ YGP W C VG +FG
Sbjct: 38  VRASDMPLVLQNRAFSCARDILDAMPGKLDSKR-LALALKKEFDSAYGPAWHCIVGTSFG 96

Query: 211 SYVSYD-DFYTYFYLGKVAILLLQ 233
           SYV++    + YF + KV ILL +
Sbjct: 97  SYVTHSTGGFLYFSIDKVYILLFK 120

Length = 128

>gnl|CDD|140278 PTZ00251, PTZ00251, fatty acid elongase; Provisional

 Score = 45.2 bits (107), Expect = 3e-05
 Identities = 41/163 (25%), Positives = 76/163 (46%), Gaps = 22/163 (13%)

Query: 261 AVWLFFFSRVLDLVDT-----KDSQVTFLHVYHHTAVVMFAWLAVKFVPGGHGVFF--GT 313
           A+ LF  S+V +  DT        ++ FL  +HH  + ++AW++ +    G  ++     
Sbjct: 114 AMGLFSISKVPEFGDTFFLIMGGKKLPFLSWFHHVTIFLYAWMSYQ---QGSSIWICAAA 170

Query: 314 INCFIHVVMYSYYSLTLYNPEYKNVW--WKKYLTQIQMMQFVA---VGLHAILALLTPNC 368
           +N F+H +MY Y++L+     +K +   +  Y+T +Q+ Q V    V  + I+  LT   
Sbjct: 171 MNYFVHSIMYFYFALS--EAGFKKLVKPFAMYITLLQITQMVGGLFVSGYVIVQKLTKGD 228

Query: 369 NYPKSLIIIALPQD-----IFMFVLFADFYRKTYMKPATSGKA 406
               S   +A  +      IF F LF++ + K Y+ P  +   
Sbjct: 229 PKGCSGTTMATARGQLMIYIFNFYLFSEMFVKGYVLPRKAKAG 271

Length = 272

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	415
KOG3071|consensus	274		100.0
PF01151	250	ELO: GNS1/SUR4 family; InterPro: IPR002076 This gr	100.0
PTZ00251	272	fatty acid elongase; Provisional	100.0
KOG3072|consensus	282		100.0
KOG3430|consensus	90		99.97
PTZ00059	90	dynein light chain; Provisional	99.96
PLN03058	128	dynein light chain type 1 family protein; Provisio	99.96
PF01221	89	Dynein_light: Dynein light chain type 1 ; InterPro	99.95
PF01151	250	ELO: GNS1/SUR4 family; InterPro: IPR002076 This gr	99.89
KOG3071|consensus	274		99.88
PTZ00251	272	fatty acid elongase; Provisional	99.86
KOG3072|consensus	282		99.82
PF04155	76	Ground-like: Ground-like domain; InterPro: IPR0072	93.85

>KOG3071|consensus

Probab=100.00  E-value=7.4e-48  Score=371.69  Aligned_cols=166  Identities=36%  Similarity=0.720  Sum_probs=157.2

Q ss_pred             CcceeeccccCCCCccccchhhHHHHHHHhhhhhhccC-------CCCceeEEEEeccchhhhhhhhhcccccCccceec
Q psy8080         239 PIRFTCMEVDYSDTPLGRSRAGAVWLFFFSRVLDLVDT-------KDSQVTFLHVYHHTAVVMFAWLAVKFVPGGHGVFF  311 (415)
Q Consensus       239 ~y~~~C~~~~~~~~~~~~~~~~~~~~f~lsK~~EllDT-------K~~qvsFLHvyHH~~~~~~~w~~~~~~~~~~~~~~  311 (415)
                      +|++.|++.+++++|.++|+++++|+||+||++||+||       |+|||||||||||++|++.+|.++++.+||+.++.
T Consensus        90 ~y~l~c~~~~~~~~~~~~r~~~~~~~yylsKflel~DTvFfVLRKk~rqlsFLHvyHH~~m~~~~~~~l~~~~~g~~~~~  169 (274)
T KOG3071|consen   90 AYNLRCQPCFPSDHEPKLRERFWSYLYYLSKFLELLDTVFFVLRKKDRQLSFLHVYHHGVMAFLSYLWLKFYGGGHGFFA  169 (274)
T ss_pred             ccceEEEecCCCCCCcceeehHHHHHHHHHHHHHHHhheeeEEEccCCceEEEEEEecchHHHhhhheeEEeCCceeeee
Confidence            79999999999999999999999999999999999999       55999999999999999999999999999999999


Q ss_pred             cchhhhHHHHHHHHHhHhhcCCccc-cchhhhhhhhhhHHHHHHHHHhhhhh-ccCCCCCCcHH-HHHHHHHHHHHHHHH
Q psy8080         312 GTINCFIHVVMYSYYSLTLYNPEYK-NVWWKKYLTQIQMMQFVAVGLHAILA-LLTPNCNYPKS-LIIIALPQDIFMFVL  388 (415)
Q Consensus       312 ~~~N~~VHviMY~YY~l~a~g~~~~-~~~~k~~iT~~QivQF~~~~~~~~~~-~~~~~C~~~~~-~~~~~~~~~~~~l~L  388 (415)
                      +.+|++||++||+||+++|+||+++ ++|||+++|.+|++||++..+|..+. +++++|..|++ +++.+.++.++|+.|
T Consensus       170 ~~lNs~VHviMY~YYflsa~G~~v~~~lWWkky~t~vQlvqf~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~l~L  249 (274)
T KOG3071|consen  170 ILLNSFVHVIMYGYYFLSAFGPRVQWYLWWKKYITIVQLVQFLILFVHTLYVHLFKPGCCFGIGAWAFNGSVINVSFLLL  249 (274)
T ss_pred             eehhhhHHHHHHHHHHHHhhCcCccccchHHHHHHHHHHHHHHHHHHHHhheeeecCCCCCchHHHHHHHHHHHHHHHHH
Confidence            9999999999999999999999999 99999999999999999999999998 66679999998 778878899999999


Q ss_pred             HHHHHHhhcCCCCCCC
Q psy8080         389 FADFYRKTYMKPATSG  404 (415)
Q Consensus       389 F~~Fy~~~Y~~~~~~~  404 (415)
                      |+|||+|+|.|+++++
T Consensus       250 F~nFY~~tY~k~~~~~  265 (274)
T KOG3071|consen  250 FSNFYIKTYKKPKKKK  265 (274)
T ss_pred             HHHHHHHHhccccccc
Confidence            9999999998866644

>PF01151 ELO: GNS1/SUR4 family; InterPro: IPR002076 This group of eukaryotic integral membrane proteins are evolutionary related, but exact function has not yet clearly been established

Probab=100.00  E-value=1.9e-44  Score=348.35  Aligned_cols=166  Identities=37%  Similarity=0.730  Sum_probs=148.0

Q ss_pred             Ccceeecccc-CCCCccccchhhHHHHHHHhhhhhhccC-----CCCceeEEEEeccchhhhhhhhhcccccCccceecc
Q psy8080         239 PIRFTCMEVD-YSDTPLGRSRAGAVWLFFFSRVLDLVDT-----KDSQVTFLHVYHHTAVVMFAWLAVKFVPGGHGVFFG  312 (415)
Q Consensus       239 ~y~~~C~~~~-~~~~~~~~~~~~~~~~f~lsK~~EllDT-----K~~qvsFLHvyHH~~~~~~~w~~~~~~~~~~~~~~~  312 (415)
                      .++..|++.+ ..+++...++++|.|+|++||++|++||     |+||+||||||||++|++.+|..+++.++|+.++.+
T Consensus        70 ~~~~~C~~~~~~~~~~~~~~~~~~~~~fylSK~~EllDTvflvLrkK~lsfLHvYHH~~~~~~~w~~~~~~~~~~~~~~~  149 (250)
T PF01151_consen   70 LYSSFCQPVDFDPDSYSSGRVGFWYWLFYLSKYYELLDTVFLVLRKKQLSFLHVYHHASTLLYCWISYKYGPGGQIWFIA  149 (250)
T ss_pred             cccccccccCCCCcccccchHHHHHHHHHHHHHHHHHHHHHHHHhCCCcchhHHhhhhhhhhhhhheeeeccccchhHHH
Confidence            6788996543 2344455678999999999999999999     888999999999999999999999999888999999


Q ss_pred             chhhhHHHHHHHHHhHhhcCCc-cccchhhhhhhhhhHHHHHHHHHhhhhhccC-----CCC---CCcHHHHHHHHHHHH
Q psy8080         313 TINCFIHVVMYSYYSLTLYNPE-YKNVWWKKYLTQIQMMQFVAVGLHAILALLT-----PNC---NYPKSLIIIALPQDI  383 (415)
Q Consensus       313 ~~N~~VHviMY~YY~l~a~g~~-~~~~~~k~~iT~~QivQF~~~~~~~~~~~~~-----~~C---~~~~~~~~~~~~~~~  383 (415)
                      ++|++||++||+||+++|+|.| . ++||||+||.+||+||++++++..+..+.     ++|   ++|.....+..++++
T Consensus       150 ~~N~~VH~iMY~YY~l~a~g~~~~-~~~~k~~IT~~Qi~QF~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~~~~  228 (250)
T PF01151_consen  150 ALNSFVHVIMYSYYFLSALGIRKV-PRWWKKYITSLQIVQFVIGIVHTVYALYYYFFPGGDCDTSGYPKFNAILGLVYYV  228 (250)
T ss_pred             HHHHHHHHHHHHHHHHHhcccccc-hhHHHHHHhHHhhhhhHHHHHHHHHHhheeccCCCCCCcchhHHHHHHHHHHHHH
Confidence            9999999999999999999976 3 47999999999999999999999888762     489   677899999999999


Q ss_pred             HHHHHHHHHHHhhcCCCCCCCC
Q psy8080         384 FMFVLFADFYRKTYMKPATSGK  405 (415)
Q Consensus       384 ~~l~LF~~Fy~~~Y~~~~~~~~  405 (415)
                      ++++||.|||+|+|.+|+++||
T Consensus       229 s~l~LF~~Fy~~~Y~~~~~~k~  250 (250)
T PF01151_consen  229 SYLYLFINFYIKSYIKKKKKKK  250 (250)
T ss_pred             HHHHHHHHHHHHHhCcCCCCCC
Confidence            9999999999999988887654

The proteins have from 290 to 435 amino acid residues. Structurally, they seem to be formed of three sections: a N-terminal region with two transmembrane domains, a central hydrophilic loop and a C-terminal region that contains from one to three transmembrane domains. Members of this family are involved in long chain fatty acid elongation systems that produce the 26-carbon precursors for ceramide and sphingolipid synthesis []. Predicted to be integral membrane proteins, in eukaryotes they are probably located on the endoplasmic reticulum. Yeast ELO3 (P40319 from SWISSPROT) affects plasma membrane H+-ATPase activity, and may act on a glucose-signalling pathway that controls the expression of several genes that are transcriptionally regulated by glucose such as PMA1 []. ; GO: 0016021 integral to membrane

>PTZ00251 fatty acid elongase; Provisional

Probab=100.00  E-value=3.8e-42  Score=334.89  Aligned_cols=162  Identities=23%  Similarity=0.368  Sum_probs=135.7

Q ss_pred             CcceeeccccCCCCc-cccchhhHHHHHHHhhhhhhccC-----CCCceeEEEEeccchhhhhhhhhcccccCcccee-c
Q psy8080         239 PIRFTCMEVDYSDTP-LGRSRAGAVWLFFFSRVLDLVDT-----KDSQVTFLHVYHHTAVVMFAWLAVKFVPGGHGVF-F  311 (415)
Q Consensus       239 ~y~~~C~~~~~~~~~-~~~~~~~~~~~f~lsK~~EllDT-----K~~qvsFLHvyHH~~~~~~~w~~~~~~~~~~~~~-~  311 (415)
                      .++..|++.   ++| ...++++|+|+|++||++||+||     |||||||||||||++|++.+|..+.  +|++..+ +
T Consensus        94 ~~~~~C~~~---~~~~~~~~~~~~~~~f~lsK~~El~DTvF~VLRKKqvsFLHvYHH~~~~~~~w~~~~--~g~~~~~~~  168 (272)
T PTZ00251         94 LHDTLCTFR---EDEFYTGKVGVAMGLFSISKVPEFGDTFFLIMGGKKLPFLSWFHHVTIFLYAWMSYQ--QGSSIWICA  168 (272)
T ss_pred             cceeeecCC---CCcchhHHHHHHHHHHHHHHHHHHHhHhhhhhcCCCchHHHHHHHHHHHHHHHHHHh--CCCcHHHHH
Confidence            577788642   233 24578999999999999999999     8889999999999999999999763  4444443 5


Q ss_pred             cchhhhHHHHHHHHHhHhhcCCccccchhhhhhhhhhHHHHHHHHHhhhhhcc-------CCCCCCcH-HHHHHHHHHHH
Q psy8080         312 GTINCFIHVVMYSYYSLTLYNPEYKNVWWKKYLTQIQMMQFVAVGLHAILALL-------TPNCNYPK-SLIIIALPQDI  383 (415)
Q Consensus       312 ~~~N~~VHviMY~YY~l~a~g~~~~~~~~k~~iT~~QivQF~~~~~~~~~~~~-------~~~C~~~~-~~~~~~~~~~~  383 (415)
                      +.+|++||++||+||+++|+||+.+..||||+||.+||+||++++++..+.+.       ..+|+++. .....+.++++
T Consensus       169 ~~lNs~VH~iMY~YY~lsa~g~~~~~~~~kk~IT~lQi~Qfv~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~~  248 (272)
T PTZ00251        169 AAMNYFVHSIMYFYFALSEAGFKKLVKPFAMYITLLQITQMVGGLFVSGYVIVQKLTKGDPKGCSGTTMATARGQLMIYI  248 (272)
T ss_pred             HHHHHHHHHHHHHHHHHHhcCCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCchHHHHHHHHHHHH
Confidence            89999999999999999999997323469999999999999999999887753       24799887 67777788999


Q ss_pred             HHHHHHHHHHHhhcCCCCCCCC
Q psy8080         384 FMFVLFADFYRKTYMKPATSGK  405 (415)
Q Consensus       384 ~~l~LF~~Fy~~~Y~~~~~~~~  405 (415)
                      +|++||+|||+|+|++++|+++
T Consensus       249 s~l~LF~~Fy~~~Y~~~~~~~~  270 (272)
T PTZ00251        249 FNFYLFSEMFVKGYVLPRKAKA  270 (272)
T ss_pred             HHHHHHHHHHHHHhCCCCCCCC
Confidence            9999999999999988766543

>KOG3072|consensus

Probab=100.00  E-value=9e-35  Score=278.66  Aligned_cols=157  Identities=27%  Similarity=0.403  Sum_probs=136.4

Q ss_pred             CcceeeccccCCCCccccchhhHHHHHHHhhhhhhccC-----CCCceeEEEEeccchhhhhhhhhcccccCccceeccc
Q psy8080         239 PIRFTCMEVDYSDTPLGRSRAGAVWLFFFSRVLDLVDT-----KDSQVTFLHVYHHTAVVMFAWLAVKFVPGGHGVFFGT  313 (415)
Q Consensus       239 ~y~~~C~~~~~~~~~~~~~~~~~~~~f~lsK~~EllDT-----K~~qvsFLHvyHH~~~~~~~w~~~~~~~~~~~~~~~~  313 (415)
                      -+...|++.++..++    .++|+|+|.+||..||+||     |+||++|||||||++++++.|.++.-. .+.+.+++.
T Consensus       103 f~~s~C~~~~~~~~~----~~fW~~~fvlSK~~ElgDT~FiVLRKrPliFlHWYHHi~~~iy~~~~y~~~-~a~~rw~i~  177 (282)
T KOG3072|consen  103 FKGSYCDANNLGLSV----SGFWSWLFVLSKAPELGDTIFIVLRKRPLIFLHWYHHILVLIYAWHSYIEK-VAWGRWFIW  177 (282)
T ss_pred             hheeeeecccCCcch----HHHHHHHHHHHhhhhhhceeEEEeccCccEEEechhhheeeeeeeeecccC-CcCceEEEE
Confidence            345689887654443    3899999999999999999     999999999999999999999998744 345678999


Q ss_pred             hhhhHHHHHHHHHhHhhcCCccccchhhhhhhhhhHHHHHHHHHhhhhhcc---CC--CCCCcHHHHHHHHHHHHHHHHH
Q psy8080         314 INCFIHVVMYSYYSLTLYNPEYKNVWWKKYLTQIQMMQFVAVGLHAILALL---TP--NCNYPKSLIIIALPQDIFMFVL  388 (415)
Q Consensus       314 ~N~~VHviMY~YY~l~a~g~~~~~~~~k~~iT~~QivQF~~~~~~~~~~~~---~~--~C~~~~~~~~~~~~~~~~~l~L  388 (415)
                      +|.+||++||+||+++|+|.|+| .+..+.||.+||+||++++........   ..  +|+.+.....++.+++++|++|
T Consensus       178 mNy~vHa~MY~YY~lrsl~ir~P-k~vam~iTtlQi~Qm~i~~~i~~~v~~~~~~~~~~c~~s~~~~~l~~~my~syfvL  256 (282)
T KOG3072|consen  178 MNYLVHAFMYSYYALRSLGIRLP-KSVAMAITTLQIVQMVIGCYIGTHVYYVKHTHQLLCQQSYKNLSLCFLMYISYFVL  256 (282)
T ss_pred             EehhHHHHHHHHHHHHHcCCCCC-hHHHHHHHHHHHHHHHHHHheeeEEEEEEecCCeeeeeeccchhhHHHHHHHHHHH
Confidence            99999999999999999999995 889999999999999998876544432   12  3999999999999999999999


Q ss_pred             HHHHHHhhcCCCC
Q psy8080         389 FADFYRKTYMKPA  401 (415)
Q Consensus       389 F~~Fy~~~Y~~~~  401 (415)
                      |+|||.++|+++.
T Consensus       257 f~~Ff~~aYi~~g  269 (282)
T KOG3072|consen  257 FANFFYQAYIKKG  269 (282)
T ss_pred             HHHHHHHHHhhhc
Confidence            9999999999974

>KOG3430|consensus

Probab=99.97  E-value=3e-31  Score=212.06  Aligned_cols=86  Identities=48%  Similarity=0.964  Sum_probs=82.9

Q ss_pred             hhhccccccCCCcHHHHHHHHHHHHHhhhhcC-chHHHHHHHHHhhhhccCCccEEEEccccceeEEee-CcEEEEEeCc
Q psy8080         149 ENKVALIKETTMEKDMQETAVNAAKEGLEKYN-IEREVAGHVKQHFDNTYGPYWQCTVGRNFGSYVSYD-DFYTYFYLGK  226 (415)
Q Consensus       149 e~~~~~I~~~dM~~emq~~~~~~a~~al~~~~-~~k~iA~~IK~~~Dkkyg~~WhcIVG~~fgs~vthe-~~~i~F~~~~  226 (415)
                      .+.++.|+.+|||++||++++++|.+|+++++ ++++||..||++||++||++||||||++|||+|||| ++||||++|.
T Consensus         2 ~~~~~~vk~tDM~~~mq~~a~~~a~~al~~f~~~~k~iA~~iKkefDkkyG~~WhcivG~~FGs~vThe~g~Fiyf~~g~   81 (90)
T KOG3430|consen    2 LERKAVVKATDMPEEMQQEAIELARQALEKFNVIEKDIAAFIKKEFDKKYGPTWHCIVGRNFGSYVTHETGHFIYFYLGV   81 (90)
T ss_pred             CCccceEecCCCChHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHhhhcCCccEEEEcCCcceEEEeecCcEEEEEece
Confidence            35678999999999999999999999999999 789999999999999999999999999999999999 9999999999


Q ss_pred             EEEEEEEe
Q psy8080         227 VAILLLQW  234 (415)
Q Consensus       227 ~~~l~~k~  234 (415)
                      +++|+||.
T Consensus        82 l~illfK~   89 (90)
T KOG3430|consen   82 LAILLFKC   89 (90)
T ss_pred             EEEEEEec
Confidence            99999985

>PTZ00059 dynein light chain; Provisional

Probab=99.96  E-value=1.2e-29  Score=208.50  Aligned_cols=86  Identities=48%  Similarity=0.971  Sum_probs=82.6

Q ss_pred             hhhccccccCCCcHHHHHHHHHHHHHhhhhcCchHHHHHHHHHhhhhccCCccEEEEccccceeEEee-CcEEEEEeCcE
Q psy8080         149 ENKVALIKETTMEKDMQETAVNAAKEGLEKYNIEREVAGHVKQHFDNTYGPYWQCTVGRNFGSYVSYD-DFYTYFYLGKV  227 (415)
Q Consensus       149 e~~~~~I~~~dM~~emq~~~~~~a~~al~~~~~~k~iA~~IK~~~Dkkyg~~WhcIVG~~fgs~vthe-~~~i~F~~~~~  227 (415)
                      +++++.|+.+|||+|||++|++++.+|+++++.++|+|++||++||++|||+||||||++|||++||| +++|||++|++
T Consensus         3 ~~~~~~i~~~dM~~emq~~a~~~~~~Al~~~~~~kdiA~~IK~~fD~~yg~~WhciVG~~Fgs~vthe~~~~i~F~~~~~   82 (90)
T PTZ00059          3 SDRKAVVKNADMSEDMQQDAIDCANQALEKFNIEKDIAAYIKKEFDKKYNPTWHCIVGRNFGSYVTHETKHFIYFYLGQV   82 (90)
T ss_pred             CCCccEEEECCCCHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHhhcCCCCEEEEecCeeEEEEEeCCcEEEEEECCE
Confidence            34567899999999999999999999999999999999999999999999999999999999999999 99999999999


Q ss_pred             EEEEEEe
Q psy8080         228 AILLLQW  234 (415)
Q Consensus       228 ~~l~~k~  234 (415)
                      ++|+||.
T Consensus        83 ~vLlfK~   89 (90)
T PTZ00059         83 AILLFKS   89 (90)
T ss_pred             EEEEEec
Confidence            9999995

>PLN03058 dynein light chain type 1 family protein; Provisional

Probab=99.96  E-value=2.2e-29  Score=217.71  Aligned_cols=93  Identities=31%  Similarity=0.547  Sum_probs=86.3

Q ss_pred             cchhhhhhhccccccCCCcHHHHHHHHHHHHHhhhhcC---chHHHHHHHHHhhhhccCCccEEEEccccceeEEee-Cc
Q psy8080         143 ENYLKAENKVALIKETTMEKDMQETAVNAAKEGLEKYN---IEREVAGHVKQHFDNTYGPYWQCTVGRNFGSYVSYD-DF  218 (415)
Q Consensus       143 e~~~k~e~~~~~I~~~dM~~emq~~~~~~a~~al~~~~---~~k~iA~~IK~~~Dkkyg~~WhcIVG~~fgs~vthe-~~  218 (415)
                      ++....++.+++|+.+|||++||++|+++|.+|+++++   +++|||++||++||++|||+||||||++|||++||| ++
T Consensus        26 ~~~~~~~~~dv~Ik~sDM~~emQ~~ave~a~~Al~k~~~~~~ekdIA~~IKk~fDkkYG~tWHCIVGk~FGs~VTHe~~~  105 (128)
T PLN03058         26 EQQDQKDELNVRVRASDMPLVLQNRAFSCARDILDAMPGKLDSKRLALALKKEFDSAYGPAWHCIVGTSFGSYVTHSTGG  105 (128)
T ss_pred             hHHhhccCCCCEEEECCCCHHHHHHHHHHHHHHHHHccccCCHHHHHHHHHHHHhhhhCCceEEEECCcEEEEEEEcCCc
Confidence            34445567899999999999999999999999999874   579999999999999999999999999999999999 99


Q ss_pred             EEEEEeCcEEEEEEEec
Q psy8080         219 YTYFYLGKVAILLLQWF  235 (415)
Q Consensus       219 ~i~F~~~~~~~l~~k~~  235 (415)
                      +|||++|+++||+||+-
T Consensus       106 fIyF~ig~~aiLLfKt~  122 (128)
T PLN03058        106 FLYFSIDKVYILLFKTA  122 (128)
T ss_pred             EEEEEECCEEEEEEecc
Confidence            99999999999999984

>PF01221 Dynein_light: Dynein light chain type 1 ; InterPro: IPR001372 Dynein is a multisubunit microtubule-dependent motor enzyme that acts as the force generating protein of eukaryotic cilia and flagella

Probab=99.95  E-value=2.3e-28  Score=200.64  Aligned_cols=87  Identities=40%  Similarity=0.783  Sum_probs=82.5

Q ss_pred             hhhhccccccCCCcHHHHHHHHHHHHHhhhhcCchHHHHHHHHHhhhhccCCccEEEEccccceeEEee-CcEEEEEeCc
Q psy8080         148 AENKVALIKETTMEKDMQETAVNAAKEGLEKYNIEREVAGHVKQHFDNTYGPYWQCTVGRNFGSYVSYD-DFYTYFYLGK  226 (415)
Q Consensus       148 ~e~~~~~I~~~dM~~emq~~~~~~a~~al~~~~~~k~iA~~IK~~~Dkkyg~~WhcIVG~~fgs~vthe-~~~i~F~~~~  226 (415)
                      |++.+++|+.+|||+|||++|++.|.+|++++++++|+|+.||++||++|||+||||||++||+++||| +++++|++|+
T Consensus         1 m~~~~~~i~~~dM~~~~~~~~~~~~~~a~~~~~~~~eiA~~iK~~lD~~yG~~Wh~IVG~~Fg~~~th~~~~~~~f~~~~   80 (89)
T PF01221_consen    1 MSENKIVIKSSDMPEEMQEEAIELAKEALKKYQDEKEIAEFIKQELDKKYGPTWHCIVGKSFGSSVTHEPGTFLYFKIGN   80 (89)
T ss_dssp             SGSCSEEEEEEES-HHHHHHHHHHHHHHHHHCSSHHHHHHHHHHHHHHHHSS-EEEEEESEEEEEEEEETTEEEEEEETT
T ss_pred             CCCCccEEEECCCCHHHHHHHHHHHHHHHHHCCcHHHHHHHHHHHHhcccCCceEEEECCcEEEEEEEcCCcEEEEEECC
Confidence            457889999999999999999999999999999999999999999999999999999999999999999 9999999999


Q ss_pred             EEEEEEEe
Q psy8080         227 VAILLLQW  234 (415)
Q Consensus       227 ~~~l~~k~  234 (415)
                      +++|+||+
T Consensus        81 ~~~li~kt   88 (89)
T PF01221_consen   81 IAFLIFKT   88 (89)
T ss_dssp             EEEEEEEE
T ss_pred             EEEEEEec
Confidence            99999996

The cytoplasmic isoform of dynein acts as a motor for the intracellular retrograde motility of vesicles and organelles along microtubules. Dynein is composed of a number of ATP-binding large subunits (see IPR004273 from INTERPRO), intermediate size subunits and small subunits. Among the small subunits, there is a family of highly conserved proteins which make up this family [, ]. Both type 1 (DLC1) and 2 (DLC2) dynein light chains have a similar two-layer alpha-beta core structure consisting of beta-alpha(2)-beta-X-beta(2) [, ].; GO: 0007017 microtubule-based process, 0005875 microtubule associated complex; PDB: 1F95_A 1F96_A 1F3C_A 3P8M_B 2XQQ_C 1RE6_A 1CMI_A 1PWK_A 1PWJ_A 4DS1_C ....

>PF01151 ELO: GNS1/SUR4 family; InterPro: IPR002076 This group of eukaryotic integral membrane proteins are evolutionary related, but exact function has not yet clearly been established

Probab=99.89  E-value=1.7e-23  Score=202.40  Aligned_cols=105  Identities=38%  Similarity=0.723  Sum_probs=85.7

Q ss_pred             CCcceehhhhhhhHHHHHhHHHHHhccCCCCccchhHHHHHhHHHHHHhhhccccccchhhhhHHhhhhccccccccccc
Q psy8080           2 RGQVAFFGTVNSFVHGVMYGYYLVSAFDPQNKWNLWWKKYITQLQLVRVLPGFGFRSSEQMELVVEEVHHSATTGLETYL   81 (415)
Q Consensus         2 ~g~~~~~~~~N~~VH~iMY~YY~l~a~g~~~~~~~~~k~~IT~lQi~Qf~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (415)
                      +|+..+.+++|++||++||+||+++|+|.+ +.|+||||+||.+||+||++|++.+.++                  .+.
T Consensus       142 ~~~~~~~~~~N~~VH~iMY~YY~l~a~g~~-~~~~~~k~~IT~~Qi~QF~~~~~~~~~~------------------~~~  202 (250)
T PF01151_consen  142 GGQIWFIAALNSFVHVIMYSYYFLSALGIR-KVPRWWKKYITSLQIVQFVIGIVHTVYA------------------LYY  202 (250)
T ss_pred             ccchhHHHHHHHHHHHHHHHHHHHHhcccc-cchhHHHHHHhHHhhhhhHHHHHHHHHH------------------hhe
Confidence            577788889999999999999999999972 3779999999999999999999654322                  000


Q ss_pred             eeeeEEeeeeeeecccCCCC---CCchHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCC
Q psy8080          82 KFQFIICGIHCTIQLCSSNC---KYPQFMLYFGLSQDIFMFFLFFDFYKKTYWSKGGAP  137 (415)
Q Consensus        82 ~~q~~~~~~h~~~~~~~~~C---~~~~~~~~~~~~~~~s~l~LF~~Fy~~~Y~~k~~~~  137 (415)
                      .         .   ....+|   ++|..+..++.++++++++||.|||+|+|++|++||
T Consensus       203 ~---------~---~~~~~C~~~~~~~~~~~~~~~~~~s~l~LF~~Fy~~~Y~~~~~~k  249 (250)
T PF01151_consen  203 Y---------F---FPGGDCDTSGYPKFNAILGLVYYVSYLYLFINFYIKSYIKKKKKK  249 (250)
T ss_pred             e---------c---cCCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHhCcCCCCC
Confidence            0         0   012589   667899999999999999999999999998877665

The proteins have from 290 to 435 amino acid residues. Structurally, they seem to be formed of three sections: a N-terminal region with two transmembrane domains, a central hydrophilic loop and a C-terminal region that contains from one to three transmembrane domains. Members of this family are involved in long chain fatty acid elongation systems that produce the 26-carbon precursors for ceramide and sphingolipid synthesis []. Predicted to be integral membrane proteins, in eukaryotes they are probably located on the endoplasmic reticulum. Yeast ELO3 (P40319 from SWISSPROT) affects plasma membrane H+-ATPase activity, and may act on a glucose-signalling pathway that controls the expression of several genes that are transcriptionally regulated by glucose such as PMA1 []. ; GO: 0016021 integral to membrane

>KOG3071|consensus

Probab=99.88  E-value=3.7e-23  Score=200.30  Aligned_cols=103  Identities=40%  Similarity=0.681  Sum_probs=87.0

Q ss_pred             CCcceehhhhhhhHHHHHhHHHHHhccCCCCccchhHHHHHhHHHHHHhhhccccccchhhhhHHhhhhccccccccccc
Q psy8080           2 RGQVAFFGTVNSFVHGVMYGYYLVSAFDPQNKWNLWWKKYITQLQLVRVLPGFGFRSSEQMELVVEEVHHSATTGLETYL   81 (415)
Q Consensus         2 ~g~~~~~~~~N~~VH~iMY~YY~l~a~g~~~~~~~~~k~~IT~lQi~Qf~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (415)
                      +|++.+.+.+|++||++||+||+++|+||+.++.+|||+++|.+|++||++-.+                          
T Consensus       163 ~g~~~~~~~lNs~VHviMY~YYflsa~G~~v~~~lWWkky~t~vQlvqf~~~~~--------------------------  216 (274)
T KOG3071|consen  163 GGHGFFAILLNSFVHVIMYGYYFLSAFGPRVQWYLWWKKYITIVQLVQFLILFV--------------------------  216 (274)
T ss_pred             CceeeeeeehhhhHHHHHHHHHHHHhhCcCccccchHHHHHHHHHHHHHHHHHH--------------------------
Confidence            489999999999999999999999999999999999999999999999986321                          


Q ss_pred             eeeeEEeeeeeeec-ccCCCCCCchH-HHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCC
Q psy8080          82 KFQFIICGIHCTIQ-LCSSNCKYPQF-MLYFGLSQDIFMFFLFFDFYKKTYWSKGGAPPP  139 (415)
Q Consensus        82 ~~q~~~~~~h~~~~-~~~~~C~~~~~-~~~~~~~~~~s~l~LF~~Fy~~~Y~~k~~~~~~  139 (415)
                               |..+. ...++|..|.+ +.+.+.+..++|++||.|||+|+|+++++++.+
T Consensus       217 ---------~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~l~LF~nFY~~tY~k~~~~~~~  267 (274)
T KOG3071|consen  217 ---------HTLYVHLFKPGCCFGIGAWAFNGSVINVSFLLLFSNFYIKTYKKPKKKKAK  267 (274)
T ss_pred             ---------HHhheeeecCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhccccccchh
Confidence                     11111 23468989988 777779999999999999999999887666543

>PTZ00251 fatty acid elongase; Provisional

Probab=99.86  E-value=2.8e-22  Score=195.64  Aligned_cols=101  Identities=26%  Similarity=0.289  Sum_probs=78.1

Q ss_pred             hhhhhhhHHHHHhHHHHHhccCCCCccchhHHHHHhHHHHHHhhhccccccchhhhhHHhhhhccccccccccceeeeEE
Q psy8080           8 FGTVNSFVHGVMYGYYLVSAFDPQNKWNLWWKKYITQLQLVRVLPGFGFRSSEQMELVVEEVHHSATTGLETYLKFQFII   87 (415)
Q Consensus         8 ~~~~N~~VH~iMY~YY~l~a~g~~~~~~~~~k~~IT~lQi~Qf~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~   87 (415)
                      ++++|++||++||+||+++|+|++ +..+||||+||.+||+||++|++.+.+.                  .+..  . .
T Consensus       168 ~~~lNs~VH~iMY~YY~lsa~g~~-~~~~~~kk~IT~lQi~Qfv~~~~~~~~~------------------~~~~--~-~  225 (272)
T PTZ00251        168 AAAMNYFVHSIMYFYFALSEAGFK-KLVKPFAMYITLLQITQMVGGLFVSGYV------------------IVQK--L-T  225 (272)
T ss_pred             HHHHHHHHHHHHHHHHHHHhcCCc-hhhhHHHHHHHHHHHHHHHHHHHHHHHH------------------HHhh--c-c
Confidence            599999999999999999999984 2345699999999999999998654221                  0000  0 0


Q ss_pred             eeeeeeecccCCCCCCch-HHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCC
Q psy8080          88 CGIHCTIQLCSSNCKYPQ-FMLYFGLSQDIFMFFLFFDFYKKTYWSKGGAP  137 (415)
Q Consensus        88 ~~~h~~~~~~~~~C~~~~-~~~~~~~~~~~s~l~LF~~Fy~~~Y~~k~~~~  137 (415)
                      +       ....+|+++. .....+.+++++|++||.|||+++|++|++++
T Consensus       226 ~-------~~~~~C~~~~~~~~~~~~~~~~s~l~LF~~Fy~~~Y~~~~~~~  269 (272)
T PTZ00251        226 K-------GDPKGCSGTTMATARGQLMIYIFNFYLFSEMFVKGYVLPRKAK  269 (272)
T ss_pred             c-------CCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCC
Confidence            0       1135799888 66777788999999999999999998775554

>KOG3072|consensus

Probab=99.82  E-value=1.6e-20  Score=180.61  Aligned_cols=101  Identities=27%  Similarity=0.353  Sum_probs=85.7

Q ss_pred             CCcceehhhhhhhHHHHHhHHHHHhccCCCCccchhHHHHHhHHHHHHhhhccccccchhhhhHHhhhhccccccccccc
Q psy8080           2 RGQVAFFGTVNSFVHGVMYGYYLVSAFDPQNKWNLWWKKYITQLQLVRVLPGFGFRSSEQMELVVEEVHHSATTGLETYL   81 (415)
Q Consensus         2 ~g~~~~~~~~N~~VH~iMY~YY~l~a~g~~~~~~~~~k~~IT~lQi~Qf~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (415)
                      .+.++|++.||.+||++||+||+++|+|+  |.|++..+.||.+||+||++|+...                  ..+.|+
T Consensus       169 ~a~~rw~i~mNy~vHa~MY~YY~lrsl~i--r~Pk~vam~iTtlQi~Qm~i~~~i~------------------~~v~~~  228 (282)
T KOG3072|consen  169 VAWGRWFIWMNYLVHAFMYSYYALRSLGI--RLPKSVAMAITTLQIVQMVIGCYIG------------------THVYYV  228 (282)
T ss_pred             CcCceEEEEEehhHHHHHHHHHHHHHcCC--CCChHHHHHHHHHHHHHHHHHHhee------------------eEEEEE
Confidence            47889999999999999999999999999  8899999999999999999999653                  222232


Q ss_pred             eeeeEEeeeeeeecccCCCCCCchHHHHHHHHHHHHHHHHHHHHHHhhcCCCC
Q psy8080          82 KFQFIICGIHCTIQLCSSNCKYPQFMLYFGLSQDIFMFFLFFDFYKKTYWSKG  134 (415)
Q Consensus        82 ~~q~~~~~~h~~~~~~~~~C~~~~~~~~~~~~~~~s~l~LF~~Fy~~~Y~~k~  134 (415)
                      .        |.    .+.+|..+..+..++.+++++|++||+|||.++|++|+
T Consensus       229 ~--------~~----~~~~c~~s~~~~~l~~~my~syfvLf~~Ff~~aYi~~g  269 (282)
T KOG3072|consen  229 K--------HT----HQLLCQQSYKNLSLCFLMYISYFVLFANFFYQAYIKKG  269 (282)
T ss_pred             E--------ec----CCeeeeeeccchhhHHHHHHHHHHHHHHHHHHHHhhhc
Confidence            2        11    11239888899999999999999999999999999884

>PF04155 Ground-like: Ground-like domain; InterPro: IPR007284 This group of proteins contain one or more copies of the ground-like domain, which are specific to Caenorhabditis elegans and Caenorhabditis briggsae

Probab=93.85  E-value=0.48  Score=37.50  Aligned_cols=54  Identities=13%  Similarity=0.122  Sum_probs=45.7

Q ss_pred             CchHHHHHHHHHhhhhccCCccEEEEccccceeEEee-CcEEEEEeCcEEEEEEE
Q psy8080         180 NIEREVAGHVKQHFDNTYGPYWQCTVGRNFGSYVSYD-DFYTYFYLGKVAILLLQ  233 (415)
Q Consensus       180 ~~~k~iA~~IK~~~Dkkyg~~WhcIVG~~fgs~vthe-~~~i~F~~~~~~~l~~k  233 (415)
                      .+..+.++.|.+..++++|+.+.||++++-=++.+|- ..+.-...+++.+++|+
T Consensus        22 ~~~~~s~~~Iq~~~e~~f~~~f~vIcs~~~Fsy~~~~~~~~C~~~~~g~~c~af~   76 (76)
T PF04155_consen   22 CNLSISKRAIQKAAEKRFGGSFEVICSEGDFSYSTHTDDLYCKVEKNGVTCLAFA   76 (76)
T ss_pred             CCHHHHHHHHHHHHHHHhCCCEEEEEeCCCceeEEecccceeeeeeCCEEEEEEC
Confidence            5567789999999999999999999998666666666 58888899999998874

It has been proposed that the ground-like domain containing proteins may bind and modulate the activity of Patched-like membrane molecules, reminiscent of the modulating activities of neuropeptides [].

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	415
1pwj_A	89	Structure Of The Monomeric 8-Kda Dynein Light Chain		3e-21
3p8m_A	92	Human Dynein Light Chain (Dynll2) In Complex With A		3e-21
1f3c_A	89	Refined Solution Structure Of 8kda Dynein Light Cha		3e-21
1re6_A	94	Localisation Of Dynein Light Chains 1 And 2 And The		3e-21
2pg1_A	91	Structural Analysis Of A Cytoplasmic Dynein Light C		4e-21
3brl_A	89	Crystal Structure Of Lc8 S88e SWA Length = 89		5e-21
1cmi_A	85	Structure Of The Human PinLC8 DIMER WITH A BOUND PE		5e-21
1rhw_A	89	The Solution Structure Of The Ph-Induced Monomer Of		7e-21
3dvh_A	91	Lc8 Point Mutant K36p Length = 91		3e-20
3rjs_A	89	Crystal Structure Of Dynein Light Chain 8a (Dlc8) F		6e-20
1pwk_A	91	Structure Of The Monomeric 8-Kda Dynein Light Chain		1e-19
1yo3_A	102	1.65 Angstrom Structure Of The Dynein Light Chain 1		5e-19
4ds1_A	97	The Structure Of A Yeast Dyn2-Nup159 Complex And Th		7e-13

>pdb|1PWJ|A Chain A, Structure Of The Monomeric 8-Kda Dynein Light Chain And Mechanism Of Domain Swapped Dimer Assembly Length = 89

Iteration: 1
 Score = 99.8 bits (247), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 43/85 (50%), Positives = 63/85 (74%), Gaps = 1/85 (1%)
Query: 150 NKVALIKETTMEKDMQETAVNAAKEGLEKYNIEREVAGHVKQHFDNTYGPYWQCTVGRNF 209
           ++ A+IK   M +DMQ+ AV+ A + +EKYNIE+++A ++K+ FD  Y P W C VGRNF
Sbjct: 3   DRKAVIKNADMSEDMQQDAVDCATQAMEKYNIEKDIAAYIKKEFDKKYNPTWHCIVGRNF 62
Query: 210 GSYVSYD-DFYTYFYLGKVAILLLQ 233
           GSYV+++   + YFYLG+VAILL +
Sbjct: 63  GSYVTHETKHFIYFYLGQVAILLFK 87

>pdb|3P8M|A Chain A, Human Dynein Light Chain (Dynll2) In Complex With An In Vitro Evolved Peptide Dimerized By Leucine Zipper Length = 92

Iteration: 1
 Score = 99.4 bits (246), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 43/85 (50%), Positives = 63/85 (74%), Gaps = 1/85 (1%)
Query: 150 NKVALIKETTMEKDMQETAVNAAKEGLEKYNIEREVAGHVKQHFDNTYGPYWQCTVGRNF 209
           ++ A+IK   M +DMQ+ AV+ A + +EKYNIE+++A ++K+ FD  Y P W C VGRNF
Sbjct: 6   DRKAVIKNADMSEDMQQDAVDCATQAMEKYNIEKDIAAYIKKEFDKKYNPTWHCIVGRNF 65
Query: 210 GSYVSYD-DFYTYFYLGKVAILLLQ 233
           GSYV+++   + YFYLG+VAILL +
Sbjct: 66  GSYVTHETKHFIYFYLGQVAILLFK 90

>pdb|1F3C|A Chain A, Refined Solution Structure Of 8kda Dynein Light Chain (Dlc8) Length = 89

Iteration: 1
 Score = 99.4 bits (246), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 43/85 (50%), Positives = 62/85 (72%), Gaps = 1/85 (1%)
Query: 150 NKVALIKETTMEKDMQETAVNAAKEGLEKYNIEREVAGHVKQHFDNTYGPYWQCTVGRNF 209
           ++ A+IK   M ++MQ+ +V  A + LEKYNIE+++A H+K+ FD  Y P W C VGRNF
Sbjct: 3   DRKAVIKNADMSEEMQQDSVECATQALEKYNIEKDIAAHIKKEFDKKYNPTWHCIVGRNF 62
Query: 210 GSYVSYD-DFYTYFYLGKVAILLLQ 233
           GSYV+++   + YFYLG+VAILL +
Sbjct: 63  GSYVTHETKHFIYFYLGQVAILLFK 87

>pdb|1RE6|A Chain A, Localisation Of Dynein Light Chains 1 And 2 And Their Pro- Apoptotic Ligands Length = 94

Iteration: 1
 Score = 99.4 bits (246), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 43/85 (50%), Positives = 63/85 (74%), Gaps = 1/85 (1%)
Query: 150 NKVALIKETTMEKDMQETAVNAAKEGLEKYNIEREVAGHVKQHFDNTYGPYWQCTVGRNF 209
           ++ A+IK   M +DMQ+ AV+ A + +EKYNIE+++A ++K+ FD  Y P W C VGRNF
Sbjct: 8   DRKAVIKNADMSEDMQQDAVDCATQAMEKYNIEKDIAAYIKKEFDKKYNPTWHCIVGRNF 67
Query: 210 GSYVSYD-DFYTYFYLGKVAILLLQ 233
           GSYV+++   + YFYLG+VAILL +
Sbjct: 68  GSYVTHETKHFIYFYLGQVAILLFK 92

>pdb|2PG1|A Chain A, Structural Analysis Of A Cytoplasmic Dynein Light Chain- Intermediate Chain Complex Length = 91

Iteration: 1
 Score = 99.4 bits (246), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 43/89 (48%), Positives = 64/89 (71%), Gaps = 1/89 (1%)
Query: 146 LKAENKVALIKETTMEKDMQETAVNAAKEGLEKYNIEREVAGHVKQHFDNTYGPYWQCTV 205
           +   ++ A+IK   M ++MQ+ AV+ A + LEKYNIE+++A ++K+ FD  Y P W C V
Sbjct: 1   MDMSDRKAVIKNADMSEEMQQDAVDCATQALEKYNIEKDIAAYIKKEFDKKYNPTWHCIV 60
Query: 206 GRNFGSYVSYDD-FYTYFYLGKVAILLLQ 233
           GRNFGSYV+++   + YFYLG+VAILL +
Sbjct: 61  GRNFGSYVTHETRHFIYFYLGQVAILLFK 89

>pdb|3BRL|A Chain A, Crystal Structure Of Lc8 S88e SWA Length = 89

Iteration: 1
 Score = 99.0 bits (245), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 43/85 (50%), Positives = 63/85 (74%), Gaps = 1/85 (1%)
Query: 150 NKVALIKETTMEKDMQETAVNAAKEGLEKYNIEREVAGHVKQHFDNTYGPYWQCTVGRNF 209
           ++ A+IK   M ++MQ+ AV+ A + LEKYNIE+++A ++K+ FD  Y P W C VGRNF
Sbjct: 3   DRKAVIKNADMSEEMQQDAVDCATQALEKYNIEKDIAAYIKKEFDKKYNPTWHCIVGRNF 62
Query: 210 GSYVSYDD-FYTYFYLGKVAILLLQ 233
           GSYV+++   + YFYLG+VAILL +
Sbjct: 63  GSYVTHETRHFIYFYLGQVAILLFK 87

>pdb|1CMI|A Chain A, Structure Of The Human PinLC8 DIMER WITH A BOUND PEPTIDE Length = 85

Iteration: 1
 Score = 98.6 bits (244), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 43/82 (52%), Positives = 60/82 (73%), Gaps = 1/82 (1%)
Query: 153 ALIKETTMEKDMQETAVNAAKEGLEKYNIEREVAGHVKQHFDNTYGPYWQCTVGRNFGSY 212
           A+IK   M ++MQ+ +V  A + LEKYNIE+++A H+K+ FD  Y P W C VGRNFGSY
Sbjct: 2   AVIKNADMSEEMQQDSVECATQALEKYNIEKDIAAHIKKEFDKKYNPTWHCIVGRNFGSY 61
Query: 213 VSYD-DFYTYFYLGKVAILLLQ 233
           V+++   + YFYLG+VAILL +
Sbjct: 62  VTHETKHFIYFYLGQVAILLFK 83

>pdb|1RHW|A Chain A, The Solution Structure Of The Ph-Induced Monomer Of Dynein Light Chain Lc8 From Drosophila Length = 89

Iteration: 1
 Score = 98.2 bits (243), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 43/85 (50%), Positives = 63/85 (74%), Gaps = 1/85 (1%)
Query: 150 NKVALIKETTMEKDMQETAVNAAKEGLEKYNIEREVAGHVKQHFDNTYGPYWQCTVGRNF 209
           ++ A+IK   M ++MQ+ AV+ A + LEKYNIE+++A ++K+ FD  Y P W C VGRNF
Sbjct: 3   DRKAVIKNADMSEEMQQDAVDCATQALEKYNIEKDIAAYIKKEFDKKYNPTWHCIVGRNF 62
Query: 210 GSYVSYD-DFYTYFYLGKVAILLLQ 233
           GSYV+++   + YFYLG+VAILL +
Sbjct: 63  GSYVTHETRHFIYFYLGQVAILLFK 87

>pdb|3DVH|A Chain A, Lc8 Point Mutant K36p Length = 91

Iteration: 1
 Score = 96.3 bits (238), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 43/89 (48%), Positives = 63/89 (70%), Gaps = 1/89 (1%)
Query: 146 LKAENKVALIKETTMEKDMQETAVNAAKEGLEKYNIEREVAGHVKQHFDNTYGPYWQCTV 205
           +   ++ A+IK   M ++MQ+ AV+ A + LEKYNIE ++A ++K+ FD  Y P W C V
Sbjct: 1   MDMSDRKAVIKNADMSEEMQQDAVDCATQALEKYNIEPDIAAYIKKEFDKKYNPTWHCIV 60
Query: 206 GRNFGSYVSYD-DFYTYFYLGKVAILLLQ 233
           GRNFGSYV+++   + YFYLG+VAILL +
Sbjct: 61  GRNFGSYVTHETRHFIYFYLGQVAILLFK 89

>pdb|3RJS|A Chain A, Crystal Structure Of Dynein Light Chain 8a (Dlc8) From Toxoplasma Gondii At 1.5 A Resolution Length = 89

Iteration: 1
 Score = 95.1 bits (235), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 39/85 (45%), Positives = 62/85 (72%), Gaps = 1/85 (1%)
Query: 150 NKVALIKETTMEKDMQETAVNAAKEGLEKYNIEREVAGHVKQHFDNTYGPYWQCTVGRNF 209
           ++ A+IK   M +D+Q+ A++ A + LEKYNIE+++A  +K+ FD  + P W C VGRNF
Sbjct: 3   DRKAVIKNADMPEDLQQDAIDCANQALEKYNIEKDIAAFIKKEFDRKHNPTWHCVVGRNF 62
Query: 210 GSYVSYDD-FYTYFYLGKVAILLLQ 233
           GSYV+++   + YFY+G+VA+LL +
Sbjct: 63  GSYVTHETHHFIYFYIGQVAVLLFK 87

>pdb|1PWK|A Chain A, Structure Of The Monomeric 8-Kda Dynein Light Chain And Mechanism Of Domain Swapped Dimer Assembly Length = 91

Iteration: 1
 Score = 94.4 bits (233), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 43/87 (49%), Positives = 63/87 (72%), Gaps = 3/87 (3%)
Query: 150 NKVALIKETTMEKDMQETAVNAAKEGLEKYNIEREVAGHVKQHFDNTYGPYWQCTVGR-- 207
           ++ A+IK   M +DMQ+ AV+ A + +EKYNIE+++A ++K+ FD  Y P W C VGR  
Sbjct: 3   DRKAVIKNADMSEDMQQDAVDCATQAMEKYNIEKDIAAYIKKEFDKKYNPTWHCIVGRSG 62
Query: 208 NFGSYVSYD-DFYTYFYLGKVAILLLQ 233
           NFGSYV+++   + YFYLG+VAILL +
Sbjct: 63  NFGSYVTHETKHFIYFYLGQVAILLFK 89

>pdb|1YO3|A Chain A, 1.65 Angstrom Structure Of The Dynein Light Chain 1 From Plasmodium Falciparum Length = 102

Iteration: 1
 Score = 92.4 bits (228), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 38/82 (46%), Positives = 60/82 (73%), Gaps = 1/82 (1%)
Query: 153 ALIKETTMEKDMQETAVNAAKEGLEKYNIEREVAGHVKQHFDNTYGPYWQCTVGRNFGSY 212
           +++K   M ++MQ  A++ A + L+KYN+E+++A H+K+ FD  Y P W C VGRNFGSY
Sbjct: 19  SVVKNVDMTEEMQIDAIDCANQALQKYNVEKDIAAHIKKEFDRKYDPTWHCVVGRNFGSY 78
Query: 213 VSYD-DFYTYFYLGKVAILLLQ 233
           V+++   + YFY+G+VAILL +
Sbjct: 79  VTHETKNFIYFYIGQVAILLFK 100

>pdb|4DS1|A Chain A, The Structure Of A Yeast Dyn2-Nup159 Complex And The Molecular Basis For The Dynein Light Chain - Nuclear Pore Interaction Length = 97

Iteration: 1
 Score = 71.6 bits (174), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 33/90 (36%), Positives = 57/90 (63%), Gaps = 2/90 (2%)
Query: 146 LKAENK-VALIKETTMEKDMQETAVNAAKEGLEKYNIEREVAGHVKQHFDNTYGPYWQCT 204
           +  ENK   ++K + +   ++E  +  +K+ L+KY +ER++AG VK+  D  YG  W   
Sbjct: 6   MSDENKSTPIVKASDITDKLKEDILTISKDALDKYQLERDIAGTVKKQLDVKYGNTWHVI 65
Query: 205 VGRNFGSYVSYDD-FYTYFYLGKVAILLLQ 233
           VG+NFGSYV+++   + YFY+G +A L+ +
Sbjct: 66  VGKNFGSYVTHEKGHFVYFYIGPLAFLVFK 95
  Database: pdbaa

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	415
4ds1_A	97	Dynein light chain 1, cytoplasmic; dynein light ch	5e-28
1yo3_A	102	Dynein light chain 1; structural genomics consorti	3e-27

>4ds1_A Dynein light chain 1, cytoplasmic; dynein light chain fold, peptide binding, nucle structural protein-transport protein complex; 1.85A {Saccharomyces cerevisiae} Length = 97

 Score =  105 bits (263), Expect = 5e-28
 Identities = 30/82 (36%), Positives = 52/82 (63%), Gaps = 1/82 (1%)

Query: 151 KVALIKETTMEKDMQETAVNAAKEGLEKYNIEREVAGHVKQHFDNTYGPYWQCTVGRNFG 210
              ++K + +   ++E  +  +K+ L+KY +ER++AG VK+  D  YG  W   VG+NFG
Sbjct: 12  STPIVKASDITDKLKEDILTISKDALDKYQLERDIAGTVKKQLDVKYGNTWHVIVGKNFG 71

Query: 211 SYVSYD-DFYTYFYLGKVAILL 231
           SYV+++   + YFY+G +A L+
Sbjct: 72  SYVTHEKGHFVYFYIGPLAFLV 93

>1yo3_A Dynein light chain 1; structural genomics consortium, microtub malaria, SGC, transport protein; 1.65A {Plasmodium falciparum} PDB: 1f3c_A 1f95_A 1f96_A 1rhw_A 2p1k_A 2p2t_A 3bri_A 3e2b_A 3fm7_E 3glw_A 3dvt_A 2pg1_A 3p8m_A 1pwj_A 2xqq_A 3brl_A 1re6_A 1cmi_A 3dvh_A 3dvp_A ... Length = 102

 Score =  103 bits (259), Expect = 3e-27
 Identities = 39/98 (39%), Positives = 62/98 (63%), Gaps = 2/98 (2%)

Query: 135 GAPPPPPEENYLKAENKVALIKETTMEKDMQETAVNAAKEGLEKYNIEREVAGHVKQHFD 194
           G+       +        +++K   M ++MQ  A++ A + L+KYN+E+++A H+K+ FD
Sbjct: 2   GSSHHHHHHSSGLVPRG-SVVKNVDMTEEMQIDAIDCANQALQKYNVEKDIAAHIKKEFD 60

Query: 195 NTYGPYWQCTVGRNFGSYVSYD-DFYTYFYLGKVAILL 231
             Y P W C VGRNFGSYV+++   + YFY+G+VAILL
Sbjct: 61  RKYDPTWHCVVGRNFGSYVTHETKNFIYFYIGQVAILL 98

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	415
3rjs_A	89	Dynein light chain motor protein; parasite, LC8, D	99.97
4ds1_A	97	Dynein light chain 1, cytoplasmic; dynein light ch	99.96
1yo3_A	102	Dynein light chain 1; structural genomics consorti	99.96

>3rjs_A Dynein light chain motor protein; parasite, LC8, DLC8, TGDLC8, LIG PIN, DLC1, dynll1, transport protein; 1.50A {Toxoplasma gondii} PDB: 1pwj_A 2xqq_A 1re6_A 3p8m_A 3dvt_A 2pg1_A 1rhw_A 2p1k_A 2p2t_A 3bri_A 3e2b_A 3fm7_E 3glw_A 3brl_A 3dvh_A 3dvp_A 1pwk_A 1f3c_A 1f95_A 1f96_A ...

Probab=99.97  E-value=6.5e-32  Score=220.30  Aligned_cols=87  Identities=45%  Similarity=0.923  Sum_probs=83.1

Q ss_pred             hhhhccccccCCCcHHHHHHHHHHHHHhhhhcCchHHHHHHHHHhhhhccCCccEEEEccccceeEEee-CcEEEEEeCc
Q psy8080         148 AENKVALIKETTMEKDMQETAVNAAKEGLEKYNIEREVAGHVKQHFDNTYGPYWQCTVGRNFGSYVSYD-DFYTYFYLGK  226 (415)
Q Consensus       148 ~e~~~~~I~~~dM~~emq~~~~~~a~~al~~~~~~k~iA~~IK~~~Dkkyg~~WhcIVG~~fgs~vthe-~~~i~F~~~~  226 (415)
                      |++.+++|+.+|||+|||++|+++|.+|+++++.++|+|++||++||++|||+||||||++|||++||| +++|||++|+
T Consensus         1 m~~~k~~i~~~dM~~emq~~a~~~a~~al~~~~~ek~iA~~IK~~fD~kyg~~WhciVG~~Fgs~vthe~~~fiyF~~g~   80 (89)
T 3rjs_A            1 MADRKAVIKNADMPEDLQQDAIDCANQALEKYNIEKDIAAFIKKEFDRKHNPTWHCVVGRNFGSYVTHETHHFIYFYIGQ   80 (89)
T ss_dssp             --CCCCEEEEEESCHHHHHHHHHHHHHHHHHCCSHHHHHHHHHHHHHHHHCSCCEEEEESSCCCCCCEEEEEEEEEEETT
T ss_pred             CCCCccEEEECCCCHHHHHHHHHHHHHHHHHCCcHHHHHHHHHHHHhcccCCCCEEEEecCeeEEEEEcCCcEEEEEECC
Confidence            345678999999999999999999999999999999999999999999999999999999999999999 9999999999


Q ss_pred             EEEEEEEe
Q psy8080         227 VAILLLQW  234 (415)
Q Consensus       227 ~~~l~~k~  234 (415)
                      +++|+||+
T Consensus        81 ~~iLlfKt   88 (89)
T 3rjs_A           81 VAVLLFKS   88 (89)
T ss_dssp             EEEEEEEE
T ss_pred             EEEEEEec
Confidence            99999997

>4ds1_A Dynein light chain 1, cytoplasmic; dynein light chain fold, peptide binding, nucle structural protein-transport protein complex; 1.85A {Saccharomyces cerevisiae}

Probab=99.96  E-value=1.1e-30  Score=216.21  Aligned_cols=85  Identities=35%  Similarity=0.818  Sum_probs=82.5

Q ss_pred             hhccccccCCCcHHHHHHHHHHHHHhhhhcCchHHHHHHHHHhhhhccCCccEEEEccccceeEEee-CcEEEEEeCcEE
Q psy8080         150 NKVALIKETTMEKDMQETAVNAAKEGLEKYNIEREVAGHVKQHFDNTYGPYWQCTVGRNFGSYVSYD-DFYTYFYLGKVA  228 (415)
Q Consensus       150 ~~~~~I~~~dM~~emq~~~~~~a~~al~~~~~~k~iA~~IK~~~Dkkyg~~WhcIVG~~fgs~vthe-~~~i~F~~~~~~  228 (415)
                      ..+++|+.+|||+|||++|+++|.+|++++++++|||++||++||++|||+||||||++|||++||| +++|||++|+++
T Consensus        11 ~~k~~I~~~DM~~emq~~a~~~a~~al~~~~~ek~iA~~IK~~fDkkyG~~WhcIVG~~Fgs~vThe~~~fiyF~~g~~a   90 (97)
T 4ds1_A           11 KSTPIVKASDITDKLKEDILTISKDALDKYQLERDIAGTVKKQLDVKYGNTWHVIVGKNFGSYVTHEKGHFVYFYIGPLA   90 (97)
T ss_dssp             -CCCEEEEEEECHHHHHHHHHHHHHHHHHCSSHHHHHHHHHHHHHHHHCSCEEEEEEEEEEEEEEECTTEEEEEEETTEE
T ss_pred             CCccEEEECCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhCccCCCCEEEEccCccEEEEEcCCcEEEEEECCEE
Confidence            3678999999999999999999999999999999999999999999999999999999999999999 999999999999


Q ss_pred             EEEEEe
Q psy8080         229 ILLLQW  234 (415)
Q Consensus       229 ~l~~k~  234 (415)
                      +|+||+
T Consensus        91 iLlfKt   96 (97)
T 4ds1_A           91 FLVFKT   96 (97)
T ss_dssp             EEEEEC
T ss_pred             EEEEec
Confidence            999996

>1yo3_A Dynein light chain 1; structural genomics consortium, microtub malaria, SGC, transport protein; 1.65A {Plasmodium falciparum} PDB: 1f3c_A 1f95_A 1f96_A 1rhw_A 2p1k_A 2p2t_A 3bri_A 3e2b_A 3fm7_E 3glw_A 3dvt_A 2pg1_A 3p8m_A 1pwj_A 2xqq_A 3brl_A 1re6_A 1cmi_A 3dvh_A 3dvp_A ...

Probab=99.96  E-value=2.5e-30  Score=215.61  Aligned_cols=85  Identities=45%  Similarity=0.944  Sum_probs=81.7

Q ss_pred             hhccccccCCCcHHHHHHHHHHHHHhhhhcCchHHHHHHHHHhhhhccCCccEEEEccccceeEEee-CcEEEEEeCcEE
Q psy8080         150 NKVALIKETTMEKDMQETAVNAAKEGLEKYNIEREVAGHVKQHFDNTYGPYWQCTVGRNFGSYVSYD-DFYTYFYLGKVA  228 (415)
Q Consensus       150 ~~~~~I~~~dM~~emq~~~~~~a~~al~~~~~~k~iA~~IK~~~Dkkyg~~WhcIVG~~fgs~vthe-~~~i~F~~~~~~  228 (415)
                      ..+++|+.+|||+|||++|+++|.+|++++++++|+|++||++||++|||+||||||++|||++||| +++|||++|+++
T Consensus        16 ~~~~~I~~~DM~~emq~~a~~~a~~Al~k~~~ekdiA~~IK~~fDkkyG~~WHcIVG~~FGs~vThe~~~fiyF~~g~~a   95 (102)
T 1yo3_A           16 PRGSVVKNVDMTEEMQIDAIDCANQALQKYNVEKDIAAHIKKEFDRKYDPTWHCVVGRNFGSYVTHETKNFIYFYIGQVA   95 (102)
T ss_dssp             --CCCEEETTSCHHHHHHHHHHHHHHHHHCSSHHHHHHHHHHHHHHHHCSCEEEEESSSCCCEEESCCCEEEEEEETTEE
T ss_pred             CCCCEEEECCCCHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHhhhcCCCCEEEEccCeeEEEEEeCCcEEEEEECCEE
Confidence            4778999999999999999999999999999999999999999999999999999999999999999 999999999999


Q ss_pred             EEEEEe
Q psy8080         229 ILLLQW  234 (415)
Q Consensus       229 ~l~~k~  234 (415)
                      ||+||+
T Consensus        96 iLlfKt  101 (102)
T 1yo3_A           96 ILLFKS  101 (102)
T ss_dssp             EEEEEC
T ss_pred             EEEEec
Confidence            999996

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	415
d3e2ba1	87	d.39.1.1 (A:3-89) Dynein light chain 1 (DLC1) {Fru	3e-26

>d3e2ba1 d.39.1.1 (A:3-89) Dynein light chain 1 (DLC1) {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Length = 87

class: Alpha and beta proteins (a+b)
fold: DLC
superfamily: DLC
family: DLC
domain: Dynein light chain 1 (DLC1)
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

 Score = 99.0 bits (247), Expect = 3e-26
 Identities = 45/86 (52%), Positives = 63/86 (73%), Gaps = 3/86 (3%)

Query: 153 ALIKETTMEKDMQETAVNAAKEGLEKYNIEREVAGHVKQHFDNTYGPYWQCTVGRNFGSY 212
           A+IK   M ++MQ+ AV+ A + LEKYNIE+++A ++K+ FD  Y P W C VGRNFGSY
Sbjct: 4   AVIKNADMSEEMQQDAVDCATQALEKYNIEKDIAAYIKKEFDKKYNPTWHCIVGRNFGSY 63

Query: 213 VSYD-DFYTYFYLGKVAILLLQWFSG 237
           V+++   + YFYLG+VAILL  + SG
Sbjct: 64  VTHETRHFIYFYLGQVAILL--FKSG 87

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	415
d3e2ba1	87	Dynein light chain 1 (DLC1) {Fruit fly (Drosophila	99.96

>d3e2ba1 d.39.1.1 (A:3-89) Dynein light chain 1 (DLC1) {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Alpha and beta proteins (a+b)
fold: DLC
superfamily: DLC
family: DLC
domain: Dynein light chain 1 (DLC1)
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=99.96  E-value=7.9e-31  Score=211.07  Aligned_cols=84  Identities=51%  Similarity=0.986  Sum_probs=81.9

Q ss_pred             hccccccCCCcHHHHHHHHHHHHHhhhhcCchHHHHHHHHHhhhhccCCccEEEEccccceeEEee-CcEEEEEeCcEEE
Q psy8080         151 KVALIKETTMEKDMQETAVNAAKEGLEKYNIEREVAGHVKQHFDNTYGPYWQCTVGRNFGSYVSYD-DFYTYFYLGKVAI  229 (415)
Q Consensus       151 ~~~~I~~~dM~~emq~~~~~~a~~al~~~~~~k~iA~~IK~~~Dkkyg~~WhcIVG~~fgs~vthe-~~~i~F~~~~~~~  229 (415)
                      +++.|+.+|||+|||++++++|.+|++++++++|+|++||++||++|||+||||||++|||++||| ++++||++|++++
T Consensus         2 ~k~vik~~DM~~em~~~a~~~~~~al~~~~~~~diA~~IK~~~D~kyg~~WhcIVG~~Fgs~vthe~~~~i~F~~g~~~~   81 (87)
T d3e2ba1           2 RKAVIKNADMSEEMQQDAVDCATQALEKYNIEKDIAAYIKKEFDKKYNPTWHCIVGRNFGSYVTHETRHFIYFYLGQVAI   81 (87)
T ss_dssp             CCEEEEEEEECHHHHHHHHHHHHHHHHHCCSHHHHHHHHHHHHHHHHCSCEEEEEESSCEEEEEEETTEEEEEEETTEEE
T ss_pred             CcceEEECCCCHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHhhCCccEEEECCCeeEEEEecCCcEEEEEECCEEE
Confidence            567899999999999999999999999999999999999999999999999999999999999999 9999999999999


Q ss_pred             EEEEe
Q psy8080         230 LLLQW  234 (415)
Q Consensus       230 l~~k~  234 (415)
                      |+||+
T Consensus        82 Ll~Kt   86 (87)
T d3e2ba1          82 LLFKS   86 (87)
T ss_dssp             EEEEC
T ss_pred             EEEec
Confidence            99996