Psyllid ID: psy8169

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-------720-------730-------740-------750-------760-------770-------780-------790-------800-------810-------820-------830-------840---
Protein Sequence
MQMIISEHIKSHEYVENHMCELCYKVFESRENLMRHLKIHDDKESKRFKCEQCDKRFSSNAELNKHSSAIHQRLKLHECDLCGKNFSQRNNLKRQANGSNVNNRFSSNAELNKHSSAIHQRLKLHECDLCGKNFSQRNNLKRHLEEVHRTDGMKFECYVCSKVLATSHSLKRHLLIHNGPKYTCEICAKEFTRVYELNIHKKLHEDESVANQLKCEFCGKVFLKKSNLKAHIENNHLDYSCLECKAVGEEISFDTKKNLLLHLKTKHKNVISNVYLTCLICFKTFLTEVDLGKHMKMHMDDNQIQCRFCNKYFSRNYNLKQHMKTCTKNVSNGILNCDDNEGEYNGHGSHEENEDDEDYDDMNEMMLVPVIKMELKEENEENEDRENQSEEENYTPVPEVSIKRETDPLSVEDIISAGEVSITPIPQSNTNNHGSGSTNNTQANKIIQCHICLKTFAKKDSLKKHMKVFHTYISPDAIKEESGEGKPNILEVILQEGKVPNNNAIIQCRICSKTFTRKDSLRKHMRRFHIINDTNVKKEFTEGQINRNMLDVILKESGHEIKSRIPCELCYKTFTRKDSLRKHMKIFHTRRNPSANSGNSGTSAPPAVKLEQNGGEKVENSTSVENSTSVENSTSVENSANVENTSSVDNRTSVGPVAPIDRIPCTLCDKTFTRKDSLKKHIRIFHTQNQPQHTNVIEVALGARANAAFIDRIRCELCDKSFTRKDSLKKHNRIFHGGADPKVMDEQMARGSADFLEVVLNEDGEGEPVSITNEILCKICNRTFTRNYNLKKHMKTVHKIDDNEPYFAYENTEYDEEEGEMEGEEFGSLSNSMLEVIIRDDEQ
Secondary Structure (PSIPRED)
ccccHHHHHHcccccccccccccccccccccHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHcccccccccccccccccccccccccHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHccccccccccccccccccccccccccHHHHHccccccccccccccccccccccccHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHcccccccccccccccccccccccHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEEEccccccccccccccccccccccccccccHHHccccccccccccccccccccccccccccccccccccccHHHHcccccccc
Secondary Structure Prediction (SSPRO)
cccHHHHHHHHcccccccEcccccccEccccHHHHHHHHcccccccccccccccccEccccHHHHHHHHHcccccccccccccccEccccccHEccccHHcccccccccHHHHHHHHHcccccccccccccccEcccccHHHHEEEEEcccccccccccccccEccccHHHHHHHHccccEEEcccccccEccccHHHHHHHHccccccccccccccccccEccccHHHHHHHHHcccccccccccccccHEEccccHHHHHHHHHccccccccccEcccccccEccccHHHHHHHHccccccccccHccccEccccHHHHHHHHccccccccccHccccEccccHHHHHHHHccccccccccHccccEccccHHHHHEHHccccccccccccccEccccHHHHHHHHccccccccccHccccEccccHHHHHHHHEccccccccccEcccccccEcccccHHHHEEEEcccccccccccccccccEccccHHHHHHHHccccccccccHccccEccccHHHHHHHHHcccccccEccccccccEEcccccHHHHHHHcccccccccccccccEccccHHHHHEEEEcccccccEccHccccEcccccccEEcccccccEcccccccEccccHHHHHHHHcccccccHHHHHHcHEcccccccccccccccEcccccHHEEEEEEEccccccccccccccEccccccEEcccccccHccccEccccHHHHHHHHccccccccccccccccccccHHHHHHHHccccEEcccccccEccHccccEccccHHHHHHHHHHccccccccEccccccccccccccccccEcccccHHHHHHHccccc
Coil and Loop (DISEMBL)
MQMIISEHIKSHEYVENHMCELCYKVFESRENLMRHLKIhddkeskrfkceqcdkRFSSNAELNKHSSAIHQRLKLhecdlcgknfsqrnnlkrqangsnvnnrfssnaelnkhsSAIHQRLKLhecdlcgknfsqrNNLKRHLEEvhrtdgmkfeCYVCSKVLATSHSLKRhllihngpkytceICAKEFTRVYELNIHKKLHEDESVANQLKcefcgkvflkksnlkahiennhldysclecKAVGEEISFDTKKNLLLHLKTKHKNVISNVYLTCLICFKTFLTEVDlgkhmkmhmddnqiqcrfcnkyfsrnynlkqHMKTCTKNvsngilncddnegeynghgsheeneddedyddmnemmLVPVIKMELkeeneenedrenqseeenytpvpevsikretdplsveDIISAgevsitpipqsntnnhgsgstnntqanKIIQCHICLKTFAKKDSLKKHMKVFHTYispdaikeesgegkpNILEVILQegkvpnnnaiiqcricsktftrkdSLRKHMRRFHiindtnvkkeftegqiNRNMLDVILKESGheiksripcelcyktftrkDSLRKHMKIFhtrrnpsansgnsgtsappavkleqnggekvenstsvenstsvenstsvensanventssvdnrtsvgpvapidripctlcdktftrkDSLKKHIRIFhtqnqpqhTNVIEVALGARANAAFIDRIRCelcdksftrkdslkkhnrifhggadpkvmdEQMARGSADFLEVVLnedgegepvsiTNEILCKICNRTFTRNYNLKKHMktvhkiddnepyfayenteydeeegemegeefgslSNSMLEVIIRDDEQ
Flexible Loop (DISEMBL)
MQMIISEhiksheyveNHMCELCYKVFESRENLMRHLkihddkeskrfKCEQCDKRFSSNAELNKHSSAIHQRLKLHECDLCGKNFSQRnnlkrqangsnvnnRFSSNAELNKHSSAIHQRLKLHECDLCGKNFSQRNNLKRHLEEVHRTDGMKFECYVCSKVLATSHSLKRHLLIHNGPKYTCEICAKEFTRVYELNIHKKLHEDESVANQLKCEFCGKVFLKKSNLKAHIENNHLDYSCLECKAVGEEISFDTKKNLLLHLKTKHKNVISNVYLTCLICFKTFLTEVDLGKHMKMHMDDNQIQCRFCNKYFSRNYNLKQHMKTCTKNVSNGILNCDDNEGEYNGHGSHEENEDDEDYDDMNEMMLVPVIKMELKEENEenedrenqseeenytpvpevsikretdpLSVEDIISAGEVSITPIPQSNTNNHGSGSTNNTQANKIIQCHICLKTFAKKDSLKKHMKVFHTYISpdaikeesgeGKPNILEVILQegkvpnnnaiiqcricsktftrkdslrkhmrrfhiindtnvkkeftegqiNRNMLDVILKESGheiksripcelcyKTFTRKDSLRKHMKIFhtrrnpsansgnsgtsappavKLEQNGGEkvenstsvenstsvenstsvensanventssvdnrtsvgpvapidripctlcdKTFTRKDSLKKHIRifhtqnqpqhtNVIEVALGARANAAFIDRIRCELCDKSftrkdslkkhnrifhggadpkVMDEQMARGSADFLEVVLNEdgegepvsitneilCKICNRTFTRnynlkkhmktvhkiddnepyfAYENTEYDEEEGEMEgeefgslsnsmleviirddeq
Low Complexity Region (SEG)
MQMIISEHIKSHEYVENHMCELCYKVFESRENLMRHLKIHDDKESKRFKCEQCDKRFSSNAELNKHSSAIHQRLKLHECDLCGKNFSQRNNLKRQANGSNVNNRFSSNAELNKHSSAIHQRLKLHECDLCGKNFSQRNNLKRHLEEVHRTDGMKFECYVCSKVLATSHSLKRHLLIHNGPKYTCEICAKEFTRVYELNIHKKLHEDESVANQLKCEFCGKVFLKKSNLKAHIENNHLDYSCLECKAVGEEISFDtkknlllhlktkhknVISNVYLTCLICFKTFLTEVDLGKHMKMHMDDNQIQCRFCNKYFSRNYNLKQHMKTCTKNVSNGILNCDDNEGEYNGHGSHeeneddedyddmnemmLVPVIKMelkeeneenedrenqseeenYTPVPEVSIKRETDPLSVEDIISAGEVSITPIPQsntnnhgsgstnntQANKIIQCHICLKTFAKKDSLKKHMKVFHTYISPDAIKEESGEGKPNILEVILQEGKVPNNNAIIQCRICSKTFTRKDSLRKHMRRFHIINDTNVKKEFTEGQINRNMLDVILKESGHEIKSRIPCELCYKTFTRKDSLRKHMKIFHTRRNPSANSGNSGTSAPPAVKLEQNGGEKVENSTSVENSTSVENSTSVENSANVENTSSVDNRTSVGPVAPIDRIPCTLCDKTFTRKDSLKKHIRIFHTQNQPQHTNVIEVALGARANAAFIDRIRCELCDKSFTRKDSLKKHNRIFHGGADPKVMDEQMARGSADFLEVVLNEDGEGEPVSITNEILCKICNRTFTRNYNLKKHMKTVHKIDDNEPYFAYenteydeeegemegeefgSLSNSMLEVIIRDDEQ
Disordered region (IsUnstruct)
*******HIKSHEYVENHMCELCYKVFESRENLMRHLKI********************************QRLKLHECDLCGK**********************************HQRLKLHECDLCGKNFSQRNNLKRHLEEVHRTDGMKFECYVCSKVLATSHSLKRHLLIHNGPKYTCEICAKEFTRVYELNIHKKLHEDESVANQLKCEFCGKVFLKKSNLKAHIENNHLDYSCLECKAVGEEISFDTKKNLLLHLKTKHKNVISNVYLTCLICFKTFLTEVDLGKHMKMHMDDNQIQCRFCNKYFSRNYNLKQHMKTCTKNVSNGILNC**********************************************************************************************************NKIIQCHICLKTFAKKDSLKKHMKVFHTYISPDAI*********NILEVILQEGKVPNNNAIIQCRICSKTFTRKDSLRKHMRRFHIINDTNVKKEFTEGQINRNMLDVILKESGHEIKSRIPCELCYKTFTRKDSLRKHMKI*********************************************************************PVAPIDRIPCTLCDKTFTRKDSLKKHIRIFHTQNQPQHTNVIEVALGARANAAFIDRIRCELCDKSFTRKDSLK*HNRIFH****************ADFLEVVLNEDGEGEPVSITNEILCKICNRTFTRNYNLKKHMKTVHKIDDNEPYFAYE*********************************
Disordered Region (DISOPRED)
*QMIISEHIKSHEYVENHMCELCYKVFESRENLMRHLKIHDDKESKRFKCEQCDKRFSSNAELNKHSSAIHQRLKLHECDLCGKNFSQRNNLKRQANGSNVNNRFSSNAELNKHSSAIHQRLKLHECDLCGKNFSQRNNLKRHLEEVHRTDGMKFECYVCSKVLATSHSLKRHLLIHNGPKYTCEICAKEFTRVYELNIHKKLHEDESVANQLKCEFCGKVFLKKSNLKAHIENNHLDYSCLECKAVGEEISFDTKKNLLLHLKTKHKNVISNVYLTCLICFKTFLTEVDLGKHMKMHMDDNQIQCRFCNKYFSRNYNLKQHMKTCTKNVSNGILNCDDNEGEYNGHGSHEENEDDEDYDDMNEMMLVPVIKMELKEENEENEDRENQSEEENYTPVPEVSIKRETDPLSVEDIISAGEVSITPIPQSNTNNHGSGSTNNTQANKIIQCHICLKTFAKKDSLKKHMKVFHTYISPDAIKEESGEGKPNILEVILQEGKVPNNNAIIQCRICSKTFTRKDSLRKHMRRFHIINDTNVKKEFTEGQINRNMLDVILKESGHEIKSRIPCELCYKTFTRKDSLRKHMKIFHTRRNPSANSGNSGTS***A*KLEQNGGEKVENSTSVENSTSVENSTSVENSANVENTSSVDNRTSVGPVAPIDRIPCTLCDKTFTRKDSLKKHIRIFHTQNQPQHTNVIEVALGARANAAFIDRIRCELCDKSFTRKDSLKKHNRIFHGGADPKVMDEQMARGSADFLEVVLNEDGEGEPVSITNEILCKICNRTFTRNYNLKKHMKTVHKIDDNEPYFAYENTEYDEEEGEMEGEEFGSLSNSMLEVIIRD***
Disordered Region (DISEMBL)
MQMIISEHIKSHEYVENHMCELCYKVFESRENLMRHLKIHDDKESKRFKCEQCDKRFSSNAELNKHSSAIHQRLKLHECDLCGKNFSQRNNLKRQANGSNVNNRFSSNAELNKHSSAIHQRLKLHECDLCGKNFSQRNNLKRHLEEVHRTDGMKFECYVCSKVLATSHSLKRHLLIHNGPKYTCEICAKEFTRVYELNIHKKLHEDESVANQLKCEFCGKVFLKKSNLKAHIENNHLDYSCLECKAVGEEISFDTKKNLLLHLKTKHKNVISNVYLTCLICFKTFLTEVDLGKHMKMHMDDNQIQCRFCNKYFSRNYNLKQHMKTCTKNVSNGILNCDDNEGEY*************DYDDMNEMMLVPVIKMELK*********************PEVSIKRETDPLSVEDIISAGEVSITPIPQSNTNNHGSGSTNNTQANKIIQCHICLKTFAKKDSLKKHMKVFHTYISPDAIKEESGEGKPNILEVILQEGKVPNNNAIIQCRICSKTFTRKDSLRKHMRRFHIINDTNVKKEFTEGQINRNMLDVILKESGHEIKSRIPCELCYKTFTRKDSLRKHMKIFHTRR************APPAVKL**************************************DNRTSVGPVAPIDRIPCTLCDKTFTRKDSLKKHIRIFHTQNQPQHTNVIEVALGARANAAFIDRIRCELCDKSFTRKDSLKKHNRIFHGGADPKVMDEQMARGSADFLEVVLNEDGEGEPVSITNEILCKICNRTFTRNYNLKKHMKTVHKIDDNEPYFAYENTE*************GSLSNSMLEVIIRDDEQ
Disordered Region (DISPRO)
*QMIISEHIKSHEYVENHMCELCYKVFESRENLMRHLKIHDDKESKRFKCEQCDKRFSSNAELNKHSSAIHQRLKLHECDLCGKNFSQRNNLKRQANGSNVNNRFSSNAELNKHSSAIHQRLKLHECDLCGKNFSQRNNLKRHLEEVHRTDGMKFECYVCSKVLATSHSLKRHLLIHNGPKYTCEICAKEFTRVYELNIHKKLHEDESVANQLKCEFCGKVFLKKSNLKAHIENNHLDYSCLECKAVGEEISFDTKKNLLLHLKTKHKNVISNVYLTCLICFKTFLTEVDLGKHMKMHMDDNQIQCRFCNKYFSRNYNLKQHMKTCTKNVSNGILNCDDNEGEYNGHGSHEENEDDEDYDDMNEMMLVPVIKMELKEENEENEDRENQSEEENYTPVPEVSIKRETDPLSVEDIISAGEVSITPIPQSNTNNHGSGSTNNTQANKIIQCHICLKTFAKKDSLKKHMKVFHTYISPDAIKEESGEGKPNILEVILQEGKVPNNNAIIQCRICSKTFTRKDSLRKHMRRFHIINDTNVKKEFTEGQINRNMLDVILKESGHEIKSRIPCELCYKTFTRKDSLRKHMKIFHTRRNPSANSGNSGTSAPPAVKLEQNGGEKVENSTSVENSTSVENSTSVENSANVENTSSVDNRTSVGPVAPIDRIPCTLCDKTFTRKDSLKKHIRIFHTQNQPQHTNVIEVALGARANAAFIDRIRCELCDKSFTRKDSLKKHNRIFHGGADPKVMDEQMARGSADFLEVVLNEDGEGEPVSITNEILCKICNRTFTRNYNLKKHMKTVHKIDDNEPYFAYENTEYDEEEGEMEGEEFGSLSN*M***II*****
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MQMIISEHIKSHEYVENHMCELCYKVFESRENLMRHLKIHDDKESKRFKCEQCDKRFSSNAELNKHSSAIHQRLKLHECDLCGKNFSQRNNLKRQANGSNVNNRFSSNAELNKHSSAIHQRLKLHECDLCGKNFSQRNNLKRHLEEVHRTDGMKFECYVCSKVLATSHSLKRHLLIHNGPKYTCEICAKEFTRVYELNIHKKLHEDESVANQLKCEFCGKVFLKKSNLKAHIENNHLDYSCLECKAVGEEISFDTKKNLLLHLKTKHKNVISNVYLTCLICFKTFLTEVDLGKHMKMHMDDNQIQCRFCNKYFSRNYNLKQHMKTCTKNVSNGILNCDDNEGEYNGHGSHEENEDDEDYDDMNEMMLVPVIxxxxxxxxxxxxxxxxxxxxxxYTPVPEVSIKRETDPLSVEDIISAGEVSITPIPQSNTNNHGSGSTNNTQANKIIQCHICLKTFAKKDSLKKHMKVFHTYISPDAIKEESGEGKPNILEVILQEGKVPNNNAIIQCRICSKTFTRKDSLRKHMRRFHIINDTNVKKEFTEGQINRNMLDVILKESGHEIKSRIPCELCYKTFTRKDSLRKHMKIFHTRRNPSANSGNSGTSAPPAVKLEQNGGEKVENSTSVENSTSVENSTSVENSANVENTSSVDNRTSVGPVAPIDRIPCTLCDKTFTRKDSLKKHIRIFHTQNQPQHTNVIEVALGARANAAFIDRIRCELCDKSFTRKDSLKKHNRIFHGGADPKVMDEQMARGSADFLEVVLNEDGEGEPVSITNEILCKICNRTFTRNYNLKKHMKTVHKIDDNEPYFAYENTEYDEEEGEMEGEEFGSLSNSMLEVIIRDDEQ
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	843	2.2.26 [Sep-21-2011]
Q05481	1191	Zinc finger protein 91 OS	yes	N/A	0.869	0.615	0.247	3e-34
Q08AN1	781	Zinc finger protein 616 O	no	N/A	0.627	0.677	0.263	3e-34
A6NN14	1173	Zinc finger protein 729 O	no	N/A	0.820	0.589	0.251	6e-34
Q60821	794	Zinc finger and BTB domai	yes	N/A	0.347	0.369	0.307	2e-32
Q8TF20	911	Zinc finger protein 721 O	no	N/A	0.812	0.751	0.253	3e-32
P17020	682	Zinc finger protein 16 OS	no	N/A	0.355	0.439	0.312	3e-32
A1YG88	673	Zinc finger protein 16 OS	N/A	N/A	0.355	0.445	0.312	3e-32
A2T759	682	Zinc finger protein 16 OS	no	N/A	0.355	0.439	0.312	4e-32
Q90625	706	Zinc finger and BTB domai	no	N/A	0.359	0.429	0.3	4e-32
A1YF12	682	Zinc finger protein 16 OS	N/A	N/A	0.355	0.439	0.312	4e-32

>sp|Q05481|ZNF91_HUMAN Zinc finger protein 91 OS=Homo sapiens GN=ZNF91 PE=2 SV=2

 Score =  147 bits (372), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 215/867 (24%), Positives = 322/867 (37%), Gaps = 134/867 (15%)

Query: 5    ISEHIKSHEYVENHMCELCYKVFESRENLMRHLKIHDDK--------------------- 43
            +++H + H   + + CE C K F     L +H +IH  +                     
Sbjct: 309  LAKHKRIHTGEKPYKCEECGKAFSRSSTLAKHKRIHTGEKPYKCKECGKAFSNSSTLANH 368

Query: 44   -----ESKRFKCEQCDKRFSSNAELNKHSSAIHQRLKLHECDLCGKNFSQRNNL------ 92
                 E K +KC++CDK F   + L KH   IH   KL++C+ CGK F++ +NL      
Sbjct: 369  KITHTEEKPYKCKECDKAFKRLSTLTKH-KIIHAGEKLYKCEECGKAFNRSSNLTIHKFI 427

Query: 93   ---KRQANGSNVNNRFSSNAELNKHSSAIHQRLKLHECDLCGKNFSQRNNLKRHLEEVHR 149
               ++          F+ ++ L KH    H R K  +C  CGK F   + L RH + +H 
Sbjct: 428  HTGEKPYKCEECGKAFNWSSSLTKHKR-FHTREKPFKCKECGKAFIWSSTLTRH-KRIH- 484

Query: 150  TDGMKFECYVCSKVLATSHSLKRHLLIHNGPK-YTCEICAKEFTRVYELNIHKKLHEDES 208
            T    ++C  C K    S +L +H +IH G K Y  E C K F +   LN HK +H  E 
Sbjct: 485  TGEKPYKCEECGKAFRQSSTLTKHKIIHTGEKPYKFEECGKAFRQSLTLNKHKIIHSRE- 543

Query: 209  VANQLKCEFCGKVFLKKSNLKAH--IENNHLDYSCLEC-KAVGEEISFDTKKNLLLHLKT 265
                 KC+ CGK F + S L  H  I      Y C EC KA     S  T K  ++H   
Sbjct: 544  --KPYKCKECGKAFKQFSTLTTHKIIHAGKKLYKCEECGKAFNHSSSLSTHK--IIHTGE 599

Query: 266  KHKNVISNVYLTCLICFKTFLTEVDLGKHMKMHMDDNQIQCRFCNKYFSRNYNLKQHMKT 325
            K           C  C K FL    L +H ++H  +   +C  C K FS +  L +H + 
Sbjct: 600  KS--------YKCEECGKAFLWSSTLRRHKRIHTGEKPYKCEECGKAFSHSSALAKHKRI 651

Query: 326  CTKNVSNGILNCDDNEGEYNGHGSHEENEDDEDYDDMNEMMLVPVIKMELKEENEENEDR 385
                              + G   ++  E  + + + + +    +   E K    +  D+
Sbjct: 652  ------------------HTGEKPYKCKECGKAFSNSSTLANHKITHTEEKPYKCKECDK 693

Query: 386  ENQSEEENYTPVPEVSIKRETDPLSVEDIISAGEVSITPIPQSNTNNHGSGSTNNT---Q 442
                           + KR    L+   II AGE            N  S  T +     
Sbjct: 694  ---------------TFKR-LSTLTKHKIIHAGEKLYKCEECGKAFNRSSNLTIHKFIHT 737

Query: 443  ANKIIQCHICLKTFAKKDSLKKHMKVFHTYISPDAIKEESGEGKPNILEVILQEGK-VPN 501
              K  +C  C K F    SL KH ++ HT   P   KE    GK  I    L   K +  
Sbjct: 738  GEKPYKCEECGKAFNWSSSLTKHKRI-HTREKPFKCKE---CGKAFIWSSTLTRHKRIHT 793

Query: 502  NNAIIQCRICSKTFTRKDSLRKHMRRFHIINDTNVKKEFTEGQINRNMLDVILKESGHEI 561
                 +C  C K F+R  +L KH +  H        KE   G+  ++   +   +  H  
Sbjct: 794  GEKPYKCEECGKAFSRSSTLTKH-KTIHTGEKPYKCKEC--GKAFKHSSALAKHKIIHAG 850

Query: 562  KSRIPCELCYKTFTRKDSLRKHMKIFHTRRNPSANSGNSGTSAPPAVKLEQNGGEKVENS 621
            +    CE C K F +  +L  H KI HT+  PS +          +   E       E +
Sbjct: 851  EKLYKCEECGKAFNQSSNLTTH-KIIHTKEKPSKSEECDKAFIWSSTLTEHKRIHTREKT 909

Query: 622  TSVENS----------TSVENSTSVENSANVENTSSVDNRTSVGPVAPI-----DRIPCT 666
               E            T+ +   + E     E      +++S      I         C 
Sbjct: 910  YKCEECGKAFSQPSHLTTHKRMHTGEKPYKCEECGKAFSQSSTLTTHKIIHTGEKPYKCE 969

Query: 667  LCDKTFTRKDSLKKHIRIFHTQNQPQHTNVIEVALGARANAAFIDRI-------RCELCD 719
             C K F +  +L +H +I HT  +P        A    +      R+       +CE C 
Sbjct: 970  ECGKAFRKSSTLTEH-KIIHTGEKPYKCEECGKAFSQSSTLTRHTRMHTGEKPYKCEECG 1028

Query: 720  KSFTRKDSLKKHNRIFHGGADPKVMDEQMARGSADFLEVVLNEDGEGEPVSITNEILCKI 779
            K+F R   L  H +I H G  P   +E    G A      LN  G     +      C+ 
Sbjct: 1029 KAFNRSSKLTTH-KIIHTGEKPYKCEEC---GKAFISSSTLN--GHKRIHTREKPYKCEE 1082

Query: 780  CNRTFTRNYNLKKHMKTVHKIDDNEPY 806
            C + F+++  L +H K +H     +PY
Sbjct: 1083 CGKAFSQSSTLTRH-KRLH--TGEKPY 1106

Homo sapiens (taxid: 9606)

>sp|Q08AN1|ZN616_HUMAN Zinc finger protein 616 OS=Homo sapiens GN=ZNF616 PE=2 SV=2

 Score =  147 bits (372), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 166/631 (26%), Positives = 258/631 (40%), Gaps = 102/631 (16%)

Query: 4   IISEHIKSHEYVENHMCELCYKVFESRENLMRHLKIHDDKESKRFKCEQCDKRFSSNAEL 63
           ++S HI+   YV    C  C K F++  +L+ H +IH  +  K +KC +C K F   + L
Sbjct: 175 LVSPHIREKTYV----CNECGKAFKASSSLINHQRIHTTE--KPYKCNECGKAFHRASLL 228

Query: 64  NKHSSAIHQRLKLHECDLCGKNFSQRNNLKRQANGSNVNNRFSSNAELNKHSS-----AI 118
             H   +H R K ++CD+CGK F + +   R          +  N E  K  S     A+
Sbjct: 229 TVHK-VVHTRGKSYQCDVCGKIFRKNSYFVRHQRSHTGQKPYICN-ECGKSFSKSSHLAV 286

Query: 119 HQRL----KLHECDLCGKNFSQRNNLKRHLEEVHRTDGMKFECYVCSKVLATSHSLKRHL 174
           HQR+    K ++C+LCGK+FSQR +L+ H + VH T    F+C  C K    S +L  H 
Sbjct: 287 HQRIHTGEKPYKCNLCGKSFSQRVHLRLH-QTVH-TGERPFKCNECGKTFKRSSNLTVHQ 344

Query: 175 LIHNGPK-YTCEICAKEFTRVYELNIHKKLHEDESVANQLKCEFCGKVFLKKSNLKAHIE 233
           +IH G K Y C++C K F     L  H+++H  E    Q KC  CGKVF K+S+L  H  
Sbjct: 345 VIHAGKKPYKCDVCGKAFRHRSNLVCHRRIHSGE---KQYKCNECGKVFSKRSSLAVHRR 401

Query: 234 NNHLDYSCLECKAVGEEISFDTKKNLLLHL------KTKHKNVISNVY------------ 275
            + ++  C +C   G+   F  + +L +H       KT   N    VY            
Sbjct: 402 IHTVEKPC-KCNECGK--VFSKRSSLAVHQRIHTGQKTYKCNKCGKVYSKHSHLAVHWRI 458

Query: 276 ------LTCLICFKTFLTEVDLGKHMKMHMDDNQIQCRFCNKYFSRNYNLKQHMKTCTKN 329
                   C  C K F     L  H ++H  +   +C  C K FS++  L  H +     
Sbjct: 459 HTGEKAYKCNECGKVFSIHSRLAAHQRIHTGEKPYKCNECGKVFSQHSRLAVHRRI---- 514

Query: 330 VSNGILNCDDNEGEYNGHGSHEENEDDEDYDDMNEMMLVPVIKMELKEENEENEDRENQS 389
                         + G   ++  E  + + D +                     R   +
Sbjct: 515 --------------HTGEKPYKCKECGKVFSDRSAFA----------------RHRRIHT 544

Query: 390 EEENYTPVPEVSIKRETDPLSVEDIISAGEVSITPIPQSNTN------NHGSGSTNNTQA 443
            E+ Y       +  +   L+V   I +GE    P   +         +H  G       
Sbjct: 545 GEKPYKCKECGKVFSQCSRLTVHRRIHSGE---KPYKCNECGKVYSQYSHLVGHRRVHTG 601

Query: 444 NKIIQCHICLKTFAKKDSLKKHMKVFHTYISPDAIKEESGEGKPNILEVILQEGKVPNNN 503
            K  +CH C K F +  +L +H ++ HT   P     + G      + + L +  V   +
Sbjct: 602 EKPYKCHECGKAFNQGSTLNRHQRI-HTGEKPYKC-NQCGNSFSQRVHLRLHQ-TVHTGD 658

Query: 504 AIIQCRICSKTFTRKDSLRKHMRRFHIINDTNVKKEFTE-GQINRNMLDVILKESGHEIK 562
              +C  C KTF R  +L  H     II+      +  E G++ R+   ++  +  H  +
Sbjct: 659 RPYKCNECGKTFKRSSNLTAHQ----IIHAGKKPYKCDECGKVFRHSSHLVSHQRIHTGE 714

Query: 563 SRIPCELCYKTFTRKDSLRKHMKIFHTRRNP 593
            R  C  C K F R  SL KH +I H+ + P
Sbjct: 715 KRYKCIECGKAFGRLFSLSKHQRI-HSGKKP 744

May be involved in transcriptional regulation.

Homo sapiens (taxid: 9606)

>sp|A6NN14|ZN729_HUMAN Zinc finger protein 729 OS=Homo sapiens GN=ZNF729 PE=2 SV=3

 Score =  146 bits (369), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 207/822 (25%), Positives = 310/822 (37%), Gaps = 130/822 (15%)

Query: 20   CELCYKVFESRENLMRHLKIHDDKESKRFKCEQCDKRFSSNAELNKHSSAIHQRLKLHEC 79
            CE C K F     L +H  IH  K  K +KCE+C K F+S++ L KH   IH   K ++C
Sbjct: 406  CEECGKAFSQFSTLKKHKIIHTGK--KPYKCEECGKAFNSSSTLMKHK-IIHTGEKPYKC 462

Query: 80   DLCGKNFSQRNNLKRQANGSNVNNRFSSNAELNKHSSAIHQRLKLHECDLCGKNFSQRNN 139
            + CGK F Q ++L R                      AIH   K ++C+ CGK F+  ++
Sbjct: 463  EECGKAFRQSSHLTRH--------------------KAIHTGEKPYKCEECGKAFNHFSD 502

Query: 140  LKRHLEEVHRTDGMKFECYVCSKVLATSHSLKRHLLIHNGPK-YTCEICAKEFTRVYELN 198
            L+RH  ++  T    ++C  C K  + S +L+ H +IH G K Y CE C K F    +L 
Sbjct: 503  LRRH--KIIHTGKKPYKCEECGKAFSQSSTLRNHQIIHTGEKPYKCEECGKAFKWSSKLT 560

Query: 199  IHKKLHEDESVANQLKCEFCGKVFLKKSNLKAH--IENNHLDYSCLECKAVGEEISFDTK 256
            +HK +H  E      KCE CGK F   S L+ H  I      Y C EC       S   K
Sbjct: 561  VHKVIHTGE---KPCKCEECGKAFKHFSALRKHKVIHTREKLYKCEECGKAFNNSSILAK 617

Query: 257  KNLLLHLKTKHKNVISNVYLTCLICFKTFLTEVDLGKHMKMHMDDNQIQCRFCNKYFSRN 316
              ++   K  +K         C  C K F     L +H  +H  +   +C  C K FS  
Sbjct: 618  HKIIHTGKKPYK---------CEECGKAFRQSSHLTRHKAIHTGEKPYKCEECGKAFSHF 668

Query: 317  YNLKQHMKTCTKNVSNGILNCDDNEGEYNGHGSHEENEDDEDYDDMNEMMLVPVIKMELK 376
              L++H           I+        + G   ++  E  + +   + +    +I     
Sbjct: 669  SALRRHK----------II--------HTGKKPYKCEECGKAFSHFSALRRHKII----- 705

Query: 377  EENEENEDRENQSEEENYTPVPEVSIKRETDPLSVEDIISAGEVSITPIPQSNTNNHGSG 436
                        + E+ Y         + +  L+V  +I   E          +  H S 
Sbjct: 706  -----------HTGEKPYKCEECGKAFKWSSKLTVHKVIHTAEKPCKCEECGKSFKHFSA 754

Query: 437  STNNT---QANKIIQCHICLKTFAKKDSLKKHMKVFHTYISPDAIKEESGEGKPN---IL 490
               +       K+ +C  C+K F    +L KH KV HT   P   +E     K +    +
Sbjct: 755  LRKHKVIHTREKLYKCEECVKAFNSFSALMKH-KVIHTGEKPYKCEECGKAFKWSSKLTV 813

Query: 491  EVILQEGKVPNNNAIIQCRICSKTFTRKDSLRKHMRRFHIINDTNVKKEFTE-GQINRNM 549
              ++  G+ P      +C  C K F    +LRKH     II+      +  E G+     
Sbjct: 814  HKVIHTGEKP-----CKCEECGKAFKHFSALRKHK----IIHTGEKPYKCEECGKAFHQS 864

Query: 550  LDVILKESGHEIKSRIPCELCYKTFTRKDSLRKHMKIFHTRRNPSA---------NSGNS 600
              +   +  H  +    CE C K F R   L  H KI HT + P            S N 
Sbjct: 865  SKLAKHKKIHTGEKPYKCEECGKAFNRLSHLTTH-KIIHTGKKPYKCEECGKAFNQSANL 923

Query: 601  GT-----SAPPAVKLEQNGGEKVENSTSVENST--SVENSTSVENSANVENTSSVDNRTS 653
             T     +     K E+ G    ++ST   +    + E     E      + SS      
Sbjct: 924  TTHKRIHTGEKPYKCEECGRAFSQSSTLTAHKIIHAGEKPYKCEECGKAFSQSSTLTTHK 983

Query: 654  VGPVAPIDRIPCTLCDKTFTRKDSLKKHIRIFHTQNQPQHTNVIEVALGARANAAFIDRI 713
            +          C  C K F++   L  H RI H+  +P        A    +      RI
Sbjct: 984  IIHTGE-KFYKCEECGKAFSQLSHLTTHKRI-HSGEKPYKCEECGKAFKQSSTLTTHKRI 1041

Query: 714  -------RCELCDKSFTRKDSLKKHNRIFHGGADPKVMDE--QMARGSADFLEVVLNEDG 764
                   +CE+C K+F+R   L  H RI H G  P   +E  +    S+      +   G
Sbjct: 1042 HAGEKFYKCEVCSKAFSRFSHLTTHKRI-HTGEKPYKCEECGKAFNLSSQLTTHKIIHTG 1100

Query: 765  EGEPVSITNEILCKICNRTFTRNYNLKKHMKTVHKIDDNEPY 806
            E +P        C+ C + F ++  L KH K +H     +PY
Sbjct: 1101 E-KPYK------CEECGKAFNQSSTLSKH-KVIH--TGEKPY 1132

May be involved in transcriptional regulation.

Homo sapiens (taxid: 9606)

>sp|Q60821|ZBT17_MOUSE Zinc finger and BTB domain-containing protein 17 OS=Mus musculus GN=Zbtb17 PE=1 SV=2

 Score =  141 bits (356), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 106/345 (30%), Positives = 156/345 (45%), Gaps = 52/345 (15%)

Query: 18  HMCELCYKVFESRENLMRHLKIHDDKESKRFKCEQCDKRFSSNAELNKHSSAIHQRLKLH 77
           H CE C K F    N  RH++IH  +  K F C +C K FS  A    H    H  LK +
Sbjct: 297 HKCEDCGKEFTHTGNFKRHIRIHTGE--KPFSCRECSKAFSDPAACKAHEK-THSPLKPY 353

Query: 78  ECDLCGKNF---SQRNNLKRQANG------SNVNNRFSSNAELNKHSSAIHQRLKLHECD 128
            C+ CGK++   S  N  K++ +G       +    F+++  L +H   +H   K ++CD
Sbjct: 354 GCEECGKSYRLISLLNLHKKRHSGEARYRCGDCGKLFTTSGNLKRHQ-LVHSGQKPYQCD 412

Query: 129 LCGKNFSQRNNLKRHLE---------------------------EVHRTDGMKFECYVCS 161
            CG++FS   +  RHLE                           ++H  DG   +C  C 
Sbjct: 413 YCGRSFSDPTSKMRHLETHDTDKEHKCPHCDKKFNQVGNLKAHLKIHIADG-PLKCRECG 471

Query: 162 KVLATSHSLKRHLLIHNGPK-YTCEICAKEFTRVYELNIHKKLHEDESVANQLKCEFCGK 220
           K   TS +LKRHL IH+G K Y C  C ++F     L  H ++H  E      +C  CGK
Sbjct: 472 KQFTTSGNLKRHLRIHSGEKPYVCTHCQRQFADPGALQRHVRIHTGE---KPCQCVICGK 528

Query: 221 VFLKKSNLKAHIENNHLDYSCLECKAVGEEISFDTKKNLLLHLKTKHKNVISNVYLTCLI 280
            F + S+L AH+   H       C+  G+   F     L  H++  H N+  +    C +
Sbjct: 529 AFTQASSLIAHV-RQHTGEKPYVCERCGKR--FVQSSQLANHIR-HHDNIRPH---KCSV 581

Query: 281 CFKTFLTEVDLGKHMKMHMDDNQIQCRFCNKYFSRNYNLKQHMKT 325
           C K F+   DL KH+ +H  +    C  C + F+R  NL+ H+KT
Sbjct: 582 CSKAFVNVGDLSKHIIIHTGEKPYLCDKCGRGFNRVDNLRSHVKT 626

May function as a housekeeping DNA-binding protein that regulates the expression of specific genes. Has been shown to bind to the promoters of adenovirus major late protein and cyclin D1 and activate transcription. Also has potent growth arrest activity, probably through inhibition of cell cycle progression (By similarity). Required for early embryonic development during gastrulation.

Mus musculus (taxid: 10090)

>sp|Q8TF20|ZN721_HUMAN Zinc finger protein 721 OS=Homo sapiens GN=ZNF721 PE=2 SV=2

 Score =  141 bits (355), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 213/840 (25%), Positives = 301/840 (35%), Gaps = 155/840 (18%)

Query: 5   ISEHIKSHEYVENHMCELCYKVFESRENLMRHLKIHDDKES------------------- 45
           +++H K H   + + CE C K F    NL  H +IH+ +++                   
Sbjct: 140 LNQHKKIHTGEKPYKCEECGKAFNRSTNLTAHKRIHNREKAYTGEDRDRAFGWSTNLNEY 199

Query: 46  -------KRFKCEQCDKRFSSNAELNKHSSAIHQRLKLHECDLCGKNFSQRNNL---KRQ 95
                  K +KC++C K F  ++ LNKH   IH   K ++C  CGK  S  ++    KR 
Sbjct: 200 KKIHTGDKPYKCKECGKAFMHSSHLNKHEK-IHTGEKPYKCKECGKVISSSSSFAKHKRI 258

Query: 96  ANGSN------VNNRFSSNAELNKHSSAIHQRLKLHECDLCGKNFSQRNNLKRHLEEVHR 149
             G            F+ +  L KH   IH   K + C++CGK F Q  NL  H   +H 
Sbjct: 259 HTGEKPFKCLECGKAFNISTTLTKHRR-IHTGEKPYTCEVCGKAFRQSANLYVH-RRIH- 315

Query: 150 TDGMKFECYVCSKVLATSHSLKRHLLIHNGPK-YTCEICAKEFTRVYELNIHKKLHEDES 208
           T    + C  C K    S +L  H  IH G K Y CE C K F R   LN HKK+H  E 
Sbjct: 316 TGEKPYTCGECGKTFRQSANLYVHRRIHTGEKPYKCEDCGKAFGRYTALNQHKKIHTGE- 374

Query: 209 VANQLKCEFCGKVFLKKSNLKAH--IENNHLDYSCLECKAVGEEISFDTKKNLLLHLKTK 266
                KCE CGK F   +NL AH  I      Y+C +    G      T  N    + T 
Sbjct: 375 --KPYKCEECGKAFNSSTNLTAHKRIHTREKPYTCED---RGRAFGLSTNLNEYKKIHTG 429

Query: 267 HKNVISNVYLTCLICFKTFLTEVDLGKHMKMHMDDNQIQCRFCNKYFSRNYNLKQHMKTC 326
            K         C  C K F+  + L KH K+H      +C+ C K  + + +  +H +  
Sbjct: 430 DKP------YKCKECGKAFIHSLHLNKHEKIHTGKKPYKCKQCGKVITSSSSFAKHKRIH 483

Query: 327 TKNVSNGILNCDDNEGEYNGHGSHEENEDDEDYDDMNEMMLVPVIKMELKEENEENEDRE 386
           T       L C            H      E      +     V     ++       R 
Sbjct: 484 TGEKPFECLECGKAFTSSTTLTKHRRIHTGE------KPYTCEVCGKAFRQSAILYVHRR 537

Query: 387 NQSEEENYTPVPEVSIKRETDPLSVEDIISAGEVSITPIPQSNTNNHGSGSTNNTQANKI 446
             + E+ YT        R++  L V   I  GE                         K 
Sbjct: 538 IHTGEKPYTCEECGKTFRQSANLYVHRRIHTGE-------------------------KP 572

Query: 447 IQCHICLKTFAKKDSLKKHMKVFHTYISPDAIKEESGEGKPNILEVIL-QEGKVPNNNAI 505
            +C  C K F +   L +H K+ HT    + + +    GK  +    L Q+ K+      
Sbjct: 573 YKCEECGKAFGRYTDLNQHKKI-HT---GEKLYKCEECGKDFVWYTDLNQQKKIYTGEKP 628

Query: 506 IQCRICSKTFTRKDSLRKHMRRFHIINDTNVKKEFTEGQINRNMLDVILKESGHEIKSRI 565
            +C  C K F     L +H +   I+      K    G+     + +   +  H  +   
Sbjct: 629 YKCEECGKAFAPSTDLNQHTK---ILTGEQSYKCEECGKAFGWSIALNQHKKIHTGEKPY 685

Query: 566 PCELCYKTFTRKDSLRKHMKIFHTRRNPSANSGNSGTSAPPAVKLEQNGGEKVENSTSVE 625
            CE C K F+R  +L  H ++ HTR  P               K E   G     ST++ 
Sbjct: 686 KCEECGKAFSRSRNLTTHRRV-HTREKP--------------YKCEDR-GRSFGWSTNLN 729

Query: 626 NSTSVENSTSV---ENSANVENTSSVDNR-----TSVGPVAPIDRIPCTLCDKTFTRKDS 677
               +     +   +    V   SS  NR     T   P        C  C K  T   S
Sbjct: 730 EYKKIHTGDKLYKCKECGKVFKQSSHLNRHEKIHTGKKPYK------CKECGKVITSSSS 783

Query: 678 LKKHIRIFHTQNQPQHTNVIEVALGARANAAFIDRIRCELCDKSFTRKDSLKKHNRIFHG 737
             KH RI HT  +P                      +C  C K+FT   +L KH RI H 
Sbjct: 784 FAKHKRI-HTGEKP---------------------FKCLECGKAFTSSTTLTKHRRI-HT 820

Query: 738 GADPKVMDE--QMARGSADFLEVVLNEDGEGEPVSITNEILCKICNRTFTRNYNLKKHMK 795
           G  P   +E  +  R SA          GE +P +      C  C +TF ++ NL  H K
Sbjct: 821 GEKPYTCEECGKAFRQSAILYVHRRIHTGE-KPYT------CGECGKTFRQSANLYAHKK 873

May be involved in transcriptional regulation.

Homo sapiens (taxid: 9606)

>sp|P17020|ZNF16_HUMAN Zinc finger protein 16 OS=Homo sapiens GN=ZNF16 PE=1 SV=3

 Score =  140 bits (354), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 103/330 (31%), Positives = 156/330 (47%), Gaps = 30/330 (9%)

Query: 7   EHIKSHEYVENHMCELCYKVFESRENLMRHLKIHDDKESKRFKCEQCDKRFSSNAELNKH 66
           +H + H   + ++C  C K F    NL++H + H  +  K F+C +C K FS +A L KH
Sbjct: 338 QHQRIHSGEKPYVCSECGKAFRRSSNLIKHHRTHTGE--KPFECGECGKAFSQSAHLRKH 395

Query: 67  SSAIHQRLKLHECDLCGKNFSQRNNL---------KRQANGSNVNNRFSSNAELNKHSSA 117
              +H   K +EC+ CGK FS+ +NL         ++    S+    FS ++ L +H   
Sbjct: 396 QR-VHTGEKPYECNDCGKPFSRVSNLIKHHRVHTGEKPYKCSDCGKAFSQSSSLIQHRR- 453

Query: 118 IHQRLKLHECDLCGKNFSQRNNLKRHLEEVHRTDGMKFECYVCSKVLATSHSLKRHLLIH 177
           IH   K H C++CGK FS  + L++H  ++  T    + C VC K  + S +L +H  +H
Sbjct: 454 IHTGEKPHVCNVCGKAFSYSSVLRKH--QIIHTGEKPYRCSVCGKAFSHSSALIQHQGVH 511

Query: 178 NGPK-YTCEICAKEFTRVYELNIHKKLHEDESVANQLKCEFCGKVFLKKSNLKAH--IEN 234
            G K Y C  C K F R   L +H+++H  E      +C  CGK F + S L  H  I N
Sbjct: 512 TGDKPYACHECGKTFGRSSNLILHQRVHTGE---KPYECTECGKTFSQSSTLIQHQRIHN 568

Query: 235 NHLDYSCLECKAVGEEISFDTKKNLLLHLKTKHKNVISNVYLTCLICFKTFLTEVDLGKH 294
               + C +C       +F+   NL+ H K            TC+ C K F     L +H
Sbjct: 569 GLKPHECNQCGK-----AFNRSSNLIHHQKVH----TGEKPYTCVECGKGFSQSSHLIQH 619

Query: 295 MKMHMDDNQIQCRFCNKYFSRNYNLKQHMK 324
             +H  +   +C  C K FS+   L QH +
Sbjct: 620 QIIHTGERPYKCSECGKAFSQRSVLIQHQR 649

May be involved in transcriptional regulation.

Homo sapiens (taxid: 9606)

>sp|A1YG88|ZNF16_PANPA Zinc finger protein 16 OS=Pan paniscus GN=ZNF16 PE=3 SV=1

 Score =  140 bits (354), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 103/330 (31%), Positives = 156/330 (47%), Gaps = 30/330 (9%)

Query: 7   EHIKSHEYVENHMCELCYKVFESRENLMRHLKIHDDKESKRFKCEQCDKRFSSNAELNKH 66
           +H + H   + ++C  C K F    NL++H + H  +  K F+C +C K FS +A L KH
Sbjct: 329 QHQRIHSGEKPYVCSECGKAFRRSSNLIKHHRTHTGE--KPFECGECGKAFSQSAHLRKH 386

Query: 67  SSAIHQRLKLHECDLCGKNFSQRNNL---------KRQANGSNVNNRFSSNAELNKHSSA 117
              +H   K +EC+ CGK FS+ +NL         ++    S+    FS ++ L +H   
Sbjct: 387 QR-VHTGEKPYECNDCGKPFSRVSNLIKHHRVHTGEKPYKCSDCGKAFSQSSSLIQHRR- 444

Query: 118 IHQRLKLHECDLCGKNFSQRNNLKRHLEEVHRTDGMKFECYVCSKVLATSHSLKRHLLIH 177
           IH   K H C++CGK FS  + L++H  ++  T    + C VC K  + S +L +H  +H
Sbjct: 445 IHTGEKPHVCNVCGKAFSYSSVLRKH--QIIHTGEKPYRCSVCGKAFSHSSALIQHQGVH 502

Query: 178 NGPK-YTCEICAKEFTRVYELNIHKKLHEDESVANQLKCEFCGKVFLKKSNLKAH--IEN 234
            G K Y C  C K F R   L +H+++H  E      +C  CGK F + S L  H  I N
Sbjct: 503 TGDKPYACHECGKTFGRSSNLILHQRVHTGE---KPYECTECGKTFSQSSTLIQHQRIHN 559

Query: 235 NHLDYSCLECKAVGEEISFDTKKNLLLHLKTKHKNVISNVYLTCLICFKTFLTEVDLGKH 294
               + C +C       +F+   NL+ H K            TC+ C K F     L +H
Sbjct: 560 GLKPHECNQCGK-----AFNRSSNLIHHQKVH----TGEKPYTCVECGKGFSQSSHLIQH 610

Query: 295 MKMHMDDNQIQCRFCNKYFSRNYNLKQHMK 324
             +H  +   +C  C K FS+   L QH +
Sbjct: 611 QIIHTGERPYKCSECGKAFSQRSVLIQHQR 640

May be involved in transcriptional regulation.

Pan paniscus (taxid: 9597)

>sp|A2T759|ZNF16_PANTR Zinc finger protein 16 OS=Pan troglodytes GN=ZNF16 PE=3 SV=1

 Score =  140 bits (353), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 103/330 (31%), Positives = 156/330 (47%), Gaps = 30/330 (9%)

Query: 7   EHIKSHEYVENHMCELCYKVFESRENLMRHLKIHDDKESKRFKCEQCDKRFSSNAELNKH 66
           +H + H   + ++C  C K F    NL++H + H  +  K F+C +C K FS +A L KH
Sbjct: 338 QHQRIHSGEKPYVCSECGKAFRRSSNLIKHHRTHTGE--KPFECGECGKAFSQSAHLRKH 395

Query: 67  SSAIHQRLKLHECDLCGKNFSQRNNL---------KRQANGSNVNNRFSSNAELNKHSSA 117
              +H   K +EC+ CGK FS+ +NL         ++    S+    FS ++ L +H   
Sbjct: 396 QR-VHTGEKPYECNDCGKPFSRVSNLIKHHRVHTGEKPYKCSDCGKXFSQSSSLIQHRR- 453

Query: 118 IHQRLKLHECDLCGKNFSQRNNLKRHLEEVHRTDGMKFECYVCSKVLATSHSLKRHLLIH 177
           IH   K H C++CGK FS  + L++H  ++  T    + C VC K  + S +L +H  +H
Sbjct: 454 IHTGEKPHVCNVCGKAFSYSSVLRKH--QIIHTGEKPYRCSVCGKAFSHSSALIQHQGVH 511

Query: 178 NGPK-YTCEICAKEFTRVYELNIHKKLHEDESVANQLKCEFCGKVFLKKSNLKAH--IEN 234
            G K Y C  C K F R   L +H+++H  E      +C  CGK F + S L  H  I N
Sbjct: 512 TGDKPYACHECGKTFGRSSNLILHQRVHTGE---KPYECTECGKTFSQSSTLIQHQRIHN 568

Query: 235 NHLDYSCLECKAVGEEISFDTKKNLLLHLKTKHKNVISNVYLTCLICFKTFLTEVDLGKH 294
               + C +C       +F+   NL+ H K            TC+ C K F     L +H
Sbjct: 569 GLKPHECNQCGK-----AFNRSSNLIHHQKVH----TGEKPYTCVECGKGFSQSSHLIQH 619

Query: 295 MKMHMDDNQIQCRFCNKYFSRNYNLKQHMK 324
             +H  +   +C  C K FS+   L QH +
Sbjct: 620 QIIHTGERPYKCSECGKAFSQRSVLIQHQR 649

May be involved in transcriptional regulation.

Pan troglodytes (taxid: 9598)

>sp|Q90625|ZBT17_CHICK Zinc finger and BTB domain-containing protein 17 (Fragment) OS=Gallus gallus GN=ZBTB17 PE=2 SV=1

 Score =  140 bits (353), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 108/360 (30%), Positives = 158/360 (43%), Gaps = 57/360 (15%)

Query: 6   SEHIKSHEYVE-NHMCELCYKVFESRENLMRHLKIHDDKESKRFKCEQCDKRFSSNAELN 64
           S+  +S  Y    H CE C K F    N  RH++IH  +  K F C +C+K FS  A   
Sbjct: 192 SDRTESKAYAAVTHKCEDCGKEFTHTGNFKRHIRIHTGE--KPFSCRECNKAFSDPAACK 249

Query: 65  KHSSAIHQRLKLHECDLCGKNF---SQRNNLKRQANG------SNVNNRFSSNAELNKHS 115
            H    H  LK + C+ CGK++   S  N  K++  G       +    F+++  L +H 
Sbjct: 250 AHEK-THSPLKPYGCEECGKSYRLISLLNLHKKRHTGEAKYRCDDCGKLFTTSGNLKRHQ 308

Query: 116 SAIHQRLKLHECDLCGKNFSQRNNLKRHLE---------------------------EVH 148
             +H   K ++CD CG++FS   +  RHLE                           ++H
Sbjct: 309 -LVHSGEKPYQCDYCGRSFSDPTSKMRHLETHDTDKEHKCPHCDKKFNQVGNLKAHLKIH 367

Query: 149 RTDGMKFECYVCSKVLATSHSLKRHLLIHNGPK-YTCEICAKEFTRVYELNIHKKLHEDE 207
             DG   +C  C     TS +LKRHL IH+G K Y C  C ++F     L  H  +H  E
Sbjct: 368 IADG-PLKCRECGNEFTTSGNLKRHLRIHSGEKPYVCVHCQRQFADPGALQAHVPIHTGE 426

Query: 208 SVANQLKCEFCGKVFLKKSNLKAHI--ENNHLDYSCLECKAVGEEISFDTKKNLLLHLKT 265
                 +C  CGK F + S+L AH+  +     Y C  C        F     L  H++ 
Sbjct: 427 ---KPCQCLICGKAFTQASSLIAHVRHDTGEKPYVCERCGK-----RFVQSSQLANHIR- 477

Query: 266 KHKNVISNVYLTCLICFKTFLTEVDLGKHMKMHMDDNQIQCRFCNKYFSRNYNLKQHMKT 325
            H N+  +    C +C K F+   DL KH+ +H  +    C  C + F+R  NL+ H+KT
Sbjct: 478 HHDNIRPH---KCTVCNKAFVNVGDLSKHIIIHTGEKPFLCDKCGRGFNRVDNLRSHVKT 534

Gallus gallus (taxid: 9031)

>sp|A1YF12|ZNF16_GORGO Zinc finger protein 16 OS=Gorilla gorilla gorilla GN=ZNF16 PE=3 SV=1

 Score =  140 bits (353), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 103/330 (31%), Positives = 156/330 (47%), Gaps = 30/330 (9%)

Query: 7   EHIKSHEYVENHMCELCYKVFESRENLMRHLKIHDDKESKRFKCEQCDKRFSSNAELNKH 66
           +H + H   + ++C  C K F    NL++H + H  +  K F+C +C K FS +A L KH
Sbjct: 338 QHQRIHSGEKPYVCSECGKAFRRSSNLIKHHRTHTGE--KPFECGECGKAFSQSAHLRKH 395

Query: 67  SSAIHQRLKLHECDLCGKNFSQRNNL---------KRQANGSNVNNRFSSNAELNKHSSA 117
              +H   K +EC+ CGK FS+ +NL         ++    S+    FS ++ L +H   
Sbjct: 396 QR-VHTGEKPYECNDCGKPFSRVSNLIKHHRVHTGEKPYKCSDCGKAFSQSSSLIQHRR- 453

Query: 118 IHQRLKLHECDLCGKNFSQRNNLKRHLEEVHRTDGMKFECYVCSKVLATSHSLKRHLLIH 177
           IH   K H C++CGK FS  + L++H  ++  T    + C VC K  + S +L +H  +H
Sbjct: 454 IHTGEKPHVCNICGKAFSYSSVLRKH--QIIHTGEKPYRCSVCGKAFSHSSALIQHQGVH 511

Query: 178 NGPK-YTCEICAKEFTRVYELNIHKKLHEDESVANQLKCEFCGKVFLKKSNLKAH--IEN 234
            G K Y C  C K F R   L +H+++H  E      +C  CGK F + S L  H  I N
Sbjct: 512 TGDKPYACHECGKTFGRSSNLILHQRVHTGE---KPYECTECGKTFSQSSTLIQHQRIHN 568

Query: 235 NHLDYSCLECKAVGEEISFDTKKNLLLHLKTKHKNVISNVYLTCLICFKTFLTEVDLGKH 294
               + C +C       +F+   NL+ H K            TC+ C K F     L +H
Sbjct: 569 GLKPHECNQCGK-----AFNRSSNLIHHQKVH----TGEKPYTCVECGKGFSQSSHLIQH 619

Query: 295 MKMHMDDNQIQCRFCNKYFSRNYNLKQHMK 324
             +H  +   +C  C K FS+   L QH +
Sbjct: 620 QIIHTGERPYKCSECGKAFSQRSVLIQHQR 649

May be involved in transcriptional regulation.

Gorilla gorilla gorilla (taxid: 9595)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	843
334328883	1289	PREDICTED: zinc finger protein 850-like	0.819	0.536	0.276	2e-46
326680667	1782	PREDICTED: zinc finger protein 729-like	0.848	0.401	0.267	8e-45
326667465	2943	PREDICTED: hypothetical protein LOC57172	0.865	0.248	0.258	5e-44
326667289	1202	PREDICTED: zinc finger protein 729-like	0.846	0.594	0.263	6e-44
326667106	941	PREDICTED: zinc finger protein 729-like	0.884	0.792	0.260	3e-43
326665700	1573	PREDICTED: zinc finger protein 91-like [	0.918	0.492	0.249	3e-43
326667299	1069	PREDICTED: zinc finger protein 91-like,	0.858	0.677	0.271	4e-43
326667110	1395	PREDICTED: zinc finger protein 729-like,	0.836	0.505	0.264	7e-43
326673957	2528	PREDICTED: hypothetical protein LOC55726	0.806	0.268	0.274	1e-42
326666983	853	PREDICTED: zinc finger protein 91-like [	0.804	0.794	0.274	5e-41

>gi|334328883|ref|XP_001375603.2| PREDICTED: zinc finger protein 850-like [Monodelphis domestica]

 Score =  194 bits (493), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 219/793 (27%), Positives = 314/793 (39%), Gaps = 102/793 (12%)

Query: 2    QMIISEHIKSHEYVENHMCELCYKVFESRENLMRHLKIHDDKESKRFKCEQCDKRFSSNA 61
            Q  + E    H   ++++C+ C K F  R NL +H ++H  +  K F+C +C   FS   
Sbjct: 302  QSDLIEFYTVHPGDQSYVCKECGKTFSQRGNLNKHQRVHTGE--KPFECIECGDTFSQRR 359

Query: 62   ELNKHSSAIHQRLKLHECDLCGKNFSQRNNL---KRQANGSN------VNNRFSSNAELN 112
             LN H   IH   K HEC+ CGK F+QR++L   +R+ NG            F+    LN
Sbjct: 360  NLNAHQR-IHTGEKPHECNECGKAFTQRSHLTQHQRKHNGKKPYKCNECGKAFNHKGNLN 418

Query: 113  KHSSAIHQRLKLHECDLCGKNFSQRNNLKRHLEEVHRTDGMKFECYVCSKVLATSHSLKR 172
            +H S IH   K  EC+ CGK F+QR +L  H + +H T    FEC  C K      SL +
Sbjct: 419  RHQS-IHTGEKPFECNECGKAFTQRRDLNAH-QRIH-TGEKPFECTECGKAFNLRGSLNQ 475

Query: 173  HLLIHNGPK-YTCEICAKEFTRVYELNIHKKLHEDESVANQLKCEFCGKVFLKKSNLKAH 231
            H  IH G K + C  C K F +   L  HK++H  E      KC  CGK F ++ NL  H
Sbjct: 476  HQRIHTGEKPFECSECGKAFRQRGYLIYHKRIHTGEKP---FKCNECGKAFRQRGNLSEH 532

Query: 232  IENNHLDYSCLECKAVGEEISFDTKKNLLLHLKTKHKNVISNVYLTCLICFKTFLTEVDL 291
             +  H      EC   G+       +N L  L   H++        C  C K F    +L
Sbjct: 533  -KRIHTGEKPFECNLCGKAF-----RNALC-LTQHHRSHTGEKPFACNECGKAFNHRRNL 585

Query: 292  GKHMKMHMDDNQIQCRFCNKYFSRNYNLKQHMKTCTKNVSNGI--LNCDDNEGEYN---- 345
             +H  +H  +   +C  C K FS+  +L  H +     +  G+    C+D    +N    
Sbjct: 586  NRHQSIHTGEKTFECNECGKAFSQRGDLNAHQR-----IHTGVKPFACNDCGKTFNHRGN 640

Query: 346  ---------GHGSHEENEDDEDYDDMNEMMLVPVIK-----MELKEENEENEDREN---- 387
                     G    E  E  + +   +E+ +  +I       E K+  +   +R N    
Sbjct: 641  LNVHQRIHTGEKPFECKECGKAFIHNSELAVHQIIHCGKKFYECKQCGKAFSERGNLVKH 700

Query: 388  ---QSEEENYTPVPEVSIKRETDPLSVEDIISAGEVSITPIPQSNTNNHGSGSTNNTQ-- 442
                + E+ Y          + D L    I+  GE       Q       SG     Q  
Sbjct: 701  LRIHTGEKPYECKQCGKTFTQRDSLVKHQIVHTGEKPYV-CKQCGKAFTQSGHLTRHQTI 759

Query: 443  --ANKIIQCHICLKTFAKKDSLKKHMKVFHTYISPDAIKEESGEGKPNILEVILQEGKVP 500
                K  +C  C K F +K SL  H  + HT   P    E+ G+       ++  + +V 
Sbjct: 760  HTGEKPYECKQCGKAFTRKGSLAAHQTI-HTGEEPYEC-EQCGKAFTRRDSLVAHQ-RVH 816

Query: 501  NNNAIIQCRICSKTFTRKDSLRKHMRRFHIINDTNVKKEFTEGQINRNMLDVILKESGHE 560
                  +C+ C K FT++ +L KH +R H        K+  +    R  L    +   H 
Sbjct: 817  TGEKPYECKQCGKAFTQRSNLAKH-QRIHTGEKPFGCKQCGKAFTERGSLAAHQRM--HT 873

Query: 561  IKSRIPCELCYKTFTRKDSLRKHMKIFHTRRNPSANSGNSGTSAPPAVKLEQNGGEKVEN 620
             +    C+LC K F RK SL  H +I HT   P               + +Q G   +E 
Sbjct: 874  GEKPYGCKLCGKAFPRKGSLSAHQRI-HTGEKP--------------YECKQCGKAFIER 918

Query: 621  STSVENSTSVENSTSVE----NSANVENTS-SVDNRTSVGPVAPIDRIPCTLCDKTFTRK 675
             T   +          E      A  E  S +   R   G   P +   C  C K FTRK
Sbjct: 919  GTLAAHQRIHTGEKPYECKQCGRAFTERGSLAAHQRIHTG-EKPFE---CAQCGKAFTRK 974

Query: 676  DSLKKHIRIFHTQNQPQHTNVIEVALGARANAAFIDRI-------RCELCDKSFTRKDSL 728
             SL  H RI HT  +P        A   R + A   RI        C  C K+FT+++ L
Sbjct: 975  GSLVPHQRI-HTGEKPYECKQCGKAFTDRVSLAAHQRIHAGEKPYECTQCGKTFTQRNHL 1033

Query: 729  KKHNRIFHGGADP 741
              H RI H G  P
Sbjct: 1034 PAHQRI-HTGEKP 1045

Source: Monodelphis domestica

Species: Monodelphis domestica

Genus: Monodelphis

Family: Didelphidae

Order: Didelphimorphia

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|326680667|ref|XP_003201586.1| PREDICTED: zinc finger protein 729-like [Danio rerio]

 Score =  188 bits (478), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 225/842 (26%), Positives = 336/842 (39%), Gaps = 127/842 (15%)

Query: 2    QMIISEHIKSHEYVENHMCELCYKVFESRENLMRHLKIHDDKESKRFKCEQCDKRFSSNA 61
            Q  + +H+K H  V  +MC  C K F +   L RH +IH  +  K +KC QC K F+S++
Sbjct: 327  QSYLKKHMKIHTGVREYMCLECEKTFITAAELKRHQRIHTGE--KPYKCSQCSKSFNSSS 384

Query: 62   ELNKHSSAIHQRLKLHECDLCGKNFSQRNNLKRQANGSNVNNRFSSNAELNKHSSAIHQR 121
             LN+H   IH   K   C  C K+FSQ +NL       N++ R             IH R
Sbjct: 385  HLNQH-MRIHTGEKPFTCTQCEKSFSQSSNL-------NLHMR-------------IHTR 423

Query: 122  LKLHECDLCGKNFSQRNNLKRHLEEVHRTDGMKFECYVCSKVLATSHSLKRHLLIHNGPK 181
             K   C  CGKNF+Q +NL RH+  +H T    F C  C      S SL  H++ HNG K
Sbjct: 424  EKPFTCTQCGKNFNQSSNLNRHM-RIH-TGEKPFTCTQCGTSFIRSSSLNLHIMSHNGEK 481

Query: 182  -YTCEICAKEFTRVYELNIHKKLHEDESVANQLKCEFCGKVFLKKSNLKAH--IENNHLD 238
             +TC  C K F R   LN H  +H  E       C  CG  F + SNL  H  I      
Sbjct: 482  PFTCTQCGKSFNRSSHLNRHMMIHTGE---KPFTCTQCGMSFSQSSNLNLHMRIHTGEKP 538

Query: 239  YSCLECKAVGEEISFDTKKNLLLHLKTKHKNVISNVYLTCLICFKTFLTEVDLGKHMKMH 298
            ++C +C      +SF    NL LH++            TC  C K+F +   L +HM++H
Sbjct: 539  FACPQCG-----MSFSQSSNLNLHMRVH----TGEKPFTCPQCGKSFNSSSHLNRHMRIH 589

Query: 299  MDDNQIQCRFCNKYFSRNYNLKQHMKTCTKNVSNGILNCDDNEGEYNGHGSHEENEDDE- 357
              +    C+ C K FS+  NL  HM+  TK        C  + G   G  +H      E 
Sbjct: 590  TGEKPFTCKRCRKSFSKKSNLDIHMRVHTKEKPYTCKQCGKSFGYIQGFENHMRIHTGER 649

Query: 358  ---------DYDDMNEMMLVPVIKMELKE-ENEENEDRENQSEEENYTPVPEVSIKRETD 407
                      +     +     + M +   E   +  +  +S ++N      V++K    
Sbjct: 650  PYTCQHCGKSFSKTGNL----AVHMRIHTGEKPYSCSQCGKSFKQN------VTLKIHMR 699

Query: 408  PLSVEDIISAGEVSITPIPQSNTNNHGSGSTNNTQANKIIQCHICLKTFAKKDSLKKHMK 467
              + E I +  +   +   +   + H    T      K   C  C K+F  K SLK HM 
Sbjct: 700  THNEERIFTCTQCGKSISQKHYLDIHMRIHT----GEKPYTCTECGKSFPYKGSLKHHM- 754

Query: 468  VFHTYISPDAIKEESGEGKP-NILEVILQEGKVPNNNAIIQCRICSKTFTRKDSLRKHMR 526
            + HT   P A  +    GK  N    + Q  ++        C  C K+F+   +L +HM 
Sbjct: 755  ISHTGEKPFACTQ---CGKNFNQSSHLNQHMRIHTGEKPFTCTQCGKSFSYSANLNQHM- 810

Query: 527  RFHI----INDTNVKKEFT-EGQINRNMLDVILKESGHEIKSRIPCELCYKTFTRKDSLR 581
            R H        T   K F+    +N++M         H  +    C  C K+F++   L 
Sbjct: 811  RIHTGEKPFTCTQCGKSFSNSANLNQHMRI-------HTGEKPFTCTQCGKSFSQSSYLN 863

Query: 582  KHMKIFHTRRNP--SANSGNSGTSAPPAVK-LEQNGGEKVENSTSVENSTSVENS----- 633
            +HM+I HT   P   +  G S + +P   + +  + GEK    +    S S  +S     
Sbjct: 864  QHMRI-HTGEKPFTCSQCGKSFSQSPYLNQHMRIHTGEKPFTCSQCGKSFSQSSSLYLHM 922

Query: 634  ---------TSVENSANVENTSSVD----NRTSVGPVAPIDRIPCTLCDKTFTRKDSLKK 680
                     T  +   +   +S+++    N T   P        C  C K+F++  SL  
Sbjct: 923  RIHTGEKPFTCTQCGKSFSKSSNLNIHMRNHTGEKPFT------CLQCGKSFSQSTSLNL 976

Query: 681  HIRIFHTQNQPQHTNVIEVALGARANAAFIDR-------IRCELCDKSFTRKDSLKKHNR 733
            H+RI HT  +P        +    +N     R         C  C KSF++  SL +H R
Sbjct: 977  HMRI-HTGEKPFTCTQCGKSFSQSSNPNIHMRNHIGEKPFTCTQCGKSFSKSSSLNQHMR 1035

Query: 734  IFHGGADPKVMDE-QMARGSADFLEVVLNEDGEGEPVSITNEILCKICNRTFTRNYNLKK 792
            I H G  P    +   +   +  L   +      +P S T       C ++F+      K
Sbjct: 1036 I-HAGEKPSACSQCGKSFSCSSHLNKHMRNHTREKPFSCTQ------CGKSFSYPSAFNK 1088

Query: 793  HM 794
            HM
Sbjct: 1089 HM 1090

Source: Danio rerio

Species: Danio rerio

Genus: Danio

Family: Cyprinidae

Order: Cypriniformes

Class: Actinopterygii

Phylum: Chordata

Superkingdom: Eukaryota

>gi|326667465|ref|XP_700431.5| PREDICTED: hypothetical protein LOC571721 [Danio rerio]

 Score =  186 bits (472), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 213/824 (25%), Positives = 339/824 (41%), Gaps = 94/824 (11%)

Query: 20  CELCYKVFESRENLMRHLKIHDDKESKRFKCEQCDKRFSSNAELNKHSSAIHQRLKLHEC 79
           C+ C K F  ++ L  H++IH  +  K F C  C K F+    L  H   IH   K + C
Sbjct: 155 CQQCGKSFSQKQTLKVHMRIHTGE--KPFSCHHCGKTFTDKQNLMVHMR-IHTGDKPYIC 211

Query: 80  DLCGKNFSQRNNL---------KRQANGSNVNNRFSSNAELNKHSSAIHQRLKLHECDLC 130
            +CGKNFSQ+ +L         ++          F+    L  H S IH   K ++C  C
Sbjct: 212 TVCGKNFSQKPSLDVHVGIHTGEKPYQCQQCGKSFNRKQNLQVHMS-IHSGDKPYQCQQC 270

Query: 131 GKNFSQRNNLKRHLEEVHRTDGMKFECYVCSKVLATSHSLKRHLLIHNGPK-YTCEICAK 189
           GK+F+++ NL+ H+  +H T    F C+ C K  +  H+LK H+ IH G K YTC+ C K
Sbjct: 271 GKSFNRKQNLQVHMR-IH-TGEKPFSCHQCGKSFSHEHNLKVHMRIHTGDKPYTCQQCGK 328

Query: 190 EFTRVYELNIHKKLHEDESVANQLKCEFCGKVFLKKSNLKAHIENNHLD--YSCLECKAV 247
            FT+   L +H ++H  +      +C+ CGK F+ K +LK H+  +  D  Y C +C   
Sbjct: 329 SFTQKQNLKVHMRIHTGDKP---YQCQECGKSFIDKQHLKVHMRIHTGDKPYQCQQC--- 382

Query: 248 GEEISFDTKKNLLLHLKTKHKNVISNVYLTCLICFKTFLTEVDLGKHMKMHMDDNQIQCR 307
             E SFD K+NL +H++            TC  C K+   + +L  HM++H  D   QC+
Sbjct: 383 --ERSFDRKENLKVHMRIH----TGEKPFTCHQCGKSLNRKKNLQVHMRIHTGDKPYQCQ 436

Query: 308 FCNKYFSRNYNLKQHMKTCTKNVSNGILNCDDNEGEYNGHGSHEE-NEDDEDYDDMN--- 363
            C K F+R  N + HM+  TK        C  +         H   +  D+ Y       
Sbjct: 437 QCGKSFNRKQNFQVHMRIHTKEKPFSCHQCGRSFNRKQNLKVHMRVHTGDKPYQCQQCGK 496

Query: 364 EMMLVPVIKMELKEENEENEDR-----ENQSEEENYTPVPEVSIKRET------------ 406
                  + + ++  + E   +     E+ S++ + T    V  K +             
Sbjct: 497 SFSQKATLDLHMRIHSREKPYKCQHCGESFSQKAHLTGHERVHTKEKPYTCLQCGKCFSL 556

Query: 407 -DPLSVEDIISAGEVSITPIPQSNTNNHGSGSTNNTQAN---KIIQCHICLKTFAKKDSL 462
              L +   I +GE          + N  S  T +T+ +   K   C  C K+F +K  L
Sbjct: 557 KQNLKLHVRIHSGEKPYQCQHCGKSFNQRSHLTGHTRVHTKEKPYNCQQCGKSFNQKQKL 616

Query: 463 KKHMKVFHTYISPDAIKEESGEGKPNILEVILQ-EGKVPNNNAIIQCRICSKTFTRKDSL 521
           + H ++ HT   P + ++    GK    +  L+   +V        C+ C K F  K +L
Sbjct: 617 EFHTRI-HTGEKPFSCQQ---CGKSFAQQTNLKVHMRVHTRERPYTCQDCGKRFFHKQNL 672

Query: 522 RKHMRRFHIINDTNVKKEFTEGQINRNMLD--VILKESGHEIKSRIPCELCYKTFTRKDS 579
           + HM R H      V ++  +  I    LD   +L    H  +    C  C K+F++K  
Sbjct: 673 KVHM-RVHTGEKPYVCQQCGKSFI---FLDFCFLLHRRIHTGEKPYQCRQCGKSFSQKIQ 728

Query: 580 LRKHMKIFHTRRNPSANSGNSGTSAPPAVKLEQNGGEKVENSTSVENSTSVENSTSVENS 639
           L  HM + HT  NP      +      +   +QN    +   T  +     +   S    
Sbjct: 729 LEGHMGV-HTGVNPF-----TCQQCGKSFNRKQNLKVHIRVHTGEKPYQCQQCGKSFSQQ 782

Query: 640 ANVENTSSVDNRTSVGPVAPIDRIPCTLCDKTFTRKDSLKKHIRIFHTQNQPQHTNVIEV 699
            N++  S +   T   P        C  C K+F  K +L+ H+RI HT  +P        
Sbjct: 783 KNLD--SHLVIHTGANPFV------CQQCGKSFNHKQNLQVHMRI-HTGEKPYQCRQCGR 833

Query: 700 ALGARANAAFIDRI-------RCELCDKSFTRKDSLKKHNRIFHGGADPKVMDEQMARGS 752
           +   + +     RI       +C+ C KSF  K +LK H R+ H G  P        +  
Sbjct: 834 SFSQKTHLEIHMRIHTGDKPNQCQQCGKSFIHKQNLKVHMRV-HTGEKP-----YHCQHC 887

Query: 753 ADFLEVVLNEDGEGEPVSITNEILCKICNRTFTRNYNLKKHMKT 796
                   N +G     S      C+ C ++F   +NL+ H++ 
Sbjct: 888 GKSFSQQTNLEGHMRIHSGVKPFTCQECGKSFVHKHNLQLHLRV 931

Source: Danio rerio

Species: Danio rerio

Genus: Danio

Family: Cyprinidae

Order: Cypriniformes

Class: Actinopterygii

Phylum: Chordata

Superkingdom: Eukaryota

>gi|326667289|ref|XP_003198555.1| PREDICTED: zinc finger protein 729-like [Danio rerio]

 Score =  186 bits (471), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 221/839 (26%), Positives = 328/839 (39%), Gaps = 125/839 (14%)

Query: 5    ISEHIKSHEYVENHMCELCYKVFESRENLMRHLKIHDDKESKRFKCEQCDKRFSSNAELN 64
            + +H++ H   +   C  C K F     L RH++IH  +  K F C QC K FS ++  N
Sbjct: 361  LRQHMRIHTGEKPFTCTQCGKSFIQSSQLNRHMRIHTGE--KPFTCTQCGKSFSRSSYFN 418

Query: 65   KHSSAIHQRLKLHECDLCGKNFSQRNNLK---RQANG------SNVNNRFSSNAELNKHS 115
             H   IH   KL  C  CGK+F   ++LK   R  +G      +     FS ++ LN+H 
Sbjct: 419  LHM-RIHTGEKLFSCTQCGKSFRCSSSLKEHMRIHSGEKPFTCTQCGKSFSRSSHLNEHM 477

Query: 116  SAIHQRLKLHECDLCGKNFSQRNNLKRHLEEVHRTDGMKFECYVCSKVLATSHSLKRHLL 175
              IH   K   C  C K+FS+ ++L +H+  +H T    F C +C K    +  LK H+ 
Sbjct: 478  -MIHTGEKPFTCTQCWKSFSRSSHLNQHMM-IH-TGEKPFTCTLCGKSFGRNFDLKTHMT 534

Query: 176  IHNGP-KYTCEICAKEFTRVYELNIHKKLHEDESVANQLKCEFCGKVFLKKSNLKAH--I 232
            IH G   +TC  C K F R ++L IH ++H  E       C  CGK F + S+L  H  I
Sbjct: 535  IHTGENTFTCTQCGKSFGRNFDLKIHMRIHTGE---KPFTCTLCGKSFSRSSHLNEHMKI 591

Query: 233  ENNHLDYSCLECKAVGEEISFDTKKNLLLHLKTKHKNVISNVY----------------- 275
                  ++C +C   G+  +  +  N    + T+ K  I +                   
Sbjct: 592  HTRERSFTCTQC---GKSFTLSSHLNRHKKIHTREKPFICSQCGKTFNYSSCLNEHMRIH 648

Query: 276  -----LTCLICFKTFLTEVDLGKHMKMHMDDNQIQCRFCNKYFSRNYNLKQHMKTCTKNV 330
                  TC  C K+F     L +HM +H  +    C  C K F RN++LK HM   T   
Sbjct: 649  TGEKPFTCTQCGKSFSRSSHLNQHMMIHTREKPFTCTLCGKSFGRNFDLKTHMTIHTGEN 708

Query: 331  SNGILNCDDNEGEYNGHGSHEENEDDEDYDDMNEMMLVPVIKMELKEENEENEDRENQSE 390
            +     C  + G       H      E      +              +  NE  +  + 
Sbjct: 709  TFTCTQCGKSFGRKWDLKIHMRIHTGEKPFTCTQ------CAKSFSRSSHLNEHMKIHTR 762

Query: 391  EENYTPVPEVSIKRETDPLSVEDIISAGEVSITPIPQSNTNNHGSGSTNNTQ---ANKII 447
            E  +T          +  L+    I   E   T      T N+ S    + +     K  
Sbjct: 763  ERPFTCTQCGKGFTLSSHLNRHKKIHTREKPFTCTQCGKTFNYSSCLNEHMRIHTGEKPF 822

Query: 448  QCHICLKTFAKKDSLKKHMKVFHTYISPDAIKEESGEGKPNILEVIL-QEGKVPNNNAII 506
             C  C K+F++   L +HM + HT   P    +    GK   L   L +  K+       
Sbjct: 823  TCIQCGKSFSRSSHLNEHMMI-HTGEKPFTCTQC---GKGFTLSSHLNRHKKIHTREKPF 878

Query: 507  QCRICSKTFTRKDSLRKHMRRFHI----INDTNVKKEFT-EGQINRNMLDVILKESGHEI 561
             C  C KTF     L +HMR  H        T   K F+    +N++M+        H  
Sbjct: 879  TCSQCGKTFNYSSCLNEHMR-IHTGEKPFTCTQCGKSFSRSSHLNQHMMI-------HTR 930

Query: 562  KSRIPCELCYKTFTRKDSLRKHMKIFHTRRNPSANSGNSGTSAPPAVKLEQNGGEKVENS 621
            +    C LC K+F+R   L +HMKI HTR  P   +   G     +  L ++  +K+   
Sbjct: 931  EKPFTCTLCGKSFSRSSHLNEHMKI-HTRERPFTCT-QCGKGFTLSSHLNRH--KKIH-- 984

Query: 622  TSVENSTSVENSTSVENSANVENTSSVDN---RTSVGPVAPIDRIPCTLCDKTFTRKDSL 678
                   + E   +        N SS  N   R   G     +   CT C K+F RK  L
Sbjct: 985  -------TREKPFTCTQCGKTLNCSSCLNKHMRVHTGE----NTFTCTQCGKSFGRKWDL 1033

Query: 679  KKHIRIFHTQNQPQHTNVIEVALGARANAAFIDRIRCELCDKSFTRKDSLKKHNRIFHGG 738
            K HIRI HT  +P                       C LC KSF+R   L +H ++ H G
Sbjct: 1034 KIHIRI-HTGEKP---------------------FTCTLCGKSFSRSSHLNEHMKM-HTG 1070

Query: 739  ADPKVMDE--QMARGSADFLEVVLNEDGEGEPVSITNEILCKICNRTFTRNYNLKKHMK 795
              P    +  +   GS+     +    GE +P + T       C ++F+R+ +L +HMK
Sbjct: 1071 ERPFTCTQCGKSFSGSSHLNRHMRIHTGE-KPFTCTQ------CGKSFSRSSHLNEHMK 1122

Source: Danio rerio

Species: Danio rerio

Genus: Danio

Family: Cyprinidae

Order: Cypriniformes

Class: Actinopterygii

Phylum: Chordata

Superkingdom: Eukaryota

>gi|326667106|ref|XP_003198487.1| PREDICTED: zinc finger protein 729-like [Danio rerio]

 Score =  183 bits (465), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 227/873 (26%), Positives = 351/873 (40%), Gaps = 127/873 (14%)

Query: 5   ISEHIKSHEYVENHMCELCYKVFESRENLMRHLKIHDDKESKRFKCEQCDKRFSSNAELN 64
           +++H++ H   +   C  C K F    +L RH+KIH  +  K F C  C K FS ++ LN
Sbjct: 109 LNQHMRIHTGEKPFTCTQCGKSFSKLSSLYRHMKIHTGE--KPFTCTHCGKSFSQSSYLN 166

Query: 65  KHSSAIHQRLKLHECDLCGKNFSQRNNLK---------RQANGSNVNNRFSSNAELNKHS 115
            H   IH   K   C  CGKNF+Q   LK         +    +     F+ ++ L  H 
Sbjct: 167 LHM-WIHTGEKPFTCPQCGKNFNQSLTLKFHMMIHAGEKPFTCTQCGKSFNQSSSLKIHM 225

Query: 116 SAIHQRLKLHECDLCGKNFSQRNNLKRHLEEVHRTDGMKFECYVCSKVLATSHSLKRHLL 175
             IH   K   C  CGK+FSQ ++L  H+  +H T    F C  C K  + S SL  H+ 
Sbjct: 226 -RIHTGEKPFTCTQCGKSFSQSSSLNLHMR-IH-TGEKPFTCTQCGKSFSQSSSLNLHVR 282

Query: 176 IHNGPK-YTCEICAKEFTRVYELNIHKKLHEDESVANQLKCEFCGKVFLKKSNLKAH--I 232
           IH G K +TC  C K F+    LN H K+H  E       C  CGK F + S+L  H  I
Sbjct: 283 IHTGEKPFTCPQCGKSFSHSSHLNCHMKIHTGE---KPFTCPHCGKSFSQSSHLNCHMKI 339

Query: 233 ENNHLDYSCLECKAVGEEISFDTKKNLLLHLKTKHKNVISNVYLTCLICFKTFLTEVDLG 292
                 ++C +C       SF    NL  H+ T H         TC  C K+F     L 
Sbjct: 340 HTGEKPFTCPQCGK-----SFSQSSNLNCHM-TIH---TGEKPFTCTQCGKSFTCSSHLH 390

Query: 293 KHMKMHMDDNQIQCRFCNKYFSRNYNLKQHMKTCTKNVSNGILNCDDNEGEYNGHGSHEE 352
           +HM++H  +    C  C K F+ + +L QH++  +         C  N  +     S   
Sbjct: 391 QHMRIHTGEKPFTCTQCGKCFNCSSHLNQHIRIHSGEKPFTCTQCGKNFNQ-----SSHL 445

Query: 353 NEDDEDYDDMNEMMLVPVIKMELKEENEENEDRENQSEEENYTPVPEVSIKRETDPLSVE 412
           N+    +            K         N+     + E+ +T         ++  L++ 
Sbjct: 446 NQHMRIHTGEKPFTCTQCGK-SFSNSANLNQHMRIHTGEKPFTCTQCGKSFSQSSYLNIH 504

Query: 413 DIISAGEVSITPIPQSNTNNHGSGSTNNTQ----ANKIIQCHICLKTFAKKDSLKKHMKV 468
             I  GE   T  PQ   +   S   N         K   C  C K+F++  SL  H+++
Sbjct: 505 MRIHTGEKPFT-CPQCGKSFSQSQYLNQHMRIHTGEKPFTCSQCGKSFSQSSSLNLHIRI 563

Query: 469 FHTYISPDAIKEESGEG--KPNILEVILQ--EGKVPNNNAIIQCRICSKTFTRKDSLRKH 524
            HT   P     + G+   K +IL + ++   G+ P       C  C K+F++  SL +H
Sbjct: 564 -HTGEKPFTC-TQCGKSFNKSSILNIHMRNHTGEKP-----FTCLQCGKSFSQSTSLNQH 616

Query: 525 MRRFH----IINDTNVKKEFT-EGQINRNMLDVILKESGHEIKSRIPCELCYKTFTRKDS 579
           MR  H    +   T   K F+    +N++M         H  +    C  C K+F++   
Sbjct: 617 MR-IHTGEKLFTCTQCGKSFSNSANLNQHMRI-------HTGEKPFTCSQCGKSFSQSSY 668

Query: 580 LRKHMKIFHTRRNP--SANSGNSGTSAPPA-VKLEQNGGEKVENSTSVENSTSVENSTSV 636
           L  HM+I HT   P      G S + +P     +  + GEK    T    S S  ++ ++
Sbjct: 669 LNIHMRI-HTGEKPFTCPQCGKSFSQSPYLNHHMRIHTGEKPFTCTQCGKSFSQSSNLNI 727

Query: 637 ENSANVENTSSVDNRTSVGPVAPIDRIPCTLCDKTFTRKDSLKKHIRIFHTQNQPQHTNV 696
                      + N +   P        CT C+K+F++  SL +H+RI HT  +P     
Sbjct: 728 H----------MRNHSGEKPFT------CTQCEKSFSQSTSLNRHMRI-HTGEKP--FTC 768

Query: 697 IEVALGARANAAFIDRIR---------CELCDKSFTRKDSLKKHNRIFHGGADPKVMDE- 746
           I+       +++F   +R         C  C K F+    L KH +  H G  P    + 
Sbjct: 769 IQCGKSFIQSSSFNLHMRFHTGEKPFTCTPCRKRFSNSSDLNKHMKT-HTGEKPFTCTQC 827

Query: 747 --QMARGSADFLEVVLNEDGE--------GEPVSITNEI-------------LCKICNRT 783
               +R S+   + ++   GE        G+  S T+++              C  C ++
Sbjct: 828 GKSFSR-SSHLKQHMMIHTGEKPFTCTQCGKSFSNTSDLNKHMRIHTGEKPFTCTQCGKS 886

Query: 784 FTRNYNLKKHMKTVHKIDDNEPYFAYENTEYDE 816
           F+R+ +L KHM    +I   E  F Y N+   E
Sbjct: 887 FSRSSDLNKHM----RIHTGEKPFTYINSYTRE 915

Source: Danio rerio

Species: Danio rerio

Genus: Danio

Family: Cyprinidae

Order: Cypriniformes

Class: Actinopterygii

Phylum: Chordata

Superkingdom: Eukaryota

>gi|326665700|ref|XP_003198088.1| PREDICTED: zinc finger protein 91-like [Danio rerio]

 Score =  183 bits (465), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 239/958 (24%), Positives = 363/958 (37%), Gaps = 184/958 (19%)

Query: 5    ISEHIKSHEYVENHMCELCYKVFESRENLMRHLKIHDDKESKRFKCEQCDKRFSSNAELN 64
            +++H+K H   +   C  C K F    +L +H+KIH +K    F C QC K FS ++ LN
Sbjct: 374  LNQHMKIHTGEKPFTCTQCGKSFNQSSDLNQHMKIHTEKP---FTCTQCGKSFSQSSILN 430

Query: 65   KHSSAIHQRLKLHECDLCGKNFSQRNNLKRQA---------NGSNVNNRFSSNAELNKHS 115
            KH   IH   K   C  CGK+F Q + L +             +     FS ++ LNKH 
Sbjct: 431  KHM-KIHTGEKPFRCTKCGKSFCQSSQLTQHMRIHTGEKPFTCTQCGKSFSQSSHLNKHK 489

Query: 116  SAIHQRLKLHECDLCGKNFSQRNNLKRHLEEVHRTDGMKFECYVCSKVLATSHSLKRHLL 175
            + IH   K   C  CGK+FSQ +NL RH++   RT    F C  C K    S  L +H+ 
Sbjct: 490  T-IHAGEKPFTCIHCGKSFSQSSNLNRHMKI--RTGEKPFTCTQCGKSFCQSSQLTQHMR 546

Query: 176  IHNGPK-YTCEICAKEFTRVYELNIHKKLHEDESVANQLKCEFCGKVFLKKSNLKAH--I 232
            IH G K  TC  C K + +   LN HKK+H  E      +C  CGK F   SN K H  I
Sbjct: 547  IHTGEKPLTCTQCGKSYRQKSTLNKHKKIHTGE---KPFRCTQCGKSFTFSSNYKKHMRI 603

Query: 233  ENNHLDYSCLECKAVGEEISFDTKKNLLLHLKT-------------KHKNVISNV----- 274
                  ++C EC       SF     L  H++              K   +IS +     
Sbjct: 604  HTGEKPFTCTECGK-----SFYQSSQLTPHMRIHTGEKPFTCTQCGKSFRLISTLNTHKK 658

Query: 275  ------YLTCLICFKTFLTEVDLGKHMKMHMDDNQIQCRFCNKYFSRNYNLKQHMKTCTK 328
                    TC +C K+F+   +  KHM++H  +    C  C K FS +  L QHM+  T 
Sbjct: 659  IHTGEKPFTCTLCGKSFIFSSNYNKHMRIHSGEKPFTCSQCGKSFSVSSYLNQHMRIHTG 718

Query: 329  NVSNGILNCDDNEGEYNGHGSHEENEDDEDYDDMNEMMLVPVIKMELKEENEENEDRENQ 388
                    C  +  + +                    +L P +K+               
Sbjct: 719  EKPYTCAQCGKSFSQSS--------------------ILTPHMKI--------------H 744

Query: 389  SEEENYTPVPEVSIKRETDPLSVEDIISAGEVSITPIPQSNTNNHGSGSTNNTQ------ 442
            +EE+ +T        R+   L+   I++  +    P   +      + S+N T+      
Sbjct: 745  TEEKPFTCTECGKSFRQISTLNTHTILTGEK----PFRCTLCGKSFTFSSNYTKHLRIHT 800

Query: 443  ANKIIQCHICLKTFAKKDSLKKHMKVFHTYISP-------DAIKEES---------GEGK 486
              K   C  C K F+   SLK+HM++ HT   P        + ++ S           GK
Sbjct: 801  GEKPFTCSQCGKRFSVSSSLKQHMRI-HTGEKPFTCTQCGKSFRQRSTLCRHMEIHTGGK 859

Query: 487  P--------NILEVILQEG--KVPNNNAIIQCRICSKTFTRKDSLRKHMR---------- 526
            P        +  ++   +G  ++       +C  C K+FT   +  KHMR          
Sbjct: 860  PFTCTQCGQSFRQMATLKGHMEIHTGEKPFRCTQCGKSFTFSSNYNKHMRIHTAEKPFTC 919

Query: 527  -----RFHIINDTNV-------KKEFTEGQINRNMLDVIL---KESGHEIKSRIPCELCY 571
                  F I +  N        +K FT  Q  R+   +      +  H  +  + C LC 
Sbjct: 920  SQCGKSFSISSSFNQHMRIHTGEKPFTCTQCGRSFRQISTLNRHKKIHTGEKPLTCTLCG 979

Query: 572  KTFTRKDSLRKHMKIFHTRRNP--SANSGNSGT-SAPPAVKLEQNGGEKVENSTSVENST 628
            K+FT   +   HM I HT   P      G S T S+     +  + GEK    +    S 
Sbjct: 980  KSFTFSSNYNDHMMI-HTGVKPFTCTQCGKSFTFSSNYNQHMRIHSGEKPFTCSQCGKSF 1038

Query: 629  SVEN--------------STSVENSANVENTSSVDNRTSVGPVAPIDRIPCTLCDKTFTR 674
            S+ +               T  +   +   TS++     +          CT C K+F +
Sbjct: 1039 SISSYLIKHMRIHTGEKPYTCSQCGQSFRQTSTLKGHMEIHTGE--KPFTCTECGKSFRK 1096

Query: 675  KDSLKKHIRIFHTQNQPQHTNVIEVALGARANAAFIDRIR-------CELCDKSFTRKDS 727
              +LK H+RI HT  +P        +    +N     RI        C  C KSF+   S
Sbjct: 1097 IATLKGHMRI-HTGEKPFRCTQCGKSFTLSSNYNQHMRIHTGEKPFTCSQCGKSFSMLSS 1155

Query: 728  LKKHNRIFHGGADPKVMDEQMARGSADFLEVVLNEDGEGEPVSITNEILCKICNRTFTRN 787
            L +H RI H G  P    +    G +     VLN   +    +      C  C + F+++
Sbjct: 1156 LNQHMRI-HTGEKPYTCTQC---GQSFRQTSVLNRHMKVH--AGMKPFRCTQCGKRFSKS 1209

Query: 788  YNLKKHMKTVHKIDDNEPYFAYENTEYDEEEGEME---GEEFGSLSNSMLEVIIRDDE 842
             +LK HMK    +     +      +Y       E   GE    L  + ++ +++D E
Sbjct: 1210 SHLKLHMKIHSGVGSQSAFADQRAGKYPAHSAYSEAEIGESRTLLFEAQVKSLLKDSE 1267

Source: Danio rerio

Species: Danio rerio

Genus: Danio

Family: Cyprinidae

Order: Cypriniformes

Class: Actinopterygii

Phylum: Chordata

Superkingdom: Eukaryota

>gi|326667299|ref|XP_002661787.2| PREDICTED: zinc finger protein 91-like, partial [Danio rerio]

 Score =  183 bits (464), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 228/839 (27%), Positives = 336/839 (40%), Gaps = 115/839 (13%)

Query: 20   CELCYKVFESRENLMRHLKIHDDKESKRFKCEQCDKRFSSNAELNKHSSAIHQRLKLHEC 79
            C  C K F +  +L  H++IH  +  K F C QC K F+ ++ LN+H   IH R K   C
Sbjct: 264  CTQCGKTFNNSSHLYEHMRIHTGE--KPFTCTQCGKNFNQSSNLNQHM-RIHTREKPFTC 320

Query: 80   DLCGKNFSQRNNL---------KRQANGSNVNNRFSSNAELNKHSSAIHQRLKLHECDLC 130
              CGK+FSQ+ NL         ++    +     F     L KH   IH   K + C  C
Sbjct: 321  TQCGKSFSQKQNLTIHMRIHTGEKPYTCTECGKSFPHTGSL-KHHRRIHTGEKPYTCTRC 379

Query: 131  GKNFSQRNNLKRHLEEVHRTDGMKFECYVCSKVLATSHSLKRHLLIHNGPK-YTCEICAK 189
            GK+FSQ +NL +H+  +H T    F C  C K    S SL  H++IH G K +TC  C K
Sbjct: 380  GKSFSQSSNLNQHMR-IH-TGEKPFTCTQCGKSFNRSSSLNEHMMIHTGEKPFTCTQCGK 437

Query: 190  EFTRVYELNIHKKLHEDESVANQLKCEFCGKVFLKKSNLKAH--IENNHLDYSCLEC-KA 246
             F R ++L IH  +H  E   N  +C  CGK F + S L  H  I      ++C +C K+
Sbjct: 438  SFGRNFDLKIHMMIHTGE---NPFRCTHCGKSFSQSSYLNQHMRIHTRENPFTCTQCGKS 494

Query: 247  VGEEISFDTKKNLLLHLKTKHKNVISNVYLTCLICFKTFLTEVDLGKHMKMHMDDNQIQC 306
                 S +  K +  H + K          TC  C KTF     L +HM++H  +    C
Sbjct: 495  FHRSSSLNNHKTI--HTREK--------PFTCTQCGKTFNNSSHLYEHMRIHTGEKPFTC 544

Query: 307  RFCNKYFSRNYNLKQHMK--------TCTKNVSNGILNCDDNEGE--YNGHGSHEENEDD 356
              C K FS + NL +HM+        TCT+   + I +   N     + G       +  
Sbjct: 545  TQCGKSFSLSSNLNRHMRIHTREKPFTCTQCGKSFICSSSLNLHMRIHTGEKPFTCTQCG 604

Query: 357  EDYDD---MNEMMLV-----PVIKME----LKEENEENEDRENQSEEENYTPVPEVSIKR 404
            + +     +NE + +     P    +           NE     + E+ +T +    I  
Sbjct: 605  KSFSSSTHLNEHIRIHTGEKPFTCTQCAKSFNRSEHLNEHMRTHTGEKPFTCIQCGKIFS 664

Query: 405  ETDPLSVEDIISAGEVSITPIPQSNTNNHGSGSTNNTQ---ANKIIQCHICLKTFAKKDS 461
             +  L+    I  GE   T      + +  S    + +     K   C  C K+FAKK +
Sbjct: 665  ISSSLNRHMRIHTGEKPFTCTQCGKSFSQSSSLKEHMRIHTGEKPFTCTQCGKSFAKKHN 724

Query: 462  LKKHMKVFHTYISPDAIKEESGEGKPNILEVILQEGKVPNNNAIIQCRICSKTFTRKDSL 521
            L  HM++ HT   P     E G+  P      +   ++       +C  C K+FT K++L
Sbjct: 725  LNIHMRI-HTGEKPYTC-TECGQSFPYKTTFNIHR-RIHTGEKPYRCTECGKSFTHKNTL 781

Query: 522  RKHMRRFHIINDTNVKKEFTE-GQ---INRNMLDVILKESGHEIKSRIPCELCYKTFTRK 577
              H R    I+        TE GQ       + + I+  +G   +    C  C K+F + 
Sbjct: 782  NNHKR----IHTGEKPYRCTECGQRFPYKTTLTNHIIIHTG---EKPFTCTQCGKSFNQS 834

Query: 578  DSLRKHMKIFHTRRNP--SANSGNS-GTSAPPAVKLEQNGGEKVENSTSVENSTSVENST 634
              L  HM I HT + P      G S   S+   + +  + GEK    T    S    N +
Sbjct: 835  SHLSYHMMI-HTGKKPFTCTQCGKSFNQSSHLNLHMMIHTGEKPFTCTHCGKSF---NCS 890

Query: 635  SVENSANVENTSSVDNRTSVGPVAPIDRIPCTLCDKTFTRKDSLKKHIRIFHTQNQPQHT 694
            S  N   + +T                   CT C K+F +   L +H+RI HT  +P   
Sbjct: 891  SHLNQHMMIHTGKKP-------------FTCTECVKSFKQSSHLNQHMRI-HTGEKPYVC 936

Query: 695  NVIEVALGARANAAFIDRI-------RCELCDKSFTRKDSLKKHNRIFHGGADPKVMDEQ 747
                 +     N     RI       +C  C KSF++   L  H RI H G  P    + 
Sbjct: 937  TQCGKSFNCLTNLNHHMRIHTGEKPFKCTQCGKSFSQSSYLNLHMRI-HTGEKPYACTQC 995

Query: 748  MARGSADFLEVVLN-----EDGEGEPVSIT------NEILCKICNRTFTRNYNLKKHMK 795
               G + +    LN       GE +P + T          C  C R+F R+ +L  HMK
Sbjct: 996  ---GKSFYCSSHLNHHMRIHTGE-KPFTCTQIHTGEQPFTCTQCGRSFNRSSHLNNHMK 1050

Source: Danio rerio

Species: Danio rerio

Genus: Danio

Family: Cyprinidae

Order: Cypriniformes

Class: Actinopterygii

Phylum: Chordata

Superkingdom: Eukaryota

>gi|326667110|ref|XP_003198489.1| PREDICTED: zinc finger protein 729-like, partial [Danio rerio]

 Score =  182 bits (462), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 217/820 (26%), Positives = 328/820 (40%), Gaps = 115/820 (14%)

Query: 5   ISEHIKSHEYVENHMCELCYKVFESRENLMRHLKIHDDKESKRFKCEQCDKRFSSNAELN 64
           +  H++ H   +   C  C K F    +L RH+KIH  +  K F C  C K F+ ++ LN
Sbjct: 137 LKTHMRIHTGEKPFTCTQCGKSFSKSSSLYRHMKIHTGE--KPFTCTHCGKSFNHSSFLN 194

Query: 65  KHSSAIHQRLKLHECDLCGKNFSQRNNLKRQA---------NGSNVNNRFSSNAELNKHS 115
            H   IH   K   C  CGK+FS+ ++L R             +     F+ ++ LNKH 
Sbjct: 195 LHM-RIHTGEKPLTCPQCGKSFSKSSSLYRHMKIHTGEKPFTCTQCGKSFNCSSSLNKHM 253

Query: 116 SAIHQRLKLHECDLCGKNFSQRNNLKRHLEEVHRTDGMKFECYVCSKVLATSHSLKRHLL 175
             IH   K   C  CGK+FS  ++L +H+  +H T    F C  C K    S  L +H++
Sbjct: 254 -RIHTGEKPFTCTQCGKSFSHSSSLNQHMR-IH-TGEKPFTCPQCGKSFINSSHLNQHIM 310

Query: 176 IHNGPK-YTCEICAKEFTRVYELNIHKKLHEDESVANQLKCEFCGKVFLKKSNLKAHI-- 232
           IH G K +TC  C K F     LN H ++H  E       C  CGK F + S+L  HI  
Sbjct: 311 IHTGEKPFTCTQCGKSFNCSSSLNKHMRIHTGE---KPFTCTQCGKSFSQSSSLNQHIMI 367

Query: 233 ENNHLDYSCLECKAVGEEISFDTKKNLLLHLKTKHKNVISNVYLTCLICFKTFLTEVDLG 292
                 ++C +C       SF     L  H+K  H +V   V   CL C KTF+T  +L 
Sbjct: 368 HTGKKPFTCTQCGK-----SFSQSSYLKNHMKI-HTSVKEYV---CLECEKTFITAAELK 418

Query: 293 KHMKMHMDDNQIQCRFCNKYFSRNYNLKQHMKTCTKNVSNGILNCDDNEGEYNGHGSHEE 352
           +H ++H  +   +C  C+K F++   LK H +  T +       C  +  + +    H  
Sbjct: 419 RHQRIHTGEKPYKCSHCSKRFTQLGTLKTHERIHTGDKPYKCTQCGKSFSQSSNFNLHMR 478

Query: 353 NEDDEDYDDMNEMMLVPVIKMELKEENEENEDRENQSEEENYTPVPEVSIKRETDPLSVE 412
               E      +           ++ +  N+     + E+ +T          +  L+  
Sbjct: 479 IHTGEKPFTCTQ------CGKSFRQASSLNKHMRTHTGEKPFTCTQCGKSFNRSSTLNQH 532

Query: 413 DIISAGEVSITPIPQSNTNNHGSGSTNNTQANKIIQCHICLKTFAKKDSLKKHMKVFHTY 472
             I  GE    PIP                      C  C K+F +  SL KHM++ HT 
Sbjct: 533 IRIHTGE---KPIP----------------------CTQCGKSFRQSSSLYKHMRI-HTG 566

Query: 473 ISPDAIKE--ESGEGKPNI-LEVILQEGKVPNNNAIIQCRICSKTFTRKDSLRKHMRRFH 529
             P    +  +S     N  L + +  G+ P     I+C  C K+F +  SL KHM R H
Sbjct: 567 EKPFTCTQCGKSFSQSSNFNLHMRIHTGEKP-----IRCTQCGKSFHQSSSLYKHM-RIH 620

Query: 530 I----INDTNVKKEFTEG-QINRNMLDVILKESGHEIKSRIPCELCYKTFTRKDSLRKHM 584
                   T   K F +   +N++M         H  +    C  C  +F     L++HM
Sbjct: 621 TGEKPFTCTQCGKSFRQASSLNKHMRI-------HTGEKPFTCTQCGISFNCSSYLKQHM 673

Query: 585 KIFHTRRNPSANSGNSGTSAPPAVKLEQNGGEKVENSTSVENSTSVENSTSVENSANVEN 644
           +I HT   P   +   G S   +  L  +    +   T  +  T  +   S   S+N+  
Sbjct: 674 RI-HTGEKPFTCT-QCGRSFNRSSHLNHH----MRIHTGEKPFTCTQCGKSFNRSSNLNQ 727

Query: 645 TSSVDNRTSVGPVAPIDRIPCTLCDKTFTRKDSLKKHIRIFHTQNQPQHTNVIEVALGAR 704
              +   T   P+       CTLC K+F +  SL KH+R  HT  +P        +    
Sbjct: 728 --HIRIHTGEKPIT------CTLCGKSFRQSSSLSKHMRT-HTGEKPFTCTQCGKSFSQS 778

Query: 705 ANAAFIDRIR-------CELCDKSFTRKDSLKKHNRIFHGGADPKVMDE--QMARGSADF 755
           +N     RI        C  C KSF +  SL KH R  H G  P    +  +    S+  
Sbjct: 779 SNFNLHMRIHTGEKPFTCTQCGKSFRQASSLNKHTRT-HTGEKPFTCTQCGKSFNRSSHL 837

Query: 756 LEVVLNEDGEGEPVSITNEILCKICNRTFTRNYNLKKHMK 795
            + +    GE         I C  C ++F ++ +L KHM+
Sbjct: 838 NQHIRIHTGE-------KPITCTQCGKSFRQSSSLYKHMR 870

Source: Danio rerio

Species: Danio rerio

Genus: Danio

Family: Cyprinidae

Order: Cypriniformes

Class: Actinopterygii

Phylum: Chordata

Superkingdom: Eukaryota

>gi|326673957|ref|XP_003200037.1| PREDICTED: hypothetical protein LOC557268 [Danio rerio]

 Score =  181 bits (460), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 223/812 (27%), Positives = 332/812 (40%), Gaps = 132/812 (16%)

Query: 5    ISEHIKSHEYVENHMCELCYKVFESRENLMRHLKIHDDKESKRFKCEQCDKRFSSNAELN 64
            +++H++ H   + + C+ C K F  ++N   H+++H+ +  K   C QC+K F+    L 
Sbjct: 613  LTDHVRMHNGEKPYNCQHCGKSFTWKKNFKSHMRMHNGE--KPHACLQCEKSFTWKHHLV 670

Query: 65   KHSSAIHQRLKLHECDLCGKNFSQRNNLKRQA---------NGSNVNNRFSSNAELNKH- 114
             H   IH   K H C  CGK F+++ NL +                   FS    L  H 
Sbjct: 671  THMR-IHTGEKQHSCLQCGKGFTRKLNLTKHMRIHTGEKPYTCQQCGKSFSWKQYLTDHM 729

Query: 115  -SSAIHQRLKLHECDLCGKNFSQRNNLKRHLEEVHRTDGMKFECYVCSKVLATSHSLKRH 173
             +   H   K H C  CGK F+++ NL  H+  +  T    + C  C K      +LK H
Sbjct: 730  RTHTAHTAEKQHTCHQCGKGFTRKRNLLNHM--IIHTGEKPYTCQQCGKSFNQRRNLKEH 787

Query: 174  LLIHNGPK-YTCEICAKEFTRVYELNIHKKLHEDESVANQLKCEFCGKVFLKKSNLKAH- 231
              IHNG K Y C+ C K F R   L IH ++H +E   N   C+ CGK F  K  L  H 
Sbjct: 788  EKIHNGKKLYICQHCGKSFARKQYLIIHMRIHTEEKPYN---CQQCGKNFSWKKYLTDHV 844

Query: 232  -IENNHLDYSCLECKAVGEEISFDTKKNLLLHLKTKHKNVISNVYLTCLICFKTFLTEVD 290
             I      Y+C +C       SF+ ++N+  H+K  +         TC  C K+F  + +
Sbjct: 845  RIHTGEKPYTCQQCGK-----SFNRRENVKEHMKLHN----GEKPYTCQQCGKSFTWKQN 895

Query: 291  LGKHMKMHMDDNQIQCRFCNKYFSRNYNLKQHMKTCT------------KNV-SNGILNC 337
            L  HM++H  +    C  C K F+   NL +HM+  T            KN+ S+GI+N 
Sbjct: 896  LTSHMRIHTGEKPYVCLHCGKSFTCKQNLTKHMRIHTGEKPSLANSCNAKNLTSDGIINS 955

Query: 338  DD-------NEGEYN--------GHGSHEENEDDEDYDDMNEMMLVPV----IKME---- 374
                       G +         G   H  +    D   + +M  +      IK+E    
Sbjct: 956  SRFYPSPKLRTGLHKSRTLQVTEGPAEHHPSPRPPDSQTVIKMAFIKEESEDIKIEETFT 1015

Query: 375  LKEENEENEDRENQSEEENYTPVPEVSIKRETDPLSVEDI--------ISAGEVSITPIP 426
            +K E  E   R     ++N  PV E S     D   VE+          S+GE S     
Sbjct: 1016 VKHEETEEAFRHVSCCKKNLMPVKEES----QDQNEVEEKDQHEECLDFSSGEKS----E 1067

Query: 427  QSNTNNHGSGSTNNTQANKIIQCHICLKTFAKKDSLKKHMKVFHTYISPDAIKEESGEGK 486
            Q+ T++  +  +N         CH C K+FA K  L KHM++ HT   P    +    GK
Sbjct: 1068 QTKTSSQTTAKSNT--------CHQCGKSFAHKHYLTKHMRI-HTGEKPYTCTQ---CGK 1115

Query: 487  P-NILEVILQEGKVPNNNAIIQCRICSKTFTRKDSLRKHMRRFHIINDTNVKKEFTEGQI 545
              N  E + +  K+ N   +  C+ C K+FT K +L  HM R H     +   +  +G  
Sbjct: 1116 SFNRRENLKEHMKIHNGEKLYTCQQCEKSFTWKQNLTSHM-RIHTGEKQHSCLQCGKGFT 1174

Query: 546  NRNMLDVILKESGHEIKSRIPCELCYKTFTRKDSLRKHMKIFHTRRNP-----SANSGNS 600
             +  L++      H  +    C+ C K+FTRK +L  HM+I HT   P        S N 
Sbjct: 1175 QK--LNLTKHMRIHTGEKPYTCQQCGKSFTRKRNLLNHMRI-HTGEKPYTCQQCGKSFNR 1231

Query: 601  GTSAPPAVKLEQNGGEKVENSTSVENSTSVENSTSVENSANVENTSSVDNRTSVGPVAPI 660
                   +K+  + GEK+   T  +   S      +     + N   +            
Sbjct: 1232 REYLREHMKI--HNGEKL--YTCQKCGKSFNRREYLREHMKIHNGEKL------------ 1275

Query: 661  DRIPCTLCDKTFTRKDSLKKHIRIFHTQNQPQHTNVIEVALGARANAAFIDRIR------ 714
                C  C K+F RK  L  H+RI HT  +P +      +   R N     +I       
Sbjct: 1276 --YTCQKCGKSFARKQYLIIHMRI-HTGEKPYNCQQCGKSFNRRENLKEHMKIHNGEKPY 1332

Query: 715  -CELCDKSFTRKDSLKKHNRIFHGGADPKVMD 745
             C+   KSFT K  LKKH RI H G  P + +
Sbjct: 1333 TCQQRGKSFTCKQHLKKHMRI-HTGEKPSLAN 1363

Source: Danio rerio

Species: Danio rerio

Genus: Danio

Family: Cyprinidae

Order: Cypriniformes

Class: Actinopterygii

Phylum: Chordata

Superkingdom: Eukaryota

>gi|326666983|ref|XP_003198441.1| PREDICTED: zinc finger protein 91-like [Danio rerio]

 Score =  176 bits (446), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 223/811 (27%), Positives = 322/811 (39%), Gaps = 133/811 (16%)

Query: 9   IKSHEYVENHMCELCYKVFESRENLMRHLKIHDDKESKRFKCEQCDKRFSSNAELNKHSS 68
           +++H    + +C  C K F  + +L  H++IH  K  K   C QC KRF+    L+ H S
Sbjct: 1   MRTHTGDRSFICTHCGKRFSQKHDLNIHMRIHTGK--KPHTCTQCGKRFTQKTSLDNHMS 58

Query: 69  AIHQRLKLHECDLCGKNFSQRNNLKRQANGSNVNNRFSSNAELNKHSSAIHQRLKLHECD 128
            IH   K + C  CGK F  +++LK                    H    H   K   C 
Sbjct: 59  -IHTGEKPYRCTECGKTFPHKSSLK--------------------HHMRTHTGEKPFACT 97

Query: 129 LCGKNFSQRNNLKRHLEEVHRTDGMKFECYVCSKVLATSHSLKRHLLIHNGPK-YTCEIC 187
            CGK+F ++  LK H+  +H T    F C  C K    S SL +H+ IH G K +TC  C
Sbjct: 98  QCGKSFERKGYLKIHMM-IH-TGEKPFTCTQCGKSFNRSSSLNKHIKIHTGEKPFTCTQC 155

Query: 188 AKEFTRVYELNIHKKLHEDESVANQLKCEFCGKVFLKKSNLKAH--IENNHLDYSCLECK 245
            K F +   LN H K+H  E       C  CGK F + S L  H  I      ++C +C 
Sbjct: 156 GKSFNQSSYLNNHMKIHTGE---KPFTCTQCGKSFNQSSYLNLHMRIHTGEKPFTCTQCG 212

Query: 246 AVGEEISFDTKKNLLLHLKTKHKNVISNVYLTCLICFKTFLTEVDLGKHMKMHMDDNQIQ 305
                 SF+   +L  H+K            TC  CFK+F     L  HMK+H  +    
Sbjct: 213 R-----SFNRSSSLNKHMKIH----TEEKPFTCTQCFKSFNRSSHLNNHMKIHTGEKPFT 263

Query: 306 CRFCNKYFSRNYNLKQHMKTCTKNVSNGILNCDDNEGEYNGHGSHEENEDDEDYDDMNEM 365
           C  C K FS++  L +HM+    +       C   E  +N                +N+ 
Sbjct: 264 CTQCGKSFSQSTYLNKHMRI---HTGEKPFTCTQCEKSFN------------QSSSLNKH 308

Query: 366 MLVPVIKMELKEENEENEDRENQSEEENYTPVPEVSIKRETDPLSVEDIISAGEVSITPI 425
           M +   +   +    +     NQS   N      ++I     P +      +   S    
Sbjct: 309 MKIHTGEKPFR--CTQCGRSFNQSSHLN----SHMNIHTGEKPFTCTQCGKSFNQS---- 358

Query: 426 PQSNTNNHGSGSTNNTQANKIIQCHICLKTFAKKDSLKKHMKVFHTYISPDAIKE--ESG 483
             S+ N H    T      K   C +C K+F++  SL  HMK  HT   P    +  ES 
Sbjct: 359 --SSLNKHIKIHT----GEKPFTCTLCGKSFSQSSSLNLHMKT-HTGEKPITCTQCGESF 411

Query: 484 EGKPNILEVILQEGKVPNNNAIIQCRICSKTFTRKDSLRKHMRRFHIINDTNVKKEFTEG 543
               N+ E +    K+        C  C K+F++  SL +HM R H       +K FT  
Sbjct: 412 NRSANLNEHM----KIHTAEKPFTCTQCGKSFSKSSSLNQHM-RIHT-----GEKPFTCT 461

Query: 544 QINRNMLDVILKESGHEI----KSRIPCELCYKTFTRKDSLRKHMKIFHTRRNPSANSGN 599
           Q   N    +   + H I    K    C  C K+F++  SL  HM I H    PSA S  
Sbjct: 462 QCG-NSFSYLSSLNKHMIIHTGKKPFTCTQCGKSFSQSSSLNYHMMI-HAGEKPSACS-Q 518

Query: 600 SGTSAPPAVKLEQ----NGGEKVENSTSVENSTSVENSTSVENSANVENTSSVDNRTSVG 655
            G S   +  L +    + GEK  + T    S S   S  ++    +         T   
Sbjct: 519 CGKSFSCSSYLNKHMRIHTGEKPFSCTQCGKSFS--QSLFLKQHMRIH--------TGEK 568

Query: 656 PVAPIDRIPCTLCDKTFTRKDSLKKHIRIFHTQNQPQHTNVIEVALGARANAAFIDRIR- 714
           P +      CT C K+F++  SL  HIRI HT  +P      +       ++ F   +R 
Sbjct: 569 PFS------CTQCGKSFSQSSSLNHHIRI-HTGEKP--FTCTQCGKSFIQSSQFNRHMRI 619

Query: 715 --------CELCDKSFTRKDSLKKHNRIFHGGADPKVMDE--QMARGSADFLEVVLNEDG 764
                   C  C KSF++  SL KH RI H G  P    +  +  R S+     +    G
Sbjct: 620 HAGEKQFTCTQCGKSFSKSSSLNKHMRI-HTGEKPFTCTQCGKSFRRSSHLNHHMRIHTG 678

Query: 765 EGEPVSITNEILCKICNRTFTRNYNLKKHMK 795
           E +P S T       C ++F R+ +LK+HM+
Sbjct: 679 E-KPFSCTQ------CGKSFRRSSSLKQHMR 702

Source: Danio rerio

Species: Danio rerio

Genus: Danio

Family: Cyprinidae

Order: Cypriniformes

Class: Actinopterygii

Phylum: Chordata

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	843
ZFIN|ZDB-GENE-110914-160	1003	si:dkey-240n22.7 "si:dkey-240n	0.370	0.311	0.301	1.1e-50
ZFIN|ZDB-GENE-110913-165	820	si:dkeyp-4f2.4 "si:dkeyp-4f2.4	0.364	0.374	0.314	3.3e-50
ZFIN|ZDB-GENE-110913-173	819	si:dkey-78k22.1 "si:dkey-78k22	0.361	0.372	0.293	6.4e-48
ZFIN|ZDB-GENE-110913-143	984	si:ch211-209p16.3 "si:ch211-20	0.361	0.309	0.316	2.8e-48
ZFIN|ZDB-GENE-110913-38	987	si:ch211-208f21.5 "si:ch211-20	0.358	0.305	0.325	7.1e-36
ZFIN|ZDB-GENE-120703-37	911	si:dkey-78o7.1 "si:dkey-78o7.1	0.361	0.334	0.319	1.3e-43
UNIPROTKB|J9NXY4	816	J9NXY4 "Uncharacterized protei	0.357	0.368	0.318	2.5e-34
ZFIN|ZDB-GENE-110914-166	1002	si:ch73-266f23.2 "si:ch73-266f	0.376	0.316	0.297	2.6e-47
ZFIN|ZDB-GENE-110913-157	981	si:ch211-245n8.1 "si:ch211-245	0.361	0.310	0.307	1.1e-32
UNIPROTKB|Q96IR2	970	ZNF845 "Zinc finger protein 84	0.361	0.314	0.310	8.2e-33

ZFIN|ZDB-GENE-110914-160 si:dkey-240n22.7 "si:dkey-240n22.7" [Danio rerio (taxid:7955)]

 Score = 421 (153.3 bits), Expect = 1.1e-50, Sum P(2) = 1.1e-50
 Identities = 103/342 (30%), Positives = 162/342 (47%)

Query:     8 HIKSHEYVENHMCELCYKVFESRENLMRHLKIHDDKESKRFKCEQCDKRFSSNAELNKHS 67
             H++ H   + ++C +C K F  + +L  H+ IH  +  K ++C+QC K F+    L  H 
Sbjct:   109 HMRIHTGDKPYICTVCGKNFSQKPSLDVHVGIHTGE--KPYQCQQCGKSFNRKQNLQVHM 166

Query:    68 SAIHQRLKLHECDLCGKNFSQRNNLKRQANGSNVNNRFSSN----AELNKHSSAIHQRLK 123
             S IH   K ++C  CGK+F+++ NL+           FS +    +   K + AIH+R+ 
Sbjct:   167 S-IHSGDKPYQCQQCGKSFNRKQNLQVHMRIHTGEKPFSCHQCGKSFSQKRNLAIHRRIH 225

Query:   124 LHE----CDLCGKNFSQRNNLKRHLEEVHRTDGMKFECYVCSKVLATSHSLKRHLLIHNG 179
               E    C  CGK+F+Q+ NLK H+  +H  D   ++C  C K       LK H+ IH G
Sbjct:   226 TGERPYTCQQCGKSFTQKQNLKVHMR-IHTGD-KPYQCQECGKSFIDKQHLKVHMRIHTG 283

Query:   180 PK-YTCEICAKEFTRVYELNIHKKLHEDESVANQLKCEFCGKVFLKKSNLKAHIENNHLD 238
              K Y C+ C K F R     +H ++H  E       C  CG+ F +K NLK H+  +  D
Sbjct:   284 DKPYQCQQCGKSFNRKQNFQVHMRIHTKEK---PFSCHQCGRSFNRKQNLKVHMRVHTGD 340

Query:   239 --YSCLEC-KAVGEEISFDXXXXXXXXXXXXXXXVISNVYLTCLICFKTFLTEVDLGKHM 295
               Y C +C K+  ++ + D                  N + TC  C K+F  +  L  HM
Sbjct:   341 KPYQCQQCGKSFSQKATLDAHMRTHSGL---------NAF-TCQQCGKSFGQKQKLQLHM 390

Query:   296 KMHMDDNQIQCRFCNKYFSRNYNLKQHMKTCTKNVSNGILNC 337
             ++H  +   +C+ C + FS+  +L  H +  TK      L C
Sbjct:   391 RIHSREKPYKCQHCGESFSQKAHLTGHERVHTKEKPYTCLQC 432

GO:0008270 "zinc ion binding" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

ZFIN|ZDB-GENE-110913-165 si:dkeyp-4f2.4 "si:dkeyp-4f2.4" [Danio rerio (taxid:7955)]

 Score = 400 (145.9 bits), Expect = 3.3e-50, Sum P(2) = 3.3e-50
 Identities = 106/337 (31%), Positives = 150/337 (44%)

Query:     3 MIISEHIKSHEYVENHMCELCYKVFESRENLMRHLKIHDDKESKRFKCEQCDKRFSSNAE 62
             + + +H++ H   +   C  C K F    +L RH++IH  +  K F C +C K FS ++ 
Sbjct:    48 LFLKQHMRIHIGDKPFTCTQCGKSFSQSSSLNRHMRIHTGE--KPFTCTRCGKSFSHSSN 105

Query:    63 LNKHSSAIHQRLKLHECDLCGKNFSQRNNL---------KRQANGSNVNNRFSSNAELNK 113
              N+H   IH   K   C  CGK+FSQ +NL         ++    +     FS ++ LN 
Sbjct:   106 FNRHMR-IHTGEKPFTCTQCGKSFSQSSNLNLHMMIHTGEKPFTCTQCGKSFSCSSYLNH 164

Query:   114 HSSAIHQRLKLHECDLCGKNFSQRNNLKRHLEEVHRTDGMKFECYVCSKVLATSHSLKRH 173
             H   IH   KL  C  CGK+FS+  +LK H+  +H T    F C  C K  + S SL  H
Sbjct:   165 HMR-IHTGEKLLSCTRCGKSFSRSLSLKEHMR-IH-TGEKPFTCTQCGKSFSQSSSLNHH 221

Query:   174 LLIHNGPK-YTCEICAKEFTRVYELNIHKKLHEDESVANQLKCEFCGKVFLKKSNLKAH- 231
             +  H G K +TC  C K F++    N H ++H  E       C  CGK F K   LKAH 
Sbjct:   222 MWTHTGEKPFTCTQCGKSFSQSSNFNRHMRIHTGEK---PFTCTQCGKSFPKIHFLKAHM 278

Query:   232 -IENNHLDYSCLECKAVGEEISFDXXXXXXXXXXXXXXXVISNVYLTCLICFKTFLTEVD 290
              I      Y+C +C  +     F                     Y +C  C K+F    +
Sbjct:   279 RIHIGERSYTCQQCGKI-----FHYARNLAAHMRIHTG---EKPY-SCPQCGKSFKQNNN 329

Query:   291 LGKHMKMHMDDNQIQCRFCNKYFSRNYNLKQHMKTCT 327
             L  HM+ H  +    C  C K F++  NLK HM+  T
Sbjct:   330 LEVHMRTHTGERSFTCTQCGKSFAKKQNLKIHMRIHT 366

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

ZFIN|ZDB-GENE-110913-173 si:dkey-78k22.1 "si:dkey-78k22.1" [Danio rerio (taxid:7955)]

 Score = 379 (138.5 bits), Expect = 6.4e-48, Sum P(2) = 6.4e-48
 Identities = 99/337 (29%), Positives = 151/337 (44%)

Query:     5 ISEHIKSHEYVENHMCELCYKVFESRENLMRHLKIHDDKESKRFKCEQCDKRFSSNAELN 64
             +++H++ H   +   C  C   F     L +H++IH  +  K F C QC K F+ ++ L+
Sbjct:    69 LNKHMRIHTGEKPFTCTQCGISFNCSSYLKQHMRIHTGE--KPFTCTQCGKSFNRSSNLD 126

Query:    65 KHSSAIHQRLKLHECDLCGKNFSQRNNLKRQAN---GSN------VNNRFSSNAELNKHS 115
              H   IH   K   C  CGK+F++ +NL +      G            F  ++ L+KH 
Sbjct:   127 HHMR-IHTGEKPFTCTQCGKSFNRSSNLDQHIRIHTGEKPITCTLCGKSFRQSSSLSKHM 185

Query:   116 SAIHQRLKLHECDLCGKNFSQRNNLKRHLEEVHRTDGMKFECYVCSKVLATSHSLKRHLL 175
               IH   K   C  CGK+FSQ +N   H+  +H T    F C  C K    + SL +H+ 
Sbjct:   186 R-IHTGEKPFTCTQCGKSFSQSSNFNLHMR-IH-TGEKPFTCTQCGKSFRQASSLNKHMR 242

Query:   176 IHNGPK-YTCEICAKEFTRVYELNIHKKLHEDESVANQLKCEFCGKVFLKKSNLKAH--I 232
              H G K +TC  C K F R   LN H ++H  E     + C  CGK F + S+L  H  I
Sbjct:   243 THTGEKPFTCTQCGKSFNRSSHLNQHIRIHTGEK---PITCTQCGKSFRQSSSLYKHMRI 299

Query:   233 ENNHLDYSCLEC-KAVGEEISFDXXXXXXXXXXXXXXXVISNVYLTCLICFKTFLTEVDL 291
                   ++C +C K+  +  +F+                     +TC  C K+F     L
Sbjct:   300 HTGEKPFTCTQCGKSFSQSSNFNLHMRIHTGEKP----------ITCTQCGKSFHQSSSL 349

Query:   292 GKHMKMHMDDNQIQCRFCNKYFSRNYNLKQHMKTCTK 328
              KHM++H  +    C  C K F +  +L +HM+  T+
Sbjct:   350 YKHMRIHTGEKPFTCTQCGKSFHQASSLNKHMRIHTE 386

GO:0005622 "intracellular" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0003677 "DNA binding" evidence=IEA

ZFIN|ZDB-GENE-110913-143 si:ch211-209p16.3 "si:ch211-209p16.3" [Danio rerio (taxid:7955)]

 Score = 418 (152.2 bits), Expect = 2.8e-48, Sum P(2) = 2.8e-48
 Identities = 106/335 (31%), Positives = 155/335 (46%)

Query:     5 ISEHIKSHEYVENHMCELCYKVFESRENLMRHLKIHDDKESKRFKCEQCDKRFSSNAELN 64
             +++H++ H   +   C  C K F    +L +H++ H  +  K F C QC K FS  + LN
Sbjct:    22 LNQHMRIHAGEKPSACSQCGKSFSCSSHLNKHMRNHTGE--KPFSCTQCGKSFSYPSALN 79

Query:    65 KHSSAIHQRLKLHECDLCGKNFSQRNNL---------KRQANGSNVNNRFSSNAELNKHS 115
             KH   IH   K   C  CGK+FS  ++L         ++ +  S     FS ++ LNKH 
Sbjct:    80 KHMR-IHTGEKPFSCTQCGKSFSYSSSLNYHMMIHAGEKPSACSQCGKSFSCSSHLNKHM 138

Query:   116 SAIHQRLKLHECDLCGKNFSQRNNLKRHLEEVHRTDGMKFECYVCSKVLATSHSLKRHLL 175
               IH   K   C  CGK+F     LK+H+  +H T    F C  C K  + S SL  H++
Sbjct:   139 M-IHTGKKPFTCTQCGKSFRNSLFLKQHMM-IH-TGEKPFTCTQCGKSFSRSSSLNHHIM 195

Query:   176 IHNGPK-YTCEICAKEFTRVYELNIHKKLHEDESVANQLKCEFCGKVFLKKSNLKAHIEN 234
             IH G K +TC  C K F +  +LN+H ++H  E       C  CGK F + S+LK H+  
Sbjct:   196 IHTGEKPFTCTQCGKSFIQSSQLNLHMRIHTGEK---PFSCTQCGKSFRRSSSLKQHMRT 252

Query:   235 N--HLDYSCLECKAVGEEISFDXXXXXXXXXXXXXXXVISNVYLTCLICFKTFLTEVDLG 292
             +     ++C +C   G+  SF                       TC  C K+F     L 
Sbjct:   253 HTGEKPFTCTQC---GK--SFRRSSHLNHHMRIHT----GEKPFTCTQCGKSFRRSSHLN 303

Query:   293 KHMKMHMDDNQIQCRFCNKYFSRNYNLKQHMKTCT 327
              HM++H  +    C  C K FS++ +L  HM+T T
Sbjct:   304 HHMRIHTGEKPFSCTQCGKSFSKSSSLNHHMRTHT 338

GO:0005622 "intracellular" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

ZFIN|ZDB-GENE-110913-38 si:ch211-208f21.5 "si:ch211-208f21.5" [Danio rerio (taxid:7955)]

 Score = 419 (152.6 bits), Expect = 7.1e-36, P = 7.1e-36
 Identities = 108/332 (32%), Positives = 152/332 (45%)

Query:     8 HIKSHEYVENHMCELCYKVFESRENLMRHLKIHDDKESKRFKCEQCDKRFSSNAELNKHS 67
             H++ H   +   C  C K F    +L  H++IH  +  K F C QC K FS ++ LN H 
Sbjct:   671 HMRIHTGEKPFTCSQCGKSFSQSSSLNLHMRIHTGE--KPFTCTQCGKSFSQSSILNIHM 728

Query:    68 SAIHQRLKLHECDLCGKNFSQRNNLKRQAN---GSNV------NNRFSSNAELNKHSSAI 118
                H   K   C  CGK+FSQ   L +      G N+         FS++A LN H   I
Sbjct:   729 RN-HTGEKPFTCLQCGKSFSQSTYLNQHMRIHTGENLFTCTQCGKSFSNSANLNLHMR-I 786

Query:   119 HQRLKLHECDLCGKNFSQRNNLKRHLEEVHRTDGMKFECYVCSKVLATSHSLKRHLLIHN 178
             H   K   C  CGK+FSQ +NL  H+  +H T    F C  C K  + S  L  H+ IH 
Sbjct:   787 HTGEKPFTCTQCGKSFSQSSNLNIHMR-IH-TGEKPFTCSQCGKSFSQSPYLNHHMRIHT 844

Query:   179 GPK-YTCEICAKEFTRVYELNIHKKLHEDESVANQLKCEFCGKVFLKKSNLKAHIENN-- 235
             G K +TC  C K F++   LNIH ++H  E       C  CG  F + SNL  H+ N+  
Sbjct:   845 GEKPFTCSQCGKSFSKSSNLNIHMRIHTGEK---PFTCTQCGTSFSQSSNLNIHMRNHTG 901

Query:   236 HLDYSCLECKAVGEEISFDXXXXXXXXXXXXXXXVISNVYLTCLICFKTFLTEVDLGKHM 295
                ++CL+C   G+  S                  +      CL C  TF+T  +L +H 
Sbjct:   902 EKPFTCLQC---GKSFSRSTSLNRHMMIHTGEKEFM------CLKCENTFITAAELKRHQ 952

Query:   296 KMHMDDNQIQCRFCNKYFSRNYNLKQHMKTCT 327
             ++H  +   +C  C+K F+R+  LK H +  T
Sbjct:   953 RVHTGEKPYKCSQCSKRFARSGTLKTHERIHT 984

GO:0008270 "zinc ion binding" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

ZFIN|ZDB-GENE-120703-37 si:dkey-78o7.1 "si:dkey-78o7.1" [Danio rerio (taxid:7955)]

 Score = 419 (152.6 bits), Expect = 1.3e-43, Sum P(2) = 1.3e-43
 Identities = 107/335 (31%), Positives = 158/335 (47%)

Query:     5 ISEHIKSHEYVENHMCELCYKVFESRENLMRHLKIHDDKESKRFKCEQCDKRFSSNAELN 64
             +++H++ H   +   C  C K F    NL +H++IH  +  K F C QC K FS++A LN
Sbjct:   392 LNQHMRIHTGEKPFTCTQCGKSFSYSANLNQHMRIHTGE--KPFTCTQCGKSFSNSANLN 449

Query:    65 KHSSAIHQRLKLHECDLCGKNFSQRNNLKRQAN---G------SNVNNRFSSNAELNKHS 115
             +H   IH   K   C  CGK+FSQ + L +      G      S     FS +  LN+H 
Sbjct:   450 QHMR-IHTGEKPFTCTQCGKSFSQSSYLNQHMRIHTGEKPFTCSQCGKSFSQSPYLNQHM 508

Query:   116 SAIHQRLKLHECDLCGKNFSQRNNLKRHLEEVHRTDGMKFECYVCSKVLATSHSLKRHLL 175
               IH   K   C  CGK+FSQ ++L  H+  +H T    F C  C K  + S +L  H+ 
Sbjct:   509 R-IHTGEKPFTCSQCGKSFSQSSSLYLHMR-IH-TGEKPFTCTQCGKSFSKSSNLNIHMR 565

Query:   176 IHNGPK-YTCEICAKEFTRVYELNIHKKLHEDESVANQLKCEFCGKVFLKKSNLKAHIEN 234
              H G K +TC  C K F++   LN+H ++H  E       C  CGK F + SN   H+ N
Sbjct:   566 NHTGEKPFTCLQCGKSFSQSTSLNLHMRIHTGEK---PFTCTQCGKSFSQSSNPNIHMRN 622

Query:   235 N--HLDYSCLECKAVGEEISFDXXXXXXXXXXXXXXXVISNVYLTCLICFKTFLTEVDLG 292
             +     ++C +C     E SF                     ++ CL C  TF+T  +L 
Sbjct:   623 HIGEKPFTCTQC-----EKSFSQSTSLNRQMMIHTG---EKEFM-CLKCENTFITAAELK 673

Query:   293 KHMKMHMDDNQIQCRFCNKYFSRNYNLKQHMKTCT 327
             +H ++H  +   +C  C+K F+R+  LK H +  T
Sbjct:   674 RHQRVHTGEKPYKCSQCSKRFTRSGTLKTHERIHT 708

GO:0005622 "intracellular" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

UNIPROTKB|J9NXY4 J9NXY4 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 403 (146.9 bits), Expect = 2.5e-34, P = 2.5e-34
 Identities = 106/333 (31%), Positives = 152/333 (45%)

Query:     8 HIKSHEYVENHMCELCYKVFESRENLMRHLKIHDDKESKRFKCEQCDKRFSSNAELNKHS 67
             H + H   + + CE C K F    NL +H ++H  ++S  + C++C+K FS    L  H 
Sbjct:   411 HKRIHTGEKPYECEECGKTFRRASNLAQHGRVHIGEKS--YVCKECEKAFSDVGTLRIHQ 468

Query:    68 SAIHQRLKLHECDLCGKNFSQRNNLKRQANGSNVNNR----------FSSNAELNKHSSA 117
               IH   K +EC  CGK FS+R +L R   G +   +          FS  + L +H   
Sbjct:   469 R-IHTGEKPYECKECGKAFSRRTDL-RVHKGIHTGEKPYECKQCGKTFSQASNLMQHDR- 525

Query:   118 IHQRLKLHECDLCGKNFSQRNNLKRHLEEVHRTDGMKFECYVCSKVLATSHSLKRHLLIH 177
             IH   K   C  CGK FSQ ++L RH E +H T    +EC +C K   +SH L  H   H
Sbjct:   526 IHTGEKPFACKNCGKAFSQASHLVRH-ERIH-TGEKPYECKLCDKAFRSSHQLTIHHRFH 583

Query:   178 NGPK-YTCEICAKEFTRVYELNIHKKLHEDESVANQLKCEFCGKVFLKKSNLKAH--IEN 234
              G K Y C+ C K F R  +L +HK++H  E      +CE CGK F + SNL  H  +  
Sbjct:   584 TGEKPYVCKECGKAFIRFTDLRVHKRIHTGEK---PYECEECGKAFSRASNLAQHGRVHT 640

Query:   235 NHLDYSCLECKAVGEEISFDXXXXXXXXXXXXXXXVISNVYLTCLICFKTFLTEVDLGKH 294
                 Y C EC+    ++                       Y  C  C KTF    +L +H
Sbjct:   641 GEKSYVCKECEKAFSDVG--------TLRIHQRIHTGEKPY-ECKQCGKTFSQASNLIQH 691

Query:   295 MKMHMDDNQIQCRFCNKYFSRNYNLKQHMKTCT 327
              ++H  +    C+ C K FS+  +L +H +  T
Sbjct:   692 DRIHTGEKPFACKNCGKAFSQASHLVRHERIHT 724

GO:0008270 "zinc ion binding" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

ZFIN|ZDB-GENE-110914-166 si:ch73-266f23.2 "si:ch73-266f23.2" [Danio rerio (taxid:7955)]

 Score = 381 (139.2 bits), Expect = 2.6e-47, Sum P(2) = 2.6e-47
 Identities = 104/350 (29%), Positives = 152/350 (43%)

Query:     1 MQMIISEHIKSHEYVENHMCELCYKVFESRENLMRHLKIHDDKESKRFKCEQCDKRFSSN 60
             ++  +  H + H   +   C+ C + F   +++  H+K H  +  K + C+QC K F+  
Sbjct:    74 LKQALEIHTRIHTGEKPFSCQQCGRSFSQIQSIKHHMKTHTGE--KPYNCQQCGKLFTRK 131

Query:    61 AELNKHSSAIHQRLKLHECDLCGKNFSQRNNLK---RQANGSN------VNNRFSSNAEL 111
               LN H ++ H   K   CD CGK F+ + NL    R   G           RF     L
Sbjct:   132 TSLNAHMNS-HTGEKPIACDQCGKGFAHKQNLTVHMRVHTGEKPFPCQYCGKRFRQLQNL 190

Query:   112 NKHSSAIHQRLKLHECDLCGKNFSQRNNLKRHLEEVHRTDGMKFECYVCSKVLATSHSLK 171
               H +A H   K + C  C K+F ++   ++H+  VH T    F C  C + LA+   LK
Sbjct:   191 KFHITA-HTGEKPYTCPHCPKSFDRKKKCEKHIR-VH-TGEKPFACQQCGRSLASKDLLK 247

Query:   172 RHLLIHNGPK-YTCEICAKEFTRVYELNIHKKLHEDESVANQLKCEFCGKVFLKKSNLKA 230
             +HL IH+G + YTC+ C K FT    L +H ++H  E       C  CGK + +K+ L  
Sbjct:   248 KHLKIHSGERPYTCQECGKSFTETERLRVHMRIHTGE---RPYTCSQCGKSYTQKNCLDY 304

Query:   231 H--IENNHLDYSCLECKAVGEEISFDXXXXXXXXXXXXXXXVISNVYLTCLICFKTFLTE 288
             H  I      Y+C +C   G+  SF                        C+ C K+F  E
Sbjct:   305 HVRIHTGEKPYNCTQC---GK--SFKCRTSQIRHMNIHT----GEKPFACVQCGKSFAQE 355

Query:   289 VDLGKHMKMHMDDNQIQCRFCNKYFSRNYNLKQHMKTCTKNVSNGILNCD 338
               L  H+  H       C  C K F+R  NLK+H KT   N  + I  CD
Sbjct:   356 FHLRNHVICHTGAKPFTCDQCGKSFTRKDNLKEH-KTIHTNDKSFI--CD 402

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

ZFIN|ZDB-GENE-110913-157 si:ch211-245n8.1 "si:ch211-245n8.1" [Danio rerio (taxid:7955)]

 Score = 390 (142.3 bits), Expect = 1.1e-32, P = 1.1e-32
 Identities = 103/335 (30%), Positives = 149/335 (44%)

Query:     5 ISEHIKSHEYVENHMCELCYKVFESRENLMRHLKIHDDKESKRFKCEQCDKRFSSNAELN 64
             +++HI+ H   +   C  C K F    +L +H++IH  +  K F C QC K FS ++  N
Sbjct:   581 LNQHIRIHTGEKPITCTQCGKSFRQSSSLYKHMRIHTGE--KPFTCTQCGKSFSQSSNFN 638

Query:    65 KHSSAIHQRLKLHECDLCGKNFSQRNNLKRQAN---G------SNVNNRFSSNAELNKHS 115
              H   IH   K   C  CGK+F Q ++L +      G      +     F   + LNKH 
Sbjct:   639 LHMR-IHTGEKPITCTQCGKSFHQSSSLYKHMRIHTGEKPFTCTQCGKSFRQASSLNKHM 697

Query:   116 SAIHQRLKLHECDLCGKNFSQRNNLKRHLEEVHRTDGMKFECYVCSKVLATSHSLKRHLL 175
               IH   K   C  CGK+F Q ++L +H+  +H T    F C  C K    + SL +H+ 
Sbjct:   698 R-IHTGEKPITCTQCGKSFRQSSSLYKHMR-IH-TGEKPFTCTQCGKSFRQTSSLNKHMR 754

Query:   176 IHNGPK-YTCEICAKEFTRVYELNIHKKLHEDESVANQLKCEFCGKVFLKKSNLKAH--I 232
             IH G K +TC  C   F     L  H ++H  E       C  CG+ F + SNL  H  I
Sbjct:   755 IHTGEKPFTCTQCGISFNCSSYLKQHMRIHTGEK---PFTCTQCGRSFNRSSNLDHHMRI 811

Query:   233 ENNHLDYSCLECKAVGEEISFDXXXXXXXXXXXXXXXVISNVYLTCLICFKTFLTEVDLG 292
                   ++C +C   G+  SF+                     +TC +C K+F     L 
Sbjct:   812 HTGEKPFTCTQC---GK--SFNRSSNLDQHIRIHT----GEKPITCTLCGKSFRQSSSLS 862

Query:   293 KHMKMHMDDNQIQCRFCNKYFSRNYNLKQHMKTCT 327
             KHM+ H  +    C  C K F+R+ NL QH++  T
Sbjct:   863 KHMRTHTGEKPFTCTQCGKSFNRSSNLDQHIRIHT 897

GO:0008270 "zinc ion binding" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

UNIPROTKB|Q96IR2 ZNF845 "Zinc finger protein 845" [Homo sapiens (taxid:9606)]

 Score = 391 (142.7 bits), Expect = 8.2e-33, P = 8.2e-33
 Identities = 104/335 (31%), Positives = 153/335 (45%)

Query:     5 ISEHIKSHEYVENHMCELCYKVFESRENLMRHLKIHDDKESKRFKCEQCDKRFSSNAELN 64
             I+ H + H    ++ C  C K F  R  L  H + H  +  K +KCE+CD+ FS  + L 
Sbjct:   594 IANHWRIHNEERSYKCNRCGKFFRHRSYLAVHWRTHSGE--KPYKCEECDEAFSFKSNLQ 651

Query:    65 KHSSAIHQRLKLHECDLCGKNFSQRNNL---KRQANG------SNVNNRFSSNAELNKHS 115
             +H   IH   K + C+ CGK FS+++ L   +R   G      +     F  N+ L  H 
Sbjct:   652 RHRR-IHTGEKPYRCNECGKTFSRKSYLTCHRRLHTGEKPYKCNECGKTFGRNSALIIHK 710

Query:   116 SAIHQRLKLHECDLCGKNFSQRNNLKRHLEEVHRTDGMKFECYVCSKVLATSHSLKRHLL 175
              AIH   K ++C+ CGK FSQ+++L  HL  +H T    ++C  C KV +   SL++H  
Sbjct:   711 -AIHTGEKPYKCNECGKAFSQKSSLTCHLR-LH-TGEKPYKCEECDKVFSRKSSLEKHRR 767

Query:   176 IHNGPK-YTCEICAKEFTRVYELNIHKKLHEDESVANQLKCEFCGKVFLKKSNLKAH--I 232
             IH G K Y C++C K F R   L  H ++H  E      KC  CGK F   S L  H  I
Sbjct:   768 IHTGEKPYKCKVCDKAFGRDSHLAQHTRIHTGEK---PYKCNECGKNFRHNSALVIHKAI 824

Query:   233 ENNHLDYSCLECKAVGEEISFDXXXXXXXXXXXXXXXVISNVYLTCLICFKTFLTEVDLG 292
              +    Y C EC   G+    +                    Y  C  C K F  + +L 
Sbjct:   825 HSGEKPYKCNEC---GKTFRHNSALEIHKAIHTG-----EKPY-KCSECGKVFNRKANLS 875

Query:   293 KHMKMHMDDNQIQCRFCNKYFSRNYNLKQHMKTCT 327
             +H ++H  +   +C  C K F++  +L  H +  T
Sbjct:   876 RHHRLHTGEKPYKCNKCGKVFNQQAHLACHHRIHT 910

GO:0008270 "zinc ion binding" evidence=IEA

GO:0003677 "DNA binding" evidence=IEA

GO:0006351 "transcription, DNA-dependent" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

No hit with e-value below 0.005

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	843
KOG1074|consensus	958		99.96
KOG1074|consensus	958		99.96
KOG3608|consensus	467		99.95
KOG3608|consensus	467		99.95
KOG2462|consensus	279		99.92
KOG3623|consensus	1007		99.91
KOG2462|consensus	279		99.9
KOG3623|consensus	1007		99.83
KOG3576|consensus	267		99.63
KOG3576|consensus	267		99.6
KOG1146|consensus	1406		99.19
PLN03086	567	PRLI-interacting factor K; Provisional	99.09
KOG1146|consensus	1406		99.05
PLN03086	567	PRLI-interacting factor K; Provisional	99.04
KOG3993|consensus	500		99.0
PHA00733	128	hypothetical protein	98.94
PHA00733	128	hypothetical protein	98.81
PHA02768	55	hypothetical protein; Provisional	98.75
KOG3993|consensus	500		98.64
PHA02768	55	hypothetical protein; Provisional	98.62
PF13465	26	zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A	98.4
PF13465	26	zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A	98.37
PF05605	54	zf-Di19: Drought induced 19 protein (Di19), zinc-b	98.29
PF05605	54	zf-Di19: Drought induced 19 protein (Di19), zinc-b	98.28
PHA00732	79	hypothetical protein	98.21
PHA00616	44	hypothetical protein	98.17
PHA00732	79	hypothetical protein	98.1
PHA00616	44	hypothetical protein	98.05
PF00096	23	zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR0070	97.82
PF00096	23	zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR0070	97.76
PF13894	24	zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP	97.67
KOG2231|consensus	669		97.57
PF12756	100	zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB:	97.57
PF13894	24	zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP	97.44
PF12756	100	zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB:	97.43
COG5189	423	SFP1 Putative transcriptional repressor regulating	97.38
KOG2231|consensus	669		97.29
PF13912	27	zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9	97.28
PF13912	27	zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9	97.27
KOG2785|consensus	390		97.07
KOG2785|consensus	390		97.06
PF13909	24	zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W	96.89
KOG2482|consensus	423		96.88
PF13909	24	zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W	96.77
COG5189	423	SFP1 Putative transcriptional repressor regulating	96.75
COG5236	493	Uncharacterized conserved protein, contains RING Z	96.64
PF09237	54	GAGA: GAGA factor; InterPro: IPR015318 Zinc finger	96.59
PF09237	54	GAGA: GAGA factor; InterPro: IPR015318 Zinc finger	96.53
KOG4173|consensus	253		96.52
smart00355	26	ZnF_C2H2 zinc finger.	96.52
PF12874	25	zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG	96.37
KOG2482|consensus	423		96.33
smart00355	26	ZnF_C2H2 zinc finger.	96.29
COG5236	493	Uncharacterized conserved protein, contains RING Z	96.23
PF12874	25	zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG	95.82
PF12171	27	zf-C2H2_jaz: Zinc-finger double-stranded RNA-bindi	95.43
PF12171	27	zf-C2H2_jaz: Zinc-finger double-stranded RNA-bindi	95.26
COG5048	467	FOG: Zn-finger [General function prediction only]	94.39
PRK04860	160	hypothetical protein; Provisional	94.15
KOG4173|consensus	253		94.03
PF12013	109	DUF3505: Protein of unknown function (DUF3505); In	93.9
PRK04860	160	hypothetical protein; Provisional	93.65
PF13913	25	zf-C2HC_2: zinc-finger of a C2HC-type	93.39
COG4049	65	Uncharacterized protein containing archaeal-type C	93.34
PF12013	109	DUF3505: Protein of unknown function (DUF3505); In	93.17
PF13913	25	zf-C2HC_2: zinc-finger of a C2HC-type	92.57
smart00451	35	ZnF_U1 U1-like zinc finger. Family of C2H2-type zi	92.07
smart00451	35	ZnF_U1 U1-like zinc finger. Family of C2H2-type zi	91.97
COG5048	467	FOG: Zn-finger [General function prediction only]	91.56
KOG2893|consensus	341		91.41
KOG2893|consensus	341		91.39
COG4049	65	Uncharacterized protein containing archaeal-type C	88.49
TIGR00622	112	ssl1 transcription factor ssl1. This family is bas	86.76
cd00350	33	rubredoxin_like Rubredoxin_like; nonheme iron bind	83.32
PHA00626	59	hypothetical protein	83.21
PF02892	45	zf-BED: BED zinc finger; InterPro: IPR003656 Zinc	82.56

>KOG1074|consensus

Probab=99.96  E-value=8.2e-31  Score=266.54  Aligned_cols=294  Identities=22%  Similarity=0.356  Sum_probs=176.6

Q ss_pred             eeecCcChhccCChHHHHHHHHHhcCCCceeccccchhcCChhhHHHHHHHccCCCCCCcccCCCCccccCCCCCCCCCC
Q psy8169         275 YLTCLICFKTFLTEVDLGKHMKMHMDDNQIQCRFCNKYFSRNYNLKQHMKTCTKNVSNGILNCDDNEGEYNGHGSHEENE  354 (843)
Q Consensus       275 ~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~~c~~~~~~~~~~~~~~~~~  354 (843)
                      +-.|.+|.+.......|+.|+++|+|++||+|.+|++.|.++.+|+.|+.+|....+                       
T Consensus       605 PNqCiiC~rVlSC~saLqmHyrtHtGERPFkCKiCgRAFtTkGNLkaH~~vHka~p~-----------------------  661 (958)
T KOG1074|consen  605 PNQCIICLRVLSCPSALQMHYRTHTGERPFKCKICGRAFTTKGNLKAHMSVHKAKPP-----------------------  661 (958)
T ss_pred             ccceeeeeecccchhhhhhhhhcccCcCccccccccchhccccchhhcccccccCcc-----------------------
Confidence            457999999999999999999999999999999999999999999999998864332                       


Q ss_pred             CCCCcchhchhhhhhHHHhhhhhhhhhhhhhhhcccccccCCCCcccccccCCCcchhhhccCCcccccCCCCCCCCCCC
Q psy8169         355 DDEDYDDMNEMMLVPVIKMELKEENEENEDRENQSEEENYTPVPEVSIKRETDPLSVEDIISAGEVSITPIPQSNTNNHG  434 (843)
Q Consensus       355 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  434 (843)
                                                                                                      
T Consensus       662 --------------------------------------------------------------------------------  661 (958)
T KOG1074|consen  662 --------------------------------------------------------------------------------  661 (958)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             CCCCCCCCCCCceecc---cccccccChHHHHHHHHhhccC-CCCcccccccCCCCcchhhhHhhhccCCCCCCcccccc
Q psy8169         435 SGSTNNTQANKIIQCH---ICLKTFAKKDSLKKHMKVFHTY-ISPDAIKEESGEGKPNILEVILQEGKVPNNNAIIQCRI  510 (843)
Q Consensus       435 ~~~~~~~~~~~~~~C~---~C~~~f~~~~~L~~H~~~~H~~-~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~C~~  510 (843)
                              ..-.|.|+   +|.+.|.+.-.|.+|+++ |.+ ..+...       .+  .+.+.         ..-+|..
T Consensus       662 --------~R~q~ScP~~~ic~~kftn~V~lpQhIri-H~~~~~s~g~-------~a--~e~~~---------~adq~~~  714 (958)
T KOG1074|consen  662 --------ARVQFSCPSTFICQKKFTNAVTLPQHIRI-HLGGQISNGG-------TA--AEGIL---------AADQCSS  714 (958)
T ss_pred             --------ccccccCCchhhhcccccccccccceEEe-ecCCCCCCCc-------cc--ccccc---------hhcccch
Confidence                    11347899   999999999999999999 653 222110       00  01110         1147999


Q ss_pred             cccccCChHHHHHHHhhhccccCcchhhhhhhhhhhhhhhHHHHhhcccCCCC----CcccccccccccchHHHHHHHHH
Q psy8169         511 CSKTFTRKDSLRKHMRRFHIINDTNVKKEFTEGQINRNMLDVILKESGHEIKS----RIPCELCYKTFTRKDSLRKHMKI  586 (843)
Q Consensus       511 C~~~f~~~~~L~~H~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~C~~C~~~f~~~~~L~~H~~~  586 (843)
                      |.+.|.....+..++.. |.......              +..+....++.+.    ++.+..|+..+.....+..+-..
T Consensus       715 ~qk~~~~a~~f~~~~se-~~~~~s~~--------------~~~~~~~t~t~~~~~tp~~~e~~~~~~~~~e~~i~~~g~t  779 (958)
T KOG1074|consen  715 CQKTFSDARSFSQQISE-QPSPESEP--------------DEQMDERTETEELDVTPPPPENSCGRELEGEMAISVRGST  779 (958)
T ss_pred             hhhcccccccchhhhhc-cCCcccCC--------------cccccccccccccccCCCccccccccccCcccccccccch
Confidence            99999999999999887 42211100              0001111122222    67789999999888877766544


Q ss_pred             hhccCCCCCCCCCCCCCCCcchhhhccCCcccc-----------cCc----cccCccc-ccCCC-ccc-ccCC-cC--CC
Q psy8169         587 FHTRRNPSANSGNSGTSAPPAVKLEQNGGEKVE-----------NST----SVENSTS-VENST-SVE-NSAN-VE--NT  645 (843)
Q Consensus       587 ~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~----~~~~~~~-~~~~~-~~~-~~~~-~~--~~  645 (843)
                      . ........  ............+..+.++..           ...    ...+... ..+.. ..+ +... ..  +.
T Consensus       780 e-~asa~~~~--vg~~s~~~~~~~~~~T~~k~~~~~~~~~~~~~~~v~~~pvl~~~~~~~l~eg~~t~~n~~t~~~~~~s  856 (958)
T KOG1074|consen  780 E-EASANLDE--VGTVSAAGEAGEEDDTSEKPTQASSFPGEILAPSVNMDPVLWNQETSMLNEGLATKTNEITPEGPADS  856 (958)
T ss_pred             h-hhhcChhh--hcCccccchhhhhcccCCCCcccccCCCcCCccccccCchhhcccccccccccccccccccCCCcchh
Confidence            2 10000000  000000000000000000000           000    0000000 00000 000 0000 00  00


Q ss_pred             ccccCCCCCCCC------CCCCCCCCccccccccchhhhhhhhhccccCCCCCCccchhhcccccccccccccccccchh
Q psy8169         646 SSVDNRTSVGPV------APIDRIPCTLCDKTFTRKDSLKKHIRIFHTQNQPQHTNVIEVALGARANAAFIDRIRCELCD  719 (843)
Q Consensus       646 ~~~~~~~~~~p~------~~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~p~~~~~~~~~~~~~~~~~~~~~~~C~~C~  719 (843)
                      .......+..++      +-.....|.+||+.|.+.++|..|+++ |++++|                     |.|.+|+
T Consensus       857 v~qs~~~p~l~p~l~~~~pvnn~h~C~vCgk~FsSSsALqiH~rT-Htg~KP---------------------F~C~fC~  914 (958)
T KOG1074|consen  857 VIQSGGVPTLEPSLGRPGPVNNAHVCNVCGKQFSSSAALEIHMRT-HTGPKP---------------------FFCHFCE  914 (958)
T ss_pred             hhhhccccccCCCCCCCCcccchhhhccchhcccchHHHHHhhhc-CCCCCC---------------------ccchhhh
Confidence            000000000010      111236799999999999999999999 999999                     9999999


Q ss_pred             hhhhhHHHHhhhhhhhcCC
Q psy8169         720 KSFTRKDSLKKHNRIFHGG  738 (843)
Q Consensus       720 ~~f~~~~~L~~H~~~~H~~  738 (843)
                      +.|+++.+|+.||..|++.
T Consensus       915 ~aFttrgnLKvHMgtH~w~  933 (958)
T KOG1074|consen  915 EAFTTRGNLKVHMGTHMWV  933 (958)
T ss_pred             hhhhhhhhhhhhhcccccc
Confidence            9999999999999998883

>KOG1074|consensus

Probab=99.96  E-value=1.9e-29  Score=256.68  Aligned_cols=115  Identities=32%  Similarity=0.632  Sum_probs=96.6

Q ss_pred             cccccchhHhhcCHHHHHHHHhhccCccccCccccCcccccccchhhHHHhhhhcCCCccCCccccCCcccccCCHHHHH
Q psy8169         181 KYTCEICAKEFTRVYELNIHKKLHEDESVANQLKCEFCGKVFLKKSNLKAHIENNHLDYSCLECKAVGEEISFDTKKNLL  260 (843)
Q Consensus       181 ~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~C~~C~~~~~~~~~~~~~~l~  260 (843)
                      +-+|-+|.++..-...|+.|.++|+++   ++|+|.+|++.|.++.+|+.|| .+|+.                      
T Consensus       605 PNqCiiC~rVlSC~saLqmHyrtHtGE---RPFkCKiCgRAFtTkGNLkaH~-~vHka----------------------  658 (958)
T KOG1074|consen  605 PNQCIICLRVLSCPSALQMHYRTHTGE---RPFKCKICGRAFTTKGNLKAHM-SVHKA----------------------  658 (958)
T ss_pred             ccceeeeeecccchhhhhhhhhcccCc---Cccccccccchhccccchhhcc-ccccc----------------------
Confidence            378999999999999999999999999   9999999999999999999998 66631                      


Q ss_pred             HHHhhhcCCCCCcceeecC---cChhccCChHHHHHHHHHhcCCC-------------ceeccccchhcCChhhHHHHHH
Q psy8169         261 LHLKTKHKNVISNVYLTCL---ICFKTFLTEVDLGKHMKMHMDDN-------------QIQCRFCNKYFSRNYNLKQHMK  324 (843)
Q Consensus       261 ~H~~~~~~~~~~~~~~~C~---~C~~~f~~~~~L~~H~~~H~~~~-------------~~~C~~C~~~f~~~~~L~~H~~  324 (843)
                           .++.   +..+.|+   +|.+.|.+...|..|+++|.+..             .-+|..|.+.|.....+..++.
T Consensus       659 -----~p~~---R~q~ScP~~~ic~~kftn~V~lpQhIriH~~~~~s~g~~a~e~~~~adq~~~~qk~~~~a~~f~~~~s  730 (958)
T KOG1074|consen  659 -----KPPA---RVQFSCPSTFICQKKFTNAVTLPQHIRIHLGGQISNGGTAAEGILAADQCSSCQKTFSDARSFSQQIS  730 (958)
T ss_pred             -----Cccc---cccccCCchhhhcccccccccccceEEeecCCCCCCCcccccccchhcccchhhhcccccccchhhhh
Confidence                 1111   1258899   99999999999999999998431             1479999999999999999988


Q ss_pred             HccCC
Q psy8169         325 TCTKN  329 (843)
Q Consensus       325 ~h~~~  329 (843)
                      .+...
T Consensus       731 e~~~~  735 (958)
T KOG1074|consen  731 EQPSP  735 (958)
T ss_pred             ccCCc
Confidence            87443

>KOG3608|consensus

Probab=99.95  E-value=1.8e-27  Score=216.86  Aligned_cols=315  Identities=22%  Similarity=0.422  Sum_probs=225.6

Q ss_pred             chhhcCCHHHHHHHHhhc----cC---------CCCCccccc--ccccccCC-HHHHHHhHHhhccCCCceeCCCCCCcc
Q psy8169          23 CYKVFESRENLMRHLKIH----DD---------KESKRFKCE--QCDKRFSS-NAELNKHSSAIHQRLKLHECDLCGKNF   86 (843)
Q Consensus        23 C~~~f~~~~~l~~H~~~h----~~---------~~~~~~~C~--~C~~~f~~-~~~l~~H~~~~h~~~~~~~C~~C~~~f   86 (843)
                      |.+...+..+|..|+..|    ..         +....+.|.  .|++..-+ ...|.+|+ ..|.-..  +|..     
T Consensus        32 C~~~C~~~~s~~~h~~dHL~~h~~~~~e~~~~~eh~de~qC~w~~C~f~~~~~s~~l~RHv-y~H~y~~--~l~q-----  103 (467)
T KOG3608|consen   32 CQEICTGEWSLNGHIGDHLEHHAKAQDERGAHAEHTDEHQCTWNSCDFRTENSSADLIRHV-YFHCYHT--KLKQ-----  103 (467)
T ss_pred             hhhhhcchhhhhhHHHHHHHhhhccccccccccccccceeEEeccCCccccchHHHHHhhh-hhhhhHH--HHHH-----
Confidence            556666666666555443    21         111257785  58887766 58899997 5552110  0000     


Q ss_pred             cchhhHHhhhcCCCCCCCCCChHHHhhhhhhhhcCCCcccCCc--chhccCChhHHHHhHhhhcCC-----------CC-
Q psy8169          87 SQRNNLKRQANGSNVNNRFSSNAELNKHSSAIHQRLKLHECDL--CGKNFSQRNNLKRHLEEVHRT-----------DG-  152 (843)
Q Consensus        87 ~~~~~l~~H~~~~~~~~~~~~~~~l~~h~~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~~h~~-----------~~-  152 (843)
                      .-+..|..|.-...|.-.|....       .+......|.|.+  |+..|.+...|..|+. .|..           ++ 
T Consensus       104 ~G~~al~~~~dig~c~~~f~~~~-------~ip~~g~~f~C~WedCe~~F~s~~ef~dHV~-~H~l~ceyd~~~~~~D~~  175 (467)
T KOG3608|consen  104 QGKLALDLHPDIGACTAPFRLME-------KIPALGQNFRCGWEDCEREFVSIVEFQDHVV-KHALFCEYDIQKTPEDER  175 (467)
T ss_pred             HHHHHHhcCCCcCcccCCcchhh-------ccccchhhhccChhhcCCcccCHHHHHHHHH-HhhhhhhhhhhhCCCCCC
Confidence            00111111211111111111111       1112223477875  9999999999999987 3411           12 


Q ss_pred             cccccc--cccccccCHHHHHHHHhhcCCCc-ccccchhHhhcCHHHHHHHHhhccCccccCccccCcccccccchhhHH
Q psy8169         153 MKFECY--VCSKVLATSHSLKRHLLIHNGPK-YTCEICAKEFTRVYELNIHKKLHEDESVANQLKCEFCGKVFLKKSNLK  229 (843)
Q Consensus       153 ~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~-~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~~C~~C~~~f~~~~~l~  229 (843)
                      ..+.|.  .|-+.|.++..|++|++.|.+++ ..|+.|+.-|.++..|..|++..+.... ++|+|..|.+.|.+...|.
T Consensus       176 pv~~C~W~~Ct~~~~~k~~LreH~r~Hs~eKvvACp~Cg~~F~~~tkl~DH~rRqt~l~~-n~fqC~~C~KrFaTeklL~  254 (467)
T KOG3608|consen  176 PVTMCNWAMCTKHMGNKYRLREHIRTHSNEKVVACPHCGELFRTKTKLFDHLRRQTELNT-NSFQCAQCFKRFATEKLLK  254 (467)
T ss_pred             ceeeccchhhhhhhccHHHHHHHHHhcCCCeEEecchHHHHhccccHHHHHHHhhhhhcC-CchHHHHHHHHHhHHHHHH
Confidence            235564  49999999999999999999988 8999999999999999999987765432 6899999999999999999


Q ss_pred             HhhhhcCCCccCCccccCCcccccCCHHHHHHHHhhhcCCCCCcceeecCcChhccCChHHHHHHHHH-hcCCCceeccc
Q psy8169         230 AHIENNHLDYSCLECKAVGEEISFDTKKNLLLHLKTKHKNVISNVYLTCLICFKTFLTEVDLGKHMKM-HMDDNQIQCRF  308 (843)
Q Consensus       230 ~H~~~~H~~~~C~~C~~~~~~~~~~~~~~l~~H~~~~~~~~~~~~~~~C~~C~~~f~~~~~L~~H~~~-H~~~~~~~C~~  308 (843)
                      .|+. .|                          +.          .|+|+.|+.+....++|..|++. |..++||+|+.
T Consensus       255 ~Hv~-rH--------------------------vn----------~ykCplCdmtc~~~ssL~~H~r~rHs~dkpfKCd~  297 (467)
T KOG3608|consen  255 SHVV-RH--------------------------VN----------CYKCPLCDMTCSSASSLTTHIRYRHSKDKPFKCDE  297 (467)
T ss_pred             HHHH-Hh--------------------------hh----------cccccccccCCCChHHHHHHHHhhhccCCCccccc
Confidence            9983 22                          11          38899999999999999999985 88899999999


Q ss_pred             cchhcCChhhHHHHHHHccCCCCCCcccCCCCccccCCCCCCCCCCCCCCcchhchhhhhhHHHhhhhhhhhhhhhhhhc
Q psy8169         309 CNKYFSRNYNLKQHMKTCTKNVSNGILNCDDNEGEYNGHGSHEENEDDEDYDDMNEMMLVPVIKMELKEENEENEDRENQ  388 (843)
Q Consensus       309 C~~~f~~~~~L~~H~~~h~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  388 (843)
                      |++.|.+...|.+|+..|.                                                             
T Consensus       298 Cd~~c~~esdL~kH~~~HS-------------------------------------------------------------  316 (467)
T KOG3608|consen  298 CDTRCVRESDLAKHVQVHS-------------------------------------------------------------  316 (467)
T ss_pred             hhhhhccHHHHHHHHHhcc-------------------------------------------------------------
Confidence            9999999999999998764                                                             


Q ss_pred             ccccccCCCCcccccccCCCcchhhhccCCcccccCCCCCCCCCCCCCCCCCCCCCCceeccc--ccccccChHHHHHHH
Q psy8169         389 SEEENYTPVPEVSIKRETDPLSVEDIISAGEVSITPIPQSNTNNHGSGSTNNTQANKIIQCHI--CLKTFAKKDSLKKHM  466 (843)
Q Consensus       389 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~--C~~~f~~~~~L~~H~  466 (843)
                                                                             +..|.|..  |.++|.+...|++|+
T Consensus       317 -------------------------------------------------------~~~y~C~h~~C~~s~r~~~q~~~H~  341 (467)
T KOG3608|consen  317 -------------------------------------------------------KTVYQCEHPDCHYSVRTYTQMRRHF  341 (467)
T ss_pred             -------------------------------------------------------ccceecCCCCCcHHHHHHHHHHHHH
Confidence                                                                   12488988  999999999999999


Q ss_pred             HhhccCCCCcccccccCCCCcchhhhHhhhccCCCCCCcccccccccccCChHHHHHHHhhhccccCcc
Q psy8169         467 KVFHTYISPDAIKEESGEGKPNILEVILQEGKVPNNNAIIQCRICSKTFTRKDSLRKHMRRFHIINDTN  535 (843)
Q Consensus       467 ~~~H~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~  535 (843)
                      +.+|.+..|                            .+|.|..|++.|++-.+|.+|+++.|...-+.
T Consensus       342 ~evhEg~np----------------------------~~Y~CH~Cdr~ft~G~~L~~HL~kkH~f~~Ps  382 (467)
T KOG3608|consen  342 LEVHEGNNP----------------------------ILYACHCCDRFFTSGKSLSAHLMKKHGFRLPS  382 (467)
T ss_pred             HHhccCCCC----------------------------CceeeecchhhhccchhHHHHHHHhhcccCCC
Confidence            998866322                            23999999999999999999999988754433

>KOG3608|consensus

Probab=99.95  E-value=4.8e-27  Score=214.13  Aligned_cols=232  Identities=25%  Similarity=0.454  Sum_probs=191.5

Q ss_pred             cccCCcccccCCHHHHHHHHhhhcC---------CCCCcceeecCc--ChhccCChHHHHHHHHHhcCCCceeccccchh
Q psy8169         244 CKAVGEEISFDTKKNLLLHLKTKHK---------NVISNVYLTCLI--CFKTFLTEVDLGKHMKMHMDDNQIQCRFCNKY  312 (843)
Q Consensus       244 C~~~~~~~~~~~~~~l~~H~~~~~~---------~~~~~~~~~C~~--C~~~f~~~~~L~~H~~~H~~~~~~~C~~C~~~  312 (843)
                      |++.+|+..|.+...+..|+..|.-         .......+-|..  |.+.|.++..|+.|++.|++++...|+.|+..
T Consensus       137 C~WedCe~~F~s~~ef~dHV~~H~l~ceyd~~~~~~D~~pv~~C~W~~Ct~~~~~k~~LreH~r~Hs~eKvvACp~Cg~~  216 (467)
T KOG3608|consen  137 CGWEDCEREFVSIVEFQDHVVKHALFCEYDIQKTPEDERPVTMCNWAMCTKHMGNKYRLREHIRTHSNEKVVACPHCGEL  216 (467)
T ss_pred             cChhhcCCcccCHHHHHHHHHHhhhhhhhhhhhCCCCCCceeeccchhhhhhhccHHHHHHHHHhcCCCeEEecchHHHH
Confidence            4444445556666665555544321         122234567764  99999999999999999999999999999999


Q ss_pred             cCChhhHHHHHHHccCCCCCCcccCCCCccccCCCCCCCCCCCCCCcchhchhhhhhHHHhhhhhhhhhhhhhhhccccc
Q psy8169         313 FSRNYNLKQHMKTCTKNVSNGILNCDDNEGEYNGHGSHEENEDDEDYDDMNEMMLVPVIKMELKEENEENEDRENQSEEE  392 (843)
Q Consensus       313 f~~~~~L~~H~~~h~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  392 (843)
                      |.++..|..|++.-+.                                                                
T Consensus       217 F~~~tkl~DH~rRqt~----------------------------------------------------------------  232 (467)
T KOG3608|consen  217 FRTKTKLFDHLRRQTE----------------------------------------------------------------  232 (467)
T ss_pred             hccccHHHHHHHhhhh----------------------------------------------------------------
Confidence            9999999999986431                                                                


Q ss_pred             ccCCCCcccccccCCCcchhhhccCCcccccCCCCCCCCCCCCCCCCCCCCCCceecccccccccChHHHHHHHHhhccC
Q psy8169         393 NYTPVPEVSIKRETDPLSVEDIISAGEVSITPIPQSNTNNHGSGSTNNTQANKIIQCHICLKTFAKKDSLKKHMKVFHTY  472 (843)
Q Consensus       393 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~  472 (843)
                                                                       ....+|+|..|.+.|.+...|..|+.. |..
T Consensus       233 -------------------------------------------------l~~n~fqC~~C~KrFaTeklL~~Hv~r-Hvn  262 (467)
T KOG3608|consen  233 -------------------------------------------------LNTNSFQCAQCFKRFATEKLLKSHVVR-HVN  262 (467)
T ss_pred             -------------------------------------------------hcCCchHHHHHHHHHhHHHHHHHHHHH-hhh
Confidence                                                             112369999999999999999999998 643


Q ss_pred             CCCcccccccCCCCcchhhhHhhhccCCCCCCcccccccccccCChHHHHHHHhhhccccCcchhhhhhhhhhhhhhhHH
Q psy8169         473 ISPDAIKEESGEGKPNILEVILQEGKVPNNNAIIQCRICSKTFTRKDSLRKHMRRFHIINDTNVKKEFTEGQINRNMLDV  552 (843)
Q Consensus       473 ~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~~~~~~~~~~~~~~~~~  552 (843)
                                 .                     |+|+.|+-+....+.|.+||+..|.                      
T Consensus       263 -----------~---------------------ykCplCdmtc~~~ssL~~H~r~rHs----------------------  288 (467)
T KOG3608|consen  263 -----------C---------------------YKCPLCDMTCSSASSLTTHIRYRHS----------------------  288 (467)
T ss_pred             -----------c---------------------ccccccccCCCChHHHHHHHHhhhc----------------------
Confidence                       1                     9999999999999999999998664                      


Q ss_pred             HHhhcccCCCCCcccccccccccchHHHHHHHHHhhccCCCCCCCCCCCCCCCcchhhhccCCcccccCccccCcccccC
Q psy8169         553 ILKESGHEIKSRIPCELCYKTFTRKDSLRKHMKIFHTRRNPSANSGNSGTSAPPAVKLEQNGGEKVENSTSVENSTSVEN  632 (843)
Q Consensus       553 ~~~~~~~~~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  632 (843)
                              ..+||+|..|++.|.+.+.|.+|..+ |.                         .                 
T Consensus       289 --------~dkpfKCd~Cd~~c~~esdL~kH~~~-HS-------------------------~-----------------  317 (467)
T KOG3608|consen  289 --------KDKPFKCDECDTRCVRESDLAKHVQV-HS-------------------------K-----------------  317 (467)
T ss_pred             --------cCCCccccchhhhhccHHHHHHHHHh-cc-------------------------c-----------------
Confidence                    38999999999999999999999997 55                         1                 


Q ss_pred             CCcccccCCcCCCccccCCCCCCCCCCCCCCCCcc--ccccccchhhhhhhhhccccCCCCCCccchhhccccccccccc
Q psy8169         633 STSVENSANVENTSSVDNRTSVGPVAPIDRIPCTL--CDKTFTRKDSLKKHIRIFHTQNQPQHTNVIEVALGARANAAFI  710 (843)
Q Consensus       633 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~C~~--C~~~f~~~~~L~~H~~~~H~~~~p~~~~~~~~~~~~~~~~~~~  710 (843)
                                             ++     |+|++  |.++|.+...|++|++.+|.|..|                   
T Consensus       318 -----------------------~~-----y~C~h~~C~~s~r~~~q~~~H~~evhEg~np-------------------  350 (467)
T KOG3608|consen  318 -----------------------TV-----YQCEHPDCHYSVRTYTQMRRHFLEVHEGNNP-------------------  350 (467)
T ss_pred             -----------------------cc-----eecCCCCCcHHHHHHHHHHHHHHHhccCCCC-------------------
Confidence                                   11     99999  999999999999999999988877                   


Q ss_pred             ccccccchhhhhhhHHHHhhhhhhhcCCCCC
Q psy8169         711 DRIRCELCDKSFTRKDSLKKHNRIFHGGADP  741 (843)
Q Consensus       711 ~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~  741 (843)
                      .+|.|..|++.|++-.+|.+|++..|+-.-|
T Consensus       351 ~~Y~CH~Cdr~ft~G~~L~~HL~kkH~f~~P  381 (467)
T KOG3608|consen  351 ILYACHCCDRFFTSGKSLSAHLMKKHGFRLP  381 (467)
T ss_pred             CceeeecchhhhccchhHHHHHHHhhcccCC
Confidence            2499999999999999999999999985444

>KOG2462|consensus

Probab=99.92  E-value=4.2e-26  Score=203.65  Aligned_cols=137  Identities=28%  Similarity=0.640  Sum_probs=124.0

Q ss_pred             cccccccccccCChHHHHHHHhhhccccCcchhhhhhhhhhhhhhhHHHHhhcccCCCCCcccccccccccchHHHHHHH
Q psy8169         505 IIQCRICSKTFTRKDSLRKHMRRFHIINDTNVKKEFTEGQINRNMLDVILKESGHEIKSRIPCELCYKTFTRKDSLRKHM  584 (843)
Q Consensus       505 ~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~L~~H~  584 (843)
                      .|+|+.||+.+.+..+|.+|.+. |.                           .....+.|.|.+||+.|.+...|+.|+
T Consensus       130 r~~c~eCgk~ysT~snLsrHkQ~-H~---------------------------~~~s~ka~~C~~C~K~YvSmpALkMHi  181 (279)
T KOG2462|consen  130 RYKCPECGKSYSTSSNLSRHKQT-HR---------------------------SLDSKKAFSCKYCGKVYVSMPALKMHI  181 (279)
T ss_pred             ceeccccccccccccccchhhcc-cc---------------------------cccccccccCCCCCceeeehHHHhhHh
Confidence            49999999999999999999998 65                           222267899999999999999999999


Q ss_pred             HHhhccCCCCCCCCCCCCCCCcchhhhccCCcccccCccccCcccccCCCcccccCCcCCCccccCCCCCCCCCCCCCCC
Q psy8169         585 KIFHTRRNPSANSGNSGTSAPPAVKLEQNGGEKVENSTSVENSTSVENSTSVENSANVENTSSVDNRTSVGPVAPIDRIP  664 (843)
Q Consensus       585 ~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~  664 (843)
                      ++ |+.                                                                 |      +.
T Consensus       182 rT-H~l-----------------------------------------------------------------~------c~  189 (279)
T KOG2462|consen  182 RT-HTL-----------------------------------------------------------------P------CE  189 (279)
T ss_pred             hc-cCC-----------------------------------------------------------------C------cc
Confidence            99 541                                                                 3      89


Q ss_pred             CccccccccchhhhhhhhhccccCCCCCCccchhhcccccccccccccccccchhhhhhhHHHHhhhhhhhcCCCCCCcc
Q psy8169         665 CTLCDKTFTRKDSLKKHIRIFHTQNQPQHTNVIEVALGARANAAFIDRIRCELCDKSFTRKDSLKKHNRIFHGGADPKVM  744 (843)
Q Consensus       665 C~~C~~~f~~~~~L~~H~~~~H~~~~p~~~~~~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~~  744 (843)
                      |.+||+.|....-|+-|+|+ |+|+||                     |.|++|+++|+++++|+.||++|.+ .++   
T Consensus       190 C~iCGKaFSRPWLLQGHiRT-HTGEKP---------------------F~C~hC~kAFADRSNLRAHmQTHS~-~K~---  243 (279)
T KOG2462|consen  190 CGICGKAFSRPWLLQGHIRT-HTGEKP---------------------FSCPHCGKAFADRSNLRAHMQTHSD-VKK---  243 (279)
T ss_pred             cccccccccchHHhhccccc-ccCCCC---------------------ccCCcccchhcchHHHHHHHHhhcC-Ccc---
Confidence            99999999999999999999 999999                     9999999999999999999999655 666   


Q ss_pred             hhhhhcCCcceeeeeecCCCCCCCCccccchhhchhhhhhhhhhhHHHHHhHh
Q psy8169         745 DEQMARGSADFLEVVLNEDGEGEPVSITNEILCKICNRTFTRNYNLKKHMKTV  797 (843)
Q Consensus       745 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~C~~~F~~~~~L~~H~~~~  797 (843)
                                                    |+|..|+++|..++.|.+|...-
T Consensus       244 ------------------------------~qC~~C~KsFsl~SyLnKH~ES~  266 (279)
T KOG2462|consen  244 ------------------------------HQCPRCGKSFALKSYLNKHSESA  266 (279)
T ss_pred             ------------------------------ccCcchhhHHHHHHHHHHhhhhc
Confidence                                          99999999999999999998653

>KOG3623|consensus

Probab=99.91  E-value=8.3e-24  Score=211.57  Aligned_cols=108  Identities=28%  Similarity=0.636  Sum_probs=100.9

Q ss_pred             cccCCcchhccCChhHHHHhHhhhcCCCCcccccccccccccCHHHHHHHHhhcCC--------------CcccccchhH
Q psy8169         124 LHECDLCGKNFSQRNNLKRHLEEVHRTDGMKFECYVCSKVLATSHSLKRHLLIHNG--------------PKYTCEICAK  189 (843)
Q Consensus       124 ~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~--------------~~~~C~~C~~  189 (843)
                      ...|++|+..+.....|+.|++-.|...+..|.|..|.++|.+...|.+||.+|..              ++|+|..|++
T Consensus       210 lltcpycdrgykrltslkeHikyrhekne~nfsC~lCsytFAyRtQLErhm~~hkpg~dqa~sltqsa~lRKFKCtECgK  289 (1007)
T KOG3623|consen  210 LLTCPYCDRGYKRLTSLKEHIKYRHEKNEPNFSCMLCSYTFAYRTQLERHMQLHKPGGDQAISLTQSALLRKFKCTECGK  289 (1007)
T ss_pred             hhcchhHHHHHHHHHHHHHHHHHHHhhCCCCCcchhhhhhhhhHHHHHHHHHhhcCCCcccccccchhhhccccccccch
Confidence            36799999999999999999998887788889999999999999999999999952              3599999999


Q ss_pred             hhcCHHHHHHHHhhccCccccCccccCcccccccchhhHHHhhhh
Q psy8169         190 EFTRVYELNIHKKLHEDESVANQLKCEFCGKVFLKKSNLKAHIEN  234 (843)
Q Consensus       190 ~f~~~~~L~~H~~~h~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~  234 (843)
                      .|..+..|+.|+++|.|+   ++|.|+.|+++|.....+..||..
T Consensus       290 AFKfKHHLKEHlRIHSGE---KPfeCpnCkKRFSHSGSySSHmSS  331 (1007)
T KOG3623|consen  290 AFKFKHHLKEHLRIHSGE---KPFECPNCKKRFSHSGSYSSHMSS  331 (1007)
T ss_pred             hhhhHHHHHhhheeecCC---CCcCCcccccccccCCcccccccc
Confidence            999999999999999999   999999999999999999999843

>KOG2462|consensus

Probab=99.90  E-value=2.8e-24  Score=192.02  Aligned_cols=139  Identities=30%  Similarity=0.673  Sum_probs=123.7

Q ss_pred             CCCceecccccccccChHHHHHHHHhhccCCCCcccccccCCCCcchhhhHhhhccCCCCCCcccccccccccCChHHHH
Q psy8169         443 ANKIIQCHICLKTFAKKDSLKKHMKVFHTYISPDAIKEESGEGKPNILEVILQEGKVPNNNAIIQCRICSKTFTRKDSLR  522 (843)
Q Consensus       443 ~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~L~  522 (843)
                      ....|+|+.||+.+.+..+|.+|.+. |....                           ..+.+.|++|++.|.+..+|.
T Consensus       127 ~~~r~~c~eCgk~ysT~snLsrHkQ~-H~~~~---------------------------s~ka~~C~~C~K~YvSmpALk  178 (279)
T KOG2462|consen  127 KHPRYKCPECGKSYSTSSNLSRHKQT-HRSLD---------------------------SKKAFSCKYCGKVYVSMPALK  178 (279)
T ss_pred             cCCceeccccccccccccccchhhcc-ccccc---------------------------ccccccCCCCCceeeehHHHh
Confidence            44579999999999999999999998 54321                           112289999999999999999


Q ss_pred             HHHhhhccccCcchhhhhhhhhhhhhhhHHHHhhcccCCCCCcccccccccccchHHHHHHHHHhhccCCCCCCCCCCCC
Q psy8169         523 KHMRRFHIINDTNVKKEFTEGQINRNMLDVILKESGHEIKSRIPCELCYKTFTRKDSLRKHMKIFHTRRNPSANSGNSGT  602 (843)
Q Consensus       523 ~H~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~~~~~~~~  602 (843)
                      +|+|+ |.                                -++.|.+||+.|.+...|+-|+++ |+             
T Consensus       179 MHirT-H~--------------------------------l~c~C~iCGKaFSRPWLLQGHiRT-HT-------------  211 (279)
T KOG2462|consen  179 MHIRT-HT--------------------------------LPCECGICGKAFSRPWLLQGHIRT-HT-------------  211 (279)
T ss_pred             hHhhc-cC--------------------------------CCcccccccccccchHHhhccccc-cc-------------
Confidence            99998 53                                489999999999999999999999 77             


Q ss_pred             CCCcchhhhccCCcccccCccccCcccccCCCcccccCCcCCCccccCCCCCCCCCCCCCCCCccccccccchhhhhhhh
Q psy8169         603 SAPPAVKLEQNGGEKVENSTSVENSTSVENSTSVENSANVENTSSVDNRTSVGPVAPIDRIPCTLCDKTFTRKDSLKKHI  682 (843)
Q Consensus       603 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~C~~C~~~f~~~~~L~~H~  682 (843)
                                  |++                                      |      |.|++|++.|.++++|+.||
T Consensus       212 ------------GEK--------------------------------------P------F~C~hC~kAFADRSNLRAHm  235 (279)
T KOG2462|consen  212 ------------GEK--------------------------------------P------FSCPHCGKAFADRSNLRAHM  235 (279)
T ss_pred             ------------CCC--------------------------------------C------ccCCcccchhcchHHHHHHH
Confidence                        555                                      5      99999999999999999999


Q ss_pred             hccccCCCCCCccchhhcccccccccccccccccchhhhhhhHHHHhhhhhh
Q psy8169         683 RIFHTQNQPQHTNVIEVALGARANAAFIDRIRCELCDKSFTRKDSLKKHNRI  734 (843)
Q Consensus       683 ~~~H~~~~p~~~~~~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~L~~H~~~  734 (843)
                      ++ |.+.++                     |+|..|+|+|+.++.|.+|...
T Consensus       236 QT-HS~~K~---------------------~qC~~C~KsFsl~SyLnKH~ES  265 (279)
T KOG2462|consen  236 QT-HSDVKK---------------------HQCPRCGKSFALKSYLNKHSES  265 (279)
T ss_pred             Hh-hcCCcc---------------------ccCcchhhHHHHHHHHHHhhhh
Confidence            99 999988                     9999999999999999999754

>KOG3623|consensus

Probab=99.83  E-value=5.3e-21  Score=191.75  Aligned_cols=108  Identities=29%  Similarity=0.618  Sum_probs=95.9

Q ss_pred             ccccccchhhcCCHHHHHHHHhhccCCCCCcccccccccccCCHHHHHHhHHhhccC-------------CCceeCCCCC
Q psy8169          17 NHMCELCYKVFESRENLMRHLKIHDDKESKRFKCEQCDKRFSSNAELNKHSSAIHQR-------------LKLHECDLCG   83 (843)
Q Consensus        17 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~-------------~~~~~C~~C~   83 (843)
                      ...|++|++.+.....|+.|++.-+.+.+.-|.|..|.++|.+...|.+|+ ..|..             .+.|+|.+|+
T Consensus       210 lltcpycdrgykrltslkeHikyrhekne~nfsC~lCsytFAyRtQLErhm-~~hkpg~dqa~sltqsa~lRKFKCtECg  288 (1007)
T KOG3623|consen  210 LLTCPYCDRGYKRLTSLKEHIKYRHEKNEPNFSCMLCSYTFAYRTQLERHM-QLHKPGGDQAISLTQSALLRKFKCTECG  288 (1007)
T ss_pred             hhcchhHHHHHHHHHHHHHHHHHHHhhCCCCCcchhhhhhhhhHHHHHHHH-HhhcCCCcccccccchhhhccccccccc
Confidence            468999999999999999999865555567899999999999999999998 55633             3579999999


Q ss_pred             CcccchhhHHhhhcCCCCCCCCCChHHHhhhhhhhhcCCCcccCCcchhccCChhHHHHhHh
Q psy8169          84 KNFSQRNNLKRQANGSNVNNRFSSNAELNKHSSAIHQRLKLHECDLCGKNFSQRNNLKRHLE  145 (843)
Q Consensus        84 ~~f~~~~~l~~H~~~~~~~~~~~~~~~l~~h~~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~  145 (843)
                      ++|..+..|+.|+                    +||.|+|||.|+.|++.|+....+..||.
T Consensus       289 KAFKfKHHLKEHl--------------------RIHSGEKPfeCpnCkKRFSHSGSySSHmS  330 (1007)
T KOG3623|consen  289 KAFKFKHHLKEHL--------------------RIHSGEKPFECPNCKKRFSHSGSYSSHMS  330 (1007)
T ss_pred             hhhhhHHHHHhhh--------------------eeecCCCCcCCcccccccccCCccccccc
Confidence            9999999997666                    89999999999999999999999999985

>KOG3576|consensus

Probab=99.63  E-value=1e-16  Score=134.88  Aligned_cols=82  Identities=39%  Similarity=0.799  Sum_probs=62.6

Q ss_pred             CcccccccccccCCHHHHHHhHHhhccCCCceeCCCCCCcccchhhHHhhhcCCCCCCCCCChHHHhhhhhhhhcCCCcc
Q psy8169          46 KRFKCEQCDKRFSSNAELNKHSSAIHQRLKLHECDLCGKNFSQRNNLKRQANGSNVNNRFSSNAELNKHSSAIHQRLKLH  125 (843)
Q Consensus        46 ~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~~l~~h~~~~h~~~~~~  125 (843)
                      -.|.|.+|++.|.-+..|.+|+ ..|...+.|.|..||+.|....+|++|+                    +.|++.+||
T Consensus       116 d~ftCrvCgK~F~lQRmlnrh~-kch~~vkr~lct~cgkgfndtfdlkrh~--------------------rthtgvrpy  174 (267)
T KOG3576|consen  116 DSFTCRVCGKKFGLQRMLNRHL-KCHSDVKRHLCTFCGKGFNDTFDLKRHT--------------------RTHTGVRPY  174 (267)
T ss_pred             CeeeeehhhhhhhHHHHHHHHh-hhccHHHHHHHhhccCcccchhhhhhhh--------------------ccccCcccc
Confidence            4577777777777777777777 6777777777777777777777777666                    667777777


Q ss_pred             cCCcchhccCChhHHHHhHhhhc
Q psy8169         126 ECDLCGKNFSQRNNLKRHLEEVH  148 (843)
Q Consensus       126 ~C~~C~~~f~~~~~l~~H~~~~h  148 (843)
                      +|..|++.|...-.|..|++.+|
T Consensus       175 kc~~c~kaftqrcsleshl~kvh  197 (267)
T KOG3576|consen  175 KCSLCEKAFTQRCSLESHLKKVH  197 (267)
T ss_pred             chhhhhHHHHhhccHHHHHHHHc
Confidence            77777777777777777777766

>KOG3576|consensus

Probab=99.60  E-value=3.6e-16  Score=131.68  Aligned_cols=127  Identities=27%  Similarity=0.473  Sum_probs=96.6

Q ss_pred             CCcccccccccccccCHHHHHHHHhhcCCCc-ccccchhHhhcCHHHHHHHHhhccCccccCccccCcccccccchhhHH
Q psy8169         151 DGMKFECYVCSKVLATSHSLKRHLLIHNGPK-YTCEICAKEFTRVYELNIHKKLHEDESVANQLKCEFCGKVFLKKSNLK  229 (843)
Q Consensus       151 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~-~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~~C~~C~~~f~~~~~l~  229 (843)
                      +...|.|.+|++.|.-...|.+||+.|...+ |-|..||+.|...-.|.+|+++|++.   +||+|..|++.|..+-.|.
T Consensus       114 d~d~ftCrvCgK~F~lQRmlnrh~kch~~vkr~lct~cgkgfndtfdlkrh~rthtgv---rpykc~~c~kaftqrcsle  190 (267)
T KOG3576|consen  114 DQDSFTCRVCGKKFGLQRMLNRHLKCHSDVKRHLCTFCGKGFNDTFDLKRHTRTHTGV---RPYKCSLCEKAFTQRCSLE  190 (267)
T ss_pred             CCCeeeeehhhhhhhHHHHHHHHhhhccHHHHHHHhhccCcccchhhhhhhhccccCc---cccchhhhhHHHHhhccHH
Confidence            4456888888888888888888888888755 88889999998888899999999887   8899999999999999999


Q ss_pred             HhhhhcCCCccCCccccCCcccccCCHHHHHHHHhhhcCCCCCcceeecCcChhccCChHHHHHHHHHhcCCCce
Q psy8169         230 AHIENNHLDYSCLECKAVGEEISFDTKKNLLLHLKTKHKNVISNVYLTCLICFKTFLTEVDLGKHMKMHMDDNQI  304 (843)
Q Consensus       230 ~H~~~~H~~~~C~~C~~~~~~~~~~~~~~l~~H~~~~~~~~~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~  304 (843)
                      .|++++|..             .    ....  .+..     ....|.|..||.+-.....+..|++.|+..-++
T Consensus       191 shl~kvhgv-------------~----~~ya--yker-----r~kl~vcedcg~t~~~~e~~~~h~~~~hp~Spa  241 (267)
T KOG3576|consen  191 SHLKKVHGV-------------Q----HQYA--YKER-----RAKLYVCEDCGYTSERPEVYYLHLKLHHPFSPA  241 (267)
T ss_pred             HHHHHHcCc-------------h----HHHH--HHHh-----hhheeeecccCCCCCChhHHHHHHHhcCCCCHH
Confidence            998888721             0    0000  0110     111588888888888888888888887766554

>KOG1146|consensus

Probab=99.19  E-value=4.8e-11  Score=130.77  Aligned_cols=123  Identities=15%  Similarity=0.208  Sum_probs=71.2

Q ss_pred             CCccccccccchhhhhhhhhccccCCC----CCCccchhhccccccc---ccccccccccchhhhhhhHHHHhhhhhhhc
Q psy8169         664 PCTLCDKTFTRKDSLKKHIRIFHTQNQ----PQHTNVIEVALGARAN---AAFIDRIRCELCDKSFTRKDSLKKHNRIFH  736 (843)
Q Consensus       664 ~C~~C~~~f~~~~~L~~H~~~~H~~~~----p~~~~~~~~~~~~~~~---~~~~~~~~C~~C~~~f~~~~~L~~H~~~~H  736 (843)
                      .|..|...|.....+..|-+- -..+.    -+.|..++..+.....   .....+|.|..|...|.....|..|.+..-
T Consensus      1230 ~~~~~e~~f~~~~~~~~~a~~-~~~~~~~sGe~~c~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~k~~ 1308 (1406)
T KOG1146|consen 1230 LPNALEQPFPQEPEPTATAPP-KPPELPASGEGECGAVDELLTPSFGISTLDVTHRYLCRQCKMAFDGEAPLTAHQRKFC 1308 (1406)
T ss_pred             cHHhhhcCccCcccccccCCC-CCCcCcCCCcchhhhccccccCccceeecccchhHHHHHHHhhhcchhHHHHHHHHHH
Confidence            366666666666666555432 11111    1345555554443333   334467999999999999999999984422


Q ss_pred             CCCCCCcchhhhhcCCcceeeeeecCCCCCCCCccccchhhchhhhhhhhhhhHHHHHhHhhccCCCCc
Q psy8169         737 GGADPKVMDEQMARGSADFLEVVLNEDGEGEPVSITNEILCKICNRTFTRNYNLKKHMKTVHKIDDNEP  805 (843)
Q Consensus       737 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~C~~~F~~~~~L~~H~~~~H~~~~~~~  805 (843)
                      ---++  .    .....-.+.           ......| |.+|...|.....|..|||..+......+
T Consensus      1309 ~~~~~--~----~~~~~~~l~-----------~~d~~~~-c~~c~~~~~~~~alqihm~~~~~~~kt~~ 1359 (1406)
T KOG1146|consen 1309 FAGRG--S----GGSMPPPLR-----------VPDCTYH-CLACEVLLSGREALQIHMRSSAHRRKTAP 1359 (1406)
T ss_pred             hccCc--c----ccCCCCccc-----------Ccccccc-chHHHhhcchhHHHHHHHHHhhhcccCCC
Confidence            10000  0    000000000           0111225 99999999999999999999987544444

>PLN03086 PRLI-interacting factor K; Provisional

Probab=99.09  E-value=1.1e-10  Score=120.68  Aligned_cols=78  Identities=22%  Similarity=0.510  Sum_probs=66.1

Q ss_pred             CCCccccccccchhhhhhhhhccccCCCCCCccchhhcccccccccccccccccchhhhhh----------hHHHHhhhh
Q psy8169         663 IPCTLCDKTFTRKDSLKKHIRIFHTQNQPQHTNVIEVALGARANAAFIDRIRCELCDKSFT----------RKDSLKKHN  732 (843)
Q Consensus       663 ~~C~~C~~~f~~~~~L~~H~~~~H~~~~p~~~~~~~~~~~~~~~~~~~~~~~C~~C~~~f~----------~~~~L~~H~  732 (843)
                      +.|+ ||+.+ .+..|..|+.. |...+|                     +.|.+|++.|.          ..+.|..|.
T Consensus       479 v~Cp-Cg~~~-~R~~L~~H~~t-hCp~Kp---------------------i~C~fC~~~v~~g~~~~d~~d~~s~Lt~HE  534 (567)
T PLN03086        479 LQCP-CGVVL-EKEQMVQHQAS-TCPLRL---------------------ITCRFCGDMVQAGGSAMDVRDRLRGMSEHE  534 (567)
T ss_pred             ccCC-CCCCc-chhHHHhhhhc-cCCCCc---------------------eeCCCCCCccccCccccchhhhhhhHHHHH
Confidence            8999 99755 67999999988 888888                     99999999995          245899998


Q ss_pred             hhhcCCCCCCcchhhhhcCCcceeeeeecCCCCCCCCccccchhhchhhhhhhhhhhHHHHHhHhhcc
Q psy8169         733 RIFHGGADPKVMDEQMARGSADFLEVVLNEDGEGEPVSITNEILCKICNRTFTRNYNLKKHMKTVHKI  800 (843)
Q Consensus       733 ~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~C~~~F~~~~~L~~H~~~~H~~  800 (843)
                      .. .+ .++                                 +.|..||+.|.. ..|..|+..+|+.
T Consensus       535 ~~-CG-~rt---------------------------------~~C~~Cgk~Vrl-rdm~~H~~~~h~~  566 (567)
T PLN03086        535 SI-CG-SRT---------------------------------APCDSCGRSVML-KEMDIHQIAVHQK  566 (567)
T ss_pred             Hh-cC-Ccc---------------------------------eEccccCCeeee-hhHHHHHHHhhcC
Confidence            87 44 666                                 889999999876 6799999999974

>KOG1146|consensus

Probab=99.05  E-value=1.8e-10  Score=126.37  Aligned_cols=86  Identities=19%  Similarity=0.440  Sum_probs=70.2

Q ss_pred             cCCCCccccccchhhcCCHHHHHHHHhhccCC-----------------------CCCcccccccccccCCHHHHHHhHH
Q psy8169          12 HEYVENHMCELCYKVFESRENLMRHLKIHDDK-----------------------ESKRFKCEQCDKRFSSNAELNKHSS   68 (843)
Q Consensus        12 h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~-----------------------~~~~~~C~~C~~~f~~~~~l~~H~~   68 (843)
                      +...+.|+|+.|++.|+....|..||+.-+.+                       ..++|.|..|+.+++++.+|.+|++
T Consensus       460 ~S~~kt~~cpkc~~~yk~a~~L~vhmRskhp~~~~~~c~~gq~~~~~arg~~~~~~~~p~~C~~C~~stttng~Lsihlq  539 (1406)
T KOG1146|consen  460 HSFFKTLKCPKCNWHYKLAQTLGVHMRSKHPESQSAYCKAGQNHPRLARGEVYRCPGKPYPCRACNYSTTTNGNLSIHLQ  539 (1406)
T ss_pred             ecccccccCCccchhhhhHHHhhhcccccccccchhHhHhccccccccccccccCCCCcccceeeeeeeecchHHHHHHH
Confidence            45568899999999999999999999872211                       2378999999999999999999986


Q ss_pred             hh-c-----------------------------------------cCCCceeCCCCCCcccchhhHHhhhc
Q psy8169          69 AI-H-----------------------------------------QRLKLHECDLCGKNFSQRNNLKRQAN   97 (843)
Q Consensus        69 ~~-h-----------------------------------------~~~~~~~C~~C~~~f~~~~~l~~H~~   97 (843)
                      .. |                                         .....+.|..|++...-..+|+.||.
T Consensus       540 S~~h~~~lee~~~~~g~~v~~~~~~v~s~~P~~ag~~~~ags~~pktkP~~~C~vc~yetniarnlrihmt  610 (1406)
T KOG1146|consen  540 SDLHRNELEEAEENAGEQVRLLPASVTSAVPEEAGLGPSAGSSGPKTKPSWRCEVCSYETNIARNLRIHMT  610 (1406)
T ss_pred             HHhhHHHHHHHHhccccchhhhhhhhcccCcccccCCCCCCCCCCCCCCCcchhhhcchhhhhhccccccc
Confidence            43 2                                         11235899999999999999999986

>PLN03086 PRLI-interacting factor K; Provisional

Probab=99.04  E-value=5.5e-10  Score=115.53  Aligned_cols=144  Identities=20%  Similarity=0.500  Sum_probs=103.2

Q ss_pred             ccccccccccCCHHHHHHhHHhhccCCCceeCCC--CCCcccchhhHHhhhcCCCCCCCCCChHHHhhhhhhhhcCCCcc
Q psy8169          48 FKCEQCDKRFSSNAELNKHSSAIHQRLKLHECDL--CGKNFSQRNNLKRQANGSNVNNRFSSNAELNKHSSAIHQRLKLH  125 (843)
Q Consensus        48 ~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~~~~~~~~~~~~~l~~h~~~~h~~~~~~  125 (843)
                      -.|+.|..... ...|..|. ... .-..-.|+.  |+..|.. ..+                             .+.+
T Consensus       408 V~C~NC~~~i~-l~~l~lHe-~~C-~r~~V~Cp~~~Cg~v~~r-~el-----------------------------~~H~  454 (567)
T PLN03086        408 VECRNCKHYIP-SRSIALHE-AYC-SRHNVVCPHDGCGIVLRV-EEA-----------------------------KNHV  454 (567)
T ss_pred             EECCCCCCccc-hhHHHHHH-hhC-CCcceeCCcccccceeec-ccc-----------------------------ccCc
Confidence            46888876654 45667886 322 234456874  8888732 222                             2335


Q ss_pred             cCCcchhccCChhHHHHhHhhhcCCCCcccccccccccccCHHHHHHHHhhcCCCc-ccccchhHhhc----------CH
Q psy8169         126 ECDLCGKNFSQRNNLKRHLEEVHRTDGMKFECYVCSKVLATSHSLKRHLLIHNGPK-YTCEICAKEFT----------RV  194 (843)
Q Consensus       126 ~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~-~~C~~C~~~f~----------~~  194 (843)
                      .|+.|++.|. ...|..|++.+|    .+|.|+ |++.+ .+..|..|+.+|.+.+ +.|..|++.|.          ..
T Consensus       455 ~C~~Cgk~f~-~s~LekH~~~~H----kpv~Cp-Cg~~~-~R~~L~~H~~thCp~Kpi~C~fC~~~v~~g~~~~d~~d~~  527 (567)
T PLN03086        455 HCEKCGQAFQ-QGEMEKHMKVFH----EPLQCP-CGVVL-EKEQMVQHQASTCPLRLITCRFCGDMVQAGGSAMDVRDRL  527 (567)
T ss_pred             cCCCCCCccc-hHHHHHHHHhcC----CCccCC-CCCCc-chhHHHhhhhccCCCCceeCCCCCCccccCccccchhhhh
Confidence            7999999885 678899988543    678999 99755 6789999998887754 99999998884          24


Q ss_pred             HHHHHHHhhccCccccCccccCcccccccchhhHHHhhhhcC
Q psy8169         195 YELNIHKKLHEDESVANQLKCEFCGKVFLKKSNLKAHIENNH  236 (843)
Q Consensus       195 ~~L~~H~~~h~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~H  236 (843)
                      ..|..|...+ +.   +++.|..|++.+..+ .|..|+...|
T Consensus       528 s~Lt~HE~~C-G~---rt~~C~~Cgk~Vrlr-dm~~H~~~~h  564 (567)
T PLN03086        528 RGMSEHESIC-GS---RTAPCDSCGRSVMLK-EMDIHQIAVH  564 (567)
T ss_pred             hhHHHHHHhc-CC---cceEccccCCeeeeh-hHHHHHHHhh
Confidence            5788888886 44   789999999887665 5788876665

>KOG3993|consensus

Probab=99.00  E-value=3.3e-10  Score=107.98  Aligned_cols=112  Identities=21%  Similarity=0.375  Sum_probs=75.2

Q ss_pred             ceecccccccccChHHHHHHH--HhhccCCCCcccccccCCCCcchhhhHhhhccCCCCCCcccccccccccCChHHHHH
Q psy8169         446 IIQCHICLKTFAKKDSLKKHM--KVFHTYISPDAIKEESGEGKPNILEVILQEGKVPNNNAIIQCRICSKTFTRKDSLRK  523 (843)
Q Consensus       446 ~~~C~~C~~~f~~~~~L~~H~--~~~H~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~L~~  523 (843)
                      -|.|.+|...|.+.-.|.+|.  +++|..                                 |+|+.|+++|....+|..
T Consensus       267 dyiCqLCK~kYeD~F~LAQHrC~RIV~vE---------------------------------YrCPEC~KVFsCPANLAS  313 (500)
T KOG3993|consen  267 DYICQLCKEKYEDAFALAQHRCPRIVHVE---------------------------------YRCPECDKVFSCPANLAS  313 (500)
T ss_pred             HHHHHHHHHhhhhHHHHhhccCCeeEEee---------------------------------ecCCcccccccCchhhhh
Confidence            499999999999999999995  444432                                 999999999999999999


Q ss_pred             HHhhhccccCcchhhhhhhhh---hhhhhhHHHHhhcccCCCCCcccccccccccchHHHHHHHHHhhccC
Q psy8169         524 HMRRFHIINDTNVKKEFTEGQ---INRNMLDVILKESGHEIKSRIPCELCYKTFTRKDSLRKHMKIFHTRR  591 (843)
Q Consensus       524 H~~~~H~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~  591 (843)
                      |.|- |.-.............   ..........+........-|.|..|+++|.+...|++|+.+||...
T Consensus       314 HRRW-HKPR~eaa~a~~~P~k~~~~~rae~~ea~rsg~dss~gi~~C~~C~KkFrRqAYLrKHqlthq~~~  383 (500)
T KOG3993|consen  314 HRRW-HKPRPEAAKAGSPPPKQAVETRAEVQEAERSGDDSSSGIFSCHTCGKKFRRQAYLRKHQLTHQRAP  383 (500)
T ss_pred             hhcc-cCCchhhhhcCCCChhhhhhhhhhhhhccccCCcccCceeecHHhhhhhHHHHHHHHhHHhhhccc
Confidence            9887 7533322210000000   00000000000111122458999999999999999999999976543

>PHA00733 hypothetical protein

Probab=98.94  E-value=2.8e-10  Score=94.70  Aligned_cols=84  Identities=21%  Similarity=0.369  Sum_probs=69.9

Q ss_pred             CCCCCccccccccchhhhhhh--hhc--cccCCCCCCccchhhcccccccccccccccccchhhhhhhHHHHhhhhhhhc
Q psy8169         661 DRIPCTLCDKTFTRKDSLKKH--IRI--FHTQNQPQHTNVIEVALGARANAAFIDRIRCELCDKSFTRKDSLKKHNRIFH  736 (843)
Q Consensus       661 ~~~~C~~C~~~f~~~~~L~~H--~~~--~H~~~~p~~~~~~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~L~~H~~~~H  736 (843)
                      +++.|.+|+..|.+...|..|  ++.  .+.+.+|                     |.|+.|++.|.+...|..|++.+ 
T Consensus        39 ~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~kP---------------------y~C~~Cgk~Fss~s~L~~H~r~h-   96 (128)
T PHA00733         39 KRLIRAVVKTLIYNPQLLDESSYLYKLLTSKAVSP---------------------YVCPLCLMPFSSSVSLKQHIRYT-   96 (128)
T ss_pred             hhHHHHHHhhhccChhhhcchHHHHhhcccCCCCC---------------------ccCCCCCCcCCCHHHHHHHHhcC-
Confidence            448999999999988887777  222  2334566                     99999999999999999999863 


Q ss_pred             CCCCCCcchhhhhcCCcceeeeeecCCCCCCCCccccchhhchhhhhhhhhhhHHHHHhHhhccC
Q psy8169         737 GGADPKVMDEQMARGSADFLEVVLNEDGEGEPVSITNEILCKICNRTFTRNYNLKKHMKTVHKID  801 (843)
Q Consensus       737 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~C~~~F~~~~~L~~H~~~~H~~~  801 (843)
                        ..+                                 |.|.+|++.|.....|..|++..|++.
T Consensus        97 --~~~---------------------------------~~C~~CgK~F~~~~sL~~H~~~~h~~~  126 (128)
T PHA00733         97 --EHS---------------------------------KVCPVCGKEFRNTDSTLDHVCKKHNIC  126 (128)
T ss_pred             --CcC---------------------------------ccCCCCCCccCCHHHHHHHHHHhcCcc
Confidence              223                                 889999999999999999999999975

>PHA00733 hypothetical protein

Probab=98.81  E-value=4.8e-09  Score=87.38  Aligned_cols=52  Identities=27%  Similarity=0.604  Sum_probs=28.5

Q ss_pred             CcccccchhHhhcCHHHHHHHHhhccCccccCccccCcccccccchhhHHHhhhhcC
Q psy8169         180 PKYTCEICAKEFTRVYELNIHKKLHEDESVANQLKCEFCGKVFLKKSNLKAHIENNH  236 (843)
Q Consensus       180 ~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~H  236 (843)
                      .+|.|+.|++.|.+...|..|++.|.     .+|.|+.|++.|.....|..|+...|
T Consensus        72 kPy~C~~Cgk~Fss~s~L~~H~r~h~-----~~~~C~~CgK~F~~~~sL~~H~~~~h  123 (128)
T PHA00733         72 SPYVCPLCLMPFSSSVSLKQHIRYTE-----HSKVCPVCGKEFRNTDSTLDHVCKKH  123 (128)
T ss_pred             CCccCCCCCCcCCCHHHHHHHHhcCC-----cCccCCCCCCccCCHHHHHHHHHHhc
Confidence            34555555555555555555555441     23555666666665555555555554

>PHA02768 hypothetical protein; Provisional

Probab=98.75  E-value=3.2e-09  Score=70.50  Aligned_cols=43  Identities=21%  Similarity=0.557  Sum_probs=29.3

Q ss_pred             ccccccchhhcCCHHHHHHHHhhccCCCCCcccccccccccCCHHHH
Q psy8169          17 NHMCELCYKVFESRENLMRHLKIHDDKESKRFKCEQCDKRFSSNAEL   63 (843)
Q Consensus        17 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~C~~C~~~f~~~~~l   63 (843)
                      .|.|++||+.|....+|..||++|+    ++|+|..|++.|...+.|
T Consensus         5 ~y~C~~CGK~Fs~~~~L~~H~r~H~----k~~kc~~C~k~f~~~s~l   47 (55)
T PHA02768          5 GYECPICGEIYIKRKSMITHLRKHN----TNLKLSNCKRISLRTGEY   47 (55)
T ss_pred             ccCcchhCCeeccHHHHHHHHHhcC----CcccCCcccceeccccee
Confidence            4677777777777777777777775    467777777776655544

>KOG3993|consensus

Probab=98.64  E-value=3e-09  Score=101.60  Aligned_cols=112  Identities=19%  Similarity=0.249  Sum_probs=67.9

Q ss_pred             CCcccCCcchhccCChhHHHHhHhhhcCCCCc---------------ccccccccccccCHHHHHHHHhhcCC--Ccccc
Q psy8169         122 LKLHECDLCGKNFSQRNNLKRHLEEVHRTDGM---------------KFECYVCSKVLATSHSLKRHLLIHNG--PKYTC  184 (843)
Q Consensus       122 ~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~---------------~~~C~~C~~~f~~~~~l~~H~~~h~~--~~~~C  184 (843)
                      ...|.|.+|++.|.....|+.|+..+|.....               .+.|..|.-.+.....--.+...+.+  ....|
T Consensus       354 ~gi~~C~~C~KkFrRqAYLrKHqlthq~~~~~k~~a~~f~~s~~~~l~~~~~~~a~h~~a~~~~g~~vl~~a~sael~~p  433 (500)
T KOG3993|consen  354 SGIFSCHTCGKKFRRQAYLRKHQLTHQRAPLAKEKAPKFLLSRVIPLMHFNQAVATHSSASDSHGDEVLYVAGSAELELP  433 (500)
T ss_pred             CceeecHHhhhhhHHHHHHHHhHHhhhccccchhcccCcchhhcccccccccccccccccccccccceeeeeccccccCC
Confidence            34799999999999999999997755532211               13344444444333222222222222  12567


Q ss_pred             cchhHhhcCHHHHHHHHhhccCccccCccccCcccccccchhhHHHhhhhcC
Q psy8169         185 EICAKEFTRVYELNIHKKLHEDESVANQLKCEFCGKVFLKKSNLKAHIENNH  236 (843)
Q Consensus       185 ~~C~~~f~~~~~L~~H~~~h~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~H  236 (843)
                      ++|+--+.+...-.-+.+.-...   ..|.|.+|.-.|.+...|.+|+...|
T Consensus       434 p~~~~ppsss~~sgg~~rlg~~~---q~f~~ky~~atfyss~~ltrhin~~H  482 (500)
T KOG3993|consen  434 PYDGSPPSSSGSSGGYGRLGIAE---QGFTCKYCPATFYSSPGLTRHINKCH  482 (500)
T ss_pred             CCCCCCcccCCCCCccccccchh---hccccccchHhhhcCcchHhHhhhcC
Confidence            77776665554433343333333   56888899999988888888886666

>PHA02768 hypothetical protein; Provisional

Probab=98.62  E-value=1.7e-08  Score=67.16  Aligned_cols=44  Identities=16%  Similarity=0.347  Sum_probs=40.3

Q ss_pred             eeecCcChhccCChHHHHHHHHHhcCCCceeccccchhcCChhhHH
Q psy8169         275 YLTCLICFKTFLTEVDLGKHMKMHMDDNQIQCRFCNKYFSRNYNLK  320 (843)
Q Consensus       275 ~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~~C~~~f~~~~~L~  320 (843)
                      .|.|+.||+.|.....|..|+++|.  ++|+|..|++.|...+.|.
T Consensus         5 ~y~C~~CGK~Fs~~~~L~~H~r~H~--k~~kc~~C~k~f~~~s~l~   48 (55)
T PHA02768          5 GYECPICGEIYIKRKSMITHLRKHN--TNLKLSNCKRISLRTGEYI   48 (55)
T ss_pred             ccCcchhCCeeccHHHHHHHHHhcC--CcccCCcccceecccceeE
Confidence            5899999999999999999999999  6999999999999877664

>PF13465 zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A 1TF6_A 1TF3_A 2ELT_A 2EOS_A 2EN2_A 2DMD_A 2WBS_A 2WBU_A 2EM5_A

Probab=98.40  E-value=2e-07  Score=52.77  Aligned_cols=26  Identities=35%  Similarity=0.875  Sum_probs=23.8

Q ss_pred             HHHHHHHHhcCCCceeccccchhcCC
Q psy8169         290 DLGKHMKMHMDDNQIQCRFCNKYFSR  315 (843)
Q Consensus       290 ~L~~H~~~H~~~~~~~C~~C~~~f~~  315 (843)
                      +|..|+++|++++||.|+.|+++|.+
T Consensus         1 ~l~~H~~~H~~~k~~~C~~C~k~F~~   26 (26)
T PF13465_consen    1 NLRRHMRTHTGEKPYKCPYCGKSFSN   26 (26)
T ss_dssp             HHHHHHHHHSSSSSEEESSSSEEESS
T ss_pred             CHHHHhhhcCCCCCCCCCCCcCeeCc
Confidence            48899999999999999999999964

...

>PF13465 zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A 1TF6_A 1TF3_A 2ELT_A 2EOS_A 2EN2_A 2DMD_A 2WBS_A 2WBU_A 2EM5_A

Probab=98.37  E-value=1.8e-07  Score=52.98  Aligned_cols=24  Identities=46%  Similarity=0.942  Sum_probs=13.2

Q ss_pred             HHHHHhhccCCCCCcccccccccccC
Q psy8169          33 LMRHLKIHDDKESKRFKCEQCDKRFS   58 (843)
Q Consensus        33 l~~H~~~h~~~~~~~~~C~~C~~~f~   58 (843)
                      |.+||++|++  ++||.|+.|+++|.
T Consensus         2 l~~H~~~H~~--~k~~~C~~C~k~F~   25 (26)
T PF13465_consen    2 LRRHMRTHTG--EKPYKCPYCGKSFS   25 (26)
T ss_dssp             HHHHHHHHSS--SSSEEESSSSEEES
T ss_pred             HHHHhhhcCC--CCCCCCCCCcCeeC
Confidence            5555555555  35555555555554

...

>PF05605 zf-Di19: Drought induced 19 protein (Di19), zinc-binding; InterPro: IPR008598 This entry consists of several drought induced 19 (Di19) like and RING finger 114 proteins

Probab=98.29  E-value=9.4e-07  Score=61.16  Aligned_cols=53  Identities=30%  Similarity=0.560  Sum_probs=42.8

Q ss_pred             cccCCcchhccCChhHHHHhHhhhcCCCCcccccccccccccCHHHHHHHHhhcCC
Q psy8169         124 LHECDLCGKNFSQRNNLKRHLEEVHRTDGMKFECYVCSKVLATSHSLKRHLLIHNG  179 (843)
Q Consensus       124 ~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~  179 (843)
                      .|.|++|++ ..+...|..|+...|..+.+.+.|++|...+.  .+|..||..+++
T Consensus         2 ~f~CP~C~~-~~~~~~L~~H~~~~H~~~~~~v~CPiC~~~~~--~~l~~Hl~~~H~   54 (54)
T PF05605_consen    2 SFTCPYCGK-GFSESSLVEHCEDEHRSESKNVVCPICSSRVT--DNLIRHLNSQHR   54 (54)
T ss_pred             CcCCCCCCC-ccCHHHHHHHHHhHCcCCCCCccCCCchhhhh--hHHHHHHHHhcC
Confidence            488999999 56678899999888876677899999998654  488889887653

Di19 has been found to be strongly expressed in both the roots and leaves of Arabidopsis thaliana during progressive drought [], whilst RING finger proteins are thought to play a role in spermatogenesis. The precise function is unknown.

>PF05605 zf-Di19: Drought induced 19 protein (Di19), zinc-binding; InterPro: IPR008598 This entry consists of several drought induced 19 (Di19) like and RING finger 114 proteins

Probab=98.28  E-value=7.4e-07  Score=61.68  Aligned_cols=52  Identities=27%  Similarity=0.483  Sum_probs=43.9

Q ss_pred             CCCccccccccchhhhhhhhhccccCCCCCCccchhhcccccccccccccccccchhhhhhhHHHHhhhhhhhcC
Q psy8169         663 IPCTLCDKTFTRKDSLKKHIRIFHTQNQPQHTNVIEVALGARANAAFIDRIRCELCDKSFTRKDSLKKHNRIFHG  737 (843)
Q Consensus       663 ~~C~~C~~~f~~~~~L~~H~~~~H~~~~p~~~~~~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~L~~H~~~~H~  737 (843)
                      |.|++|++ ..+...|..|+...|..+..                    .+.|++|...+.  ..|..|+...|+
T Consensus         3 f~CP~C~~-~~~~~~L~~H~~~~H~~~~~--------------------~v~CPiC~~~~~--~~l~~Hl~~~H~   54 (54)
T PF05605_consen    3 FTCPYCGK-GFSESSLVEHCEDEHRSESK--------------------NVVCPICSSRVT--DNLIRHLNSQHR   54 (54)
T ss_pred             cCCCCCCC-ccCHHHHHHHHHhHCcCCCC--------------------CccCCCchhhhh--hHHHHHHHHhcC
Confidence            99999999 56678999999998987643                    289999999766  499999998884

Di19 has been found to be strongly expressed in both the roots and leaves of Arabidopsis thaliana during progressive drought [], whilst RING finger proteins are thought to play a role in spermatogenesis. The precise function is unknown.

>PHA00732 hypothetical protein

Probab=98.21  E-value=4.2e-07  Score=67.74  Aligned_cols=46  Identities=26%  Similarity=0.590  Sum_probs=39.6

Q ss_pred             ccccchhhhhhhHHHHhhhhhhhcCCCCCCcchhhhhcCCcceeeeeecCCCCCCCCccccchhhchhhhhhhhhhhHHH
Q psy8169         713 IRCELCDKSFTRKDSLKKHNRIFHGGADPKVMDEQMARGSADFLEVVLNEDGEGEPVSITNEILCKICNRTFTRNYNLKK  792 (843)
Q Consensus       713 ~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~C~~~F~~~~~L~~  792 (843)
                      |+|+.|++.|.+...|..|++.+|.+                                    +.|+.||++|.   .|..
T Consensus         2 y~C~~Cgk~F~s~s~Lk~H~r~~H~~------------------------------------~~C~~CgKsF~---~l~~   42 (79)
T PHA00732          2 FKCPICGFTTVTLFALKQHARRNHTL------------------------------------TKCPVCNKSYR---RLNQ   42 (79)
T ss_pred             ccCCCCCCccCCHHHHHHHhhcccCC------------------------------------CccCCCCCEeC---Chhh
Confidence            89999999999999999999865541                                    56999999997   5999


Q ss_pred             HHhHh
Q psy8169         793 HMKTV  797 (843)
Q Consensus       793 H~~~~  797 (843)
                      |+++.
T Consensus        43 H~~~~   47 (79)
T PHA00732         43 HFYSQ   47 (79)
T ss_pred             hhccc
Confidence            99554

>PHA00616 hypothetical protein

Probab=98.17  E-value=1e-06  Score=55.59  Aligned_cols=35  Identities=17%  Similarity=0.363  Sum_probs=27.0

Q ss_pred             ccccccchhhcCCHHHHHHHHhhccCCCCCccccccc
Q psy8169          17 NHMCELCYKVFESRENLMRHLKIHDDKESKRFKCEQC   53 (843)
Q Consensus        17 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~C~~C   53 (843)
                      +|+|+.||+.|..++.|..|++.|++  .++|+|+.=
T Consensus         1 pYqC~~CG~~F~~~s~l~~H~r~~hg--~~~~~~~~~   35 (44)
T PHA00616          1 MYQCLRCGGIFRKKKEVIEHLLSVHK--QNKLTLEYF   35 (44)
T ss_pred             CCccchhhHHHhhHHHHHHHHHHhcC--CCccceeEE
Confidence            57888888888888888888888887  477777653

>PHA00732 hypothetical protein

Probab=98.10  E-value=1.7e-06  Score=64.58  Aligned_cols=44  Identities=27%  Similarity=0.466  Sum_probs=34.4

Q ss_pred             ccccccchhhcCCHHHHHHHHhh-ccCCCCCcccccccccccCCHHHHHHhHH
Q psy8169          17 NHMCELCYKVFESRENLMRHLKI-HDDKESKRFKCEQCDKRFSSNAELNKHSS   68 (843)
Q Consensus        17 ~~~C~~C~~~f~~~~~l~~H~~~-h~~~~~~~~~C~~C~~~f~~~~~l~~H~~   68 (843)
                      +|.|+.|++.|.+..+|..|++. |.     ++.|+.|++.|.   .|..|++
T Consensus         1 py~C~~Cgk~F~s~s~Lk~H~r~~H~-----~~~C~~CgKsF~---~l~~H~~   45 (79)
T PHA00732          1 MFKCPICGFTTVTLFALKQHARRNHT-----LTKCPVCNKSYR---RLNQHFY   45 (79)
T ss_pred             CccCCCCCCccCCHHHHHHHhhcccC-----CCccCCCCCEeC---Chhhhhc
Confidence            57888888888888888888874 53     357888888887   4777873

>PHA00616 hypothetical protein

Probab=98.05  E-value=2.2e-06  Score=54.08  Aligned_cols=39  Identities=21%  Similarity=0.421  Sum_probs=31.6

Q ss_pred             eeecCcChhccCChHHHHHHHHHhcCCCceeccccchhc
Q psy8169         275 YLTCLICFKTFLTEVDLGKHMKMHMDDNQIQCRFCNKYF  313 (843)
Q Consensus       275 ~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~~C~~~f  313 (843)
                      +|+|+.||+.|.....|..|++.|+++++|.|++--..|
T Consensus         1 pYqC~~CG~~F~~~s~l~~H~r~~hg~~~~~~~~~y~~f   39 (44)
T PHA00616          1 MYQCLRCGGIFRKKKEVIEHLLSVHKQNKLTLEYFYIYF   39 (44)
T ss_pred             CCccchhhHHHhhHHHHHHHHHHhcCCCccceeEEEEEE
Confidence            478999999999999999999999999888887644333

>PF00096 zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR007087 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=97.82  E-value=1e-05  Score=44.63  Aligned_cols=23  Identities=43%  Similarity=0.846  Sum_probs=15.4

Q ss_pred             cccccchhhcCCHHHHHHHHhhc
Q psy8169          18 HMCELCYKVFESRENLMRHLKIH   40 (843)
Q Consensus        18 ~~C~~C~~~f~~~~~l~~H~~~h   40 (843)
                      |.|++|+++|.++..|..|++.|
T Consensus         1 y~C~~C~~~f~~~~~l~~H~~~H   23 (23)
T PF00096_consen    1 YKCPICGKSFSSKSNLKRHMRRH   23 (23)
T ss_dssp             EEETTTTEEESSHHHHHHHHHHH
T ss_pred             CCCCCCCCccCCHHHHHHHHhHC
Confidence            56677777777777777776654

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger: #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C], where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter []. This entry represents the classical C2H2 zinc finger domain. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0008270 zinc ion binding, 0005622 intracellular; PDB: 2D9H_A 2EPC_A 1SP1_A 1VA3_A 2WBT_B 2ELR_A 2YTP_A 2YTT_A 1VA1_A 2ELO_A ....

>PF00096 zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR007087 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=97.76  E-value=7.8e-06  Score=45.12  Aligned_cols=22  Identities=41%  Similarity=0.937  Sum_probs=21.0

Q ss_pred             hhhchhhhhhhhhhhHHHHHhH
Q psy8169         775 ILCKICNRTFTRNYNLKKHMKT  796 (843)
Q Consensus       775 ~~C~~C~~~F~~~~~L~~H~~~  796 (843)
                      |.|+.|++.|.+.+.|..||+.
T Consensus         1 y~C~~C~~~f~~~~~l~~H~~~   22 (23)
T PF00096_consen    1 YKCPICGKSFSSKSNLKRHMRR   22 (23)
T ss_dssp             EEETTTTEEESSHHHHHHHHHH
T ss_pred             CCCCCCCCccCCHHHHHHHHhH
Confidence            5799999999999999999998

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger: #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C], where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter []. This entry represents the classical C2H2 zinc finger domain. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0008270 zinc ion binding, 0005622 intracellular; PDB: 2D9H_A 2EPC_A 1SP1_A 1VA3_A 2WBT_B 2ELR_A 2YTP_A 2YTT_A 1VA1_A 2ELO_A ....

>PF13894 zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP_A 2DLK_A 1X6H_A 2EOU_A 2EMB_A 2GQJ_A 2CSH_A 2WBT_B 2ELM_A

Probab=97.67  E-value=1.4e-05  Score=44.87  Aligned_cols=24  Identities=38%  Similarity=0.895  Sum_probs=20.8

Q ss_pred             hhhchhhhhhhhhhhHHHHHhHhh
Q psy8169         775 ILCKICNRTFTRNYNLKKHMKTVH  798 (843)
Q Consensus       775 ~~C~~C~~~F~~~~~L~~H~~~~H  798 (843)
                      |.|++|++.|.+...|..|++++|
T Consensus         1 ~~C~~C~~~~~~~~~l~~H~~~~H   24 (24)
T PF13894_consen    1 FQCPICGKSFRSKSELRQHMRTHH   24 (24)
T ss_dssp             EE-SSTS-EESSHHHHHHHHHHHS
T ss_pred             CCCcCCCCcCCcHHHHHHHHHhhC
Confidence            579999999999999999999987

...

>KOG2231|consensus

Probab=97.57  E-value=0.00013  Score=77.26  Aligned_cols=97  Identities=26%  Similarity=0.520  Sum_probs=59.2

Q ss_pred             CHHHHHHHHhhccC-ccccCc-cccCcccccccchhhHHHhhhhcCCCccCCccc-cCCcccccCCHHHHHHHHhhhcCC
Q psy8169         193 RVYELNIHKKLHED-ESVANQ-LKCEFCGKVFLKKSNLKAHIENNHLDYSCLECK-AVGEEISFDTKKNLLLHLKTKHKN  269 (843)
Q Consensus       193 ~~~~L~~H~~~h~~-~~~~~~-~~C~~C~~~f~~~~~l~~H~~~~H~~~~C~~C~-~~~~~~~~~~~~~l~~H~~~~~~~  269 (843)
                      +...|..|+..-.. +...+. -.|.+|...|.....|..|++..|  |.|-.|. ..++...|.....|..|.+..|  
T Consensus       161 t~~el~~h~~~gd~d~~s~rGhp~C~~C~~~fld~~el~rH~~~~h--~~chfC~~~~~~neyy~~~~dLe~HfR~~H--  236 (669)
T KOG2231|consen  161 TRAELNLHLMFGDPDDESCRGHPLCKFCHERFLDDDELYRHLRFDH--EFCHFCDYKTGQNEYYNDYDDLEEHFRKGH--  236 (669)
T ss_pred             hHHHHHHHHhcCCCccccccCCccchhhhhhhccHHHHHHhhccce--eheeecCcccccchhcccchHHHHHhhhcC--
Confidence            44556666554322 211111 457788888888888888876666  5566664 3344556677778888888776  


Q ss_pred             CCCcceeecC--cCh-hccCChHHHHHHHHHhc
Q psy8169         270 VISNVYLTCL--ICF-KTFLTEVDLGKHMKMHM  299 (843)
Q Consensus       270 ~~~~~~~~C~--~C~-~~f~~~~~L~~H~~~H~  299 (843)
                            |.|.  .|. +.|.....+..|++.|.
T Consensus       237 ------flCE~~~C~~~~f~~~~~~ei~lk~~~  263 (669)
T KOG2231|consen  237 ------FLCEEEFCRTKKFYVAFELEIELKAHN  263 (669)
T ss_pred             ------ccccccccccceeeehhHHHHHHHhhc
Confidence                  6676  564 44555556666666554

>PF12756 zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB: 2DMI_A

Probab=97.57  E-value=2.1e-05  Score=64.27  Aligned_cols=73  Identities=26%  Similarity=0.588  Sum_probs=22.1

Q ss_pred             CCccccccccchhhhhhhhhccccCCCCCCccchhh-cccccccccccccccccchhhhhhhHHHHhhhhhhhc
Q psy8169         664 PCTLCDKTFTRKDSLKKHIRIFHTQNQPQHTNVIEV-ALGARANAAFIDRIRCELCDKSFTRKDSLKKHNRIFH  736 (843)
Q Consensus       664 ~C~~C~~~f~~~~~L~~H~~~~H~~~~p~~~~~~~~-~~~~~~~~~~~~~~~C~~C~~~f~~~~~L~~H~~~~H  736 (843)
                      +|.+|+..|.+...|..|+...|.-..+..-.+... .+...........+.|.+|++.|.+...|..||+.++
T Consensus         1 ~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~~~l~~~~~~~~~~~~~~~~~~~C~~C~~~f~s~~~l~~Hm~~~~   74 (100)
T PF12756_consen    1 QCLFCDESFSSVDDLLQHMKKKHGFDIPDQKYLVDPNRLLNYLRKKVKESFRCPYCNKTFRSREALQEHMRSKH   74 (100)
T ss_dssp             ------------------------------------------------SSEEBSSSS-EESSHHHHHHHHHHTT
T ss_pred             CccccccccccccccccccccccccccccccccccccccccccccccCCCCCCCccCCCCcCHHHHHHHHcCcc
Confidence            499999999999999999998887654421111110 1111111111224999999999999999999999753

>PF13894 zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP_A 2DLK_A 1X6H_A 2EOU_A 2EMB_A 2GQJ_A 2CSH_A 2WBT_B 2ELM_A

Probab=97.44  E-value=4e-05  Score=42.95  Aligned_cols=24  Identities=42%  Similarity=0.913  Sum_probs=20.7

Q ss_pred             ccccchhhhhhhHHHHhhhhhhhc
Q psy8169         713 IRCELCDKSFTRKDSLKKHNRIFH  736 (843)
Q Consensus       713 ~~C~~C~~~f~~~~~L~~H~~~~H  736 (843)
                      |.|++|++.|.+...|..|++.+|
T Consensus         1 ~~C~~C~~~~~~~~~l~~H~~~~H   24 (24)
T PF13894_consen    1 FQCPICGKSFRSKSELRQHMRTHH   24 (24)
T ss_dssp             EE-SSTS-EESSHHHHHHHHHHHS
T ss_pred             CCCcCCCCcCCcHHHHHHHHHhhC
Confidence            689999999999999999999876

...

>PF12756 zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB: 2DMI_A

Probab=97.43  E-value=6.4e-05  Score=61.42  Aligned_cols=72  Identities=25%  Similarity=0.453  Sum_probs=12.9

Q ss_pred             CCcchhccCChhHHHHhHhhhcCCCCcccccccccccccCHHHHHHHHhhcCCCcccccchhHhhcCHHHHHHHHhhc
Q psy8169         127 CDLCGKNFSQRNNLKRHLEEVHRTDGMKFECYVCSKVLATSHSLKRHLLIHNGPKYTCEICAKEFTRVYELNIHKKLH  204 (843)
Q Consensus       127 C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~C~~C~~~f~~~~~L~~H~~~h  204 (843)
                      |..|+..|.+...|..|+...|... .+     ....+.....+..+++.-....+.|.+|+..|.+...|..||+.+
T Consensus         2 C~~C~~~f~~~~~l~~H~~~~H~~~-~~-----~~~~l~~~~~~~~~~~~~~~~~~~C~~C~~~f~s~~~l~~Hm~~~   73 (100)
T PF12756_consen    2 CLFCDESFSSVDDLLQHMKKKHGFD-IP-----DQKYLVDPNRLLNYLRKKVKESFRCPYCNKTFRSREALQEHMRSK   73 (100)
T ss_dssp             -----------------------------------------------------SSEEBSSSS-EESSHHHHHHHHHHT
T ss_pred             ccccccccccccccccccccccccc-cc-----cccccccccccccccccccCCCCCCCccCCCCcCHHHHHHHHcCc
Confidence            6666666666666666665555211 00     111222333333343333233355555555555555555555543

>COG5189 SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]

Probab=97.38  E-value=5e-05  Score=70.25  Aligned_cols=71  Identities=25%  Similarity=0.466  Sum_probs=44.0

Q ss_pred             CCceeCCC--CCCcccchhhHHhhhcCCCCCCCCCChHHHhhhhhhhhcCCCcccCCcchhccCChhHHHHhHh
Q psy8169          74 LKLHECDL--CGKNFSQRNNLKRQANGSNVNNRFSSNAELNKHSSAIHQRLKLHECDLCGKNFSQRNNLKRHLE  145 (843)
Q Consensus        74 ~~~~~C~~--C~~~f~~~~~l~~H~~~~~~~~~~~~~~~l~~h~~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~  145 (843)
                      +|||+|++  |.+.+.....|+-|+....|.......+.-..+. ..-...|||+|.+|++.++....|+.|..
T Consensus       347 ~KpykCpV~gC~K~YknqnGLKYH~lhGH~~~~~~~~p~p~~~~-~F~~~~KPYrCevC~KRYKNlNGLKYHr~  419 (423)
T COG5189         347 GKPYKCPVEGCNKKYKNQNGLKYHMLHGHQNQKLHENPSPEKMN-IFSAKDKPYRCEVCDKRYKNLNGLKYHRK  419 (423)
T ss_pred             CceecCCCCCchhhhccccchhhhhhccccCcccCCCCCccccc-cccccCCceeccccchhhccCccceeccc
Confidence            36666665  6666666666666665444443333222222222 22345688999999999988888888865

>KOG2231|consensus

Probab=97.29  E-value=0.00044  Score=73.44  Aligned_cols=32  Identities=38%  Similarity=0.814  Sum_probs=23.2

Q ss_pred             cccccccccCCHHHHHHhHHhhccCCCceeCCCCCC
Q psy8169          49 KCEQCDKRFSSNAELNKHSSAIHQRLKLHECDLCGK   84 (843)
Q Consensus        49 ~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~C~~C~~   84 (843)
                      .|.+| ..|.+...|+.|+...|.   .+.|.+|-.
T Consensus       117 ~~~~c-~~~~s~~~Lk~H~~~~H~---~~~c~lC~~  148 (669)
T KOG2231|consen  117 ECLHC-TEFKSVENLKNHMRDQHK---LHLCSLCLQ  148 (669)
T ss_pred             CCccc-cchhHHHHHHHHHHHhhh---hhccccccc
Confidence            47777 777788899999876664   466777643

>PF13912 zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9_A 2L1O_A 1NJQ_A 2EN8_A 2EMM_A 1FV5_A 1Y0J_B 2L6Z_B

Probab=97.28  E-value=0.00015  Score=41.83  Aligned_cols=25  Identities=32%  Similarity=0.487  Sum_probs=17.0

Q ss_pred             ccccccchhhcCCHHHHHHHHhhcc
Q psy8169          17 NHMCELCYKVFESRENLMRHLKIHD   41 (843)
Q Consensus        17 ~~~C~~C~~~f~~~~~l~~H~~~h~   41 (843)
                      +|.|..|++.|.+..+|..|++.|.
T Consensus         1 ~~~C~~C~~~F~~~~~l~~H~~~h~   25 (27)
T PF13912_consen    1 PFECDECGKTFSSLSALREHKRSHC   25 (27)
T ss_dssp             SEEETTTTEEESSHHHHHHHHCTTT
T ss_pred             CCCCCccCCccCChhHHHHHhHHhc
Confidence            4667777777777777777776654

>PF13912 zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9_A 2L1O_A 1NJQ_A 2EN8_A 2EMM_A 1FV5_A 1Y0J_B 2L6Z_B

Probab=97.27  E-value=7.3e-05  Score=43.17  Aligned_cols=25  Identities=24%  Similarity=0.550  Sum_probs=23.6

Q ss_pred             hhhchhhhhhhhhhhHHHHHhHhhc
Q psy8169         775 ILCKICNRTFTRNYNLKKHMKTVHK  799 (843)
Q Consensus       775 ~~C~~C~~~F~~~~~L~~H~~~~H~  799 (843)
                      |.|..|++.|.+...|..|++.+++
T Consensus         2 ~~C~~C~~~F~~~~~l~~H~~~h~~   26 (27)
T PF13912_consen    2 FECDECGKTFSSLSALREHKRSHCS   26 (27)
T ss_dssp             EEETTTTEEESSHHHHHHHHCTTTT
T ss_pred             CCCCccCCccCChhHHHHHhHHhcC
Confidence            8899999999999999999998875

>KOG2785|consensus

Probab=97.07  E-value=0.0012  Score=63.86  Aligned_cols=72  Identities=21%  Similarity=0.308  Sum_probs=50.5

Q ss_pred             CCCccccccccchhhhhhhhhccccCCCCCCccch-hhcccccccccccccccccchh---hhhhhHHHHhhhhhh
Q psy8169         663 IPCTLCDKTFTRKDSLKKHIRIFHTQNQPQHTNVI-EVALGARANAAFIDRIRCELCD---KSFTRKDSLKKHNRI  734 (843)
Q Consensus       663 ~~C~~C~~~f~~~~~L~~H~~~~H~~~~p~~~~~~-~~~~~~~~~~~~~~~~~C~~C~---~~f~~~~~L~~H~~~  734 (843)
                      -.|-+|++.|.+...-..||...|+---|-.-... ..++-..........|.|-+|+   +.|.+-.+.+.||+.
T Consensus       167 t~CLfC~~~~k~~e~~~~HM~~~HgffIPdreYL~D~~GLl~YLgeKV~~~~~CL~CN~~~~~f~sleavr~HM~~  242 (390)
T KOG2785|consen  167 TDCLFCDKKSKSLEENLKHMFKEHGFFIPDREYLTDEKGLLKYLGEKVGIGFICLFCNELGRPFSSLEAVRAHMRD  242 (390)
T ss_pred             cceeecCCCcccHHHHHHHHhhccCCcCCchHhhhchhHHHHHHHHHhccCceEEEeccccCcccccHHHHHHHhh
Confidence            67999999999999999999997764433111000 1122222223333458999999   999999999999965

>KOG2785|consensus

Probab=97.06  E-value=0.0014  Score=63.52  Aligned_cols=74  Identities=23%  Similarity=0.383  Sum_probs=49.5

Q ss_pred             ceecccccccccChHHHHHHHHhhccCCCCcccccccCCCCcchhhhHhhhccCCCCCCcccccccc---cccCChHHHH
Q psy8169         446 IIQCHICLKTFAKKDSLKKHMKVFHTYISPDAIKEESGEGKPNILEVILQEGKVPNNNAIIQCRICS---KTFTRKDSLR  522 (843)
Q Consensus       446 ~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~C~~C~---~~f~~~~~L~  522 (843)
                      |-.|-+|+..+.+...-..||...|....|+-.-.....   -.+.-+.....     .-|.|-.|+   +.|.+..+.+
T Consensus       166 Pt~CLfC~~~~k~~e~~~~HM~~~HgffIPdreYL~D~~---GLl~YLgeKV~-----~~~~CL~CN~~~~~f~sleavr  237 (390)
T KOG2785|consen  166 PTDCLFCDKKSKSLEENLKHMFKEHGFFIPDREYLTDEK---GLLKYLGEKVG-----IGFICLFCNELGRPFSSLEAVR  237 (390)
T ss_pred             CcceeecCCCcccHHHHHHHHhhccCCcCCchHhhhchh---HHHHHHHHHhc-----cCceEEEeccccCcccccHHHH
Confidence            367999999999999999999998876555321110000   01111111111     117899998   9999999999


Q ss_pred             HHHhh
Q psy8169         523 KHMRR  527 (843)
Q Consensus       523 ~H~~~  527 (843)
                      .||..
T Consensus       238 ~HM~~  242 (390)
T KOG2785|consen  238 AHMRD  242 (390)
T ss_pred             HHHhh
Confidence            99986

>PF13909 zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W_A

Probab=96.89  E-value=0.00037  Score=38.74  Aligned_cols=24  Identities=33%  Similarity=0.627  Sum_probs=20.2

Q ss_pred             hhhchhhhhhhhhhhHHHHHhHhhc
Q psy8169         775 ILCKICNRTFTRNYNLKKHMKTVHK  799 (843)
Q Consensus       775 ~~C~~C~~~F~~~~~L~~H~~~~H~  799 (843)
                      |+|+.|++..+ ...|.+|++.+|+
T Consensus         1 y~C~~C~y~t~-~~~l~~H~~~~H~   24 (24)
T PF13909_consen    1 YKCPHCSYSTS-KSNLKRHLKRHHP   24 (24)
T ss_dssp             EE-SSSS-EES-HHHHHHHHHHHHS
T ss_pred             CCCCCCCCcCC-HHHHHHHHHhhCc
Confidence            67999999998 9999999999985

>KOG2482|consensus

Probab=96.88  E-value=0.004  Score=58.86  Aligned_cols=77  Identities=21%  Similarity=0.366  Sum_probs=47.9

Q ss_pred             eecccccccccChHHHHHHHHhhccCCCCcccccccCCCCcchhhhHhhhccCCCCCCcccccccccccCChHHHHHHHh
Q psy8169         447 IQCHICLKTFAKKDSLKKHMKVFHTYISPDAIKEESGEGKPNILEVILQEGKVPNNNAIIQCRICSKTFTRKDSLRKHMR  526 (843)
Q Consensus       447 ~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~L~~H~~  526 (843)
                      ..|-+|.....+...|..||+.+|..--   .+..+ ...-++...+....-.-.......|-.|.-.|.....|..||.
T Consensus       280 v~CLfC~~~~en~~~l~eHmk~vHe~Dl---~Ki~s-d~~Ln~YqrvrviNyiRkq~~~~~c~~cd~~F~~e~~l~~hm~  355 (423)
T KOG2482|consen  280 VVCLFCTNFYENPVFLFEHMKIVHEFDL---LKIQS-DYSLNFYQRVRVINYIRKQKKKSRCAECDLSFWKEPGLLIHMV  355 (423)
T ss_pred             eEEEeeccchhhHHHHHHHHHHHHHhhH---Hhhcc-ccccchhhhhhHHHHHHHHhhccccccccccccCcchhhhhcc
Confidence            6899999999999999999999996411   11111 1011211111111000011122579999999999999999997


Q ss_pred             h
Q psy8169         527 R  527 (843)
Q Consensus       527 ~  527 (843)
                      .
T Consensus       356 e  356 (423)
T KOG2482|consen  356 E  356 (423)
T ss_pred             c
Confidence            5

>PF13909 zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W_A

Probab=96.77  E-value=0.00042  Score=38.55  Aligned_cols=24  Identities=33%  Similarity=0.620  Sum_probs=20.1

Q ss_pred             ccccchhhhhhhHHHHhhhhhhhcC
Q psy8169         713 IRCELCDKSFTRKDSLKKHNRIFHG  737 (843)
Q Consensus       713 ~~C~~C~~~f~~~~~L~~H~~~~H~  737 (843)
                      |+|+.|++... +..|.+|++.+|+
T Consensus         1 y~C~~C~y~t~-~~~l~~H~~~~H~   24 (24)
T PF13909_consen    1 YKCPHCSYSTS-KSNLKRHLKRHHP   24 (24)
T ss_dssp             EE-SSSS-EES-HHHHHHHHHHHHS
T ss_pred             CCCCCCCCcCC-HHHHHHHHHhhCc
Confidence            68999999998 8999999999885

>COG5189 SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]

Probab=96.75  E-value=0.0015  Score=60.84  Aligned_cols=70  Identities=26%  Similarity=0.481  Sum_probs=47.3

Q ss_pred             CCCCCcc--ccccccchhhhhhhhhccccCCCCCCccchhhcccccccccccccccccchhhhhhhHHHHhhhhh
Q psy8169         661 DRIPCTL--CDKTFTRKDSLKKHIRIFHTQNQPQHTNVIEVALGARANAAFIDRIRCELCDKSFTRKDSLKKHNR  733 (843)
Q Consensus       661 ~~~~C~~--C~~~f~~~~~L~~H~~~~H~~~~p~~~~~~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~L~~H~~  733 (843)
                      ++|+|++  |.++++++..|+.|+.--|...+.....-.+   ......+.-++|+|++|+|.+.....|+-|..
T Consensus       348 KpykCpV~gC~K~YknqnGLKYH~lhGH~~~~~~~~p~p~---~~~~F~~~~KPYrCevC~KRYKNlNGLKYHr~  419 (423)
T COG5189         348 KPYKCPVEGCNKKYKNQNGLKYHMLHGHQNQKLHENPSPE---KMNIFSAKDKPYRCEVCDKRYKNLNGLKYHRK  419 (423)
T ss_pred             ceecCCCCCchhhhccccchhhhhhccccCcccCCCCCcc---ccccccccCCceeccccchhhccCccceeccc
Confidence            5699988  9999999999999987333221111000000   01111233478999999999999999999964

>COG5236 Uncharacterized conserved protein, contains RING Zn-finger [General function prediction only]

Probab=96.64  E-value=0.0022  Score=60.47  Aligned_cols=140  Identities=29%  Similarity=0.461  Sum_probs=75.0

Q ss_pred             ccccc--ccccccCCHHHHHHhHHhhccCCCceeCCCCCC---cccchhhHHhhhcCCCCCCCCCChHHHhhhhhhhhcC
Q psy8169          47 RFKCE--QCDKRFSSNAELNKHSSAIHQRLKLHECDLCGK---NFSQRNNLKRQANGSNVNNRFSSNAELNKHSSAIHQR  121 (843)
Q Consensus        47 ~~~C~--~C~~~f~~~~~l~~H~~~~h~~~~~~~C~~C~~---~f~~~~~l~~H~~~~~~~~~~~~~~~l~~h~~~~h~~  121 (843)
                      .|.|+  .|.........|..|....|.   .+.|.+|-.   .|.....|             .++..|..|. ..-..
T Consensus       151 ~F~CP~skc~~~C~~~k~lk~H~K~~H~---~~~C~~C~~nKk~F~~E~~l-------------F~~~~Lr~H~-~~G~~  213 (493)
T COG5236         151 SFKCPKSKCHRRCGSLKELKKHYKAQHG---FVLCSECIGNKKDFWNEIRL-------------FRSSTLRDHK-NGGLE  213 (493)
T ss_pred             HhcCCchhhhhhhhhHHHHHHHHHhhcC---cEEhHhhhcCcccCccceee-------------eecccccccc-cCCcc
Confidence            47887  488888888899999866554   467877732   34332211             1122222222 11111


Q ss_pred             CCc----ccCCcchhccCChhHHHHhHhhhcCCCCcccccccccccccCHHHHHHHHhhcCCCcccccchhHhhcCHHHH
Q psy8169         122 LKL----HECDLCGKNFSQRNNLKRHLEEVHRTDGMKFECYVCSKVLATSHSLKRHLLIHNGPKYTCEICAKEFTRVYEL  197 (843)
Q Consensus       122 ~~~----~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~C~~C~~~f~~~~~L  197 (843)
                      +..    -.|..|...|-+-..|..|++..|      -.|.+|++.-.                    .=...|.+...|
T Consensus       214 e~GFKGHP~C~FC~~~FYdDDEL~~HcR~~H------E~ChICD~v~p--------------------~~~QYFK~Y~~L  267 (493)
T COG5236         214 EEGFKGHPLCIFCKIYFYDDDELRRHCRLRH------EACHICDMVGP--------------------IRYQYFKSYEDL  267 (493)
T ss_pred             ccCcCCCchhhhccceecChHHHHHHHHhhh------hhhhhhhccCc--------------------cchhhhhCHHHH
Confidence            111    247777777777777777777555      24666654311                    011234455555


Q ss_pred             HHHHhhccCccccCccccCc--cc----ccccchhhHHHhhhhcC
Q psy8169         198 NIHKKLHEDESVANQLKCEF--CG----KVFLKKSNLKAHIENNH  236 (843)
Q Consensus       198 ~~H~~~h~~~~~~~~~~C~~--C~----~~f~~~~~l~~H~~~~H  236 (843)
                      ..|.+.-+       |.|.+  |.    ++|.....|..|+-..|
T Consensus       268 e~HF~~~h-------y~ct~qtc~~~k~~vf~~~~el~~h~~~~h  305 (493)
T COG5236         268 EAHFRNAH-------YCCTFQTCRVGKCYVFPYHTELLEHLTRFH  305 (493)
T ss_pred             HHHhhcCc-------eEEEEEEEecCcEEEeccHHHHHHHHHHHh
Confidence            55554322       33332  21    46777777777776666

>PF09237 GAGA: GAGA factor; InterPro: IPR015318 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=96.59  E-value=0.0011  Score=42.78  Aligned_cols=28  Identities=25%  Similarity=0.573  Sum_probs=22.1

Q ss_pred             ccccchhhhhhhHHHHhhhhhhhcCCCCC
Q psy8169         713 IRCELCDKSFTRKDSLKKHNRIFHGGADP  741 (843)
Q Consensus       713 ~~C~~C~~~f~~~~~L~~H~~~~H~~~~~  741 (843)
                      -.|++|+..+....+|++|+...|+ .+|
T Consensus        25 atCP~C~a~~~~srnLrRHle~~H~-~k~   52 (54)
T PF09237_consen   25 ATCPICGAVIRQSRNLRRHLEIRHF-KKP   52 (54)
T ss_dssp             EE-TTT--EESSHHHHHHHHHHHTT-TS-
T ss_pred             CCCCcchhhccchhhHHHHHHHHhc-ccC
Confidence            7899999999999999999999998 444

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. Members of this entry bind to a 5'-GAGAG-3' DNA consensus binding site, and contain a Cys2-His2 zinc finger core as well as an N-terminal extension containing two highly basic regions. The zinc finger core binds in the DNA major groove and recognises the first three GAG bases of the consensus in a manner similar to that seen in other classical zinc finger-DNA complexes. The second basic region forms a helix that interacts in the major groove recognising the last G of the consensus, while the first basic region wraps around the DNA in the minor groove and recognises the A in the fourth position of the consensus sequence []. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; PDB: 1YUI_A 1YUJ_A.

>PF09237 GAGA: GAGA factor; InterPro: IPR015318 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=96.53  E-value=0.00097  Score=43.11  Aligned_cols=27  Identities=26%  Similarity=0.583  Sum_probs=22.1

Q ss_pred             hhhchhhhhhhhhhhHHHHHhHhhccC
Q psy8169         775 ILCKICNRTFTRNYNLKKHMKTVHKID  801 (843)
Q Consensus       775 ~~C~~C~~~F~~~~~L~~H~~~~H~~~  801 (843)
                      -.|++|+..++...+|++||...|+..
T Consensus        25 atCP~C~a~~~~srnLrRHle~~H~~k   51 (54)
T PF09237_consen   25 ATCPICGAVIRQSRNLRRHLEIRHFKK   51 (54)
T ss_dssp             EE-TTT--EESSHHHHHHHHHHHTTTS
T ss_pred             CCCCcchhhccchhhHHHHHHHHhccc
Confidence            669999999999999999999999864

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. Members of this entry bind to a 5'-GAGAG-3' DNA consensus binding site, and contain a Cys2-His2 zinc finger core as well as an N-terminal extension containing two highly basic regions. The zinc finger core binds in the DNA major groove and recognises the first three GAG bases of the consensus in a manner similar to that seen in other classical zinc finger-DNA complexes. The second basic region forms a helix that interacts in the major groove recognising the last G of the consensus, while the first basic region wraps around the DNA in the minor groove and recognises the A in the fourth position of the consensus sequence []. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; PDB: 1YUI_A 1YUJ_A.

>KOG4173|consensus

Probab=96.52  E-value=0.0019  Score=55.95  Aligned_cols=93  Identities=24%  Similarity=0.534  Sum_probs=72.2

Q ss_pred             CCCCCcc--ccccccchhhhhhhhhccccCCCCCCccchhhcccccccccccccccccchhhhhhhHHHHhhhhhhhcCC
Q psy8169         661 DRIPCTL--CDKTFTRKDSLKKHIRIFHTQNQPQHTNVIEVALGARANAAFIDRIRCELCDKSFTRKDSLKKHNRIFHGG  738 (843)
Q Consensus       661 ~~~~C~~--C~~~f~~~~~L~~H~~~~H~~~~p~~~~~~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~  738 (843)
                      ..|.|++  |...|.+......|+.+-|+                         -.|.+|.+.|.+...|..|+..-|..
T Consensus        78 ~~~~cqvagc~~~~d~lD~~E~hY~~~h~-------------------------~sCs~C~r~~Pt~hLLd~HI~E~HDs  132 (253)
T KOG4173|consen   78 PAFACQVAGCCQVFDALDDYEHHYHTLHG-------------------------NSCSFCKRAFPTGHLLDAHILEWHDS  132 (253)
T ss_pred             ccccccccchHHHHhhhhhHHHhhhhccc-------------------------chhHHHHHhCCchhhhhHHHHHHHHH
Confidence            3488988  99999999999999987676                         46999999999999999999877741


Q ss_pred             CCCCcchhhhhcCCcceeeeeecCCCCCCCCccccchhhch--hhhhhhhhhhHHHHHhHhhccCC
Q psy8169         739 ADPKVMDEQMARGSADFLEVVLNEDGEGEPVSITNEILCKI--CNRTFTRNYNLKKHMKTVHKIDD  802 (843)
Q Consensus       739 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~--C~~~F~~~~~L~~H~~~~H~~~~  802 (843)
                       -....   ..++                    -..|+|-+  |+..|.+...-+.||-..|....
T Consensus       133 -~Fqa~---veRG--------------------~dMy~ClvEgCt~KFkT~r~RkdH~I~~Hk~Pa  174 (253)
T KOG4173|consen  133 -LFQAL---VERG--------------------QDMYQCLVEGCTEKFKTSRDRKDHMIRMHKYPA  174 (253)
T ss_pred             -HHHHH---HHcC--------------------ccHHHHHHHhhhhhhhhhhhhhhHHHHhccCCc
Confidence             00000   0000                    11399977  99999999999999999998643

>smart00355 ZnF_C2H2 zinc finger

Probab=96.52  E-value=0.0021  Score=36.60  Aligned_cols=24  Identities=38%  Similarity=0.719  Sum_probs=16.1

Q ss_pred             cccccchhhcCCHHHHHHHHhhcc
Q psy8169          18 HMCELCYKVFESRENLMRHLKIHD   41 (843)
Q Consensus        18 ~~C~~C~~~f~~~~~l~~H~~~h~   41 (843)
                      |.|+.|++.|.+...|..|++.|.
T Consensus         1 ~~C~~C~~~f~~~~~l~~H~~~H~   24 (26)
T smart00355        1 YRCPECGKVFKSKSALKEHMRTHX   24 (26)
T ss_pred             CCCCCCcchhCCHHHHHHHHHHhc
Confidence            456777777777777777776553

>PF12874 zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG_A

Probab=96.37  E-value=0.0019  Score=36.30  Aligned_cols=22  Identities=36%  Similarity=0.837  Sum_probs=14.3

Q ss_pred             cccccchhhcCCHHHHHHHHhh
Q psy8169          18 HMCELCYKVFESRENLMRHLKI   39 (843)
Q Consensus        18 ~~C~~C~~~f~~~~~l~~H~~~   39 (843)
                      |.|.+|+++|.+...|..|++.
T Consensus         1 ~~C~~C~~~f~s~~~~~~H~~s   22 (25)
T PF12874_consen    1 FYCDICNKSFSSENSLRQHLRS   22 (25)
T ss_dssp             EEETTTTEEESSHHHHHHHHTT
T ss_pred             CCCCCCCCCcCCHHHHHHHHCc
Confidence            4566666666666666666654

>KOG2482|consensus

Probab=96.33  E-value=0.0039  Score=58.91  Aligned_cols=194  Identities=21%  Similarity=0.318  Sum_probs=100.6

Q ss_pred             cccccccccc-CChHHHHHHHhhhccccCcchhhhhhhhhhhhhhhHHHHhhcccCCCCCcccccccccccchHHHHHHH
Q psy8169         506 IQCRICSKTF-TRKDSLRKHMRRFHIINDTNVKKEFTEGQINRNMLDVILKESGHEIKSRIPCELCYKTFTRKDSLRKHM  584 (843)
Q Consensus       506 ~~C~~C~~~f-~~~~~L~~H~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~L~~H~  584 (843)
                      .+|-.|...+ ..++.+..|+-..|..+-......+-..    ..+..+.. .    ...+.|-+|.+.|..+..|+.||
T Consensus       145 lqClFCn~e~lgnRs~~l~Hlf~~H~lniGlpDniVyvn----elLehLke-k----L~r~~CLyCekifrdkntLkeHM  215 (423)
T KOG2482|consen  145 LQCLFCNNEGLGNRSEILEHLFHVHGLNIGLPDNIVYVN----ELLEHLKE-K----LERLRCLYCEKIFRDKNTLKEHM  215 (423)
T ss_pred             eEEEEecchhcccHHHHHHHHHHHhhhccCCCcceeeHH----HHHHHHHH-H----HhhheeeeeccccCCcHHHHHHH
Confidence            6899998855 4688888999888875533222211111    11111111 1    23789999999999999999999


Q ss_pred             HHh-hccCCCCCCCCCCCCCCC---------cchhhhccCCcccccCccccCcccccCCCcccccCCcCCCccccCCCCC
Q psy8169         585 KIF-HTRRNPSANSGNSGTSAP---------PAVKLEQNGGEKVENSTSVENSTSVENSTSVENSANVENTSSVDNRTSV  654 (843)
Q Consensus       585 ~~~-H~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  654 (843)
                      +.. |..-+|.. ........-         .....+.. .+..+.....+    .             ..+.-..    
T Consensus       216 rkK~HrrinPkn-reYDkfyiINY~ev~ks~t~~~~e~d-ret~~d~~E~D----~-------------~wsDw~e----  272 (423)
T KOG2482|consen  216 RKKRHRRINPKN-REYDKFYIINYLEVGKSWTIVHSEDD-RETNEDINETD----D-------------TWSDWNE----  272 (423)
T ss_pred             HhccCcccCCCc-cccceEEEEeHhhcCCccchhhhhhh-hhhhccccccc----c-------------chhhhhc----
Confidence            863 33333321 111111000         00000000 00000000000    0             0000000    


Q ss_pred             CCCCCCCCCCCccccccccchhhhhhhhhccccCCCCCCccchhhcccccccccc-------cccccccchhhhhhhHHH
Q psy8169         655 GPVAPIDRIPCTLCDKTFTRKDSLKKHIRIFHTQNQPQHTNVIEVALGARANAAF-------IDRIRCELCDKSFTRKDS  727 (843)
Q Consensus       655 ~p~~~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~p~~~~~~~~~~~~~~~~~~-------~~~~~C~~C~~~f~~~~~  727 (843)
                       -.++.....|-+|.....+...|..||..+|..+-.--.  .+..+........       ...-.|-.|.-.|.....
T Consensus       273 -d~a~a~~v~CLfC~~~~en~~~l~eHmk~vHe~Dl~Ki~--sd~~Ln~YqrvrviNyiRkq~~~~~c~~cd~~F~~e~~  349 (423)
T KOG2482|consen  273 -DDAEALSVVCLFCTNFYENPVFLFEHMKIVHEFDLLKIQ--SDYSLNFYQRVRVINYIRKQKKKSRCAECDLSFWKEPG  349 (423)
T ss_pred             -CCCCccceEEEeeccchhhHHHHHHHHHHHHHhhHHhhc--cccccchhhhhhHHHHHHHHhhccccccccccccCcch
Confidence             001111158999999999999999999999964321000  0000110110000       112468999999999999


Q ss_pred             Hhhhhhh
Q psy8169         728 LKKHNRI  734 (843)
Q Consensus       728 L~~H~~~  734 (843)
                      |..||.-
T Consensus       350 l~~hm~e  356 (423)
T KOG2482|consen  350 LLIHMVE  356 (423)
T ss_pred             hhhhccc
Confidence            9999864

>smart00355 ZnF_C2H2 zinc finger

Probab=96.29  E-value=0.002  Score=36.68  Aligned_cols=22  Identities=36%  Similarity=0.747  Sum_probs=20.3

Q ss_pred             hhhchhhhhhhhhhhHHHHHhH
Q psy8169         775 ILCKICNRTFTRNYNLKKHMKT  796 (843)
Q Consensus       775 ~~C~~C~~~F~~~~~L~~H~~~  796 (843)
                      |.|..|++.|.....|..|++.
T Consensus         1 ~~C~~C~~~f~~~~~l~~H~~~   22 (26)
T smart00355        1 YRCPECGKVFKSKSALKEHMRT   22 (26)
T ss_pred             CCCCCCcchhCCHHHHHHHHHH
Confidence            5699999999999999999983

>COG5236 Uncharacterized conserved protein, contains RING Zn-finger [General function prediction only]

Probab=96.23  E-value=0.0047  Score=58.34  Aligned_cols=141  Identities=24%  Similarity=0.415  Sum_probs=75.0

Q ss_pred             cccCCc--chhccCChhHHHHhHhhhcCCCCccccccccc---ccccCHHHHHHHHhhcCCCcccccchhHhhcCHHHHH
Q psy8169         124 LHECDL--CGKNFSQRNNLKRHLEEVHRTDGMKFECYVCS---KVLATSHSLKRHLLIHNGPKYTCEICAKEFTRVYELN  198 (843)
Q Consensus       124 ~~~C~~--C~~~f~~~~~l~~H~~~~h~~~~~~~~C~~C~---~~f~~~~~l~~H~~~h~~~~~~C~~C~~~f~~~~~L~  198 (843)
                      .|.|+.  |...+.....|+.|.+..|+    .+.|.+|-   +.|...                     ...-++..|+
T Consensus       151 ~F~CP~skc~~~C~~~k~lk~H~K~~H~----~~~C~~C~~nKk~F~~E---------------------~~lF~~~~Lr  205 (493)
T COG5236         151 SFKCPKSKCHRRCGSLKELKKHYKAQHG----FVLCSECIGNKKDFWNE---------------------IRLFRSSTLR  205 (493)
T ss_pred             HhcCCchhhhhhhhhHHHHHHHHHhhcC----cEEhHhhhcCcccCccc---------------------eeeeeccccc
Confidence            467764  77777777788888876552    46677764   233211                     1112233344


Q ss_pred             HHHhhccCccccC-ccccCcccccccchhhHHHhhhhcCCCccCCccccCCc--ccccCCHHHHHHHHhhhcCCCCCcce
Q psy8169         199 IHKKLHEDESVAN-QLKCEFCGKVFLKKSNLKAHIENNHLDYSCLECKAVGE--EISFDTKKNLLLHLKTKHKNVISNVY  275 (843)
Q Consensus       199 ~H~~~h~~~~~~~-~~~C~~C~~~f~~~~~l~~H~~~~H~~~~C~~C~~~~~--~~~~~~~~~l~~H~~~~~~~~~~~~~  275 (843)
                      .|...-..+..-+ -=.|.+|...|..-..|..|++..|  -.|.+|+.++.  ...|.+...|..|.+..|        
T Consensus       206 ~H~~~G~~e~GFKGHP~C~FC~~~FYdDDEL~~HcR~~H--E~ChICD~v~p~~~QYFK~Y~~Le~HF~~~h--------  275 (493)
T COG5236         206 DHKNGGLEEEGFKGHPLCIFCKIYFYDDDELRRHCRLRH--EACHICDMVGPIRYQYFKSYEDLEAHFRNAH--------  275 (493)
T ss_pred             ccccCCccccCcCCCchhhhccceecChHHHHHHHHhhh--hhhhhhhccCccchhhhhCHHHHHHHhhcCc--------
Confidence            4433222210000 1135555555555555666655555  23444444432  234666677777766554        


Q ss_pred             eecCc--Ch----hccCChHHHHHHHHHhc
Q psy8169         276 LTCLI--CF----KTFLTEVDLGKHMKMHM  299 (843)
Q Consensus       276 ~~C~~--C~----~~f~~~~~L~~H~~~H~  299 (843)
                      |.|.+  |.    ..|.....|+.|+..-+
T Consensus       276 y~ct~qtc~~~k~~vf~~~~el~~h~~~~h  305 (493)
T COG5236         276 YCCTFQTCRVGKCYVFPYHTELLEHLTRFH  305 (493)
T ss_pred             eEEEEEEEecCcEEEeccHHHHHHHHHHHh
Confidence            55543  31    46888888888886543

>PF12874 zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG_A

Probab=95.82  E-value=0.0053  Score=34.49  Aligned_cols=20  Identities=35%  Similarity=0.798  Sum_probs=10.2

Q ss_pred             ccccccccccCHHHHHHHHh
Q psy8169         156 ECYVCSKVLATSHSLKRHLL  175 (843)
Q Consensus       156 ~C~~C~~~f~~~~~l~~H~~  175 (843)
                      .|.+|++.|.+...|..|++
T Consensus         2 ~C~~C~~~f~s~~~~~~H~~   21 (25)
T PF12874_consen    2 YCDICNKSFSSENSLRQHLR   21 (25)
T ss_dssp             EETTTTEEESSHHHHHHHHT
T ss_pred             CCCCCCCCcCCHHHHHHHHC
Confidence            45555555555555555544

>PF12171 zf-C2H2_jaz: Zinc-finger double-stranded RNA-binding; InterPro: IPR022755 This zinc finger is found in archaea and eukaryotes, and is approximately 30 amino acids in length

Probab=95.43  E-value=0.0049  Score=35.34  Aligned_cols=22  Identities=36%  Similarity=0.745  Sum_probs=14.7

Q ss_pred             cccccchhhcCCHHHHHHHHhh
Q psy8169          18 HMCELCYKVFESRENLMRHLKI   39 (843)
Q Consensus        18 ~~C~~C~~~f~~~~~l~~H~~~   39 (843)
                      |.|..|++.|.+...|..|+++
T Consensus         2 ~~C~~C~k~f~~~~~~~~H~~s   23 (27)
T PF12171_consen    2 FYCDACDKYFSSENQLKQHMKS   23 (27)
T ss_dssp             CBBTTTTBBBSSHHHHHCCTTS
T ss_pred             CCcccCCCCcCCHHHHHHHHcc
Confidence            5577777777777777666653

The mammalian members of this group occur multiple times along the protein, joined by flexible linkers, and are referred to as JAZ - dsRNA-binding ZF protein - zinc-fingers. The JAZ proteins are expressed in all tissues tested and localise in the nucleus, particularly the nucleolus []. JAZ preferentially binds to double-stranded (ds) RNA or RNA/DNA hybrids rather than DNA. In addition to binding double-stranded RNA, these zinc-fingers are required for nucleolar localisation. This entry represents the multiple-adjacent-C2H2 zinc finger, JAZ. ; PDB: 4DGW_A 1ZR9_A.

>PF12171 zf-C2H2_jaz: Zinc-finger double-stranded RNA-binding; InterPro: IPR022755 This zinc finger is found in archaea and eukaryotes, and is approximately 30 amino acids in length

Probab=95.26  E-value=0.01  Score=34.00  Aligned_cols=22  Identities=36%  Similarity=0.843  Sum_probs=20.8

Q ss_pred             CCCccccccccchhhhhhhhhc
Q psy8169         663 IPCTLCDKTFTRKDSLKKHIRI  684 (843)
Q Consensus       663 ~~C~~C~~~f~~~~~L~~H~~~  684 (843)
                      |.|..|++.|.+...|..|++.
T Consensus         2 ~~C~~C~k~f~~~~~~~~H~~s   23 (27)
T PF12171_consen    2 FYCDACDKYFSSENQLKQHMKS   23 (27)
T ss_dssp             CBBTTTTBBBSSHHHHHCCTTS
T ss_pred             CCcccCCCCcCCHHHHHHHHcc
Confidence            7899999999999999999975

The mammalian members of this group occur multiple times along the protein, joined by flexible linkers, and are referred to as JAZ - dsRNA-binding ZF protein - zinc-fingers. The JAZ proteins are expressed in all tissues tested and localise in the nucleus, particularly the nucleolus []. JAZ preferentially binds to double-stranded (ds) RNA or RNA/DNA hybrids rather than DNA. In addition to binding double-stranded RNA, these zinc-fingers are required for nucleolar localisation. This entry represents the multiple-adjacent-C2H2 zinc finger, JAZ. ; PDB: 4DGW_A 1ZR9_A.

>COG5048 FOG: Zn-finger [General function prediction only]

Probab=94.39  E-value=0.19  Score=54.79  Aligned_cols=57  Identities=30%  Similarity=0.595  Sum_probs=50.1

Q ss_pred             ceeecCcChhccCChHHHHHHHHHhcCCCceeccc--cchhcCChhhHHHHHHHccCCC
Q psy8169         274 VYLTCLICFKTFLTEVDLGKHMKMHMDDNQIQCRF--CNKYFSRNYNLKQHMKTCTKNV  330 (843)
Q Consensus       274 ~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~~--C~~~f~~~~~L~~H~~~h~~~~  330 (843)
                      ..+.|+.|...|.....+..|.+.|.+++++.|..  |...+.....+..|...++...
T Consensus        32 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   90 (467)
T COG5048          32 RPDSCPNCTDSFSRLEHLTRHIRSHTGEKPSQCSYSGCDKSFSRPLELSRHLRTHHNNP   90 (467)
T ss_pred             chhhcccccccccccchhhhhcccccccCCccccccccccccCCcchhhhhcccccccc
Confidence            35789999999999999999999999999999988  7788888888999988876543

>PRK04860 hypothetical protein; Provisional

Probab=94.15  E-value=0.028  Score=49.05  Aligned_cols=38  Identities=16%  Similarity=0.456  Sum_probs=34.0

Q ss_pred             eeecCcChhccCChHHHHHHHHHhcCCCceeccccchhcCCh
Q psy8169         275 YLTCLICFKTFLTEVDLGKHMKMHMDDNQIQCRFCNKYFSRN  316 (843)
Q Consensus       275 ~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~~C~~~f~~~  316 (843)
                      +|.|. |+.   ....+..|.++|.++++|.|..|+..|...
T Consensus       119 ~Y~C~-C~~---~~~~~rrH~ri~~g~~~YrC~~C~~~l~~~  156 (160)
T PRK04860        119 PYRCK-CQE---HQLTVRRHNRVVRGEAVYRCRRCGETLVFK  156 (160)
T ss_pred             EEEcC-CCC---eeCHHHHHHHHhcCCccEECCCCCceeEEe
Confidence            69998 987   778899999999999999999999988654

>KOG4173|consensus

Probab=94.03  E-value=0.035  Score=48.45  Aligned_cols=92  Identities=25%  Similarity=0.516  Sum_probs=72.2

Q ss_pred             CCceeccc--ccccccChHHHHHHHHhhccCCCCcccccccCCCCcchhhhHhhhccCCCCCCcccccccccccCChHHH
Q psy8169         444 NKIIQCHI--CLKTFAKKDSLKKHMKVFHTYISPDAIKEESGEGKPNILEVILQEGKVPNNNAIIQCRICSKTFTRKDSL  521 (843)
Q Consensus       444 ~~~~~C~~--C~~~f~~~~~L~~H~~~~H~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~L  521 (843)
                      ...|.|++  |...|.+......|+...|.                                  -.|..|.+.|++.--|
T Consensus        77 ~~~~~cqvagc~~~~d~lD~~E~hY~~~h~----------------------------------~sCs~C~r~~Pt~hLL  122 (253)
T KOG4173|consen   77 VPAFACQVAGCCQVFDALDDYEHHYHTLHG----------------------------------NSCSFCKRAFPTGHLL  122 (253)
T ss_pred             cccccccccchHHHHhhhhhHHHhhhhccc----------------------------------chhHHHHHhCCchhhh
Confidence            34588987  99999999999999877675                                  3699999999999999


Q ss_pred             HHHHhhhccccCcchhhhhhhhhhhhhhhHHHHhhcccCCCCCccc--ccccccccchHHHHHHHHHhhcc
Q psy8169         522 RKHMRRFHIINDTNVKKEFTEGQINRNMLDVILKESGHEIKSRIPC--ELCYKTFTRKDSLRKHMKIFHTR  590 (843)
Q Consensus       522 ~~H~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C--~~C~~~f~~~~~L~~H~~~~H~~  590 (843)
                      ..|+...|-.                  +--+..+.|   ..-|.|  .-|+-.|.+...-+.|+...|.-
T Consensus       123 d~HI~E~HDs------------------~Fqa~veRG---~dMy~ClvEgCt~KFkT~r~RkdH~I~~Hk~  172 (253)
T KOG4173|consen  123 DAHILEWHDS------------------LFQALVERG---QDMYQCLVEGCTEKFKTSRDRKDHMIRMHKY  172 (253)
T ss_pred             hHHHHHHHHH------------------HHHHHHHcC---ccHHHHHHHhhhhhhhhhhhhhhHHHHhccC
Confidence            9999887731                  001111222   456889  66999999999999999888874

>PF12013 DUF3505: Protein of unknown function (DUF3505); InterPro: IPR022698 This family of proteins is functionally uncharacterised

Probab=93.90  E-value=0.051  Score=44.61  Aligned_cols=86  Identities=14%  Similarity=0.240  Sum_probs=50.9

Q ss_pred             ccccchhhhhhhHHHHhhhhhhhcCCCCCCc---chhhhhcCC--cceeeeeecCCCCCCCC---ccccchhh----chh
Q psy8169         713 IRCELCDKSFTRKDSLKKHNRIFHGGADPKV---MDEQMARGS--ADFLEVVLNEDGEGEPV---SITNEILC----KIC  780 (843)
Q Consensus       713 ~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~---~~~~~~~~~--~~~~~~~~~~~~~~~~~---~~~~~~~C----~~C  780 (843)
                      ..|..|+.+... +.+..|++..|.......   +........  ...............++   ....+|.|    ..|
T Consensus        12 lIC~~C~~av~~-~~v~~HL~~~H~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~p~~~~~Pi~gLp~~~G~~C~~~~~~C   90 (109)
T PF12013_consen   12 LICRQCQYAVQP-SEVESHLRKRHHILKSQERQRIVEAIRQWPDLLPDPDDLQIPPDPSPPIPGLPVYDGYRCQCDPPHC   90 (109)
T ss_pred             EEeCCCCcccCc-hHHHHHHHHhcccccHHHHHHHHHHHHhhhhcccCccccCCCCCCCCcCCCCCCCCCeeeecCCCCC
Confidence            679999999876 899999996665332211   111111100  00000111111111111   12256999    999


Q ss_pred             hhhhhhhhhHHHHHhHhhc
Q psy8169         781 NRTFTRNYNLKKHMKTVHK  799 (843)
Q Consensus       781 ~~~F~~~~~L~~H~~~~H~  799 (843)
                      ++.+++...+..|++.+|+
T Consensus        91 ~y~~~~~~~m~~H~~~~Hg  109 (109)
T PF12013_consen   91 GYITRSKKTMRKHWRKEHG  109 (109)
T ss_pred             CcEeccHHHHHHHHHHhcC
Confidence            9999999999999999996

This protein is found in eukaryotes. Proteins in this family are typically between 247 to 1018 amino acids in length. This region contains two segments that are likely to be C2H2 zinc binding domains.

>PRK04860 hypothetical protein; Provisional

Probab=93.65  E-value=0.036  Score=48.44  Aligned_cols=39  Identities=15%  Similarity=0.586  Sum_probs=32.9

Q ss_pred             CcccccccccccCCHHHHHHhHHhhccCCCceeCCCCCCcccch
Q psy8169          46 KRFKCEQCDKRFSSNAELNKHSSAIHQRLKLHECDLCGKNFSQR   89 (843)
Q Consensus        46 ~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~C~~C~~~f~~~   89 (843)
                      -+|.|. |+.   ....+.+|. ++|.+.++|.|..|+..|...
T Consensus       118 ~~Y~C~-C~~---~~~~~rrH~-ri~~g~~~YrC~~C~~~l~~~  156 (160)
T PRK04860        118 FPYRCK-CQE---HQLTVRRHN-RVVRGEAVYRCRRCGETLVFK  156 (160)
T ss_pred             EEEEcC-CCC---eeCHHHHHH-HHhcCCccEECCCCCceeEEe
Confidence            468998 987   667889997 789999999999999988654

>PF13913 zf-C2HC_2: zinc-finger of a C2HC-type

Probab=93.39  E-value=0.048  Score=30.40  Aligned_cols=21  Identities=43%  Similarity=1.096  Sum_probs=18.4

Q ss_pred             CCCccccccccchhhhhhhhhc
Q psy8169         663 IPCTLCDKTFTRKDSLKKHIRI  684 (843)
Q Consensus       663 ~~C~~C~~~f~~~~~L~~H~~~  684 (843)
                      .+|+.||..| ....|..|+..
T Consensus         3 ~~C~~CgR~F-~~~~l~~H~~~   23 (25)
T PF13913_consen    3 VPCPICGRKF-NPDRLEKHEKI   23 (25)
T ss_pred             CcCCCCCCEE-CHHHHHHHHHh
Confidence            6799999999 88889999764

>COG4049 Uncharacterized protein containing archaeal-type C2H2 Zn-finger [General function prediction only]

Probab=93.34  E-value=0.046  Score=36.04  Aligned_cols=32  Identities=19%  Similarity=0.336  Sum_probs=29.2

Q ss_pred             hhhchhhhhhhhhhhHHHHHhHhhccCCCCce
Q psy8169         775 ILCKICNRTFTRNYNLKKHMKTVHKIDDNEPY  806 (843)
Q Consensus       775 ~~C~~C~~~F~~~~~L~~H~~~~H~~~~~~~~  806 (843)
                      +.|+.||..|.....+.+|...-|+...+.|.
T Consensus        18 lrCPRC~~~FR~~K~Y~RHVNKaH~~~~~r~k   49 (65)
T COG4049          18 LRCPRCGMVFRRRKDYIRHVNKAHGWLFGRGK   49 (65)
T ss_pred             eeCCchhHHHHHhHHHHHHhhHHhhhhhcCCc
Confidence            88999999999999999999999998776664

>PF12013 DUF3505: Protein of unknown function (DUF3505); InterPro: IPR022698 This family of proteins is functionally uncharacterised

Probab=93.17  E-value=0.16  Score=41.64  Aligned_cols=84  Identities=20%  Similarity=0.371  Sum_probs=50.1

Q ss_pred             cccccccccccCChHHHHHHHhhhccccCcchhhhhhhhh-----hhhhhhHHHHh------hcccCCCCCccc----cc
Q psy8169         505 IIQCRICSKTFTRKDSLRKHMRRFHIINDTNVKKEFTEGQ-----INRNMLDVILK------ESGHEIKSRIPC----EL  569 (843)
Q Consensus       505 ~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~~~~~~~~~-----~~~~~~~~~~~------~~~~~~~~~~~C----~~  569 (843)
                      ...|..|+..... +.+..|++..|..........+....     +.....+....      ..+-.....|.|    ..
T Consensus        11 vlIC~~C~~av~~-~~v~~HL~~~H~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~p~~~~~Pi~gLp~~~G~~C~~~~~~   89 (109)
T PF12013_consen   11 VLICRQCQYAVQP-SEVESHLRKRHHILKSQERQRIVEAIRQWPDLLPDPDDLQIPPDPSPPIPGLPVYDGYRCQCDPPH   89 (109)
T ss_pred             EEEeCCCCcccCc-hHHHHHHHHhcccccHHHHHHHHHHHHhhhhcccCccccCCCCCCCCcCCCCCCCCCeeeecCCCC
Confidence            3789999998776 88999999666543222111111110     00000000000      001111245899    99


Q ss_pred             ccccccchHHHHHHHHHhhc
Q psy8169         570 CYKTFTRKDSLRKHMKIFHT  589 (843)
Q Consensus       570 C~~~f~~~~~L~~H~~~~H~  589 (843)
                      |++.+.+...|+.|++.+|+
T Consensus        90 C~y~~~~~~~m~~H~~~~Hg  109 (109)
T PF12013_consen   90 CGYITRSKKTMRKHWRKEHG  109 (109)
T ss_pred             CCcEeccHHHHHHHHHHhcC
Confidence            99999999999999998774

This protein is found in eukaryotes. Proteins in this family are typically between 247 to 1018 amino acids in length. This region contains two segments that are likely to be C2H2 zinc binding domains.

>PF13913 zf-C2HC_2: zinc-finger of a C2HC-type

Probab=92.57  E-value=0.11  Score=28.94  Aligned_cols=21  Identities=33%  Similarity=0.683  Sum_probs=13.7

Q ss_pred             cccccchhhcCCHHHHHHHHhh
Q psy8169          18 HMCELCYKVFESRENLMRHLKI   39 (843)
Q Consensus        18 ~~C~~C~~~f~~~~~l~~H~~~   39 (843)
                      ..|++|++.| ...+|.+|+.+
T Consensus         3 ~~C~~CgR~F-~~~~l~~H~~~   23 (25)
T PF13913_consen    3 VPCPICGRKF-NPDRLEKHEKI   23 (25)
T ss_pred             CcCCCCCCEE-CHHHHHHHHHh
Confidence            4577777777 56666677653

>smart00451 ZnF_U1 U1-like zinc finger

Probab=92.07  E-value=0.068  Score=32.98  Aligned_cols=23  Identities=39%  Similarity=0.817  Sum_probs=21.0

Q ss_pred             hhhchhhhhhhhhhhHHHHHhHh
Q psy8169         775 ILCKICNRTFTRNYNLKKHMKTV  797 (843)
Q Consensus       775 ~~C~~C~~~F~~~~~L~~H~~~~  797 (843)
                      |.|++|+..|.....+..|++..
T Consensus         4 ~~C~~C~~~~~~~~~~~~H~~gk   26 (35)
T smart00451        4 FYCKLCNVTFTDEISVEAHLKGK   26 (35)
T ss_pred             eEccccCCccCCHHHHHHHHChH
Confidence            88999999999999999998754

Family of C2H2-type zinc fingers, present in matrin, U1 small nuclear ribonucleoprotein C and other RNA-binding proteins.

>smart00451 ZnF_U1 U1-like zinc finger

Probab=91.97  E-value=0.12  Score=31.79  Aligned_cols=22  Identities=32%  Similarity=0.661  Sum_probs=12.7

Q ss_pred             ccccccchhhcCCHHHHHHHHh
Q psy8169          17 NHMCELCYKVFESRENLMRHLK   38 (843)
Q Consensus        17 ~~~C~~C~~~f~~~~~l~~H~~   38 (843)
                      +|.|.+|++.|.+..++..|++
T Consensus         3 ~~~C~~C~~~~~~~~~~~~H~~   24 (35)
T smart00451        3 GFYCKLCNVTFTDEISVEAHLK   24 (35)
T ss_pred             CeEccccCCccCCHHHHHHHHC
Confidence            4556666666665655555553

Family of C2H2-type zinc fingers, present in matrin, U1 small nuclear ribonucleoprotein C and other RNA-binding proteins.

>COG5048 FOG: Zn-finger [General function prediction only]

Probab=91.56  E-value=0.036  Score=60.58  Aligned_cols=47  Identities=30%  Similarity=0.564  Sum_probs=24.9

Q ss_pred             ccccccCHHHHHHHHhhcCCCc---ccccchhHhhcCHHHHHHHHhhccC
Q psy8169         160 CSKVLATSHSLKRHLLIHNGPK---YTCEICAKEFTRVYELNIHKKLHED  206 (843)
Q Consensus       160 C~~~f~~~~~l~~H~~~h~~~~---~~C~~C~~~f~~~~~L~~H~~~h~~  206 (843)
                      |...+.....+..|...|....   +.+..|...+.....|..|++.|..
T Consensus       394 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  443 (467)
T COG5048         394 CIRNFKRDSNLSLHIITHLSFRPYNCKNPPCSKSFNRHYNLIPHKKIHTN  443 (467)
T ss_pred             hhhhhccccccccccccccccCCcCCCCCcchhhccCccccccccccccc
Confidence            4445555555555554444322   5555566666666666666655544

>KOG2893|consensus

Probab=91.41  E-value=0.051  Score=48.60  Aligned_cols=48  Identities=25%  Similarity=0.538  Sum_probs=43.2

Q ss_pred             CCccccccccchhhhhhhhhccccCCCCCCccchhhcccccccccccccccccchhhhhhhHHHHhhhhhhhcC
Q psy8169         664 PCTLCDKTFTRKDSLKKHIRIFHTQNQPQHTNVIEVALGARANAAFIDRIRCELCDKSFTRKDSLKKHNRIFHG  737 (843)
Q Consensus       664 ~C~~C~~~f~~~~~L~~H~~~~H~~~~p~~~~~~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~L~~H~~~~H~  737 (843)
                      .|=+|++.|....-|.+|++..|                          |+|.+|.+...+--.|..|....|.
T Consensus        12 wcwycnrefddekiliqhqkakh--------------------------fkchichkkl~sgpglsihcmqvhk   59 (341)
T KOG2893|consen   12 WCWYCNREFDDEKILIQHQKAKH--------------------------FKCHICHKKLFSGPGLSIHCMQVHK   59 (341)
T ss_pred             eeeecccccchhhhhhhhhhhcc--------------------------ceeeeehhhhccCCCceeehhhhhh
Confidence            49999999999999999999866                          9999999998888889999777775

>KOG2893|consensus

Probab=91.39  E-value=0.056  Score=48.36  Aligned_cols=48  Identities=29%  Similarity=0.569  Sum_probs=43.7

Q ss_pred             ecccccccccChHHHHHHHHhhccCCCCcccccccCCCCcchhhhHhhhccCCCCCCcccccccccccCChHHHHHHHhh
Q psy8169         448 QCHICLKTFAKKDSLKKHMKVFHTYISPDAIKEESGEGKPNILEVILQEGKVPNNNAIIQCRICSKTFTRKDSLRKHMRR  527 (843)
Q Consensus       448 ~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~L~~H~~~  527 (843)
                      .|=+|++.|....-|.+|.+..|                                   |+|.+|.+...+--.|..|.-.
T Consensus        12 wcwycnrefddekiliqhqkakh-----------------------------------fkchichkkl~sgpglsihcmq   56 (341)
T KOG2893|consen   12 WCWYCNREFDDEKILIQHQKAKH-----------------------------------FKCHICHKKLFSGPGLSIHCMQ   56 (341)
T ss_pred             eeeecccccchhhhhhhhhhhcc-----------------------------------ceeeeehhhhccCCCceeehhh
Confidence            49999999999999999998866                                   9999999999999999999887


Q ss_pred             hcc
Q psy8169         528 FHI  530 (843)
Q Consensus       528 ~H~  530 (843)
                      +|.
T Consensus        57 vhk   59 (341)
T KOG2893|consen   57 VHK   59 (341)
T ss_pred             hhh
Confidence            785

>COG4049 Uncharacterized protein containing archaeal-type C2H2 Zn-finger [General function prediction only]

Probab=88.49  E-value=0.2  Score=33.21  Aligned_cols=27  Identities=30%  Similarity=0.540  Sum_probs=17.2

Q ss_pred             cCCCCccccccchhhcCCHHHHHHHHh
Q psy8169          12 HEYVENHMCELCYKVFESRENLMRHLK   38 (843)
Q Consensus        12 h~~~~~~~C~~C~~~f~~~~~l~~H~~   38 (843)
                      -.|+..++||-|+..|.....+.+|..
T Consensus        12 RDGE~~lrCPRC~~~FR~~K~Y~RHVN   38 (65)
T COG4049          12 RDGEEFLRCPRCGMVFRRRKDYIRHVN   38 (65)
T ss_pred             cCCceeeeCCchhHHHHHhHHHHHHhh
Confidence            345666666666666666666666664

>TIGR00622 ssl1 transcription factor ssl1

Probab=86.76  E-value=1.1  Score=36.08  Aligned_cols=21  Identities=14%  Similarity=0.365  Sum_probs=12.7

Q ss_pred             CcccccccccccCCHHHHHHh
Q psy8169          46 KRFKCEQCDKRFSSNAELNKH   66 (843)
Q Consensus        46 ~~~~C~~C~~~f~~~~~l~~H   66 (843)
                      -|..|+.|+-+.-+...|.+-
T Consensus        14 LP~~CpiCgLtLVss~HLARS   34 (112)
T TIGR00622        14 LPVECPICGLTLILSTHLARS   34 (112)
T ss_pred             CCCcCCcCCCEEeccchHHHh
Confidence            456666666666655555553

This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).

>cd00350 rubredoxin_like Rubredoxin_like; nonheme iron binding domain containing a [Fe(SCys)4] center

Probab=83.32  E-value=0.66  Score=28.05  Aligned_cols=24  Identities=21%  Similarity=0.501  Sum_probs=14.8

Q ss_pred             eecCcChhccCChHHHHHHHHHhcCCCceeccccch
Q psy8169         276 LTCLICFKTFLTEVDLGKHMKMHMDDNQIQCRFCNK  311 (843)
Q Consensus       276 ~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~~C~~  311 (843)
                      |.|.+||..+....            .++.|+.|+.
T Consensus         2 ~~C~~CGy~y~~~~------------~~~~CP~Cg~   25 (33)
T cd00350           2 YVCPVCGYIYDGEE------------APWVCPVCGA   25 (33)
T ss_pred             EECCCCCCEECCCc------------CCCcCcCCCC
Confidence            56777776654322            5667777764

The family includes rubredoxins, a small electron transfer protein, and a slightly smaller modular rubredoxin domain present in rubrerythrin and nigerythrin and detected either N- or C-terminal to such proteins as flavin reductase, NAD(P)H-nitrite reductase, and ferredoxin-thioredoxin reductase. In rubredoxin, the iron atom is coordinated by four cysteine residues (Fe(S-Cys)4), but iron can also be replaced by cobalt, nickel or zinc and believed to be involved in electron transfer. Rubrerythrins and nigerythrins are small homodimeric proteins, generally consisting of 2 domains: a rubredoxin domain C-terminal to a non-sulfur, oxo-bridged diiron site in the N-terminal rubrerythrin domain. Rubrerythrins and nigerythrins have putative peroxide activity.

>PHA00626 hypothetical protein

Probab=83.21  E-value=0.38  Score=32.19  Aligned_cols=13  Identities=15%  Similarity=0.319  Sum_probs=11.6

Q ss_pred             ccccchhhhhhhH
Q psy8169         713 IRCELCDKSFTRK  725 (843)
Q Consensus       713 ~~C~~C~~~f~~~  725 (843)
                      |+|+.||+.|+.-
T Consensus        24 YkCkdCGY~ft~~   36 (59)
T PHA00626         24 YVCCDCGYNDSKD   36 (59)
T ss_pred             eEcCCCCCeechh
Confidence            9999999999864

>PF02892 zf-BED: BED zinc finger; InterPro: IPR003656 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=82.56  E-value=0.58  Score=30.86  Aligned_cols=24  Identities=38%  Similarity=0.751  Sum_probs=18.0

Q ss_pred             hhhchhhhhhhhh----hhHHHHHhHhh
Q psy8169         775 ILCKICNRTFTRN----YNLKKHMKTVH  798 (843)
Q Consensus       775 ~~C~~C~~~F~~~----~~L~~H~~~~H  798 (843)
                      .+|.+|++.+...    ++|.+|++..|
T Consensus        17 a~C~~C~~~~~~~~~~ts~l~~HL~~~h   44 (45)
T PF02892_consen   17 AKCKYCGKVIKYSSGGTSNLKRHLKKKH   44 (45)
T ss_dssp             EEETTTTEE-----SSTHHHHHHHHHTT
T ss_pred             EEeCCCCeEEeeCCCcHHHHHHhhhhhC
Confidence            6799999999874    89999998776

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. This entry represents predicted BED-type zinc finger domains. The BED finger which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain []. Some proteins known to contain a BED domain include animal, plant and fungi AC1 and Hobo-like transposases; Caenorhabditis elegans Dpy-20 protein, a predicted cuticular gene transcriptional regulator; Drosophila BEAF (boundary element-associated factor), thought to be involved in chromatin insulation; Drosophila DREF, a transcriptional regulator for S-phase genes; and tobacco 3AF1 and tomato E4/E8-BP1, light- and ethylene-regulated DNA binding proteins that contain two BED fingers. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0003677 DNA binding; PDB: 2DJR_A 2CT5_A.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	843
2i13_A	190	Aart, A Six Finger Zinc Finger Designed To Recogniz		9e-16
2i13_A	190	Aart, A Six Finger Zinc Finger Designed To Recogniz		8e-13
2i13_A	190	Aart, A Six Finger Zinc Finger Designed To Recogniz		2e-04
2kmk_A	82	Gfi-1 Zinc Fingers 3-5 Complexed With Dna Length =		1e-08
2kmk_A	82	Gfi-1 Zinc Fingers 3-5 Complexed With Dna Length =		5e-07
1mey_C	87	Crystal Structure Of A Designed Zinc Finger Protein		3e-08
2yt9_A	95	Solution Structure Of C2h2 Type Zinc Finger Domain		1e-07
2dmd_A	96	Solution Structure Of The N-Terminal C2h2 Type Zinc		3e-06
1a1h_A	90	Qgsr (Zif268 Variant) Zinc Finger-Dna Complex (Gcac		4e-06
1a1f_A	90	Dsnr (Zif268 Variant) Zinc Finger-Dna Complex (Gacc		4e-06
1ubd_C	124	Co-Crystal Structure Of Human Yy1 Zinc Finger Domai		6e-06
1g2f_C	90	Structure Of A Cys2his2 Zinc FingerTATA BOX COMPLEX		1e-05
1aay_A	90	Zif268 Zinc Finger-Dna Complex Length = 90		1e-05
1p47_A	87	Crystal Structure Of Tandem Zif268 Molecules Comple		1e-05
1a1i_A	90	Radr (Zif268 Variant) Zinc Finger-Dna Complex (Gcac		1e-05
1zaa_C	87	Zinc Finger-Dna Recognition: Crystal Structure Of A		2e-05
1g2d_C	90	Structure Of A Cys2his2 Zinc FingerTATA BOX COMPLEX		2e-05
2jp9_A	119	Structure Of The Wilms Tumor Suppressor Protein Zin		2e-05
1jk1_A	90	Zif268 D20a Mutant Bound To Wt Dna Site Length = 90		2e-05
2dlq_A	124	Solution Structure Of The Tandem Four Zf-C2h2 Domai		4e-05
2cot_A	77	Solution Structure Of The First And Second Zf-C2h2		7e-05
2ee8_A	106	Solution Structure Of Three Zf-C2h2 Domains From Mo		7e-05
2csh_A	110	Solution Structure Of Tandem Repeat Of The Zf-C2h2		1e-04
2ebt_A	100	Solution Structure Of Three Tandem Repeats Of Zf-C2		6e-04

>pdb|2I13|A Chain A, Aart, A Six Finger Zinc Finger Designed To Recognize Ann Triplets Length = 190

Iteration: 1
 Score = 82.4 bits (202), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 59/187 (31%), Positives = 82/187 (43%), Gaps = 27/187 (14%)
Query: 46  KRFKCEQCDKRFSSNAELNKHSSAIHQRLKLHECDLCGKNFSQRNNLKRQANGSNVNNRF 105
           K + C +C K FS +  L +H    H   K ++C  CGK+FS + +L R           
Sbjct: 20  KPYACPECGKSFSRSDHLAEHQR-THTGEKPYKCPECGKSFSDKKDLTRHQR-------- 70
Query: 106 SSNAELNKHSSAIHQRLKLHECDLCGKNFSQRNNLKRHLEEVHRTDGMKFECYVCSKVLA 165
                        H   K ++C  CGK+FSQR NL+ H +  H T    + C  C K  +
Sbjct: 71  ------------THTGEKPYKCPECGKSFSQRANLRAH-QRTH-TGEKPYACPECGKSFS 116
Query: 166 TSHSLKRHLLIHNGPK-YTCEICAKEFTRVYELNIHKKLHEDESVANQLKCEFCGKVFLK 224
               L+ H   H G K Y C  C K F+R   L+ H++ H  E      KC  CGK F +
Sbjct: 117 QLAHLRAHQRTHTGEKPYKCPECGKSFSREDNLHTHQRTHTGE---KPYKCPECGKSFSR 173
Query: 225 KSNLKAH 231
           +  L  H
Sbjct: 174 RDALNVH 180

>pdb|2I13|A Chain A, Aart, A Six Finger Zinc Finger Designed To Recognize Ann Triplets Length = 190

Iteration: 1
 Score = 72.8 bits (177), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 59/222 (26%), Positives = 90/222 (40%), Gaps = 43/222 (19%)
Query: 105 FSSNAELNKHSSAIHQRLKLHECDLCGKNFSQRNNLKRHLEEVHRTDGMKFECYVCSKVL 164
           F S++ + +  +A+    K + C  CGK+FS+ ++L  H +  H T    ++C  C K  
Sbjct: 4   FGSSSSVAQ--AALEPGEKPYACPECGKSFSRSDHLAEH-QRTH-TGEKPYKCPECGKSF 59
Query: 165 ATSHSLKRHLLIHNGPK-YTCEICAKEFTRVYELNIHKKLHEDESVANQLKCEFCGKVFL 223
           +    L RH   H G K Y C  C K F++   L  H++ H  E       C  CGK F 
Sbjct: 60  SDKKDLTRHQRTHTGEKPYKCPECGKSFSQRANLRAHQRTHTGE---KPYACPECGKSFS 116
Query: 224 KKSNLKAHIENNHLDYSCLECKAVGEEISFDXXXXXXXXXXXXXXXVISNVYLTCLICFK 283
           + ++L+AH   +            GE+                           C  C K
Sbjct: 117 QLAHLRAHQRTH-----------TGEKP------------------------YKCPECGK 141
Query: 284 TFLTEVDLGKHMKMHMDDNQIQCRFCNKYFSRNYNLKQHMKT 325
           +F  E +L  H + H  +   +C  C K FSR   L  H +T
Sbjct: 142 SFSREDNLHTHQRTHTGEKPYKCPECGKSFSRRDALNVHQRT 183

>pdb|2I13|A Chain A, Aart, A Six Finger Zinc Finger Designed To Recognize Ann Triplets Length = 190

Iteration: 1
 Score = 45.1 bits (105), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 58/250 (23%), Positives = 88/250 (35%), Gaps = 72/250 (28%)
Query: 488 NILEVILQEGKVPNNNAIIQCRICSKTFTRKDSLRKHMRRFHIINDTNVKKEFTEGQINR 547
           ++ +  L+ G+ P       C  C K+F+R D L +H R  H         E   G+   
Sbjct: 9   SVAQAALEPGEKP-----YACPECGKSFSRSDHLAEHQR-THTGEKPYKCPEC--GKSFS 60
Query: 548 NMLDVILKESGHEIKSRIPCELCYKTFTRKDSLRKHMKIFHTRRNPSANSGNSGTSAPPA 607
           +  D+   +  H  +    C  C K+F+++ +LR H +  HT   P A            
Sbjct: 61  DKKDLTRHQRTHTGEKPYKCPECGKSFSQRANLRAHQRT-HTGEKPYA------------ 107
Query: 608 VKLEQNGGEKVENSTSVENSTSVENSTSVENSANVENTSSVDNRTSVGPVAPIDRIPCTL 667
                                  E   S    A++        RT  G   P     C  
Sbjct: 108 ---------------------CPECGKSFSQLAHLR----AHQRTHTG-EKPYK---CPE 138
Query: 668 CDKTFTRKDSLKKHIRIFHTQNQPQHTNVIEVALGARANAAFIDRIRCELCDKSFTRKDS 727
           C K+F+R+D+L  H R  HT  +P                      +C  C KSF+R+D+
Sbjct: 139 CGKSFSREDNLHTHQRT-HTGEKP---------------------YKCPECGKSFSRRDA 176
Query: 728 LKKHNRIFHG 737
           L  H R   G
Sbjct: 177 LNVHQRTHTG 186

>pdb|2KMK|A Chain A, Gfi-1 Zinc Fingers 3-5 Complexed With Dna Length = 82

Iteration: 1
 Score = 58.9 bits (141), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 30/73 (41%), Positives = 44/73 (60%), Gaps = 3/73 (4%)
Query: 20 CELCYKVFESRENLMRHLKIHDDKESKRFKCEQCDKRFSSNAELNKHSSAIHQRLKLHEC 79
          C++C K F+    L  HL IH D  ++ + C+ C KRF   +++ KH + IH   K H+C
Sbjct: 4  CKICGKSFKRSSTLSTHLLIHSD--TRPYPCQYCGKRFHQKSDMKKH-TFIHTGEKPHKC 60
Query: 80 DLCGKNFSQRNNL 92
           +CGK FSQ +NL
Sbjct: 61 QVCGKAFSQSSNL 73

>pdb|2KMK|A Chain A, Gfi-1 Zinc Fingers 3-5 Complexed With Dna Length = 82

Iteration: 1
 Score = 53.5 bits (127), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 29/78 (37%), Positives = 41/78 (52%), Gaps = 4/78 (5%)
Query: 155 FECYVCSKVLATSHSLKRHLLIHNGPK-YTCEICAKEFTRVYELNIHKKLHEDESVANQL 213
           F+C +C K    S +L  HLLIH+  + Y C+ C K F +  ++  H  +H  E      
Sbjct: 2   FDCKICGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHTFIHTGE---KPH 58
Query: 214 KCEFCGKVFLKKSNLKAH 231
           KC+ CGK F + SNL  H
Sbjct: 59  KCQVCGKAFSQSSNLITH 76

>pdb|1MEY|C Chain C, Crystal Structure Of A Designed Zinc Finger Protein Bound To Dna Length = 87

Iteration: 1
 Score = 57.8 bits (138), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 31/86 (36%), Positives = 50/86 (58%), Gaps = 3/86 (3%)
Query: 123 KLHECDLCGKNFSQRNNLKRHLEEVHRTDGMKFECYVCSKVLATSHSLKRHLLIHNGPK- 181
           K ++C  CGK+FSQ +NL++H +  H T    ++C  C K  + S  L++H   H G K 
Sbjct: 3   KPYKCPECGKSFSQSSNLQKH-QRTH-TGEKPYKCPECGKSFSQSSDLQKHQRTHTGEKP 60
Query: 182 YTCEICAKEFTRVYELNIHKKLHEDE 207
           Y C  C K F+R   L+ H++ H+++
Sbjct: 61  YKCPECGKSFSRSDHLSRHQRTHQNK 86

>pdb|2YT9|A Chain A, Solution Structure Of C2h2 Type Zinc Finger Domain 345 In Zinc Finger Protein 278 Length = 95

Iteration: 1
 Score = 55.5 bits (132), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 29/81 (35%), Positives = 42/81 (51%), Gaps = 2/81 (2%)
Query: 157 CYVCSKVLATSHSLKRHLLIHNGPK-YTCEICAKEFTRVYELNIHKKLHEDESVANQLKC 215
           C +C K+    + L RH L H+G K Y+C +C   F R   ++ H + H D SV     C
Sbjct: 10  CEICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVRSH-DGSVGKPYIC 68
Query: 216 EFCGKVFLKKSNLKAHIENNH 236
           + CGK F +  +L  HI+  H
Sbjct: 69  QSCGKGFSRPDHLNGHIKQVH 89

>pdb|2DMD|A Chain A, Solution Structure Of The N-Terminal C2h2 Type Zinc-Binding Domain Of The Zinc Finger Protein 64, Isoforms 1 And 2 Length = 96

Iteration: 1
 Score = 50.8 bits (120), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 29/85 (34%), Positives = 47/85 (55%), Gaps = 3/85 (3%)
Query: 125 HECDLCGKNFSQRNNLKRHLEEVHRTDGMKFECYVCSKVLATSHSLKRHLLIHNGPK-YT 183
           H+C++CGK FS+++ LK H+   H T    ++C  C    A S SL +HL IH+  + + 
Sbjct: 9   HKCEVCGKCFSRKDKLKTHM-RCH-TGVKPYKCKTCDYAAADSSSLNKHLRIHSDERPFK 66
Query: 184 CEICAKEFTRVYELNIHKKLHEDES 208
           C+IC        +L +H + H  +S
Sbjct: 67  CQICPYASRNSSQLTVHLRSHTGDS 91

>pdb|1A1H|A Chain A, Qgsr (Zif268 Variant) Zinc Finger-Dna Complex (Gcac Site) Length = 90

Iteration: 1
 Score = 50.4 bits (119), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 27/76 (35%), Positives = 41/76 (53%), Gaps = 3/76 (3%)
Query: 130 CGKNFSQRNNLKRHLEEVHRTDGMKFECYVCSKVLATSHSLKRHLLIHNGPK-YTCEICA 188
           C + FSQ  +L RH+  +H T    F+C +C +  + S  L  H+  H G K + C+IC 
Sbjct: 12  CDRRFSQSGSLTRHIR-IH-TGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICG 69
Query: 189 KEFTRVYELNIHKKLH 204
           ++F R  E   H K+H
Sbjct: 70  RKFARSDERKRHTKIH 85

>pdb|1A1F|A Chain A, Dsnr (Zif268 Variant) Zinc Finger-Dna Complex (Gacc Site) Length = 90

Iteration: 1
 Score = 50.4 bits (119), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 27/76 (35%), Positives = 41/76 (53%), Gaps = 3/76 (3%)
Query: 130 CGKNFSQRNNLKRHLEEVHRTDGMKFECYVCSKVLATSHSLKRHLLIHNGPK-YTCEICA 188
           C + FS  +NL RH+  +H T    F+C +C +  + S  L  H+  H G K + C+IC 
Sbjct: 12  CDRRFSDSSNLTRHIR-IH-TGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICG 69
Query: 189 KEFTRVYELNIHKKLH 204
           ++F R  E   H K+H
Sbjct: 70  RKFARSDERKRHTKIH 85

>pdb|1UBD|C Chain C, Co-Crystal Structure Of Human Yy1 Zinc Finger Domain Bound To The Adeno-Associated Virus P5 Initiator Element Length = 124

Iteration: 1
 Score = 50.1 bits (118), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 37/109 (33%), Positives = 52/109 (47%), Gaps = 13/109 (11%)
Query: 130 CGKNFSQRNNLKRHLEEVHRTDGMKFE-CYVCSKVLATSHSLKRHLLIHNGPK-YTC--E 185
           C K F   + +++HL     T G +   C  C K    S  LKRH L+H G K + C  E
Sbjct: 13  CTKMFRDNSAMRKHLH----THGPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFE 68
Query: 186 ICAKEFTRVYELNIHKKLHEDESVANQLKCEF--CGKVFLKKSNLKAHI 232
            C K F+  + L  H ++H  +       C F  C K F + +NLK+HI
Sbjct: 69  GCGKRFSLDFNLRTHVRIHTGD---RPYVCPFDGCNKKFAQSTNLKSHI 114

>pdb|1G2F|C Chain C, Structure Of A Cys2his2 Zinc FingerTATA BOX COMPLEX (Tatazf;clone #6) Length = 90

Iteration: 1
 Score = 48.9 bits (115), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 25/76 (32%), Positives = 41/76 (53%), Gaps = 3/76 (3%)
Query: 130 CGKNFSQRNNLKRHLEEVHRTDGMKFECYVCSKVLATSHSLKRHLLIHNGPK-YTCEICA 188
           C + FSQ+ NL  H+  +H T    F+C +C +  +   SL  H+  H G K + C+IC 
Sbjct: 12  CDRRFSQKTNLDTHIR-IH-TGQKPFQCRICMRNFSQQASLNAHIRTHTGEKPFACDICG 69
Query: 189 KEFTRVYELNIHKKLH 204
           ++F  ++    H K+H
Sbjct: 70  RKFATLHTRTRHTKIH 85

>pdb|1AAY|A Chain A, Zif268 Zinc Finger-Dna Complex Length = 90

Iteration: 1
 Score = 48.9 bits (115), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 26/76 (34%), Positives = 41/76 (53%), Gaps = 3/76 (3%)
Query: 130 CGKNFSQRNNLKRHLEEVHRTDGMKFECYVCSKVLATSHSLKRHLLIHNGPK-YTCEICA 188
           C + FS+ + L RH+  +H T    F+C +C +  + S  L  H+  H G K + C+IC 
Sbjct: 12  CDRRFSRSDELTRHIR-IH-TGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICG 69
Query: 189 KEFTRVYELNIHKKLH 204
           ++F R  E   H K+H
Sbjct: 70  RKFARSDERKRHTKIH 85

>pdb|1P47|A Chain A, Crystal Structure Of Tandem Zif268 Molecules Complexed To Dna Length = 87

Iteration: 1
 Score = 48.5 bits (114), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 26/76 (34%), Positives = 41/76 (53%), Gaps = 3/76 (3%)
Query: 130 CGKNFSQRNNLKRHLEEVHRTDGMKFECYVCSKVLATSHSLKRHLLIHNGPK-YTCEICA 188
           C + FS+ + L RH+  +H T    F+C +C +  + S  L  H+  H G K + C+IC 
Sbjct: 11  CDRRFSRSDELTRHIR-IH-TGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICG 68
Query: 189 KEFTRVYELNIHKKLH 204
           ++F R  E   H K+H
Sbjct: 69  RKFARSDERKRHTKIH 84

>pdb|1A1I|A Chain A, Radr (Zif268 Variant) Zinc Finger-Dna Complex (Gcac Site) Length = 90

Iteration: 1
 Score = 48.5 bits (114), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 26/76 (34%), Positives = 41/76 (53%), Gaps = 3/76 (3%)
Query: 130 CGKNFSQRNNLKRHLEEVHRTDGMKFECYVCSKVLATSHSLKRHLLIHNGPK-YTCEICA 188
           C + FS+  +L RH+  +H T    F+C +C +  + S  L  H+  H G K + C+IC 
Sbjct: 12  CDRRFSRSADLTRHIR-IH-TGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICG 69
Query: 189 KEFTRVYELNIHKKLH 204
           ++F R  E   H K+H
Sbjct: 70  RKFARSDERKRHTKIH 85

>pdb|1ZAA|C Chain C, Zinc Finger-Dna Recognition: Crystal Structure Of A Zif268- Dna Complex At 2.1 Angstroms Length = 87

Iteration: 1
 Score = 48.1 bits (113), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 26/76 (34%), Positives = 41/76 (53%), Gaps = 3/76 (3%)
Query: 130 CGKNFSQRNNLKRHLEEVHRTDGMKFECYVCSKVLATSHSLKRHLLIHNGPK-YTCEICA 188
           C + FS+ + L RH+  +H T    F+C +C +  + S  L  H+  H G K + C+IC 
Sbjct: 12  CDRRFSRSDELTRHIR-IH-TGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICG 69
Query: 189 KEFTRVYELNIHKKLH 204
           ++F R  E   H K+H
Sbjct: 70  RKFARSDERKRHTKIH 85

>pdb|1G2D|C Chain C, Structure Of A Cys2his2 Zinc FingerTATA BOX COMPLEX (CLONE #2) Length = 90

Iteration: 1
 Score = 48.1 bits (113), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 24/76 (31%), Positives = 42/76 (55%), Gaps = 3/76 (3%)
Query: 130 CGKNFSQRNNLKRHLEEVHRTDGMKFECYVCSKVLATSHSLKRHLLIHNGPK-YTCEICA 188
           C + FSQ+ NL  H+  +H T    F+C +C +  +    L +H+  H G K + C+IC 
Sbjct: 12  CDRRFSQKTNLDTHIR-IH-TGQKPFQCRICMRNFSQHTGLNQHIRTHTGEKPFACDICG 69
Query: 189 KEFTRVYELNIHKKLH 204
           ++F  ++  + H K+H
Sbjct: 70  RKFATLHTRDRHTKIH 85

>pdb|2JP9|A Chain A, Structure Of The Wilms Tumor Suppressor Protein Zinc Finger Domain Bound To Dna Length = 119

Iteration: 1
 Score = 47.8 bits (112), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 38/111 (34%), Positives = 53/111 (47%), Gaps = 10/111 (9%)
Query: 100 NVNNRFSSNAELNKHSSAIHQRLKLHECDL--CGKNFSQRNNLKRHLEEVHRTDGMK-FE 156
             N R+   + L  HS   H   K ++CD   C + FS+ + LKRH     R  G+K F+
Sbjct: 13  GCNKRYFKLSHLQMHSRK-HTGEKPYQCDFKDCERRFSRSDQLKRHQR---RHTGVKPFQ 68
Query: 157 CYVCSKVLATSHSLKRHLLIHNGPK-YTCEI--CAKEFTRVYELNIHKKLH 204
           C  C +  + S  LK H   H G K ++C    C K+F R  EL  H  +H
Sbjct: 69  CKTCQRKFSRSDHLKTHTRTHTGEKPFSCRWPSCQKKFARSDELVRHHNMH 119

>pdb|1JK1|A Chain A, Zif268 D20a Mutant Bound To Wt Dna Site Length = 90

Iteration: 1
 Score = 47.8 bits (112), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 26/76 (34%), Positives = 40/76 (52%), Gaps = 3/76 (3%)
Query: 130 CGKNFSQRNNLKRHLEEVHRTDGMKFECYVCSKVLATSHSLKRHLLIHNGPK-YTCEICA 188
           C + FS+   L RH+  +H T    F+C +C +  + S  L  H+  H G K + C+IC 
Sbjct: 12  CDRRFSRSAELTRHIR-IH-TGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICG 69
Query: 189 KEFTRVYELNIHKKLH 204
           ++F R  E   H K+H
Sbjct: 70  RKFARSDERKRHTKIH 85

>pdb|2DLQ|A Chain A, Solution Structure Of The Tandem Four Zf-C2h2 Domain Repeats Of Murine Gli-Kruppel Family Member Hkr3 Length = 124

Iteration: 1
 Score = 47.4 bits (111), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 35/140 (25%), Positives = 56/140 (40%), Gaps = 35/140 (25%)
Query: 184 CEICAKEFTRVYELNIHKKLHEDESVANQLKCEFCGKVFLKKSNLKAHIENNHLDYSCLE 243
           C  C K+F   Y L +H + H  E      +C  CGK + +K NL  H   N ++ S   
Sbjct: 10  CPTCHKKFLSKYYLKVHNRKHTGE---KPFECPKCGKCYFRKENLLEHEARNCMNRS--- 63
Query: 244 CKAVGEEISFDXXXXXXXXXXXXXXXVISNVYLTCLICFKTFLTEVDLGKHMKMHMDDNQ 303
                E++                         TC +C +TF   ++L  HM  H  +  
Sbjct: 64  -----EQV------------------------FTCSVCQETFRRRMELRLHMVSHTGEMP 94
Query: 304 IQCRFCNKYFSRNYNLKQHM 323
            +C  C++ F +  +L+ HM
Sbjct: 95  YKCSSCSQQFMQKKDLQSHM 114

>pdb|2COT|A Chain A, Solution Structure Of The First And Second Zf-C2h2 Domain Of Zinc Finger Protein 435 Length = 77

Iteration: 1
 Score = 46.2 bits (108), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 22/50 (44%), Positives = 35/50 (70%), Gaps = 1/50 (2%)
Query: 43 KESKRFKCEQCDKRFSSNAELNKHSSAIHQRLKLHECDLCGKNFSQRNNL 92
          +E +R+KC++C K FS +++L+KH    H   K ++CD CGK F QR++L
Sbjct: 14 RERRRYKCDECGKSFSHSSDLSKH-RRTHTGEKPYKCDECGKAFIQRSHL 62

>pdb|2EE8|A Chain A, Solution Structure Of Three Zf-C2h2 Domains From Mouse Protein Odd-Skipped-Related 2 Splicing Isoform 2 Length = 106

Iteration: 1
 Score = 46.2 bits (108), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 29/83 (34%), Positives = 41/83 (49%), Gaps = 3/83 (3%)
Query: 127 CDLCGKNFSQRNNLKRHLEEVHRTDGMKFECYVCSKVLATSHSLKRHLLIHNGPK-YTCE 185
           C  CG++F++  NL  H E  H TD   + C +C K       L+ H  IH+  K + C+
Sbjct: 20  CKFCGRHFTKSYNLLIH-ERTH-TDERPYTCDICHKAFRRQDHLRDHRYIHSKEKPFKCQ 77
Query: 186 ICAKEFTRVYELNIHKKLHEDES 208
            C K F +   L +HK LH   S
Sbjct: 78  ECGKGFCQSRTLAVHKTLHMQTS 100

>pdb|2CSH|A Chain A, Solution Structure Of Tandem Repeat Of The Zf-C2h2 Domains Of Human Zinc Finger Protein 297b Length = 110

Iteration: 1
 Score = 45.4 bits (106), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 29/71 (40%), Positives = 40/71 (56%), Gaps = 6/71 (8%)
Query: 123 KLHECDLCGKNFSQRNNLKRHLEEVHRTDGMK-FECYVCSKVLATSHSLKRHLLIHNGPK 181
           KL+ C  CGK+F+ ++   RH+  +H   G++ + C VC K     H L  H+ IH G K
Sbjct: 9   KLYPCQ-CGKSFTHKSQRDRHMS-MHL--GLRPYGCGVCGKKFKMKHHLVGHMKIHTGIK 64
Query: 182 -YTCEICAKEF 191
            Y C ICAK F
Sbjct: 65  PYECNICAKRF 75

>pdb|2EBT|A Chain A, Solution Structure Of Three Tandem Repeats Of Zf-C2h2 Domains From Human Kruppel-Like Factor 5 Length = 100

Iteration: 1
 Score = 43.1 bits (100), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 24/77 (31%), Positives = 41/77 (53%), Gaps = 3/77 (3%)
Query: 18 HMCEL--CYKVFESRENLMRHLKIHDDKESKRFKCEQCDKRFSSNAELNKHSSAIHQRLK 75
          H C+   C KV+    +L  HL+ H  ++  +   E CD RF+ + EL +H    H   K
Sbjct: 16 HYCDYPGCTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRFARSDELTRHYRK-HTGAK 74
Query: 76 LHECDLCGKNFSQRNNL 92
            +C +C ++FS+ ++L
Sbjct: 75 PFQCGVCNRSFSRSDHL 91

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	843
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	6e-28
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	7e-26
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	1e-22
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	1e-17
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	4e-04
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	5e-04
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	5e-20
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	7e-15
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	2e-11
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	3e-08
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	2e-05
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	2e-05
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	3e-05
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	9e-04
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	2e-18
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	1e-16
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	1e-16
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	4e-16
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	3e-08
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	1e-06
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	2e-06
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	1e-05
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	9e-05
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	2e-04
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	2e-18
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	6e-15
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	3e-13
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	2e-08
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	3e-07
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	3e-07
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	3e-06
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	3e-05
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	8e-05
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	8e-04
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	8e-18
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	6e-17
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	3e-15
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	4e-15
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	2e-04
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	5e-04
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	1e-15
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	1e-14
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	6e-14
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	4e-08
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	4e-05
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	5e-05
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	1e-14
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	2e-13
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	2e-12
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	3e-14
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	2e-13
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	1e-07
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	4e-07
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	1e-06
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	4e-06
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	2e-05
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	3e-05
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	7e-05
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	4e-04
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	5e-14
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	3e-13
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	1e-11
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	1e-11
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	2e-11
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	4e-08
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	3e-06
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	7e-05
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	7e-14
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	3e-13
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	4e-12
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	4e-11
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	2e-08
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	4e-04
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	7e-14
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	1e-12
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	2e-11
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	3e-08
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	1e-07
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	8e-07
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	2e-06
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	5e-05
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	7e-14
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	1e-12
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	6e-12
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	7e-12
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	2e-07
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	3e-04
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	8e-14
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	9e-13
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	1e-11
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	6e-11
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	2e-10
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	7e-09
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	2e-07
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	2e-06
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	1e-05
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	2e-05
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	1e-04
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	2e-13
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	3e-10
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	8e-10
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	5e-08
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	5e-08
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	6e-08
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	5e-06
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	9e-05
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	5e-13
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	4e-11
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	9e-10
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	1e-09
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	1e-09
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	1e-09
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	8e-09
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	1e-08
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	9e-08
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	3e-05
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	6e-13
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	1e-09
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	1e-09
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	7e-09
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	5e-08
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	3e-06
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	6e-05
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	1e-04
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	2e-12
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	2e-12
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	5e-11
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	9e-10
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	2e-09
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	3e-05
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	4e-04
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	4e-12
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	5e-12
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	2e-11
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	4e-10
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	6e-10
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	9e-10
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	2e-09
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	1e-08
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	1e-06
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	2e-06
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	5e-05
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	2e-11
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	2e-10
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	2e-09
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	3e-09
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	4e-06
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	1e-04
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	4e-04
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	6e-04
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	3e-10
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	1e-07
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	8e-07
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	1e-06
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	2e-04
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	4e-10
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	2e-09
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	2e-09
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	3e-09
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	2e-08
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	9e-08
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	3e-07
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	4e-06
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	5e-06
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	3e-05
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	1e-04
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	1e-09
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	2e-08
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	2e-06
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	4e-06
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	4e-06
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	2e-04
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	2e-09
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	3e-08
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	8e-08
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	1e-07
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	2e-05
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	2e-05
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	5e-09
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	2e-07
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	2e-07
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	4e-07
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	8e-06
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	4e-05
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	4e-05
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	5e-09
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	2e-07
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	7e-07
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	6e-04
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	9e-09
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	1e-08
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	3e-07
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	7e-07
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	4e-06
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	1e-05
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	5e-05
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	9e-05
2wbt_A	129	B-129; zinc finger; 2.70A {Sulfolobus virus 1} Len	9e-09
2wbt_A	129	B-129; zinc finger; 2.70A {Sulfolobus virus 1} Len	2e-04
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	3e-08
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	8e-08
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	1e-06
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	2e-06
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	4e-06
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	2e-05
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	3e-05
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	4e-08
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	3e-07
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	6e-07
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	2e-06
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	6e-05
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	2e-04
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	9e-08
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	1e-07
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	2e-07
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	4e-05
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	5e-05
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	6e-05
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	7e-05
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	8e-05
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	1e-04
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	3e-04
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	1e-07
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	2e-05
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	7e-05
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	2e-07
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	2e-05
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	6e-05
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	6e-07
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	4e-06
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	8e-05
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	5e-06
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	8e-06
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	9e-06
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	1e-05
2epa_A	72	Krueppel-like factor 10; transforming growth facto	3e-05
2epa_A	72	Krueppel-like factor 10; transforming growth facto	9e-05
2epa_A	72	Krueppel-like factor 10; transforming growth facto	1e-04
2epa_A	72	Krueppel-like factor 10; transforming growth facto	4e-04
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	5e-05
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	2e-04
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	1e-04
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	2e-04
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	3e-04
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	3e-04
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	5e-04
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	6e-04
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	6e-04
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	8e-04
1p7a_A	37	BF3, BKLF, kruppel-like factor 3; classical zinc f	9e-04
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	9e-04

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C* Length = 190

 Score =  110 bits (278), Expect = 6e-28
 Identities = 64/216 (29%), Positives = 89/216 (41%), Gaps = 49/216 (22%)

Query: 27  FESRENLMRHLKIHDDKESKRFKCEQCDKRFSSNAELNKHSSAIHQRL----KLHECDLC 82
                + +    +   +  K + C +C K FS +  L     A HQR     K ++C  C
Sbjct: 3   EFGSSSSVAQAALEPGE--KPYACPECGKSFSRSDHL-----AEHQRTHTGEKPYKCPEC 55

Query: 83  GKNFSQRNNLKRQANGSNVNNRFSSNAELNKHSSAIHQRL----KLHECDLCGKNFSQRN 138
           GK+FS + +L                          HQR     K ++C  CGK+FSQR 
Sbjct: 56  GKSFSDKKDL------------------------TRHQRTHTGEKPYKCPECGKSFSQRA 91

Query: 139 NLKRHLEEVHRT-DGMK-FECYVCSKVLATSHSLKRHLLIHNGPK-YTCEICAKEFTRVY 195
           NL+ H     RT  G K + C  C K  +    L+ H   H G K Y C  C K F+R  
Sbjct: 92  NLRAH----QRTHTGEKPYACPECGKSFSQLAHLRAHQRTHTGEKPYKCPECGKSFSRED 147

Query: 196 ELNIHKKLHEDESVANQLKCEFCGKVFLKKSNLKAH 231
            L+ H++ H  E      KC  CGK F ++  L  H
Sbjct: 148 NLHTHQRTHTGE---KPYKCPECGKSFSRRDALNVH 180

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C* Length = 190

 Score =  104 bits (262), Expect = 7e-26
 Identities = 64/196 (32%), Positives = 86/196 (43%), Gaps = 46/196 (23%)

Query: 20  CELCYKVFESRENLMRHLKIHDDKESKRFKCEQCDKRFSSNAELNKHSSAIHQRL----K 75
           C  C K F   ++L  H + H  +  K +KC +C K FS   +L       HQR     K
Sbjct: 24  CPECGKSFSRSDHLAEHQRTHTGE--KPYKCPECGKSFSDKKDL-----TRHQRTHTGEK 76

Query: 76  LHECDLCGKNFSQRNNLKRQANGSNVNNRFSSNAELNKHSSAIHQRL----KLHECDLCG 131
            ++C  CGK+FSQR NL                          HQR     K + C  CG
Sbjct: 77  PYKCPECGKSFSQRANL------------------------RAHQRTHTGEKPYACPECG 112

Query: 132 KNFSQRNNLKRHLEEVHRT-DGMK-FECYVCSKVLATSHSLKRHLLIHNGPK-YTCEICA 188
           K+FSQ  +L+ H     RT  G K ++C  C K  +   +L  H   H G K Y C  C 
Sbjct: 113 KSFSQLAHLRAH----QRTHTGEKPYKCPECGKSFSREDNLHTHQRTHTGEKPYKCPECG 168

Query: 189 KEFTRVYELNIHKKLH 204
           K F+R   LN+H++ H
Sbjct: 169 KSFSRRDALNVHQRTH 184

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C* Length = 190

 Score = 95.2 bits (238), Expect = 1e-22
 Identities = 65/217 (29%), Positives = 92/217 (42%), Gaps = 55/217 (25%)

Query: 66  HSS--AIHQRL----KLHECDLCGKNFSQRNNLKRQANGSNVNNRFSSNAELNKHSSAIH 119
            SS       L    K + C  CGK+FS+ ++L                        A H
Sbjct: 5   GSSSSVAQAALEPGEKPYACPECGKSFSRSDHL------------------------AEH 40

Query: 120 QRL----KLHECDLCGKNFSQRNNLKRHLEEVHRT-DGMK-FECYVCSKVLATSHSLKRH 173
           QR     K ++C  CGK+FS + +L RH     RT  G K ++C  C K  +   +L+ H
Sbjct: 41  QRTHTGEKPYKCPECGKSFSDKKDLTRH----QRTHTGEKPYKCPECGKSFSQRANLRAH 96

Query: 174 LLIHNGPK-YTCEICAKEFTRVYELNIHKKLHEDESVANQLKCEFCGKVFLKKSNLKAHI 232
              H G K Y C  C K F+++  L  H++ H  E      KC  CGK F ++ NL  H 
Sbjct: 97  QRTHTGEKPYACPECGKSFSQLAHLRAHQRTHTGE---KPYKCPECGKSFSREDNLHTH- 152

Query: 233 ENNHLD---YSCLEC-KAVGEEISFDTKKNLLLHLKT 265
           +  H     Y C EC K+      F  +  L +H +T
Sbjct: 153 QRTHTGEKPYKCPECGKS------FSRRDALNVHQRT 183

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C* Length = 190

 Score = 81.0 bits (201), Expect = 1e-17
 Identities = 62/224 (27%), Positives = 85/224 (37%), Gaps = 57/224 (25%)

Query: 114 HSS--AIHQRL----KLHECDLCGKNFSQRNNLKRHLEEVHRT-DGMK-FECYVCSKVLA 165
            SS       L    K + C  CGK+FS+ ++L  H     RT  G K ++C  C K  +
Sbjct: 5   GSSSSVAQAALEPGEKPYACPECGKSFSRSDHLAEH----QRTHTGEKPYKCPECGKSFS 60

Query: 166 TSHSLKRHLLIHNGPK-YTCEICAKEFTRVYELNIHKKLHEDESVANQLKCEFCGKVFLK 224
               L RH   H G K Y C  C K F++   L  H++ H  E       C  CGK F +
Sbjct: 61  DKKDLTRHQRTHTGEKPYKCPECGKSFSQRANLRAHQRTHTGE---KPYACPECGKSFSQ 117

Query: 225 KSNLKAHIENNHLD---YSCLECKAVGEEISFDTKKNLLLHLKTKHKNVISNVYLTCLIC 281
            ++L+AH +  H     Y C EC                                     
Sbjct: 118 LAHLRAH-QRTHTGEKPYKCPECG------------------------------------ 140

Query: 282 FKTFLTEVDLGKHMKMHMDDNQIQCRFCNKYFSRNYNLKQHMKT 325
            K+F  E +L  H + H  +   +C  C K FSR   L  H +T
Sbjct: 141 -KSFSREDNLHTHQRTHTGEKPYKCPECGKSFSRRDALNVHQRT 183

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C* Length = 190

 Score = 41.3 bits (98), Expect = 4e-04
 Identities = 31/132 (23%), Positives = 44/132 (33%), Gaps = 56/132 (42%)

Query: 665 CTLCDKTFTRKDSLKKHIRIFHTQNQPQHTNVIEVALGARANAAFIDRIRCELCDKSFTR 724
           C  C K+F+R D L +H R  HT  +P                      +C  C KSF+ 
Sbjct: 24  CPECGKSFSRSDHLAEHQRT-HTGEKP---------------------YKCPECGKSFSD 61

Query: 725 KDSLKKHNRIFHGGADPKVMDEQMARGSADFLEVVLNEDGEGEPVSITNEILCKICNRTF 784
           K  L +H R  H G  P                                   C  C ++F
Sbjct: 62  KKDLTRHQRT-HTGEKPYK---------------------------------CPECGKSF 87

Query: 785 TRNYNLKKHMKT 796
           ++  NL+ H +T
Sbjct: 88  SQRANLRAHQRT 99

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C* Length = 190

 Score = 40.9 bits (97), Expect = 5e-04
 Identities = 22/70 (31%), Positives = 31/70 (44%), Gaps = 22/70 (31%)

Query: 665 CTLCDKTFTRKDSLKKHIRIFHTQNQPQHTNVIEVALGARANAAFIDRIRCELCDKSFTR 724
           C  C K+F+R+D+L  H R  HT  +P                      +C  C KSF+R
Sbjct: 136 CPECGKSFSREDNLHTHQRT-HTGEKP---------------------YKCPECGKSFSR 173

Query: 725 KDSLKKHNRI 734
           +D+L  H R 
Sbjct: 174 RDALNVHQRT 183

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 155

 Score = 86.5 bits (215), Expect = 5e-20
 Identities = 43/180 (23%), Positives = 65/180 (36%), Gaps = 49/180 (27%)

Query: 46  KRFKCEQCDKRFSSNAELNKHSSA--IHQRLKLHECDLCG-----KNFSQRNNLKRQANG 98
              + + C + F S  +L  H ++  IH   K   C   G     + F  +  L      
Sbjct: 2   TDCRWDGCSQEFDSQEQLVHHINSEHIHGERKEFVCHWGGCSRELRPFKAQYMLV----- 56

Query: 99  SNVNNRFSSNAELNKHSSAIHQRL----KLHECDL--CGKNFSQRNNLKRHLEEVHRT-D 151
                              +H R     K H+C    C K++S+  NLK HL    R+  
Sbjct: 57  -------------------VHMRRHTGEKPHKCTFEGCRKSYSRLENLKTHL----RSHT 93

Query: 152 GMK-FEC--YVCSKVLATSHSLKRHLL-IHNGPK-YTCEI--CAKEFTRVYELNIHKKLH 204
           G K + C    CSK  + +    +H    H+  K Y C++  C K +T    L  H K  
Sbjct: 94  GEKPYMCEHEGCSKAFSNASDRAKHQNRTHSNEKPYVCKLPGCTKRYTDPSSLRKHVKTV 153

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 155

 Score = 71.9 bits (177), Expect = 7e-15
 Identities = 38/154 (24%), Positives = 55/154 (35%), Gaps = 20/154 (12%)

Query: 126 ECDLCGKNFSQRNNLKRHLEEVHRTDGMK-FECYVC-----SKVLATSHSLKRHLLIHNG 179
             D C + F  +  L  H+   H     K F C+        +     + L  H+  H G
Sbjct: 5   RWDGCSQEFDSQEQLVHHINSEHIHGERKEFVCHWGGCSRELRPFKAQYMLVVHMRRHTG 64

Query: 180 PK-YTCEI--CAKEFTRVYELNIHKKLHEDESVANQLKCEF--CGKVFLKKSNLKAHIEN 234
            K + C    C K ++R+  L  H + H  E       CE   C K F   S+   H   
Sbjct: 65  EKPHKCTFEGCRKSYSRLENLKTHLRSHTGE---KPYMCEHEGCSKAFSNASDRAKHQNR 121

Query: 235 NHLD---YSCLECKAVGEEISFDTKKNLLLHLKT 265
            H +   Y    CK  G    +    +L  H+KT
Sbjct: 122 THSNEKPY---VCKLPGCTKRYTDPSSLRKHVKT 152

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 155

 Score = 62.2 bits (152), Expect = 2e-11
 Identities = 31/134 (23%), Positives = 52/134 (38%), Gaps = 36/134 (26%)

Query: 20  CELCYKVFESRENLMRHLKIHDDKESKRFKC--EQCDKRFSSNAELNKHSSAIHQRL--- 74
           C    + F+++  L+ H++ H  +  K  KC  E C K +S    L       H R    
Sbjct: 42  CSRELRPFKAQYMLVVHMRRHTGE--KPHKCTFEGCRKSYSRLENLK-----THLRSHTG 94

Query: 75  -KLHEC--DLCGKNFSQRNNLKRQANGSNVNNRFSSNAELNKHSSAIHQRLKLHECDL-- 129
            K + C  + C K FS  ++                     KH +  H   K + C L  
Sbjct: 95  EKPYMCEHEGCSKAFSNASDRA-------------------KHQNRTHSNEKPYVCKLPG 135

Query: 130 CGKNFSQRNNLKRH 143
           C K ++  ++L++H
Sbjct: 136 CTKRYTDPSSLRKH 149

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 155

 Score = 53.0 bits (128), Expect = 3e-08
 Identities = 23/119 (19%), Positives = 40/119 (33%), Gaps = 39/119 (32%)

Query: 214 KCEFCGKVFLKKSNLKAHIENNHL-----DYSCLECKAVGEEISFDTKKNLLLHLKTKHK 268
           + + C + F  +  L  HI + H+     ++ C                           
Sbjct: 5   RWDGCSQEFDSQEQLVHHINSEHIHGERKEFVCHWGG----------------------- 41

Query: 269 NVISNVYLTCLICFKTFLTEVDLGKHMKMHMDDNQIQCRF--CNKYFSRNYNLKQHMKT 325
                    C    + F  +  L  HM+ H  +   +C F  C K +SR  NLK H+++
Sbjct: 42  ---------CSRELRPFKAQYMLVVHMRRHTGEKPHKCTFEGCRKSYSRLENLKTHLRS 91

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 155

 Score = 44.5 bits (106), Expect = 2e-05
 Identities = 31/135 (22%), Positives = 46/135 (34%), Gaps = 59/135 (43%)

Query: 668 CDKTFTRKDSLKKHIRIFHTQNQPQHTNVIEVALGARANAAFIDRIRCE--LCDKSFTRK 725
           C K+++R ++LK H+R  HT  +P                       CE   C K+F+  
Sbjct: 75  CRKSYSRLENLKTHLRS-HTGEKP---------------------YMCEHEGCSKAFSNA 112

Query: 726 DSLKKHNRIFHGGADPKVMDEQMARGSADFLEVVLNEDGEGEPVSITNEILCKI--CNRT 783
               KH    H    P V                                 CK+  C + 
Sbjct: 113 SDRAKHQNRTHSNEKPYV---------------------------------CKLPGCTKR 139

Query: 784 FTRNYNLKKHMKTVH 798
           +T   +L+KH+KTVH
Sbjct: 140 YTDPSSLRKHVKTVH 154

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 155

 Score = 44.1 bits (105), Expect = 2e-05
 Identities = 24/134 (17%), Positives = 40/134 (29%), Gaps = 52/134 (38%)

Query: 665 CTLCDKTFTRKDSLKKHIRIFHTQNQPQHTNVIEVALGARANAAFIDRIRCELCDKSFTR 724
           C+   + F  +  L  H+R  HT  +P                          C KS++R
Sbjct: 42  CSRELRPFKAQYMLVVHMRR-HTGEKPHKCTFEG-------------------CRKSYSR 81

Query: 725 KDSLKKHNRIFHGGADPKVMDEQMARGSADFLEVVLNEDGEGEPVSITNEILCKICNRTF 784
            ++LK H R  H G  P + + +                                C++ F
Sbjct: 82  LENLKTHLRS-HTGEKPYMCEHEG-------------------------------CSKAF 109

Query: 785 TRNYNLKKHMKTVH 798
           +   +  KH    H
Sbjct: 110 SNASDRAKHQNRTH 123

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 155

 Score = 44.1 bits (105), Expect = 3e-05
 Identities = 34/144 (23%), Positives = 47/144 (32%), Gaps = 70/144 (48%)

Query: 452 CLKTFAKKDSLKKHMKVFHTYISPDAIKEESGEGKPNILEVILQEGKVPNNNAIIQC--R 509
           C K++++ ++LK H++  HT           GE KP                    C   
Sbjct: 75  CRKSYSRLENLKTHLRS-HT-----------GE-KP------------------YMCEHE 103

Query: 510 ICSKTFTRKDSLRKHMRRFHIINDTNVKKEFTEGQINRNMLDVILKESGHEIKSRIP--C 567
            CSK F+      KH  R H    +N K                            P  C
Sbjct: 104 GCSKAFSNASDRAKHQNRTH----SNEK----------------------------PYVC 131

Query: 568 EL--CYKTFTRKDSLRKHMKIFHT 589
           +L  C K +T   SLRKH+K    
Sbjct: 132 KLPGCTKRYTDPSSLRKHVKT-VH 154

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 155

 Score = 39.9 bits (94), Expect = 9e-04
 Identities = 16/70 (22%), Positives = 23/70 (32%), Gaps = 19/70 (27%)

Query: 668 CDKTFTRKDSLKKHIRIFHTQNQPQHTNVIEVALGARANAAFIDRIRCELCDKSFTRKDS 727
           C K F+      KH    H+  +P    +                     C K +T   S
Sbjct: 105 CSKAFSNASDRAKHQNRTHSNEKPYVCKLPG-------------------CTKRYTDPSS 145

Query: 728 LKKHNRIFHG 737
           L+KH +  HG
Sbjct: 146 LRKHVKTVHG 155

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 124

 Score = 81.0 bits (201), Expect = 2e-18
 Identities = 28/135 (20%), Positives = 55/135 (40%), Gaps = 32/135 (23%)

Query: 20  CELCYKVFESRENLMRHLKIHDDKESKRFKCEQCDKRFSSNAELNKH--SSAIHQRLKLH 77
           C  C+K F S+  L  H + H  +  K F+C +C K +     L +H   + +++  ++ 
Sbjct: 10  CPTCHKKFLSKYYLKVHNRKHTGE--KPFECPKCGKCYFRKENLLEHEARNCMNRSEQVF 67

Query: 78  ECDLCGKNFSQRNNLKRQANGSNVNNRFSSNAELNKHSSAIHQRL----KLHECDLCGKN 133
            C +C + F +R  L                         +H         ++C  C + 
Sbjct: 68  TCSVCQETFRRRMEL------------------------RLHMVSHTGEMPYKCSSCSQQ 103

Query: 134 FSQRNNLKRHLEEVH 148
           F Q+ +L+ H+ ++H
Sbjct: 104 FMQKKDLQSHMIKLH 118

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 124

 Score = 75.6 bits (187), Expect = 1e-16
 Identities = 32/141 (22%), Positives = 58/141 (41%), Gaps = 29/141 (20%)

Query: 46  KRFKCEQCDKRFSSNAELNKHSSAIHQRLKLHECDLCGKNFSQRNNLKRQANGSNVNNRF 105
              +C  C K+F S   L  H+   H   K  EC  CGK + ++ N              
Sbjct: 6   SGVECPTCHKKFLSKYYLKVHNR-KHTGEKPFECPKCGKCYFRKEN-------------- 50

Query: 106 SSNAELNKH--SSAIHQRLKLHECDLCGKNFSQRNNLKRHLEEVHRT-DGMK-FECYVCS 161
                L +H   + +++  ++  C +C + F +R  L+ H      +  G   ++C  CS
Sbjct: 51  -----LLEHEARNCMNRSEQVFTCSVCQETFRRRMELRLH----MVSHTGEMPYKCSSCS 101

Query: 162 KVLATSHSLKRHLL-IHNGPK 181
           +       L+ H++ +H+GP 
Sbjct: 102 QQFMQKKDLQSHMIKLHSGPS 122

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 124

 Score = 75.6 bits (187), Expect = 1e-16
 Identities = 32/136 (23%), Positives = 49/136 (36%), Gaps = 34/136 (25%)

Query: 75  KLHECDLCGKNFSQRNNLKRQANGSNVNNRFSSNAELNKHSSAIHQRL----KLHECDLC 130
              EC  C K F  +  L                         +H R     K  EC  C
Sbjct: 6   SGVECPTCHKKFLSKYYL------------------------KVHNRKHTGEKPFECPKC 41

Query: 131 GKNFSQRNNLKRH--LEEVHRTDGMK-FECYVCSKVLATSHSLKRHLLIHNGPK-YTCEI 186
           GK + ++ NL  H     ++R    + F C VC +       L+ H++ H G   Y C  
Sbjct: 42  GKCYFRKENLLEHEARNCMNR--SEQVFTCSVCQETFRRRMELRLHMVSHTGEMPYKCSS 99

Query: 187 CAKEFTRVYELNIHKK 202
           C+++F +  +L  H  
Sbjct: 100 CSQQFMQKKDLQSHMI 115

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 124

 Score = 74.5 bits (184), Expect = 4e-16
 Identities = 35/115 (30%), Positives = 51/115 (44%), Gaps = 13/115 (11%)

Query: 123 KLHECDLCGKNFSQRNNLKRHLEEVHRT-DGMK-FECYVCSKVLATSHSLKRH---LLIH 177
              EC  C K F  +  LK H    +R   G K FEC  C K      +L  H     ++
Sbjct: 6   SGVECPTCHKKFLSKYYLKVH----NRKHTGEKPFECPKCGKCYFRKENLLEHEARNCMN 61

Query: 178 NGPK-YTCEICAKEFTRVYELNIHKKLHEDESVANQLKCEFCGKVFLKKSNLKAH 231
              + +TC +C + F R  EL +H   H  E      KC  C + F++K +L++H
Sbjct: 62  RSEQVFTCSVCQETFRRRMELRLHMVSHTGE---MPYKCSSCSQQFMQKKDLQSH 113

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 124

 Score = 51.7 bits (125), Expect = 3e-08
 Identities = 34/149 (22%), Positives = 57/149 (38%), Gaps = 36/149 (24%)

Query: 177 HNGPK-YTCEICAKEFTRVYELNIHKKLHEDESVANQLKCEFCGKVFLKKSNLKAHIENN 235
            +G     C  C K+F   Y L +H + H  E      +C  CGK + +K NL  H    
Sbjct: 2   SSGSSGVECPTCHKKFLSKYYLKVHNRKHTGE---KPFECPKCGKCYFRKENLLEH---- 54

Query: 236 HLDYSCLECKAVGEEISFDTKKNLLLHLKTKHKNVISNVYLTCLICFKTFLTEVDLGKHM 295
                               +    ++     +     V+ TC +C +TF   ++L  HM
Sbjct: 55  --------------------EARNCMN--RSEQ-----VF-TCSVCQETFRRRMELRLHM 86

Query: 296 KMHMDDNQIQCRFCNKYFSRNYNLKQHMK 324
             H  +   +C  C++ F +  +L+ HM 
Sbjct: 87  VSHTGEMPYKCSSCSQQFMQKKDLQSHMI 115

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 124

 Score = 47.1 bits (113), Expect = 1e-06
 Identities = 35/142 (24%), Positives = 50/142 (35%), Gaps = 60/142 (42%)

Query: 448 QCHICLKTFAKKDSLKKHMKVFHTYISPDAIKEESGEGKPNILEVILQEGKVPNNNAIIQ 507
           +C  C K F  K  LK H +  HT           GE KP                   +
Sbjct: 9   ECPTCHKKFLSKYYLKVHNRK-HT-----------GE-KP------------------FE 37

Query: 508 CRICSKTFTRKDSLRKHMRRFHIINDTNVKKEFTEGQINRNMLDVILKESGHEIKSRIPC 567
           C  C K + RK++L +H  R  +  + + ++ FT                         C
Sbjct: 38  CPKCGKCYFRKENLLEHEARNCM--NRS-EQVFT-------------------------C 69

Query: 568 ELCYKTFTRKDSLRKHMKIFHT 589
            +C +TF R+  LR HM   HT
Sbjct: 70  SVCQETFRRRMELRLHMVS-HT 90

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 124

 Score = 46.3 bits (111), Expect = 2e-06
 Identities = 24/136 (17%), Positives = 40/136 (29%), Gaps = 57/136 (41%)

Query: 665 CTLCDKTFTRKDSLKKHIRIF--HTQNQPQHTNVIEVALGARANAAFIDRIRCELCDKSF 722
           C  C K + RK++L +H      +   Q                        C +C ++F
Sbjct: 38  CPKCGKCYFRKENLLEHEARNCMNRSEQV---------------------FTCSVCQETF 76

Query: 723 TRKDSLKKHNRIFHGGADPKVMDEQMARGSADFLEVVLNEDGEGEPVSITNEILCKICNR 782
            R+  L+ H    H G  P                                   C  C++
Sbjct: 77  RRRMELRLHMVS-HTGEMPYK---------------------------------CSSCSQ 102

Query: 783 TFTRNYNLKKHMKTVH 798
            F +  +L+ HM  +H
Sbjct: 103 QFMQKKDLQSHMIKLH 118

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 124

 Score = 44.0 bits (105), Expect = 1e-05
 Identities = 27/134 (20%), Positives = 36/134 (26%), Gaps = 57/134 (42%)

Query: 665 CTLCDKTFTRKDSLKKHIRIFHTQNQPQHTNVIEVALGARANAAFIDRIRCELCDKSFTR 724
           C  C K F  K  LK H R  HT  +P                       C  C K + R
Sbjct: 10  CPTCHKKFLSKYYLKVHNRK-HTGEKP---------------------FECPKCGKCYFR 47

Query: 725 KDSLKKHNRIF--HGGADPKVMDEQMARGSADFLEVVLNEDGEGEPVSITNEILCKICNR 782
           K++L +H      +                                        C +C  
Sbjct: 48  KENLLEHEARNCMNRSEQVFT---------------------------------CSVCQE 74

Query: 783 TFTRNYNLKKHMKT 796
           TF R   L+ HM +
Sbjct: 75  TFRRRMELRLHMVS 88

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 124

 Score = 41.7 bits (99), Expect = 9e-05
 Identities = 18/74 (24%), Positives = 28/74 (37%), Gaps = 22/74 (29%)

Query: 665 CTLCDKTFTRKDSLKKHIRIFHTQNQPQHTNVIEVALGARANAAFIDRIRCELCDKSFTR 724
           C++C +TF R+  L+ H+   HT   P                      +C  C + F +
Sbjct: 69  CSVCQETFRRRMELRLHMVS-HTGEMP---------------------YKCSSCSQQFMQ 106

Query: 725 KDSLKKHNRIFHGG 738
           K  L+ H    H G
Sbjct: 107 KKDLQSHMIKLHSG 120

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 124

 Score = 41.0 bits (97), Expect = 2e-04
 Identities = 21/81 (25%), Positives = 31/81 (38%), Gaps = 31/81 (38%)

Query: 449 CHICLKTFAKKDSLKKHMKVFHTYISPDAIKEESGEGKPNILEVILQEGKVPNNNAIIQC 508
           C +C +TF ++  L+ HM   HT           GE  P                   +C
Sbjct: 69  CSVCQETFRRRMELRLHMVS-HT-----------GE-MP------------------YKC 97

Query: 509 RICSKTFTRKDSLRKHMRRFH 529
             CS+ F +K  L+ HM + H
Sbjct: 98  SSCSQQFMQKKDLQSHMIKLH 118

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens} Length = 155

 Score = 81.6 bits (202), Expect = 2e-18
 Identities = 40/181 (22%), Positives = 59/181 (32%), Gaps = 49/181 (27%)

Query: 23  CYKVFESRENLMRHLKIHDDKESKRFKCEQCDKRFSSNAELNKHSSAIH--------QRL 74
                +  +  +    I + +       + CD+ FS+  EL  H +  H           
Sbjct: 3   SGSSGQPIKQELSCKWIDEAQ--LSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVC 60

Query: 75  KLHECDLCGKNFSQRNNLKRQANGSNVNNRFSSNAELNKHSSAIHQRL----KLHECDL- 129
              EC   GK+F  +  L                          H R+    K   C   
Sbjct: 61  YWEECPREGKSFKAKYKLV------------------------NHIRVHTGEKPFPCPFP 96

Query: 130 -CGKNFSQRNNLKRHLEEVHRT-DGMK-FECYV--CSKVLATSHSLKRHLLIHNGPK-YT 183
            CGK F++  NLK H     RT  G K F+C    C +  A S   K+H+ +H   K   
Sbjct: 97  GCGKIFARSENLKIHK----RTHTGEKPFKCEFEGCDRRFANSSDRKKHMHVHTSDKSGP 152

Query: 184 C 184
            
Sbjct: 153 S 153

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens} Length = 155

 Score = 71.9 bits (177), Expect = 6e-15
 Identities = 38/141 (26%), Positives = 51/141 (36%), Gaps = 17/141 (12%)

Query: 105 FSSNAELNKHSSA--IHQRLKLHECDLCGKNFSQRNNLKRHLEEVH-------RTDGMKF 155
            SS   + +  S   I +         C + FS  + L  H+   H              
Sbjct: 4   GSSGQPIKQELSCKWIDEAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWE 63

Query: 156 ECYVCSKVLATSHSLKRHLLIHNGPK-YTCEI--CAKEFTRVYELNIHKKLHEDESVANQ 212
           EC    K     + L  H+ +H G K + C    C K F R   L IHK+ H  E     
Sbjct: 64  ECPREGKSFKAKYKLVNHIRVHTGEKPFPCPFPGCGKIFARSENLKIHKRTHTGE---KP 120

Query: 213 LKCEF--CGKVFLKKSNLKAH 231
            KCEF  C + F   S+ K H
Sbjct: 121 FKCEFEGCDRRFANSSDRKKH 141

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens} Length = 155

 Score = 67.3 bits (165), Expect = 3e-13
 Identities = 28/139 (20%), Positives = 51/139 (36%), Gaps = 40/139 (28%)

Query: 20  CELCYKVFESRENLMRHLKIH-------DDKESKRFKCEQCDKRFSSNAELNKHSSAIHQ 72
            + C + F +   L+ H+ +        ++      +C +  K F +  +L  H   +H 
Sbjct: 28  KKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIR-VHT 86

Query: 73  RLKLHECDL--CGKNFSQRNNLKRQANGSNVNNRFSSNAELNKHSSAIHQRL----KLHE 126
             K   C    CGK F++  NLK                        IH+R     K  +
Sbjct: 87  GEKPFPCPFPGCGKIFARSENLK------------------------IHKRTHTGEKPFK 122

Query: 127 CDL--CGKNFSQRNNLKRH 143
           C+   C + F+  ++ K+H
Sbjct: 123 CEFEGCDRRFANSSDRKKH 141

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens} Length = 155

 Score = 53.1 bits (128), Expect = 2e-08
 Identities = 34/162 (20%), Positives = 48/162 (29%), Gaps = 36/162 (22%)

Query: 160 CSKVLATSHSLKRHLLIHNGPK-YTCEICAKEFTRVYELNIHKKLH------EDESVANQ 212
                           I         + C + F+ ++EL  H  +       ++  V   
Sbjct: 3   SGSSGQPIKQELSCKWIDEAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYW 62

Query: 213 LKCEFCGKVFLKKSNLKAHI-----ENNHLDYSCLECKAVGEEISFDTKKNLLLHLKTKH 267
            +C   GK F  K  L  HI     E          C   G    F   +NL +H +T H
Sbjct: 63  EECPREGKSFKAKYKLVNHIRVHTGEKPF------PCPFPGCGKIFARSENLKIHKRT-H 115

Query: 268 KNVISNVYLT------CLI--CFKTFLTEVDLGKHMKMHMDD 301
                    T      C    C + F    D  KHM +H  D
Sbjct: 116 ---------TGEKPFKCEFEGCDRRFANSSDRKKHMHVHTSD 148

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens} Length = 155

 Score = 50.0 bits (120), Expect = 3e-07
 Identities = 25/141 (17%), Positives = 43/141 (30%), Gaps = 31/141 (21%)

Query: 187 CAKEFTRVYELNIHKKLHEDESVANQLKCEFCGKVFLKKSNLKAHIENNHLDYSCLECKA 246
                  + +    K + E +        + C + F     L  H+   H          
Sbjct: 3   SGSSGQPIKQELSCKWIDEAQ---LSRPKKSCDRTFSTMHELVTHVTMEH---------- 49

Query: 247 VGEEISFDTKKNLLLHLKTKHKNVISNVYLTCLICFKTFLTEVDLGKHMKMHMDDNQIQC 306
                                +N     +  C    K+F  +  L  H+++H  +    C
Sbjct: 50  -VG---------------GPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVHTGEKPFPC 93

Query: 307 RF--CNKYFSRNYNLKQHMKT 325
            F  C K F+R+ NLK H +T
Sbjct: 94  PFPGCGKIFARSENLKIHKRT 114

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens} Length = 155

 Score = 49.6 bits (119), Expect = 3e-07
 Identities = 28/134 (20%), Positives = 38/134 (28%), Gaps = 47/134 (35%)

Query: 664 PCTLCDKTFTRKDSLKKHIRIFHTQNQPQHTNVIEVALGARANAAFIDRIRCELCDKSFT 723
           P   CD+TF+    L  H+ +      P+  N +                 C    KSF 
Sbjct: 27  PKKSCDRTFSTMHELVTHVTM-EHVGGPEQNNHVCYWEE------------CPREGKSFK 73

Query: 724 RKDSLKKHNRIFHGGADP-KVMDEQMARGSADFLEVVLNEDGEGEPVSITNEILCKICNR 782
            K  L  H R+ H G  P                                       C +
Sbjct: 74  AKYKLVNHIRV-HTGEKPFPCPFPG--------------------------------CGK 100

Query: 783 TFTRNYNLKKHMKT 796
            F R+ NLK H +T
Sbjct: 101 IFARSENLKIHKRT 114

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens} Length = 155

 Score = 47.3 bits (113), Expect = 3e-06
 Identities = 21/93 (22%), Positives = 42/93 (45%), Gaps = 15/93 (16%)

Query: 10  KSHEYVENHMCELCYKVFESRENLMRHLKIHDDKESKRFKC--EQCDKRFSSNAELNKHS 67
           +++       C    K F+++  L+ H+++H  +  K F C    C K F+ +  L    
Sbjct: 55  QNNHVCYWEECPREGKSFKAKYKLVNHIRVHTGE--KPFPCPFPGCGKIFARSENLK--- 109

Query: 68  SAIHQRL----KLHECDL--CGKNFSQRNNLKR 94
             IH+R     K  +C+   C + F+  ++ K+
Sbjct: 110 --IHKRTHTGEKPFKCEFEGCDRRFANSSDRKK 140

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens} Length = 155

 Score = 43.8 bits (104), Expect = 3e-05
 Identities = 31/133 (23%), Positives = 39/133 (29%), Gaps = 54/133 (40%)

Query: 665 CTLCDKTFTRKDSLKKHIRIFHTQNQPQHTNVIEVALGARANAAFIDRIRCELCDKSFTR 724
           C    K+F  K  L  HIR+ HT  +P                          C K F R
Sbjct: 65  CPREGKSFKAKYKLVNHIRV-HTGEKPFPCPFPG-------------------CGKIFAR 104

Query: 725 KDSLKKHNRIFHGGADP-KVMDEQMARGSADFLEVVLNEDGEGEPVSITNEILCKICNRT 783
            ++LK H R  H G  P K   E                                 C+R 
Sbjct: 105 SENLKIHKRT-HTGEKPFKCEFEG--------------------------------CDRR 131

Query: 784 FTRNYNLKKHMKT 796
           F  + + KKHM  
Sbjct: 132 FANSSDRKKHMHV 144

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens} Length = 155

 Score = 42.7 bits (101), Expect = 8e-05
 Identities = 15/83 (18%), Positives = 24/83 (28%), Gaps = 23/83 (27%)

Query: 507 QCRICSKTFTRKDSLRKHMRRFHIINDTNVKKEFTEGQINRNMLDVILKESGHEIKSRIP 566
             + C +TF+    L  H+   H      V        +                     
Sbjct: 27  PKKSCDRTFSTMHELVTHVTMEH------VGGPEQNNHVCYWE----------------E 64

Query: 567 CELCYKTFTRKDSLRKHMKIFHT 589
           C    K+F  K  L  H+++ HT
Sbjct: 65  CPREGKSFKAKYKLVNHIRV-HT 86

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens} Length = 155

 Score = 40.0 bits (94), Expect = 8e-04
 Identities = 29/145 (20%), Positives = 40/145 (27%), Gaps = 52/145 (35%)

Query: 445 KIIQCHICLKTFAKKDSLKKHMKVFHTYISPDAIKEESGEGKPNILEVILQEGKVPNNNA 504
                  C +TF+    L  H+ + H              G      V   E        
Sbjct: 24  LSRPKKSCDRTFSTMHELVTHVTMEH------------VGGPEQNNHVCYWEE------- 64

Query: 505 IIQCRICSKTFTRKDSLRKHMRRFHIINDTNVKKEFTEGQINRNMLDVILKESGHEIKSR 564
              C    K+F  K  L  H+R  H    T  +K F                        
Sbjct: 65  ---CPREGKSFKAKYKLVNHIRV-H----TG-EKPF-----------------------P 92

Query: 565 IPCELCYKTFTRKDSLRKHMKIFHT 589
            P   C K F R ++L+ H +  HT
Sbjct: 93  CPFPGCGKIFARSENLKIHKRT-HT 116

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A Length = 190

 Score = 81.5 bits (202), Expect = 8e-18
 Identities = 48/223 (21%), Positives = 73/223 (32%), Gaps = 61/223 (27%)

Query: 71  HQRL----KLHECDL--CGKNFSQRNNLKRQANGSNVNNRFSSNAELNKHSSAIHQRL-- 122
            + L    K + C    CG  +++   L+                         H     
Sbjct: 3   EKALPVVYKRYICSFADCGAAYNKNWKLQA------------------------HLCKHT 38

Query: 123 --KLHECD--LCGKNFSQRNNLKRHLEEVHRT-DGMK-FEC--YVCSKVLATSHSLKRHL 174
             K   C    C K F+  ++L RH      T  G K F C    C     T  ++K+H 
Sbjct: 39  GEKPFPCKEEGCEKGFTSLHHLTRH----SLTHTGEKNFTCDSDGCDLRFTTKANMKKHF 94

Query: 175 LIHNGPK---YTCEI--CAKEFTRVYELNIHKKLHEDESVANQLKC--EFCGKVFLKKSN 227
              +  K   Y C    C K F +  +L +H+  H  +      +C  E C K F   S 
Sbjct: 95  NRFHNIKICVYVCHFENCGKAFKKHNQLKVHQFSHTQQ---LPYECPHEGCDKRFSLPSR 151

Query: 228 LKAH--IENNHLDYSCLECKAVGEEISFDTKKNLLLHLKTKHK 268
           LK H  +   +       C  VG+  +       L H+   H+
Sbjct: 152 LKRHEKVHAGYPCKKDDSCSFVGKTWT-----LYLKHVAECHQ 189

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A Length = 190

 Score = 78.8 bits (195), Expect = 6e-17
 Identities = 49/204 (24%), Positives = 72/204 (35%), Gaps = 53/204 (25%)

Query: 23  CYKVFESRENLMRHLKIHDDKESKRFKCEQ--CDKRFSSNAELNKHSSAIHQRLKLHECD 80
           C   +     L  HL  H  +  K F C++  C+K F+S   L +HS   H   K   CD
Sbjct: 20  CGAAYNKNWKLQAHLCKHTGE--KPFPCKEEGCEKGFTSLHHLTRHSL-THTGEKNFTCD 76

Query: 81  --LCGKNFSQRNNLKRQANGSNVNNRFSSNAELNKHSSAIHQR------LKLHECDL--C 130
              C   F+ + N+K+                        H        + ++ C    C
Sbjct: 77  SDGCDLRFTTKANMKK------------------------HFNRFHNIKICVYVCHFENC 112

Query: 131 GKNFSQRNNLKRHLEEVHRT-DGMK-FEC--YVCSKVLATSHSLKRHLLIHNGPK----Y 182
           GK F + N LK H      +      +EC    C K  +    LKRH  +H G       
Sbjct: 113 GKAFKKHNQLKVH----QFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAGYPCKKDD 168

Query: 183 TCEICAKEFTRVYELNIHKKLHED 206
           +C    K +T    L    + H+D
Sbjct: 169 SCSFVGKTWTLY--LKHVAECHQD 190

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A Length = 190

 Score = 73.8 bits (182), Expect = 3e-15
 Identities = 50/171 (29%), Positives = 67/171 (39%), Gaps = 42/171 (24%)

Query: 21  ELCYKVFESRENLMRHLKIHDDKESKRFKCEQ--CDKRFSSNAELNKHSSAIHQRLKLH- 77
           E C K F S  +L RH   H  +  K F C+   CD RF++ A + KH +     +K+  
Sbjct: 48  EGCEKGFTSLHHLTRHSLTHTGE--KNFTCDSDGCDLRFTTKANMKKHFN-RFHNIKICV 104

Query: 78  -ECDL--CGKNFSQRNNLKRQANGSNVNNRFSSNAELNKHSSAIHQRL----KLHEC--D 128
             C    CGK F + N LK                        +HQ        +EC  +
Sbjct: 105 YVCHFENCGKAFKKHNQLK------------------------VHQFSHTQQLPYECPHE 140

Query: 129 LCGKNFSQRNNLKRHLEEVHRTDGMKFECYVCSKVLAT-SHSLKRHLLIHN 178
            C K FS  + LKRH E+VH       +   CS V  T +  LK     H 
Sbjct: 141 GCDKRFSLPSRLKRH-EKVH-AGYPCKKDDSCSFVGKTWTLYLKHVAECHQ 189

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A Length = 190

 Score = 73.4 bits (181), Expect = 4e-15
 Identities = 50/225 (22%), Positives = 68/225 (30%), Gaps = 57/225 (25%)

Query: 119 HQRL----KLHECDL--CGKNFSQRNNLKRHLEEVHRT-DGMK-FEC--YVCSKVLATSH 168
            + L    K + C    CG  +++   L+ H         G K F C    C K   + H
Sbjct: 3   EKALPVVYKRYICSFADCGAAYNKNWKLQAH----LCKHTGEKPFPCKEEGCEKGFTSLH 58

Query: 169 SLKRHLLIHNGPK-YTCE--ICAKEFTRVYELNIHKKLHEDESVANQLKCEF--CGKVFL 223
            L RH L H G K +TC+   C   FT    +  H     +        C F  CGK F 
Sbjct: 59  HLTRHSLTHTGEKNFTCDSDGCDLRFTTKANMKKHFNRFHNIK-ICVYVCHFENCGKAFK 117

Query: 224 KKSNLKAH--IENNHLDYSCLECKAVGEEISFDTKKNLLLHLKTKHKNVISNVYLTCLIC 281
           K + LK H       L Y C                                       C
Sbjct: 118 KHNQLKVHQFSHTQQLPYECPHEG-----------------------------------C 142

Query: 282 FKTFLTEVDLGKHMKMHMDDNQIQCRFCNKYFSRNYNLKQHMKTC 326
            K F     L +H K+H      +   C+          +H+  C
Sbjct: 143 DKRFSLPSRLKRHEKVHAGYPCKKDDSCSFVGKTWTLYLKHVAEC 187

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A Length = 190

 Score = 42.2 bits (100), Expect = 2e-04
 Identities = 29/134 (21%), Positives = 39/134 (29%), Gaps = 58/134 (43%)

Query: 668 CDKTFTRKDSLKKHIRIFHTQNQPQHTNVIEVALGARANAAFIDRIRC--ELCDKSFTRK 725
           C K F + + LK H    HTQ  P                       C  E CDK F+  
Sbjct: 112 CGKAFKKHNQLKVHQFS-HTQQLP---------------------YECPHEGCDKRFSLP 149

Query: 726 DSLKKHNRIFHGGADPKVMDEQMARGSADFLEVVLNEDGEGEPVSITNEILCKICNRTFT 785
             LK+H ++ H G   K  D                               C    +T+T
Sbjct: 150 SRLKRHEKV-HAGYPCKKDDS------------------------------CSFVGKTWT 178

Query: 786 RNYNLKKHMKTVHK 799
                 KH+   H+
Sbjct: 179 ---LYLKHVAECHQ 189

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A Length = 190

 Score = 41.0 bits (97), Expect = 5e-04
 Identities = 19/72 (26%), Positives = 25/72 (34%), Gaps = 24/72 (33%)

Query: 668 CDKTFTRKDSLKKHIRIFHTQNQPQHTNVIEVALGARANAAFIDRIRCE--LCDKSFTRK 725
           C+K FT    L +H    HT  +                        C+   CD  FT K
Sbjct: 50  CEKGFTSLHHLTRHSLT-HTGEKN---------------------FTCDSDGCDLRFTTK 87

Query: 726 DSLKKHNRIFHG 737
            ++KKH   FH 
Sbjct: 88  ANMKKHFNRFHN 99

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A* Length = 124

 Score = 72.9 bits (180), Expect = 1e-15
 Identities = 42/153 (27%), Positives = 58/153 (37%), Gaps = 48/153 (31%)

Query: 44  ESKRFKC--EQCDKRFSSNAELNKHSSAIHQRL---KLHECDLCGKNFSQRNNLKRQANG 98
           E +   C  + C K F  N+ + KH           ++H C  CGK F + + LKR    
Sbjct: 2   EPRTIACPHKGCTKMFRDNSAMRKH-----LHTHGPRVHVCAECGKAFVESSKLKR---- 52

Query: 99  SNVNNRFSSNAELNKHSSAIHQRL----KLHECDL--CGKNFSQRNNLKRHLEEVHRT-D 151
                               HQ +    K  +C    CGK FS   NL+ H     R   
Sbjct: 53  --------------------HQLVHTGEKPFQCTFEGCGKRFSLDFNLRTH----VRIHT 88

Query: 152 GMK-FECYV--CSKVLATSHSLKRHLLIHNGPK 181
           G + + C    C+K  A S +LK H+L H   K
Sbjct: 89  GDRPYVCPFDGCNKKFAQSTNLKSHILTHAKAK 121

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A* Length = 124

 Score = 69.9 bits (172), Expect = 1e-14
 Identities = 34/142 (23%), Positives = 51/142 (35%), Gaps = 40/142 (28%)

Query: 75  KLHECDL--CGKNFSQRNNLKRQANGSNVNNRFSSNAELNKHSSAIHQRL---KLHECDL 129
           +   C    C K F   + +++                        H      ++H C  
Sbjct: 4   RTIACPHKGCTKMFRDNSAMRK------------------------HLHTHGPRVHVCAE 39

Query: 130 CGKNFSQRNNLKRHLEEVHRT-DGMK-FECYV--CSKVLATSHSLKRHLLIHNGPK-YTC 184
           CGK F + + LKRH         G K F+C    C K  +   +L+ H+ IH G + Y C
Sbjct: 40  CGKAFVESSKLKRH----QLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVC 95

Query: 185 EI--CAKEFTRVYELNIHKKLH 204
               C K+F +   L  H   H
Sbjct: 96  PFDGCNKKFAQSTNLKSHILTH 117

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A* Length = 124

 Score = 68.3 bits (168), Expect = 6e-14
 Identities = 33/136 (24%), Positives = 50/136 (36%), Gaps = 44/136 (32%)

Query: 20  CELCYKVFESRENLMRHLKIHDDKESKRFKCEQCDKRFSSNAELNKHSSAIHQRL----K 75
            + C K+F     + +HL  H  +      C +C K F  +++L +     HQ +    K
Sbjct: 10  HKGCTKMFRDNSAMRKHLHTHGPR---VHVCAECGKAFVESSKLKR-----HQLVHTGEK 61

Query: 76  LHECDL--CGKNFSQRNNLKRQANGSNVNNRFSSNAELNKHSSAIHQRL----KLHECDL 129
             +C    CGK FS   NL+                         H R+    + + C  
Sbjct: 62  PFQCTFEGCGKRFSLDFNLRT------------------------HVRIHTGDRPYVCPF 97

Query: 130 --CGKNFSQRNNLKRH 143
             C K F+Q  NLK H
Sbjct: 98  DGCNKKFAQSTNLKSH 113

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A* Length = 124

 Score = 51.4 bits (124), Expect = 4e-08
 Identities = 30/81 (37%), Positives = 38/81 (46%), Gaps = 7/81 (8%)

Query: 18  HMCELCYKVFESRENLMRHLKIHDDKESKRFKC--EQCDKRFSSNAELNKHSSAIHQRLK 75
           H+C  C K F     L RH  +H  +  K F+C  E C KRFS +  L  H   IH   +
Sbjct: 35  HVCAECGKAFVESSKLKRHQLVHTGE--KPFQCTFEGCGKRFSLDFNLRTHVR-IHTGDR 91

Query: 76  LHECDL--CGKNFSQRNNLKR 94
            + C    C K F+Q  NLK 
Sbjct: 92  PYVCPFDGCNKKFAQSTNLKS 112

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A* Length = 124

 Score = 42.9 bits (102), Expect = 4e-05
 Identities = 28/133 (21%), Positives = 39/133 (29%), Gaps = 54/133 (40%)

Query: 665 CTLCDKTFTRKDSLKKHIRIFHTQNQPQHTNVIEVALGARANAAFIDRIRCELCDKSFTR 724
           C  C K F     LK+H  + HT  +P                          C K F+ 
Sbjct: 37  CAECGKAFVESSKLKRHQLV-HTGEKPFQCTFEG-------------------CGKRFSL 76

Query: 725 KDSLKKHNRIFHGGADP-KVMDEQMARGSADFLEVVLNEDGEGEPVSITNEILCKICNRT 783
             +L+ H RI H G  P     +                                 CN+ 
Sbjct: 77  DFNLRTHVRI-HTGDRPYVCPFDG--------------------------------CNKK 103

Query: 784 FTRNYNLKKHMKT 796
           F ++ NLK H+ T
Sbjct: 104 FAQSTNLKSHILT 116

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A* Length = 124

 Score = 42.5 bits (101), Expect = 5e-05
 Identities = 35/127 (27%), Positives = 50/127 (39%), Gaps = 32/127 (25%)

Query: 214 KCEF--CGKVFLKKSNLKAHIENNHLD--YSCLEC-KAVGEEISFDTKKNLLLHLKTKHK 268
            C    C K+F   S ++ H  + H    + C EC K      +F     L  H    H 
Sbjct: 7   ACPHKGCTKMFRDNSAMRKH-LHTHGPRVHVCAECGK------AFVESSKLKRHQLV-H- 57

Query: 269 NVISNVYLT------CLI--CFKTFLTEVDLGKHMKMHMDDNQIQCRF--CNKYFSRNYN 318
                   T      C    C K F  + +L  H+++H  D    C F  CNK F+++ N
Sbjct: 58  --------TGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVCPFDGCNKKFAQSTN 109

Query: 319 LKQHMKT 325
           LK H+ T
Sbjct: 110 LKSHILT 116

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 110

 Score = 69.8 bits (172), Expect = 1e-14
 Identities = 26/125 (20%), Positives = 46/125 (36%), Gaps = 34/125 (27%)

Query: 20  CELCYKVFESRENLMRHLKIHDDKESKRFKCEQCDKRFSSNAELNKHSSAIHQRLKLHEC 79
           C+ C K F  +    RH+ +H     + + C  C K+F     L  H   IH  +K +EC
Sbjct: 13  CQ-CGKSFTHKSQRDRHMSMHLGL--RPYGCGVCGKKFKMKHHLVGHMK-IHTGIKPYEC 68

Query: 80  DLCGKNFSQRNNLKRQANGSNVNNRFSSNAELNKHSSAIHQRL----KLHECDLCGKNFS 135
           ++C K F  R++                           H+ +    K +E     +N +
Sbjct: 69  NICAKRFMWRDSF--------------------------HRHVTSCTKSYEAAKAEQNTT 102

Query: 136 QRNNL 140
           + +  
Sbjct: 103 EASGP 107

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 110

 Score = 66.3 bits (163), Expect = 2e-13
 Identities = 31/115 (26%), Positives = 47/115 (40%), Gaps = 11/115 (9%)

Query: 118 IHQRLKLHECDLCGKNFSQRNNLKRHLEEVHRTDGMK-FECYVCSKVLATSHSLKRHLLI 176
                KL+ C  CGK+F+ ++   RH   +H   G++ + C VC K     H L  H+ I
Sbjct: 4   GSSGDKLYPCQ-CGKSFTHKSQRDRH-MSMHL--GLRPYGCGVCGKKFKMKHHLVGHMKI 59

Query: 177 HNGPK-YTCEICAKEFTRVYELNIHKKLHEDESVANQLKCEFCGKVFLKKSNLKA 230
           H G K Y C ICAK F        H+ +          +     +   + S   +
Sbjct: 60  HTGIKPYECNICAKRFMWRDSF--HRHVTSCT---KSYEAAKAEQNTTEASGPSS 109

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 110

 Score = 63.2 bits (155), Expect = 2e-12
 Identities = 27/131 (20%), Positives = 47/131 (35%), Gaps = 38/131 (29%)

Query: 70  IHQRLKLHECDLCGKNFSQRNNLKRQANGSNVNNRFSSNAELNKHSSAIHQRL----KLH 125
                KL+ C  CGK+F+ ++                            H  +    + +
Sbjct: 4   GSSGDKLYPCQ-CGKSFTHKSQR------------------------DRHMSMHLGLRPY 38

Query: 126 ECDLCGKNFSQRNNLKRHLEEVHRT-DGMK-FECYVCSKVLATSHSLKRHLLIHNGPK-Y 182
            C +CGK F  +++L  H     +   G+K +EC +C+K      S  RH  + +  K Y
Sbjct: 39  GCGVCGKKFKMKHHLVGH----MKIHTGIKPYECNICAKRFMWRDSFHRH--VTSCTKSY 92

Query: 183 TCEICAKEFTR 193
                 +  T 
Sbjct: 93  EAAKAEQNTTE 103

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A* Length = 119

 Score = 69.1 bits (170), Expect = 3e-14
 Identities = 43/144 (29%), Positives = 58/144 (40%), Gaps = 41/144 (28%)

Query: 46  KRFKCEQ--CDKRFSSNAELNKHSSAIHQRLKLHECDL--CGKNFSQRNNLKRQANGSNV 101
           + F C    C+KR+   + L  HS   H   K ++CD   C + FS+ + LKR       
Sbjct: 5   RPFMCAYPGCNKRYFKLSHLQMHSR-KHTGEKPYQCDFKDCERRFSRSDQLKR------- 56

Query: 102 NNRFSSNAELNKHSSAIHQRL----KLHECDLCGKNFSQRNNLKRHLEEVHRT-DGMK-F 155
                            HQR     K  +C  C + FS+ ++LK H     RT  G K F
Sbjct: 57  -----------------HQRRHTGVKPFQCKTCQRKFSRSDHLKTH----TRTHTGEKPF 95

Query: 156 ECYV--CSKVLATSHSLKRHLLIH 177
            C    C K  A S  L RH  +H
Sbjct: 96  SCRWPSCQKKFARSDELVRHHNMH 119

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A* Length = 119

 Score = 66.4 bits (163), Expect = 2e-13
 Identities = 33/136 (24%), Positives = 54/136 (39%), Gaps = 37/136 (27%)

Query: 18  HMCE--LCYKVFESRENLMRHLKIHDDKESKRFKCE--QCDKRFSSNAELNKHSSAIHQR 73
            MC    C K +    +L  H + H  +  K ++C+   C++RFS + +L +H    H  
Sbjct: 7   FMCAYPGCNKRYFKLSHLQMHSRKHTGE--KPYQCDFKDCERRFSRSDQLKRHQR-RHTG 63

Query: 74  LKLHECDLCGKNFSQRNNLKRQANGSNVNNRFSSNAELNKHSSAIHQRL----KLHECDL 129
           +K  +C  C + FS+ ++LK                         H R     K   C  
Sbjct: 64  VKPFQCKTCQRKFSRSDHLKT------------------------HTRTHTGEKPFSCRW 99

Query: 130 --CGKNFSQRNNLKRH 143
             C K F++ + L RH
Sbjct: 100 PSCQKKFARSDELVRH 115

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A* Length = 119

 Score = 50.2 bits (121), Expect = 1e-07
 Identities = 28/130 (21%), Positives = 40/130 (30%), Gaps = 56/130 (43%)

Query: 668 CDKTFTRKDSLKKHIRIFHTQNQPQHTNVIEVALGARANAAFIDRIRCELCDKSFTRKDS 727
           C++ F+R D LK+H R  HT  +P                      +C+ C + F+R D 
Sbjct: 44  CERRFSRSDQLKRHQRR-HTGVKP---------------------FQCKTCQRKFSRSDH 81

Query: 728 LKKHNRIFHGGADP-KVMDEQMARGSADFLEVVLNEDGEGEPVSITNEILCKICNRTFTR 786
           LK H R  H G  P                                       C + F R
Sbjct: 82  LKTHTRT-HTGEKPFSCRWPS--------------------------------CQKKFAR 108

Query: 787 NYNLKKHMKT 796
           +  L +H   
Sbjct: 109 SDELVRHHNM 118

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A* Length = 119

 Score = 48.7 bits (117), Expect = 4e-07
 Identities = 29/129 (22%), Positives = 44/129 (34%), Gaps = 54/129 (41%)

Query: 668 CDKTFTRKDSLKKHIRIFHTQNQPQHTNVIEVALGARANAAFIDRIRCELCDKSFTRKDS 727
           C+K + +   L+ H R  HT  +P   +  +                   C++ F+R D 
Sbjct: 14  CNKRYFKLSHLQMHSRK-HTGEKPYQCDFKD-------------------CERRFSRSDQ 53

Query: 728 LKKHNRIFHGGADPKVMDEQMARGSADFLEVVLNEDGEGEPVSITNEILCKICNRTFTRN 787
           LK+H R  H G  P                                   CK C R F+R+
Sbjct: 54  LKRHQRR-HTGVKPFQ---------------------------------CKTCQRKFSRS 79

Query: 788 YNLKKHMKT 796
            +LK H +T
Sbjct: 80  DHLKTHTRT 88

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A* Length = 119

 Score = 47.1 bits (113), Expect = 1e-06
 Identities = 33/154 (21%), Positives = 49/154 (31%), Gaps = 51/154 (33%)

Query: 155 FEC--YVCSKVLATSHSLKRHLLIHNGPK-YTCEI--CAKEFTRVYELNIHKKLHEDESV 209
           F C    C+K       L+ H   H G K Y C+   C + F+R  +L  H++ H     
Sbjct: 7   FMCAYPGCNKRYFKLSHLQMHSRKHTGEKPYQCDFKDCERRFSRSDQLKRHQRRHTGV-- 64

Query: 210 ANQLKCEFCGKVFLKKSNLKAHI-----ENNHLDYSCLECKAVGEEISFDTKKNLLLHLK 264
               +C+ C + F +  +LK H      E     +SC                       
Sbjct: 65  -KPFQCKTCQRKFSRSDHLKTHTRTHTGEK---PFSC----------------------- 97

Query: 265 TKHKNVISNVYLTCLICFKTFLTEVDLGKHMKMH 298
                           C K F    +L +H  MH
Sbjct: 98  ------------RWPSCQKKFARSDELVRHHNMH 119

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A* Length = 119

 Score = 45.6 bits (109), Expect = 4e-06
 Identities = 20/72 (27%), Positives = 26/72 (36%), Gaps = 24/72 (33%)

Query: 665 CTLCDKTFTRKDSLKKHIRIFHTQNQPQHTNVIEVALGARANAAFIDRIRCEL--CDKSF 722
           C  C + F+R D LK H R  HT  +P                       C    C K F
Sbjct: 69  CKTCQRKFSRSDHLKTHTRT-HTGEKP---------------------FSCRWPSCQKKF 106

Query: 723 TRKDSLKKHNRI 734
            R D L +H+ +
Sbjct: 107 ARSDELVRHHNM 118

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A* Length = 119

 Score = 43.7 bits (104), Expect = 2e-05
 Identities = 28/155 (18%), Positives = 47/155 (30%), Gaps = 54/155 (34%)

Query: 182 YTCE--ICAKEFTRVYELNIHKKLHEDESVANQLKCEF--CGKVFLKKSNLKAHI----- 232
           + C    C K + ++  L +H + H  E      +C+F  C + F +   LK H      
Sbjct: 7   FMCAYPGCNKRYFKLSHLQMHSRKHTGE---KPYQCDFKDCERRFSRSDQLKRHQRRHTG 63

Query: 233 ENNHLDYSCLECKAVGEEISFDTKKNLLLHLKTKHKNVISNVYLTCLICFKTFLTEVDLG 292
                 + C  C+                                     + F     L 
Sbjct: 64  VK---PFQCKTCQ-------------------------------------RKFSRSDHLK 83

Query: 293 KHMKMHMDDNQIQCRF--CNKYFSRNYNLKQHMKT 325
            H + H  +    CR+  C K F+R+  L +H   
Sbjct: 84  THTRTHTGEKPFSCRWPSCQKKFARSDELVRHHNM 118

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A* Length = 119

 Score = 43.3 bits (103), Expect = 3e-05
 Identities = 33/143 (23%), Positives = 47/143 (32%), Gaps = 71/143 (49%)

Query: 452 CLKTFAKKDSLKKHMKVFHTYISPDAIKEESGEGKP---NILEVILQEGKVPNNNAIIQC 508
           C K + K   L+ H +  HT           GE KP   +  +                 
Sbjct: 14  CNKRYFKLSHLQMHSRK-HT-----------GE-KPYQCDFKD----------------- 43

Query: 509 RICSKTFTRKDSLRKHMRRFHIINDTNVKKEFTEGQINRNMLDVILKESGHEIKSRIP-- 566
             C + F+R D L++H RR H    T VK                            P  
Sbjct: 44  --CERRFSRSDQLKRHQRR-H----TGVK----------------------------PFQ 68

Query: 567 CELCYKTFTRKDSLRKHMKIFHT 589
           C+ C + F+R D L+ H +  HT
Sbjct: 69  CKTCQRKFSRSDHLKTHTRT-HT 90

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A* Length = 119

 Score = 42.1 bits (100), Expect = 7e-05
 Identities = 32/139 (23%), Positives = 43/139 (30%), Gaps = 68/139 (48%)

Query: 452 CLKTFAKKDSLKKHMKVFHTYISPDAIKEESGEGKPNILEVILQEGKVPNNNAIIQCRIC 511
           C + F++ D LK+H +  HT           G  KP                   QC+ C
Sbjct: 44  CERRFSRSDQLKRHQRR-HT-----------GV-KPF------------------QCKTC 72

Query: 512 SKTFTRKDSLRKHMRRFHIINDTNVKKEFTEGQINRNMLDVILKESGHEIKSRIP--CEL 569
            + F+R D L+ H R  H    T  K                            P  C  
Sbjct: 73  QRKFSRSDHLKTHTRT-H----TGEK----------------------------PFSCRW 99

Query: 570 --CYKTFTRKDSLRKHMKI 586
             C K F R D L +H  +
Sbjct: 100 PSCQKKFARSDELVRHHNM 118

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A* Length = 119

 Score = 39.8 bits (94), Expect = 4e-04
 Identities = 23/81 (28%), Positives = 28/81 (34%), Gaps = 33/81 (40%)

Query: 448 QCHICLKTFAKKDSLKKHMKVFHTYISPDAIKEESGEGKPNILEVILQEGKVPNNNAIIQ 507
           QC  C + F++ D LK H +  HT           GE KP                    
Sbjct: 68  QCKTCQRKFSRSDHLKTHTRT-HT-----------GE-KP------------------FS 96

Query: 508 CRI--CSKTFTRKDSLRKHMR 526
           CR   C K F R D L +H  
Sbjct: 97  CRWPSCQKKFARSDELVRHHN 117

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A Length = 88

 Score = 67.1 bits (165), Expect = 5e-14
 Identities = 23/83 (27%), Positives = 37/83 (44%), Gaps = 6/83 (7%)

Query: 122 LKLHECDLCGKNFSQRNNLKRHLEEVHRT-DGMK-FECYVCSKVLATSHSLKRHLLIHNG 179
           +K  +C +C +NFS+ ++L  H     RT  G K F C +C +  A S   KRH  I + 
Sbjct: 1   MKPFQCRICMRNFSRSDHLTTH----IRTHTGEKPFACDICGRKFARSDERKRHRDIQHI 56

Query: 180 PKYTCEICAKEFTRVYELNIHKK 202
                +   +  ++ Y L     
Sbjct: 57  LPILEDKVEELLSKNYHLENEVA 79

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A Length = 88

 Score = 65.2 bits (160), Expect = 3e-13
 Identities = 21/105 (20%), Positives = 35/105 (33%), Gaps = 36/105 (34%)

Query: 46  KRFKCEQCDKRFSSNAELNKHSSAIHQRL----KLHECDLCGKNFSQRNNLKRQANGSNV 101
           K F+C  C + FS +  L       H R     K   CD+CG+ F++ +  KR       
Sbjct: 2   KPFQCRICMRNFSRSDHLTT-----HIRTHTGEKPFACDICGRKFARSDERKR------- 49

Query: 102 NNRFSSNAELNKHSSAIHQRL---KLHECDLCGKNFSQRNNLKRH 143
                            H+ +        D   +  S+  +L+  
Sbjct: 50  -----------------HRDIQHILPILEDKVEELLSKNYHLENE 77

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A Length = 88

 Score = 60.6 bits (148), Expect = 1e-11
 Identities = 21/116 (18%), Positives = 42/116 (36%), Gaps = 36/116 (31%)

Query: 74  LKLHECDLCGKNFSQRNNLKRQANGSNVNNRFSSNAELNKHSSAIHQRL----KLHECDL 129
           +K  +C +C +NFS+ ++L                          H R     K   CD+
Sbjct: 1   MKPFQCRICMRNFSRSDHLTT------------------------HIRTHTGEKPFACDI 36

Query: 130 CGKNFSQRNNLKRHLEEVHRTDGMK-FECYVCSKVLATSHSLKRHLL---IHNGPK 181
           CG+ F++ +  KRH         +         ++L+ ++ L+  +       G +
Sbjct: 37  CGRKFARSDERKRH----RDIQHILPILEDKVEELLSKNYHLENEVARLKKLVGER 88

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A Length = 88

 Score = 60.6 bits (148), Expect = 1e-11
 Identities = 18/79 (22%), Positives = 36/79 (45%), Gaps = 5/79 (6%)

Query: 155 FECYVCSKVLATSHSLKRHLLIHNGPK-YTCEICAKEFTRVYELNIHKKLHEDESVANQL 213
           F+C +C +  + S  L  H+  H G K + C+IC ++F R  E   H+ +         +
Sbjct: 4   FQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHRDIQHILP----I 59

Query: 214 KCEFCGKVFLKKSNLKAHI 232
             +   ++  K  +L+  +
Sbjct: 60  LEDKVEELLSKNYHLENEV 78

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A Length = 88

 Score = 59.8 bits (146), Expect = 2e-11
 Identities = 16/78 (20%), Positives = 35/78 (44%), Gaps = 10/78 (12%)

Query: 20 CELCYKVFESRENLMRHLKIHDDKESKRFKCEQCDKRFSSNAELNKHSSAIHQRL---KL 76
          C +C + F   ++L  H++ H  +  K F C+ C ++F+ + E  +     H+ +     
Sbjct: 6  CRICMRNFSRSDHLTTHIRTHTGE--KPFACDICGRKFARSDERKR-----HRDIQHILP 58

Query: 77 HECDLCGKNFSQRNNLKR 94
             D   +  S+  +L+ 
Sbjct: 59 ILEDKVEELLSKNYHLEN 76

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A Length = 88

 Score = 50.6 bits (122), Expect = 4e-08
 Identities = 26/131 (19%), Positives = 39/131 (29%), Gaps = 57/131 (43%)

Query: 665 CTLCDKTFTRKDSLKKHIRIFHTQNQPQHTNVIEVALGARANAAFIDRIRCELCDKSFTR 724
           C +C + F+R D L  HIR  HT  +P                       C++C + F R
Sbjct: 6   CRICMRNFSRSDHLTTHIRT-HTGEKP---------------------FACDICGRKFAR 43

Query: 725 KDSLKKHNRIFHGGADPKVMDEQMARGSADFLEVVLNEDGEGEPVSITNEILCKICNRTF 784
            D  K+H  I                                 P      IL        
Sbjct: 44  SDERKRHRDI-QH----------------------------ILP------ILEDKVEELL 68

Query: 785 TRNYNLKKHMK 795
           ++NY+L+  + 
Sbjct: 69  SKNYHLENEVA 79

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A Length = 88

 Score = 45.2 bits (108), Expect = 3e-06
 Identities = 22/144 (15%), Positives = 36/144 (25%), Gaps = 65/144 (45%)

Query: 448 QCHICLKTFAKKDSLKKHMKVFHTYISPDAIKEESGEGKPNILEVILQEGKVPNNNAIIQ 507
           QC IC++ F++ D L  H++  HT           GE KP                    
Sbjct: 5   QCRICMRNFSRSDHLTTHIRT-HT-----------GE-KP------------------FA 33

Query: 508 CRICSKTFTRKDSLRKHMRRFHIINDTNVKKEFTEGQINRNMLDVILKESGHEIKSRIPC 567
           C IC + F R D  ++H                                           
Sbjct: 34  CDICGRKFARSDERKRHRD-------IQHILPIL-------------------------E 61

Query: 568 ELCYKTFTRKDSLRKHMKIF--HT 589
           +   +  ++   L   +       
Sbjct: 62  DKVEELLSKNYHLENEVARLKKLV 85

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A Length = 88

 Score = 41.3 bits (98), Expect = 7e-05
 Identities = 19/83 (22%), Positives = 26/83 (31%), Gaps = 34/83 (40%)

Query: 714 RCELCDKSFTRKDSLKKHNRIFHGGADPKVMDEQMARGSADFLEVVLNEDGEGEPVSITN 773
           +C +C ++F+R D L  H R  H G  P                                
Sbjct: 5   QCRICMRNFSRSDHLTTHIRT-HTGEKPFA------------------------------ 33

Query: 774 EILCKICNRTFTRNYNLKKHMKT 796
              C IC R F R+   K+H   
Sbjct: 34  ---CDICGRKFARSDERKRHRDI 53

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1 Length = 106

 Score = 67.5 bits (166), Expect = 7e-14
 Identities = 26/120 (21%), Positives = 41/120 (34%), Gaps = 39/120 (32%)

Query: 32  NLMRHLKIHDDKESKRFKCEQCDKRFSSNAELNKHSSAIHQRL----KLHECDLCGKNFS 87
                      K  K F C+ C + F+ +  L      IH+R     + + CD+C K F 
Sbjct: 4   GSSGGRLPSKTK--KEFICKFCGRHFTKSYNL-----LIHERTHTDERPYTCDICHKAFR 56

Query: 88  QRNNLKRQANGSNVNNRFSSNAELNKHSSAIHQRL----KLHECDLCGKNFSQRNNLKRH 143
           ++++L                          H+ +    K  +C  CGK F Q   L  H
Sbjct: 57  RQDHL------------------------RDHRYIHSKEKPFKCQECGKGFCQSRTLAVH 92

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1 Length = 106

 Score = 65.5 bits (161), Expect = 3e-13
 Identities = 27/95 (28%), Positives = 42/95 (44%), Gaps = 11/95 (11%)

Query: 117 AIHQRL----KLHECDLCGKNFSQRNNLKRHLEEVHRT-DGMK-FECYVCSKVLATSHSL 170
           +  +      K   C  CG++F++  NL  H     RT    + + C +C K       L
Sbjct: 6   SGGRLPSKTKKEFICKFCGRHFTKSYNLLIH----ERTHTDERPYTCDICHKAFRRQDHL 61

Query: 171 KRHLLIHNGPK-YTCEICAKEFTRVYELNIHKKLH 204
           + H  IH+  K + C+ C K F +   L +HK LH
Sbjct: 62  RDHRYIHSKEKPFKCQECGKGFCQSRTLAVHKTLH 96

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1 Length = 106

 Score = 62.1 bits (152), Expect = 4e-12
 Identities = 27/127 (21%), Positives = 45/127 (35%), Gaps = 39/127 (30%)

Query: 69  AIHQRL----KLHECDLCGKNFSQRNNLKRQANGSNVNNRFSSNAELNKHSSAIHQRL-- 122
           +  +      K   C  CG++F++  NL                         IH+R   
Sbjct: 6   SGGRLPSKTKKEFICKFCGRHFTKSYNL------------------------LIHERTHT 41

Query: 123 --KLHECDLCGKNFSQRNNLKRHLEEVHRT-DGMK-FECYVCSKVLATSHSLKRHLLIHN 178
             + + CD+C K F ++++L+ H           K F+C  C K    S +L  H  +H 
Sbjct: 42  DERPYTCDICHKAFRRQDHLRDH----RYIHSKEKPFKCQECGKGFCQSRTLAVHKTLHM 97

Query: 179 GPK-YTC 184
                T 
Sbjct: 98  QTSSPTA 104

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1 Length = 106

 Score = 59.8 bits (146), Expect = 4e-11
 Identities = 24/73 (32%), Positives = 34/73 (46%), Gaps = 3/73 (4%)

Query: 20 CELCYKVFESRENLMRHLKIHDDKESKRFKCEQCDKRFSSNAELNKHSSAIHQRLKLHEC 79
          C+ C + F    NL+ H + H D+  + + C+ C K F     L  H   IH + K  +C
Sbjct: 20 CKFCGRHFTKSYNLLIHERTHTDE--RPYTCDICHKAFRRQDHLRDHRY-IHSKEKPFKC 76

Query: 80 DLCGKNFSQRNNL 92
            CGK F Q   L
Sbjct: 77 QECGKGFCQSRTL 89

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1 Length = 106

 Score = 51.7 bits (125), Expect = 2e-08
 Identities = 20/66 (30%), Positives = 31/66 (46%), Gaps = 4/66 (6%)

Query: 167 SHSLKRHLLIHNGPK-YTCEICAKEFTRVYELNIHKKLHEDESVANQLKCEFCGKVFLKK 225
           S       L     K + C+ C + FT+ Y L IH++ H DE       C+ C K F ++
Sbjct: 2   SSGSSGGRLPSKTKKEFICKFCGRHFTKSYNLLIHERTHTDE---RPYTCDICHKAFRRQ 58

Query: 226 SNLKAH 231
            +L+ H
Sbjct: 59  DHLRDH 64

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1 Length = 106

 Score = 39.3 bits (93), Expect = 4e-04
 Identities = 27/133 (20%), Positives = 40/133 (30%), Gaps = 58/133 (43%)

Query: 665 CTLCDKTFTRKDSLKKHIRIFHTQNQPQHTNVIEVALGARANAAFIDRIRCELCDKSFTR 724
           C  C + FT+  +L  H R  HT  +P                       C++C K+F R
Sbjct: 20  CKFCGRHFTKSYNLLIHERT-HTDERP---------------------YTCDICHKAFRR 57

Query: 725 KDSLKKHNRIFHGGADP-KVMDEQMARGSADFLEVVLNEDGEGEPVSITNEILCKICNRT 783
           +D L+ H  I H    P K                                  C+ C + 
Sbjct: 58  QDHLRDHRYI-HSKEKPFK----------------------------------CQECGKG 82

Query: 784 FTRNYNLKKHMKT 796
           F ++  L  H   
Sbjct: 83  FCQSRTLAVHKTL 95

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 95

 Score = 67.1 bits (165), Expect = 7e-14
 Identities = 27/109 (24%), Positives = 42/109 (38%), Gaps = 31/109 (28%)

Query: 46  KRFKCEQCDKRFSSNAELNKHSSAIHQRLKLHECDLCGKNFSQRNNLKRQANGSNVNNRF 105
               CE C K F     LN+H    H   K + C +CG  F +++ +             
Sbjct: 6   SGVACEICGKIFRDVYHLNRHKL-SHSGEKPYSCPVCGLRFKRKDRM------------- 51

Query: 106 SSNAELNKHSSAIHQR------LKLHECDLCGKNFSQRNNLKRHLEEVH 148
                      + H R       K + C  CGK FS+ ++L  H+++VH
Sbjct: 52  -----------SYHVRSHDGSVGKPYICQSCGKGFSRPDHLNGHIKQVH 89

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 95

 Score = 63.3 bits (155), Expect = 1e-12
 Identities = 26/83 (31%), Positives = 40/83 (48%), Gaps = 2/83 (2%)

Query: 155 FECYVCSKVLATSHSLKRHLLIHNGPK-YTCEICAKEFTRVYELNIHKKLHEDESVANQL 213
             C +C K+    + L RH L H+G K Y+C +C   F R   ++ H + H+        
Sbjct: 8   VACEICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSV-GKPY 66

Query: 214 KCEFCGKVFLKKSNLKAHIENNH 236
            C+ CGK F +  +L  HI+  H
Sbjct: 67  ICQSCGKGFSRPDHLNGHIKQVH 89

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 95

 Score = 60.2 bits (147), Expect = 2e-11
 Identities = 24/77 (31%), Positives = 35/77 (45%), Gaps = 5/77 (6%)

Query: 20 CELCYKVFESRENLMRHLKIHDDKESKRFKCEQCDKRFSSNAELNKHSSAIH--QRLKLH 77
          CE+C K+F    +L RH   H  +  K + C  C  RF     ++ H    H     K +
Sbjct: 10 CEICGKIFRDVYHLNRHKLSHSGE--KPYSCPVCGLRFKRKDRMSYHVR-SHDGSVGKPY 66

Query: 78 ECDLCGKNFSQRNNLKR 94
           C  CGK FS+ ++L  
Sbjct: 67 ICQSCGKGFSRPDHLNG 83

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 95

 Score = 51.3 bits (124), Expect = 3e-08
 Identities = 16/52 (30%), Positives = 26/52 (50%)

Query: 20 CELCYKVFESRENLMRHLKIHDDKESKRFKCEQCDKRFSSNAELNKHSSAIH 71
          C +C   F+ ++ +  H++ HD    K + C+ C K FS    LN H   +H
Sbjct: 38 CPVCGLRFKRKDRMSYHVRSHDGSVGKPYICQSCGKGFSRPDHLNGHIKQVH 89

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 95

 Score = 49.4 bits (119), Expect = 1e-07
 Identities = 30/98 (30%), Positives = 36/98 (36%), Gaps = 17/98 (17%)

Query: 177 HNGPK-YTCEICAKEFTRVYELNIHKKLHEDESVANQLKCEFCGKVFLKKSNLKAHI--- 232
            +G     CEIC K F  VY LN HK  H  E       C  CG  F +K  +  H+   
Sbjct: 2   SSGSSGVACEICGKIFRDVYHLNRHKLSHSGE---KPYSCPVCGLRFKRKDRMSYHVRSH 58

Query: 233 --ENNHLDYSCLEC-KAVGEEISFDTKKNLLLHLKTKH 267
                   Y C  C K       F    +L  H+K  H
Sbjct: 59  DGSVGK-PYICQSCGKG------FSRPDHLNGHIKQVH 89

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 95

 Score = 47.1 bits (113), Expect = 8e-07
 Identities = 29/134 (21%), Positives = 41/134 (30%), Gaps = 54/134 (40%)

Query: 665 CTLCDKTFTRKDSLKKHIRIFHTQNQPQHTNVIEVALGARANAAFIDRIRCELCDKSFTR 724
           C +C K F     L +H    H+  +P                       C +C   F R
Sbjct: 10  CEICGKIFRDVYHLNRHKLS-HSGEKP---------------------YSCPVCGLRFKR 47

Query: 725 KDSLKKHNRIFHGGADPKVMDEQMARGSADFLEVVLNEDGEGEPVSITNEILCKICNRTF 784
           KD +  H R  H G+  K                         P        C+ C + F
Sbjct: 48  KDRMSYHVRS-HDGSVGK-------------------------PYI------CQSCGKGF 75

Query: 785 TRNYNLKKHMKTVH 798
           +R  +L  H+K VH
Sbjct: 76  SRPDHLNGHIKQVH 89

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 95

 Score = 45.9 bits (110), Expect = 2e-06
 Identities = 33/142 (23%), Positives = 45/142 (31%), Gaps = 60/142 (42%)

Query: 448 QCHICLKTFAKKDSLKKHMKVFHTYISPDAIKEESGEGKPNILEVILQEGKVPNNNAIIQ 507
            C IC K F     L +H    H+           GE KP                    
Sbjct: 9   ACEICGKIFRDVYHLNRHKLS-HS-----------GE-KP------------------YS 37

Query: 508 CRICSKTFTRKDSLRKHMRRFHIINDTNVKKEFTEGQINRNMLDVILKESGHEIKSRIPC 567
           C +C   F RKD +  H+R     +D +V K +                          C
Sbjct: 38  CPVCGLRFKRKDRMSYHVR----SHDGSVGKPYI-------------------------C 68

Query: 568 ELCYKTFTRKDSLRKHMKIFHT 589
           + C K F+R D L  H+K  H+
Sbjct: 69  QSCGKGFSRPDHLNGHIKQVHS 90

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 95

 Score = 41.7 bits (99), Expect = 5e-05
 Identities = 20/76 (26%), Positives = 27/76 (35%), Gaps = 24/76 (31%)

Query: 665 CTLCDKTFTRKDSLKKHIRIFHT--QNQPQHTNVIEVALGARANAAFIDRIRCELCDKSF 722
           C +C   F RKD +  H+R  H     +P                       C+ C K F
Sbjct: 38  CPVCGLRFKRKDRMSYHVRS-HDGSVGKP---------------------YICQSCGKGF 75

Query: 723 TRKDSLKKHNRIFHGG 738
           +R D L  H +  H G
Sbjct: 76  SRPDHLNGHIKQVHSG 91

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 96

 Score = 67.1 bits (165), Expect = 7e-14
 Identities = 29/85 (34%), Positives = 46/85 (54%), Gaps = 7/85 (8%)

Query: 123 KLHECDLCGKNFSQRNNLKRHLEEVHRT-DGMK-FECYVCSKVLATSHSLKRHLLIHNGP 180
             H+C++CGK FS+++ LK H     R   G+K ++C  C    A S SL +HL IH+  
Sbjct: 7   GPHKCEVCGKCFSRKDKLKTH----MRCHTGVKPYKCKTCDYAAADSSSLNKHLRIHSDE 62

Query: 181 K-YTCEICAKEFTRVYELNIHKKLH 204
           + + C+IC        +L +H + H
Sbjct: 63  RPFKCQICPYASRNSSQLTVHLRSH 87

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 96

 Score = 63.6 bits (156), Expect = 1e-12
 Identities = 20/102 (19%), Positives = 33/102 (32%), Gaps = 29/102 (28%)

Query: 46  KRFKCEQCDKRFSSNAELNKHSSAIHQRLKLHECDLCGKNFSQRNNLKRQANGSNVNNRF 105
              KCE C K FS   +L  H    H  +K ++C  C    +  ++L +           
Sbjct: 7   GPHKCEVCGKCFSRKDKLKTHMR-CHTGVKPYKCKTCDYAAADSSSLNK----------- 54

Query: 106 SSNAELNKHSSAIHQRL----KLHECDLCGKNFSQRNNLKRH 143
                        H R+    +  +C +C       + L  H
Sbjct: 55  -------------HLRIHSDERPFKCQICPYASRNSSQLTVH 83

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 96

 Score = 61.3 bits (150), Expect = 6e-12
 Identities = 23/77 (29%), Positives = 37/77 (48%), Gaps = 3/77 (3%)

Query: 18 HMCELCYKVFESRENLMRHLKIHDDKESKRFKCEQCDKRFSSNAELNKHSSAIHQRLKLH 77
          H CE+C K F  ++ L  H++ H     K +KC+ CD   + ++ LNKH   IH   +  
Sbjct: 9  HKCEVCGKCFSRKDKLKTHMRCHTGV--KPYKCKTCDYAAADSSSLNKH-LRIHSDERPF 65

Query: 78 ECDLCGKNFSQRNNLKR 94
          +C +C       + L  
Sbjct: 66 KCQICPYASRNSSQLTV 82

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 96

 Score = 61.3 bits (150), Expect = 7e-12
 Identities = 26/117 (22%), Positives = 42/117 (35%), Gaps = 35/117 (29%)

Query: 75  KLHECDLCGKNFSQRNNLKRQANGSNVNNRFSSNAELNKHSSAIHQRL----KLHECDLC 130
             H+C++CGK FS+++ LK                         H R     K ++C  C
Sbjct: 7   GPHKCEVCGKCFSRKDKLKT------------------------HMRCHTGVKPYKCKTC 42

Query: 131 GKNFSQRNNLKRHLEEVHRT-DGMK-FECYVCSKVLATSHSLKRHLLIHNGPK-YTC 184
               +  ++L +H     R     + F+C +C      S  L  HL  H G    + 
Sbjct: 43  DYAAADSSSLNKH----LRIHSDERPFKCQICPYASRNSSQLTVHLRSHTGDSGPSS 95

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 96

 Score = 48.6 bits (117), Expect = 2e-07
 Identities = 31/133 (23%), Positives = 43/133 (32%), Gaps = 58/133 (43%)

Query: 665 CTLCDKTFTRKDSLKKHIRIFHTQNQPQHTNVIEVALGARANAAFIDRIRCELCDKSFTR 724
           C +C K F+RKD LK H+R  HT  +P                      +C+ CD +   
Sbjct: 11  CEVCGKCFSRKDKLKTHMRC-HTGVKP---------------------YKCKTCDYAAAD 48

Query: 725 KDSLKKHNRIFHGGADP-KVMDEQMARGSADFLEVVLNEDGEGEPVSITNEILCKICNRT 783
             SL KH RI H    P K                                  C+IC   
Sbjct: 49  SSSLNKHLRI-HSDERPFK----------------------------------CQICPYA 73

Query: 784 FTRNYNLKKHMKT 796
              +  L  H+++
Sbjct: 74  SRNSSQLTVHLRS 86

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 96

 Score = 39.7 bits (94), Expect = 3e-04
 Identities = 30/144 (20%), Positives = 45/144 (31%), Gaps = 67/144 (46%)

Query: 448 QCHICLKTFAKKDSLKKHMKVFHTYISPDAIKEESGEGKPNILEVILQEGKVPNNNAIIQ 507
           +C +C K F++KD LK HM+  HT           G  KP                   +
Sbjct: 10  KCEVCGKCFSRKDKLKTHMRC-HT-----------GV-KP------------------YK 38

Query: 508 CRICSKTFTRKDSLRKHMRRFHIINDTNVKKEFTEGQINRNMLDVILKESGHEIKSRIP- 566
           C+ C        SL KH+ R H    ++ +                            P 
Sbjct: 39  CKTCDYAAADSSSLNKHL-RIH----SDER----------------------------PF 65

Query: 567 -CELCYKTFTRKDSLRKHMKIFHT 589
            C++C         L  H++  HT
Sbjct: 66  KCQICPYASRNSSQLTVHLRS-HT 88

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C Length = 90

 Score = 66.7 bits (164), Expect = 8e-14
 Identities = 29/87 (33%), Positives = 44/87 (50%), Gaps = 9/87 (10%)

Query: 123 KLHECDL--CGKNFSQRNNLKRHLEEVHRT-DGMK-FECYVCSKVLATSHSLKRHLLIHN 178
           + + C +  C + FSQ  +L RH     R   G K F+C +C +  + S  L  H+  H 
Sbjct: 3   RPYACPVESCDRRFSQSGSLTRH----IRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHT 58

Query: 179 GPK-YTCEICAKEFTRVYELNIHKKLH 204
           G K + C+IC ++F R  E   H K+H
Sbjct: 59  GEKPFACDICGRKFARSDERKRHTKIH 85

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C Length = 90

 Score = 63.6 bits (156), Expect = 9e-13
 Identities = 29/104 (27%), Positives = 45/104 (43%), Gaps = 31/104 (29%)

Query: 46  KRFKC--EQCDKRFSSNAELNKHSSAIHQRLKLHECDLCGKNFSQRNNLKRQANGSNVNN 103
           + + C  E CD+RFS +  L +H   IH   K  +C +C +NFS+ ++L           
Sbjct: 3   RPYACPVESCDRRFSQSGSLTRHIR-IHTGQKPFQCRICMRNFSRSDHLTT--------- 52

Query: 104 RFSSNAELNKHSSAIHQRL----KLHECDLCGKNFSQRNNLKRH 143
                          H R     K   CD+CG+ F++ +  KRH
Sbjct: 53  ---------------HIRTHTGEKPFACDICGRKFARSDERKRH 81

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C Length = 90

 Score = 60.6 bits (148), Expect = 1e-11
 Identities = 27/80 (33%), Positives = 38/80 (47%), Gaps = 6/80 (7%)

Query: 155 FECYV--CSKVLATSHSLKRHLLIHNGPK-YTCEICAKEFTRVYELNIHKKLHEDESVAN 211
           + C V  C +  + S SL RH+ IH G K + C IC + F+R   L  H + H  E    
Sbjct: 5   YACPVESCDRRFSQSGSLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGE---K 61

Query: 212 QLKCEFCGKVFLKKSNLKAH 231
              C+ CG+ F +    K H
Sbjct: 62  PFACDICGRKFARSDERKRH 81

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C Length = 90

 Score = 58.6 bits (143), Expect = 6e-11
 Identities = 32/115 (27%), Positives = 46/115 (40%), Gaps = 36/115 (31%)

Query: 75  KLHECDL--CGKNFSQRNNLKRQANGSNVNNRFSSNAELNKHSSAIHQRL----KLHECD 128
           + + C +  C + FSQ  +L R                        H R+    K  +C 
Sbjct: 3   RPYACPVESCDRRFSQSGSLTR------------------------HIRIHTGQKPFQCR 38

Query: 129 LCGKNFSQRNNLKRHLEEVHRT-DGMK-FECYVCSKVLATSHSLKRHLLIHNGPK 181
           +C +NFS+ ++L  H     RT  G K F C +C +  A S   KRH  IH   K
Sbjct: 39  ICMRNFSRSDHLTTH----IRTHTGEKPFACDICGRKFARSDERKRHTKIHLRQK 89

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C Length = 90

 Score = 56.7 bits (138), Expect = 2e-10
 Identities = 24/72 (33%), Positives = 37/72 (51%), Gaps = 3/72 (4%)

Query: 23 CYKVFESRENLMRHLKIHDDKESKRFKCEQCDKRFSSNAELNKHSSAIHQRLKLHECDLC 82
          C + F    +L RH++IH  +  K F+C  C + FS +  L  H    H   K   CD+C
Sbjct: 12 CDRRFSQSGSLTRHIRIHTGQ--KPFQCRICMRNFSRSDHLTTHIR-THTGEKPFACDIC 68

Query: 83 GKNFSQRNNLKR 94
          G+ F++ +  KR
Sbjct: 69 GRKFARSDERKR 80

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C Length = 90

 Score = 52.5 bits (127), Expect = 7e-09
 Identities = 32/129 (24%), Positives = 44/129 (34%), Gaps = 56/129 (43%)

Query: 668 CDKTFTRKDSLKKHIRIFHTQNQPQHTNVIEVALGARANAAFIDRIRCELCDKSFTRKDS 727
           CD+ F++  SL +HIRI HT  +P                      +C +C ++F+R D 
Sbjct: 12  CDRRFSQSGSLTRHIRI-HTGQKP---------------------FQCRICMRNFSRSDH 49

Query: 728 LKKHNRIFHGGADPKVMDEQMARGSADFLEVVLNEDGEGEPVSITNEILCKICNRTFTRN 787
           L  H R  H G  P                                   C IC R F R+
Sbjct: 50  LTTHIRT-HTGEKP---------------------------------FACDICGRKFARS 75

Query: 788 YNLKKHMKT 796
              K+H K 
Sbjct: 76  DERKRHTKI 84

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C Length = 90

 Score = 49.0 bits (118), Expect = 2e-07
 Identities = 20/70 (28%), Positives = 29/70 (41%), Gaps = 22/70 (31%)

Query: 665 CTLCDKTFTRKDSLKKHIRIFHTQNQPQHTNVIEVALGARANAAFIDRIRCELCDKSFTR 724
           C +C + F+R D L  HIR  HT  +P                       C++C + F R
Sbjct: 37  CRICMRNFSRSDHLTTHIRT-HTGEKP---------------------FACDICGRKFAR 74

Query: 725 KDSLKKHNRI 734
            D  K+H +I
Sbjct: 75  SDERKRHTKI 84

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C Length = 90

 Score = 45.5 bits (109), Expect = 2e-06
 Identities = 34/138 (24%), Positives = 51/138 (36%), Gaps = 63/138 (45%)

Query: 452 CLKTFAKKDSLKKHMKVFHTYISPDAIKEESGEGKPNILEVILQEGKVPNNNAIIQCRIC 511
           C + F++  SL +H+++ HT           G+ KP                   QCRIC
Sbjct: 12  CDRRFSQSGSLTRHIRI-HT-----------GQ-KPF------------------QCRIC 40

Query: 512 SKTFTRKDSLRKHMRRFHIINDTNVKKEFTEGQINRNMLDVILKESGHEIKSRIPCELCY 571
            + F+R D L  H+ R H    T  +K F                          C++C 
Sbjct: 41  MRNFSRSDHLTTHI-RTH----TG-EKPFA-------------------------CDICG 69

Query: 572 KTFTRKDSLRKHMKIFHT 589
           + F R D  ++H KI H 
Sbjct: 70  RKFARSDERKRHTKI-HL 86

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C Length = 90

 Score = 43.2 bits (103), Expect = 1e-05
 Identities = 13/47 (27%), Positives = 26/47 (55%), Gaps = 2/47 (4%)

Query: 20 CELCYKVFESRENLMRHLKIHDDKESKRFKCEQCDKRFSSNAELNKH 66
          C +C + F   ++L  H++ H  +  K F C+ C ++F+ + E  +H
Sbjct: 37 CRICMRNFSRSDHLTTHIRTHTGE--KPFACDICGRKFARSDERKRH 81

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C Length = 90

 Score = 42.8 bits (102), Expect = 2e-05
 Identities = 21/79 (26%), Positives = 31/79 (39%), Gaps = 31/79 (39%)

Query: 448 QCHICLKTFAKKDSLKKHMKVFHTYISPDAIKEESGEGKPNILEVILQEGKVPNNNAIIQ 507
           QC IC++ F++ D L  H++  HT           GE KP                    
Sbjct: 36  QCRICMRNFSRSDHLTTHIRT-HT-----------GE-KP------------------FA 64

Query: 508 CRICSKTFTRKDSLRKHMR 526
           C IC + F R D  ++H +
Sbjct: 65  CDICGRKFARSDERKRHTK 83

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C Length = 90

 Score = 40.5 bits (96), Expect = 1e-04
 Identities = 14/49 (28%), Positives = 22/49 (44%)

Query: 277 TCLICFKTFLTEVDLGKHMKMHMDDNQIQCRFCNKYFSRNYNLKQHMKT 325
            C IC + F     L  H++ H  +    C  C + F+R+   K+H K 
Sbjct: 36  QCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHTKI 84

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens} Length = 100

 Score = 65.7 bits (161), Expect = 2e-13
 Identities = 32/100 (32%), Positives = 50/100 (50%), Gaps = 11/100 (11%)

Query: 114 HSSAIHQRLKLHECDL--CGKNFSQRNNLKRHLEEVHRTD-GMK-FECYV--CSKVLATS 167
            S    ++ ++H CD   C K +++ ++LK HL    RT  G K ++C    C    A S
Sbjct: 5   SSGPDLEKRRIHYCDYPGCTKVYTKSSHLKAHL----RTHTGEKPYKCTWEGCDWRFARS 60

Query: 168 HSLKRHLLIHNGPK-YTCEICAKEFTRVYELNIHKKLHED 206
             L RH   H G K + C +C + F+R   L +H K H++
Sbjct: 61  DELTRHYRKHTGAKPFQCGVCNRSFSRSDHLALHMKRHQN 100

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens} Length = 100

 Score = 56.9 bits (138), Expect = 3e-10
 Identities = 27/102 (26%), Positives = 36/102 (35%), Gaps = 12/102 (11%)

Query: 134 FSQRNNLKRHLEEVHRTDGMKFECYVCSKVLATSHSLKRHLLIHNGPK-YTC--EICAKE 190
                        +H       +   C+KV   S  LK HL  H G K Y C  E C   
Sbjct: 3   SGSSGPDLEK-RRIHY-----CDYPGCTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWR 56

Query: 191 FTRVYELNIHKKLHEDESVANQLKCEFCGKVFLKKSNLKAHI 232
           F R  EL  H + H         +C  C + F +  +L  H+
Sbjct: 57  FARSDELTRHYRKHTGA---KPFQCGVCNRSFSRSDHLALHM 95

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens} Length = 100

 Score = 55.7 bits (135), Expect = 8e-10
 Identities = 27/81 (33%), Positives = 43/81 (53%), Gaps = 7/81 (8%)

Query: 18 HMCEL--CYKVFESRENLMRHLKIHDDKESKRFKC--EQCDKRFSSNAELNKHSSAIHQR 73
          H C+   C KV+    +L  HL+ H  +  K +KC  E CD RF+ + EL +H    H  
Sbjct: 16 HYCDYPGCTKVYTKSSHLKAHLRTHTGE--KPYKCTWEGCDWRFARSDELTRHYR-KHTG 72

Query: 74 LKLHECDLCGKNFSQRNNLKR 94
           K  +C +C ++FS+ ++L  
Sbjct: 73 AKPFQCGVCNRSFSRSDHLAL 93

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens} Length = 100

 Score = 50.7 bits (122), Expect = 5e-08
 Identities = 34/131 (25%), Positives = 45/131 (34%), Gaps = 58/131 (44%)

Query: 668 CDKTFTRKDSLKKHIRIFHTQNQPQHTNVIEVALGARANAAFIDRIRC--ELCDKSFTRK 725
           C K +T+   LK H+R  HT  +P                      +C  E CD  F R 
Sbjct: 23  CTKVYTKSSHLKAHLRT-HTGEKP---------------------YKCTWEGCDWRFARS 60

Query: 726 DSLKKHNRIFHGGADPKVMDEQMARGSADFLEVVLNEDGEGEPVSITNEILCKICNRTFT 785
           D L +H R  H GA P                                   C +CNR+F+
Sbjct: 61  DELTRHYRK-HTGAKPFQ---------------------------------CGVCNRSFS 86

Query: 786 RNYNLKKHMKT 796
           R+ +L  HMK 
Sbjct: 87  RSDHLALHMKR 97

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens} Length = 100

 Score = 50.7 bits (122), Expect = 5e-08
 Identities = 36/159 (22%), Positives = 49/159 (30%), Gaps = 67/159 (42%)

Query: 435 SGSTNNTQANKIIQCHI--CLKTFAKKDSLKKHMKVFHTYISPDAIKEESGEGKPNILEV 492
             S  + +  +I  C    C K + K   LK H++  HT           GE KP     
Sbjct: 4   GSSGPDLEKRRIHYCDYPGCTKVYTKSSHLKAHLRT-HT-----------GE-KP----- 45

Query: 493 ILQEGKVPNNNAIIQCRI--CSKTFTRKDSLRKHMRRFHIINDTNVKKEFTEGQINRNML 550
                         +C    C   F R D L +H R+ H    T  K             
Sbjct: 46  -------------YKCTWEGCDWRFARSDELTRHYRK-H----TGAK------------- 74

Query: 551 DVILKESGHEIKSRIPCELCYKTFTRKDSLRKHMKIFHT 589
                           C +C ++F+R D L  HMK  H 
Sbjct: 75  -------------PFQCGVCNRSFSRSDHLALHMKR-HQ 99

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens} Length = 100

 Score = 50.3 bits (121), Expect = 6e-08
 Identities = 28/122 (22%), Positives = 47/122 (38%), Gaps = 38/122 (31%)

Query: 66  HSSAIHQRLKLHECDL--CGKNFSQRNNLKRQANGSNVNNRFSSNAELNKHSSAIHQRL- 122
            S    ++ ++H CD   C K +++ ++LK                         H R  
Sbjct: 5   SSGPDLEKRRIHYCDYPGCTKVYTKSSHLK------------------------AHLRTH 40

Query: 123 ---KLHECDL--CGKNFSQRNNLKRHLEEVHRT-DGMK-FECYVCSKVLATSHSLKRHLL 175
              K ++C    C   F++ + L RH     R   G K F+C VC++  + S  L  H+ 
Sbjct: 41  TGEKPYKCTWEGCDWRFARSDELTRHY----RKHTGAKPFQCGVCNRSFSRSDHLALHMK 96

Query: 176 IH 177
            H
Sbjct: 97  RH 98

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens} Length = 100

 Score = 44.9 bits (107), Expect = 5e-06
 Identities = 31/140 (22%), Positives = 45/140 (32%), Gaps = 50/140 (35%)

Query: 191 FTRVYELNIHKKLHEDESVANQLKCEF--CGKVFLKKSNLKAHIENNHLD---YSCLECK 245
                     +++H          C++  C KV+ K S+LKAH+   H     Y C    
Sbjct: 3   SGSSGPDLEKRRIH---------YCDYPGCTKVYTKSSHLKAHLRT-HTGEKPYKC---- 48

Query: 246 AVGEEISFDTKKNLLLHLKTKHKNVISNVYLTCLICFKTFLTEVDLGKHMKMHMDDNQIQ 305
                                          T   C   F    +L +H + H      Q
Sbjct: 49  -------------------------------TWEGCDWRFARSDELTRHYRKHTGAKPFQ 77

Query: 306 CRFCNKYFSRNYNLKQHMKT 325
           C  CN+ FSR+ +L  HMK 
Sbjct: 78  CGVCNRSFSRSDHLALHMKR 97

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens} Length = 100

 Score = 41.1 bits (97), Expect = 9e-05
 Identities = 15/46 (32%), Positives = 21/46 (45%), Gaps = 2/46 (4%)

Query: 21 ELCYKVFESRENLMRHLKIHDDKESKRFKCEQCDKRFSSNAELNKH 66
          E C   F   + L RH + H     K F+C  C++ FS +  L  H
Sbjct: 51 EGCDWRFARSDELTRHYRKHTGA--KPFQCGVCNRSFSRSDHLALH 94

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 64.1 bits (157), Expect = 5e-13
 Identities = 22/69 (31%), Positives = 31/69 (44%), Gaps = 2/69 (2%)

Query: 169 SLKRHLLIHNGPK-YTCEICAKEFTRVYELNIHKKLHEDESVANQLKCEFCGKVFLKKSN 227
           S       H+G K Y C IC   FT+   + +H      E+VA +  C  C  V  +KS+
Sbjct: 2   SSGSSGRTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVA-KFHCPHCDTVIARKSD 60

Query: 228 LKAHIENNH 236
           L  H+   H
Sbjct: 61  LGVHLRKQH 69

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 58.7 bits (143), Expect = 4e-11
 Identities = 20/77 (25%), Positives = 27/77 (35%), Gaps = 20/77 (25%)

Query: 665 CTLCDKTFTRKDSLKKHIRIFHTQNQPQHTNVIEVALGARANAAFIDRIRCELCDKSFTR 724
           C +C   FT+  ++K HI   HT+N  +                      C  CD    R
Sbjct: 18  CYICHARFTQSGTMKMHILQKHTENVAKF--------------------HCPHCDTVIAR 57

Query: 725 KDSLKKHNRIFHGGADP 741
           K  L  H R  H  + P
Sbjct: 58  KSDLGVHLRKQHSYSGP 74

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 54.8 bits (133), Expect = 9e-10
 Identities = 20/72 (27%), Positives = 31/72 (43%), Gaps = 10/72 (13%)

Query: 139 NLKRHLEEVHRT-DGMK-FECYVCSKVLATSHSLKRHLLIHNG---PKYTCEICAKEFTR 193
           +         RT  G K +ECY+C      S ++K H+L  +     K+ C  C     R
Sbjct: 2   SSGSSG----RTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIAR 57

Query: 194 VYELNIH-KKLH 204
             +L +H +K H
Sbjct: 58  KSDLGVHLRKQH 69

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 54.5 bits (132), Expect = 1e-09
 Identities = 15/89 (16%), Positives = 26/89 (29%), Gaps = 34/89 (38%)

Query: 70  IHQRL----KLHECDLCGKNFSQRNNLKRQANGSNVNNRFSSNAELNKHSSAIHQR---- 121
              R     K +EC +C   F+Q   +K                         H      
Sbjct: 5   SSGRTHSGEKPYECYICHARFTQSGTMKM------------------------HILQKHT 40

Query: 122 --LKLHECDLCGKNFSQRNNLKRHLEEVH 148
             +    C  C    +++++L  HL + H
Sbjct: 41  ENVAKFHCPHCDTVIARKSDLGVHLRKQH 69

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 54.5 bits (132), Expect = 1e-09
 Identities = 10/65 (15%), Positives = 25/65 (38%), Gaps = 5/65 (7%)

Query: 32 NLMRHLKIHDDKESKRFKCEQCDKRFSSNAELNKHSSAIH--QRLKLHECDLCGKNFSQR 89
          +     + H  +  K ++C  C  RF+ +  +  H       + +    C  C    +++
Sbjct: 2  SSGSSGRTHSGE--KPYECYICHARFTQSGTMKMHIL-QKHTENVAKFHCPHCDTVIARK 58

Query: 90 NNLKR 94
          ++L  
Sbjct: 59 SDLGV 63

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 54.1 bits (131), Expect = 1e-09
 Identities = 11/52 (21%), Positives = 20/52 (38%)

Query: 20 CELCYKVFESRENLMRHLKIHDDKESKRFKCEQCDKRFSSNAELNKHSSAIH 71
          C +C+  F     +  H+     +   +F C  CD   +  ++L  H    H
Sbjct: 18 CYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVHLRKQH 69

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 52.1 bits (126), Expect = 8e-09
 Identities = 18/122 (14%), Positives = 28/122 (22%), Gaps = 54/122 (44%)

Query: 677 SLKKHIRIFHTQNQPQHTNVIEVALGARANAAFIDRIRCELCDKSFTRKDSLKKHNRIFH 736
           S     R  H+  +P                       C +C   FT+  ++K H    H
Sbjct: 2   SSGSSGRT-HSGEKP---------------------YECYICHARFTQSGTMKMHILQKH 39

Query: 737 GGADPKVMDEQMARGSADFLEVVLNEDGEGEPVSITNEILCKICNRTFTRNYNLKKHMKT 796
                K                                  C  C+    R  +L  H++ 
Sbjct: 40  TENVAKFH--------------------------------CPHCDTVIARKSDLGVHLRK 67

Query: 797 VH 798
            H
Sbjct: 68  QH 69

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 51.8 bits (125), Expect = 1e-08
 Identities = 15/83 (18%), Positives = 23/83 (27%), Gaps = 31/83 (37%)

Query: 448 QCHICLKTFAKKDSLKKHMKVFHTYISPDAIKEESGEG-KPNILEVILQEGKVPNNNAII 506
           +C+IC   F +  ++K H+                 E                       
Sbjct: 17  ECYICHARFTQSGTMKMHILQ-KH-----------TENVAK------------------F 46

Query: 507 QCRICSKTFTRKDSLRKHMRRFH 529
            C  C     RK  L  H+R+ H
Sbjct: 47  HCPHCDTVIARKSDLGVHLRKQH 69

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 49.1 bits (118), Expect = 9e-08
 Identities = 17/87 (19%), Positives = 28/87 (32%), Gaps = 29/87 (33%)

Query: 507 QCRICSKTFTRKDSLRKHMRRFHIINDTNVKKEFTEGQINRNMLDVILKESGHEIKSRIP 566
           +C IC   FT+  +++ H+ + H    T    +F                          
Sbjct: 17  ECYICHARFTQSGTMKMHILQKH----TENVAKFH------------------------- 47

Query: 567 CELCYKTFTRKDSLRKHMKIFHTRRNP 593
           C  C     RK  L  H++  H+   P
Sbjct: 48  CPHCDTVIARKSDLGVHLRKQHSYSGP 74

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 42.1 bits (100), Expect = 3e-05
 Identities = 11/51 (21%), Positives = 19/51 (37%), Gaps = 2/51 (3%)

Query: 277 TCLICFKTFLTEVDLGKHMKMHMDDNQ--IQCRFCNKYFSRNYNLKQHMKT 325
            C IC   F     +  H+     +N     C  C+   +R  +L  H++ 
Sbjct: 17  ECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVHLRK 67

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A Length = 89

 Score = 64.1 bits (157), Expect = 6e-13
 Identities = 28/91 (30%), Positives = 41/91 (45%), Gaps = 9/91 (9%)

Query: 119 HQRLKLHECDLCGKNFSQRNNLKRHLEEVHRTD-GMK-FECYV--CSKVLATSHSLKRHL 174
                  +   CGK +++ ++LK HL    RT  G K + C    C    A S  L RH 
Sbjct: 2   RTATHTCDYAGCGKTYTKSSHLKAHL----RTHTGEKPYHCDWDGCGWKFARSDELTRHY 57

Query: 175 LIHNGPK-YTCEICAKEFTRVYELNIHKKLH 204
             H G + + C+ C + F+R   L +H K H
Sbjct: 58  RKHTGHRPFQCQKCDRAFSRSDHLALHMKRH 88

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A Length = 89

 Score = 54.5 bits (132), Expect = 1e-09
 Identities = 20/90 (22%), Positives = 38/90 (42%), Gaps = 9/90 (10%)

Query: 7  EHIKSHEYVENHMCELCYKVFESRENLMRHLKIHDDKESKRFKC--EQCDKRFSSNAELN 64
          +   +H          C K +    +L  HL+ H  +  K + C  + C  +F+ + EL 
Sbjct: 1  KRTATHTC----DYAGCGKTYTKSSHLKAHLRTHTGE--KPYHCDWDGCGWKFARSDELT 54

Query: 65 KHSSAIHQRLKLHECDLCGKNFSQRNNLKR 94
          +H    H   +  +C  C + FS+ ++L  
Sbjct: 55 RHYR-KHTGHRPFQCQKCDRAFSRSDHLAL 83

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A Length = 89

 Score = 54.5 bits (132), Expect = 1e-09
 Identities = 24/81 (29%), Positives = 33/81 (40%), Gaps = 6/81 (7%)

Query: 154 KFECYVCSKVLATSHSLKRHLLIHNGPK-YTC--EICAKEFTRVYELNIHKKLHEDESVA 210
             +   C K    S  LK HL  H G K Y C  + C  +F R  EL  H + H      
Sbjct: 7   TCDYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKHTGH--- 63

Query: 211 NQLKCEFCGKVFLKKSNLKAH 231
              +C+ C + F +  +L  H
Sbjct: 64  RPFQCQKCDRAFSRSDHLALH 84

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A Length = 89

 Score = 52.5 bits (127), Expect = 7e-09
 Identities = 25/115 (21%), Positives = 41/115 (35%), Gaps = 36/115 (31%)

Query: 71  HQRLKLHECDLCGKNFSQRNNLKRQANGSNVNNRFSSNAELNKHSSAIHQRL----KLHE 126
                  +   CGK +++ ++LK                         H R     K + 
Sbjct: 2   RTATHTCDYAGCGKTYTKSSHLK------------------------AHLRTHTGEKPYH 37

Query: 127 CDL--CGKNFSQRNNLKRHLEEVHRT-DGMK-FECYVCSKVLATSHSLKRHLLIH 177
           CD   CG  F++ + L RH    +R   G + F+C  C +  + S  L  H+  H
Sbjct: 38  CDWDGCGWKFARSDELTRH----YRKHTGHRPFQCQKCDRAFSRSDHLALHMKRH 88

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A Length = 89

 Score = 50.2 bits (121), Expect = 5e-08
 Identities = 31/133 (23%), Positives = 42/133 (31%), Gaps = 54/133 (40%)

Query: 664 PCTLCDKTFTRKDSLKKHIRIFHTQNQPQHTNVIEVALGARANAAFIDRIRCELCDKSFT 723
               C KT+T+   LK H+R  HT  +P H +                      C   F 
Sbjct: 9   DYAGCGKTYTKSSHLKAHLRT-HTGEKPYHCDWDG-------------------CGWKFA 48

Query: 724 RKDSLKKHNRIFHGGADPKVMDEQMARGSADFLEVVLNEDGEGEPVSITNEILCKICNRT 783
           R D L +H R  H G  P                                   C+ C+R 
Sbjct: 49  RSDELTRHYRK-HTGHRPFQ---------------------------------CQKCDRA 74

Query: 784 FTRNYNLKKHMKT 796
           F+R+ +L  HMK 
Sbjct: 75  FSRSDHLALHMKR 87

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A Length = 89

 Score = 45.2 bits (108), Expect = 3e-06
 Identities = 32/144 (22%), Positives = 41/144 (28%), Gaps = 64/144 (44%)

Query: 445 KIIQCHICLKTFAKKDSLKKHMKVFHTYISPDAIKEESGEGKPNILEVILQEGKVPNNNA 504
                  C KT+ K   LK H++  HT           GE KP                 
Sbjct: 6   HTCDYAGCGKTYTKSSHLKAHLRT-HT-----------GE-KP----------------- 35

Query: 505 IIQCRI--CSKTFTRKDSLRKHMRRFHIINDTNVKKEFTEGQINRNMLDVILKESGHEIK 562
              C    C   F R D L +H R+ H    T  +                         
Sbjct: 36  -YHCDWDGCGWKFARSDELTRHYRK-H----TGHR------------------------- 64

Query: 563 SRIPCELCYKTFTRKDSLRKHMKI 586
               C+ C + F+R D L  HMK 
Sbjct: 65  -PFQCQKCDRAFSRSDHLALHMKR 87

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A Length = 89

 Score = 41.4 bits (98), Expect = 6e-05
 Identities = 14/44 (31%), Positives = 22/44 (50%), Gaps = 2/44 (4%)

Query: 23 CYKVFESRENLMRHLKIHDDKESKRFKCEQCDKRFSSNAELNKH 66
          C   F   + L RH + H     + F+C++CD+ FS +  L  H
Sbjct: 43 CGWKFARSDELTRHYRKHTGH--RPFQCQKCDRAFSRSDHLALH 84

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A Length = 89

 Score = 40.6 bits (96), Expect = 1e-04
 Identities = 27/115 (23%), Positives = 38/115 (33%), Gaps = 39/115 (33%)

Query: 214 KCEFCGKVFLKKSNLKAHIENNHLD---YSCLECKAVGEEISFDTKKNLLLHLKTKHKNV 270
               CGK + K S+LKAH+   H     Y C                             
Sbjct: 9   DYAGCGKTYTKSSHLKAHLRT-HTGEKPYHC----------------------------- 38

Query: 271 ISNVYLTCLICFKTFLTEVDLGKHMKMHMDDNQIQCRFCNKYFSRNYNLKQHMKT 325
                     C   F    +L +H + H      QC+ C++ FSR+ +L  HMK 
Sbjct: 39  ------DWDGCGWKFARSDELTRHYRKHTGHRPFQCQKCDRAFSRSDHLALHMKR 87

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus} Length = 82

 Score = 62.8 bits (154), Expect = 2e-12
 Identities = 30/73 (41%), Positives = 43/73 (58%), Gaps = 3/73 (4%)

Query: 20 CELCYKVFESRENLMRHLKIHDDKESKRFKCEQCDKRFSSNAELNKHSSAIHQRLKLHEC 79
          C++C K F+    L  HL IH D   + + C+ C KRF   +++ KH+  IH   K H+C
Sbjct: 4  CKICGKSFKRSSTLSTHLLIHSDT--RPYPCQYCGKRFHQKSDMKKHTF-IHTGEKPHKC 60

Query: 80 DLCGKNFSQRNNL 92
           +CGK FSQ +NL
Sbjct: 61 QVCGKAFSQSSNL 73

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus} Length = 82

 Score = 62.4 bits (153), Expect = 2e-12
 Identities = 29/100 (29%), Positives = 44/100 (44%), Gaps = 29/100 (29%)

Query: 48  FKCEQCDKRFSSNAELNKHSSAIHQRLKLHECDLCGKNFSQRNNLKRQANGSNVNNRFSS 107
           F C+ C K F  ++ L+ H   IH   + + C  CGK F Q++++K+             
Sbjct: 2   FDCKICGKSFKRSSTLSTHLL-IHSDTRPYPCQYCGKRFHQKSDMKK------------- 47

Query: 108 NAELNKHSSAIHQRL----KLHECDLCGKNFSQRNNLKRH 143
                      H  +    K H+C +CGK FSQ +NL  H
Sbjct: 48  -----------HTFIHTGEKPHKCQVCGKAFSQSSNLITH 76

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus} Length = 82

 Score = 58.2 bits (142), Expect = 5e-11
 Identities = 23/82 (28%), Positives = 38/82 (46%), Gaps = 7/82 (8%)

Query: 126 ECDLCGKNFSQRNNLKRHLEEVHRT-DGMK-FECYVCSKVLATSHSLKRHLLIHNGPK-Y 182
           +C +CGK+F + + L  H           + + C  C K       +K+H  IH G K +
Sbjct: 3   DCKICGKSFKRSSTLSTH----LLIHSDTRPYPCQYCGKRFHQKSDMKKHTFIHTGEKPH 58

Query: 183 TCEICAKEFTRVYELNIHKKLH 204
            C++C K F++   L  H + H
Sbjct: 59  KCQVCGKAFSQSSNLITHSRKH 80

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus} Length = 82

 Score = 55.1 bits (134), Expect = 9e-10
 Identities = 29/78 (37%), Positives = 41/78 (52%), Gaps = 4/78 (5%)

Query: 155 FECYVCSKVLATSHSLKRHLLIHNGPK-YTCEICAKEFTRVYELNIHKKLHEDESVANQL 213
           F+C +C K    S +L  HLLIH+  + Y C+ C K F +  ++  H  +H  E      
Sbjct: 2   FDCKICGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHTFIHTGE---KPH 58

Query: 214 KCEFCGKVFLKKSNLKAH 231
           KC+ CGK F + SNL  H
Sbjct: 59  KCQVCGKAFSQSSNLITH 76

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus} Length = 82

 Score = 54.0 bits (131), Expect = 2e-09
 Identities = 26/108 (24%), Positives = 43/108 (39%), Gaps = 34/108 (31%)

Query: 78  ECDLCGKNFSQRNNLKRQANGSNVNNRFSSNAELNKHSSAIHQRL----KLHECDLCGKN 133
           +C +CGK+F + + L                        + H  +    + + C  CGK 
Sbjct: 3   DCKICGKSFKRSSTL------------------------STHLLIHSDTRPYPCQYCGKR 38

Query: 134 FSQRNNLKRHLEEVHRT-DGMK-FECYVCSKVLATSHSLKRHLLIHNG 179
           F Q++++K+H         G K  +C VC K  + S +L  H   H G
Sbjct: 39  FHQKSDMKKH----TFIHTGEKPHKCQVCGKAFSQSSNLITHSRKHTG 82

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus} Length = 82

 Score = 42.0 bits (100), Expect = 3e-05
 Identities = 28/132 (21%), Positives = 44/132 (33%), Gaps = 56/132 (42%)

Query: 665 CTLCDKTFTRKDSLKKHIRIFHTQNQPQHTNVIEVALGARANAAFIDRIRCELCDKSFTR 724
           C +C K+F R  +L  H+ I H+  +P                       C+ C K F +
Sbjct: 4   CKICGKSFKRSSTLSTHLLI-HSDTRP---------------------YPCQYCGKRFHQ 41

Query: 725 KDSLKKHNRIFHGGADPKVMDEQMARGSADFLEVVLNEDGEGEPVSITNEILCKICNRTF 784
           K  +KKH  I H G  P                                   C++C + F
Sbjct: 42  KSDMKKHTFI-HTGEKPHK---------------------------------CQVCGKAF 67

Query: 785 TRNYNLKKHMKT 796
           +++ NL  H + 
Sbjct: 68  SQSSNLITHSRK 79

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus} Length = 82

 Score = 38.9 bits (92), Expect = 4e-04
 Identities = 16/47 (34%), Positives = 25/47 (53%), Gaps = 2/47 (4%)

Query: 20 CELCYKVFESRENLMRHLKIHDDKESKRFKCEQCDKRFSSNAELNKH 66
          C+ C K F  + ++ +H  IH  +  K  KC+ C K FS ++ L  H
Sbjct: 32 CQYCGKRFHQKSDMKKHTFIHTGE--KPHKCQVCGKAFSQSSNLITH 76

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 78

 Score = 61.7 bits (150), Expect = 4e-12
 Identities = 20/68 (29%), Positives = 28/68 (41%), Gaps = 1/68 (1%)

Query: 18 HMCELCYKVFESRENLMRHLKIHDDKES-KRFKCEQCDKRFSSNAELNKHSSAIHQRLKL 76
            CE+C      + +L  H + H +  +  RF CE C KRF     +  H S  H  L L
Sbjct: 8  LQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKSHPALLL 67

Query: 77 HECDLCGK 84
             +  G 
Sbjct: 68 APQESSGP 75

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 78

 Score = 61.3 bits (149), Expect = 5e-12
 Identities = 21/67 (31%), Positives = 31/67 (46%)

Query: 182 YTCEICAKEFTRVYELNIHKKLHEDESVANQLKCEFCGKVFLKKSNLKAHIENNHLDYSC 241
             CEIC     +   LN H++ H +   A +  CEFCGK F K  ++ AH   +H     
Sbjct: 8   LQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKSHPALLL 67

Query: 242 LECKAVG 248
              ++ G
Sbjct: 68  APQESSG 74

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 78

 Score = 59.3 bits (144), Expect = 2e-11
 Identities = 20/78 (25%), Positives = 25/78 (32%), Gaps = 19/78 (24%)

Query: 665 CTLCDKTFTRKDSLKKHIRIFHTQNQPQHTNVIEVALGARANAAFIDRIRCELCDKSFTR 724
           C +C  T  +K SL  H R  H +              A        R  CE C K F +
Sbjct: 10  CEICGFTCRQKASLNWHQRK-HAETV-----------AAL-------RFPCEFCGKRFEK 50

Query: 725 KDSLKKHNRIFHGGADPK 742
            DS+  H    H      
Sbjct: 51  PDSVAAHRSKSHPALLLA 68

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 78

 Score = 55.9 bits (135), Expect = 4e-10
 Identities = 15/73 (20%), Positives = 22/73 (30%), Gaps = 5/73 (6%)

Query: 123 KLHECDLCGKNFSQRNNLKRHLEEVH-RTDGMK-FECYVCSKVLATSHSLKRHLLIHNGP 180
              +C++CG    Q+ +L  H    H  T     F C  C K      S+  H    +  
Sbjct: 6   SGLQCEICGFTCRQKASLNWHQR-KHAETVAALRFPCEFCGKRFEKPDSVAAHRSKSHPA 64

Query: 181 K--YTCEICAKEF 191
                 E      
Sbjct: 65  LLLAPQESSGPSS 77

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 78

 Score = 55.5 bits (134), Expect = 6e-10
 Identities = 19/82 (23%), Positives = 24/82 (29%), Gaps = 28/82 (34%)

Query: 448 QCHICLKTFAKKDSLKKHMKVFHTYISPDAIKEESGEGKPNILEVILQEGKVPNNNAIIQ 507
           QC IC  T  +K SL  H +  H         E                           
Sbjct: 9   QCEICGFTCRQKASLNWHQRK-HA--------ETVAA-LR------------------FP 40

Query: 508 CRICSKTFTRKDSLRKHMRRFH 529
           C  C K F + DS+  H  + H
Sbjct: 41  CEFCGKRFEKPDSVAAHRSKSH 62

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 78

 Score = 54.7 bits (132), Expect = 9e-10
 Identities = 22/87 (25%), Positives = 27/87 (31%), Gaps = 28/87 (32%)

Query: 507 QCRICSKTFTRKDSLRKHMRRFHIINDTNVKKEFTEGQINRNMLDVILKESGHEIKSRIP 566
           QC IC  T  +K SL  H R+ H   +T     F                          
Sbjct: 9   QCEICGFTCRQKASLNWHQRK-H--AETVAALRFP------------------------- 40

Query: 567 CELCYKTFTRKDSLRKHMKIFHTRRNP 593
           CE C K F + DS+  H    H     
Sbjct: 41  CEFCGKRFEKPDSVAAHRSKSHPALLL 67

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 78

 Score = 53.6 bits (129), Expect = 2e-09
 Identities = 15/81 (18%), Positives = 26/81 (32%), Gaps = 31/81 (38%)

Query: 75  KLHECDLCGKNFSQRNNLKRQANGSNVNNRFSSNAELNKHSSAIHQRL-------KLHEC 127
              +C++CG    Q+ +L                          HQR            C
Sbjct: 6   SGLQCEICGFTCRQKASLN------------------------WHQRKHAETVAALRFPC 41

Query: 128 DLCGKNFSQRNNLKRHLEEVH 148
           + CGK F + +++  H  + H
Sbjct: 42  EFCGKRFEKPDSVAAHRSKSH 62

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 78

 Score = 51.6 bits (124), Expect = 1e-08
 Identities = 13/52 (25%), Positives = 19/52 (36%), Gaps = 4/52 (7%)

Query: 46 KRFKCEQCDKRFSSNAELNKHSSAIHQRL---KLHECDLCGKNFSQRNNLKR 94
             +CE C       A LN H    H          C+ CGK F + +++  
Sbjct: 6  SGLQCEICGFTCRQKASLNWHQR-KHAETVAALRFPCEFCGKRFEKPDSVAA 56

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 78

 Score = 46.2 bits (110), Expect = 1e-06
 Identities = 14/85 (16%), Positives = 23/85 (27%), Gaps = 31/85 (36%)

Query: 714 RCELCDKSFTRKDSLKKHNRIFHGGADPKVMDEQMARGSADFLEVVLNEDGEGEPVSITN 773
           +CE+C  +  +K SL  H R  H                                     
Sbjct: 9   QCEICGFTCRQKASLNWHQRK-HA-----------------------ETVAA-------L 37

Query: 774 EILCKICNRTFTRNYNLKKHMKTVH 798
              C+ C + F +  ++  H    H
Sbjct: 38  RFPCEFCGKRFEKPDSVAAHRSKSH 62

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 78

 Score = 45.5 bits (108), Expect = 2e-06
 Identities = 14/53 (26%), Positives = 21/53 (39%), Gaps = 3/53 (5%)

Query: 276 LTCLICFKTFLTEVDLGKHMKMHMDDN---QIQCRFCNKYFSRNYNLKQHMKT 325
           L C IC  T   +  L  H + H +     +  C FC K F +  ++  H   
Sbjct: 8   LQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSK 60

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 78

 Score = 41.2 bits (97), Expect = 5e-05
 Identities = 9/29 (31%), Positives = 11/29 (37%)

Query: 664 PCTLCDKTFTRKDSLKKHIRIFHTQNQPQ 692
           PC  C K F + DS+  H    H      
Sbjct: 40  PCEFCGKRFEKPDSVAAHRSKSHPALLLA 68

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 86

 Score = 59.8 bits (146), Expect = 2e-11
 Identities = 20/88 (22%), Positives = 26/88 (29%), Gaps = 15/88 (17%)

Query: 115 SSAIHQRL----KLHECDLCGKNFSQRNNLKRHLEEVHRT-----DGMK-FECYVCSKVL 164
           SS    R     K + C  C K F Q+  L  H     +           F C  C K  
Sbjct: 2   SSGSSGRTHTGEKPYACSHCDKTFRQKQLLDMH----FKRYHDPNFVPAAFVCSKCGKTF 57

Query: 165 ATSHSLKRHLLIHNGPK-YTCEICAKEF 191
              +++ RH     GP     E      
Sbjct: 58  TRRNTMARHADNCAGPDGVEGENSGPSS 85

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 86

 Score = 56.8 bits (138), Expect = 2e-10
 Identities = 20/111 (18%), Positives = 31/111 (27%), Gaps = 35/111 (31%)

Query: 32  NLMRHLKIHDDKESKRFKCEQCDKRFSSNAELNKHSSAIH----QRLKLHECDLCGKNFS 87
           +     + H  +  K + C  CDK F     L+ H    +           C  CGK F+
Sbjct: 2   SSGSSGRTHTGE--KPYACSHCDKTFRQKQLLDMHFK-RYHDPNFVPAAFVCSKCGKTFT 58

Query: 88  QRNNLKRQANGSNVNNRFSSNAELNKHSSAIHQRL----KLHECDLCGKNF 134
           +RN + R                        H          E +  G + 
Sbjct: 59  RRNTMAR------------------------HADNCAGPDGVEGENSGPSS 85

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 86

 Score = 54.5 bits (132), Expect = 2e-09
 Identities = 15/69 (21%), Positives = 26/69 (37%), Gaps = 3/69 (4%)

Query: 20 CELCYKVFESRENLMRHLKIH--DDKESKRFKCEQCDKRFSSNAELNKHSSAIHQRLKLH 77
          C  C K F  ++ L  H K +   +     F C +C K F+    + +H+          
Sbjct: 18 CSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRNTMARHAD-NCAGPDGV 76

Query: 78 ECDLCGKNF 86
          E +  G + 
Sbjct: 77 EGENSGPSS 85

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 86

 Score = 53.7 bits (130), Expect = 3e-09
 Identities = 21/86 (24%), Positives = 32/86 (37%), Gaps = 7/86 (8%)

Query: 169 SLKRHLLIHNGPK-YTCEICAKEFTRVYELNIHKKLHEDESVANQ-LKCEFCGKVFLKKS 226
           S       H G K Y C  C K F +   L++H K + D +       C  CGK F +++
Sbjct: 2   SSGSSGRTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRN 61

Query: 227 NLKAHIENNHLD---YSCLEC-KAVG 248
            +  H  +N              + G
Sbjct: 62  TMARH-ADNCAGPDGVEGENSGPSSG 86

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 86

 Score = 44.4 bits (106), Expect = 4e-06
 Identities = 21/77 (27%), Positives = 32/77 (41%), Gaps = 19/77 (24%)

Query: 665 CTLCDKTFTRKDSLKKHIRIFHTQNQPQHTNVIEVALGARANAAFIDRIRCELCDKSFTR 724
           C+ CDKTF +K  L  H +         + +           AAF     C  C K+FTR
Sbjct: 18  CSHCDKTFRQKQLLDMHFKR--------YHD------PNFVPAAF----VCSKCGKTFTR 59

Query: 725 KDSLKKHNRIFHGGADP 741
           ++++ +H      G D 
Sbjct: 60  RNTMARHADN-CAGPDG 75

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 86

 Score = 40.6 bits (96), Expect = 1e-04
 Identities = 17/79 (21%), Positives = 26/79 (32%), Gaps = 27/79 (34%)

Query: 448 QCHICLKTFAKKDSLKKHMKVFHTYISPDAIKEESGEGKPNILEVILQEGKVPNNNAIIQ 507
            C  C KTF +K  L  H K  +         + +                         
Sbjct: 17  ACSHCDKTFRQKQLLDMHFKR-YH--------DPNFVPAA------------------FV 49

Query: 508 CRICSKTFTRKDSLRKHMR 526
           C  C KTFTR++++ +H  
Sbjct: 50  CSKCGKTFTRRNTMARHAD 68

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 86

 Score = 39.0 bits (92), Expect = 4e-04
 Identities = 20/83 (24%), Positives = 29/83 (34%), Gaps = 28/83 (33%)

Query: 507 QCRICSKTFTRKDSLRKHMRRFHIINDTNVKKEFTEGQINRNMLDVILKESGHEIKSRIP 566
            C  C KTF +K  L  H +R+H  +   V   F                          
Sbjct: 17  ACSHCDKTFRQKQLLDMHFKRYH--DPNFVPAAFV------------------------- 49

Query: 567 CELCYKTFTRKDSLRKHMKIFHT 589
           C  C KTFTR++++ +H      
Sbjct: 50  CSKCGKTFTRRNTMARHADN-CA 71

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 86

 Score = 38.7 bits (91), Expect = 6e-04
 Identities = 17/55 (30%), Positives = 23/55 (41%), Gaps = 4/55 (7%)

Query: 277 TCLICFKTFLTEVDLGKHMKMHMDDNQI----QCRFCNKYFSRNYNLKQHMKTCT 327
            C  C KTF  +  L  H K + D N +     C  C K F+R   + +H   C 
Sbjct: 17  ACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRNTMARHADNCA 71

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 79

 Score = 56.4 bits (137), Expect = 3e-10
 Identities = 22/75 (29%), Positives = 28/75 (37%), Gaps = 8/75 (10%)

Query: 123 KLHECDL--CGKNFSQRNNLKRHLEEVHRTDGMK-FEC--YVCSKVLATSHSLKRHLLIH 177
               CD   CG+ FS R  L  H +  H     K F C    C K       LK H+ +H
Sbjct: 6   SGMPCDFPGCGRIFSNRQYLNHHKKYQHI--HQKSFSCPEPACGKSFNFKKHLKEHMKLH 63

Query: 178 NGPK-YTCEICAKEF 191
           +  + Y CE      
Sbjct: 64  SDTRDYICEFSGPSS 78

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 79

 Score = 48.7 bits (117), Expect = 1e-07
 Identities = 17/69 (24%), Positives = 30/69 (43%), Gaps = 4/69 (5%)

Query: 20 CELCYKVFESRENLMRHLKIHDDKESKRFKCEQ--CDKRFSSNAELNKHSSAIHQRLKLH 77
             C ++F +R+ L  H K     + K F C +  C K F+    L +H   +H   + +
Sbjct: 12 FPGCGRIFSNRQYLNHHKKYQHIHQ-KSFSCPEPACGKSFNFKKHLKEHMK-LHSDTRDY 69

Query: 78 ECDLCGKNF 86
           C+  G + 
Sbjct: 70 ICEFSGPSS 78

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 79

 Score = 46.4 bits (111), Expect = 8e-07
 Identities = 20/97 (20%), Positives = 31/97 (31%), Gaps = 32/97 (32%)

Query: 46  KRFKC--EQCDKRFSSNAELNKHSSAIHQRLKLHECD--LCGKNFSQRNNLKRQANGSNV 101
               C    C + FS+   LN H    H   K   C    CGK+F+ + +LK        
Sbjct: 6   SGMPCDFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKE------- 58

Query: 102 NNRFSSNAELNKHSSAIHQRL----KLHECDLCGKNF 134
                            H +L    + + C+  G + 
Sbjct: 59  -----------------HMKLHSDTRDYICEFSGPSS 78

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 79

 Score = 46.0 bits (110), Expect = 1e-06
 Identities = 16/75 (21%), Positives = 24/75 (32%), Gaps = 25/75 (33%)

Query: 664 PCTL--CDKTFTRKDSLKKHIRIFHTQNQPQHTNVIEVALGARANAAFIDRIRCE--LCD 719
           PC    C + F+ +  L  H +  H   +                        C    C 
Sbjct: 9   PCDFPGCGRIFSNRQYLNHHKKYQHIHQKS---------------------FSCPEPACG 47

Query: 720 KSFTRKDSLKKHNRI 734
           KSF  K  LK+H ++
Sbjct: 48  KSFNFKKHLKEHMKL 62

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 79

 Score = 39.8 bits (94), Expect = 2e-04
 Identities = 24/82 (29%), Positives = 31/82 (37%), Gaps = 14/82 (17%)

Query: 177 HNGPK-YTCEI--CAKEFTRVYELNIHKKL-HEDESVANQLKCEF--CGKVFLKKSNLKA 230
            +G     C+   C + F+    LN HKK  H  +       C    CGK F  K +LK 
Sbjct: 2   SSGSSGMPCDFPGCGRIFSNRQYLNHHKKYQHIHQK---SFSCPEPACGKSFNFKKHLKE 58

Query: 231 HIENNHLD---YSCLEC-KAVG 248
           H    H D   Y C     + G
Sbjct: 59  H-MKLHSDTRDYICEFSGPSSG 79

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1 Length = 66

 Score = 55.6 bits (135), Expect = 4e-10
 Identities = 11/57 (19%), Positives = 24/57 (42%)

Query: 123 KLHECDLCGKNFSQRNNLKRHLEEVHRTDGMKFECYVCSKVLATSHSLKRHLLIHNG 179
             + C +C + ++  +N  RH    H+ +   + C  C K      ++  H+ I + 
Sbjct: 9   HTYRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKIIHK 65

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1 Length = 66

 Score = 53.7 bits (130), Expect = 2e-09
 Identities = 18/73 (24%), Positives = 26/73 (35%), Gaps = 20/73 (27%)

Query: 665 CTLCDKTFTRKDSLKKHIRIFHTQNQPQHTNVIEVALGARANAAFIDRIRCELCDKSFTR 724
           C +C + +T   +  +H    H        NV                  C  C K FTR
Sbjct: 13  CKVCSRVYTHISNFCRHYVTSH------KRNV--------------KVYPCPFCFKEFTR 52

Query: 725 KDSLKKHNRIFHG 737
           KD++  H +I H 
Sbjct: 53  KDNMTAHVKIIHK 65

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1 Length = 66

 Score = 53.3 bits (129), Expect = 2e-09
 Identities = 12/81 (14%), Positives = 27/81 (33%), Gaps = 30/81 (37%)

Query: 75  KLHECDLCGKNFSQRNNLKRQANGSNVNNRFSSNAELNKHSSAIHQRLKLH------ECD 128
             + C +C + ++  +N  R                        H             C 
Sbjct: 9   HTYRCKVCSRVYTHISNFCR------------------------HYVTSHKRNVKVYPCP 44

Query: 129 LCGKNFSQRNNLKRHLEEVHR 149
            C K F++++N+  H++ +H+
Sbjct: 45  FCFKEFTRKDNMTAHVKIIHK 65

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1 Length = 66

 Score = 52.6 bits (127), Expect = 3e-09
 Identities = 9/50 (18%), Positives = 28/50 (56%), Gaps = 1/50 (2%)

Query: 46 KRFKCEQCDKRFSSNAELNKHS-SAIHQRLKLHECDLCGKNFSQRNNLKR 94
            ++C+ C + ++  +   +H  ++  + +K++ C  C K F++++N+  
Sbjct: 9  HTYRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTA 58

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1 Length = 66

 Score = 50.6 bits (122), Expect = 2e-08
 Identities = 14/53 (26%), Positives = 23/53 (43%)

Query: 20 CELCYKVFESRENLMRHLKIHDDKESKRFKCEQCDKRFSSNAELNKHSSAIHQ 72
          C++C +V+    N  RH      +  K + C  C K F+    +  H   IH+
Sbjct: 13 CKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKIIHK 65

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1 Length = 66

 Score = 48.7 bits (117), Expect = 9e-08
 Identities = 16/88 (18%), Positives = 26/88 (29%), Gaps = 34/88 (38%)

Query: 714 RCELCDKSFTRKDSLKKHNRIF-HGGADPKVMDEQMARGSADFLEVVLNEDGEGEPVSIT 772
           RC++C + +T   +  +H                                          
Sbjct: 12  RCKVCSRVYTHISNFCRHYVTSHKRNVKVYP----------------------------- 42

Query: 773 NEILCKICNRTFTRNYNLKKHMKTVHKI 800
               C  C + FTR  N+  H+K +HKI
Sbjct: 43  ----CPFCFKEFTRKDNMTAHVKIIHKI 66

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1 Length = 66

 Score = 47.2 bits (113), Expect = 3e-07
 Identities = 21/82 (25%), Positives = 33/82 (40%), Gaps = 29/82 (35%)

Query: 507 QCRICSKTFTRKDSLRKHMRRFHIINDTNVKKEFTEGQINRNMLDVILKESGHEIKSRIP 566
           +C++CS+ +T   +  +H       +  NVK                            P
Sbjct: 12  RCKVCSRVYTHISNFCRHYV---TSHKRNVKV--------------------------YP 42

Query: 567 CELCYKTFTRKDSLRKHMKIFH 588
           C  C+K FTRKD++  H+KI H
Sbjct: 43  CPFCFKEFTRKDNMTAHVKIIH 64

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1 Length = 66

 Score = 44.1 bits (105), Expect = 4e-06
 Identities = 15/82 (18%), Positives = 25/82 (30%), Gaps = 29/82 (35%)

Query: 448 QCHICLKTFAKKDSLKKHMKVFHTYISPDAIKEESGEGKPNILEVILQEGKVPNNNAIIQ 507
           +C +C + +    +  +H    H               K                     
Sbjct: 12  RCKVCSRVYTHISNFCRHYVTSHK----------RNV-KV------------------YP 42

Query: 508 CRICSKTFTRKDSLRKHMRRFH 529
           C  C K FTRKD++  H++  H
Sbjct: 43  CPFCFKEFTRKDNMTAHVKIIH 64

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1 Length = 66

 Score = 43.7 bits (104), Expect = 5e-06
 Identities = 17/64 (26%), Positives = 28/64 (43%), Gaps = 6/64 (9%)

Query: 176 IHNGPK-YTCEICAKEFTRVYELNIHK--KLHEDESVANQLKCEFCGKVFLKKSNLKAHI 232
              G   Y C++C++ +T +     H       +  V     C FC K F +K N+ AH+
Sbjct: 4   TKEGEHTYRCKVCSRVYTHISNFCRHYVTSHKRNVKV---YPCPFCFKEFTRKDNMTAHV 60

Query: 233 ENNH 236
           +  H
Sbjct: 61  KIIH 64

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1 Length = 66

 Score = 41.4 bits (98), Expect = 3e-05
 Identities = 17/59 (28%), Positives = 24/59 (40%), Gaps = 9/59 (15%)

Query: 214 KCEFCGKVFLKKSNLKAHIENNHLD----YSCLECKAVGEEISFDTKKNLLLHLKTKHK 268
           +C+ C +V+   SN   H   +H      Y C  C        F  K N+  H+K  HK
Sbjct: 12  RCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFC-----FKEFTRKDNMTAHVKIIHK 65

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1 Length = 66

 Score = 39.8 bits (94), Expect = 1e-04
 Identities = 12/51 (23%), Positives = 21/51 (41%), Gaps = 2/51 (3%)

Query: 277 TCLICFKTFLTEVDLGKHM--KMHMDDNQIQCRFCNKYFSRNYNLKQHMKT 325
            C +C + +    +  +H       +     C FC K F+R  N+  H+K 
Sbjct: 12  RCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKI 62

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A Length = 85

 Score = 54.5 bits (132), Expect = 1e-09
 Identities = 22/87 (25%), Positives = 31/87 (35%), Gaps = 8/87 (9%)

Query: 155 FECYV--CSKVLATSHSLKRHLLIHNGPK-YTC--EICAKEFTRVYELNIHKKLHEDESV 209
           + C+   C K     + LK H   H     Y C  E C K F+    L  H+K+H     
Sbjct: 2   YVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAGYPC 61

Query: 210 ANQLKCEFCGKVFLKKSNLKAHIENNH 236
               K + C  V    +    H+   H
Sbjct: 62  K---KDDSCSFVGKTWTLYLKHVAECH 85

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A Length = 85

 Score = 51.1 bits (123), Expect = 2e-08
 Identities = 24/91 (26%), Positives = 34/91 (37%), Gaps = 16/91 (17%)

Query: 124 LHECDL--CGKNFSQRNNLKRHLEEVHRT-DGMK-FEC--YVCSKVLATSHSLKRHLLIH 177
           ++ C    CGK F + N LK H      +      +EC    C K  +    LKRH  +H
Sbjct: 1   MYVCHFENCGKAFKKHNQLKVHQ----FSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVH 56

Query: 178 NGPK----YTCEICAKEFTRVYELNIHKKLH 204
            G       +C    K +T    L    + H
Sbjct: 57  AGYPCKKDDSCSFVGKTWTLY--LKHVAECH 85

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A Length = 85

 Score = 45.7 bits (109), Expect = 2e-06
 Identities = 19/78 (24%), Positives = 28/78 (35%), Gaps = 5/78 (6%)

Query: 20 CELCYKVFESRENLMRHLKIHDDKESKRFKCEQ--CDKRFSSNAELNKHSSAIHQRLKLH 77
           E C K F+    L  H   H  +    ++C    CDKRFS  + L +H   +H      
Sbjct: 6  FENCGKAFKKHNQLKVHQFSHTQQ--LPYECPHEGCDKRFSLPSRLKRH-EKVHAGYPCK 62

Query: 78 ECDLCGKNFSQRNNLKRQ 95
          + D C           + 
Sbjct: 63 KDDSCSFVGKTWTLYLKH 80

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A Length = 85

 Score = 44.5 bits (106), Expect = 4e-06
 Identities = 22/105 (20%), Positives = 32/105 (30%), Gaps = 31/105 (29%)

Query: 50  CEQCDKRFSSNAELNKHSSAIHQRLKLHECD--LCGKNFSQRNNLKRQANGSNVNNRFSS 107
            E C K F  + +L  H    H +   +EC    C K FS  + LKR             
Sbjct: 6   FENCGKAFKKHNQLKVHQF-SHTQQLPYECPHEGCDKRFSLPSRLKR------------- 51

Query: 108 NAELNKHSSAIHQR----LKLHECDLCGKNFSQRNNLKRHLEEVH 148
                      H++        + D C           +H+ E H
Sbjct: 52  -----------HEKVHAGYPCKKDDSCSFVGKTWTLYLKHVAECH 85

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A Length = 85

 Score = 44.5 bits (106), Expect = 4e-06
 Identities = 26/137 (18%), Positives = 34/137 (24%), Gaps = 58/137 (42%)

Query: 664 PCTLCDKTFTRKDSLKKHIRIFHTQNQPQHTNVIEVALGARANAAFIDRIRC--ELCDKS 721
               C K F + + LK H    HTQ  P                       C  E CDK 
Sbjct: 5   HFENCGKAFKKHNQLKVHQFS-HTQQLP---------------------YECPHEGCDKR 42

Query: 722 FTRKDSLKKHNRIFHGGADPKVMDEQMARGSADFLEVVLNEDGEGEPVSITNEILCKICN 781
           F+    LK+H ++ H G   K                                     C+
Sbjct: 43  FSLPSRLKRHEKV-HAGYPCKK---------------------------------DDSCS 68

Query: 782 RTFTRNYNLKKHMKTVH 798
                     KH+   H
Sbjct: 69  FVGKTWTLYLKHVAECH 85

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A Length = 85

 Score = 39.9 bits (94), Expect = 2e-04
 Identities = 18/74 (24%), Positives = 24/74 (32%), Gaps = 12/74 (16%)

Query: 6  SEHIKSHE--------YVENHMCELCYKVFESRENLMRHLKIHDDKESKRFKCEQCDKRF 57
             +K H+        Y   H  E C K F     L RH K+H        K + C    
Sbjct: 16 HNQLKVHQFSHTQQLPYECPH--EGCDKRFSLPSRLKRHEKVH--AGYPCKKDDSCSFVG 71

Query: 58 SSNAELNKHSSAIH 71
           +     KH +  H
Sbjct: 72 KTWTLYLKHVAECH 85

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens} Length = 74

 Score = 53.6 bits (130), Expect = 2e-09
 Identities = 20/66 (30%), Positives = 27/66 (40%), Gaps = 4/66 (6%)

Query: 167 SHSLKRHLLIHNGPK-YTCEICAKEFTRVYELNIHKKLHEDESVANQLKCEFCGKVFLKK 225
            H    H  + +  K Y C+ C   F     L  HK +H  E      +C  CG  F + 
Sbjct: 2   GHHHHHHSHMTHSDKPYKCDRCQASFRYKGNLASHKTVHTGE---KPYRCNICGAQFNRP 58

Query: 226 SNLKAH 231
           +NLK H
Sbjct: 59  ANLKTH 64

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens} Length = 74

 Score = 50.1 bits (121), Expect = 3e-08
 Identities = 17/63 (26%), Positives = 29/63 (46%), Gaps = 3/63 (4%)

Query: 32 NLMRHLKIHDDKESKRFKCEQCDKRFSSNAELNKHSSAIHQRLKLHECDLCGKNFSQRNN 91
          +   H  +      K +KC++C   F     L  H + +H   K + C++CG  F++  N
Sbjct: 4  HHHHHSHMTHSD--KPYKCDRCQASFRYKGNLASHKT-VHTGEKPYRCNICGAQFNRPAN 60

Query: 92 LKR 94
          LK 
Sbjct: 61 LKT 63

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens} Length = 74

 Score = 49.0 bits (118), Expect = 8e-08
 Identities = 19/83 (22%), Positives = 31/83 (37%), Gaps = 32/83 (38%)

Query: 69  AIHQRL----KLHECDLCGKNFSQRNNLKRQANGSNVNNRFSSNAELNKHSSAIHQRL-- 122
             H  +    K ++CD C  +F  + NL                        A H+ +  
Sbjct: 6   HHHSHMTHSDKPYKCDRCQASFRYKGNL------------------------ASHKTVHT 41

Query: 123 --KLHECDLCGKNFSQRNNLKRH 143
             K + C++CG  F++  NLK H
Sbjct: 42  GEKPYRCNICGAQFNRPANLKTH 64

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens} Length = 74

 Score = 49.0 bits (118), Expect = 1e-07
 Identities = 22/93 (23%), Positives = 31/93 (33%), Gaps = 35/93 (37%)

Query: 117 AIHQRL----KLHECDLCGKNFSQRNNLKRHLEEVHRTDGMKFECYVCSKVLATSHSLKR 172
             H  +    K ++CD C  +F  + NL  H                           K 
Sbjct: 6   HHHSHMTHSDKPYKCDRCQASFRYKGNLASH---------------------------KT 38

Query: 173 HLLIHNGPK-YTCEICAKEFTRVYELNIHKKLH 204
              +H G K Y C IC  +F R   L  H ++H
Sbjct: 39  ---VHTGEKPYRCNICGAQFNRPANLKTHTRIH 68

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens} Length = 74

 Score = 42.8 bits (102), Expect = 2e-05
 Identities = 21/74 (28%), Positives = 27/74 (36%), Gaps = 23/74 (31%)

Query: 665 CTLCDKTFTRKDSLKKHIRIFHTQNQPQHTNVIEVALGARANAAFIDRIRCELCDKSFTR 724
           C  C  +F  K +L  H  + HT  +P                      RC +C   F R
Sbjct: 20  CDRCQASFRYKGNLASHKTV-HTGEKP---------------------YRCNICGAQFNR 57

Query: 725 KDSLKKHNRIFHGG 738
             +LK H RI H G
Sbjct: 58  PANLKTHTRI-HSG 70

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens} Length = 74

 Score = 42.1 bits (100), Expect = 2e-05
 Identities = 14/47 (29%), Positives = 22/47 (46%), Gaps = 2/47 (4%)

Query: 20 CELCYKVFESRENLMRHLKIHDDKESKRFKCEQCDKRFSSNAELNKH 66
          C+ C   F  + NL  H  +H  +  K ++C  C  +F+  A L  H
Sbjct: 20 CDRCQASFRYKGNLASHKTVHTGE--KPYRCNICGAQFNRPANLKTH 64

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1 Length = 60

 Score = 52.1 bits (126), Expect = 5e-09
 Identities = 18/78 (23%), Positives = 34/78 (43%), Gaps = 28/78 (35%)

Query: 75  KLHECDLCGKNFSQRNNLKRQANGSNVNNRFSSNAELNKHSSAIHQRL----KLHECDLC 130
           +   C++C + F+++ +LKR                        H R     K + C LC
Sbjct: 1   RSFVCEVCTRAFARQEHLKR------------------------HYRSHTNEKPYPCGLC 36

Query: 131 GKNFSQRNNLKRHLEEVH 148
            + F++R+ L RH +++H
Sbjct: 37  NRAFTRRDLLIRHAQKIH 54

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1 Length = 60

 Score = 47.9 bits (115), Expect = 2e-07
 Identities = 22/74 (29%), Positives = 34/74 (45%), Gaps = 22/74 (29%)

Query: 665 CTLCDKTFTRKDSLKKHIRIFHTQNQPQHTNVIEVALGARANAAFIDRIRCELCDKSFTR 724
           C +C + F R++ LK+H R  HT  +P                       C LC+++FTR
Sbjct: 5   CEVCTRAFARQEHLKRHYRS-HTNEKPYP---------------------CGLCNRAFTR 42

Query: 725 KDSLKKHNRIFHGG 738
           +D L +H +  H G
Sbjct: 43  RDLLIRHAQKIHSG 56

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1 Length = 60

 Score = 47.5 bits (114), Expect = 2e-07
 Identities = 16/49 (32%), Positives = 25/49 (51%), Gaps = 1/49 (2%)

Query: 46 KRFKCEQCDKRFSSNAELNKHSSAIHQRLKLHECDLCGKNFSQRNNLKR 94
          + F CE C + F+    L +H    H   K + C LC + F++R+ L R
Sbjct: 1  RSFVCEVCTRAFARQEHLKRHYR-SHTNEKPYPCGLCNRAFTRRDLLIR 48

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1 Length = 60

 Score = 46.7 bits (112), Expect = 4e-07
 Identities = 18/52 (34%), Positives = 29/52 (55%), Gaps = 2/52 (3%)

Query: 20 CELCYKVFESRENLMRHLKIHDDKESKRFKCEQCDKRFSSNAELNKHSSAIH 71
          CE+C + F  +E+L RH + H   E K + C  C++ F+    L +H+  IH
Sbjct: 5  CEVCTRAFARQEHLKRHYRSHT-NE-KPYPCGLCNRAFTRRDLLIRHAQKIH 54

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1 Length = 60

 Score = 42.9 bits (102), Expect = 8e-06
 Identities = 21/52 (40%), Positives = 27/52 (51%), Gaps = 2/52 (3%)

Query: 155 FECYVCSKVLATSHSLKRHLLIHNGPK-YTCEICAKEFTRVYELNIH-KKLH 204
           F C VC++  A    LKRH   H   K Y C +C + FTR   L  H +K+H
Sbjct: 3   FVCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRHAQKIH 54

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1 Length = 60

 Score = 41.3 bits (98), Expect = 4e-05
 Identities = 21/82 (25%), Positives = 35/82 (42%), Gaps = 31/82 (37%)

Query: 448 QCHICLKTFAKKDSLKKHMKVFHTYISPDAIKEESGEGKPNILEVILQEGKVPNNNAIIQ 507
            C +C + FA+++ LK+H +  HT            E KP                    
Sbjct: 4   VCEVCTRAFARQEHLKRHYRS-HT-----------NE-KP------------------YP 32

Query: 508 CRICSKTFTRKDSLRKHMRRFH 529
           C +C++ FTR+D L +H ++ H
Sbjct: 33  CGLCNRAFTRRDLLIRHAQKIH 54

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1 Length = 60

 Score = 41.3 bits (98), Expect = 4e-05
 Identities = 15/55 (27%), Positives = 24/55 (43%), Gaps = 3/55 (5%)

Query: 182 YTCEICAKEFTRVYELNIHKKLHEDESVANQLKCEFCGKVFLKKSNLKAHIENNH 236
           + CE+C + F R   L  H + H +E       C  C + F ++  L  H +  H
Sbjct: 3   FVCEVCTRAFARQEHLKRHYRSHTNE---KPYPCGLCNRAFTRRDLLIRHAQKIH 54

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 52.4 bits (127), Expect = 5e-09
 Identities = 23/61 (37%), Positives = 37/61 (60%), Gaps = 3/61 (4%)

Query: 32 NLMRHLKIHDDKESKRFKCEQCDKRFSSNAELNKHSSAIHQRLKLHECDLCGKNFSQRNN 91
          +  R       +E +R+KC++C K FS +++L+KH    H   K ++CD CGK F QR++
Sbjct: 5  SSGRSEWQQ--RERRRYKCDECGKSFSHSSDLSKHRR-THTGEKPYKCDECGKAFIQRSH 61

Query: 92 L 92
          L
Sbjct: 62 L 62

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 48.2 bits (116), Expect = 2e-07
 Identities = 21/68 (30%), Positives = 34/68 (50%), Gaps = 4/68 (5%)

Query: 165 ATSHSLKRHLLIHNGPK-YTCEICAKEFTRVYELNIHKKLHEDESVANQLKCEFCGKVFL 223
            +S S  R        + Y C+ C K F+   +L+ H++ H  E      KC+ CGK F+
Sbjct: 1   GSSGSSGRSEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTGE---KPYKCDECGKAFI 57

Query: 224 KKSNLKAH 231
           ++S+L  H
Sbjct: 58  QRSHLIGH 65

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 46.7 bits (112), Expect = 7e-07
 Identities = 21/76 (27%), Positives = 32/76 (42%), Gaps = 12/76 (15%)

Query: 114 HSS--AIHQRL----KLHECDLCGKNFSQRNNLKRHLEEVHRT-DGMK-FECYVCSKVLA 165
            S      +      + ++CD CGK+FS  ++L +H     RT  G K ++C  C K   
Sbjct: 2   SSGSSGRSEWQQRERRRYKCDECGKSFSHSSDLSKH----RRTHTGEKPYKCDECGKAFI 57

Query: 166 TSHSLKRHLLIHNGPK 181
               L  H  +H G  
Sbjct: 58  QRSHLIGHHRVHTGSG 73

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 38.2 bits (90), Expect = 6e-04
 Identities = 15/47 (31%), Positives = 24/47 (51%), Gaps = 2/47 (4%)

Query: 20 CELCYKVFESRENLMRHLKIHDDKESKRFKCEQCDKRFSSNAELNKH 66
          C+ C K F    +L +H + H  +  K +KC++C K F   + L  H
Sbjct: 21 CDECGKSFSHSSDLSKHRRTHTGE--KPYKCDECGKAFIQRSHLIGH 65

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 115

 Score = 53.2 bits (127), Expect = 9e-09
 Identities = 20/117 (17%), Positives = 36/117 (30%), Gaps = 20/117 (17%)

Query: 29  SRENLMRHLKIHDDKESKRFKCEQCDKRFSSNAELNKH-SSAIHQRLKLHECDLCGKNFS 87
           S  +   +  I     + +F+C+ C   + +  EL  H +   H R   HE D       
Sbjct: 3   SGSSGKLYGSIF--TGASKFRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRW 60

Query: 88  QRNNLKRQANGSNVNNRFSSNAELNKHSSAIHQRLKLHECDLCGKNFSQRNNLKRHL 144
            +   +                             K+ +C  CG +F    +L  H+
Sbjct: 61  SKPRKRSLLEM-----------------EGKEDAQKVLKCMYCGHSFESLQDLSVHM 100

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 115

 Score = 52.8 bits (126), Expect = 1e-08
 Identities = 24/106 (22%), Positives = 36/106 (33%), Gaps = 6/106 (5%)

Query: 135 SQRNNLKRHLEEVHRTDGMKFECYVCSKVLATSHSLKRHLLIHNGPKYTCEICAKEFTRV 194
           S  ++ K +   +  T   KF C  CS    T   L  H+      +           + 
Sbjct: 2   SSGSSGKLY-GSIF-TGASKFRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKR 59

Query: 195 YELNIHKKLHE---DESVANQLKCEFCGKVFLKKSNLKAH-IENNH 236
           +     + L E    E     LKC +CG  F    +L  H I+  H
Sbjct: 60  WSKPRKRSLLEMEGKEDAQKVLKCMYCGHSFESLQDLSVHMIKTKH 105

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 115

 Score = 48.6 bits (115), Expect = 3e-07
 Identities = 21/113 (18%), Positives = 31/113 (27%), Gaps = 7/113 (6%)

Query: 106 SSNAELNKHSSAIHQRLKLHECDLCGKNFSQRNNLKRHLEEV-HRTDG--MKFECYVCSK 162
           SS +    + S I        C  C   +     L  H+ E  H  D             
Sbjct: 2   SSGSSGKLYGS-IFTGASKFRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRW 60

Query: 163 VLATSHSLKRHLLIHNGPK-YTCEICAKEFTRVYELNIH--KKLHEDESVANQ 212
                 SL       +  K   C  C   F  + +L++H  K  H  +     
Sbjct: 61  SKPRKRSLLEMEGKEDAQKVLKCMYCGHSFESLQDLSVHMIKTKHYQKVSGPS 113

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 115

 Score = 47.8 bits (113), Expect = 7e-07
 Identities = 19/102 (18%), Positives = 36/102 (35%), Gaps = 8/102 (7%)

Query: 226 SNLKAH--IENNHLDYSCLECKAVGEEISFDTKKNLLLHLK-TKHKNVISNVYLTCLICF 282
           S+ K +  I      + C +C A     ++DT   L +H+  T H    ++         
Sbjct: 5   SSGKLYGSIFTGASKFRCKDCSA-----AYDTLVELTVHMNETGHYRDDNHETDNNNPKR 59

Query: 283 KTFLTEVDLGKHMKMHMDDNQIQCRFCNKYFSRNYNLKQHMK 324
            +   +  L +          ++C +C   F    +L  HM 
Sbjct: 60  WSKPRKRSLLEMEGKEDAQKVLKCMYCGHSFESLQDLSVHMI 101

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 115

 Score = 45.9 bits (108), Expect = 4e-06
 Identities = 19/95 (20%), Positives = 33/95 (34%), Gaps = 3/95 (3%)

Query: 507 QCRICSKTFTRKDSLRKHMRRFHIINDTNVK--KEFTEGQINRNMLDVILKESGHEIKSR 564
           +C+ CS  +     L  HM       D N +      +         ++  E   + +  
Sbjct: 21  RCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWSKPRKRSLLEMEGKEDAQKV 80

Query: 565 IPCELCYKTFTRKDSLRKHM-KIFHTRRNPSANSG 598
           + C  C  +F     L  HM K  H ++    +SG
Sbjct: 81  LKCMYCGHSFESLQDLSVHMIKTKHYQKVSGPSSG 115

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 115

 Score = 44.4 bits (104), Expect = 1e-05
 Identities = 16/102 (15%), Positives = 30/102 (29%), Gaps = 6/102 (5%)

Query: 428 SNTNNHGSGSTNNTQANKIIQCHICLKTFAKKDSLKKHMKVFH--TYISPDAIKEESGEG 485
           S+   +GS  T         +C  C   +     L  HM         + +         
Sbjct: 5   SSGKLYGSIFT----GASKFRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRW 60

Query: 486 KPNILEVILQEGKVPNNNAIIQCRICSKTFTRKDSLRKHMRR 527
                  +L+     +   +++C  C  +F     L  HM +
Sbjct: 61  SKPRKRSLLEMEGKEDAQKVLKCMYCGHSFESLQDLSVHMIK 102

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 115

 Score = 42.4 bits (99), Expect = 5e-05
 Identities = 11/77 (14%), Positives = 24/77 (31%), Gaps = 2/77 (2%)

Query: 20 CELCYKVFESRENLMRHLKIHDDKESKRFKCEQCDKRFSSNAELNKHSS--AIHQRLKLH 77
          C+ C   +++   L  H+           + +  + +  S                 K+ 
Sbjct: 22 CKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWSKPRKRSLLEMEGKEDAQKVL 81

Query: 78 ECDLCGKNFSQRNNLKR 94
          +C  CG +F    +L  
Sbjct: 82 KCMYCGHSFESLQDLSV 98

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 115

 Score = 41.7 bits (97), Expect = 9e-05
 Identities = 21/92 (22%), Positives = 31/92 (33%), Gaps = 4/92 (4%)

Query: 712 RIRCELCDKSFTRKDSLKKH-NRIFHGGADPKVMDEQMARGSADFLEVVLNEDGEGEPVS 770
           + RC+ C  ++     L  H N   H   D    D    +  +   +  L E    E   
Sbjct: 19  KFRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWSKPRKRSLLEMEGKEDAQ 78

Query: 771 ITNEILCKICNRTFTRNYNLKKHM-KTVHKID 801
               + C  C  +F    +L  HM KT H   
Sbjct: 79  --KVLKCMYCGHSFESLQDLSVHMIKTKHYQK 108

>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1} Length = 129

 Score = 53.8 bits (128), Expect = 9e-09
 Identities = 20/110 (18%), Positives = 35/110 (31%), Gaps = 7/110 (6%)

Query: 127 CDLCGKNFSQRNNLKRHLEEVHRTDGMKFECYVCSKVLATSHSLKRHLLIHNGPKYTCEI 186
             +  +   + + L    + + R            ++L  S  L R L      ++ C +
Sbjct: 22  IHVTLEELKRYHQLTPEQKRLIRAIVKTLIH--NPQLLDESSYLYRLLASKAISQFVCPL 79

Query: 187 CAKEFTRVYELNIHKKLHEDESVANQLKCEFCGKVFLKKSNLKAHIENNH 236
           C   F+    L  H +  E   V     C  C K F    +   H+   H
Sbjct: 80  CLMPFSSSVSLKQHIRYTEHTKV-----CPVCKKEFTSTDSALDHVCKKH 124

>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1} Length = 129

 Score = 41.5 bits (96), Expect = 2e-04
 Identities = 14/64 (21%), Positives = 25/64 (39%), Gaps = 4/64 (6%)

Query: 8   HIKSHEYVENHMCELCYKVFESRENLMRHLKIHDDKESKRFKCEQCDKRFSSNAELNKHS 67
            + + + +   +C LC   F S  +L +H++  +        C  C K F+S      H 
Sbjct: 65  RLLASKAISQFVCPLCLMPFSSSVSLKQHIRYTE----HTKVCPVCKKEFTSTDSALDHV 120

Query: 68  SAIH 71
              H
Sbjct: 121 CKKH 124

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 70

 Score = 50.2 bits (121), Expect = 3e-08
 Identities = 15/49 (30%), Positives = 22/49 (44%), Gaps = 1/49 (2%)

Query: 46 KRFKCEQCDKRFSSNAELNKHSSAIHQRLKLHECDLCGKNFSQRNNLKR 94
             KC +C    SS A L  H   IH   +  +C+ C  +  Q +NL +
Sbjct: 8  HPEKCSECSYSCSSKAALRIH-ERIHCTDRPFKCNYCSFDTKQPSNLSK 55

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 70

 Score = 49.0 bits (118), Expect = 8e-08
 Identities = 17/73 (23%), Positives = 28/73 (38%), Gaps = 22/73 (30%)

Query: 665 CTLCDKTFTRKDSLKKHIRIFHTQNQPQHTNVIEVALGARANAAFIDRIRCELCDKSFTR 724
           C+ C  + + K +L+ H RI H  ++P                      +C  C     +
Sbjct: 12  CSECSYSCSSKAALRIHERI-HCTDRP---------------------FKCNYCSFDTKQ 49

Query: 725 KDSLKKHNRIFHG 737
             +L KH + FHG
Sbjct: 50  PSNLSKHMKKFHG 62

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 70

 Score = 45.6 bits (109), Expect = 1e-06
 Identities = 14/54 (25%), Positives = 19/54 (35%), Gaps = 3/54 (5%)

Query: 18 HMCELCYKVFESRENLMRHLKIHDDKESKRFKCEQCDKRFSSNAELNKHSSAIH 71
            C  C     S+  L  H +IH     + FKC  C       + L+KH     
Sbjct: 10 EKCSECSYSCSSKAALRIHERIHCTD--RPFKCNYCSFDTKQPSNLSKH-MKKF 60

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 70

 Score = 44.8 bits (107), Expect = 2e-06
 Identities = 13/61 (21%), Positives = 23/61 (37%), Gaps = 6/61 (9%)

Query: 123 KLHECDLCGKNFSQRNNLKRHLEEVHRT-DGMK-FECYVCSKVLATSHSLKRHLLIHNGP 180
              +C  C  + S +  L+ H     R     + F+C  CS       +L +H+   +G 
Sbjct: 8   HPEKCSECSYSCSSKAALRIH----ERIHCTDRPFKCNYCSFDTKQPSNLSKHMKKFHGD 63

Query: 181 K 181
            
Sbjct: 64  M 64

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 70

 Score = 44.0 bits (105), Expect = 4e-06
 Identities = 12/74 (16%), Positives = 25/74 (33%), Gaps = 28/74 (37%)

Query: 75  KLHECDLCGKNFSQRNNLKRQANGSNVNNRFSSNAELNKHSSAIHQRL----KLHECDLC 130
              +C  C  + S +  L+                         H+R+    +  +C+ C
Sbjct: 8   HPEKCSECSYSCSSKAALRI------------------------HERIHCTDRPFKCNYC 43

Query: 131 GKNFSQRNNLKRHL 144
             +  Q +NL +H+
Sbjct: 44  SFDTKQPSNLSKHM 57

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 70

 Score = 42.5 bits (101), Expect = 2e-05
 Identities = 12/51 (23%), Positives = 23/51 (45%), Gaps = 1/51 (1%)

Query: 155 FECYVCSKVLATSHSLKRHLLIHNGPK-YTCEICAKEFTRVYELNIHKKLH 204
            +C  CS   ++  +L+ H  IH   + + C  C+ +  +   L+ H K  
Sbjct: 10  EKCSECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKHMKKF 60

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 70

 Score = 41.7 bits (99), Expect = 3e-05
 Identities = 13/56 (23%), Positives = 22/56 (39%), Gaps = 4/56 (7%)

Query: 177 HNGPK-YTCEICAKEFTRVYELNIHKKLHEDESVANQLKCEFCGKVFLKKSNLKAH 231
            +      C  C+   +    L IH+++H  +      KC +C     + SNL  H
Sbjct: 4   GSSGHPEKCSECSYSCSSKAALRIHERIHCTD---RPFKCNYCSFDTKQPSNLSKH 56

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 72

 Score = 49.8 bits (120), Expect = 4e-08
 Identities = 20/60 (33%), Positives = 30/60 (50%), Gaps = 3/60 (5%)

Query: 33 LMRHLKIHDDKESKRFKCEQCDKRFSSNAELNKHSSAIHQRLKLHECDLCGKNFSQRNNL 92
                IH  +  K + C +C K FS ++ L +H   +H   K ++C  CGK FSQ + L
Sbjct: 2  SSGSSGIHSGE--KPYGCVECGKAFSRSSILVQHQR-VHTGEKPYKCLECGKAFSQNSGL 58

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 72

 Score = 47.5 bits (114), Expect = 3e-07
 Identities = 21/81 (25%), Positives = 29/81 (35%), Gaps = 32/81 (39%)

Query: 71  HQRL----KLHECDLCGKNFSQRNNLKRQANGSNVNNRFSSNAELNKHSSAIHQRL---- 122
              +    K + C  CGK FS+ + L                          HQR+    
Sbjct: 5   SSGIHSGEKPYGCVECGKAFSRSSIL------------------------VQHQRVHTGE 40

Query: 123 KLHECDLCGKNFSQRNNLKRH 143
           K ++C  CGK FSQ + L  H
Sbjct: 41  KPYKCLECGKAFSQNSGLINH 61

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 72

 Score = 46.7 bits (112), Expect = 6e-07
 Identities = 23/63 (36%), Positives = 29/63 (46%), Gaps = 4/63 (6%)

Query: 170 LKRHLLIHNGPK-YTCEICAKEFTRVYELNIHKKLHEDESVANQLKCEFCGKVFLKKSNL 228
                 IH+G K Y C  C K F+R   L  H+++H  E      KC  CGK F + S L
Sbjct: 2   SSGSSGIHSGEKPYGCVECGKAFSRSSILVQHQRVHTGE---KPYKCLECGKAFSQNSGL 58

Query: 229 KAH 231
             H
Sbjct: 59  INH 61

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 72

 Score = 45.5 bits (109), Expect = 2e-06
 Identities = 19/69 (27%), Positives = 28/69 (40%), Gaps = 10/69 (14%)

Query: 119 HQRL----KLHECDLCGKNFSQRNNLKRHLEEVHRT-DGMK-FECYVCSKVLATSHSLKR 172
              +    K + C  CGK FS+ + L +H     R   G K ++C  C K  + +  L  
Sbjct: 5   SSGIHSGEKPYGCVECGKAFSRSSILVQH----QRVHTGEKPYKCLECGKAFSQNSGLIN 60

Query: 173 HLLIHNGPK 181
           H  IH    
Sbjct: 61  HQRIHTSGP 69

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 72

 Score = 40.9 bits (97), Expect = 6e-05
 Identities = 17/47 (36%), Positives = 25/47 (53%), Gaps = 2/47 (4%)

Query: 20 CELCYKVFESRENLMRHLKIHDDKESKRFKCEQCDKRFSSNAELNKH 66
          C  C K F     L++H ++H  +  K +KC +C K FS N+ L  H
Sbjct: 17 CVECGKAFSRSSILVQHQRVHTGE--KPYKCLECGKAFSQNSGLINH 61

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 72

 Score = 39.4 bits (93), Expect = 2e-04
 Identities = 20/77 (25%), Positives = 28/77 (36%), Gaps = 23/77 (29%)

Query: 665 CTLCDKTFTRKDSLKKHIRIFHTQNQPQHTNVIEVALGARANAAFIDRIRCELCDKSFTR 724
           C  C K F+R   L +H R+ HT  +P                      +C  C K+F++
Sbjct: 17  CVECGKAFSRSSILVQHQRV-HTGEKP---------------------YKCLECGKAFSQ 54

Query: 725 KDSLKKHNRIFHGGADP 741
              L  H RI H     
Sbjct: 55  NSGLINHQRI-HTSGPS 70

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 Length = 73

 Score = 48.8 bits (117), Expect = 9e-08
 Identities = 20/61 (32%), Positives = 34/61 (55%), Gaps = 3/61 (4%)

Query: 36 HLKIHDDKESKRFKC--EQCDKRFSSNAELNKHSSAIHQRLKLHECDLCGKNFSQRNNLK 93
          +L  +   + + + C  E CD+RFS + EL +H   IH   K  +C +C +NFS+ ++L 
Sbjct: 8  NLLNYVVPKMRPYACPVESCDRRFSRSDELTRHIR-IHTGQKPFQCRICMRNFSRSDHLT 66

Query: 94 R 94
           
Sbjct: 67 T 67

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 Length = 73

 Score = 48.5 bits (116), Expect = 1e-07
 Identities = 22/74 (29%), Positives = 32/74 (43%), Gaps = 7/74 (9%)

Query: 134 FSQRNNLKRHLEEVHRTDGMKFECYV--CSKVLATSHSLKRHLLIHNGPK-YTCEICAKE 190
               NNL  ++          + C V  C +  + S  L RH+ IH G K + C IC + 
Sbjct: 3   PHPMNNLLNYV----VPKMRPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRN 58

Query: 191 FTRVYELNIHKKLH 204
           F+R   L  H + H
Sbjct: 59  FSRSDHLTTHIRTH 72

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 Length = 73

 Score = 48.1 bits (115), Expect = 2e-07
 Identities = 21/67 (31%), Positives = 30/67 (44%), Gaps = 22/67 (32%)

Query: 668 CDKTFTRKDSLKKHIRIFHTQNQPQHTNVIEVALGARANAAFIDRIRCELCDKSFTRKDS 727
           CD+ F+R D L +HIRI        HT       G +         +C +C ++F+R D 
Sbjct: 27  CDRRFSRSDELTRHIRI--------HT-------GQK-------PFQCRICMRNFSRSDH 64

Query: 728 LKKHNRI 734
           L  H R 
Sbjct: 65  LTTHIRT 71

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 Length = 73

 Score = 41.5 bits (98), Expect = 4e-05
 Identities = 19/79 (24%), Positives = 28/79 (35%), Gaps = 32/79 (40%)

Query: 511 CSKTFTRKDSLRKHMRRFHIINDTNVKKEFTEGQINRNMLDVILKESGHEIKSRIPCELC 570
           C + F+R D L +H+R  H    T  K                             C +C
Sbjct: 27  CDRRFSRSDELTRHIRI-H----TGQK--------------------------PFQCRIC 55

Query: 571 YKTFTRKDSLRKHMKIFHT 589
            + F+R D L  H++  HT
Sbjct: 56  MRNFSRSDHLTTHIRT-HT 73

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 Length = 73

 Score = 41.1 bits (97), Expect = 5e-05
 Identities = 18/68 (26%), Positives = 32/68 (47%), Gaps = 6/68 (8%)

Query: 167 SHSLKRHLLIHNGPKYTC--EICAKEFTRVYELNIHKKLHEDESVANQLKCEFCGKVFLK 224
            ++L  +++    P Y C  E C + F+R  EL  H ++H  +      +C  C + F +
Sbjct: 6   MNNLLNYVVPKMRP-YACPVESCDRRFSRSDELTRHIRIHTGQ---KPFQCRICMRNFSR 61

Query: 225 KSNLKAHI 232
             +L  HI
Sbjct: 62  SDHLTTHI 69

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 Length = 73

 Score = 41.1 bits (97), Expect = 6e-05
 Identities = 21/76 (27%), Positives = 32/76 (42%), Gaps = 31/76 (40%)

Query: 452 CLKTFAKKDSLKKHMKVFHTYISPDAIKEESGEGKPNILEVILQEGKVPNNNAIIQCRIC 511
           C + F++ D L +H+++ HT           G+ KP                   QCRIC
Sbjct: 27  CDRRFSRSDELTRHIRI-HT-----------GQ-KP------------------FQCRIC 55

Query: 512 SKTFTRKDSLRKHMRR 527
            + F+R D L  H+R 
Sbjct: 56  MRNFSRSDHLTTHIRT 71

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 Length = 73

 Score = 40.8 bits (96), Expect = 7e-05
 Identities = 22/81 (27%), Positives = 31/81 (38%), Gaps = 34/81 (41%)

Query: 716 ELCDKSFTRKDSLKKHNRIFHGGADPKVMDEQMARGSADFLEVVLNEDGEGEPVSITNEI 775
           E CD+ F+R D L +H RI H G  P                                  
Sbjct: 25  ESCDRRFSRSDELTRHIRI-HTGQKP---------------------------------F 50

Query: 776 LCKICNRTFTRNYNLKKHMKT 796
            C+IC R F+R+ +L  H++T
Sbjct: 51  QCRICMRNFSRSDHLTTHIRT 71

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 Length = 73

 Score = 40.8 bits (96), Expect = 8e-05
 Identities = 16/47 (34%), Positives = 27/47 (57%)

Query: 281 CFKTFLTEVDLGKHMKMHMDDNQIQCRFCNKYFSRNYNLKQHMKTCT 327
           C + F    +L +H+++H      QCR C + FSR+ +L  H++T T
Sbjct: 27  CDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHT 73

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 Length = 73

 Score = 40.4 bits (95), Expect = 1e-04
 Identities = 16/46 (34%), Positives = 24/46 (52%), Gaps = 2/46 (4%)

Query: 21 ELCYKVFESRENLMRHLKIHDDKESKRFKCEQCDKRFSSNAELNKH 66
          E C + F   + L RH++IH  +  K F+C  C + FS +  L  H
Sbjct: 25 ESCDRRFSRSDELTRHIRIHTGQ--KPFQCRICMRNFSRSDHLTTH 68

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 Length = 73

 Score = 38.8 bits (91), Expect = 3e-04
 Identities = 17/71 (23%), Positives = 30/71 (42%), Gaps = 12/71 (16%)

Query: 115 SSAIHQRLKLHE----CDL--CGKNFSQRNNLKRHLEEVHRT-DGMK-FECYVCSKVLAT 166
            + +   +        C +  C + FS+ + L RH+    R   G K F+C +C +  + 
Sbjct: 6   MNNLLNYVVPKMRPYACPVESCDRRFSRSDELTRHI----RIHTGQKPFQCRICMRNFSR 61

Query: 167 SHSLKRHLLIH 177
           S  L  H+  H
Sbjct: 62  SDHLTTHIRTH 72

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 Length = 54

 Score = 48.0 bits (115), Expect = 1e-07
 Identities = 13/43 (30%), Positives = 19/43 (44%)

Query: 46 KRFKCEQCDKRFSSNAELNKHSSAIHQRLKLHECDLCGKNFSQ 88
          K + C+ C K FS    LN H   +H   + H+C +     S 
Sbjct: 11 KPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGPSS 53

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 Length = 54

 Score = 41.4 bits (98), Expect = 2e-05
 Identities = 14/49 (28%), Positives = 24/49 (48%), Gaps = 3/49 (6%)

Query: 115 SSAIHQRLKLHECDLCGKNFSQRNNLKRHLEEVHRTDGMK-FECYVCSK 162
           S +     K + C  CGK FS+ ++L  H+++VH     +  +C V   
Sbjct: 3   SGSSGSVGKPYICQSCGKGFSRPDHLNGHIKQVH--TSERPHKCQVWVS 49

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 Length = 54

 Score = 40.3 bits (95), Expect = 7e-05
 Identities = 14/70 (20%), Positives = 23/70 (32%), Gaps = 19/70 (27%)

Query: 67  SSAIHQRLKLHECDLCGKNFSQRNNLKRQANGSNVNNRFSSNAELNKHSSAIHQRLKLHE 126
           S +     K + C  CGK FS+ ++L                     H   +H   + H+
Sbjct: 3   SGSSGSVGKPYICQSCGKGFSRPDHLNG-------------------HIKQVHTSERPHK 43

Query: 127 CDLCGKNFSQ 136
           C +     S 
Sbjct: 44  CQVWVSGPSS 53

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 95

 Score = 49.2 bits (117), Expect = 2e-07
 Identities = 16/76 (21%), Positives = 25/76 (32%), Gaps = 10/76 (13%)

Query: 118 IHQRLKLHECDLCGKNFSQRNNLKRHLEEVHRTDGMKFECYVCS--------KVLATSHS 169
           I +         C + FS  + L  H+   H   G +   +VC         K     + 
Sbjct: 19  IDEAQLSRPKKSCDRTFSTMHELVTHVTMEH-VGGPEQNNHVCYWEECPREGKSFKAKYK 77

Query: 170 LKRHLLIHNGPK-YTC 184
           L  H+ +H G K    
Sbjct: 78  LVNHIRVHTGEKSGPS 93

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 95

 Score = 43.0 bits (101), Expect = 2e-05
 Identities = 18/71 (25%), Positives = 25/71 (35%), Gaps = 13/71 (18%)

Query: 664 PCTLCDKTFTRKDSLKKHIRIFHTQNQPQHTNVIEVALGARANAAFIDRIRCELCDKSFT 723
           P   CD+TF+    L  H+ + H     Q+ +V                  C    KSF 
Sbjct: 27  PKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCY-------------WEECPREGKSFK 73

Query: 724 RKDSLKKHNRI 734
            K  L  H R+
Sbjct: 74  AKYKLVNHIRV 84

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 95

 Score = 41.9 bits (98), Expect = 6e-05
 Identities = 15/61 (24%), Positives = 22/61 (36%), Gaps = 8/61 (13%)

Query: 42 DKESKRFKCEQCDKRFSSNAELNKHSSAIHQRLKLH--------ECDLCGKNFSQRNNLK 93
          D+       + CD+ FS+  EL  H +  H              EC   GK+F  +  L 
Sbjct: 20 DEAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLV 79

Query: 94 R 94
           
Sbjct: 80 N 80

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 52.2 bits (124), Expect = 6e-07
 Identities = 93/607 (15%), Positives = 176/607 (28%), Gaps = 160/607 (26%)

Query: 294 HMKMHMDDNQIQCRFCNK--------YFSRNYNLKQHMKTCTKNV-SNG----ILNCDDN 340
           H   HMD    + ++  K         F  N++ K  ++   K++ S      I+   D 
Sbjct: 2   HHHHHMDFETGEHQYQYKDILSVFEDAFVDNFDCK-DVQDMPKSILSKEEIDHIIMSKDA 60

Query: 341 EG----------EYNGHGSHE--ENEDDEDYDDMNEMMLVPVIKMELKEENEENEDRENQ 388
                               +  E     +Y       L+  IK E ++ +        Q
Sbjct: 61  VSGTLRLFWTLLSKQEEMVQKFVEEVLRINYK-----FLMSPIKTEQRQPSMMTRMYIEQ 115

Query: 389 SEE--ENYTPVPEVSIKRETDPLSVEDIISAGEVSITPIPQSNTNNH---GSGST---NN 440
            +    +     + ++ R    L +   +   E+     P  N       GSG T    +
Sbjct: 116 RDRLYNDNQVFAKYNVSRLQPYLKLRQALL--ELR----PAKNVLIDGVLGSGKTWVALD 169

Query: 441 TQANKIIQCHICLKTF-------AKKDSLKKHMKVFHTYISPD---------AIKEESGE 484
              +  +QC +  K F          +++ + ++     I P+          IK     
Sbjct: 170 VCLSYKVQCKMDFKIFWLNLKNCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHS 229

Query: 485 GK------------PNILEVILQEGKVPNNNAI----IQCRICSKTFTRK----DSLRKH 524
            +             N L ++L    V N  A     + C+I   T TR     D L   
Sbjct: 230 IQAELRRLLKSKPYENCL-LVLLN--VQNAKAWNAFNLSCKILL-T-TRFKQVTDFL-SA 283

Query: 525 MRRFHIINDTNVKKEFTEGQINRNMLDVILKESGHEIKSRIPCELCYKTFTRKDSL-RKH 583
               HI  D +     T  +    +  ++LK      +  +P E+   T  R+ S+  + 
Sbjct: 284 ATTTHISLD-HHSMTLTPDE----VKSLLLKYLDCRPQD-LPREVL-TTNPRRLSIIAES 336

Query: 584 MKIFHTRRNPSANSGNSGTSAPPAVKLEQNGGEKVEN--STSVENSTSVE-----NSTSV 636
           ++      +                  +    +K+     +S+      E     +  SV
Sbjct: 337 IRDGLATWDN----------------WKHVNCDKLTTIIESSLNVLEPAEYRKMFDRLSV 380

Query: 637 -ENSANVENTSSV-----DNRTSVGPVAPIDRIPCTLCDKTFTRKDSLKKHIRIFHTQNQ 690
              SA++   + +      +            +   L   +   K   +  I I     +
Sbjct: 381 FPPSAHI--PTILLSLIWFDVIKSDV----MVVVNKLHKYSLVEKQPKESTISIPSIYLE 434

Query: 691 PQHTNVIEVALGARANAAFIDR--IRCELCDKSFTRKDSLKK--HNRI-FH-GGADPKVM 744
            +     E AL    + + +D   I              L +  ++ I  H    +    
Sbjct: 435 LKVKLENEYAL----HRSIVDHYNIPKTFDSDDLI-PPYLDQYFYSHIGHHLKNIEHPER 489

Query: 745 DEQMARGSAD--FLEVVLNEDG--EGEPVSITNEILCKICNRTFTRNYNLKKHMKTVHKI 800
                    D  FLE  +  D        SI N +          + Y  K +      I
Sbjct: 490 MTLFRMVFLDFRFLEQKIRHDSTAWNASGSILNTLQ------QL-KFY--KPY------I 534

Query: 801 DDNEPYF 807
            DN+P +
Sbjct: 535 CDNDPKY 541

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 49.9 bits (118), Expect = 4e-06
 Identities = 75/508 (14%), Positives = 156/508 (30%), Gaps = 147/508 (28%)

Query: 107 SNAELN---KHSSAIHQRLKLHECDLCGKNFSQRNNLKRHLEEVHRTD------GMKFEC 157
           S  E++       A+   L+L    L  K   Q   +++ +EEV R +       +K E 
Sbjct: 47  SKEEIDHIIMSKDAVSGTLRLFWT-LLSK---QEEMVQKFVEEVLRINYKFLMSPIKTEQ 102

Query: 158 YVCSKVLATSHSLKRHLLIHNGPKYTCEICAKEF-TRVYE-LNIHKKLHEDESVAN---- 211
                 + T   +++   ++N      ++ AK   +R+   L + + L E     N    
Sbjct: 103 R--QPSMMTRMYIEQRDRLYNDN----QVFAKYNVSRLQPYLKLRQALLELRPAKNVLID 156

Query: 212 ------------------QLKCEFCGKVF-------------LKK-SNLKAHIENNHLDY 239
                             +++C+   K+F             L+    L   I+ N   +
Sbjct: 157 GVLGSGKTWVALDVCLSYKVQCKMDFKIFWLNLKNCNSPETVLEMLQKLLYQIDPN---W 213

Query: 240 SCLECKAVGEEISFDTKKNLLLHLKTKHKNVISNVYLTCLICFKTFLTEVDLGKHMKMHM 299
           +     +   ++   + +  L  L      + S  Y  CL+     L  V   K      
Sbjct: 214 TSRSDHSSNIKLRIHSIQAELRRL------LKSKPYENCLL----VLLNVQNAKAWN-AF 262

Query: 300 DDNQIQCRFCNKYFSRNYNLKQHMKTCTKNVSNGILNCDDNEGEYNGHGSHEENEDDEDY 359
           +   + C+           L   + T  K V++ +            H S + +      
Sbjct: 263 N---LSCKI----------L---LTTRFKQVTDFL------SAATTTHISLDHHSMTLTP 300

Query: 360 DDMNEMMLVPVIKMELKEENEENEDRENQSEEENYTPVPEVSIKRETDPLSVEDIISAGE 419
           D++   +L+  +    ++                   +P   +   T+P  +  II+   
Sbjct: 301 DEVKS-LLLKYLDCRPQD-------------------LPREVLT--TNPRRL-SIIAE-S 336

Query: 420 VSITPIPQSNTNNHGSGSTNNTQANKIIQCHICLKTFAKKDSLKKHMK---VF--HTYIS 474
           +        N  +      N  +   II+    L    +    +K      VF    +I 
Sbjct: 337 IRDGLATWDNWKH-----VNCDKLTTIIE--SSLNVL-EPAEYRKMFDRLSVFPPSAHIP 388

Query: 475 PDAIKEESGEGKPNILEVILQE-------GKVPNNNAI----IQCRICSKTFTRKDSLRK 523
              +     +   + + V++ +        K P  + I    I   +  K    ++    
Sbjct: 389 TILLSLIWFDVIKSDVMVVVNKLHKYSLVEKQPKESTISIPSIYLELKVK---LENEYAL 445

Query: 524 HMRRFHIINDTNVKKEFTEGQINRNMLD 551
           H     I++  N+ K F    +    LD
Sbjct: 446 HRS---IVDHYNIPKTFDSDDLIPPYLD 470

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 45.6 bits (107), Expect = 8e-05
 Identities = 54/416 (12%), Positives = 119/416 (28%), Gaps = 107/416 (25%)

Query: 1   MQMIISEHIKSHEYVENHMCELCYKVFESRENLMRHLK---------IHDDKESKR---- 47
           +Q ++ +   +     +H   +  ++   +  L R LK         +  + ++ +    
Sbjct: 202 LQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYENCLLVLLNVQNAKAWNA 261

Query: 48  --FKCEQCDK-----RFSS-----NAELNKHSSAIHQRLKLHEC---DLCGKNFSQR-NN 91
               C    K     RF       +A    H S  H  + L       L  K    R  +
Sbjct: 262 FNLSC----KILLTTRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQD 317

Query: 92  LKRQA----------------NGSNVNNRFSSNAELNKHSSAIHQRLKLHECDLCGKNFS 135
           L R+                 +G    + +  +   +K ++ I   L + E     K F 
Sbjct: 318 LPREVLTTNPRRLSIIAESIRDGLATWDNW-KHVNCDKLTTIIESSLNVLEPAEYRKMFD 376

Query: 136 Q----RNN-------LKRHLEEVHRTDGMKFECYVCSKVLATSHSLKRHLLIHNGPKYTC 184
           +      +       L     +V ++D M     +    L      +  + I +      
Sbjct: 377 RLSVFPPSAHIPTILLSLIWFDVIKSDVMVVVNKLHKYSLVEKQPKESTISIPS---IYL 433

Query: 185 EICAKEFTRVYELNIHKKLHEDESVANQLKCEFCGKVFLKKSNLKAHIEN---NHLDYSC 241
           E+  K      E  +H+ + +       +   F     +       +++    +H+ +  
Sbjct: 434 ELKVK---LENEYALHRSIVD----HYNIPKTFDSDDLIPP-----YLDQYFYSHIGHHL 481

Query: 242 LECKAVGEEISFDTKKNLLLHL-----KTKHKNVISNVYLTCLICFKTFLTEVDLGKHMK 296
              +       F   + + L       K +H +   N   + L    T      L  + K
Sbjct: 482 KNIEHPERMTLF---RMVFLDFRFLEQKIRHDSTAWNASGSIL---NTLQ---QLKFY-K 531

Query: 297 MHMDDNQIQCRFCNKYFSRNYNLKQHMKTCTKNVSNGILNC-------DDNEGEYN 345
            ++ DN        KY      +   +    +N+               ++E  + 
Sbjct: 532 PYICDN------DPKYERLVNAILDFLPKIEENLICSKYTDLLRIALMAEDEAIFE 581

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 107

 Score = 44.9 bits (105), Expect = 5e-06
 Identities = 19/88 (21%), Positives = 27/88 (30%), Gaps = 6/88 (6%)

Query: 7  EHIKSHEYVENHMCELCYKVFESRENLMRHLKIHDDKESKRFKCEQCDKRFSSNAELNKH 66
                E  E + C LC     S      H ++  +       C  C  RF S     +H
Sbjct: 6  SGASPVENKEVYQCRLCNAKLSSLLEQGSHERLCRN----AAVCPYCSLRFFSPELKQEH 61

Query: 67 SSAIHQRLKLHECDLCGKNFSQRNNLKR 94
           S      K   C  C + F    ++ R
Sbjct: 62 ES--KCEYKKLTCLECMRTFKSSFSIWR 87

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 107

 Score = 44.5 bits (104), Expect = 8e-06
 Identities = 17/89 (19%), Positives = 30/89 (33%), Gaps = 5/89 (5%)

Query: 123 KLHECDLCGKNFSQRNNLKRHLEEVHRTDGMKFECYVCSKVLATSHSLKRHLLIHNGPKY 182
           ++++C LC    S       H             C  CS    +    + H       K 
Sbjct: 15  EVYQCRLCNAKLSSLLEQGSHERLCRN----AAVCPYCSLRFFSPELKQEHESKCEYKKL 70

Query: 183 TCEICAKEFTRVYELNIH-KKLHEDESVA 210
           TC  C + F   + +  H  ++H   ++A
Sbjct: 71  TCLECMRTFKSSFSIWRHQVEVHNQNNMA 99

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 107

 Score = 44.5 bits (104), Expect = 9e-06
 Identities = 23/111 (20%), Positives = 34/111 (30%), Gaps = 24/111 (21%)

Query: 43  KESKRFKCEQCDKRFSSNAELNKHSSAIHQRLKLHECDLCGKNFSQRNNLKRQANGSNVN 102
           +  + ++C  C+ + SS  E   H            C  C                    
Sbjct: 12  ENKEVYQCRLCNAKLSSLLEQGSHERLCRNAAV---CPYCSL------------------ 50

Query: 103 NRFSSNAELNKHSSAIHQRLKLHECDLCGKNFSQRNNLKRHLEEVHRTDGM 153
            RF S     +H S      K   C  C + F    ++ RH  EVH  + M
Sbjct: 51  -RFFSPELKQEHES--KCEYKKLTCLECMRTFKSSFSIWRHQVEVHNQNNM 98

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 107

 Score = 44.1 bits (103), Expect = 1e-05
 Identities = 20/94 (21%), Positives = 37/94 (39%), Gaps = 13/94 (13%)

Query: 176 IHNGPKYTCEICAKEFTRVYELNIHKKLHEDESVANQLKCEFCGKVFLKKSNLKAHIENN 235
           + N   Y C +C  + + + E   H++L  + +V     C +C   F      + H E+ 
Sbjct: 11  VENKEVYQCRLCNAKLSSLLEQGSHERLCRNAAV-----CPYCSLRFFSPELKQEH-ESK 64

Query: 236 HLD--YSCLECKAVGEEISFDTKKNLLLHLKTKH 267
                 +CLEC       +F +  ++  H    H
Sbjct: 65  CEYKKLTCLECMR-----TFKSSFSIWRHQVEVH 93

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens} Length = 72

 Score = 41.6 bits (98), Expect = 3e-05
 Identities = 17/48 (35%), Positives = 24/48 (50%), Gaps = 3/48 (6%)

Query: 160 CSKVLATSHSLKRHLLIHNGPK-YTC--EICAKEFTRVYELNIHKKLH 204
           C K    S  LK H   H G K ++C  + C + F R  EL+ H++ H
Sbjct: 25  CGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFARSDELSRHRRTH 72

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens} Length = 72

 Score = 40.4 bits (95), Expect = 9e-05
 Identities = 16/63 (25%), Positives = 30/63 (47%), Gaps = 6/63 (9%)

Query: 8  HIKSHEYVENHMC--ELCYKVFESRENLMRHLKIHDDKESKRFKC--EQCDKRFSSNAEL 63
                 + +H+C    C K +    +L  H + H  +  K F C  + C++RF+ + EL
Sbjct: 8  PQIDSSRIRSHICSHPGCGKTYFKSSHLKAHTRTHTGE--KPFSCSWKGCERRFARSDEL 65

Query: 64 NKH 66
          ++H
Sbjct: 66 SRH 68

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens} Length = 72

 Score = 40.1 bits (94), Expect = 1e-04
 Identities = 22/71 (30%), Positives = 29/71 (40%), Gaps = 10/71 (14%)

Query: 113 KHSSAIHQRLKLHECDL--CGKNFSQRNNLKRHLEEVHRTD-GMK-FECYV--CSKVLAT 166
                   R++ H C    CGK + + ++LK H     RT  G K F C    C +  A 
Sbjct: 6   SGPQIDSSRIRSHICSHPGCGKTYFKSSHLKAHT----RTHTGEKPFSCSWKGCERRFAR 61

Query: 167 SHSLKRHLLIH 177
           S  L RH   H
Sbjct: 62  SDELSRHRRTH 72

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens} Length = 72

 Score = 38.9 bits (91), Expect = 4e-04
 Identities = 17/67 (25%), Positives = 25/67 (37%), Gaps = 20/67 (29%)

Query: 668 CDKTFTRKDSLKKHIRIFHTQNQPQHTNVIEVALGARANAAFIDRIRCELCDKSFTRKDS 727
           C KT+ +   LK H R  HT  +P   +                    + C++ F R D 
Sbjct: 25  CGKTYFKSSHLKAHTRT-HTGEKPFSCSW-------------------KGCERRFARSDE 64

Query: 728 LKKHNRI 734
           L +H R 
Sbjct: 65  LSRHRRT 71

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A Length = 57

 Score = 40.9 bits (95), Expect = 5e-05
 Identities = 13/49 (26%), Positives = 23/49 (46%), Gaps = 1/49 (2%)

Query: 47 RFKCEQCDKRFSSNAELNKHSSAIHQRLKLHECDLCGKNFSQRNNLKRQ 95
          ++ CE+C  R    + L KH    H  ++ + C  C  +F  + NL + 
Sbjct: 1  KYICEECGIRXKKPSMLKKHIR-THTDVRPYHCTYCNFSFKTKGNLTKH 48

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A Length = 57

 Score = 39.3 bits (91), Expect = 2e-04
 Identities = 14/55 (25%), Positives = 18/55 (32%), Gaps = 1/55 (1%)

Query: 154 KFECYVCSKVLATSHSLKRHLLIHNGPK-YTCEICAKEFTRVYELNIHKKLHEDE 207
           K+ C  C         LK+H+  H   + Y C  C   F     L  H K     
Sbjct: 1   KYICEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSKAHS 55

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 73

 Score = 40.4 bits (94), Expect = 1e-04
 Identities = 16/68 (23%), Positives = 23/68 (33%), Gaps = 11/68 (16%)

Query: 165 ATSHSLKRHLLIHNGPK-YTCEICAKEFTRVYELNIHKKLHEDESVANQLKCEFCGKVFL 223
            +S S  +   IH G +   C  C   F R   L+  K             CE C K   
Sbjct: 1   GSSGSSGKRQKIHLGDRSQKCSKCGIIFIRRSTLSRRKTP----------MCEKCRKDSC 50

Query: 224 KKSNLKAH 231
           +++ L   
Sbjct: 51  QEAALNKD 58

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 73

 Score = 39.3 bits (91), Expect = 2e-04
 Identities = 14/64 (21%), Positives = 24/64 (37%), Gaps = 10/64 (15%)

Query: 29 SRENLMRHLKIHDDKESKRFKCEQCDKRFSSNAELNKHSSAIHQRLKLHECDLCGKNFSQ 88
          S  +  +  KIH     +  KC +C   F   + L++  +          C+ C K+  Q
Sbjct: 2  SSGSSGKRQKIHLG--DRSQKCSKCGIIFIRRSTLSRRKT--------PMCEKCRKDSCQ 51

Query: 89 RNNL 92
             L
Sbjct: 52 EAAL 55

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 73

 Score = 39.3 bits (91), Expect = 3e-04
 Identities = 17/75 (22%), Positives = 25/75 (33%), Gaps = 10/75 (13%)

Query: 107 SNAELNKHSSAIHQRLKLHECDLCGKNFSQRNNLKRHLEEVHRTDGMKFECYVCSKVLAT 166
           S+    K    IH   +  +C  CG  F +R+ L R              C  C K    
Sbjct: 2   SSGSSGKRQK-IHLGDRSQKCSKCGIIFIRRSTLSRR---------KTPMCEKCRKDSCQ 51

Query: 167 SHSLKRHLLIHNGPK 181
             +L +     +G K
Sbjct: 52  EAALNKDEGNESGKK 66

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 38.3 bits (90), Expect = 3e-04
 Identities = 11/31 (35%), Positives = 17/31 (54%), Gaps = 4/31 (12%)

Query: 117 AIHQRL----KLHECDLCGKNFSQRNNLKRH 143
                     K ++CD+CGK FSQ ++L+ H
Sbjct: 1   GSSGSSGMGEKCYKCDVCGKEFSQSSHLQTH 31

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 45

 Score = 37.5 bits (88), Expect = 5e-04
 Identities = 10/31 (32%), Positives = 12/31 (38%), Gaps = 4/31 (12%)

Query: 117 AIHQRL----KLHECDLCGKNFSQRNNLKRH 143
                     K  EC  CGK+F  + NL  H
Sbjct: 1   GSSGSSGTGQKPFECTHCGKSFRAKGNLVTH 31

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 37.5 bits (88), Expect = 6e-04
 Identities = 9/31 (29%), Positives = 14/31 (45%), Gaps = 4/31 (12%)

Query: 117 AIHQRL----KLHECDLCGKNFSQRNNLKRH 143
                     K +EC+ C K F+ ++NL  H
Sbjct: 1   GSSGSSGTGEKPYECNECQKAFNTKSNLMVH 31

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.5 bits (88), Expect = 6e-04
 Identities = 11/31 (35%), Positives = 15/31 (48%), Gaps = 4/31 (12%)

Query: 117 AIHQRL----KLHECDLCGKNFSQRNNLKRH 143
                     K  +CD+CGK+F  R+ L RH
Sbjct: 1   GSSGSSGTGEKPFKCDICGKSFCGRSRLNRH 31

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.1 bits (87), Expect = 8e-04
 Identities = 8/31 (25%), Positives = 14/31 (45%), Gaps = 4/31 (12%)

Query: 117 AIHQRL----KLHECDLCGKNFSQRNNLKRH 143
                     K ++C+ CGK ++ + NL  H
Sbjct: 1   GSSGSSGTGEKPYKCEKCGKGYNSKFNLDMH 31

>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A Length = 37

 Score = 36.5 bits (85), Expect = 9e-04
 Identities = 10/25 (40%), Positives = 16/25 (64%), Gaps = 1/25 (4%)

Query: 507 QCRICSKTFTRKDSLRKHMRRFHII 531
           QC  C ++F+R D L  H +R H++
Sbjct: 13  QCPDCDRSFSRSDHLALHRKR-HML 36

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.7 bits (86), Expect = 9e-04
 Identities = 9/31 (29%), Positives = 16/31 (51%), Gaps = 4/31 (12%)

Query: 117 AIHQRL----KLHECDLCGKNFSQRNNLKRH 143
                     K +EC +CGK+F++++ L  H
Sbjct: 1   GSSGSSGTGEKPYECSICGKSFTKKSQLHVH 31

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	843
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	100.0
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	99.97
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	99.95
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	99.94
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	99.89
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	99.89
2lt7_A	133	Transcriptional regulator kaiso; zinc finger, doub	99.84
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	99.84
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	99.82
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	99.81
2lt7_A	133	Transcriptional regulator kaiso; zinc finger, doub	99.8
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	99.78
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	99.78
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	99.78
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	99.78
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	99.77
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	99.65
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	99.65
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	99.64
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	99.64
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	99.64
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	99.64
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	99.63
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	99.61
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	99.6
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	99.6
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	99.59
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	99.59
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	99.59
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	99.58
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	99.58
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	99.57
4gzn_C	60	ZFP-57, zinc finger protein 57; transcription-DNA	99.57
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	99.56
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	99.55
4gzn_C	60	ZFP-57, zinc finger protein 57; transcription-DNA	99.52
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	99.52
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	99.51
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	99.5
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	99.5
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	99.47
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	99.45
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	99.45
2ghf_A	102	ZHX1, zinc fingers and homeoboxes protein 1; C2H2	99.44
2lv2_A	85	Insulinoma-associated protein 1; structural genomi	99.42
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	99.41
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	99.41
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	99.41
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	99.41
2ctd_A	96	Zinc finger protein 512; zinc binding, two ZF-C2H2	99.39
2gqj_A	98	Zinc finger protein KIAA1196; ZF-C2H2 like domain,	99.39
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	99.36
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	99.35
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	99.35
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	99.34
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	99.33
2gqj_A	98	Zinc finger protein KIAA1196; ZF-C2H2 like domain,	99.33
2lv2_A	85	Insulinoma-associated protein 1; structural genomi	99.32
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	99.31
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	99.3
2ghf_A	102	ZHX1, zinc fingers and homeoboxes protein 1; C2H2	99.28
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	99.28
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	99.28
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	99.26
2wbt_A	129	B-129; zinc finger; 2.70A {Sulfolobus virus 1}	99.26
3uk3_C	57	Zinc finger protein 217; transcription factor, DNA	99.26
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	99.26
2wbt_A	129	B-129; zinc finger; 2.70A {Sulfolobus virus 1}	99.23
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	99.23
2ctd_A	96	Zinc finger protein 512; zinc binding, two ZF-C2H2	99.23
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	99.22
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	99.2
3uk3_C	57	Zinc finger protein 217; transcription factor, DNA	99.19
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	99.19
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	99.18
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	99.18
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	99.14
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	99.14
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	99.1
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	99.05
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	99.05
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.04
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.04
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.04
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.04
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.04
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.03
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.03
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.03
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.03
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.03
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.03
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.03
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.03
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.02
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.02
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.02
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.02
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	99.02
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.02
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	99.02
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.02
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.02
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.02
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.02
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.02
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.02
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.01
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.01
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.01
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.01
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.01
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.01
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.01
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.01
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.01
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.0
2en8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.0
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.0
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	98.99
2yso_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.99
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	98.98
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.98
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.97
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.97
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.97
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	98.97
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	98.95
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	98.94
2eod_A	66	TNF receptor-associated factor 4; zinc binding, NF	98.94
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.93
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	98.93
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	98.89
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.88
2yte_A	42	Zinc finger protein 473; ZF-C2H2, structural genom	98.88
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.88
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.88
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.88
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.88
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.87
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	98.87
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.87
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.87
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.87
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.87
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.87
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.87
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.87
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.86
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.86
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.86
2eod_A	66	TNF receptor-associated factor 4; zinc binding, NF	98.86
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	98.86
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	98.86
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.86
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.86
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.86
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.86
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.86
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.86
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.86
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	98.86
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.86
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.86
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	98.86
2epq_A	45	POZ-, at HOOK-, and zinc finger-containing protein	98.86
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.86
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.85
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.85
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.85
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	98.85
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.85
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.85
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	98.85
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.85
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.85
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	98.85
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.85
2en8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.85
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	98.85
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.85
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.85
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	98.85
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.85
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.85
2epa_A	72	Krueppel-like factor 10; transforming growth facto	98.84
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.84
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	98.84
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.84
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.84
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.84
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.84
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.84
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.84
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.84
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.84
2epr_A	48	POZ-, at HOOK-, and zinc finger-containing protein	98.84
2epa_A	72	Krueppel-like factor 10; transforming growth facto	98.84
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.84
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.84
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.84
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	98.84
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.83
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.83
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.83
1vd4_A	62	Transcription initiation factor IIE, alpha subunit	98.83
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	98.82
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.82
2yso_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.82
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.82
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.82
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	98.82
2emb_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	98.82
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	98.81
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	98.81
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	98.81
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.81
2epc_A	42	Zinc finger protein 32; zinc finger domain, C2H2,	98.81
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.8
1vd4_A	62	Transcription initiation factor IIE, alpha subunit	98.8
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	98.8
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.8
2yu5_A	44	Zinc finger protein 473; ZF-C2H2 domain, structura	98.79
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	98.79
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.78
2eou_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	98.78
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.78
2eoy_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.78
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.76
2yrm_A	43	B-cell lymphoma 6 protein; ZF-C2H2, zinc binding,	98.73
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.73
2ent_A	48	Krueppel-like factor 15; zinc binding, transcripti	98.72
2eox_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	98.72
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	98.72
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.71
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	98.7
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	98.7
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.69
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.69
2yte_A	42	Zinc finger protein 473; ZF-C2H2, structural genom	98.69
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.68
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.68
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.68
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.68
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.67
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.67
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.67
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.67
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.67
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	98.67
2ept_A	41	Zinc finger protein 32; C2H2, zinc finger domain,	98.66
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.66
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.66
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.66
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.66
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.66
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.66
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.66
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.66
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.65
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.65
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	98.65
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.65
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.64
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.64
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.63
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.63
2epq_A	45	POZ-, at HOOK-, and zinc finger-containing protein	98.62
2eoy_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.62
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.61
2epr_A	48	POZ-, at HOOK-, and zinc finger-containing protein	98.61
1yui_A	54	GAGA-factor; complex (DNA-binding protein/DNA), ch	98.61
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	98.61
2yu5_A	44	Zinc finger protein 473; ZF-C2H2 domain, structura	98.61
2emb_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	98.61
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.6
1yui_A	54	GAGA-factor; complex (DNA-binding protein/DNA), ch	98.59
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.59
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	98.59
2epc_A	42	Zinc finger protein 32; zinc finger domain, C2H2,	98.58
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	98.57
2eou_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	98.56
2eox_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	98.55
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.54
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	98.53
1p7a_A	37	BF3, BKLF, kruppel-like factor 3; classical zinc f	98.5
2ent_A	48	Krueppel-like factor 15; zinc binding, transcripti	98.49
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.48
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	98.48
2d9k_A	75	FLN29 gene product; zinc finger, ZF-TRAF, structur	98.48
2yrm_A	43	B-cell lymphoma 6 protein; ZF-C2H2, zinc binding,	98.46
2d9k_A	75	FLN29 gene product; zinc finger, ZF-TRAF, structur	98.44
1njq_A	39	Superman protein; zinc-finger, peptide-zinc comple	98.39
2ept_A	41	Zinc finger protein 32; C2H2, zinc finger domain,	98.36
2elo_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.35
1x3c_A	73	Zinc finger protein 292; DNA binding, nuclear prot	98.32
2eln_A	38	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.31
1x6f_A	88	Zinc finger protein 462; zinc finger domain, KIAA1	98.31
1x3c_A	73	Zinc finger protein 292; DNA binding, nuclear prot	98.27
1srk_A	35	Zinc finger protein ZFPM1; classical zinc finger,	98.25
2elx_A	35	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.25
1fv5_A	36	First zinc finger of U-shaped; CCHC, protein inter	98.2
2elm_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.2
1rim_A	33	E6APC2 peptide; E6-binding domain, zinc finger, hu	98.19
1p7a_A	37	BF3, BKLF, kruppel-like factor 3; classical zinc f	98.18
2elo_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.16
2elq_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.14
2elv_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.13
2elt_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.12
1njq_A	39	Superman protein; zinc-finger, peptide-zinc comple	98.11
2elp_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.1
2elr_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.1
1rim_A	33	E6APC2 peptide; E6-binding domain, zinc finger, hu	98.09
2elx_A	35	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.05
3iuf_A	48	Zinc finger protein UBI-D4; structural genomics co	98.04
2eln_A	38	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.04
1srk_A	35	Zinc finger protein ZFPM1; classical zinc finger,	98.03
1bhi_A	38	CRE-BP1, ATF-2; CRE binding protein, transcription	98.03
2els_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.02
1x6f_A	88	Zinc finger protein 462; zinc finger domain, KIAA1	98.0
1fv5_A	36	First zinc finger of U-shaped; CCHC, protein inter	97.98
2elm_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	97.93
2epp_A	66	POZ-, at HOOK-, and zinc finger-containing protein	97.91
2elt_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	97.88
2elp_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	97.87
2elq_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	97.87
2kvg_A	27	Zinc finger and BTB domain-containing protein 32;	97.86
2kvh_A	27	Zinc finger and BTB domain-containing protein 32;	97.86
1va1_A	37	Transcription factor SP1; C2H2 type zinc finger, D	97.85
2kvf_A	28	Zinc finger and BTB domain-containing protein 32;	97.85
2kfq_A	32	FP1; protein, de novo protein; NMR {Synthetic}	97.85
2kfq_A	32	FP1; protein, de novo protein; NMR {Synthetic}	97.84
2epp_A	66	POZ-, at HOOK-, and zinc finger-containing protein	97.83
2elv_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	97.8
1znf_A	27	31ST zinc finger from XFIN; zinc finger DNA bindin	97.79
2els_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	97.78
2elr_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	97.78
3iuf_A	48	Zinc finger protein UBI-D4; structural genomics co	97.78
2m0d_A	30	Zinc finger and BTB domain-containing protein 17;	97.76
1ard_A	29	Yeast transcription factor ADR1; transcription reg	97.76
1rik_A	29	E6APC1 peptide; E6-binding domain, zinc finger, hu	97.72
2m0d_A	30	Zinc finger and BTB domain-containing protein 17;	97.71
1ard_A	29	Yeast transcription factor ADR1; transcription reg	97.69
2kvf_A	28	Zinc finger and BTB domain-containing protein 32;	97.69
2lvu_A	26	Zinc finger and BTB domain-containing protein 17;	96.86
1bhi_A	38	CRE-BP1, ATF-2; CRE binding protein, transcription	97.67
2kvh_A	27	Zinc finger and BTB domain-containing protein 32;	97.67
2m0f_A	29	Zinc finger and BTB domain-containing protein 17;	97.67
2kvg_A	27	Zinc finger and BTB domain-containing protein 32;	97.66
1rik_A	29	E6APC1 peptide; E6-binding domain, zinc finger, hu	97.66
1znf_A	27	31ST zinc finger from XFIN; zinc finger DNA bindin	97.65
2lvu_A	26	Zinc finger and BTB domain-containing protein 17;	96.82
1ncs_A	47	Peptide M30F, transcriptional factor SWI5; DNA bin	97.65
1sp2_A	31	SP1F2; zinc finger, transcription activation; NMR	97.64
2lvt_A	29	Zinc finger and BTB domain-containing protein 17;	96.79
1va1_A	37	Transcription factor SP1; C2H2 type zinc finger, D	97.62
2lvr_A	30	Zinc finger and BTB domain-containing protein 17;	96.77
1zfd_A	32	SWI5; DNA binding motif, zinc finger DNA binding d	97.6
1sp2_A	31	SP1F2; zinc finger, transcription activation; NMR	97.58
2m0e_A	29	Zinc finger and BTB domain-containing protein 17;	97.58
2m0f_A	29	Zinc finger and BTB domain-containing protein 17;	97.56
1klr_A	30	Zinc finger Y-chromosomal protein; transcription;	97.56
1ncs_A	47	Peptide M30F, transcriptional factor SWI5; DNA bin	97.55
1paa_A	30	Yeast transcription factor ADR1; transcription reg	97.55
2lvt_A	29	Zinc finger and BTB domain-containing protein 17;	96.69
1zfd_A	32	SWI5; DNA binding motif, zinc finger DNA binding d	97.52
2m0e_A	29	Zinc finger and BTB domain-containing protein 17;	97.52
1klr_A	30	Zinc finger Y-chromosomal protein; transcription;	97.48
2lvr_A	30	Zinc finger and BTB domain-containing protein 17;	96.6
1paa_A	30	Yeast transcription factor ADR1; transcription reg	97.42
2ab3_A	29	ZNF29; zinc finger protein, beta BETA alpha, RREII	97.4
1zw8_A	64	Zinc-responsive transcriptional regulator ZAP1; in	97.26
2ab3_A	29	ZNF29; zinc finger protein, beta BETA alpha, RREII	97.22
1zw8_A	64	Zinc-responsive transcriptional regulator ZAP1; in	97.13
1zu1_A	127	DSRBP-ZFA, RNA binding protein ZFA; zinc finger pr	96.06
1zu1_A	127	DSRBP-ZFA, RNA binding protein ZFA; zinc finger pr	95.78
2e72_A	49	POGO transposable element with ZNF domain; zinc fi	95.34
1zr9_A	124	Zinc finger protein 593; DNA binding, structural g	95.24
2e72_A	49	POGO transposable element with ZNF domain; zinc fi	94.96
1zr9_A	124	Zinc finger protein 593; DNA binding, structural g	94.64
3mjh_B	34	Early endosome antigen 1; protein-zinc finger comp	94.07
3mjh_B	34	Early endosome antigen 1; protein-zinc finger comp	93.7
3hcs_A	170	TNF receptor-associated factor 6; cross-brace, bet	92.14
2elu_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	87.63
3hcs_A	170	TNF receptor-associated factor 6; cross-brace, bet	87.18
2k5c_A	95	Uncharacterized protein PF0385; structural genomic	87.12
2elu_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	85.81
1fu9_A	36	U-shaped transcriptional cofactor; zinc-finger, be	82.83
1fu9_A	36	U-shaped transcriptional cofactor; zinc-finger, be	81.63
2jsp_A	87	Transcriptional regulatory protein ROS; prokaryoti	80.65

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C*

Probab=100.00  E-value=1.8e-33  Score=262.87  Aligned_cols=180  Identities=33%  Similarity=0.608  Sum_probs=134.4

Q ss_pred             HHHHHHHhhcCCCCccccccchhhcCCHHHHHHHHhhccCCCCCcccccccccccCCHHHHHHhHHhhccCCCceeCCCC
Q psy8169           3 MIISEHIKSHEYVENHMCELCYKVFESRENLMRHLKIHDDKESKRFKCEQCDKRFSSNAELNKHSSAIHQRLKLHECDLC   82 (843)
Q Consensus         3 ~~l~~h~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~C~~C   82 (843)
                      ..|..|+++|.++++|.|++|+++|.+...|..|+++|.+  .++|.|+.|++.|.+...|..|+ ..|.+.++|.|+.|
T Consensus         7 ~~l~~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~--~~~~~C~~C~~~f~~~~~l~~H~-~~h~~~~~~~C~~C   83 (190)
T 2i13_A            7 SSSVAQAALEPGEKPYACPECGKSFSRSDHLAEHQRTHTG--EKPYKCPECGKSFSDKKDLTRHQ-RTHTGEKPYKCPEC   83 (190)
T ss_dssp             ------------------------CCSSHHHHHGGGCC-----CCEECTTTCCEESSHHHHHHHH-HHHHCCCCEECTTT
T ss_pred             ccchhhhhhcCCCCCCcCCCCccccCCHHHHHHHHHHcCC--CCCccCCCcCchhCCHHHHHHHH-HhcCCCCCccCccc
Confidence            3577889999999999999999999999999999999987  58999999999999999999998 66888899999999


Q ss_pred             CCcccchhhHHhhhcCCCCCCCCCChHHHhhhhhhhhcCCCcccCCcchhccCChhHHHHhHhhhcCCCCcccccccccc
Q psy8169          83 GKNFSQRNNLKRQANGSNVNNRFSSNAELNKHSSAIHQRLKLHECDLCGKNFSQRNNLKRHLEEVHRTDGMKFECYVCSK  162 (843)
Q Consensus        83 ~~~f~~~~~l~~H~~~~~~~~~~~~~~~l~~h~~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~C~~C~~  162 (843)
                      ++.|....+|..|+                    ..|.+.++|.|..|++.|.+...|..|++ .| .++++|.|++|++
T Consensus        84 ~~~f~~~~~l~~H~--------------------~~h~~~~~~~C~~C~~~f~~~~~l~~H~~-~h-~~~~~~~C~~C~~  141 (190)
T 2i13_A           84 GKSFSQRANLRAHQ--------------------RTHTGEKPYACPECGKSFSQLAHLRAHQR-TH-TGEKPYKCPECGK  141 (190)
T ss_dssp             CCEESCHHHHHHHH--------------------HHHHTCCCEECTTTCCEESSHHHHHHHHH-HH-HCCCCEECTTTCC
T ss_pred             CCccCCHHHHHHHH--------------------HhcCCCCCCcCCCCCCccCCHHHHHHHHH-Hh-CCCCCeECCCCCc
Confidence            99999999887776                    56777889999999999999999999998 45 5778899999999


Q ss_pred             cccCHHHHHHHHhhcCCCc-ccccchhHhhcCHHHHHHHHhhccCc
Q psy8169         163 VLATSHSLKRHLLIHNGPK-YTCEICAKEFTRVYELNIHKKLHEDE  207 (843)
Q Consensus       163 ~f~~~~~l~~H~~~h~~~~-~~C~~C~~~f~~~~~L~~H~~~h~~~  207 (843)
                      .|.+...|..|+++|.+.+ |.|++|++.|.+...|..|+++|+++
T Consensus       142 ~f~~~~~L~~H~~~H~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~  187 (190)
T 2i13_A          142 SFSREDNLHTHQRTHTGEKPYKCPECGKSFSRRDALNVHQRTHTGK  187 (190)
T ss_dssp             EESCHHHHHHHHHHHHCCCCEECTTTCCEESSHHHHHHHHTTC---
T ss_pred             ccCCHHHHHHHHHhcCCCCCeECCCCCCccCCHHHHHHHHHhcCCC
Confidence            9999999999999998754 99999999999999999999999886

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C*

Probab=99.97  E-value=2.1e-31  Score=248.74  Aligned_cols=177  Identities=33%  Similarity=0.654  Sum_probs=138.8

Q ss_pred             HHHHHHHHhhccCCCCCcccccccccccCCHHHHHHhHHhhccCCCceeCCCCCCcccchhhHHhhhcCCCCCCCCCChH
Q psy8169          30 RENLMRHLKIHDDKESKRFKCEQCDKRFSSNAELNKHSSAIHQRLKLHECDLCGKNFSQRNNLKRQANGSNVNNRFSSNA  109 (843)
Q Consensus        30 ~~~l~~H~~~h~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~  109 (843)
                      ...|..|+..|.+  +++|.|+.|++.|.+...|..|+ ..|.+.++|.|+.|++.|.....|.+|+             
T Consensus         6 ~~~l~~h~~~~~~--~~~~~C~~C~~~f~~~~~l~~H~-~~h~~~~~~~C~~C~~~f~~~~~l~~H~-------------   69 (190)
T 2i13_A            6 SSSSVAQAALEPG--EKPYACPECGKSFSRSDHLAEHQ-RTHTGEKPYKCPECGKSFSDKKDLTRHQ-------------   69 (190)
T ss_dssp             ---------------------------CCSSHHHHHGG-GCC---CCEECTTTCCEESSHHHHHHHH-------------
T ss_pred             hccchhhhhhcCC--CCCCcCCCCccccCCHHHHHHHH-HHcCCCCCccCCCcCchhCCHHHHHHHH-------------
Confidence            5678899999987  58999999999999999999998 6788999999999999999999997776             


Q ss_pred             HHhhhhhhhhcCCCcccCCcchhccCChhHHHHhHhhhcCCCCcccccccccccccCHHHHHHHHhhcCCCc-ccccchh
Q psy8169         110 ELNKHSSAIHQRLKLHECDLCGKNFSQRNNLKRHLEEVHRTDGMKFECYVCSKVLATSHSLKRHLLIHNGPK-YTCEICA  188 (843)
Q Consensus       110 ~l~~h~~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~-~~C~~C~  188 (843)
                             ..|.+.++|.|+.|++.|.+...|..|++. | .++++|.|++|++.|.+...|..|+++|.+.+ |.|++|+
T Consensus        70 -------~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~-h-~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~  140 (190)
T 2i13_A           70 -------RTHTGEKPYKCPECGKSFSQRANLRAHQRT-H-TGEKPYACPECGKSFSQLAHLRAHQRTHTGEKPYKCPECG  140 (190)
T ss_dssp             -------HHHHCCCCEECTTTCCEESCHHHHHHHHHH-H-HTCCCEECTTTCCEESSHHHHHHHHHHHHCCCCEECTTTC
T ss_pred             -------HhcCCCCCccCcccCCccCCHHHHHHHHHh-c-CCCCCCcCCCCCCccCCHHHHHHHHHHhCCCCCeECCCCC
Confidence                   567788999999999999999999999984 5 56789999999999999999999999998865 9999999


Q ss_pred             HhhcCHHHHHHHHhhccCccccCccccCcccccccchhhHHHhhhh
Q psy8169         189 KEFTRVYELNIHKKLHEDESVANQLKCEFCGKVFLKKSNLKAHIEN  234 (843)
Q Consensus       189 ~~f~~~~~L~~H~~~h~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~  234 (843)
                      +.|.+...|..|+++|+++   ++|.|++|++.|.+...|..|++.
T Consensus       141 ~~f~~~~~L~~H~~~H~~~---~~~~C~~C~~~f~~~~~L~~H~~~  183 (190)
T 2i13_A          141 KSFSREDNLHTHQRTHTGE---KPYKCPECGKSFSRRDALNVHQRT  183 (190)
T ss_dssp             CEESCHHHHHHHHHHHHCC---CCEECTTTCCEESSHHHHHHHHTT
T ss_pred             cccCCHHHHHHHHHhcCCC---CCeECCCCCCccCCHHHHHHHHHh
Confidence            9999999999999999987   899999999999999999999854

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A

Probab=99.95  E-value=2.2e-28  Score=228.32  Aligned_cols=170  Identities=31%  Similarity=0.530  Sum_probs=143.7

Q ss_pred             hcCCCCcccc--ccchhhcCCHHHHHHHHhhccCCCCCcccc--cccccccCCHHHHHHhHHhhccCCCceeCC--CCCC
Q psy8169          11 SHEYVENHMC--ELCYKVFESRENLMRHLKIHDDKESKRFKC--EQCDKRFSSNAELNKHSSAIHQRLKLHECD--LCGK   84 (843)
Q Consensus        11 ~h~~~~~~~C--~~C~~~f~~~~~l~~H~~~h~~~~~~~~~C--~~C~~~f~~~~~l~~H~~~~h~~~~~~~C~--~C~~   84 (843)
                      ...+.++|.|  +.|+++|.+...|..|+++|.+  +++|.|  +.|++.|.+...|..|+ ..|.++++|.|+  .|++
T Consensus         6 ~~~~~~~~~C~~~~C~~~f~~~~~L~~H~~~h~~--~~~~~C~~~~C~~~f~~~~~l~~H~-~~h~~~~~~~C~~~~C~~   82 (190)
T 1tf6_A            6 LPVVYKRYICSFADCGAAYNKNWKLQAHLCKHTG--EKPFPCKEEGCEKGFTSLHHLTRHS-LTHTGEKNFTCDSDGCDL   82 (190)
T ss_dssp             ----CCCCBCSSTTTCCBCSSHHHHHHHHHHHHC--CCSSCCSSTTCCCCCSSHHHHHHHH-TTTTTCCCEECCSSSCCC
T ss_pred             ccCCCcceeCCCCCCcchhCCHHHHHHHHHhcCC--CCCccCCCCCCChhhCCHHHHHHHH-HHccCCCceeCCCCCCCC
Confidence            3456788999  6899999999999999999987  589999  88999999999999998 678888999999  8999


Q ss_pred             cccchhhHHhhhcCCCCCCCCCChHHHhhhhhhhh-cCCCcccC--CcchhccCChhHHHHhHhhhcCCCCccccccc--
Q psy8169          85 NFSQRNNLKRQANGSNVNNRFSSNAELNKHSSAIH-QRLKLHEC--DLCGKNFSQRNNLKRHLEEVHRTDGMKFECYV--  159 (843)
Q Consensus        85 ~f~~~~~l~~H~~~~~~~~~~~~~~~l~~h~~~~h-~~~~~~~C--~~C~~~f~~~~~l~~H~~~~h~~~~~~~~C~~--  159 (843)
                      .|.+..+|.+|+.                   ..| .+.++|.|  ..|++.|.+...|..|++ .| .++++|.|++  
T Consensus        83 ~f~~~~~l~~H~~-------------------~~h~~~~~~~~C~~~~C~k~f~~~~~L~~H~~-~H-~~~~~~~C~~~~  141 (190)
T 1tf6_A           83 RFTTKANMKKHFN-------------------RFHNIKICVYVCHFENCGKAFKKHNQLKVHQF-SH-TQQLPYECPHEG  141 (190)
T ss_dssp             EESCHHHHHHHHH-------------------TTSSTTTSCCEECSSSSCEECSSHHHHHHHHG-GG-SSSCSSBCCSSS
T ss_pred             ccCCHHHHHHHHH-------------------HhcCCCcceeeCCCCCCccccCCHHHHHHHHH-Hh-CCCCCccCCCCC
Confidence            9999988876652                   445 45678999  889999999999999988 45 6778899977  


Q ss_pred             ccccccCHHHHHHHHhhcCCCcccccc---hhHhhcCHHHHHHHHhhccC
Q psy8169         160 CSKVLATSHSLKRHLLIHNGPKYTCEI---CAKEFTRVYELNIHKKLHED  206 (843)
Q Consensus       160 C~~~f~~~~~l~~H~~~h~~~~~~C~~---C~~~f~~~~~L~~H~~~h~~  206 (843)
                      |++.|.+...|..|+++|.+  |.|..   |++.|.+...|..|+++|++
T Consensus       142 C~k~F~~~~~L~~H~~~H~~--~~C~~~~~C~~~f~~~~~l~~H~~~h~~  189 (190)
T 1tf6_A          142 CDKRFSLPSRLKRHEKVHAG--YPCKKDDSCSFVGKTWTLYLKHVAECHQ  189 (190)
T ss_dssp             CCCBCSSHHHHHHHHTSSCS--CCCCSTTTCCCCCSCHHHHHHHHTTCC-
T ss_pred             CCchhcCHHHHHHHHHHhCC--CcCCCCCcCCCccccHHHHHHHHHhhcC
Confidence            99999999999999999888  88888   99999999999999988875

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A

Probab=99.94  E-value=5.1e-27  Score=219.00  Aligned_cols=165  Identities=28%  Similarity=0.532  Sum_probs=148.8

Q ss_pred             CCcccc--cccccccCCHHHHHHhHHhhccCCCceeC--CCCCCcccchhhHHhhhcCCCCCCCCCChHHHhhhhhhhhc
Q psy8169          45 SKRFKC--EQCDKRFSSNAELNKHSSAIHQRLKLHEC--DLCGKNFSQRNNLKRQANGSNVNNRFSSNAELNKHSSAIHQ  120 (843)
Q Consensus        45 ~~~~~C--~~C~~~f~~~~~l~~H~~~~h~~~~~~~C--~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~~l~~h~~~~h~  120 (843)
                      .++|.|  +.|++.|.+...|..|+ ..|.++++|.|  +.|++.|.+..+|.+|+                    .+|.
T Consensus        10 ~~~~~C~~~~C~~~f~~~~~L~~H~-~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~--------------------~~h~   68 (190)
T 1tf6_A           10 YKRYICSFADCGAAYNKNWKLQAHL-CKHTGEKPFPCKEEGCEKGFTSLHHLTRHS--------------------LTHT   68 (190)
T ss_dssp             CCCCBCSSTTTCCBCSSHHHHHHHH-HHHHCCCSSCCSSTTCCCCCSSHHHHHHHH--------------------TTTT
T ss_pred             CcceeCCCCCCcchhCCHHHHHHHH-HhcCCCCCccCCCCCCChhhCCHHHHHHHH--------------------HHcc
Confidence            589999  68999999999999998 67889999999  88999999999997776                    5677


Q ss_pred             CCCcccCC--cchhccCChhHHHHhHhhhcCCCCccccc--ccccccccCHHHHHHHHhhcCCCc-ccccc--hhHhhcC
Q psy8169         121 RLKLHECD--LCGKNFSQRNNLKRHLEEVHRTDGMKFEC--YVCSKVLATSHSLKRHLLIHNGPK-YTCEI--CAKEFTR  193 (843)
Q Consensus       121 ~~~~~~C~--~C~~~f~~~~~l~~H~~~~h~~~~~~~~C--~~C~~~f~~~~~l~~H~~~h~~~~-~~C~~--C~~~f~~  193 (843)
                      +.++|.|.  .|++.|.+...|..|++..|..+..+|.|  ..|++.|.+...|..|+++|.+.+ |.|++  |++.|.+
T Consensus        69 ~~~~~~C~~~~C~~~f~~~~~l~~H~~~~h~~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~~~C~k~F~~  148 (190)
T 1tf6_A           69 GEKNFTCDSDGCDLRFTTKANMKKHFNRFHNIKICVYVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSL  148 (190)
T ss_dssp             TCCCEECCSSSCCCEESCHHHHHHHHHTTSSTTTSCCEECSSSSCEECSSHHHHHHHHGGGSSSCSSBCCSSSCCCBCSS
T ss_pred             CCCceeCCCCCCCCccCCHHHHHHHHHHhcCCCcceeeCCCCCCccccCCHHHHHHHHHHhCCCCCccCCCCCCCchhcC
Confidence            88999999  89999999999999996577567789999  889999999999999999999865 99988  9999999


Q ss_pred             HHHHHHHHhhccCccccCccccCc---ccccccchhhHHHhhhhcC
Q psy8169         194 VYELNIHKKLHEDESVANQLKCEF---CGKVFLKKSNLKAHIENNH  236 (843)
Q Consensus       194 ~~~L~~H~~~h~~~~~~~~~~C~~---C~~~f~~~~~l~~H~~~~H  236 (843)
                      ...|..|+++|++      |.|..   |++.|.+...|..|++..|
T Consensus       149 ~~~L~~H~~~H~~------~~C~~~~~C~~~f~~~~~l~~H~~~h~  188 (190)
T 1tf6_A          149 PSRLKRHEKVHAG------YPCKKDDSCSFVGKTWTLYLKHVAECH  188 (190)
T ss_dssp             HHHHHHHHTSSCS------CCCCSTTTCCCCCSCHHHHHHHHTTCC
T ss_pred             HHHHHHHHHHhCC------CcCCCCCcCCCccccHHHHHHHHHhhc
Confidence            9999999999875      88999   9999999999999986544

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.89  E-value=1.6e-23  Score=188.25  Aligned_cols=141  Identities=28%  Similarity=0.538  Sum_probs=114.7

Q ss_pred             CCccccccchhhcCCHHHHHHHHh---hccCCCCCccccccc-----ccccCCHHHHHHhHHhhccCCCceeCCC--CCC
Q psy8169          15 VENHMCELCYKVFESRENLMRHLK---IHDDKESKRFKCEQC-----DKRFSSNAELNKHSSAIHQRLKLHECDL--CGK   84 (843)
Q Consensus        15 ~~~~~C~~C~~~f~~~~~l~~H~~---~h~~~~~~~~~C~~C-----~~~f~~~~~l~~H~~~~h~~~~~~~C~~--C~~   84 (843)
                      +.+|.|+.|+++|.+...|..|++   +|.+  .++|.|+.|     ++.|.+...|..|+ ..|.+.++|.|++  |++
T Consensus         1 E~~~~C~~C~~~f~~~~~L~~H~~~~h~h~~--~~~~~C~~c~C~~c~~~f~~~~~l~~H~-~~h~~~~~~~C~~~~C~~   77 (155)
T 2gli_A            1 ETDCRWDGCSQEFDSQEQLVHHINSEHIHGE--RKEFVCHWGGCSRELRPFKAQYMLVVHM-RRHTGEKPHKCTFEGCRK   77 (155)
T ss_dssp             CCBCCBTTCCCBCSCHHHHHHHHHHHTSSSC--SSCCCCCBTTCTTTTCCCSSHHHHHHHT-HHHHCCCCCCCCSTTCCC
T ss_pred             CCcCCcCCCccccCCHHHHHHHHHhhccCCC--CcceeCCCCCccchhhhhhhHHHHHHHH-HhcCCCCCccCCCCCCCC
Confidence            357899999999999999999998   5655  588988753     48888888899997 5677888888875  888


Q ss_pred             cccchhhHHhhhcCCCCCCCCCChHHHhhhhhhhhcCCCcccCCc--chhccCChhHHHHhHhhhcCCCCccccccc--c
Q psy8169          85 NFSQRNNLKRQANGSNVNNRFSSNAELNKHSSAIHQRLKLHECDL--CGKNFSQRNNLKRHLEEVHRTDGMKFECYV--C  160 (843)
Q Consensus        85 ~f~~~~~l~~H~~~~~~~~~~~~~~~l~~h~~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~~h~~~~~~~~C~~--C  160 (843)
                      .|.....|.+|+                    +.|.+.++|.|+.  |++.|.+...|..|++..| .++++|.|.+  |
T Consensus        78 ~f~~~~~l~~H~--------------------~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~~H-~~~~~~~C~~~~C  136 (155)
T 2gli_A           78 SYSRLENLKTHL--------------------RSHTGEKPYMCEHEGCSKAFSNASDRAKHQNRTH-SNEKPYVCKLPGC  136 (155)
T ss_dssp             CCSSHHHHHHHH--------------------HHTTTCCCEECCSTTCCCEESSSSTTHHHHHHTT-CSCCCEECCSTTT
T ss_pred             cccCHHHHHHHH--------------------HHcCCCCCeeCCCCCCCCccCCHHHHHHHHHHhc-CCCCCeeCCCCCC
Confidence            888888886665                    5677778888887  8888888888888885466 6777888887  8


Q ss_pred             cccccCHHHHHHHHhhcCC
Q psy8169         161 SKVLATSHSLKRHLLIHNG  179 (843)
Q Consensus       161 ~~~f~~~~~l~~H~~~h~~  179 (843)
                      ++.|.+...|..|+++|+|
T Consensus       137 ~~~f~~~~~L~~H~~~hhg  155 (155)
T 2gli_A          137 TKRYTDPSSLRKHVKTVHG  155 (155)
T ss_dssp             CCEESSHHHHHHHHHHSCC
T ss_pred             ccccCCHHHHHHHHHhhcC
Confidence            8888888888888888875

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.89  E-value=1.2e-23  Score=189.03  Aligned_cols=141  Identities=34%  Similarity=0.675  Sum_probs=124.4

Q ss_pred             ccccccccccCChHHHHHHHhhhccccCcchhhhhhhhhhhhhhhHHHHhhcccCCCCCcccccc-----cccccchHHH
Q psy8169         506 IQCRICSKTFTRKDSLRKHMRRFHIINDTNVKKEFTEGQINRNMLDVILKESGHEIKSRIPCELC-----YKTFTRKDSL  580 (843)
Q Consensus       506 ~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~C-----~~~f~~~~~L  580 (843)
                      |.|+.|++.|.+...|..|++..|.                            |.+.++|.|.+|     ++.|.+...|
T Consensus         4 ~~C~~C~~~f~~~~~L~~H~~~~h~----------------------------h~~~~~~~C~~c~C~~c~~~f~~~~~l   55 (155)
T 2gli_A            4 CRWDGCSQEFDSQEQLVHHINSEHI----------------------------HGERKEFVCHWGGCSRELRPFKAQYML   55 (155)
T ss_dssp             CCBTTCCCBCSCHHHHHHHHHHHTS----------------------------SSCSSCCCCCBTTCTTTTCCCSSHHHH
T ss_pred             CCcCCCccccCCHHHHHHHHHhhcc----------------------------CCCCcceeCCCCCccchhhhhhhHHHH
Confidence            9999999999999999999997553                            555789988753     4999999999


Q ss_pred             HHHHHHhhccCCCCCCCCCCCCCCCcchhhhccCCcccccCccccCcccccCCCcccccCCcCCCccccCCCCCCCCCCC
Q psy8169         581 RKHMKIFHTRRNPSANSGNSGTSAPPAVKLEQNGGEKVENSTSVENSTSVENSTSVENSANVENTSSVDNRTSVGPVAPI  660 (843)
Q Consensus       581 ~~H~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~  660 (843)
                      ..|++.+++                          .+                                      |    
T Consensus        56 ~~H~~~h~~--------------------------~~--------------------------------------~----   67 (155)
T 2gli_A           56 VVHMRRHTG--------------------------EK--------------------------------------P----   67 (155)
T ss_dssp             HHHTHHHHC--------------------------CC--------------------------------------C----
T ss_pred             HHHHHhcCC--------------------------CC--------------------------------------C----
Confidence            999999543                          11                                      3    


Q ss_pred             CCCCCcc--ccccccchhhhhhhhhccccCCCCCCccchhhcccccccccccccccccc--hhhhhhhHHHHhhhhhhhc
Q psy8169         661 DRIPCTL--CDKTFTRKDSLKKHIRIFHTQNQPQHTNVIEVALGARANAAFIDRIRCEL--CDKSFTRKDSLKKHNRIFH  736 (843)
Q Consensus       661 ~~~~C~~--C~~~f~~~~~L~~H~~~~H~~~~p~~~~~~~~~~~~~~~~~~~~~~~C~~--C~~~f~~~~~L~~H~~~~H  736 (843)
                        |.|++  |++.|.+...|..|++. |.+++|                     |+|++  |++.|.+...|..|++..|
T Consensus        68 --~~C~~~~C~~~f~~~~~l~~H~~~-h~~~~~---------------------~~C~~~~C~~~f~~~~~L~~H~~~~H  123 (155)
T 2gli_A           68 --HKCTFEGCRKSYSRLENLKTHLRS-HTGEKP---------------------YMCEHEGCSKAFSNASDRAKHQNRTH  123 (155)
T ss_dssp             --CCCCSTTCCCCCSSHHHHHHHHHH-TTTCCC---------------------EECCSTTCCCEESSSSTTHHHHHHTT
T ss_pred             --ccCCCCCCCCcccCHHHHHHHHHH-cCCCCC---------------------eeCCCCCCCCccCCHHHHHHHHHHhc
Confidence              99986  99999999999999998 888888                     99999  9999999999999995556


Q ss_pred             CCCCCCcchhhhhcCCcceeeeeecCCCCCCCCccccchhhch--hhhhhhhhhhHHHHHhHhhc
Q psy8169         737 GGADPKVMDEQMARGSADFLEVVLNEDGEGEPVSITNEILCKI--CNRTFTRNYNLKKHMKTVHK  799 (843)
Q Consensus       737 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~--C~~~F~~~~~L~~H~~~~H~  799 (843)
                      .++++                                 |.|++  ||+.|.+.+.|..|++++|+
T Consensus       124 ~~~~~---------------------------------~~C~~~~C~~~f~~~~~L~~H~~~hhg  155 (155)
T 2gli_A          124 SNEKP---------------------------------YVCKLPGCTKRYTDPSSLRKHVKTVHG  155 (155)
T ss_dssp             CSCCC---------------------------------EECCSTTTCCEESSHHHHHHHHHHSCC
T ss_pred             CCCCC---------------------------------eeCCCCCCccccCCHHHHHHHHHhhcC
Confidence            65777                                 99999  99999999999999999986

>2lt7_A Transcriptional regulator kaiso; zinc finger, double helix, metal binding protein-DNA complex; HET: DNA; NMR {Homo sapiens} PDB: 4f6m_A* 4f6n_A*

Probab=99.84  E-value=5.4e-22  Score=169.24  Aligned_cols=114  Identities=21%  Similarity=0.329  Sum_probs=95.1

Q ss_pred             HHHhhcCCCCccccccchhhcCCHHHHHHHHhhccCCCCCcccccccccccCCHHHHHHhHHhhccCCCceeCCCCCCcc
Q psy8169           7 EHIKSHEYVENHMCELCYKVFESRENLMRHLKIHDDKESKRFKCEQCDKRFSSNAELNKHSSAIHQRLKLHECDLCGKNF   86 (843)
Q Consensus         7 ~h~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~C~~C~~~f   86 (843)
                      .|.++|.|+++|.|++|+++|.+...|..|+++|.+  ++||.|+.|++.|.+...|..|+ .+|.+++||.|++|++.|
T Consensus        12 h~~~~h~Gek~y~C~~C~k~F~~~~~L~~H~~~H~~--~k~~~C~~C~k~F~~~~~L~~H~-~~H~~~k~~~C~~C~k~F   88 (133)
T 2lt7_A           12 HYELIVDGRVYYICIVCKRSYVCLTSLRRHFNIHSW--EKKYPCRYCEKVFPLAEYRTKHE-IHHTGERRYQCLACGKSF   88 (133)
T ss_dssp             EEEEEETTEEEEEETTTCCEESCHHHHHHHHHHHHC--CSCEECSSSSCEESSHHHHHHHH-HHHHTCCCEEESSSCCEE
T ss_pred             hceeecCCCcCeECCCCCCCcCCHHHHHHHHHHcCC--CCCeeCCccCeecccccchhhhc-cccCCCccccCCCCCCCc
Confidence            355689999999999999999999999999999998  59999999999999999999998 679999999999999999


Q ss_pred             cchhhHHhhhcCCCCCCCCCChHHHhhhhhhhhcCCCcccCCcchhccCCh
Q psy8169          87 SQRNNLKRQANGSNVNNRFSSNAELNKHSSAIHQRLKLHECDLCGKNFSQR  137 (843)
Q Consensus        87 ~~~~~l~~H~~~~~~~~~~~~~~~l~~h~~~~h~~~~~~~C~~C~~~f~~~  137 (843)
                      .....|..|++.+.              ........++|+|..|++.|...
T Consensus        89 ~~~~~L~~H~~~hh--------------~~~p~~~~k~~~C~~C~k~~~~~  125 (133)
T 2lt7_A           89 INYQFMSSHIKSVH--------------SQDPSGDSKLYRLHPCRSLQIRQ  125 (133)
T ss_dssp             SSHHHHHHHHHHHT--------------CCCTTSSSCCEEECCCCSSCCCC
T ss_pred             CCHHHHHHHhHHhc--------------CCCCCCCCCCeecCCCCchhhhc
Confidence            99999988873111              10111224567888888777654

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.84  E-value=6.4e-21  Score=163.95  Aligned_cols=114  Identities=25%  Similarity=0.522  Sum_probs=85.2

Q ss_pred             CCCCccccccchhhcCCHHHHHHHHhhccCCCCCcccccccccccCCHHHHHHhHHh--hccCCCceeCCCCCCcccchh
Q psy8169          13 EYVENHMCELCYKVFESRENLMRHLKIHDDKESKRFKCEQCDKRFSSNAELNKHSSA--IHQRLKLHECDLCGKNFSQRN   90 (843)
Q Consensus        13 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~C~~C~~~f~~~~~l~~H~~~--~h~~~~~~~C~~C~~~f~~~~   90 (843)
                      .+.++|.|++|++.|.+...|..|+++|.+  .++|.|+.|++.|.+...|..|+..  .|.+.++|.|++|++.|....
T Consensus         3 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~--~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~C~~C~~~f~~~~   80 (124)
T 2dlq_A            3 SGSSGVECPTCHKKFLSKYYLKVHNRKHTG--EKPFECPKCGKCYFRKENLLEHEARNCMNRSEQVFTCSVCQETFRRRM   80 (124)
T ss_dssp             CCCSSCCCTTTCCCCSSHHHHHHHHHHHSS--CCSCBCTTTCCBCSSHHHHHHHHHHCCCCSCCCCEECSSSCCEESSHH
T ss_pred             CCCCCCCCCCCCCcCCCHHHHHHHHHhCCC--CCCeECCCCCchhcCHHHHHHHHhhhhcCCCCCCeECCCCCCccCCHH
Confidence            467888888888888888888888888887  4788888888888888888888754  245666777777777777766


Q ss_pred             hHHhhhcCCCCCCCCCChHHHhhhhhhhhcCCCcccCCcchhccCChhHHHHhHhhhc
Q psy8169          91 NLKRQANGSNVNNRFSSNAELNKHSSAIHQRLKLHECDLCGKNFSQRNNLKRHLEEVH  148 (843)
Q Consensus        91 ~l~~H~~~~~~~~~~~~~~~l~~h~~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h  148 (843)
                      .|.+|+                    ++|.+.++|.|..|++.|.+...|..|++..|
T Consensus        81 ~l~~H~--------------------~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H  118 (124)
T 2dlq_A           81 ELRLHM--------------------VSHTGEMPYKCSSCSQQFMQKKDLQSHMIKLH  118 (124)
T ss_dssp             HHHHHH--------------------HHHSSSCSEECSSSCCEESSHHHHHHHHHHTS
T ss_pred             HHHHHH--------------------HHcCCCCCccCCCccchhCCHHHHHHHHHHHC
Confidence            665554                    45666666777777777777777777766445

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.82  E-value=7.9e-21  Score=163.38  Aligned_cols=115  Identities=30%  Similarity=0.561  Sum_probs=103.0

Q ss_pred             CCCCcccccccccccchHHHHHHHHHhhccCCCCCCCCCCCCCCCcchhhhccCCcccccCccccCcccccCCCcccccC
Q psy8169         561 IKSRIPCELCYKTFTRKDSLRKHMKIFHTRRNPSANSGNSGTSAPPAVKLEQNGGEKVENSTSVENSTSVENSTSVENSA  640 (843)
Q Consensus       561 ~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  640 (843)
                      +.++|.|..|++.|.+...|..|+++++.                          ++                       
T Consensus         4 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~--------------------------~~-----------------------   34 (124)
T 2dlq_A            4 GSSGVECPTCHKKFLSKYYLKVHNRKHTG--------------------------EK-----------------------   34 (124)
T ss_dssp             CCSSCCCTTTCCCCSSHHHHHHHHHHHSS--------------------------CC-----------------------
T ss_pred             CCCCCCCCCCCCcCCCHHHHHHHHHhCCC--------------------------CC-----------------------
Confidence            47899999999999999999999998443                          11                       


Q ss_pred             CcCCCccccCCCCCCCCCCCCCCCCccccccccchhhhhhhhhcc--ccCCCCCCccchhhcccccccccccccccccch
Q psy8169         641 NVENTSSVDNRTSVGPVAPIDRIPCTLCDKTFTRKDSLKKHIRIF--HTQNQPQHTNVIEVALGARANAAFIDRIRCELC  718 (843)
Q Consensus       641 ~~~~~~~~~~~~~~~p~~~~~~~~C~~C~~~f~~~~~L~~H~~~~--H~~~~p~~~~~~~~~~~~~~~~~~~~~~~C~~C  718 (843)
                                     |      |.|++|++.|.+...|..|++.+  |.+++|                     |.|++|
T Consensus        35 ---------------~------~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~---------------------~~C~~C   72 (124)
T 2dlq_A           35 ---------------P------FECPKCGKCYFRKENLLEHEARNCMNRSEQV---------------------FTCSVC   72 (124)
T ss_dssp             ---------------S------CBCTTTCCBCSSHHHHHHHHHHCCCCSCCCC---------------------EECSSS
T ss_pred             ---------------C------eECCCCCchhcCHHHHHHHHhhhhcCCCCCC---------------------eECCCC
Confidence                           3      99999999999999999999973  466666                     999999


Q ss_pred             hhhhhhHHHHhhhhhhhcCCCCCCcchhhhhcCCcceeeeeecCCCCCCCCccccchhhchhhhhhhhhhhHHHHHhHhh
Q psy8169         719 DKSFTRKDSLKKHNRIFHGGADPKVMDEQMARGSADFLEVVLNEDGEGEPVSITNEILCKICNRTFTRNYNLKKHMKTVH  798 (843)
Q Consensus       719 ~~~f~~~~~L~~H~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~C~~~F~~~~~L~~H~~~~H  798 (843)
                      ++.|.+...|..|++.|++ ++|                                 |.|++|++.|.+...|..|++.+|
T Consensus        73 ~~~f~~~~~l~~H~~~h~~-~~~---------------------------------~~C~~C~~~f~~~~~l~~H~~~~H  118 (124)
T 2dlq_A           73 QETFRRRMELRLHMVSHTG-EMP---------------------------------YKCSSCSQQFMQKKDLQSHMIKLH  118 (124)
T ss_dssp             CCEESSHHHHHHHHHHHSS-SCS---------------------------------EECSSSCCEESSHHHHHHHHHHTS
T ss_pred             CCccCCHHHHHHHHHHcCC-CCC---------------------------------ccCCCccchhCCHHHHHHHHHHHC
Confidence            9999999999999999776 777                                 999999999999999999999999


Q ss_pred             cc
Q psy8169         799 KI  800 (843)
Q Consensus       799 ~~  800 (843)
                      ..
T Consensus       119 ~~  120 (124)
T 2dlq_A          119 SG  120 (124)
T ss_dssp             SC
T ss_pred             CC
Confidence            75

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A*

Probab=99.81  E-value=5.3e-20  Score=156.75  Aligned_cols=110  Identities=29%  Similarity=0.633  Sum_probs=77.3

Q ss_pred             CCCCcccccc--chhhcCCHHHHHHHHhhccCCCCCccccc--ccccccCCHHHHHHhHHhhccCCCceeCCCCCCcccc
Q psy8169          13 EYVENHMCEL--CYKVFESRENLMRHLKIHDDKESKRFKCE--QCDKRFSSNAELNKHSSAIHQRLKLHECDLCGKNFSQ   88 (843)
Q Consensus        13 ~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~~~C~--~C~~~f~~~~~l~~H~~~~h~~~~~~~C~~C~~~f~~   88 (843)
                      +++++|.|++  |+++|.+...|..|+++|.+  .++|.|+  .|++.|.+...|..|+ ..|.+.++|.|+.|++.|..
T Consensus         2 ~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~--~~~~~C~~~~C~~~f~~~~~l~~H~-~~h~~~~~~~C~~C~~~f~~   78 (119)
T 2jp9_A            2 SEKRPFMCAYPGCNKRYFKLSHLQMHSRKHTG--EKPYQCDFKDCERRFSRSDQLKRHQ-RRHTGVKPFQCKTCQRKFSR   78 (119)
T ss_dssp             CSSCCBCCCSTTSCCCBSCHHHHHHHHHHHHT--TCCEECCSTTCCCEESSHHHHHHHH-HHHHCCCCEECTTTCCEESC
T ss_pred             CCCeeeeCCCCCCcchhCCHHHHHHHHHhhCC--CCCccCCCCCCcCccCCHHHHHHHH-HHcCCCCCccCCccCchhCC
Confidence            4667788876  88888888888888887776  4778887  6888888888888887 45666777777777777776


Q ss_pred             hhhHHhhhcCCCCCCCCCChHHHhhhhhhhhcCCCcccC--CcchhccCChhHHHHhHh
Q psy8169          89 RNNLKRQANGSNVNNRFSSNAELNKHSSAIHQRLKLHEC--DLCGKNFSQRNNLKRHLE  145 (843)
Q Consensus        89 ~~~l~~H~~~~~~~~~~~~~~~l~~h~~~~h~~~~~~~C--~~C~~~f~~~~~l~~H~~  145 (843)
                      ...|.+|+                    ++|.+.++|.|  +.|++.|.+...|..|++
T Consensus        79 ~~~l~~H~--------------------~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~  117 (119)
T 2jp9_A           79 SDHLKTHT--------------------RTHTGEKPFSCRWPSCQKKFARSDELVRHHN  117 (119)
T ss_dssp             HHHHHHHH--------------------HHHHTCCCEECCSTTCCCEESSHHHHHHHHH
T ss_pred             HHHHHHHH--------------------HHhcCCCCeeCCCCCCccccCCHHHHHHHHh
Confidence            66665554                    44555666666  566666666666666655

>2lt7_A Transcriptional regulator kaiso; zinc finger, double helix, metal binding protein-DNA complex; HET: DNA; NMR {Homo sapiens} PDB: 4f6m_A* 4f6n_A*

Probab=99.80  E-value=1e-20  Score=161.33  Aligned_cols=111  Identities=22%  Similarity=0.446  Sum_probs=99.3

Q ss_pred             hhhhhhcCCCcccCCcchhccCChhHHHHhHhhhcCCCCcccccccccccccCHHHHHHHHhhcCCCc-ccccchhHhhc
Q psy8169         114 HSSAIHQRLKLHECDLCGKNFSQRNNLKRHLEEVHRTDGMKFECYVCSKVLATSHSLKRHLLIHNGPK-YTCEICAKEFT  192 (843)
Q Consensus       114 h~~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~-~~C~~C~~~f~  192 (843)
                      |...+|.|+++|.|.+|++.|.+...|..|++ .| .++++|.|++|++.|.+...|..|+++|.+++ |.|++|++.|.
T Consensus        12 h~~~~h~Gek~y~C~~C~k~F~~~~~L~~H~~-~H-~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F~   89 (133)
T 2lt7_A           12 HYELIVDGRVYYICIVCKRSYVCLTSLRRHFN-IH-SWEKKYPCRYCEKVFPLAEYRTKHEIHHTGERRYQCLACGKSFI   89 (133)
T ss_dssp             EEEEEETTEEEEEETTTCCEESCHHHHHHHHH-HH-HCCSCEECSSSSCEESSHHHHHHHHHHHHTCCCEEESSSCCEES
T ss_pred             hceeecCCCcCeECCCCCCCcCCHHHHHHHHH-Hc-CCCCCeeCCccCeecccccchhhhccccCCCccccCCCCCCCcC
Confidence            33478899999999999999999999999998 56 78899999999999999999999999998865 99999999999


Q ss_pred             CHHHHHHHHhhccCcc---ccCccccCcccccccchh
Q psy8169         193 RVYELNIHKKLHEDES---VANQLKCEFCGKVFLKKS  226 (843)
Q Consensus       193 ~~~~L~~H~~~h~~~~---~~~~~~C~~C~~~f~~~~  226 (843)
                      +...|..|+++|+++.   ..++|+|..|++.|....
T Consensus        90 ~~~~L~~H~~~hh~~~p~~~~k~~~C~~C~k~~~~~~  126 (133)
T 2lt7_A           90 NYQFMSSHIKSVHSQDPSGDSKLYRLHPCRSLQIRQY  126 (133)
T ss_dssp             SHHHHHHHHHHHTCCCTTSSSCCEEECCCCSSCCCCC
T ss_pred             CHHHHHHHhHHhcCCCCCCCCCCeecCCCCchhhhcc
Confidence            9999999999998752   235799999999887654

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A*

Probab=99.78  E-value=2e-19  Score=153.19  Aligned_cols=110  Identities=35%  Similarity=0.660  Sum_probs=92.1

Q ss_pred             CCcccccc--cccccCCHHHHHHhHHhhccCCCceeCC--CCCCcccchhhHHhhhcCCCCCCCCCChHHHhhhhhhhhc
Q psy8169          45 SKRFKCEQ--CDKRFSSNAELNKHSSAIHQRLKLHECD--LCGKNFSQRNNLKRQANGSNVNNRFSSNAELNKHSSAIHQ  120 (843)
Q Consensus        45 ~~~~~C~~--C~~~f~~~~~l~~H~~~~h~~~~~~~C~--~C~~~f~~~~~l~~H~~~~~~~~~~~~~~~l~~h~~~~h~  120 (843)
                      +++|.|++  |++.|.+...|..|+ ..|.+.++|.|+  .|++.|.....|..|+                    ..|.
T Consensus         4 ~~~~~C~~~~C~~~f~~~~~l~~H~-~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~--------------------~~h~   62 (119)
T 2jp9_A            4 KRPFMCAYPGCNKRYFKLSHLQMHS-RKHTGEKPYQCDFKDCERRFSRSDQLKRHQ--------------------RRHT   62 (119)
T ss_dssp             SCCBCCCSTTSCCCBSCHHHHHHHH-HHHHTTCCEECCSTTCCCEESSHHHHHHHH--------------------HHHH
T ss_pred             CeeeeCCCCCCcchhCCHHHHHHHH-HhhCCCCCccCCCCCCcCccCCHHHHHHHH--------------------HHcC
Confidence            58899987  999999999999998 568888899998  6999998888886665                    5677


Q ss_pred             CCCcccCCcchhccCChhHHHHhHhhhcCCCCccccc--ccccccccCHHHHHHHHhhc
Q psy8169         121 RLKLHECDLCGKNFSQRNNLKRHLEEVHRTDGMKFEC--YVCSKVLATSHSLKRHLLIH  177 (843)
Q Consensus       121 ~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~C--~~C~~~f~~~~~l~~H~~~h  177 (843)
                      +.++|.|..|++.|.+...|..|++ .| .++++|.|  +.|++.|.+...|..|+++|
T Consensus        63 ~~~~~~C~~C~~~f~~~~~l~~H~~-~h-~~~~~~~C~~~~C~~~f~~~~~L~~H~~~H  119 (119)
T 2jp9_A           63 GVKPFQCKTCQRKFSRSDHLKTHTR-TH-TGEKPFSCRWPSCQKKFARSDELVRHHNMH  119 (119)
T ss_dssp             CCCCEECTTTCCEESCHHHHHHHHH-HH-HTCCCEECCSTTCCCEESSHHHHHHHHHTC
T ss_pred             CCCCccCCccCchhCCHHHHHHHHH-Hh-cCCCCeeCCCCCCccccCCHHHHHHHHhcC
Confidence            7888888888888888888888887 45 56778888  78888888888888888876

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens}

Probab=99.78  E-value=2.2e-19  Score=160.92  Aligned_cols=122  Identities=25%  Similarity=0.474  Sum_probs=77.6

Q ss_pred             cCCCCccccccchhhcCCHHHHHHHHhh-ccCCCCCc--------ccccccccccCCHHHHHHhHHhhccCCCceeCCC-
Q psy8169          12 HEYVENHMCELCYKVFESRENLMRHLKI-HDDKESKR--------FKCEQCDKRFSSNAELNKHSSAIHQRLKLHECDL-   81 (843)
Q Consensus        12 h~~~~~~~C~~C~~~f~~~~~l~~H~~~-h~~~~~~~--------~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~C~~-   81 (843)
                      +.....|.|.+|+++|.+...|..|+++ |.++  .+        |.|+.|++.|.+...|..|+ ..|.+.++|.|++ 
T Consensus        20 ~~~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~--~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~-~~h~~~~~~~C~~~   96 (155)
T 2rpc_A           20 DEAQLSRPKKSCDRTFSTMHELVTHVTMEHVGG--PEQNNHVCYWEECPREGKSFKAKYKLVNHI-RVHTGEKPFPCPFP   96 (155)
T ss_dssp             CTTCCSSSCCCCCCCBSSHHHHHHHHHTTTSCC--TTCSSCCCCBTTCTTSSCCCSSHHHHHHHT-HHHHCCCSEECSCT
T ss_pred             chhhcccccccCCcccCCHHHHHHHHHhhcCCC--cccCCccccccCCCCcccccCCHHHHHHHH-HhcCCCCcccCCcC
Confidence            4455667777777777777777777776 5442  22        66777777777777777776 4566666666666 


Q ss_pred             -CCCcccchhhHHhhhcCCCCCCCCCChHHHhhhhhhhhcCCCcccCCc--chhccCChhHHHHhHhhhcCCCCcccccc
Q psy8169          82 -CGKNFSQRNNLKRQANGSNVNNRFSSNAELNKHSSAIHQRLKLHECDL--CGKNFSQRNNLKRHLEEVHRTDGMKFECY  158 (843)
Q Consensus        82 -C~~~f~~~~~l~~H~~~~~~~~~~~~~~~l~~h~~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~~h~~~~~~~~C~  158 (843)
                       |++.|.....|.+|+                    ++|.+.++|.|.+  |++.|.+...|..|++ .| .++++|.|.
T Consensus        97 ~C~~~f~~~~~L~~H~--------------------~~h~~~~~~~C~~~~C~k~f~~~~~L~~H~~-~H-~~~k~~~c~  154 (155)
T 2rpc_A           97 GCGKIFARSENLKIHK--------------------RTHTGEKPFKCEFEGCDRRFANSSDRKKHMH-VH-TSDKSGPSS  154 (155)
T ss_dssp             TTCCEESCHHHHHHHH--------------------TTTCSSCSBCCSSTTCCCCBSSHHHHHHSST-TT-TSCCCSCSC
T ss_pred             CCCCccCCHHHHHHHH--------------------HhhCCCCCccCCCCCCCCccCCHHHHHHHHH-Hh-cCCCCCCCC
Confidence             666666666665554                    4455556666665  6666666666666665 34 455566553

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A*

Probab=99.78  E-value=1.9e-19  Score=154.34  Aligned_cols=107  Identities=32%  Similarity=0.634  Sum_probs=76.9

Q ss_pred             CCccccc--cchhhcCCHHHHHHHHhhccCCCCCcccccccccccCCHHHHHHhHHhhccCCCceeCCC--CCCcccchh
Q psy8169          15 VENHMCE--LCYKVFESRENLMRHLKIHDDKESKRFKCEQCDKRFSSNAELNKHSSAIHQRLKLHECDL--CGKNFSQRN   90 (843)
Q Consensus        15 ~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~C~~--C~~~f~~~~   90 (843)
                      .++|.|+  .|+++|.+...|..|+++| +  .++|.|+.|++.|.+...|..|+ ..|.+.++|.|++  |++.|....
T Consensus         3 ~~~~~C~~~~C~~~f~~~~~l~~H~~~h-~--~~~~~C~~C~~~f~~~~~l~~H~-~~h~~~~~~~C~~~~C~~~f~~~~   78 (124)
T 1ubd_C            3 PRTIACPHKGCTKMFRDNSAMRKHLHTH-G--PRVHVCAECGKAFVESSKLKRHQ-LVHTGEKPFQCTFEGCGKRFSLDF   78 (124)
T ss_dssp             --CEECCSTTCCCEESSHHHHHHHHGGG-S--CCCEECTTTCCEESSHHHHHHHG-GGTSCCCCEECCSTTCCCEESCHH
T ss_pred             CCcccCCCCCCcCccCCHHHHHHHHHHc-C--CCCeECCCCCchhCCHHHHHHHH-HHcCCCCCeeCCCCCCcCccCCHH
Confidence            5677887  7888888888888888877 3  47788888888888888888886 5677777777765  777777777


Q ss_pred             hHHhhhcCCCCCCCCCChHHHhhhhhhhhcCCCcccCC--cchhccCChhHHHHhHh
Q psy8169          91 NLKRQANGSNVNNRFSSNAELNKHSSAIHQRLKLHECD--LCGKNFSQRNNLKRHLE  145 (843)
Q Consensus        91 ~l~~H~~~~~~~~~~~~~~~l~~h~~~~h~~~~~~~C~--~C~~~f~~~~~l~~H~~  145 (843)
                      .|.+|+                    ++|.+.++|.|+  .|++.|.+...|..|++
T Consensus        79 ~l~~H~--------------------~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~  115 (124)
T 1ubd_C           79 NLRTHV--------------------RIHTGDRPYVCPFDGCNKKFAQSTNLKSHIL  115 (124)
T ss_dssp             HHHHHH--------------------HHHHCCCCCCCCSTTCCCCCSSTTTTHHHHH
T ss_pred             HHHHHH--------------------HHhCCCCceECCCCCCCCccCCHHHHHHHHH
Confidence            775554                    456666677774  37777777777777766

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens}

Probab=99.78  E-value=2.8e-19  Score=160.28  Aligned_cols=127  Identities=28%  Similarity=0.491  Sum_probs=83.0

Q ss_pred             CCcccccccccccCCHHHHHHhHHhhccCCCceeCCCCCCcccchhhHHhhhcCCCCCCCCCChHHHhhhhhhhhcCCCc
Q psy8169          45 SKRFKCEQCDKRFSSNAELNKHSSAIHQRLKLHECDLCGKNFSQRNNLKRQANGSNVNNRFSSNAELNKHSSAIHQRLKL  124 (843)
Q Consensus        45 ~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~~l~~h~~~~h~~~~~  124 (843)
                      ..+|.|..|++.|.+...|..|++..|.+.++.....                                        ...
T Consensus        23 ~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~~~~----------------------------------------~~~   62 (155)
T 2rpc_A           23 QLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHV----------------------------------------CYW   62 (155)
T ss_dssp             CCSSSCCCCCCCBSSHHHHHHHHHTTTSCCTTCSSCC----------------------------------------CCB
T ss_pred             hcccccccCCcccCCHHHHHHHHHhhcCCCcccCCcc----------------------------------------ccc
Confidence            5778888888888888888888865576654421111                                        123


Q ss_pred             ccCCcchhccCChhHHHHhHhhhcCCCCccccccc--ccccccCHHHHHHHHhhcCCCc-ccccc--hhHhhcCHHHHHH
Q psy8169         125 HECDLCGKNFSQRNNLKRHLEEVHRTDGMKFECYV--CSKVLATSHSLKRHLLIHNGPK-YTCEI--CAKEFTRVYELNI  199 (843)
Q Consensus       125 ~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~-~~C~~--C~~~f~~~~~L~~  199 (843)
                      |.|..|++.|.+...|..|++ .| .+.++|.|.+  |++.|.+...|..|+++|.+.+ |.|.+  |++.|.+...|..
T Consensus        63 ~~C~~C~~~f~~~~~l~~H~~-~h-~~~~~~~C~~~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~~~C~k~f~~~~~L~~  140 (155)
T 2rpc_A           63 EECPREGKSFKAKYKLVNHIR-VH-TGEKPFPCPFPGCGKIFARSENLKIHKRTHTGEKPFKCEFEGCDRRFANSSDRKK  140 (155)
T ss_dssp             TTCTTSSCCCSSHHHHHHHTH-HH-HCCCSEECSCTTTCCEESCHHHHHHHHTTTCSSCSBCCSSTTCCCCBSSHHHHHH
T ss_pred             cCCCCcccccCCHHHHHHHHH-hc-CCCCcccCCcCCCCCccCCHHHHHHHHHhhCCCCCccCCCCCCCCccCCHHHHHH
Confidence            556666666666666666666 33 4555666666  6666666666666666666543 66665  7766766667777


Q ss_pred             HHhhccCccccCccccC
Q psy8169         200 HKKLHEDESVANQLKCE  216 (843)
Q Consensus       200 H~~~h~~~~~~~~~~C~  216 (843)
                      |+++|+++   ++|.|.
T Consensus       141 H~~~H~~~---k~~~c~  154 (155)
T 2rpc_A          141 HMHVHTSD---KSGPSS  154 (155)
T ss_dssp             SSTTTTSC---CCSCSC
T ss_pred             HHHHhcCC---CCCCCC
Confidence            76666665   666664

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A*

Probab=99.77  E-value=4.4e-19  Score=152.13  Aligned_cols=113  Identities=36%  Similarity=0.711  Sum_probs=89.4

Q ss_pred             CCccccc--ccccccCCHHHHHHhHHhhccCCCceeCCCCCCcccchhhHHhhhcCCCCCCCCCChHHHhhhhhhhhcCC
Q psy8169          45 SKRFKCE--QCDKRFSSNAELNKHSSAIHQRLKLHECDLCGKNFSQRNNLKRQANGSNVNNRFSSNAELNKHSSAIHQRL  122 (843)
Q Consensus        45 ~~~~~C~--~C~~~f~~~~~l~~H~~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~~l~~h~~~~h~~~  122 (843)
                      .++|.|+  .|++.|.+...|..|+ ..| +.++|.|+.|++.|.....|.+|+                    .+|.+.
T Consensus         3 ~~~~~C~~~~C~~~f~~~~~l~~H~-~~h-~~~~~~C~~C~~~f~~~~~l~~H~--------------------~~h~~~   60 (124)
T 1ubd_C            3 PRTIACPHKGCTKMFRDNSAMRKHL-HTH-GPRVHVCAECGKAFVESSKLKRHQ--------------------LVHTGE   60 (124)
T ss_dssp             --CEECCSTTCCCEESSHHHHHHHH-GGG-SCCCEECTTTCCEESSHHHHHHHG--------------------GGTSCC
T ss_pred             CCcccCCCCCCcCccCCHHHHHHHH-HHc-CCCCeECCCCCchhCCHHHHHHHH--------------------HHcCCC
Confidence            4789998  8999999999999998 567 778899999999998888886665                    567777


Q ss_pred             CcccCCc--chhccCChhHHHHhHhhhcCCCCcccccc--cccccccCHHHHHHHHhhcCCCc
Q psy8169         123 KLHECDL--CGKNFSQRNNLKRHLEEVHRTDGMKFECY--VCSKVLATSHSLKRHLLIHNGPK  181 (843)
Q Consensus       123 ~~~~C~~--C~~~f~~~~~l~~H~~~~h~~~~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~  181 (843)
                      ++|.|..  |++.|.+...|..|++ .| .++++|.|+  .|++.|.+...|..|+++|++.+
T Consensus        61 ~~~~C~~~~C~~~f~~~~~l~~H~~-~h-~~~~~~~C~~~~C~~~f~~~~~L~~H~~~H~~~k  121 (124)
T 1ubd_C           61 KPFQCTFEGCGKRFSLDFNLRTHVR-IH-TGDRPYVCPFDGCNKKFAQSTNLKSHILTHAKAK  121 (124)
T ss_dssp             CCEECCSTTCCCEESCHHHHHHHHH-HH-HCCCCCCCCSTTCCCCCSSTTTTHHHHHHHC---
T ss_pred             CCeeCCCCCCcCccCCHHHHHHHHH-Hh-CCCCceECCCCCCCCccCCHHHHHHHHHHHcccc
Confidence            8888875  8888888888888887 45 566788885  48888888888888888887653

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.65  E-value=5.6e-17  Score=134.28  Aligned_cols=96  Identities=20%  Similarity=0.289  Sum_probs=86.9

Q ss_pred             HHhhcCCCCccccccchhhcCCHHHHHHHHhhccCCCCCcccccccccccCCHHHHHHhHHhhccCCCceeCCCCCCccc
Q psy8169           8 HIKSHEYVENHMCELCYKVFESRENLMRHLKIHDDKESKRFKCEQCDKRFSSNAELNKHSSAIHQRLKLHECDLCGKNFS   87 (843)
Q Consensus         8 h~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~C~~C~~~f~   87 (843)
                      ++++|+++++|.|++|++.|.+...|..|+++|.    ++|.|++|++.|.+...|..|+ + |.++++|.|++|++.|.
T Consensus         7 ~~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~H~----~~~~C~~C~~~f~~~~~l~~H~-~-H~~~~~~~C~~C~~~f~   80 (107)
T 1wjp_A            7 GASPVENKEVYQCRLCNAKLSSLLEQGSHERLCR----NAAVCPYCSLRFFSPELKQEHE-S-KCEYKKLTCLECMRTFK   80 (107)
T ss_dssp             CCCCCCCCCCCBCTTTCCBCSSHHHHHHHHHHHH----HSBCCTTTCCCBSSHHHHHHHH-H-HCSTGGGEEGGGTEECS
T ss_pred             cCcccCCCcCeECCCCCCccCCHHHHHHHHHHCC----CCccCCCCCCccCCHHHHHHHH-H-cCCCCCccCccccchhC
Confidence            5678999999999999999999999999999994    7999999999999999999998 5 99999999999999999


Q ss_pred             chhhHHhhhcCCCCCCCCCChHHHhhhhhhhhcCCCcccCC
Q psy8169          88 QRNNLKRQANGSNVNNRFSSNAELNKHSSAIHQRLKLHECD  128 (843)
Q Consensus        88 ~~~~l~~H~~~~~~~~~~~~~~~l~~h~~~~h~~~~~~~C~  128 (843)
                      ...+|.+|++                   .+|.++++|.|.
T Consensus        81 ~~~~L~~H~~-------------------~~H~~~~~~~~~  102 (107)
T 1wjp_A           81 SSFSIWRHQV-------------------EVHNQNNMAPTS  102 (107)
T ss_dssp             SHHHHHHHHH-------------------HTSCCCCCCCCC
T ss_pred             CHHHHHHHHH-------------------HHcCCCCCCCCC
Confidence            9999977662                   477788888764

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1

Probab=99.65  E-value=1.5e-16  Score=131.71  Aligned_cols=86  Identities=29%  Similarity=0.649  Sum_probs=79.0

Q ss_pred             CCCCCCCccccccccchhhhhhhhhccccCCCCCCccchhhcccccccccccccccccchhhhhhhHHHHhhhhhhhcCC
Q psy8169         659 PIDRIPCTLCDKTFTRKDSLKKHIRIFHTQNQPQHTNVIEVALGARANAAFIDRIRCELCDKSFTRKDSLKKHNRIFHGG  738 (843)
Q Consensus       659 ~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~p~~~~~~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~  738 (843)
                      ...+|.|++|++.|.+...|..|++. |.+++|                     |.|++|++.|.+...|..|++.|++ 
T Consensus        14 ~~~~~~C~~C~~~f~~~~~l~~H~~~-h~~~~~---------------------~~C~~C~~~f~~~~~l~~H~~~h~~-   70 (106)
T 2ee8_A           14 TKKEFICKFCGRHFTKSYNLLIHERT-HTDERP---------------------YTCDICHKAFRRQDHLRDHRYIHSK-   70 (106)
T ss_dssp             CCCCCBCSSSCCBCSSHHHHHHHHHH-HCCSCC---------------------CBCSSSCCBCSCHHHHHHHGGGSCC-
T ss_pred             CCcCeECCCCCCccCCHHHHHHHHHH-cCCCCC---------------------cCCCCccchhCCHHHHHHHHHHhCC-
Confidence            33459999999999999999999998 888888                     9999999999999999999998665 


Q ss_pred             CCCCcchhhhhcCCcceeeeeecCCCCCCCCccccchhhchhhhhhhhhhhHHHHHhHhhcc
Q psy8169         739 ADPKVMDEQMARGSADFLEVVLNEDGEGEPVSITNEILCKICNRTFTRNYNLKKHMKTVHKI  800 (843)
Q Consensus       739 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~C~~~F~~~~~L~~H~~~~H~~  800 (843)
                      +++                                 |.|.+|++.|.+...|..|+++|++.
T Consensus        71 ~~~---------------------------------~~C~~C~~~f~~~~~L~~H~~~H~~~   99 (106)
T 2ee8_A           71 EKP---------------------------------FKCQECGKGFCQSRTLAVHKTLHMQT   99 (106)
T ss_dssp             CCT---------------------------------TSCSSSCCCCSSHHHHHHHHHHTTSC
T ss_pred             CCC---------------------------------eECCCcCCcccCHHHHHHHHHHhCCC
Confidence            666                                 99999999999999999999999875

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.64  E-value=4e-16  Score=126.41  Aligned_cols=86  Identities=28%  Similarity=0.565  Sum_probs=79.5

Q ss_pred             hcCCCCccccccchhhcCCHHHHHHHHhhccCCCCCcccccccccccCCHHHHHHhHHhhccCCCceeCCCCCCcccchh
Q psy8169          11 SHEYVENHMCELCYKVFESRENLMRHLKIHDDKESKRFKCEQCDKRFSSNAELNKHSSAIHQRLKLHECDLCGKNFSQRN   90 (843)
Q Consensus        11 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~C~~C~~~f~~~~   90 (843)
                      ++.+.++|.|++|++.|.+...|..|+++|.+  .++|.|+.|++.|.+...|..|+ ..|.++++|.|++|++.|....
T Consensus         2 s~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~--~~~~~C~~C~~~f~~~~~l~~H~-~~h~~~~~~~C~~C~~~f~~~~   78 (96)
T 2dmd_A            2 SSGSSGPHKCEVCGKCFSRKDKLKTHMRCHTG--VKPYKCKTCDYAAADSSSLNKHL-RIHSDERPFKCQICPYASRNSS   78 (96)
T ss_dssp             CCCCCCCCCBTTTTBCCCCHHHHHHHGGGCCC--CCSEECSSSCCEESSHHHHHHHH-HHSCCCCCEECSSSSCEESSHH
T ss_pred             CCCCCcCeECCCCCCccCCHHHHHHHHHhcCC--CCCEeCCCCCCccCCHHHHHHHH-HHhCCCCCccCCCCCCccCCHH
Confidence            35688999999999999999999999999997  58999999999999999999998 6799999999999999999999


Q ss_pred             hHHhhhcCC
Q psy8169          91 NLKRQANGS   99 (843)
Q Consensus        91 ~l~~H~~~~   99 (843)
                      .|.+|++.+
T Consensus        79 ~l~~H~~~h   87 (96)
T 2dmd_A           79 QLTVHLRSH   87 (96)
T ss_dssp             HHHHHHTTC
T ss_pred             HHHHHHHHh
Confidence            998888543

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.64  E-value=9.9e-17  Score=130.03  Aligned_cols=83  Identities=35%  Similarity=0.665  Sum_probs=77.5

Q ss_pred             CCCCccccccccchhhhhhhhhccccCCCCCCccchhhcccccccccccccccccchhhhhhhHHHHhhhhhhhcCCCCC
Q psy8169         662 RIPCTLCDKTFTRKDSLKKHIRIFHTQNQPQHTNVIEVALGARANAAFIDRIRCELCDKSFTRKDSLKKHNRIFHGGADP  741 (843)
Q Consensus       662 ~~~C~~C~~~f~~~~~L~~H~~~~H~~~~p~~~~~~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~  741 (843)
                      +|.|++|++.|.+...|..|++. |.+++|                     |.|++|++.|.+...|..|++.|++ +++
T Consensus         8 ~~~C~~C~~~f~~~~~l~~H~~~-h~~~~~---------------------~~C~~C~~~f~~~~~l~~H~~~h~~-~~~   64 (96)
T 2dmd_A            8 PHKCEVCGKCFSRKDKLKTHMRC-HTGVKP---------------------YKCKTCDYAAADSSSLNKHLRIHSD-ERP   64 (96)
T ss_dssp             CCCBTTTTBCCCCHHHHHHHGGG-CCCCCS---------------------EECSSSCCEESSHHHHHHHHHHSCC-CCC
T ss_pred             CeECCCCCCccCCHHHHHHHHHh-cCCCCC---------------------EeCCCCCCccCCHHHHHHHHHHhCC-CCC
Confidence            39999999999999999999998 888888                     9999999999999999999998665 666


Q ss_pred             CcchhhhhcCCcceeeeeecCCCCCCCCccccchhhchhhhhhhhhhhHHHHHhHhhcc
Q psy8169         742 KVMDEQMARGSADFLEVVLNEDGEGEPVSITNEILCKICNRTFTRNYNLKKHMKTVHKI  800 (843)
Q Consensus       742 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~C~~~F~~~~~L~~H~~~~H~~  800 (843)
                                                       |.|.+|++.|...+.|..|++++++.
T Consensus        65 ---------------------------------~~C~~C~~~f~~~~~l~~H~~~h~~~   90 (96)
T 2dmd_A           65 ---------------------------------FKCQICPYASRNSSQLTVHLRSHTGD   90 (96)
T ss_dssp             ---------------------------------EECSSSSCEESSHHHHHHHHTTCCSC
T ss_pred             ---------------------------------ccCCCCCCccCCHHHHHHHHHHhcCC
Confidence                                             99999999999999999999999875

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus}

Probab=99.64  E-value=3.4e-17  Score=128.39  Aligned_cols=81  Identities=33%  Similarity=0.794  Sum_probs=75.9

Q ss_pred             CCCccccccccchhhhhhhhhccccCCCCCCccchhhcccccccccccccccccchhhhhhhHHHHhhhhhhhcCCCCCC
Q psy8169         663 IPCTLCDKTFTRKDSLKKHIRIFHTQNQPQHTNVIEVALGARANAAFIDRIRCELCDKSFTRKDSLKKHNRIFHGGADPK  742 (843)
Q Consensus       663 ~~C~~C~~~f~~~~~L~~H~~~~H~~~~p~~~~~~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~  742 (843)
                      |.|++|++.|.+...|..|++. |.+++|                     |.|++|++.|.+...|..|++.|++ +++ 
T Consensus         2 ~~C~~C~~~f~~~~~l~~H~~~-h~~~~~---------------------~~C~~C~~~f~~~~~l~~H~~~h~~-~~~-   57 (82)
T 2kmk_A            2 FDCKICGKSFKRSSTLSTHLLI-HSDTRP---------------------YPCQYCGKRFHQKSDMKKHTFIHTG-EKP-   57 (82)
T ss_dssp             EECSSSCCEESSHHHHHHHHHH-HHTCCC---------------------EECSSSCCEESSHHHHHHHHHHHHT-CCC-
T ss_pred             ccCCCCcccccCchhHHHHHHH-cCCCCC---------------------eeCCcCChhhCCHHHHHHHHHHhcC-CCC-
Confidence            8999999999999999999998 888888                     9999999999999999999999776 666 


Q ss_pred             cchhhhhcCCcceeeeeecCCCCCCCCccccchhhchhhhhhhhhhhHHHHHhHhhc
Q psy8169         743 VMDEQMARGSADFLEVVLNEDGEGEPVSITNEILCKICNRTFTRNYNLKKHMKTVHK  799 (843)
Q Consensus       743 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~C~~~F~~~~~L~~H~~~~H~  799 (843)
                                                      |.|++||+.|.+.+.|..|+++|++
T Consensus        58 --------------------------------~~C~~C~~~f~~~~~l~~H~~~H~g   82 (82)
T 2kmk_A           58 --------------------------------HKCQVCGKAFSQSSNLITHSRKHTG   82 (82)
T ss_dssp             --------------------------------EECTTTSCEESSHHHHHHHHHHHC-
T ss_pred             --------------------------------CcCCCcchhhCChHHHHHHHHhhCC
Confidence                                            9999999999999999999999874

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1

Probab=99.64  E-value=3.8e-16  Score=129.25  Aligned_cols=82  Identities=29%  Similarity=0.647  Sum_probs=76.6

Q ss_pred             cCCCCccccccchhhcCCHHHHHHHHhhccCCCCCcccccccccccCCHHHHHHhHHhhccCCCceeCCCCCCcccchhh
Q psy8169          12 HEYVENHMCELCYKVFESRENLMRHLKIHDDKESKRFKCEQCDKRFSSNAELNKHSSAIHQRLKLHECDLCGKNFSQRNN   91 (843)
Q Consensus        12 h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~C~~C~~~f~~~~~   91 (843)
                      ..+.++|.|++|++.|.+...|..|+++|.+  .++|.|++|++.|.+...|..|+ ..|.++++|.|++|++.|.....
T Consensus        12 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~--~~~~~C~~C~~~f~~~~~l~~H~-~~h~~~~~~~C~~C~~~f~~~~~   88 (106)
T 2ee8_A           12 SKTKKEFICKFCGRHFTKSYNLLIHERTHTD--ERPYTCDICHKAFRRQDHLRDHR-YIHSKEKPFKCQECGKGFCQSRT   88 (106)
T ss_dssp             CCCCCCCBCSSSCCBCSSHHHHHHHHHHHCC--SCCCBCSSSCCBCSCHHHHHHHG-GGSCCCCTTSCSSSCCCCSSHHH
T ss_pred             cCCCcCeECCCCCCccCCHHHHHHHHHHcCC--CCCcCCCCccchhCCHHHHHHHH-HHhCCCCCeECCCcCCcccCHHH
Confidence            4567899999999999999999999999998  58999999999999999999997 77999999999999999999999


Q ss_pred             HHhhh
Q psy8169          92 LKRQA   96 (843)
Q Consensus        92 l~~H~   96 (843)
                      |.+|+
T Consensus        89 L~~H~   93 (106)
T 2ee8_A           89 LAVHK   93 (106)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            97776

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.63  E-value=1.2e-16  Score=129.34  Aligned_cols=84  Identities=32%  Similarity=0.708  Sum_probs=77.2

Q ss_pred             CCCCccccccccchhhhhhhhhccccCCCCCCccchhhcccccccccccccccccchhhhhhhHHHHhhhhhhhcCC-CC
Q psy8169         662 RIPCTLCDKTFTRKDSLKKHIRIFHTQNQPQHTNVIEVALGARANAAFIDRIRCELCDKSFTRKDSLKKHNRIFHGG-AD  740 (843)
Q Consensus       662 ~~~C~~C~~~f~~~~~L~~H~~~~H~~~~p~~~~~~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~-~~  740 (843)
                      +|.|++|++.|.+...|..|++. |.+++|                     |.|++|++.|.+...|..|++.|++. .+
T Consensus         7 ~~~C~~C~~~f~~~~~l~~H~~~-h~~~~~---------------------~~C~~C~~~f~~~~~l~~H~~~h~~~~~~   64 (95)
T 2yt9_A            7 GVACEICGKIFRDVYHLNRHKLS-HSGEKP---------------------YSCPVCGLRFKRKDRMSYHVRSHDGSVGK   64 (95)
T ss_dssp             CEECSSSCCEESSSHHHHHHHHH-SCSSCS---------------------EECSSSCCEESCHHHHHHHHHHHCCCCCS
T ss_pred             CeECCCCCCccCChHHHHHHHHh-cCCCCC---------------------CcCCCCCCccCCHHHHHHHHHHhcCCCCC
Confidence            39999999999999999999998 888888                     99999999999999999999998773 14


Q ss_pred             CCcchhhhhcCCcceeeeeecCCCCCCCCccccchhhchhhhhhhhhhhHHHHHhHhhcc
Q psy8169         741 PKVMDEQMARGSADFLEVVLNEDGEGEPVSITNEILCKICNRTFTRNYNLKKHMKTVHKI  800 (843)
Q Consensus       741 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~C~~~F~~~~~L~~H~~~~H~~  800 (843)
                      +                                 |.|.+|++.|.+...|..|++..|..
T Consensus        65 ~---------------------------------~~C~~C~~~f~~~~~L~~H~~~~H~~   91 (95)
T 2yt9_A           65 P---------------------------------YICQSCGKGFSRPDHLNGHIKQVHSG   91 (95)
T ss_dssp             S---------------------------------BCCSSSCCCBSSHHHHHHHHHHTSCC
T ss_pred             c---------------------------------eECCCccchhCCHHHHHHHHHHhcCC
Confidence            4                                 99999999999999999999988864

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A

Probab=99.61  E-value=7.8e-17  Score=127.72  Aligned_cols=84  Identities=33%  Similarity=0.721  Sum_probs=78.2

Q ss_pred             CCCccccccccchhhhhhhhhccccCCCCCCccchhhcccccccccccccccccchhhhhhhHHHHhhhhhhhcCCCCCC
Q psy8169         663 IPCTLCDKTFTRKDSLKKHIRIFHTQNQPQHTNVIEVALGARANAAFIDRIRCELCDKSFTRKDSLKKHNRIFHGGADPK  742 (843)
Q Consensus       663 ~~C~~C~~~f~~~~~L~~H~~~~H~~~~p~~~~~~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~  742 (843)
                      |.|++|++.|.+...|..|++. |.+++|                     |+|++|++.|.+...|..|++.+|+  .+ 
T Consensus         4 ~~C~~C~k~f~~~~~L~~H~~~-H~~~~~---------------------~~C~~C~k~f~~~~~L~~H~~~h~~--~~-   58 (88)
T 1llm_C            4 FQCRICMRNFSRSDHLTTHIRT-HTGEKP---------------------FACDICGRKFARSDERKRHRDIQHI--LP-   58 (88)
T ss_dssp             EECTTTCCEESCHHHHHHHHHH-HHCCCC---------------------EECTTTCCEESSHHHHHHHHHHHTH--HH-
T ss_pred             CcCCCCCCccCCHHHHHHHHHH-cCCCCC---------------------ccCCCCCCccCCHHHHHHHHHHhCC--Cc-
Confidence            9999999999999999999998 999988                     9999999999999999999999884  33 


Q ss_pred             cchhhhhcCCcceeeeeecCCCCCCCCccccchhhchhhhhhhhhhhHHHHHhHhhccCCC
Q psy8169         743 VMDEQMARGSADFLEVVLNEDGEGEPVSITNEILCKICNRTFTRNYNLKKHMKTVHKIDDN  803 (843)
Q Consensus       743 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~C~~~F~~~~~L~~H~~~~H~~~~~  803 (843)
                                                      |.|+.|++.|.....|..|++.+|+...+
T Consensus        59 --------------------------------~~c~~C~~~f~~~~~L~~H~~~~h~~~~~   87 (88)
T 1llm_C           59 --------------------------------ILEDKVEELLSKNYHLENEVARLKKLVGE   87 (88)
T ss_dssp             --------------------------------HHHHHHHHHHHHHHHHHHHHHHHHHHTCC
T ss_pred             --------------------------------chHHHHHHHHHHHhhhHHHHHHHHHHhcC
Confidence                                            99999999999999999999999986543

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C

Probab=99.60  E-value=8.7e-16  Score=122.72  Aligned_cols=81  Identities=31%  Similarity=0.676  Sum_probs=74.4

Q ss_pred             CCCccccc--cchhhcCCHHHHHHHHhhccCCCCCcccccccccccCCHHHHHHhHHhhccCCCceeCCCCCCcccchhh
Q psy8169          14 YVENHMCE--LCYKVFESRENLMRHLKIHDDKESKRFKCEQCDKRFSSNAELNKHSSAIHQRLKLHECDLCGKNFSQRNN   91 (843)
Q Consensus        14 ~~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~C~~C~~~f~~~~~   91 (843)
                      |+++|.|+  .|++.|.+...|..|+++|.+  .++|.|+.|++.|.+...|..|+ ..|.+.++|.|+.|++.|.....
T Consensus         1 ~~k~~~C~~~~C~~~f~~~~~l~~H~~~h~~--~~~~~C~~C~~~f~~~~~l~~H~-~~h~~~~~~~C~~C~~~f~~~~~   77 (90)
T 1a1h_A            1 MERPYACPVESCDRRFSQSGSLTRHIRIHTG--QKPFQCRICMRNFSRSDHLTTHI-RTHTGEKPFACDICGRKFARSDE   77 (90)
T ss_dssp             --CCEECCSSSCCCEESSHHHHHHHHHHHHC--CCCEECTTTCCEESCHHHHHHHH-HHHHCCCCEECTTTCCEESSHHH
T ss_pred             CCCceECCCCCCCCccCCHHHHHHHHHHhCC--CCCccCCCCCcccCCHHHHHHHH-HHcCCCCCccCCCCCchhCCHHH
Confidence            46899998  699999999999999999998  58999999999999999999998 67889999999999999999999


Q ss_pred             HHhhhc
Q psy8169          92 LKRQAN   97 (843)
Q Consensus        92 l~~H~~   97 (843)
                      |.+|++
T Consensus        78 l~~H~~   83 (90)
T 1a1h_A           78 RKRHTK   83 (90)
T ss_dssp             HHHHHG
T ss_pred             HHHHHH
Confidence            988874

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.60  E-value=1.5e-16  Score=133.88  Aligned_cols=94  Identities=20%  Similarity=0.374  Sum_probs=53.6

Q ss_pred             HHHHHHhhccCCCCCcccccccccccCCHHHHHHhHHhh--ccCCCce-eCCCCCCcc--cchhhHHhhhcCCCCCCCCC
Q psy8169          32 NLMRHLKIHDDKESKRFKCEQCDKRFSSNAELNKHSSAI--HQRLKLH-ECDLCGKNF--SQRNNLKRQANGSNVNNRFS  106 (843)
Q Consensus        32 ~l~~H~~~h~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~--h~~~~~~-~C~~C~~~f--~~~~~l~~H~~~~~~~~~~~  106 (843)
                      .|..|+++|.+  ++||.|+.|++.|.+...|..|++ .  |.+.+++ .|+.|++.|  .....|.+|+          
T Consensus         6 ~l~~H~~~H~~--~~~~~C~~C~k~f~~~~~L~~H~~-~~~h~~~~~~~~C~~C~~~f~f~~~~~l~~H~----------   72 (115)
T 2dmi_A            6 SGKLYGSIFTG--ASKFRCKDCSAAYDTLVELTVHMN-ETGHYRDDNHETDNNNPKRWSKPRKRSLLEME----------   72 (115)
T ss_dssp             CCCCCCCCCCC--CCSEEBSSSSCEESSHHHHHHHHH-HTCCCBCSCCCCCCCCCSCCSSCCCCCCCCCC----------
T ss_pred             hhhhheeeeCC--CCCEECCccCchhcCHHHHHHHHH-HhCccccCCCccCCCCCcccccccHHHHHHHh----------
Confidence            34556666655  356666666666666666666652 3  3333333 366666665  5555554443          


Q ss_pred             ChHHHhhhhhhhhcCCCcccCCcchhccCChhHHHHhHhhhc
Q psy8169         107 SNAELNKHSSAIHQRLKLHECDLCGKNFSQRNNLKRHLEEVH  148 (843)
Q Consensus       107 ~~~~l~~h~~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~h  148 (843)
                                ++|.++++|.|..|++.|.....|..|++.+|
T Consensus        73 ----------~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~hh  104 (115)
T 2dmi_A           73 ----------GKEDAQKVLKCMYCGHSFESLQDLSVHMIKTK  104 (115)
T ss_dssp             ----------CSCCCCSSCBCSSSCCBCSSHHHHHHHHHHTT
T ss_pred             ----------hccCCCcceECCCCCCccCCHHHHHHHHHHhC
Confidence                      44555666666666666666666666666444

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.59  E-value=1.1e-16  Score=134.77  Aligned_cols=91  Identities=15%  Similarity=0.212  Sum_probs=82.4

Q ss_pred             HHHHHHhhcCCCCccccccchhhcCCHHHHHHHHhh--ccCCCCCc-cccccccccc--CCHHHHHHhHHhhccCCCcee
Q psy8169           4 IISEHIKSHEYVENHMCELCYKVFESRENLMRHLKI--HDDKESKR-FKCEQCDKRF--SSNAELNKHSSAIHQRLKLHE   78 (843)
Q Consensus         4 ~l~~h~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~--h~~~~~~~-~~C~~C~~~f--~~~~~l~~H~~~~h~~~~~~~   78 (843)
                      .|..|+++|+++++|.|++|++.|.+...|..|+++  |.+  .++ +.|+.|++.|  .+...|..|+ ..|.+++||.
T Consensus         6 ~l~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~~~h~~--~~~~~~C~~C~~~f~f~~~~~l~~H~-~~H~~~~~~~   82 (115)
T 2dmi_A            6 SGKLYGSIFTGASKFRCKDCSAAYDTLVELTVHMNETGHYR--DDNHETDNNNPKRWSKPRKRSLLEME-GKEDAQKVLK   82 (115)
T ss_dssp             CCCCCCCCCCCCCSEEBSSSSCEESSHHHHHHHHHHTCCCB--CSCCCCCCCCCSCCSSCCCCCCCCCC-CSCCCCSSCB
T ss_pred             hhhhheeeeCCCCCEECCccCchhcCHHHHHHHHHHhCccc--cCCCccCCCCCcccccccHHHHHHHh-hccCCCcceE
Confidence            466799999999999999999999999999999998  665  344 4599999999  8999999998 7799999999


Q ss_pred             CCCCCCcccchhhHHhhhc
Q psy8169          79 CDLCGKNFSQRNNLKRQAN   97 (843)
Q Consensus        79 C~~C~~~f~~~~~l~~H~~   97 (843)
                      |++|++.|....+|.+|++
T Consensus        83 C~~C~k~f~~~~~L~~H~~  101 (115)
T 2dmi_A           83 CMYCGHSFESLQDLSVHMI  101 (115)
T ss_dssp             CSSSCCBCSSHHHHHHHHH
T ss_pred             CCCCCCccCCHHHHHHHHH
Confidence            9999999999999988874

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C

Probab=99.59  E-value=2.3e-16  Score=126.12  Aligned_cols=82  Identities=39%  Similarity=0.846  Sum_probs=76.2

Q ss_pred             CCCc--cccccccchhhhhhhhhccccCCCCCCccchhhcccccccccccccccccchhhhhhhHHHHhhhhhhhcCCCC
Q psy8169         663 IPCT--LCDKTFTRKDSLKKHIRIFHTQNQPQHTNVIEVALGARANAAFIDRIRCELCDKSFTRKDSLKKHNRIFHGGAD  740 (843)
Q Consensus       663 ~~C~--~C~~~f~~~~~L~~H~~~~H~~~~p~~~~~~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~  740 (843)
                      |.|+  .|++.|.+...|..|++. |.+++|                     |.|++|++.|.+...|..|++.|++ ++
T Consensus         5 ~~C~~~~C~~~f~~~~~l~~H~~~-h~~~~~---------------------~~C~~C~~~f~~~~~l~~H~~~h~~-~~   61 (90)
T 1a1h_A            5 YACPVESCDRRFSQSGSLTRHIRI-HTGQKP---------------------FQCRICMRNFSRSDHLTTHIRTHTG-EK   61 (90)
T ss_dssp             EECCSSSCCCEESSHHHHHHHHHH-HHCCCC---------------------EECTTTCCEESCHHHHHHHHHHHHC-CC
T ss_pred             eECCCCCCCCccCCHHHHHHHHHH-hCCCCC---------------------ccCCCCCcccCCHHHHHHHHHHcCC-CC
Confidence            9998  599999999999999998 888888                     9999999999999999999998776 66


Q ss_pred             CCcchhhhhcCCcceeeeeecCCCCCCCCccccchhhchhhhhhhhhhhHHHHHhHhhcc
Q psy8169         741 PKVMDEQMARGSADFLEVVLNEDGEGEPVSITNEILCKICNRTFTRNYNLKKHMKTVHKI  800 (843)
Q Consensus       741 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~C~~~F~~~~~L~~H~~~~H~~  800 (843)
                      +                                 |.|.+||+.|.+.+.|..|+++|++.
T Consensus        62 ~---------------------------------~~C~~C~~~f~~~~~l~~H~~~H~~~   88 (90)
T 1a1h_A           62 P---------------------------------FACDICGRKFARSDERKRHTKIHLRQ   88 (90)
T ss_dssp             C---------------------------------EECTTTCCEESSHHHHHHHHGGGGC-
T ss_pred             C---------------------------------ccCCCCCchhCCHHHHHHHHHHhccc
Confidence            6                                 99999999999999999999998874

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus}

Probab=99.59  E-value=1e-15  Score=119.91  Aligned_cols=78  Identities=38%  Similarity=0.810  Sum_probs=73.6

Q ss_pred             ccccccchhhcCCHHHHHHHHhhccCCCCCcccccccccccCCHHHHHHhHHhhccCCCceeCCCCCCcccchhhHHhhh
Q psy8169          17 NHMCELCYKVFESRENLMRHLKIHDDKESKRFKCEQCDKRFSSNAELNKHSSAIHQRLKLHECDLCGKNFSQRNNLKRQA   96 (843)
Q Consensus        17 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~C~~C~~~f~~~~~l~~H~   96 (843)
                      +|.|++|++.|.+...|..|+++|.+  .++|.|+.|++.|.+...|..|+ ..|.++++|.|+.|++.|....+|.+|+
T Consensus         1 ~~~C~~C~~~f~~~~~l~~H~~~h~~--~~~~~C~~C~~~f~~~~~l~~H~-~~h~~~~~~~C~~C~~~f~~~~~l~~H~   77 (82)
T 2kmk_A            1 SFDCKICGKSFKRSSTLSTHLLIHSD--TRPYPCQYCGKRFHQKSDMKKHT-FIHTGEKPHKCQVCGKAFSQSSNLITHS   77 (82)
T ss_dssp             CEECSSSCCEESSHHHHHHHHHHHHT--CCCEECSSSCCEESSHHHHHHHH-HHHHTCCCEECTTTSCEESSHHHHHHHH
T ss_pred             CccCCCCcccccCchhHHHHHHHcCC--CCCeeCCcCChhhCCHHHHHHHH-HHhcCCCCCcCCCcchhhCChHHHHHHH
Confidence            68999999999999999999999987  58999999999999999999998 6788999999999999999999998887


Q ss_pred             c
Q psy8169          97 N   97 (843)
Q Consensus        97 ~   97 (843)
                      +
T Consensus        78 ~   78 (82)
T 2kmk_A           78 R   78 (82)
T ss_dssp             H
T ss_pred             H
Confidence            3

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.58  E-value=1.2e-15  Score=127.06  Aligned_cols=84  Identities=27%  Similarity=0.546  Sum_probs=79.1

Q ss_pred             hhcCCCCccccccchhhcCCHHHHHHHHhhccCCCCCcccccccccccCCHHHHHHhHHhhccCCCceeCCCCCCcccch
Q psy8169          10 KSHEYVENHMCELCYKVFESRENLMRHLKIHDDKESKRFKCEQCDKRFSSNAELNKHSSAIHQRLKLHECDLCGKNFSQR   89 (843)
Q Consensus        10 ~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~C~~C~~~f~~~   89 (843)
                      ..|+++++|.| .|++.|.+...|..|++.|.+  .++|.|++|++.|.+...|..|+ ..|.++++|.|++|++.|...
T Consensus         3 ~~h~~~k~~~C-~C~~~f~~~~~l~~H~~~h~~--~~~~~C~~C~~~f~~~~~l~~H~-~~h~~~~~~~C~~C~~~f~~~   78 (110)
T 2csh_A            3 SGSSGDKLYPC-QCGKSFTHKSQRDRHMSMHLG--LRPYGCGVCGKKFKMKHHLVGHM-KIHTGIKPYECNICAKRFMWR   78 (110)
T ss_dssp             CCCCCCCCEEC-TTSCEESSHHHHHHHHHHHSC--CCSEECTTTSCEESSSHHHHHHH-TTTCCCCCEECSSSCCEESCH
T ss_pred             CCCCCCCCEec-cCCCccCCHHHHHHHHHHcCC--CcCccCCCCCcccCCHHHHHHHH-HHcCCCCCeeCCCCcchhcCH
Confidence            36899999999 999999999999999999998  58999999999999999999998 779999999999999999999


Q ss_pred             hhHHhhhc
Q psy8169          90 NNLKRQAN   97 (843)
Q Consensus        90 ~~l~~H~~   97 (843)
                      ..|.+|++
T Consensus        79 ~~l~~H~~   86 (110)
T 2csh_A           79 DSFHRHVT   86 (110)
T ss_dssp             HHHHHHHH
T ss_pred             HHHHHHHH
Confidence            99998884

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.58  E-value=1.4e-15  Score=125.87  Aligned_cols=89  Identities=18%  Similarity=0.338  Sum_probs=80.1

Q ss_pred             ccCCCCCcccccccccccchHHHHHHHHHhhccCCCCCCCCCCCCCCCcchhhhccCCcccccCccccCcccccCCCccc
Q psy8169         558 GHEIKSRIPCELCYKTFTRKDSLRKHMKIFHTRRNPSANSGNSGTSAPPAVKLEQNGGEKVENSTSVENSTSVENSTSVE  637 (843)
Q Consensus       558 ~~~~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  637 (843)
                      .|.++++|.|.+|++.|.+...|..|+++|..                                                
T Consensus        10 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~~H~~------------------------------------------------   41 (107)
T 1wjp_A           10 PVENKEVYQCRLCNAKLSSLLEQGSHERLCRN------------------------------------------------   41 (107)
T ss_dssp             CCCCCCCCBCTTTCCBCSSHHHHHHHHHHHHH------------------------------------------------
T ss_pred             ccCCCcCeECCCCCCccCCHHHHHHHHHHCCC------------------------------------------------
Confidence            35668999999999999999999999998422                                                


Q ss_pred             ccCCcCCCccccCCCCCCCCCCCCCCCCccccccccchhhhhhhhhccccCCCCCCccchhhcccccccccccccccccc
Q psy8169         638 NSANVENTSSVDNRTSVGPVAPIDRIPCTLCDKTFTRKDSLKKHIRIFHTQNQPQHTNVIEVALGARANAAFIDRIRCEL  717 (843)
Q Consensus       638 ~~~~~~~~~~~~~~~~~~p~~~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~p~~~~~~~~~~~~~~~~~~~~~~~C~~  717 (843)
                                        |      |.|++|++.|.+...|..|+ . |.+++|                     |+|++
T Consensus        42 ------------------~------~~C~~C~~~f~~~~~l~~H~-~-H~~~~~---------------------~~C~~   74 (107)
T 1wjp_A           42 ------------------A------AVCPYCSLRFFSPELKQEHE-S-KCEYKK---------------------LTCLE   74 (107)
T ss_dssp             ------------------S------BCCTTTCCCBSSHHHHHHHH-H-HCSTGG---------------------GEEGG
T ss_pred             ------------------C------ccCCCCCCccCCHHHHHHHH-H-cCCCCC---------------------ccCcc
Confidence                              3      99999999999999999999 4 999988                     99999


Q ss_pred             hhhhhhhHHHHhhhhhhhcCCCCC
Q psy8169         718 CDKSFTRKDSLKKHNRIFHGGADP  741 (843)
Q Consensus       718 C~~~f~~~~~L~~H~~~~H~~~~~  741 (843)
                      |++.|.+...|..|++..|.++++
T Consensus        75 C~~~f~~~~~L~~H~~~~H~~~~~   98 (107)
T 1wjp_A           75 CMRTFKSSFSIWRHQVEVHNQNNM   98 (107)
T ss_dssp             GTEECSSHHHHHHHHHHTSCCCCC
T ss_pred             ccchhCCHHHHHHHHHHHcCCCCC
Confidence            999999999999999866776776

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.57  E-value=2e-15  Score=121.93  Aligned_cols=82  Identities=29%  Similarity=0.552  Sum_probs=75.8

Q ss_pred             CCCCccccccchhhcCCHHHHHHHHhhccCCCCCcccccccccccCCHHHHHHhHHhhccCC--CceeCCCCCCcccchh
Q psy8169          13 EYVENHMCELCYKVFESRENLMRHLKIHDDKESKRFKCEQCDKRFSSNAELNKHSSAIHQRL--KLHECDLCGKNFSQRN   90 (843)
Q Consensus        13 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~--~~~~C~~C~~~f~~~~   90 (843)
                      .++++|.|++|++.|.+...|..|+++|.+  .++|.|+.|++.|.+...|..|+ ..|.+.  ++|.|+.|++.|....
T Consensus         3 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~--~~~~~C~~C~~~f~~~~~l~~H~-~~h~~~~~~~~~C~~C~~~f~~~~   79 (95)
T 2yt9_A            3 SGSSGVACEICGKIFRDVYHLNRHKLSHSG--EKPYSCPVCGLRFKRKDRMSYHV-RSHDGSVGKPYICQSCGKGFSRPD   79 (95)
T ss_dssp             CCCSCEECSSSCCEESSSHHHHHHHHHSCS--SCSEECSSSCCEESCHHHHHHHH-HHHCCCCCSSBCCSSSCCCBSSHH
T ss_pred             CCCCCeECCCCCCccCChHHHHHHHHhcCC--CCCCcCCCCCCccCCHHHHHHHH-HHhcCCCCCceECCCccchhCCHH
Confidence            578999999999999999999999999987  58999999999999999999998 557665  8999999999999999


Q ss_pred             hHHhhhc
Q psy8169          91 NLKRQAN   97 (843)
Q Consensus        91 ~l~~H~~   97 (843)
                      .|.+|++
T Consensus        80 ~L~~H~~   86 (95)
T 2yt9_A           80 HLNGHIK   86 (95)
T ss_dssp             HHHHHHH
T ss_pred             HHHHHHH
Confidence            9988874

>4gzn_C ZFP-57, zinc finger protein 57; transcription-DNA complex; HET: DNA 5CM; 0.99A {Mus musculus}

Probab=99.57  E-value=1.3e-15  Score=107.48  Aligned_cols=58  Identities=28%  Similarity=0.583  Sum_probs=52.0

Q ss_pred             CCccccccchhhcCCHHHHHHHHhhccCCCCCcccccccccccCCHHHHHHhHHhhccCCC
Q psy8169          15 VENHMCELCYKVFESRENLMRHLKIHDDKESKRFKCEQCDKRFSSNAELNKHSSAIHQRLK   75 (843)
Q Consensus        15 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~   75 (843)
                      ++||.|++|+++|.+...|..|+++|++  ++||.|++|+++|.....|..|+ ++|++++
T Consensus         2 EKpy~C~~C~k~F~~~~~L~~H~~~Ht~--ekp~~C~~C~k~F~~~~~L~~H~-~~Htgep   59 (60)
T 4gzn_C            2 ERPFFCNFCGKTYRDASGLSRHRRAHLG--YRPRSCPECGKCFRDQSEVNRHL-KVHQNKP   59 (60)
T ss_dssp             CCCEECTTTCCEESSHHHHHHHHHHHHT--CCCEECTTTCCEESSHHHHHHHG-GGGSCC-
T ss_pred             CCCccCCCCCCEeCCHHHHHHHHHHhCC--CcCeECCCCCCCcCCHHHHHHHh-CccCCCC
Confidence            6899999999999999999999999998  58999999999999999999997 6788764

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.56  E-value=7.7e-16  Score=128.32  Aligned_cols=82  Identities=32%  Similarity=0.697  Sum_probs=76.7

Q ss_pred             CCCCccccccccchhhhhhhhhccccCCCCCCccchhhcccccccccccccccccchhhhhhhHHHHhhhhhhhcCCCCC
Q psy8169         662 RIPCTLCDKTFTRKDSLKKHIRIFHTQNQPQHTNVIEVALGARANAAFIDRIRCELCDKSFTRKDSLKKHNRIFHGGADP  741 (843)
Q Consensus       662 ~~~C~~C~~~f~~~~~L~~H~~~~H~~~~p~~~~~~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~  741 (843)
                      +|.| .|++.|.+...|..|++. |.+++|                     |+|++|++.|.+...|..|++.|++ +++
T Consensus        10 ~~~C-~C~~~f~~~~~l~~H~~~-h~~~~~---------------------~~C~~C~~~f~~~~~l~~H~~~h~~-~~~   65 (110)
T 2csh_A           10 LYPC-QCGKSFTHKSQRDRHMSM-HLGLRP---------------------YGCGVCGKKFKMKHHLVGHMKIHTG-IKP   65 (110)
T ss_dssp             CEEC-TTSCEESSHHHHHHHHHH-HSCCCS---------------------EECTTTSCEESSSHHHHHHHTTTCC-CCC
T ss_pred             CEec-cCCCccCCHHHHHHHHHH-cCCCcC---------------------ccCCCCCcccCCHHHHHHHHHHcCC-CCC
Confidence            4999 999999999999999998 888888                     9999999999999999999998766 666


Q ss_pred             CcchhhhhcCCcceeeeeecCCCCCCCCccccchhhchhhhhhhhhhhHHHHHhHhhcc
Q psy8169         742 KVMDEQMARGSADFLEVVLNEDGEGEPVSITNEILCKICNRTFTRNYNLKKHMKTVHKI  800 (843)
Q Consensus       742 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~C~~~F~~~~~L~~H~~~~H~~  800 (843)
                                                       |.|.+|++.|.+...|..|++.+|..
T Consensus        66 ---------------------------------~~C~~C~~~f~~~~~l~~H~~~~~~~   91 (110)
T 2csh_A           66 ---------------------------------YECNICAKRFMWRDSFHRHVTSCTKS   91 (110)
T ss_dssp             ---------------------------------EECSSSCCEESCHHHHHHHHHHHHHH
T ss_pred             ---------------------------------eeCCCCcchhcCHHHHHHHHHHcccc
Confidence                                             99999999999999999999999974

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens}

Probab=99.55  E-value=2.3e-15  Score=123.04  Aligned_cols=85  Identities=39%  Similarity=0.762  Sum_probs=76.8

Q ss_pred             CCCCCCCcc--ccccccchhhhhhhhhccccCCCCCCccchhhccccccccccccccccc--chhhhhhhHHHHhhhhhh
Q psy8169         659 PIDRIPCTL--CDKTFTRKDSLKKHIRIFHTQNQPQHTNVIEVALGARANAAFIDRIRCE--LCDKSFTRKDSLKKHNRI  734 (843)
Q Consensus       659 ~~~~~~C~~--C~~~f~~~~~L~~H~~~~H~~~~p~~~~~~~~~~~~~~~~~~~~~~~C~--~C~~~f~~~~~L~~H~~~  734 (843)
                      ....|.|++  |++.|.+...|..|++. |.+++|                     |.|.  .|++.|.+...|..|++.
T Consensus        12 ~~~~~~C~~~~C~~~f~~~~~l~~H~~~-h~~~~~---------------------~~C~~~~C~~~f~~~~~l~~H~~~   69 (100)
T 2ebt_A           12 KRRIHYCDYPGCTKVYTKSSHLKAHLRT-HTGEKP---------------------YKCTWEGCDWRFARSDELTRHYRK   69 (100)
T ss_dssp             SCCCEECCSSSCCCEESCHHHHHHHHHH-HSCCCC---------------------EECCSSSCCCEESSHHHHHHHHHH
T ss_pred             cCcceEcCCCCCCCcccCHHHHHHHHHH-hCCCCC---------------------eeCCCCCCCCccCCHHHHHHHHHH
Confidence            334599997  99999999999999998 888888                     9996  599999999999999999


Q ss_pred             hcCCCCCCcchhhhhcCCcceeeeeecCCCCCCCCccccchhhchhhhhhhhhhhHHHHHhHhhc
Q psy8169         735 FHGGADPKVMDEQMARGSADFLEVVLNEDGEGEPVSITNEILCKICNRTFTRNYNLKKHMKTVHK  799 (843)
Q Consensus       735 ~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~C~~~F~~~~~L~~H~~~~H~  799 (843)
                      |++ +++                                 |.|.+|++.|.....|..||++|++
T Consensus        70 h~~-~~~---------------------------------~~C~~C~~~f~~~~~l~~H~~~H~~  100 (100)
T 2ebt_A           70 HTG-AKP---------------------------------FQCGVCNRSFSRSDHLALHMKRHQN  100 (100)
T ss_dssp             HTS-CCS---------------------------------CBCSSSCCBCSSHHHHHHHHHHHCC
T ss_pred             hCC-CCC---------------------------------eECCCCcCccCCHHHHHHHHHHhCC
Confidence            776 676                                 9999999999999999999998864

>4gzn_C ZFP-57, zinc finger protein 57; transcription-DNA complex; HET: DNA 5CM; 0.99A {Mus musculus}

Probab=99.52  E-value=5.8e-15  Score=104.24  Aligned_cols=58  Identities=22%  Similarity=0.453  Sum_probs=54.5

Q ss_pred             cceeecCcChhccCChHHHHHHHHHhcCCCceeccccchhcCChhhHHHHHHHccCCC
Q psy8169         273 NVYLTCLICFKTFLTEVDLGKHMKMHMDDNQIQCRFCNKYFSRNYNLKQHMKTCTKNV  330 (843)
Q Consensus       273 ~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~  330 (843)
                      +.+|.|.+|++.|.....|..|+++|++++||.|..|+++|.+...|..|+++|+++.
T Consensus         2 EKpy~C~~C~k~F~~~~~L~~H~~~Ht~ekp~~C~~C~k~F~~~~~L~~H~~~Htgep   59 (60)
T 4gzn_C            2 ERPFFCNFCGKTYRDASGLSRHRRAHLGYRPRSCPECGKCFRDQSEVNRHLKVHQNKP   59 (60)
T ss_dssp             CCCEECTTTCCEESSHHHHHHHHHHHHTCCCEECTTTCCEESSHHHHHHHGGGGSCC-
T ss_pred             CCCccCCCCCCEeCCHHHHHHHHHHhCCCcCeECCCCCCCcCCHHHHHHHhCccCCCC
Confidence            3489999999999999999999999999999999999999999999999999998753

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A

Probab=99.52  E-value=2.2e-15  Score=119.29  Aligned_cols=83  Identities=25%  Similarity=0.459  Sum_probs=71.8

Q ss_pred             CCcccCCcchhccCChhHHHHhHhhhcCCCCcccccccccccccCHHHHHHHHhhcCCCcccccchhHhhcCHHHHHHHH
Q psy8169         122 LKLHECDLCGKNFSQRNNLKRHLEEVHRTDGMKFECYVCSKVLATSHSLKRHLLIHNGPKYTCEICAKEFTRVYELNIHK  201 (843)
Q Consensus       122 ~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~C~~C~~~f~~~~~L~~H~  201 (843)
                      +++|.|..|++.|.+...|..|++ .| .++++|.|.+|++.|.+...|..|+++|++.+|.|..|++.|.+...|..|+
T Consensus         1 ek~~~C~~C~k~f~~~~~L~~H~~-~H-~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~c~~C~~~f~~~~~L~~H~   78 (88)
T 1llm_C            1 MKPFQCRICMRNFSRSDHLTTHIR-TH-TGEKPFACDICGRKFARSDERKRHRDIQHILPILEDKVEELLSKNYHLENEV   78 (88)
T ss_dssp             CCCEECTTTCCEESCHHHHHHHHH-HH-HCCCCEECTTTCCEESSHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCCcCCCCCCccCCHHHHHHHHH-Hc-CCCCCccCCCCCCccCCHHHHHHHHHHhCCCcchHHHHHHHHHHHhhhHHHH
Confidence            367899999999999999999988 45 5778899999999999999999999998887799999999999999999998


Q ss_pred             hhccC
Q psy8169         202 KLHED  206 (843)
Q Consensus       202 ~~h~~  206 (843)
                      +.+++
T Consensus        79 ~~~h~   83 (88)
T 1llm_C           79 ARLKK   83 (88)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            87664

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A

Probab=99.51  E-value=4e-15  Score=118.52  Aligned_cols=79  Identities=39%  Similarity=0.806  Sum_probs=74.0

Q ss_pred             CCCcc--ccccccchhhhhhhhhccccCCCCCCccchhhccccccccccccccccc--chhhhhhhHHHHhhhhhhhcCC
Q psy8169         663 IPCTL--CDKTFTRKDSLKKHIRIFHTQNQPQHTNVIEVALGARANAAFIDRIRCE--LCDKSFTRKDSLKKHNRIFHGG  738 (843)
Q Consensus       663 ~~C~~--C~~~f~~~~~L~~H~~~~H~~~~p~~~~~~~~~~~~~~~~~~~~~~~C~--~C~~~f~~~~~L~~H~~~~H~~  738 (843)
                      |.|++  |++.|.+...|..|++. |.+++|                     |.|+  .|++.|.+...|..|++.|++ 
T Consensus         6 ~~C~~~~C~~~f~~~~~l~~H~~~-h~~~~~---------------------~~C~~~~C~~~f~~~~~l~~H~~~h~~-   62 (89)
T 2wbs_A            6 HTCDYAGCGKTYTKSSHLKAHLRT-HTGEKP---------------------YHCDWDGCGWKFARSDELTRHYRKHTG-   62 (89)
T ss_dssp             EECCSTTTCCEESSHHHHHHHHTT-SCSSCC---------------------EECCSTTTCCEESSHHHHHHHHHHHHC-
T ss_pred             eeCCCCCCCCcCCCHHHHHHHHHh-cCCCCC---------------------cCCCCCCCCCccCCHHHHHHHHHHcCC-
Confidence            99999  99999999999999998 888888                     9997  599999999999999998776 


Q ss_pred             CCCCcchhhhhcCCcceeeeeecCCCCCCCCccccchhhchhhhhhhhhhhHHHHHhHh
Q psy8169         739 ADPKVMDEQMARGSADFLEVVLNEDGEGEPVSITNEILCKICNRTFTRNYNLKKHMKTV  797 (843)
Q Consensus       739 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~C~~~F~~~~~L~~H~~~~  797 (843)
                      +++                                 |.|++||+.|...+.|..|+++|
T Consensus        63 ~~~---------------------------------~~C~~C~~~f~~~~~l~~H~~~H   88 (89)
T 2wbs_A           63 HRP---------------------------------FQCQKCDRAFSRSDHLALHMKRH   88 (89)
T ss_dssp             CCC---------------------------------EECSSSSCEESSHHHHHHHGGGG
T ss_pred             CCC---------------------------------ccCCCCCcccCCHHHHHHHHHhh
Confidence            676                                 99999999999999999999876

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.50  E-value=8.7e-15  Score=115.66  Aligned_cols=81  Identities=21%  Similarity=0.340  Sum_probs=74.0

Q ss_pred             HHHHHhhcCCCCccccccchhhcCCHHHHHHHHhhccCCC--CCcccccccccccCCHHHHHHhHHhhccCCCceeCCCC
Q psy8169           5 ISEHIKSHEYVENHMCELCYKVFESRENLMRHLKIHDDKE--SKRFKCEQCDKRFSSNAELNKHSSAIHQRLKLHECDLC   82 (843)
Q Consensus         5 l~~h~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~--~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~C~~C   82 (843)
                      |..|+++|+++++|.|++|++.|.+...|..|++.|+...  .++|.|+.|++.|.+...|..|+ ..|.+.+++.|..|
T Consensus         3 ~~~H~~~H~~~k~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~~C~~C~~~f~~~~~L~~H~-~~h~~~~~~~~~~~   81 (86)
T 1x6h_A            3 SGSSGRTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRNTMARHA-DNCAGPDGVEGENS   81 (86)
T ss_dssp             TTCCSTTCCCCCCEECSSSSCEESSHHHHHHHHHHTTCSSCCCCCEECSSSCCEESCHHHHHHHH-HHCCCCCSCCCCCC
T ss_pred             cccccceecCCCCCcCCCCCCccCCHHHHHHHHHHhcCCcCCCcceECCCCCChhCCHHHHHHHH-HHccCCCCcccCCC
Confidence            5679999999999999999999999999999999887642  27899999999999999999998 77889999999999


Q ss_pred             CCcc
Q psy8169          83 GKNF   86 (843)
Q Consensus        83 ~~~f   86 (843)
                      +..|
T Consensus        82 ~~~~   85 (86)
T 1x6h_A           82 GPSS   85 (86)
T ss_dssp             CCCC
T ss_pred             CCCC
Confidence            9876

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A

Probab=99.50  E-value=2.1e-14  Score=114.33  Aligned_cols=80  Identities=26%  Similarity=0.651  Sum_probs=74.7

Q ss_pred             CCcccccc--chhhcCCHHHHHHHHhhccCCCCCccccc--ccccccCCHHHHHHhHHhhccCCCceeCCCCCCcccchh
Q psy8169          15 VENHMCEL--CYKVFESRENLMRHLKIHDDKESKRFKCE--QCDKRFSSNAELNKHSSAIHQRLKLHECDLCGKNFSQRN   90 (843)
Q Consensus        15 ~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~~~C~--~C~~~f~~~~~l~~H~~~~h~~~~~~~C~~C~~~f~~~~   90 (843)
                      ..+|.|++  |++.|.+...|..|+++|.+  .++|.|+  .|++.|.+...|..|+ ..|.++++|.|+.|++.|....
T Consensus         3 ~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~--~~~~~C~~~~C~~~f~~~~~l~~H~-~~h~~~~~~~C~~C~~~f~~~~   79 (89)
T 2wbs_A            3 TATHTCDYAGCGKTYTKSSHLKAHLRTHTG--EKPYHCDWDGCGWKFARSDELTRHY-RKHTGHRPFQCQKCDRAFSRSD   79 (89)
T ss_dssp             CCCEECCSTTTCCEESSHHHHHHHHTTSCS--SCCEECCSTTTCCEESSHHHHHHHH-HHHHCCCCEECSSSSCEESSHH
T ss_pred             CCCeeCCCCCCCCcCCCHHHHHHHHHhcCC--CCCcCCCCCCCCCccCCHHHHHHHH-HHcCCCCCccCCCCCcccCCHH
Confidence            46899999  99999999999999999987  5899997  5999999999999998 6799999999999999999999


Q ss_pred             hHHhhhc
Q psy8169          91 NLKRQAN   97 (843)
Q Consensus        91 ~l~~H~~   97 (843)
                      +|..|++
T Consensus        80 ~l~~H~~   86 (89)
T 2wbs_A           80 HLALHMK   86 (89)
T ss_dssp             HHHHHGG
T ss_pred             HHHHHHH
Confidence            9988874

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A

Probab=99.47  E-value=5.8e-15  Score=116.51  Aligned_cols=77  Identities=34%  Similarity=0.598  Sum_probs=73.0

Q ss_pred             CCC--ccccccccchhhhhhhhhccccCCCCCCccchhhcccccccccccccccccc--hhhhhhhHHHHhhhhhhhcCC
Q psy8169         663 IPC--TLCDKTFTRKDSLKKHIRIFHTQNQPQHTNVIEVALGARANAAFIDRIRCEL--CDKSFTRKDSLKKHNRIFHGG  738 (843)
Q Consensus       663 ~~C--~~C~~~f~~~~~L~~H~~~~H~~~~p~~~~~~~~~~~~~~~~~~~~~~~C~~--C~~~f~~~~~L~~H~~~~H~~  738 (843)
                      |.|  +.|++.|.+...|..|++. |.+++|                     |+|++  |++.|.+...|..|++.|++ 
T Consensus         2 ~~C~~~~C~~~f~~~~~l~~H~~~-h~~~~~---------------------~~C~~~~C~~~f~~~~~l~~H~~~h~~-   58 (85)
T 2j7j_A            2 YVCHFENCGKAFKKHNQLKVHQFS-HTQQLP---------------------YECPHEGCDKRFSLPSRLKRHEKVHAG-   58 (85)
T ss_dssp             EECCSTTCCCEESSHHHHHHHHHH-HHTTCC---------------------EECCSTTCCCEESSHHHHHHHHHHHHS-
T ss_pred             ccCCCCCCCcccCCHHHHHHHHHH-hCCCCC---------------------eeCCCCCCcCccCCHHHHHHHHHHhCC-
Confidence            899  8899999999999999998 888888                     99998  99999999999999999776 


Q ss_pred             CCCCcchhhhhcCCcceeeeeecCCCCCCCCccccchhhch---hhhhhhhhhhHHHHHhHhh
Q psy8169         739 ADPKVMDEQMARGSADFLEVVLNEDGEGEPVSITNEILCKI---CNRTFTRNYNLKKHMKTVH  798 (843)
Q Consensus       739 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~---C~~~F~~~~~L~~H~~~~H  798 (843)
                                                          |.|.+   |++.|...+.|..|++++|
T Consensus        59 ------------------------------------~~C~~~~~C~~~f~~~~~l~~H~~~hh   85 (85)
T 2j7j_A           59 ------------------------------------YPCKKDDSCSFVGKTWTLYLKHVAECH   85 (85)
T ss_dssp             ------------------------------------EECCSCSSCCCEESSHHHHHHHHHHCC
T ss_pred             ------------------------------------CCCCCCCCCCCccCCHHHHHHHHHhcC
Confidence                                                77999   9999999999999999987

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens}

Probab=99.45  E-value=1e-13  Score=113.18  Aligned_cols=82  Identities=33%  Similarity=0.695  Sum_probs=75.3

Q ss_pred             CCCCcccccc--chhhcCCHHHHHHHHhhccCCCCCccccc--ccccccCCHHHHHHhHHhhccCCCceeCCCCCCcccc
Q psy8169          13 EYVENHMCEL--CYKVFESRENLMRHLKIHDDKESKRFKCE--QCDKRFSSNAELNKHSSAIHQRLKLHECDLCGKNFSQ   88 (843)
Q Consensus        13 ~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~~~C~--~C~~~f~~~~~l~~H~~~~h~~~~~~~C~~C~~~f~~   88 (843)
                      ...++|.|.+  |++.|.+...|..|+++|.+  .++|.|+  .|++.|.+...|..|+ ..|.++++|.|+.|++.|..
T Consensus        11 ~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~--~~~~~C~~~~C~~~f~~~~~l~~H~-~~h~~~~~~~C~~C~~~f~~   87 (100)
T 2ebt_A           11 EKRRIHYCDYPGCTKVYTKSSHLKAHLRTHTG--EKPYKCTWEGCDWRFARSDELTRHY-RKHTGAKPFQCGVCNRSFSR   87 (100)
T ss_dssp             CSCCCEECCSSSCCCEESCHHHHHHHHHHHSC--CCCEECCSSSCCCEESSHHHHHHHH-HHHTSCCSCBCSSSCCBCSS
T ss_pred             ccCcceEcCCCCCCCcccCHHHHHHHHHHhCC--CCCeeCCCCCCCCccCCHHHHHHHH-HHhCCCCCeECCCCcCccCC
Confidence            3567899997  99999999999999999987  5899996  6999999999999998 67999999999999999999


Q ss_pred             hhhHHhhhc
Q psy8169          89 RNNLKRQAN   97 (843)
Q Consensus        89 ~~~l~~H~~   97 (843)
                      ...|.+|++
T Consensus        88 ~~~l~~H~~   96 (100)
T 2ebt_A           88 SDHLALHMK   96 (100)
T ss_dssp             HHHHHHHHH
T ss_pred             HHHHHHHHH
Confidence            999988873

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.45  E-value=6.1e-14  Score=108.52  Aligned_cols=72  Identities=26%  Similarity=0.559  Sum_probs=66.8

Q ss_pred             CCCCcccccc--chhhcCCHHHHHHHHh-hccCCCCCcccccc--cccccCCHHHHHHhHHhhccCCCceeCCCCCCccc
Q psy8169          13 EYVENHMCEL--CYKVFESRENLMRHLK-IHDDKESKRFKCEQ--CDKRFSSNAELNKHSSAIHQRLKLHECDLCGKNFS   87 (843)
Q Consensus        13 ~~~~~~~C~~--C~~~f~~~~~l~~H~~-~h~~~~~~~~~C~~--C~~~f~~~~~l~~H~~~~h~~~~~~~C~~C~~~f~   87 (843)
                      ++.++|.|..  |+++|.+...|..|++ .|.+  .++|.|+.  |++.|.+...|..|+ ..|.++++|.|++|++.|.
T Consensus         3 ~~~~~~~C~~~~C~~~f~~~~~L~~H~~~~H~~--~~~~~C~~~~C~k~f~~~~~L~~H~-~~H~~~~~~~C~~C~k~F~   79 (79)
T 2dlk_A            3 SGSSGMPCDFPGCGRIFSNRQYLNHHKKYQHIH--QKSFSCPEPACGKSFNFKKHLKEHM-KLHSDTRDYICEFSGPSSG   79 (79)
T ss_dssp             SCCSSEECSSTTTCCEESSHHHHHHHHHHGGGS--CCCEECSCTTTCCEESSHHHHHHHH-HHHHTSCCCSCCSSSCCCC
T ss_pred             CCCCCccCCCCCCcCccCCHHHHHHHHHHHhCC--CCCeECCCCCCcCccCCHHHHHHHH-HHhCCCCCeeCCCCCCCCC
Confidence            5788999997  9999999999999999 7887  58999999  999999999999998 6799999999999999984

>2ghf_A ZHX1, zinc fingers and homeoboxes protein 1; C2H2 zinc fingers, 4-stranded parallel/anti-parallel beta- sheet, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.44  E-value=6.1e-14  Score=111.70  Aligned_cols=74  Identities=12%  Similarity=0.215  Sum_probs=64.7

Q ss_pred             hcCCCCccccccchhhcCCHHHHHHHHh-hccC-CCCCcccccccccccCCHHHHHHhHHhhccCCCceeCCCCCC
Q psy8169          11 SHEYVENHMCELCYKVFESRENLMRHLK-IHDD-KESKRFKCEQCDKRFSSNAELNKHSSAIHQRLKLHECDLCGK   84 (843)
Q Consensus        11 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~-~h~~-~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~C~~C~~   84 (843)
                      .-.|+++|.|++|++.|.++..|..|++ .|.+ ..++||.|+.|++.|.+...|..|+.++|++++||.|.++..
T Consensus        12 ~~~gekpy~C~~Cgk~F~~~~~L~~H~r~~H~~~~~ekpf~C~~Cgk~F~~~~~L~~H~~r~Htgekpy~C~~~~~   87 (102)
T 2ghf_A           12 NKKVEGGYECKYCTFQTPDLNMFTFHVDSEHPNVVLNSSYVCVECNFLTKRYDALSEHNLKYHPGEENFKLTMVKR   87 (102)
T ss_dssp             CCCCCSSEECSSCSCEESCHHHHHHHHHHHCSSCCCSCCEEETTTTEEESSTHHHHTHHHHTSTTCCCEEEEECCC
T ss_pred             cCCCCcCcCCCCCCCccCCHHHHHHHHHhhCCCCCCCCCcCCCCCCcccCCHHHHHHHHHHhcCCCCCeeCCcccC
Confidence            3468999999999999999999999998 5843 236899999999999999999999447899999999998543

>2lv2_A Insulinoma-associated protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.42  E-value=1.1e-13  Score=105.92  Aligned_cols=64  Identities=27%  Similarity=0.531  Sum_probs=56.8

Q ss_pred             hhcCCCCccccccchhhcCCHHHHHHHHhhccCCCCCcccccccccccCCHHHHHHhHHhhccCCC
Q psy8169          10 KSHEYVENHMCELCYKVFESRENLMRHLKIHDDKESKRFKCEQCDKRFSSNAELNKHSSAIHQRLK   75 (843)
Q Consensus        10 ~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~   75 (843)
                      .++...++|.|++|+++|.++..|.+|+++|++  ++||.|++|++.|.+...|..|++++|.++.
T Consensus        21 ~~~~~~~~h~C~~Cgk~F~~~~~L~~H~~~H~~--~k~~~C~~C~k~F~~~~~L~~H~~~~H~~E~   84 (85)
T 2lv2_A           21 GLSASAECHLCPVCGESFASKGAQERHLRLLHA--AQVFPCKYCPATFYSSPGLTRHINKCHPSEN   84 (85)
T ss_dssp             SSCCCCTTEECTTSCCEESSHHHHHHHHHTTSC--SSSEECTTSSCEESSHHHHHHHHHTTCTTCC
T ss_pred             CCCCCCCCEECCCCCCCcCcHHHHhhhhhhccC--CCccCCCCCCCEeCCHHHHHHhCcccCcCCC
Confidence            356677889999999999999999999999998  5899999999999999999999888888764

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A

Probab=99.41  E-value=1e-13  Score=109.31  Aligned_cols=78  Identities=32%  Similarity=0.542  Sum_probs=59.4

Q ss_pred             cccC--CcchhccCChhHHHHhHhhhcCCCCccccccc--ccccccCHHHHHHHHhhcCCCcccccc---hhHhhcCHHH
Q psy8169         124 LHEC--DLCGKNFSQRNNLKRHLEEVHRTDGMKFECYV--CSKVLATSHSLKRHLLIHNGPKYTCEI---CAKEFTRVYE  196 (843)
Q Consensus       124 ~~~C--~~C~~~f~~~~~l~~H~~~~h~~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~C~~---C~~~f~~~~~  196 (843)
                      ||.|  ..|++.|.+...|..|++ .| .++++|.|++  |++.|.+...|..|+++|.+  |.|..   |++.|.+...
T Consensus         1 p~~C~~~~C~~~f~~~~~l~~H~~-~h-~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~--~~C~~~~~C~~~f~~~~~   76 (85)
T 2j7j_A            1 MYVCHFENCGKAFKKHNQLKVHQF-SH-TQQLPYECPHEGCDKRFSLPSRLKRHEKVHAG--YPCKKDDSCSFVGKTWTL   76 (85)
T ss_dssp             CEECCSTTCCCEESSHHHHHHHHH-HH-HTTCCEECCSTTCCCEESSHHHHHHHHHHHHS--EECCSCSSCCCEESSHHH
T ss_pred             CccCCCCCCCcccCCHHHHHHHHH-Hh-CCCCCeeCCCCCCcCccCCHHHHHHHHHHhCC--CCCCCCCCCCCccCCHHH
Confidence            4777  778888888888888876 44 4567788877  88888888888888887777  77777   7777777777


Q ss_pred             HHHHHhhcc
Q psy8169         197 LNIHKKLHE  205 (843)
Q Consensus       197 L~~H~~~h~  205 (843)
                      |..|+++|+
T Consensus        77 l~~H~~~hh   85 (85)
T 2j7j_A           77 YLKHVAECH   85 (85)
T ss_dssp             HHHHHHHCC
T ss_pred             HHHHHHhcC
Confidence            777777664

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.41  E-value=1.6e-13  Score=105.20  Aligned_cols=67  Identities=24%  Similarity=0.460  Sum_probs=62.6

Q ss_pred             hhcCCCCccccccchhhcCCHHHHHHHHhhccCCCCCcccccccccccCCHHHHHHhHHhhccCCCceeC
Q psy8169          10 KSHEYVENHMCELCYKVFESRENLMRHLKIHDDKESKRFKCEQCDKRFSSNAELNKHSSAIHQRLKLHEC   79 (843)
Q Consensus        10 ~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~C   79 (843)
                      +.+.++++|.|++|++.|.+...|..|+++|.+  .++|.|++|++.|.+...|..|+ ..|.+++||+|
T Consensus        11 ~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~--~~~~~C~~C~~~f~~~~~L~~H~-~~H~~~~p~~C   77 (77)
T 2cot_A           11 WQQRERRRYKCDECGKSFSHSSDLSKHRRTHTG--EKPYKCDECGKAFIQRSHLIGHH-RVHTGSGPSSG   77 (77)
T ss_dssp             SCCCCSCSSBCSSSCCBCSCHHHHHHHHTTTCC--SCSEECSSSCCEESSHHHHHHHG-GGSCCCCCCCC
T ss_pred             CcCCCCCCEECCCCCcccCCHHHHHHHHHHcCC--CcCeeCCCCCCccCCHHHHHHHH-HHhCCCCCCCC
Confidence            456788999999999999999999999999998  58999999999999999999998 77999999987

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.41  E-value=5.5e-14  Score=107.85  Aligned_cols=71  Identities=18%  Similarity=0.370  Sum_probs=62.5

Q ss_pred             HHHHHhhcCCCCccccccchhhcCCHHHHHHHHh-hccCCCCCcccccccccccCCHHHHHHhHHhhccCCCc
Q psy8169           5 ISEHIKSHEYVENHMCELCYKVFESRENLMRHLK-IHDDKESKRFKCEQCDKRFSSNAELNKHSSAIHQRLKL   76 (843)
Q Consensus         5 l~~h~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~-~h~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~   76 (843)
                      |..|+++|+++++|.|++|++.|.+...|..|++ .|.++ .++|.|+.|++.|.+...|..|++..|....|
T Consensus         3 ~~~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~~h~~~-~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~p   74 (77)
T 2ct1_A            3 SGSSGRTHSGEKPYECYICHARFTQSGTMKMHILQKHTEN-VAKFHCPHCDTVIARKSDLGVHLRKQHSYSGP   74 (77)
T ss_dssp             CCCCCCCCSCCCSEECTTTCCEESCHHHHHHHHHHHSSSS-CSSEECSSSSCEESSHHHHHHHHHHTSCCSCC
T ss_pred             CCccccccCCCCCeECCCcCchhCCHHHHHHHHHHhcCCC-CCccCCCCCCCccCCHHHHHHHHHHhCCCCCC
Confidence            4568999999999999999999999999999997 56542 48999999999999999999999777877665

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.41  E-value=5.5e-14  Score=107.84  Aligned_cols=69  Identities=25%  Similarity=0.479  Sum_probs=62.9

Q ss_pred             hhhhhhhccccCCCCCCccchhhcccccccccccccccccchhhhhhhHHHHhhhhhhhcCCC-CCCcchhhhhcCCcce
Q psy8169         677 SLKKHIRIFHTQNQPQHTNVIEVALGARANAAFIDRIRCELCDKSFTRKDSLKKHNRIFHGGA-DPKVMDEQMARGSADF  755 (843)
Q Consensus       677 ~L~~H~~~~H~~~~p~~~~~~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~-~~~~~~~~~~~~~~~~  755 (843)
                      +|.+|+++ |.+++|                     |+|++|++.|.++..|..|++.+|.+. ++              
T Consensus         2 s~~~H~~~-H~~~k~---------------------~~C~~C~k~f~~~~~L~~H~~~~h~~~~~~--------------   45 (77)
T 2ct1_A            2 SSGSSGRT-HSGEKP---------------------YECYICHARFTQSGTMKMHILQKHTENVAK--------------   45 (77)
T ss_dssp             CCCCCCCC-CSCCCS---------------------EECTTTCCEESCHHHHHHHHHHHSSSSCSS--------------
T ss_pred             CCCccccc-cCCCCC---------------------eECCCcCchhCCHHHHHHHHHHhcCCCCCc--------------
Confidence            57889998 999999                     999999999999999999998667643 55              


Q ss_pred             eeeeecCCCCCCCCccccchhhchhhhhhhhhhhHHHHHhHhhcc
Q psy8169         756 LEVVLNEDGEGEPVSITNEILCKICNRTFTRNYNLKKHMKTVHKI  800 (843)
Q Consensus       756 ~~~~~~~~~~~~~~~~~~~~~C~~C~~~F~~~~~L~~H~~~~H~~  800 (843)
                                         |.|++|++.|.+...|..|++++|+.
T Consensus        46 -------------------~~C~~C~~~f~~~~~L~~H~~~~H~~   71 (77)
T 2ct1_A           46 -------------------FHCPHCDTVIARKSDLGVHLRKQHSY   71 (77)
T ss_dssp             -------------------EECSSSSCEESSHHHHHHHHHHTSCC
T ss_pred             -------------------cCCCCCCCccCCHHHHHHHHHHhCCC
Confidence                               99999999999999999999999986

>2ctd_A Zinc finger protein 512; zinc binding, two ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.39  E-value=2.5e-13  Score=108.13  Aligned_cols=72  Identities=22%  Similarity=0.323  Sum_probs=60.4

Q ss_pred             HHHHHHhhcCCCCccccccchhhc-CCHHHHHHHHhhccCCCCCcccccccccccCCHHHHHHhHHhhccCCCcee
Q psy8169           4 IISEHIKSHEYVENHMCELCYKVF-ESRENLMRHLKIHDDKESKRFKCEQCDKRFSSNAELNKHSSAIHQRLKLHE   78 (843)
Q Consensus         4 ~l~~h~~~h~~~~~~~C~~C~~~f-~~~~~l~~H~~~h~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~   78 (843)
                      .|..|+++|.++++|.|++|++.| .+...|..|+++| +  +++|.|.+|++.|.....|..|++.+|++...|.
T Consensus        21 ~~~~~~~~~~~~~~~~C~~C~k~F~~~~~~L~~H~~~h-~--~k~~~C~~Cgk~F~~~~~L~~H~~~~H~~~p~~~   93 (96)
T 2ctd_A           21 LEEQWYLEIVDKGSVSCPTCQAVGRKTIEGLKKHMENC-K--QEMFTCHHCGKQLRSLAGMKYHVMANHNSLPSGP   93 (96)
T ss_dssp             HHHHHHHHHHHTSCEECTTTCSCEESSHHHHHHHHHHH-C--CCCCCCSSSCCCCSSHHHHHHHHHHHTCCCSSCS
T ss_pred             HHHHHHHHhcCCCCcCCCCCCCCcccCHHHHHHHHHHH-C--CCCeECCCCCCeeCCHHHHHHHhHHhcCCCCCCC
Confidence            577888888889999999999999 8999999999999 6  5899999999999999999999437787654443

>2gqj_A Zinc finger protein KIAA1196; ZF-C2H2 like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.39  E-value=3.1e-14  Score=114.83  Aligned_cols=77  Identities=18%  Similarity=0.286  Sum_probs=68.0

Q ss_pred             cccchhhhhhhhhccccCCCCCCccchhhcccccccccccccccccchhhhhh-hHHHHhhhhhhhcCCCCCCcchhhhh
Q psy8169         671 TFTRKDSLKKHIRIFHTQNQPQHTNVIEVALGARANAAFIDRIRCELCDKSFT-RKDSLKKHNRIFHGGADPKVMDEQMA  749 (843)
Q Consensus       671 ~f~~~~~L~~H~~~~H~~~~p~~~~~~~~~~~~~~~~~~~~~~~C~~C~~~f~-~~~~L~~H~~~~H~~~~~~~~~~~~~  749 (843)
                      .+.....+..|++. |.+++|                     |+|++|++.|. ++..|..|++.|++.+++        
T Consensus         5 s~~~~~~~~~h~~~-h~~~~~---------------------~~C~~C~k~f~~~~~~L~~H~~~h~~~~~~--------   54 (98)
T 2gqj_A            5 SSGPGGPEEQWQRA-IHERGE---------------------AVCPTCNVVTRKTLVGLKKHMEVCQKLQDA--------   54 (98)
T ss_dssp             CCCCCCSCSHHHHT-TTTTSC---------------------CCCTTTCCCCSSCSHHHHHHHHHHHHHHHH--------
T ss_pred             CCCCCCcHHHHHHH-hccCCC---------------------cCCCCCCCChhhhHHHHHHHHHHHcCCCCC--------
Confidence            45566778999998 999998                     99999999999 999999999997763444        


Q ss_pred             cCCcceeeeeecCCCCCCCCccccchhhchhhhhhhhhhhHHHHHhHhhccCC
Q psy8169         750 RGSADFLEVVLNEDGEGEPVSITNEILCKICNRTFTRNYNLKKHMKTVHKIDD  802 (843)
Q Consensus       750 ~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~C~~~F~~~~~L~~H~~~~H~~~~  802 (843)
                                               |.|.+|++.|.+...|..|++++|+..+
T Consensus        55 -------------------------~~C~~C~k~F~~~~~L~~H~~~h~~~kp   82 (98)
T 2gqj_A           55 -------------------------LKCQHCRKQFKSKAGLNYHTMAEHSAKP   82 (98)
T ss_dssp             -------------------------HSCSSSCCCCSCHHHHHHHHHHHSCSCS
T ss_pred             -------------------------EECCCCCCccCCHHHHHHHHHHHcCCCC
Confidence                                     9999999999999999999999998643

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.36  E-value=2.3e-13  Score=107.36  Aligned_cols=81  Identities=26%  Similarity=0.421  Sum_probs=71.1

Q ss_pred             HHHHHHhhccCCCCCcccccccccccCCHHHHHHhHHhhccCC---CceeCCCCCCcccchhhHHhhhcCCCCCCCCCCh
Q psy8169          32 NLMRHLKIHDDKESKRFKCEQCDKRFSSNAELNKHSSAIHQRL---KLHECDLCGKNFSQRNNLKRQANGSNVNNRFSSN  108 (843)
Q Consensus        32 ~l~~H~~~h~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~---~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~  108 (843)
                      +|.+|+++|.+  ++||.|+.|++.|.+...|..|++.+|...   ++|.|+.|++.|.....|.+|+            
T Consensus         2 s~~~H~~~H~~--~k~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~~C~~C~~~f~~~~~L~~H~------------   67 (86)
T 1x6h_A            2 SSGSSGRTHTG--EKPYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRNTMARHA------------   67 (86)
T ss_dssp             TTTCCSTTCCC--CCCEECSSSSCEESSHHHHHHHHHHTTCSSCCCCCEECSSSCCEESCHHHHHHHH------------
T ss_pred             CcccccceecC--CCCCcCCCCCCccCCHHHHHHHHHHhcCCcCCCcceECCCCCChhCCHHHHHHHH------------
Confidence            35679999998  599999999999999999999996666554   7999999999999999997776            


Q ss_pred             HHHhhhhhhhhcCCCcccCCcchhcc
Q psy8169         109 AELNKHSSAIHQRLKLHECDLCGKNF  134 (843)
Q Consensus       109 ~~l~~h~~~~h~~~~~~~C~~C~~~f  134 (843)
                              ++|.+.+++.|..|+..|
T Consensus        68 --------~~h~~~~~~~~~~~~~~~   85 (86)
T 1x6h_A           68 --------DNCAGPDGVEGENSGPSS   85 (86)
T ss_dssp             --------HHCCCCCSCCCCCCCCCC
T ss_pred             --------HHccCCCCcccCCCCCCC
Confidence                    778889999999998765

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.35  E-value=7.1e-13  Score=100.64  Aligned_cols=65  Identities=26%  Similarity=0.511  Sum_probs=59.6

Q ss_pred             hhcCCCCccccccchhhcCCHHHHHHHHhhccCCCCCcccccccccccCCHHHHHHhHHhhccCCCce
Q psy8169          10 KSHEYVENHMCELCYKVFESRENLMRHLKIHDDKESKRFKCEQCDKRFSSNAELNKHSSAIHQRLKLH   77 (843)
Q Consensus        10 ~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~   77 (843)
                      -.+.++++|.|++|++.|.+...|..|+++|.+  .++|.|+.|++.|.+...|..|+ ..|.+++||
T Consensus        10 ~~~~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~--~~~~~C~~C~k~f~~~~~L~~H~-~~H~~~kp~   74 (74)
T 2lce_A           10 HMTHSDKPYKCDRCQASFRYKGNLASHKTVHTG--EKPYRCNICGAQFNRPANLKTHT-RIHSGEKPY   74 (74)
T ss_dssp             -CCCCCCSBCCTTSSCCBSCHHHHHHHHHHHCC--CCSEECTTTCCEESCHHHHHHHH-HHHCCSCCC
T ss_pred             cccCCCCCeECCCCCceeCCHHHHHHHHHHcCC--CCCEECCCCCchhCCHHHHHHHH-HhcCCCCCC
Confidence            357789999999999999999999999999998  58999999999999999999998 679888876

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.35  E-value=8.3e-13  Score=102.04  Aligned_cols=71  Identities=28%  Similarity=0.555  Sum_probs=64.5

Q ss_pred             CCcccccc--cccccCCHHHHHHhHHhhccCCCceeCCC--CCCcccchhhHHhhhcCCCCCCCCCChHHHhhhhhhhhc
Q psy8169          45 SKRFKCEQ--CDKRFSSNAELNKHSSAIHQRLKLHECDL--CGKNFSQRNNLKRQANGSNVNNRFSSNAELNKHSSAIHQ  120 (843)
Q Consensus        45 ~~~~~C~~--C~~~f~~~~~l~~H~~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~~~~~~~~~~~~~l~~h~~~~h~  120 (843)
                      +++|.|..  |++.|.+...|..|++..|.+.++|.|+.  |++.|..+.+|.+|+                    ++|.
T Consensus         5 ~~~~~C~~~~C~~~f~~~~~L~~H~~~~H~~~~~~~C~~~~C~k~f~~~~~L~~H~--------------------~~H~   64 (79)
T 2dlk_A            5 SSGMPCDFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHM--------------------KLHS   64 (79)
T ss_dssp             CSSEECSSTTTCCEESSHHHHHHHHHHGGGSCCCEECSCTTTCCEESSHHHHHHHH--------------------HHHH
T ss_pred             CCCccCCCCCCcCccCCHHHHHHHHHHHhCCCCCeECCCCCCcCccCCHHHHHHHH--------------------HHhC
Confidence            58999987  99999999999999955899999999999  999999999997776                    6788


Q ss_pred             CCCcccCCcchhccC
Q psy8169         121 RLKLHECDLCGKNFS  135 (843)
Q Consensus       121 ~~~~~~C~~C~~~f~  135 (843)
                      ++++|.|..|++.|.
T Consensus        65 ~~~~~~C~~C~k~F~   79 (79)
T 2dlk_A           65 DTRDYICEFSGPSSG   79 (79)
T ss_dssp             TSCCCSCCSSSCCCC
T ss_pred             CCCCeeCCCCCCCCC
Confidence            899999999999883

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1

Probab=99.34  E-value=1.8e-13  Score=101.39  Aligned_cols=55  Identities=31%  Similarity=0.666  Sum_probs=50.8

Q ss_pred             ccccchhhhhhhHHHHhhhhhhhc-CCCCCCcchhhhhcCCcceeeeeecCCCCCCCCccccchhhchhhhhhhhhhhHH
Q psy8169         713 IRCELCDKSFTRKDSLKKHNRIFH-GGADPKVMDEQMARGSADFLEVVLNEDGEGEPVSITNEILCKICNRTFTRNYNLK  791 (843)
Q Consensus       713 ~~C~~C~~~f~~~~~L~~H~~~~H-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~C~~~F~~~~~L~  791 (843)
                      |.|+.|++.|.+...|..|++.+| .++++                                 |.|++||+.|.+.+.|.
T Consensus        11 ~~C~~C~k~f~~~~~l~~H~~~~H~~~~~~---------------------------------~~C~~C~k~f~~~~~L~   57 (66)
T 2drp_A           11 YRCKVCSRVYTHISNFCRHYVTSHKRNVKV---------------------------------YPCPFCFKEFTRKDNMT   57 (66)
T ss_dssp             EECTTTCCEESSHHHHHHHHHHHSSSSCCC---------------------------------EECTTTCCEESCHHHHH
T ss_pred             eECCCCcchhCCHHHHHHHHHHHcCCCCcC---------------------------------eECCCCCCccCCHHHHH
Confidence            999999999999999999999966 45777                                 99999999999999999


Q ss_pred             HHHhHhhcc
Q psy8169         792 KHMKTVHKI  800 (843)
Q Consensus       792 ~H~~~~H~~  800 (843)
                      .|++.+|++
T Consensus        58 ~H~~~~H~i   66 (66)
T 2drp_A           58 AHVKIIHKI   66 (66)
T ss_dssp             HHHHHHTC-
T ss_pred             HHHHHHcCC
Confidence            999999984

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.33  E-value=5e-13  Score=100.75  Aligned_cols=65  Identities=31%  Similarity=0.496  Sum_probs=58.5

Q ss_pred             HHhhcCCCCccccccchhhcCCHHHHHHHHhhccCCCCCcccccccccccCCHHHHHHhHHhhccCCC
Q psy8169           8 HIKSHEYVENHMCELCYKVFESRENLMRHLKIHDDKESKRFKCEQCDKRFSSNAELNKHSSAIHQRLK   75 (843)
Q Consensus         8 h~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~   75 (843)
                      +.++|.++++|.|++|++.|.+...|..|+++|.+  ++||.|++|++.|.+...|..|+ +.|.++.
T Consensus         5 ~~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~--~~~~~C~~C~~~f~~~~~L~~H~-~~H~~~~   69 (72)
T 1x6e_A            5 SSGIHSGEKPYGCVECGKAFSRSSILVQHQRVHTG--EKPYKCLECGKAFSQNSGLINHQ-RIHTSGP   69 (72)
T ss_dssp             CCCTTTTCCCEECSSSCCEESSHHHHHHHHHGGGC--SCCEECSSSCCEESSHHHHHHHH-HHHHSSS
T ss_pred             CCcccCCCCCccCCCCCCccCCHHHHHHHHHhcCC--CCCeECCCCCcccCCHHHHHHHH-HhcCCCC
Confidence            35789999999999999999999999999999987  58999999999999999999998 5576553

>2gqj_A Zinc finger protein KIAA1196; ZF-C2H2 like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.33  E-value=4.3e-13  Score=108.13  Aligned_cols=74  Identities=22%  Similarity=0.403  Sum_probs=65.0

Q ss_pred             HHHHHHhhcCCCCccccccchhhcC-CHHHHHHHHhhccCCCCCcccccccccccCCHHHHHHhHHhhccCCCceeC
Q psy8169           4 IISEHIKSHEYVENHMCELCYKVFE-SRENLMRHLKIHDDKESKRFKCEQCDKRFSSNAELNKHSSAIHQRLKLHEC   79 (843)
Q Consensus         4 ~l~~h~~~h~~~~~~~C~~C~~~f~-~~~~l~~H~~~h~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~C   79 (843)
                      .+..|+++|.++++|.|++|++.|. +...|..|+++|++. +++|.|++|++.|.+...|..|+ +.|.+++|+..
T Consensus        11 ~~~~h~~~h~~~~~~~C~~C~k~f~~~~~~L~~H~~~h~~~-~~~~~C~~C~k~F~~~~~L~~H~-~~h~~~kp~~~   85 (98)
T 2gqj_A           11 PEEQWQRAIHERGEAVCPTCNVVTRKTLVGLKKHMEVCQKL-QDALKCQHCRKQFKSKAGLNYHT-MAEHSAKPSDA   85 (98)
T ss_dssp             SCSHHHHTTTTTSCCCCTTTCCCCSSCSHHHHHHHHHHHHH-HHHHSCSSSCCCCSCHHHHHHHH-HHHSCSCSSCC
T ss_pred             cHHHHHHHhccCCCcCCCCCCCChhhhHHHHHHHHHHHcCC-CCCEECCCCCCccCCHHHHHHHH-HHHcCCCCCCC
Confidence            3568999999999999999999999 999999999999862 38999999999999999999998 55777777543

>2lv2_A Insulinoma-associated protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.32  E-value=1.2e-12  Score=100.20  Aligned_cols=59  Identities=22%  Similarity=0.529  Sum_probs=53.6

Q ss_pred             CCCCCCCccccccccchhhhhhhhhccccCCCCCCccchhhcccccccccccccccccchhhhhhhHHHHhhhhhhhcCC
Q psy8169         659 PIDRIPCTLCDKTFTRKDSLKKHIRIFHTQNQPQHTNVIEVALGARANAAFIDRIRCELCDKSFTRKDSLKKHNRIFHGG  738 (843)
Q Consensus       659 ~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~p~~~~~~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~  738 (843)
                      +...|.|++|++.|.+...|..|+++ |.+++|                     |+|++|+++|.++..|.+|++..|.+
T Consensus        25 ~~~~h~C~~Cgk~F~~~~~L~~H~~~-H~~~k~---------------------~~C~~C~k~F~~~~~L~~H~~~~H~~   82 (85)
T 2lv2_A           25 SAECHLCPVCGESFASKGAQERHLRL-LHAAQV---------------------FPCKYCPATFYSSPGLTRHINKCHPS   82 (85)
T ss_dssp             CCTTEECTTSCCEESSHHHHHHHHHT-TSCSSS---------------------EECTTSSCEESSHHHHHHHHHTTCTT
T ss_pred             CCCCEECCCCCCCcCcHHHHhhhhhh-ccCCCc---------------------cCCCCCCCEeCCHHHHHHhCcccCcC
Confidence            34459999999999999999999998 889999                     99999999999999999999877864


Q ss_pred             C
Q psy8169         739 A  739 (843)
Q Consensus       739 ~  739 (843)
                      +
T Consensus        83 E   83 (85)
T 2lv2_A           83 E   83 (85)
T ss_dssp             C
T ss_pred             C
Confidence            4

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.31  E-value=1.5e-12  Score=97.53  Aligned_cols=64  Identities=23%  Similarity=0.306  Sum_probs=57.5

Q ss_pred             hcCCCCccccccchhhcCCHHHHHHHHhhccCCCCCcccccccccccCCHHHHHHhHHhhccCCCce
Q psy8169          11 SHEYVENHMCELCYKVFESRENLMRHLKIHDDKESKRFKCEQCDKRFSSNAELNKHSSAIHQRLKLH   77 (843)
Q Consensus        11 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~   77 (843)
                      +|.++++|.|++|++.|.+...|..|+++|.+  +++|.|++|++.|.+...|..|+ ..|.+++|.
T Consensus         3 s~~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~--~~~~~C~~C~~~f~~~~~L~~H~-~~h~~~~p~   66 (70)
T 1x5w_A            3 SGSSGHPEKCSECSYSCSSKAALRIHERIHCT--DRPFKCNYCSFDTKQPSNLSKHM-KKFHGDMSG   66 (70)
T ss_dssp             SCCCCCSEECSSSSCEESSHHHHHHHHGGGCC--SCSEECSSSSCEESSHHHHHHHH-HHHHSSSCC
T ss_pred             CCCCCCCeECCCCCcccCCHHHHHHHHHHcCC--CCCEeCCCCCCccCCHHHHHHHH-HHHhCCCCC
Confidence            57889999999999999999999999999987  58999999999999999999998 556666653

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.30  E-value=8.9e-13  Score=98.78  Aligned_cols=58  Identities=31%  Similarity=0.517  Sum_probs=52.8

Q ss_pred             ccccchhhhhhhHHHHhhhhhhhcCCCCCCcchhhhhcCCcceeeeeecCCCCCCCCccccchhhchhhhhhhhhhhHHH
Q psy8169         713 IRCELCDKSFTRKDSLKKHNRIFHGGADPKVMDEQMARGSADFLEVVLNEDGEGEPVSITNEILCKICNRTFTRNYNLKK  792 (843)
Q Consensus       713 ~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~C~~~F~~~~~L~~  792 (843)
                      |+|++|++.|.+...|..|++.|++ +++                                 |.|.+|++.|.+...|..
T Consensus        10 ~~C~~C~k~f~~~~~L~~H~~~H~~-~~~---------------------------------~~C~~C~~~f~~~~~L~~   55 (70)
T 1x5w_A           10 EKCSECSYSCSSKAALRIHERIHCT-DRP---------------------------------FKCNYCSFDTKQPSNLSK   55 (70)
T ss_dssp             EECSSSSCEESSHHHHHHHHGGGCC-SCS---------------------------------EECSSSSCEESSHHHHHH
T ss_pred             eECCCCCcccCCHHHHHHHHHHcCC-CCC---------------------------------EeCCCCCCccCCHHHHHH
Confidence            9999999999999999999999655 777                                 999999999999999999


Q ss_pred             HHhHhhccCCCC
Q psy8169         793 HMKTVHKIDDNE  804 (843)
Q Consensus       793 H~~~~H~~~~~~  804 (843)
                      |++++|+..+.+
T Consensus        56 H~~~h~~~~p~p   67 (70)
T 1x5w_A           56 HMKKFHGDMSGP   67 (70)
T ss_dssp             HHHHHHSSSCCS
T ss_pred             HHHHHhCCCCCC
Confidence            999999865544

>2ghf_A ZHX1, zinc fingers and homeoboxes protein 1; C2H2 zinc fingers, 4-stranded parallel/anti-parallel beta- sheet, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.28  E-value=1.5e-12  Score=103.72  Aligned_cols=69  Identities=12%  Similarity=0.154  Sum_probs=60.8

Q ss_pred             CCCcccccccccccCCHHHHHHhHHhhc---cCCCceeCCCCCCcccchhhHHhh-hcCCCCCCCCCChHHHhhhhhhhh
Q psy8169          44 ESKRFKCEQCDKRFSSNAELNKHSSAIH---QRLKLHECDLCGKNFSQRNNLKRQ-ANGSNVNNRFSSNAELNKHSSAIH  119 (843)
Q Consensus        44 ~~~~~~C~~C~~~f~~~~~l~~H~~~~h---~~~~~~~C~~C~~~f~~~~~l~~H-~~~~~~~~~~~~~~~l~~h~~~~h  119 (843)
                      +++||.|+.|++.|.+...|..|++.+|   .+++||.|+.|++.|..+..|.+| +                    ++|
T Consensus        15 gekpy~C~~Cgk~F~~~~~L~~H~r~~H~~~~~ekpf~C~~Cgk~F~~~~~L~~H~~--------------------r~H   74 (102)
T 2ghf_A           15 VEGGYECKYCTFQTPDLNMFTFHVDSEHPNVVLNSSYVCVECNFLTKRYDALSEHNL--------------------KYH   74 (102)
T ss_dssp             CCSSEECSSCSCEESCHHHHHHHHHHHCSSCCCSCCEEETTTTEEESSTHHHHTHHH--------------------HTS
T ss_pred             CCcCcCCCCCCCccCCHHHHHHHHHhhCCCCCCCCCcCCCCCCcccCCHHHHHHHHH--------------------Hhc
Confidence            3689999999999999999999986578   568999999999999999999766 4                    789


Q ss_pred             cCCCcccCCcchh
Q psy8169         120 QRLKLHECDLCGK  132 (843)
Q Consensus       120 ~~~~~~~C~~C~~  132 (843)
                      .++++|.|..+..
T Consensus        75 tgekpy~C~~~~~   87 (102)
T 2ghf_A           75 PGEENFKLTMVKR   87 (102)
T ss_dssp             TTCCCEEEEECCC
T ss_pred             CCCCCeeCCcccC
Confidence            9999999987543

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.28  E-value=2.6e-12  Score=98.36  Aligned_cols=58  Identities=36%  Similarity=0.815  Sum_probs=53.8

Q ss_pred             CCCCCccccccccchhhhhhhhhccccCCCCCCccchhhcccccccccccccccccchhhhhhhHHHHhhhhhhhcCCCC
Q psy8169         661 DRIPCTLCDKTFTRKDSLKKHIRIFHTQNQPQHTNVIEVALGARANAAFIDRIRCELCDKSFTRKDSLKKHNRIFHGGAD  740 (843)
Q Consensus       661 ~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~p~~~~~~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~  740 (843)
                      .+|.|++|++.|.+...|..|++. |.+++|                     |+|++|++.|.....|..|++.|++ ++
T Consensus        17 ~~~~C~~C~~~f~~~~~l~~H~~~-h~~~~~---------------------~~C~~C~~~f~~~~~L~~H~~~H~~-~~   73 (77)
T 2cot_A           17 RRYKCDECGKSFSHSSDLSKHRRT-HTGEKP---------------------YKCDECGKAFIQRSHLIGHHRVHTG-SG   73 (77)
T ss_dssp             CSSBCSSSCCBCSCHHHHHHHHTT-TCCSCS---------------------EECSSSCCEESSHHHHHHHGGGSCC-CC
T ss_pred             CCEECCCCCcccCCHHHHHHHHHH-cCCCcC---------------------eeCCCCCCccCCHHHHHHHHHHhCC-CC
Confidence            449999999999999999999998 988888                     9999999999999999999998666 77


Q ss_pred             C
Q psy8169         741 P  741 (843)
Q Consensus       741 ~  741 (843)
                      |
T Consensus        74 p   74 (77)
T 2cot_A           74 P   74 (77)
T ss_dssp             C
T ss_pred             C
Confidence            7

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.28  E-value=2.4e-12  Score=98.98  Aligned_cols=69  Identities=28%  Similarity=0.460  Sum_probs=61.6

Q ss_pred             hcCCCCccccccchhhcCCHHHHHHHHhhccCC-CCCcccccccccccCCHHHHHHhHHhhccCCCceeC
Q psy8169          11 SHEYVENHMCELCYKVFESRENLMRHLKIHDDK-ESKRFKCEQCDKRFSSNAELNKHSSAIHQRLKLHEC   79 (843)
Q Consensus        11 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~-~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~C   79 (843)
                      .|+++++|.|++|++.|.+...|..|+++|.++ .+++|.|++|++.|.+...|..|++.+|.+.++...
T Consensus         1 ~h~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~~~~~~~~   70 (78)
T 2d9h_A            1 GSSGSSGLQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKSHPALLLAPQ   70 (78)
T ss_dssp             CCCSCCCEECSSSCCEESSHHHHHHHHHHHHHHTTTCCEECTTTCCEESSHHHHHHHHHHTSTTTSSCCS
T ss_pred             CCCCCcCeECCCCCCeeCCHHHHHHHHHHhhccCCCcccCCCCCCchhCCHHHHHHHHHHhCCCCCCCcc
Confidence            488999999999999999999999999999852 148999999999999999999999888988876543

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.26  E-value=1.3e-12  Score=98.45  Aligned_cols=54  Identities=30%  Similarity=0.618  Sum_probs=50.5

Q ss_pred             ccccchhhhhhhHHHHhhhhhhhcCCCCCCcchhhhhcCCcceeeeeecCCCCCCCCccccchhhchhhhhhhhhhhHHH
Q psy8169         713 IRCELCDKSFTRKDSLKKHNRIFHGGADPKVMDEQMARGSADFLEVVLNEDGEGEPVSITNEILCKICNRTFTRNYNLKK  792 (843)
Q Consensus       713 ~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~C~~~F~~~~~L~~  792 (843)
                      |+|++|++.|.....|..|++.|++ +++                                 |.|++|++.|.+...|..
T Consensus        15 ~~C~~C~k~f~~~~~L~~H~~~h~~-~~~---------------------------------~~C~~C~~~f~~~~~L~~   60 (72)
T 1x6e_A           15 YGCVECGKAFSRSSILVQHQRVHTG-EKP---------------------------------YKCLECGKAFSQNSGLIN   60 (72)
T ss_dssp             EECSSSCCEESSHHHHHHHHHGGGC-SCC---------------------------------EECSSSCCEESSHHHHHH
T ss_pred             ccCCCCCCccCCHHHHHHHHHhcCC-CCC---------------------------------eECCCCCcccCCHHHHHH
Confidence            9999999999999999999999665 777                                 999999999999999999


Q ss_pred             HHhHhhcc
Q psy8169         793 HMKTVHKI  800 (843)
Q Consensus       793 H~~~~H~~  800 (843)
                      |+++|++.
T Consensus        61 H~~~H~~~   68 (72)
T 1x6e_A           61 HQRIHTSG   68 (72)
T ss_dssp             HHHHHHSS
T ss_pred             HHHhcCCC
Confidence            99998874

>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1}

Probab=99.26  E-value=9.4e-13  Score=113.11  Aligned_cols=81  Identities=15%  Similarity=0.100  Sum_probs=42.9

Q ss_pred             hcCCCCccccccchhh--cCCHHHHHHHHhhccCCCCCcccccccccccC------CHHHHHHhHHhhccCCCceeCCCC
Q psy8169          11 SHEYVENHMCELCYKV--FESRENLMRHLKIHDDKESKRFKCEQCDKRFS------SNAELNKHSSAIHQRLKLHECDLC   82 (843)
Q Consensus        11 ~h~~~~~~~C~~C~~~--f~~~~~l~~H~~~h~~~~~~~~~C~~C~~~f~------~~~~l~~H~~~~h~~~~~~~C~~C   82 (843)
                      .+.|.++|.|...+..  |.....+..|.....   .+++.|++|.+.|.      ....|..|+  .|.+++||.|++|
T Consensus         6 ~~~~~k~~~~~~k~~~~~~s~ee~~~~~~l~~~---~~~~~c~~~~~~~~~~~~~~~~~~l~~h~--~h~~~~~~~C~~C   80 (129)
T 2wbt_A            6 VDSGSKKYLSNHKGIFIHVTLEELKRYHQLTPE---QKRLIRAIVKTLIHNPQLLDESSYLYRLL--ASKAISQFVCPLC   80 (129)
T ss_dssp             CCTTCCGGGGCSSCEEEECCHHHHHHHTTSCHH---HHHHHHHHHHHHHHCGGGTTTHHHHHHHH--HHHHHCSEECTTT
T ss_pred             hcccccccccccCCeeeeecHHhhhccccCChh---hCcccchhhhcccCCCcccCCHHHHHHHH--HhCCCCCeECCCC
Confidence            5678888877765543  322222222322222   36677887776654      444455554  2444555555555


Q ss_pred             CCcccchhhHHhhh
Q psy8169          83 GKNFSQRNNLKRQA   96 (843)
Q Consensus        83 ~~~f~~~~~l~~H~   96 (843)
                      ++.|....+|.+|+
T Consensus        81 ~k~f~~~~~l~~H~   94 (129)
T 2wbt_A           81 LMPFSSSVSLKQHI   94 (129)
T ss_dssp             CCEESSHHHHHHHH
T ss_pred             CcccCCHhHHHHHH
Confidence            55555555554443

>3uk3_C Zinc finger protein 217; transcription factor, DNA binding, DNA-metal BI protein complex; 2.10A {Homo sapiens}

Probab=99.26  E-value=3.1e-12  Score=91.33  Aligned_cols=56  Identities=30%  Similarity=0.510  Sum_probs=47.0

Q ss_pred             CCCccccccchhhcCCHHHHHHHHhhccCCCCCcccccccccccCCHHHHHHhHHhhc
Q psy8169          14 YVENHMCELCYKVFESRENLMRHLKIHDDKESKRFKCEQCDKRFSSNAELNKHSSAIH   71 (843)
Q Consensus        14 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h   71 (843)
                      |+++|.|++|++.|.+...|..|+++|.+  ++||.|+.|++.|.+...|..|++.+|
T Consensus         1 g~~~~~C~~C~~~f~~~~~l~~H~~~h~~--~~~~~C~~C~~~f~~~~~l~~H~~~hh   56 (57)
T 3uk3_C            1 GSSSRECSYCGKFFRSNYYLNIHLRTHTG--EKPYKCEFCEYAAAQKTSLRYHLERHH   56 (57)
T ss_dssp             ----CBCTTTCCBCSCHHHHHHHHHHHHC--CCCEECSSSSCEESSHHHHHHHHHHHC
T ss_pred             CCCCccCCCCcchhCChHHHHHHHHHcCC--CCCcCCCCCcchhCCHHHHHHHHHHhc
Confidence            46789999999999999999999999987  589999999999999999999985544

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1

Probab=99.26  E-value=2.1e-12  Score=95.52  Aligned_cols=61  Identities=26%  Similarity=0.522  Sum_probs=53.6

Q ss_pred             HhhcCCCCccccccchhhcCCHHHHHHHHhh-c-cCCCCCcccccccccccCCHHHHHHhHHhhc
Q psy8169           9 IKSHEYVENHMCELCYKVFESRENLMRHLKI-H-DDKESKRFKCEQCDKRFSSNAELNKHSSAIH   71 (843)
Q Consensus         9 ~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~-h-~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h   71 (843)
                      +++|+++++|.|++|++.|.+...|..|+++ | .+  ++||.|+.|++.|.+...|..|++.+|
T Consensus         2 ~~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~~H~~~--~~~~~C~~C~k~f~~~~~L~~H~~~~H   64 (66)
T 2drp_A            2 EFTKEGEHTYRCKVCSRVYTHISNFCRHYVTSHKRN--VKVYPCPFCFKEFTRKDNMTAHVKIIH   64 (66)
T ss_dssp             -CEEEETTEEECTTTCCEESSHHHHHHHHHHHSSSS--CCCEECTTTCCEESCHHHHHHHHHHHT
T ss_pred             ccccCCCcceECCCCcchhCCHHHHHHHHHHHcCCC--CcCeECCCCCCccCCHHHHHHHHHHHc
Confidence            4678999999999999999999999999998 6 34  589999999999999999999986554

>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1}

Probab=99.23  E-value=1.9e-12  Score=111.17  Aligned_cols=111  Identities=17%  Similarity=0.282  Sum_probs=80.4

Q ss_pred             hhhcCCCcccCCcchhc--cCChhHHHHhHhhhcCCCCccccccccccccc------CHHHHHHHHhhcCC-Ccccccch
Q psy8169         117 AIHQRLKLHECDLCGKN--FSQRNNLKRHLEEVHRTDGMKFECYVCSKVLA------TSHSLKRHLLIHNG-PKYTCEIC  187 (843)
Q Consensus       117 ~~h~~~~~~~C~~C~~~--f~~~~~l~~H~~~~h~~~~~~~~C~~C~~~f~------~~~~l~~H~~~h~~-~~~~C~~C  187 (843)
                      .++.+.++|.|...+..  |.....+..|..  . ...+.+.|.+|...|.      ....|..|++ |++ .+|.|.+|
T Consensus         5 ~~~~~~k~~~~~~k~~~~~~s~ee~~~~~~l--~-~~~~~~~c~~~~~~~~~~~~~~~~~~l~~h~~-h~~~~~~~C~~C   80 (129)
T 2wbt_A            5 DVDSGSKKYLSNHKGIFIHVTLEELKRYHQL--T-PEQKRLIRAIVKTLIHNPQLLDESSYLYRLLA-SKAISQFVCPLC   80 (129)
T ss_dssp             CCCTTCCGGGGCSSCEEEECCHHHHHHHTTS--C-HHHHHHHHHHHHHHHHCGGGTTTHHHHHHHHH-HHHHCSEECTTT
T ss_pred             hhcccccccccccCCeeeeecHHhhhccccC--C-hhhCcccchhhhcccCCCcccCCHHHHHHHHH-hCCCCCeECCCC
Confidence            35667888988775543  333333233321  1 3345688888887665      5677777774 554 55999999


Q ss_pred             hHhhcCHHHHHHHHhhccCccccCccccCcccccccchhhHHHhhhhcC
Q psy8169         188 AKEFTRVYELNIHKKLHEDESVANQLKCEFCGKVFLKKSNLKAHIENNH  236 (843)
Q Consensus       188 ~~~f~~~~~L~~H~~~h~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~H  236 (843)
                      ++.|.....|..|+++|  +   ++|.|+.|++.|.....|..|++..|
T Consensus        81 ~k~f~~~~~l~~H~~~H--~---~~~~C~~C~k~f~~~~~l~~H~~~h~  124 (129)
T 2wbt_A           81 LMPFSSSVSLKQHIRYT--E---HTKVCPVCKKEFTSTDSALDHVCKKH  124 (129)
T ss_dssp             CCEESSHHHHHHHHHHT--C---CCCBCTTTCCBCSSHHHHHHHHHHTT
T ss_pred             CcccCCHhHHHHHHHHC--C---CCCCCCCCCcccCCHHHHHHHHHHHC
Confidence            99999999999999998  3   78999999999999999999986655

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1

Probab=99.23  E-value=6.5e-12  Score=90.70  Aligned_cols=57  Identities=30%  Similarity=0.713  Sum_probs=50.6

Q ss_pred             CccccccchhhcCCHHHHHHHHhhccCCCCCcccccccccccCCHHHHHHhHHhhccCC
Q psy8169          16 ENHMCELCYKVFESRENLMRHLKIHDDKESKRFKCEQCDKRFSSNAELNKHSSAIHQRL   74 (843)
Q Consensus        16 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~   74 (843)
                      ++|.|++|++.|.+...|..|+++|.+  .+||.|+.|++.|.+...|..|++.+|.+.
T Consensus         1 k~~~C~~C~~~f~~~~~l~~H~~~h~~--~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~   57 (60)
T 2adr_A            1 RSFVCEVCTRAFARQEHLKRHYRSHTN--EKPYPCGLCNRAFTRRDLLIRHAQKIHSGN   57 (60)
T ss_dssp             CCBCCTTTCCCBSCHHHHHHHHHTTTS--SCSEECTTTCCEESSHHHHHHHHTTTSCCS
T ss_pred             CcCcCCCCccccCCHHHHHHHHHHhCC--CCCccCCCCCCccCCHHHHHHHHHHHcCCc
Confidence            479999999999999999999999987  589999999999999999999986778754

>2ctd_A Zinc finger protein 512; zinc binding, two ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.23  E-value=6.8e-12  Score=99.80  Aligned_cols=68  Identities=18%  Similarity=0.278  Sum_probs=62.1

Q ss_pred             hhhcCCHHHHHHHHhhccCCCCCccccccccccc-CCHHHHHHhHHhhccCCCceeCCCCCCcccchhhHHhh
Q psy8169          24 YKVFESRENLMRHLKIHDDKESKRFKCEQCDKRF-SSNAELNKHSSAIHQRLKLHECDLCGKNFSQRNNLKRQ   95 (843)
Q Consensus        24 ~~~f~~~~~l~~H~~~h~~~~~~~~~C~~C~~~f-~~~~~l~~H~~~~h~~~~~~~C~~C~~~f~~~~~l~~H   95 (843)
                      ..+|.....|..|++.|.+  .++|.|+.|++.| .+...|..|+ ..| ++++|.|.+|++.|..+..|.+|
T Consensus        13 ~~~~~~~~~~~~~~~~~~~--~~~~~C~~C~k~F~~~~~~L~~H~-~~h-~~k~~~C~~Cgk~F~~~~~L~~H   81 (96)
T 2ctd_A           13 PPVYAAGSLEEQWYLEIVD--KGSVSCPTCQAVGRKTIEGLKKHM-ENC-KQEMFTCHHCGKQLRSLAGMKYH   81 (96)
T ss_dssp             CCSSCTTCHHHHHHHHHHH--TSCEECTTTCSCEESSHHHHHHHH-HHH-CCCCCCCSSSCCCCSSHHHHHHH
T ss_pred             CCCCCCchHHHHHHHHhcC--CCCcCCCCCCCCcccCHHHHHHHH-HHH-CCCCeECCCCCCeeCCHHHHHHH
Confidence            4577888899999999987  5899999999999 9999999998 668 99999999999999999999777

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.22  E-value=2.6e-12  Score=98.76  Aligned_cols=56  Identities=25%  Similarity=0.496  Sum_probs=51.3

Q ss_pred             ccccchhhhhhhHHHHhhhhhhhcC--CCCCCcchhhhhcCCcceeeeeecCCCCCCCCccccchhhchhhhhhhhhhhH
Q psy8169         713 IRCELCDKSFTRKDSLKKHNRIFHG--GADPKVMDEQMARGSADFLEVVLNEDGEGEPVSITNEILCKICNRTFTRNYNL  790 (843)
Q Consensus       713 ~~C~~C~~~f~~~~~L~~H~~~~H~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~C~~~F~~~~~L  790 (843)
                      |+|++|++.|.+...|..|++.|++  ++++                                 |.|.+|++.|.....|
T Consensus         8 ~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~~---------------------------------~~C~~C~k~f~~~~~L   54 (78)
T 2d9h_A            8 LQCEICGFTCRQKASLNWHQRKHAETVAALR---------------------------------FPCEFCGKRFEKPDSV   54 (78)
T ss_dssp             EECSSSCCEESSHHHHHHHHHHHHHHTTTCC---------------------------------EECTTTCCEESSHHHH
T ss_pred             eECCCCCCeeCCHHHHHHHHHHhhccCCCcc---------------------------------cCCCCCCchhCCHHHH
Confidence            9999999999999999999999876  3555                                 9999999999999999


Q ss_pred             HHHHhHhhccC
Q psy8169         791 KKHMKTVHKID  801 (843)
Q Consensus       791 ~~H~~~~H~~~  801 (843)
                      ..|++.+|...
T Consensus        55 ~~H~~~~H~~~   65 (78)
T 2d9h_A           55 AAHRSKSHPAL   65 (78)
T ss_dssp             HHHHHHTSTTT
T ss_pred             HHHHHHhCCCC
Confidence            99999999753

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A

Probab=99.20  E-value=1.3e-11  Score=88.02  Aligned_cols=56  Identities=25%  Similarity=0.547  Sum_probs=49.6

Q ss_pred             ccccccchhhcCCHHHHHHHHhhccCCCCCcccccccccccCCHHHHHHhHHhhccCCC
Q psy8169          17 NHMCELCYKVFESRENLMRHLKIHDDKESKRFKCEQCDKRFSSNAELNKHSSAIHQRLK   75 (843)
Q Consensus        17 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~   75 (843)
                      +|.|++|++.|.+...|..|+++|.+  .+||.|+.|++.|.+...|..|+ ..|.+++
T Consensus         1 p~~C~~C~~~f~~~~~l~~H~~~h~~--~~~~~C~~C~~~f~~~~~l~~H~-~~h~~~k   56 (57)
T 1bbo_A            1 KYICEECGIRXKKPSMLKKHIRTHTD--VRPYHCTYCNFSFKTKGNLTKHM-KSKAHSK   56 (57)
T ss_dssp             CCBCTTTCCBCSSHHHHHHHHHHTSS--CCCEECSSSSCEESSHHHHHHHH-HSSSSCC
T ss_pred             CCcCCCCcCcCCCHHHHHHHHHhcCC--CCCccCCCCCchhcCHHHHHHHH-HHhcccC
Confidence            68999999999999999999999987  58999999999999999999998 5565543

>3uk3_C Zinc finger protein 217; transcription factor, DNA binding, DNA-metal BI protein complex; 2.10A {Homo sapiens}

Probab=99.19  E-value=1.4e-11  Score=87.87  Aligned_cols=55  Identities=24%  Similarity=0.488  Sum_probs=51.0

Q ss_pred             ceeecCcChhccCChHHHHHHHHHhcCCCceeccccchhcCChhhHHHHHHHccC
Q psy8169         274 VYLTCLICFKTFLTEVDLGKHMKMHMDDNQIQCRFCNKYFSRNYNLKQHMKTCTK  328 (843)
Q Consensus       274 ~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~  328 (843)
                      .+|.|++|++.|.+...|..|+++|.++++|.|+.|++.|.+...|..|+++|++
T Consensus         3 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~hh~   57 (57)
T 3uk3_C            3 SSRECSYCGKFFRSNYYLNIHLRTHTGEKPYKCEFCEYAAAQKTSLRYHLERHHK   57 (57)
T ss_dssp             --CBCTTTCCBCSCHHHHHHHHHHHHCCCCEECSSSSCEESSHHHHHHHHHHHC-
T ss_pred             CCccCCCCcchhCChHHHHHHHHHcCCCCCcCCCCCcchhCCHHHHHHHHHHhcC
Confidence            3799999999999999999999999999999999999999999999999999863

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1

Probab=99.19  E-value=5.2e-12  Score=91.21  Aligned_cols=55  Identities=36%  Similarity=0.779  Sum_probs=50.1

Q ss_pred             cccccchhhhhhhHHHHhhhhhhhcCCCCCCcchhhhhcCCcceeeeeecCCCCCCCCccccchhhchhhhhhhhhhhHH
Q psy8169         712 RIRCELCDKSFTRKDSLKKHNRIFHGGADPKVMDEQMARGSADFLEVVLNEDGEGEPVSITNEILCKICNRTFTRNYNLK  791 (843)
Q Consensus       712 ~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~C~~~F~~~~~L~  791 (843)
                      +|+|++|++.|.+...|..|++.|++ +++                                 |.|++|++.|.+.+.|.
T Consensus         2 ~~~C~~C~~~f~~~~~l~~H~~~h~~-~~~---------------------------------~~C~~C~~~f~~~~~l~   47 (60)
T 2adr_A            2 SFVCEVCTRAFARQEHLKRHYRSHTN-EKP---------------------------------YPCGLCNRAFTRRDLLI   47 (60)
T ss_dssp             CBCCTTTCCCBSCHHHHHHHHHTTTS-SCS---------------------------------EECTTTCCEESSHHHHH
T ss_pred             cCcCCCCccccCCHHHHHHHHHHhCC-CCC---------------------------------ccCCCCCCccCCHHHHH
Confidence            49999999999999999999999665 666                                 99999999999999999


Q ss_pred             HHHhHhhcc
Q psy8169         792 KHMKTVHKI  800 (843)
Q Consensus       792 ~H~~~~H~~  800 (843)
                      .|++..|..
T Consensus        48 ~H~~~~H~~   56 (60)
T 2adr_A           48 RHAQKIHSG   56 (60)
T ss_dssp             HHHTTTSCC
T ss_pred             HHHHHHcCC
Confidence            999877764

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A

Probab=99.18  E-value=2e-11  Score=87.07  Aligned_cols=56  Identities=29%  Similarity=0.464  Sum_probs=52.8

Q ss_pred             eeecCcChhccCChHHHHHHHHHhcCCCceeccccchhcCChhhHHHHHHHccCCC
Q psy8169         275 YLTCLICFKTFLTEVDLGKHMKMHMDDNQIQCRFCNKYFSRNYNLKQHMKTCTKNV  330 (843)
Q Consensus       275 ~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~  330 (843)
                      +|.|++|++.|.+...|..|+++|.++++|.|+.|++.|.+...|..|+++|+++.
T Consensus         1 p~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~k   56 (57)
T 1bbo_A            1 KYICEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSKAHSK   56 (57)
T ss_dssp             CCBCTTTCCBCSSHHHHHHHHHHTSSCCCEECSSSSCEESSHHHHHHHHHSSSSCC
T ss_pred             CCcCCCCcCcCCCHHHHHHHHHhcCCCCCccCCCCCchhcCHHHHHHHHHHhcccC
Confidence            48899999999999999999999999999999999999999999999999987653

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.18  E-value=2.8e-11  Score=91.69  Aligned_cols=59  Identities=24%  Similarity=0.483  Sum_probs=55.7

Q ss_pred             cceeecCcChhccCChHHHHHHHHHhcCCCceeccccchhcCChhhHHHHHHHccCCCC
Q psy8169         273 NVYLTCLICFKTFLTEVDLGKHMKMHMDDNQIQCRFCNKYFSRNYNLKQHMKTCTKNVS  331 (843)
Q Consensus       273 ~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~  331 (843)
                      ..+|.|.+|++.|.+...|..|+++|.++++|.|..|++.|.+...|..|+++|+++.+
T Consensus        15 ~~~~~C~~C~k~f~~~~~l~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~kp   73 (74)
T 2lce_A           15 DKPYKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLKTHTRIHSGEKP   73 (74)
T ss_dssp             CCSBCCTTSSCCBSCHHHHHHHHHHHCCCCSEECTTTCCEESCHHHHHHHHHHHCCSCC
T ss_pred             CCCeECCCCCceeCCHHHHHHHHHHcCCCCCEECCCCCchhCCHHHHHHHHHhcCCCCC
Confidence            34799999999999999999999999999999999999999999999999999988765

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1

Probab=99.14  E-value=7.9e-12  Score=94.59  Aligned_cols=67  Identities=33%  Similarity=0.747  Sum_probs=57.6

Q ss_pred             hhhhhhhhccccCCCCCCccchhhccccccccccccccccc--chhhhhhhHHHHhhhhhhhcCCCCCCcchhhhhcCCc
Q psy8169         676 DSLKKHIRIFHTQNQPQHTNVIEVALGARANAAFIDRIRCE--LCDKSFTRKDSLKKHNRIFHGGADPKVMDEQMARGSA  753 (843)
Q Consensus       676 ~~L~~H~~~~H~~~~p~~~~~~~~~~~~~~~~~~~~~~~C~--~C~~~f~~~~~L~~H~~~~H~~~~~~~~~~~~~~~~~  753 (843)
                      ..|..|+...|.+++|                     |.|+  .|++.|.++..|..|++.|++ +++            
T Consensus         4 ~~~~~~~~~~~~~~~~---------------------~~C~~~~C~k~f~~~~~l~~H~~~h~~-~~~------------   49 (73)
T 1f2i_G            4 HPMNNLLNYVVPKMRP---------------------YACPVESCDRRFSRSDELTRHIRIHTG-QKP------------   49 (73)
T ss_dssp             ----CTTSCCCCCCCC---------------------EECSSTTBCCEESSHHHHHHHHHHHHC-CCC------------
T ss_pred             CCccchhhccCCCCCc---------------------cCCcCCCCCCccCCHHHHHHHHHhhCC-CCC------------
Confidence            4577888888999988                     9997  599999999999999998766 677            


Q ss_pred             ceeeeeecCCCCCCCCccccchhhchhhhhhhhhhhHHHHHhHh
Q psy8169         754 DFLEVVLNEDGEGEPVSITNEILCKICNRTFTRNYNLKKHMKTV  797 (843)
Q Consensus       754 ~~~~~~~~~~~~~~~~~~~~~~~C~~C~~~F~~~~~L~~H~~~~  797 (843)
                                           |.|++||+.|.+.+.|..|+++|
T Consensus        50 ---------------------~~C~~C~~~f~~~~~l~~H~~~H   72 (73)
T 1f2i_G           50 ---------------------FQCRICMRNFSRSDHLTTHIRTH   72 (73)
T ss_dssp             ---------------------EECTTTCCEESCHHHHHHHHTTC
T ss_pred             ---------------------eECCCCCchhCCHHHHHHHHHhc
Confidence                                 99999999999999999999875

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.14  E-value=1.5e-13  Score=104.45  Aligned_cols=69  Identities=26%  Similarity=0.294  Sum_probs=63.5

Q ss_pred             HHHHHHhhcCCCCccccccchhhcCCHHHHHHHHhhccCCCCCcccccccccccCCHHHHHHhHHhhccCCCceeCCCC
Q psy8169           4 IISEHIKSHEYVENHMCELCYKVFESRENLMRHLKIHDDKESKRFKCEQCDKRFSSNAELNKHSSAIHQRLKLHECDLC   82 (843)
Q Consensus         4 ~l~~h~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~C~~C   82 (843)
                      .|..|+++|.++++|.|++|++.|.+...|..         .++|.|+.|++.|.+...|..|+ ..|.++++|.|++|
T Consensus         5 ~l~~H~~~h~~~~~~~C~~C~k~f~~~~~l~~---------~~~~~C~~C~~~f~~~~~l~~H~-~~H~~~~~~~C~~C   73 (73)
T 2ctu_A            5 SSGKRQKIHLGDRSQKCSKCGIIFIRRSTLSR---------RKTPMCEKCRKDSCQEAALNKDE-GNESGKKTSGPSSG   73 (73)
T ss_dssp             SCCCCCCCCCCCSEEECSSSCCEEECCCCCCC---------SSSCCCHHHHHTCSCCCSSCCCS-SCCCCCCCSSCCCC
T ss_pred             hHHHHHHHhCCCCCeeCCcccchhCCHHHhCc---------CCCCCCCCCChhhcCHHHHHHHH-HhhcCCCCCCCCCC
Confidence            46679999999999999999999999988876         38999999999999999999998 77999999999988

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1

Probab=99.10  E-value=3e-11  Score=91.35  Aligned_cols=64  Identities=27%  Similarity=0.590  Sum_probs=50.1

Q ss_pred             HHHHHh-hcCCCCccccc--cchhhcCCHHHHHHHHhhccCCCCCcccccccccccCCHHHHHHhHHhhc
Q psy8169           5 ISEHIK-SHEYVENHMCE--LCYKVFESRENLMRHLKIHDDKESKRFKCEQCDKRFSSNAELNKHSSAIH   71 (843)
Q Consensus         5 l~~h~~-~h~~~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h   71 (843)
                      +..|++ +|.++++|.|+  .|++.|.+...|..|+++|.+  .++|.|+.|++.|.+...|..|+ ..|
T Consensus         6 ~~~~~~~~~~~~~~~~C~~~~C~k~f~~~~~l~~H~~~h~~--~~~~~C~~C~~~f~~~~~l~~H~-~~H   72 (73)
T 1f2i_G            6 MNNLLNYVVPKMRPYACPVESCDRRFSRSDELTRHIRIHTG--QKPFQCRICMRNFSRSDHLTTHI-RTH   72 (73)
T ss_dssp             --CTTSCCCCCCCCEECSSTTBCCEESSHHHHHHHHHHHHC--CCCEECTTTCCEESCHHHHHHHH-TTC
T ss_pred             ccchhhccCCCCCccCCcCCCCCCccCCHHHHHHHHHhhCC--CCCeECCCCCchhCCHHHHHHHH-Hhc
Confidence            334444 57788888887  588888888888888888887  47888888888888888888887 445

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.05  E-value=6.6e-11  Score=79.73  Aligned_cols=45  Identities=20%  Similarity=0.199  Sum_probs=34.7

Q ss_pred             HHHhhcCCCCccccccchhhcCCHHHHHHHHhhccCCCCCccccccc
Q psy8169           7 EHIKSHEYVENHMCELCYKVFESRENLMRHLKIHDDKESKRFKCEQC   53 (843)
Q Consensus         7 ~h~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~C~~C   53 (843)
                      .|+++|+++++|.|++|++.|.+...|.+|+++|++  ++||.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~--~~~~~C~~C   46 (46)
T 2eq4_A            2 SSGSSGTGEKLYNCKECGKSFSRAPCLLKHERLHSG--EKPSGPSSG   46 (46)
T ss_dssp             CCCCCSSCCCCCCBTTTTBCCSCHHHHHHHHHHCCS--SSCCCCCCC
T ss_pred             CCcccCCCCCCeECCCCCCccCchHHHHHHHHhcCC--CCCCCCCCC
Confidence            367778888888888888888888888888888776  477887776

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.05  E-value=1.5e-10  Score=92.96  Aligned_cols=63  Identities=19%  Similarity=0.291  Sum_probs=56.7

Q ss_pred             CccccccchhhcCCHHHHHHHHhh-ccCCCCCc--------ccccccccccCCHHHHHHhHHhhccCCCceeCCC
Q psy8169          16 ENHMCELCYKVFESRENLMRHLKI-HDDKESKR--------FKCEQCDKRFSSNAELNKHSSAIHQRLKLHECDL   81 (843)
Q Consensus        16 ~~~~C~~C~~~f~~~~~l~~H~~~-h~~~~~~~--------~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~C~~   81 (843)
                      ..|.|++|++.|.+...|..|+++ |.++  ++        |.|+.|++.|.+...|..|+ ++|++++||.|+.
T Consensus        24 ~~~~C~~C~k~f~~~~~L~~H~~~~H~~~--~~~~~~~c~~~~C~~C~k~f~~~~~L~~H~-~~H~~~k~~~C~~   95 (95)
T 2ej4_A           24 LSRPKKSCDRTFSTMHELVTHVTMEHVGG--PEQNNHVCYWEECPREGKSFKAKYKLVNHI-RVHTGEKSGPSSG   95 (95)
T ss_dssp             SSSSCCCCCCCCSSHHHHHHHHHHTTTCC--TTCSCCCCCCTTCSSTTCCCSSHHHHHHHH-HHHHTCCCCSSCC
T ss_pred             CCCcccccccccCCHHHHHHHHHHhccCC--CCCCccceeccCCCCCCcccCCHHHHHHHH-HhcCCCCCCCCCC
Confidence            457899999999999999999998 8763  55        99999999999999999998 6799999999973

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.04  E-value=6e-11  Score=79.91  Aligned_cols=45  Identities=24%  Similarity=0.277  Sum_probs=34.2

Q ss_pred             HHHhhcCCCCccccccchhhcCCHHHHHHHHhhccCCCCCccccccc
Q psy8169           7 EHIKSHEYVENHMCELCYKVFESRENLMRHLKIHDDKESKRFKCEQC   53 (843)
Q Consensus         7 ~h~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~C~~C   53 (843)
                      .|+++|+++++|.|++|++.|.+...|..|+++|++  ++||.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~--~~~~~C~~C   46 (46)
T 2eml_A            2 SSGSSGTGEKPYECSVCGKAFSHRQSLSVHQRIHSG--KKPSGPSSG   46 (46)
T ss_dssp             CCCCCCSSCCSEECSSSCCEESSHHHHHHHHGGGSS--CCCSCSSCC
T ss_pred             CccCCcCCCCCeeCCCcCCccCCHHHHHHHHHHhcC--CCCCCCCCC
Confidence            366777777788888888888888888888777776  477777776

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A

Probab=99.04  E-value=6.8e-11  Score=79.58  Aligned_cols=44  Identities=20%  Similarity=0.255  Sum_probs=33.2

Q ss_pred             HHhhcCCCCccccccchhhcCCHHHHHHHHhhccCCCCCccccccc
Q psy8169           8 HIKSHEYVENHMCELCYKVFESRENLMRHLKIHDDKESKRFKCEQC   53 (843)
Q Consensus         8 h~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~C~~C   53 (843)
                      |+++|+++++|.|++|++.|.+...|..|+++|.+  ++||.|+.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~--~k~~~C~~C   46 (46)
T 2emk_A            3 SGSSGTGEKPYECKECGKAFSQTTHLIQHQRVHTG--EKPSGPSSG   46 (46)
T ss_dssp             CCCCCSSSCSCBCSSSCCBCSCHHHHHHHHHHHSS--CCCSSCCCC
T ss_pred             CCCccCCCCceECCCCCchhCCHHHHHHHHHHcCC--CCCCCCCCC
Confidence            66777777777777777777777777777777776  477777766

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.04  E-value=5.6e-11  Score=79.14  Aligned_cols=44  Identities=20%  Similarity=0.257  Sum_probs=34.0

Q ss_pred             HHhhcCCCCccccccchhhcCCHHHHHHHHhhccCCCCCccccccc
Q psy8169           8 HIKSHEYVENHMCELCYKVFESRENLMRHLKIHDDKESKRFKCEQC   53 (843)
Q Consensus         8 h~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~C~~C   53 (843)
                      |+++|+++++|.|++|++.|.+...|..|+++|.+  ++||.|+.|
T Consensus         1 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~--~~~~~C~~C   44 (44)
T 2emx_A            1 GSSGSSGEKPFGCSCCEKAFSSKSYLLVHQQTHAE--EKPSGPSSG   44 (44)
T ss_dssp             CCCCCSSCCCEECSSSSCEESSHHHHHHHHHHHTS--SCSCSCCCC
T ss_pred             CCCCcCCCcCccCCCCCcccCCHHHHHHHHHHhCC--CCCCCCCCC
Confidence            56777778888888888888888888888887776  477877776

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens}

Probab=99.04  E-value=6.6e-11  Score=79.70  Aligned_cols=45  Identities=18%  Similarity=0.134  Sum_probs=35.4

Q ss_pred             HHHhhcCCCCccccccchhhcCCHHHHHHHHhhccCCCCCccccccc
Q psy8169           7 EHIKSHEYVENHMCELCYKVFESRENLMRHLKIHDDKESKRFKCEQC   53 (843)
Q Consensus         7 ~h~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~C~~C   53 (843)
                      .|+++|+++++|.|++|++.|.+...|..|+++|.+  ++||.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~--~~~~~C~~C   46 (46)
T 2em0_A            2 SSGSSGMGEKTWKCRECDMCFSQASSLRLHQNVHVG--EKPSGPSSG   46 (46)
T ss_dssp             CCCCCSCCCCCCCCSSSCCCCSSHHHHHHHGGGGSS--SSCSCSSCC
T ss_pred             CCcCccCCCcCeECCCCCcccCCHHHHHHHHHHcCC--CCCcCCCCC
Confidence            367778888888888888888888888888888876  478888776

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.04  E-value=7e-11  Score=79.56  Aligned_cols=45  Identities=27%  Similarity=0.257  Sum_probs=35.0

Q ss_pred             HHHhhcCCCCccccccchhhcCCHHHHHHHHhhccCCCCCccccccc
Q psy8169           7 EHIKSHEYVENHMCELCYKVFESRENLMRHLKIHDDKESKRFKCEQC   53 (843)
Q Consensus         7 ~h~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~C~~C   53 (843)
                      .|+++|+++++|.|++|++.|.+...|..|+++|++  ++||.|+.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~--~k~~~C~~C   46 (46)
T 2ytn_A            2 SSGSSGTGKKPYKCNECGKVFTQNSHLARHRGIHTG--EKPSGPSSG   46 (46)
T ss_dssp             CCCCCCSCCSSCBCTTTCCBCSSHHHHHHHGGGTSC--CCCCSCCCC
T ss_pred             CCCcCCCCCcCeECCCCCCeeCCHHHHHHHhhhcCC--CCCCCCCCC
Confidence            366778888888888888888888888888888876  477888776

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.03  E-value=7.3e-11  Score=79.52  Aligned_cols=44  Identities=25%  Similarity=0.251  Sum_probs=33.6

Q ss_pred             HHhhcCCCCccccccchhhcCCHHHHHHHHhhccCCCCCccccccc
Q psy8169           8 HIKSHEYVENHMCELCYKVFESRENLMRHLKIHDDKESKRFKCEQC   53 (843)
Q Consensus         8 h~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~C~~C   53 (843)
                      |+++|+++++|.|++|++.|.+...|..|+++|.+  ++||.|++|
T Consensus         3 H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~--~~~~~C~~C   46 (46)
T 2eoe_A            3 SGSSGTGEKPYKCNECGKVFTQNSHLANHQRIHTG--VKPSGPSSG   46 (46)
T ss_dssp             CSSCCCCCCSSEETTTTEECSSHHHHHHHHGGGSC--CCSCSSCCC
T ss_pred             CCCCCCCCCCeECCCcChhhCCHHHHHHHHHHcCC--CCCCCCCCC
Confidence            66777777777777777777777777777777776  477777776

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.03  E-value=6.8e-11  Score=79.59  Aligned_cols=45  Identities=24%  Similarity=0.234  Sum_probs=35.5

Q ss_pred             HHHhhcCCCCccccccchhhcCCHHHHHHHHhhccCCCCCccccccc
Q psy8169           7 EHIKSHEYVENHMCELCYKVFESRENLMRHLKIHDDKESKRFKCEQC   53 (843)
Q Consensus         7 ~h~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~C~~C   53 (843)
                      .|+++|+++++|.|++|++.|.+...|..|+++|.+  ++||.|+.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~--~k~~~C~~c   46 (46)
T 2emf_A            2 SSGSSGTGGKHFECTECGKAFTRKSTLSMHQKIHTG--EKPSGPSSG   46 (46)
T ss_dssp             CCCSSSSSSCCEECSSSCCEESCHHHHHHHGGGTSC--SSCSCCCCC
T ss_pred             ccccccCCCCCeECCCCCchhCCHHHHHHHHHHhCC--CCCCCCCCC
Confidence            367778888888888888888888888888888876  478888776

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.03  E-value=6.2e-11  Score=79.85  Aligned_cols=44  Identities=27%  Similarity=0.269  Sum_probs=33.3

Q ss_pred             HHhhcCCCCccccccchhhcCCHHHHHHHHhhccCCCCCccccccc
Q psy8169           8 HIKSHEYVENHMCELCYKVFESRENLMRHLKIHDDKESKRFKCEQC   53 (843)
Q Consensus         8 h~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~C~~C   53 (843)
                      |+++|+++++|.|++|++.|.+...|.+|+++|.+  ++||.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~--~k~~~C~~C   46 (46)
T 2ene_A            3 SGSSGTGEKPYKCNECGKVFRHNSYLSRHQRIHTG--EKPSGPSSG   46 (46)
T ss_dssp             CCSSCCCSSSEECSSSCCEESSHHHHHHHHTTTCC--CCCCSCCCC
T ss_pred             cccCCCCCCCeECCCCCchhCChHHHHHHHhhcCC--CCCCCCCCC
Confidence            66777777777777777777777777777777776  477777776

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.03  E-value=7.9e-11  Score=79.26  Aligned_cols=45  Identities=22%  Similarity=0.233  Sum_probs=35.3

Q ss_pred             HHHhhcCCCCccccccchhhcCCHHHHHHHHhhccCCCCCccccccc
Q psy8169           7 EHIKSHEYVENHMCELCYKVFESRENLMRHLKIHDDKESKRFKCEQC   53 (843)
Q Consensus         7 ~h~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~C~~C   53 (843)
                      .|+++|+++++|.|++|++.|.+...|.+|+++|.+  ++||.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~--~k~~~C~~C   46 (46)
T 2ytq_A            2 SSGSSGAGEKPYGCSECGKAFSSKSYLIIHMRTHSG--EKPSGPSSG   46 (46)
T ss_dssp             CCSSCSSCCCSCBCSSSCCBCSCHHHHHHHHTTTCC--SCSSCCCCC
T ss_pred             CCCcCcCCCCCcCCCccChhhCChHHHHHHHHHhCC--CCCCCCCCC
Confidence            367778888888888888888888888888888876  477888776

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.03  E-value=7.8e-11  Score=79.29  Aligned_cols=45  Identities=24%  Similarity=0.206  Sum_probs=35.6

Q ss_pred             HHHhhcCCCCccccccchhhcCCHHHHHHHHhhccCCCCCccccccc
Q psy8169           7 EHIKSHEYVENHMCELCYKVFESRENLMRHLKIHDDKESKRFKCEQC   53 (843)
Q Consensus         7 ~h~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~C~~C   53 (843)
                      .|+++|+++++|.|++|++.|.+...|..|+++|.+  ++||.|++|
T Consensus         2 ~h~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~--~~~~~C~~C   46 (46)
T 2elz_A            2 SSGSSGSVEKPYKCEDCGKGYNRRLNLDMHQRVHMG--EKTSGPSSG   46 (46)
T ss_dssp             CCCSCCCCCSSCBCSSSCCBCSSHHHHHHHGGGGGS--CCCCCSCCC
T ss_pred             CCCCCCCCCCCeeCcccCchhCCHHHHHHHHHhcCC--CCCCCCCCC
Confidence            367778888888888888888888888888888876  478888776

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.03  E-value=8.1e-11  Score=79.29  Aligned_cols=45  Identities=20%  Similarity=0.141  Sum_probs=33.3

Q ss_pred             HHHhhcCCCCccccccchhhcCCHHHHHHHHhhccCCCCCccccccc
Q psy8169           7 EHIKSHEYVENHMCELCYKVFESRENLMRHLKIHDDKESKRFKCEQC   53 (843)
Q Consensus         7 ~h~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~C~~C   53 (843)
                      .|+++|+++++|.|++|++.|.+...|..|+++|.+  ++||.|++|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~--~~~~~C~~C   46 (46)
T 2eov_A            2 SSGSSGTGEKPYKCSDCGKSFTWKSRLRIHQKCHTG--ERHSGPSSG   46 (46)
T ss_dssp             CCCCCCSSCCSCBCSSSCCBCSSHHHHHHHHHHHSC--CSSCCSCCC
T ss_pred             CCCCCCCCCCCccCCccChhhCCHHHHHHHHHhcCC--CCCCCCCCC
Confidence            366777777777777777777777777777777776  477777766

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.03  E-value=8.1e-11  Score=79.26  Aligned_cols=45  Identities=24%  Similarity=0.277  Sum_probs=34.4

Q ss_pred             HHHhhcCCCCccccccchhhcCCHHHHHHHHhhccCCCCCccccccc
Q psy8169           7 EHIKSHEYVENHMCELCYKVFESRENLMRHLKIHDDKESKRFKCEQC   53 (843)
Q Consensus         7 ~h~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~C~~C   53 (843)
                      .|+++|+++++|.|++|++.|.+...|..|+++|++  ++||.|+.|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~--~k~~~C~~C   46 (46)
T 2eoq_A            2 SSGSSGTGEKPFKCDICGKSFCGRSRLNRHSMVHTA--EKPSGPSSG   46 (46)
T ss_dssp             CCCCCSSSSCSCCCSSSCCCCSSHHHHHHHHHHTTC--CCSSSCCCC
T ss_pred             CCCCCCCCCCCcCCCcCCchhCCHHHHHHHHHHcCC--CCCCCCCCC
Confidence            366777777888888888888888888888877776  477777776

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.03  E-value=6.9e-11  Score=79.66  Aligned_cols=45  Identities=24%  Similarity=0.286  Sum_probs=34.1

Q ss_pred             HHHhhcCCCCccccccchhhcCCHHHHHHHHhhccCCCCCccccccc
Q psy8169           7 EHIKSHEYVENHMCELCYKVFESRENLMRHLKIHDDKESKRFKCEQC   53 (843)
Q Consensus         7 ~h~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~C~~C   53 (843)
                      .|+++|+++++|.|++|++.|.+...|..|+++|.+  ++||.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~--~k~~~C~~C   46 (46)
T 2emm_A            2 SSGSSGTGERPHKCNECGKSFIQSAHLIQHQRIHTG--EKPSGPSSG   46 (46)
T ss_dssp             CCCSCSSCCCSEECSSSCCEESSHHHHHHHHHHHSC--CCTTSSSCC
T ss_pred             CCcCCcCCCCCeeCCCCChhhCCHHHHHHHHHHhCC--CCCCCCCCC
Confidence            366777777777787788777777777777777776  477777776

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.02  E-value=7e-11  Score=79.58  Aligned_cols=45  Identities=20%  Similarity=0.197  Sum_probs=34.5

Q ss_pred             HHHhhcCCCCccccccchhhcCCHHHHHHHHhhccCCCCCccccccc
Q psy8169           7 EHIKSHEYVENHMCELCYKVFESRENLMRHLKIHDDKESKRFKCEQC   53 (843)
Q Consensus         7 ~h~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~C~~C   53 (843)
                      .|+++|+++++|.|++|++.|.+...|..|+++|.+  ++||.|+.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~--~k~~~C~~C   46 (46)
T 2emy_A            2 SSGSSGTGENPYECHECGKAFSRKYQLISHQRTHAG--EKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCSSCCEECSSSCCEESSHHHHHHHHHHHTT--SCCSCSSCC
T ss_pred             CCCCCCCCCcCcCCCCCCcccCcHHHHHHHHHHcCC--CCCCCCCCC
Confidence            366777777888888888888888888888877776  477777776

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A

Probab=99.02  E-value=7.6e-11  Score=79.41  Aligned_cols=44  Identities=27%  Similarity=0.272  Sum_probs=33.5

Q ss_pred             HHhhcCCCCccccccchhhcCCHHHHHHHHhhccCCCCCccccccc
Q psy8169           8 HIKSHEYVENHMCELCYKVFESRENLMRHLKIHDDKESKRFKCEQC   53 (843)
Q Consensus         8 h~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~C~~C   53 (843)
                      |+++|+++++|.|++|++.|.+...|..|+++|.+  ++||.|+.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~--~k~~~C~~c   46 (46)
T 2ema_A            3 SGSSGTGEKRYKCNECGKVFSRNSQLSQHQKIHTG--EKPSGPSSG   46 (46)
T ss_dssp             SCSSCTTSCCEECSSSCCEESSHHHHHHHHTGGGC--CCCCSSSCC
T ss_pred             CccCCCCCcCcCCCCCcchhCCHHHHHHHHHhcCC--CCCCCCCCC
Confidence            66777777777777777777777777777777776  477777766

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.02  E-value=6.3e-11  Score=79.81  Aligned_cols=45  Identities=27%  Similarity=0.253  Sum_probs=34.3

Q ss_pred             HHHhhcCCCCccccccchhhcCCHHHHHHHHhhccCCCCCccccccc
Q psy8169           7 EHIKSHEYVENHMCELCYKVFESRENLMRHLKIHDDKESKRFKCEQC   53 (843)
Q Consensus         7 ~h~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~C~~C   53 (843)
                      .|+++|+++++|.|++|++.|.+...|..|+++|.+  ++||.|+.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~--~k~~~C~~C   46 (46)
T 2emp_A            2 SSGSSGTGVKPYMCNECGKAFSVYSSLTTHQVIHTG--EKPSGPSSG   46 (46)
T ss_dssp             CCCSCSSCCCSEECSSSCCEESCHHHHHHHHHHHHC--CSCCSCCCC
T ss_pred             CcccccCCCcCeECCCCCchhCCHHHHHHHHHHcCC--CCCCCCCCC
Confidence            366777777788888888888888888888877776  477777776

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.02  E-value=8.2e-11  Score=79.27  Aligned_cols=45  Identities=24%  Similarity=0.259  Sum_probs=34.2

Q ss_pred             HHHhhcCCCCccccccchhhcCCHHHHHHHHhhccCCCCCccccccc
Q psy8169           7 EHIKSHEYVENHMCELCYKVFESRENLMRHLKIHDDKESKRFKCEQC   53 (843)
Q Consensus         7 ~h~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~C~~C   53 (843)
                      .|+++|+++++|.|++|++.|.+...|..|+++|.+  ++||.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~--~~~~~C~~C   46 (46)
T 2ytr_A            2 SSGSSGTGEKPYKCNECGKAFSQTSKLARHQRIHTG--EKPSGPSSG   46 (46)
T ss_dssp             CSSCCCSSCCTTCCTTTCCCCSSHHHHHHHHTTTTT--CSCCCSCCC
T ss_pred             CCCcCCCCCcCcCCCCCCCccCCHHHHHHHHHhcCC--CCCCCCCCC
Confidence            366777777788888888888888888888777776  477777776

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.02  E-value=8.3e-11  Score=79.21  Aligned_cols=44  Identities=23%  Similarity=0.175  Sum_probs=33.7

Q ss_pred             HHhhcCCCCccccccchhhcCCHHHHHHHHhhccCCCCCccccccc
Q psy8169           8 HIKSHEYVENHMCELCYKVFESRENLMRHLKIHDDKESKRFKCEQC   53 (843)
Q Consensus         8 h~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~C~~C   53 (843)
                      |+++|+++++|.|++|++.|.+...|.+|+++|++  ++||.|+.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~--~k~~~C~~C   46 (46)
T 2epz_A            3 SGSSGTGEKPFDCIDCGKAFSDHIGLNQHRRIHTG--EKPSGPSSG   46 (46)
T ss_dssp             CCSSCCCCCSBCCTTTCCCBSSHHHHHHHHTTTTT--CCCCSSCCC
T ss_pred             CCCCcCCCCCeECCCCCceeCCHHHHHHHHHHhCC--CCCCCCCCC
Confidence            66777777778888888888777778778777776  477777776

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.02  E-value=7.8e-11  Score=79.35  Aligned_cols=44  Identities=25%  Similarity=0.212  Sum_probs=35.0

Q ss_pred             HHhhcCCCCccccccchhhcCCHHHHHHHHhhccCCCCCccccccc
Q psy8169           8 HIKSHEYVENHMCELCYKVFESRENLMRHLKIHDDKESKRFKCEQC   53 (843)
Q Consensus         8 h~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~C~~C   53 (843)
                      |+++|+++++|.|++|++.|.+...|..|+++|.+  ++||.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~--~k~~~C~~C   46 (46)
T 2em7_A            3 SGSSGTGEKPYKCEECGKGFICRRDLYTHHMVHTG--EKPSGPSSG   46 (46)
T ss_dssp             CCCSSSCCCSEECSSSCCEESCHHHHHHHGGGGTT--CCCSSTTCC
T ss_pred             CCCCCCCCcCccCCCccchhCCHHHHHHHHHHhCC--CCCCCCCCC
Confidence            67778888888888888888888888888888876  478888776

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A

Probab=99.02  E-value=7.2e-11  Score=79.56  Aligned_cols=45  Identities=22%  Similarity=0.225  Sum_probs=34.2

Q ss_pred             HHHhhcCCCCccccccchhhcCCHHHHHHHHhhccCCCCCccccccc
Q psy8169           7 EHIKSHEYVENHMCELCYKVFESRENLMRHLKIHDDKESKRFKCEQC   53 (843)
Q Consensus         7 ~h~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~C~~C   53 (843)
                      .|+++|+++++|.|++|++.|.+...|..|+++|++  ++||.|+.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~--~k~~~C~~C   46 (46)
T 2el4_A            2 SSGSSGTGVKPYGCSQCAKTFSLKSQLIVHQRSHTG--VKPSGPSSG   46 (46)
T ss_dssp             CCCCCSCCCCSEECSSSSCEESSHHHHHHHGGGSSS--CCCSCCTTC
T ss_pred             ccccCCCCCCceECCCCCchhCCHHHHHHHHHHhCC--CCCCCCCCC
Confidence            366777777788888888888888888888777776  477777776

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.02  E-value=8.7e-11  Score=79.15  Aligned_cols=45  Identities=22%  Similarity=0.241  Sum_probs=33.7

Q ss_pred             HHHhhcCCCCccccccchhhcCCHHHHHHHHhhccCCCCCccccccc
Q psy8169           7 EHIKSHEYVENHMCELCYKVFESRENLMRHLKIHDDKESKRFKCEQC   53 (843)
Q Consensus         7 ~h~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~C~~C   53 (843)
                      .|+++|+++++|.|++|++.|.+...|..|+++|.+  ++||.|+.|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~--~k~~~C~~C   46 (46)
T 2eop_A            2 SSGSSGTGEKPHECRECGKSFSFNSQLIVHQRIHTG--ENPSGPSSG   46 (46)
T ss_dssp             CCCCSCCCCCSCBCTTTCCBCSSHHHHHHHHTTTTT--SCCSCCCCC
T ss_pred             CCccccCCCCCeeCCCCCchhCCHHHHHHHHHHcCC--CCCCCCCCC
Confidence            366777777777777777777777777777777776  477777766

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.02  E-value=9e-11  Score=79.02  Aligned_cols=45  Identities=29%  Similarity=0.338  Sum_probs=33.2

Q ss_pred             HHHhhcCCCCccccccchhhcCCHHHHHHHHhhccCCCCCccccccc
Q psy8169           7 EHIKSHEYVENHMCELCYKVFESRENLMRHLKIHDDKESKRFKCEQC   53 (843)
Q Consensus         7 ~h~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~C~~C   53 (843)
                      .|+++|+++++|.|++|++.|.+...|..|+++|.+  ++||.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~--~k~~~C~~c   46 (46)
T 2ytj_A            2 SSGSSGTGEKPYICAECGKAFTIRSNLIKHQKIHTK--QKPSGPSSG   46 (46)
T ss_dssp             CSSCTTSSCCSEECSSSCCEESSHHHHHHHHHHTSC--CCCSSCSCC
T ss_pred             CcccCCCCCcCeECCCCChhhCCHHHHHHHHHHcCC--CCCCCCCCC
Confidence            366777777777777777777777777777777776  477777765

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.02  E-value=7.3e-11  Score=79.42  Aligned_cols=44  Identities=23%  Similarity=0.311  Sum_probs=31.9

Q ss_pred             HHhhcCCCCccccccchhhcCCHHHHHHHHhhccCCCCCccccccc
Q psy8169           8 HIKSHEYVENHMCELCYKVFESRENLMRHLKIHDDKESKRFKCEQC   53 (843)
Q Consensus         8 h~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~C~~C   53 (843)
                      |+++|+++++|.|++|++.|.+...|..|+++|.+  ++||.|++|
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~--~~~~~C~~C   46 (46)
T 2em5_A            3 SGSSGSSTKSHQCHECGRGFTLKSHLNQHQRIHTG--EKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCSCSEECSSSCCEESSHHHHHHHHTTTSC--SCCSSCCCC
T ss_pred             CcCCCCCCCCeECCcCCCccCCHHHHHHHHHHhCC--CCCCCCCCC
Confidence            56677777777777777777777777777777766  467777766

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.02  E-value=8.4e-11  Score=79.08  Aligned_cols=44  Identities=16%  Similarity=0.163  Sum_probs=34.9

Q ss_pred             HHhhcCCCCccccccchhhcCCHHHHHHHHhhccCCCCCccccccc
Q psy8169           8 HIKSHEYVENHMCELCYKVFESRENLMRHLKIHDDKESKRFKCEQC   53 (843)
Q Consensus         8 h~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~C~~C   53 (843)
                      |+++|+++++|.|++|++.|.+...|.+|+++|.+  ++||.|++|
T Consensus         3 h~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~--~~~~~C~~C   46 (46)
T 2ytm_A            3 SGSSGTGEKPYKCMECGKAFGDNSSCTQHQRLHTG--QRPSGPSSG   46 (46)
T ss_dssp             SCCCCSSCCSSSBTTTTBCCSSHHHHHHHHHHHHS--CCCCCCCCC
T ss_pred             CCcCCCCCCCcCCCCCCchhCCHHHHHHHHHHcCC--CCCCCCCCC
Confidence            66778888888888888888888888888888876  477888776

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.02  E-value=7.2e-11  Score=79.50  Aligned_cols=44  Identities=27%  Similarity=0.254  Sum_probs=33.1

Q ss_pred             HHhhcCCCCccccccchhhcCCHHHHHHHHhhccCCCCCccccccc
Q psy8169           8 HIKSHEYVENHMCELCYKVFESRENLMRHLKIHDDKESKRFKCEQC   53 (843)
Q Consensus         8 h~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~C~~C   53 (843)
                      |+++|+++++|.|++|++.|.+...|..|+++|.+  ++||.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~--~k~~~C~~c   46 (46)
T 2eq0_A            3 SGSSGTGEKPYKCHECGKVFRRNSHLARHQLIHTG--EKPSGPSSG   46 (46)
T ss_dssp             CCCCTTCCCCEECTTTCCEESSHHHHHHHHTTTCC--CCCSCCSCC
T ss_pred             CCcCCCCCCCeECCCCCchhCCHHHHHHHHHHcCC--CCCCCCCCC
Confidence            56777777777777777777777777777777776  477777766

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.02  E-value=9.6e-11  Score=78.89  Aligned_cols=45  Identities=22%  Similarity=0.235  Sum_probs=34.6

Q ss_pred             HHHhhcCCCCccccccchhhcCCHHHHHHHHhhccCCCCCccccccc
Q psy8169           7 EHIKSHEYVENHMCELCYKVFESRENLMRHLKIHDDKESKRFKCEQC   53 (843)
Q Consensus         7 ~h~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~C~~C   53 (843)
                      .|+++|+++++|.|++|++.|.+...|..|+++|.+  ++||.|+.|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~--~~~~~C~~C   46 (46)
T 2en1_A            2 SSGSSGSGEKPFKCEECGKRFTQNSQLHSHQRVHTG--EKPSGPSSG   46 (46)
T ss_dssp             CSTTCCCCCCSEEETTTTEEESSHHHHHHHGGGGSC--CCCSCCCCC
T ss_pred             CcccCCCCCCCeeCCCCCcccCCHHHHHHHHHHcCC--CCCCCCCCC
Confidence            367777888888888888888888888888887776  477877776

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.01  E-value=8.1e-11  Score=79.25  Aligned_cols=44  Identities=25%  Similarity=0.270  Sum_probs=33.7

Q ss_pred             HHhhcCCCCccccccchhhcCCHHHHHHHHhhccCCCCCccccccc
Q psy8169           8 HIKSHEYVENHMCELCYKVFESRENLMRHLKIHDDKESKRFKCEQC   53 (843)
Q Consensus         8 h~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~C~~C   53 (843)
                      |+++|+++++|.|++|++.|.+...|..|+++|.+  ++||.|++|
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~--~~~~~C~~c   46 (46)
T 2ytk_A            3 SGSSGSGEKPYKCNECGKVFTQNSHLTNHWRIHTG--EKPSGPSSG   46 (46)
T ss_dssp             CCCCSSSSCSEECSSSCCEESSHHHHHHHHHHHSS--SSCSSCCCC
T ss_pred             CcccCCCCCCEeCCcCCCccCCHHHHHHHHHHHCC--CCCCCCCCC
Confidence            66777777778888888888777778778777776  477777776

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.01  E-value=9.2e-11  Score=79.03  Aligned_cols=44  Identities=25%  Similarity=0.315  Sum_probs=31.4

Q ss_pred             HHhhcCCCCccccccchhhcCCHHHHHHHHhhccCCCCCccccccc
Q psy8169           8 HIKSHEYVENHMCELCYKVFESRENLMRHLKIHDDKESKRFKCEQC   53 (843)
Q Consensus         8 h~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~C~~C   53 (843)
                      |+++|+++++|.|++|++.|.+...|..|+++|.+  ++||.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~--~~~~~C~~C   46 (46)
T 2eme_A            3 SGSSGSGEKPYVCDYCGKAFGLSAELVRHQRIHTG--EKPSGPSSG   46 (46)
T ss_dssp             CCCTTCCCCSEECSSSCCEESSHHHHHHHHGGGCC--CSCCSSCCC
T ss_pred             CCCCCCCCCCeECCCCChhhCCHHHHHHHHHhcCC--CCCCCCCCC
Confidence            56677777777777777777777777777777766  467777766

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A

Probab=99.01  E-value=6.1e-11  Score=79.83  Aligned_cols=44  Identities=25%  Similarity=0.189  Sum_probs=32.5

Q ss_pred             HHhhcCCCCccccccchhhcCCHHHHHHHHhhccCCCCCccccccc
Q psy8169           8 HIKSHEYVENHMCELCYKVFESRENLMRHLKIHDDKESKRFKCEQC   53 (843)
Q Consensus         8 h~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~C~~C   53 (843)
                      |+++|+++++|.|++|++.|.+...|.+|+++|.+  ++||.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~--~k~~~C~~C   46 (46)
T 2ely_A            3 SGSSGTGEKPFKCVECGKGFSRRSALNVHHKLHTG--EKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCCCSBCCSSSCCCBSSTTHHHHHHHHHSC--CSSCSCCCC
T ss_pred             CCCCCCCCCCcccCccCcccCCHHHHHHHHHHcCC--CCCCCCCCC
Confidence            56777777777777777777777777777777776  467777766

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.01  E-value=6.9e-11  Score=79.58  Aligned_cols=44  Identities=25%  Similarity=0.183  Sum_probs=32.4

Q ss_pred             HHhhcCCCCccccccchhhcCCHHHHHHHHhhccCCCCCccccccc
Q psy8169           8 HIKSHEYVENHMCELCYKVFESRENLMRHLKIHDDKESKRFKCEQC   53 (843)
Q Consensus         8 h~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~C~~C   53 (843)
                      |+++|+++++|.|++|++.|.+...|..|+++|.+  ++||.|+.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~--~k~~~C~~C   46 (46)
T 2eoo_A            3 SGSSGSGERPYGCNECGKNFGRHSHLIEHLKRHFR--EKSSGPSSG   46 (46)
T ss_dssp             CCCCCSCCCCEECSSSCCEESSHHHHHHHHHHHHS--TTSSCCSCC
T ss_pred             CCCCCCCCCCEEccccCcccCCHHHHHHHHHHHcC--CCCCCCCCC
Confidence            66677777777777777777777777777777776  467777766

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.01  E-value=8.7e-11  Score=79.09  Aligned_cols=44  Identities=23%  Similarity=0.242  Sum_probs=31.7

Q ss_pred             HHhhcCCCCccccccchhhcCCHHHHHHHHhhccCCCCCccccccc
Q psy8169           8 HIKSHEYVENHMCELCYKVFESRENLMRHLKIHDDKESKRFKCEQC   53 (843)
Q Consensus         8 h~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~C~~C   53 (843)
                      |+++|+++++|.|++|++.|.+...|..|+++|++  ++||.|+.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~--~k~~~C~~c   46 (46)
T 2ep2_A            3 SGSSGTGEKPYECSICGKSFTKKSQLHVHQQIHTG--EKPSGPSSG   46 (46)
T ss_dssp             SSSCSSCCCSEECSSSCCEESSHHHHHHHHHTTSS--CCSCCSCCC
T ss_pred             CCCCCCCCcCcCCCCCCcccCCHHHHHHHHHHhCC--CCCCCCCCC
Confidence            56677777777777777777777777777777766  467777765

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.01  E-value=8.4e-11  Score=79.17  Aligned_cols=44  Identities=20%  Similarity=0.198  Sum_probs=33.1

Q ss_pred             HHhhcCCCCccccccchhhcCCHHHHHHHHhhccCCCCCccccccc
Q psy8169           8 HIKSHEYVENHMCELCYKVFESRENLMRHLKIHDDKESKRFKCEQC   53 (843)
Q Consensus         8 h~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~C~~C   53 (843)
                      |+++|+++++|.|++|++.|.+...|..|+++|.+  ++||.|+.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~--~~~~~C~~C   46 (46)
T 2ytd_A            3 SGSSGSGEKPYKCSECGKAFHRHTHLNEHRRIHTG--YRPSGPSSG   46 (46)
T ss_dssp             CCCCSCCCCSEECSSSCCEESSHHHHHHHHHHHTC--CCSSCSSCC
T ss_pred             CccccCCCcCeECCCCCCeeCChHHHHHHHHHcCC--CCCCCCCCC
Confidence            66777777777777777777777777777777776  477777766

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.01  E-value=8e-11  Score=79.29  Aligned_cols=45  Identities=24%  Similarity=0.208  Sum_probs=35.2

Q ss_pred             HHHhhcCCCCccccccchhhcCCHHHHHHHHhhccCCCCCccccccc
Q psy8169           7 EHIKSHEYVENHMCELCYKVFESRENLMRHLKIHDDKESKRFKCEQC   53 (843)
Q Consensus         7 ~h~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~C~~C   53 (843)
                      .|+++|+++++|.|++|++.|.+...|..|+++|.+  ++||.|++|
T Consensus         2 ~H~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~--~~~~~C~~C   46 (46)
T 2ysp_A            2 SSGSSGTGEKPYKCEKCGKGYNSKFNLDMHQKVHTG--ERPSGPSSG   46 (46)
T ss_dssp             CCCCCCSSCCSEEETTTTEEESCHHHHHHHHTTSCS--CCSSCCSCC
T ss_pred             CCCcCCCCCCCeECCCCCCccCCHHHHHHHHHhhCC--CCCCCCCCC
Confidence            367778888888888888888888888888888876  477888776

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A

Probab=99.01  E-value=9.1e-11  Score=79.06  Aligned_cols=44  Identities=20%  Similarity=0.212  Sum_probs=33.7

Q ss_pred             HHhhcCCCCccccccchhhcCCHHHHHHHHhhccCCCCCccccccc
Q psy8169           8 HIKSHEYVENHMCELCYKVFESRENLMRHLKIHDDKESKRFKCEQC   53 (843)
Q Consensus         8 h~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~C~~C   53 (843)
                      |+++|+++++|.|++|++.|.+...|..|+++|.+  ++||.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~--~~~~~C~~C   46 (46)
T 2em9_A            3 SGSSGTGEKPYNCKECGKSFRWASCLLKHQRVHSG--EKPSGPSSG   46 (46)
T ss_dssp             SCCSCCCCCSEECSSSCCEESSHHHHHHHGGGGTS--CCCCSTTCC
T ss_pred             CCCCCCCCcCeECCccccccCChHHHHHHHHHhCC--CCCCCCCCC
Confidence            66777777778888888888777888888777776  477777776

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.01  E-value=7.7e-11  Score=79.38  Aligned_cols=44  Identities=30%  Similarity=0.387  Sum_probs=32.6

Q ss_pred             HHhhcCCCCccccccchhhcCCHHHHHHHHhhccCCCCCccccccc
Q psy8169           8 HIKSHEYVENHMCELCYKVFESRENLMRHLKIHDDKESKRFKCEQC   53 (843)
Q Consensus         8 h~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~C~~C   53 (843)
                      |+++|+++++|.|++|++.|.+...|..|+++|.+  ++||.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~--~k~~~C~~c   46 (46)
T 2emh_A            3 SGSSGTGERPYICTVCGKAFTDRSNLIKHQKIHTG--EKPSGPSSG   46 (46)
T ss_dssp             CCCSCSCCCSEECTTTCCEESSHHHHHHHHHHHHC--SSCSSSCCC
T ss_pred             CCCCCCCCCCcCCCCCCchhCCHHHHHHHHHhcCC--CCCCCCCCC
Confidence            66777777777777777777777777777777776  467777766

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.00  E-value=9.1e-11  Score=79.00  Aligned_cols=44  Identities=20%  Similarity=0.164  Sum_probs=34.1

Q ss_pred             HHhhcCCCCccccccchhhcCCHHHHHHHHhhccCCCCCccccccc
Q psy8169           8 HIKSHEYVENHMCELCYKVFESRENLMRHLKIHDDKESKRFKCEQC   53 (843)
Q Consensus         8 h~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~C~~C   53 (843)
                      |+++|+++++|.|++|++.|.+...|..|+++|.+  ++||.|++|
T Consensus         3 h~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~--~k~~~C~~C   46 (46)
T 2en6_A            3 SGSSGSGEKPYGCNECGKTFSQKSILSAHQRTHTG--EKPSGPSSG   46 (46)
T ss_dssp             CSCCCCSSCCEEETTTTEEESSHHHHHHHHHHHSS--CCCSSSCCC
T ss_pred             CCCccCCCcCeECCCCCcccCchHHHHHHHHHcCC--CCCCCCCCC
Confidence            66777778888888888888888888888877776  477777776

>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.00  E-value=9.5e-11  Score=78.95  Aligned_cols=44  Identities=23%  Similarity=0.178  Sum_probs=32.8

Q ss_pred             HHhhcCCCCccccccchhhcCCHHHHHHHHhhccCCCCCccccccc
Q psy8169           8 HIKSHEYVENHMCELCYKVFESRENLMRHLKIHDDKESKRFKCEQC   53 (843)
Q Consensus         8 h~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~C~~C   53 (843)
                      |+++|+++++|.|++|++.|.+...|..|+++|++  ++||.|+.|
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~--~k~~~C~~C   46 (46)
T 2en8_A            3 SGSSGSGEKSHTCDECGKNFCYISALRIHQRVHMG--EKCSGPSSG   46 (46)
T ss_dssp             CCCCCCCCSSEECTTTCCEESSHHHHHHHHTTTCC--SCSSCCSCC
T ss_pred             ccccCCCCCCeECCCcCcccCCHHHHHHHHHHhCC--CCCCCCCCC
Confidence            66777777777777777777777777777777776  467777766

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.00  E-value=1.1e-10  Score=78.56  Aligned_cols=44  Identities=20%  Similarity=0.153  Sum_probs=33.8

Q ss_pred             HHhhcCCCCccccccchhhcCCHHHHHHHHhhccCCCCCccccccc
Q psy8169           8 HIKSHEYVENHMCELCYKVFESRENLMRHLKIHDDKESKRFKCEQC   53 (843)
Q Consensus         8 h~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~C~~C   53 (843)
                      |+++|+++++|.|++|++.|.+...|..|+++|++  ++||.|++|
T Consensus         3 h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~--~~~~~C~~C   46 (46)
T 2enc_A            3 SGSSGSGEKPFKCEECGKGFYTNSQCYSHQRSHSG--EKPSGPSSG   46 (46)
T ss_dssp             CSSCCCCCCSEECSSSCCEESSHHHHHHHHHHSCC--SSCCSSCCC
T ss_pred             CCCCCCCCCCcCCCCCCCcCCChHHHHHHHHHhCC--CCCCCCCCC
Confidence            56777777788888888888888888888877776  477777776

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens}

Probab=98.99  E-value=1.3e-10  Score=78.23  Aligned_cols=44  Identities=23%  Similarity=0.266  Sum_probs=34.4

Q ss_pred             HHhhcCCCCccccccchhhcCCHHHHHHHHhhccCCCCCccccccc
Q psy8169           8 HIKSHEYVENHMCELCYKVFESRENLMRHLKIHDDKESKRFKCEQC   53 (843)
Q Consensus         8 h~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~C~~C   53 (843)
                      |+++|+++++|.|++|++.|.+...|..|+++|.+  ++||.|++|
T Consensus         3 h~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~--~~~~~C~~C   46 (46)
T 2el6_A            3 SGSSGAGVNPYKCSQCEKSFSGKLRLLVHQRMHTR--EKPSGPSSG   46 (46)
T ss_dssp             SCCSSCCCCSEECSSSSCEESSHHHHHHHHGGGCC--SSCCSCCCC
T ss_pred             CCCCCCCCCCeECCCCCcccCCHHHHHHHHHHcCC--CCCCCCCCC
Confidence            56778888888888888888888888888888876  477888776

>2yso_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.99  E-value=1.2e-10  Score=78.46  Aligned_cols=44  Identities=20%  Similarity=0.243  Sum_probs=33.0

Q ss_pred             HHhhcCCCCccccccchhhcCCHHHHHHHHhhccCCCCCccccccc
Q psy8169           8 HIKSHEYVENHMCELCYKVFESRENLMRHLKIHDDKESKRFKCEQC   53 (843)
Q Consensus         8 h~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~C~~C   53 (843)
                      |+++|+++++|.|++|++.|.+...|..|+++|.+  ++||.|+.|
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~--~k~~~C~~C   46 (46)
T 2yso_A            3 SGSSGSREKSHQCRECGEIFFQYVSLIEHQVLHMG--QKNSGPSSG   46 (46)
T ss_dssp             CSCCSSCCCCEECTTTCCEESSHHHHHHHHHHHSC--CSCCCTTCC
T ss_pred             cccccCCCCCEEccccChhhCCHHHHHHHHHHhCC--CCCCCCCCC
Confidence            56777777777777777777777777777777776  477777766

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.98  E-value=9.3e-11  Score=78.99  Aligned_cols=44  Identities=23%  Similarity=0.201  Sum_probs=30.9

Q ss_pred             HHhhcCCCCccccccchhhcCCHHHHHHHHhhccCCCCCccccccc
Q psy8169           8 HIKSHEYVENHMCELCYKVFESRENLMRHLKIHDDKESKRFKCEQC   53 (843)
Q Consensus         8 h~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~C~~C   53 (843)
                      |+++|+++++|.|++|++.|.+...|..|+++|.+  ++||.|+.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~--~k~~~C~~C   46 (46)
T 2epw_A            3 SGSSGTGEKPCKCTECGKAFCWKSQLIMHQRTHVD--DKHSGPSSG   46 (46)
T ss_dssp             CCCCCCCCCSEECSSSCCEESSSHHHHHHHHHCCS--CCCSCCCCC
T ss_pred             CcccCCCCCCeeCCCCCCccCCHHHHHHHHHHhCC--CCCCCCCCC
Confidence            56667777777777777777777777777777766  467777665

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.98  E-value=7.1e-11  Score=79.54  Aligned_cols=44  Identities=25%  Similarity=0.283  Sum_probs=32.3

Q ss_pred             HHhhcCCCCccccccchhhcCCHHHHHHHHhhccCCCCCccccccc
Q psy8169           8 HIKSHEYVENHMCELCYKVFESRENLMRHLKIHDDKESKRFKCEQC   53 (843)
Q Consensus         8 h~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~C~~C   53 (843)
                      |+++|+++++|.|++|++.|.+...|..|+++|.+  ++||.|+.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~--~~~~~C~~C   46 (46)
T 2yu8_A            3 SGSSGTGEKPYKCNECGKVFTQNSHLARHRRVHTG--GKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCCSSEECSSSCCEESSSHHHHHHTHHHHS--CCCSCSCCC
T ss_pred             cCcCCCCCCCeECCcCCchhCCHHHHHHHHHhcCC--CCCCCCCCC
Confidence            56677777777777777777777777777777776  467777766

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.97  E-value=7.2e-11  Score=79.51  Aligned_cols=44  Identities=20%  Similarity=0.243  Sum_probs=29.9

Q ss_pred             HHhhcCCCCccccccchhhcCCHHHHHHHHhhccCCCCCccccccc
Q psy8169           8 HIKSHEYVENHMCELCYKVFESRENLMRHLKIHDDKESKRFKCEQC   53 (843)
Q Consensus         8 h~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~C~~C   53 (843)
                      |+++|+++++|.|++|++.|.+...|..|+++|.+  ++||.|++|
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~--~k~~~C~~C   46 (46)
T 2ytg_A            3 SGSSGTGEKPFKCGECGKSYNQRVHLTQHQRVHTG--EKPSGPSSG   46 (46)
T ss_dssp             CCCCCSSCCSEECTTTCCEESSSHHHHTTGGGGSS--CCSSCSCCC
T ss_pred             CCCCCCCCCCeECCCCCcccCCHHHHHHHHHHcCC--CCCCCCCCC
Confidence            56666667777777777777777777777766665  366666665

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.97  E-value=1.4e-10  Score=78.07  Aligned_cols=44  Identities=30%  Similarity=0.299  Sum_probs=32.2

Q ss_pred             HHhhcCCCCccccccchhhcCCHHHHHHHHhhccCCCCCccccccc
Q psy8169           8 HIKSHEYVENHMCELCYKVFESRENLMRHLKIHDDKESKRFKCEQC   53 (843)
Q Consensus         8 h~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~C~~C   53 (843)
                      |+++|+++++|.|++|++.|.+...|..|+++|.+  ++||.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~--~~~~~C~~~   46 (46)
T 2ep3_A            3 SGSSGTGEKPYRCAECGKAFTDRSNLFTHQKIHTG--EKPSGPSSG   46 (46)
T ss_dssp             CCSSSSCCCSEECSSSCCEESSHHHHHHHHTTTTT--SCCCCTTCC
T ss_pred             CCCCCCCCCCeECCCCCchhCCHHHHHHHHHHcCC--CCCCCCCCC
Confidence            66777777777777777777777777777777776  467777654

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.97  E-value=1.2e-10  Score=78.28  Aligned_cols=44  Identities=20%  Similarity=0.141  Sum_probs=33.4

Q ss_pred             HHhhcCCCCccccccchhhcCCHHHHHHHHhhccCCCCCccccccc
Q psy8169           8 HIKSHEYVENHMCELCYKVFESRENLMRHLKIHDDKESKRFKCEQC   53 (843)
Q Consensus         8 h~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~C~~C   53 (843)
                      |+++|.++++|.|++|++.|.+...|..|+++|.+  ++||.|++|
T Consensus         3 h~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~--~~~~~C~~C   46 (46)
T 2em8_A            3 SGSSGSGEKPYKCVECGKGYKRRLDLDFHQRVHTG--EKLSGPSSG   46 (46)
T ss_dssp             CCCCCCSCCSEECSSSCCEESSHHHHHHHHHHHHC--CCCCCSCCC
T ss_pred             CCCCCCCCCCeECcccCchhCCHHHHHHHHHHHcC--CCCCCCCCC
Confidence            56677777777777777777777777777777776  477777776

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.97  E-value=3.9e-11  Score=90.92  Aligned_cols=63  Identities=21%  Similarity=0.254  Sum_probs=39.9

Q ss_pred             hhhhhhhccccCCCCCCccchhhcccccccccccccccccchhhhhhhHHHHhhhhhhhcCCCCC
Q psy8169         677 SLKKHIRIFHTQNQPQHTNVIEVALGARANAAFIDRIRCELCDKSFTRKDSLKKHNRIFHGGADP  741 (843)
Q Consensus       677 ~L~~H~~~~H~~~~p~~~~~~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~  741 (843)
                      .|..|++. |.+++|+.|..|++.|.....+...++|+|++|++.|.+...|..|++.|++ +++
T Consensus         5 ~l~~H~~~-h~~~~~~~C~~C~k~f~~~~~l~~~~~~~C~~C~~~f~~~~~l~~H~~~H~~-~~~   67 (73)
T 2ctu_A            5 SSGKRQKI-HLGDRSQKCSKCGIIFIRRSTLSRRKTPMCEKCRKDSCQEAALNKDEGNESG-KKT   67 (73)
T ss_dssp             SCCCCCCC-CCCCSEEECSSSCCEEECCCCCCCSSSCCCHHHHHTCSCCCSSCCCSSCCCC-CCC
T ss_pred             hHHHHHHH-hCCCCCeeCCcccchhCCHHHhCcCCCCCCCCCChhhcCHHHHHHHHHhhcC-CCC
Confidence            34444443 4444444444444444333333223449999999999999999999999665 777

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.95  E-value=2.1e-10  Score=77.65  Aligned_cols=44  Identities=23%  Similarity=0.209  Sum_probs=32.3

Q ss_pred             HHhhcCCCCccccccchhhcCCHHHHHHHHh-hccCCCCCccccccc
Q psy8169           8 HIKSHEYVENHMCELCYKVFESRENLMRHLK-IHDDKESKRFKCEQC   53 (843)
Q Consensus         8 h~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~-~h~~~~~~~~~C~~C   53 (843)
                      |+++|+++++|.|++|++.|.+...|..|++ +|.+  ++||.|+.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~~H~~--~k~~~C~~C   47 (47)
T 2epx_A            3 SGSSGTGKKPYECIECGKAFIQNTSLIRHWRYYHTG--EKPSGPSSG   47 (47)
T ss_dssp             CCCCCCCCCSBCCSSSCCCBSSHHHHHHHHTTTTTT--SCSSSCCCC
T ss_pred             cccccCCCCCEECCccCchhCChHHHHHHhHhhcCC--CCCCCCCCC
Confidence            5677777777777777777777777777777 7766  467777766

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.94  E-value=3.5e-10  Score=78.98  Aligned_cols=46  Identities=26%  Similarity=0.425  Sum_probs=26.9

Q ss_pred             cCCCCccccccchhhcCCHHHHHHHHh-hccCCCCCcccccccccccCC
Q psy8169          12 HEYVENHMCELCYKVFESRENLMRHLK-IHDDKESKRFKCEQCDKRFSS   59 (843)
Q Consensus        12 h~~~~~~~C~~C~~~f~~~~~l~~H~~-~h~~~~~~~~~C~~C~~~f~~   59 (843)
                      |.++++|.|++|++.|.....|.+|++ +|.+  ++||.|++|++.|.+
T Consensus         7 ~~~~k~~~C~~C~k~f~~~~~L~~H~~~~H~~--~k~~~C~~C~k~F~~   53 (54)
T 2eps_A            7 GSVGKPYICQSCGKGFSRPDHLNGHIKQVHTS--ERPHKCQVWVSGPSS   53 (54)
T ss_dssp             CCSSCCEECSSSCCEESSHHHHHHHHHHTSCC--CCCCCSSSSCCSSCC
T ss_pred             CCCCCCeECCCCCcccCCHHHHHHHHHHhcCC--CCCccCCCCCCCCCC
Confidence            455556666666666666666666654 5554  355666666665553

>2eod_A TNF receptor-associated factor 4; zinc binding, NF-KB, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.94  E-value=2.7e-10  Score=83.71  Aligned_cols=59  Identities=17%  Similarity=0.212  Sum_probs=44.7

Q ss_pred             cCCCCccccccchhhcCCHHHHHHHHhhccCCCCCccccc-ccccccCCHHHHHHhHHhhccCCC
Q psy8169          12 HEYVENHMCELCYKVFESRENLMRHLKIHDDKESKRFKCE-QCDKRFSSNAELNKHSSAIHQRLK   75 (843)
Q Consensus        12 h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~C~-~C~~~f~~~~~l~~H~~~~h~~~~   75 (843)
                      .-+.++|.|++|++.|. ...|..|+++ .+  ++||.|+ .|++.|.....|..|+ ++|.+..
T Consensus         5 ~C~~~~~~C~~C~k~f~-~~~L~~H~~~-~~--~~p~~C~~~C~k~f~~~~~L~~H~-~~hc~~~   64 (66)
T 2eod_A            5 SSGKRTQPCTYCTKEFV-FDTIQSHQYQ-CP--RLPVACPNQCGVGTVAREDLPGHL-KDSCNTA   64 (66)
T ss_dssp             CCCCCEEECSSSCCEEE-HHHHHHHHHH-CS--SSEEECTTCCSCCEEETTTHHHHH-HTTSSSC
T ss_pred             cCCCCCeeccccCCccC-HHHHHHHHHH-cC--CcCccCCcccCcccccHHHHHHHH-HhhcccC
Confidence            34677888888888888 8888888877 55  5788888 8888888888888887 5565543

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.93  E-value=2.5e-10  Score=76.77  Aligned_cols=44  Identities=25%  Similarity=0.276  Sum_probs=33.6

Q ss_pred             HHhhcCCCCccccccchhhcCCHHHHHHHHhhccCCCCCccccccc
Q psy8169           8 HIKSHEYVENHMCELCYKVFESRENLMRHLKIHDDKESKRFKCEQC   53 (843)
Q Consensus         8 h~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~C~~C   53 (843)
                      |+++|+++++|.|++|++.|.+...|..|+++|.+  ++||.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~--~k~~~C~~~   46 (46)
T 2em2_A            3 SGSSGSGEKPFKCKECGKAFRQNIHLASHLRIHTG--EKPSGPSSG   46 (46)
T ss_dssp             CCCSCCCCCSEECSSSCCEESSHHHHHHHHHHHCC--CCSSCSSCC
T ss_pred             CCCCCCCCCCEECCcCCchhCCHHHHHHHHHHhCC--CCCCCCCCC
Confidence            66777777888888888888888888888877776  477777764

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=98.93  E-value=8.1e-10  Score=88.64  Aligned_cols=59  Identities=25%  Similarity=0.389  Sum_probs=33.2

Q ss_pred             cccccccccccCHHHHHHHHhh-cCCCc---------ccccchhHhhcCHHHHHHHHhhccCccccCccccC
Q psy8169         155 FECYVCSKVLATSHSLKRHLLI-HNGPK---------YTCEICAKEFTRVYELNIHKKLHEDESVANQLKCE  216 (843)
Q Consensus       155 ~~C~~C~~~f~~~~~l~~H~~~-h~~~~---------~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~~C~  216 (843)
                      |.|..|++.|.+...|..|+++ |.+.+         |.|.+|++.|.....|..|+++|+++   ++|.|+
T Consensus        26 ~~C~~C~k~f~~~~~L~~H~~~~H~~~~~~~~~~c~~~~C~~C~k~f~~~~~L~~H~~~H~~~---k~~~C~   94 (95)
T 2ej4_A           26 RPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVHTGE---KSGPSS   94 (95)
T ss_dssp             SSCCCCCCCCSSHHHHHHHHHHTTTCCTTCSCCCCCCTTCSSTTCCCSSHHHHHHHHHHHHTC---CCCSSC
T ss_pred             CcccccccccCCHHHHHHHHHHhccCCCCCCccceeccCCCCCCcccCCHHHHHHHHHhcCCC---CCCCCC
Confidence            4455555555555555555544 44332         56666666666666666666666665   566664

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A

Probab=98.89  E-value=4.9e-10  Score=73.61  Aligned_cols=42  Identities=17%  Similarity=0.273  Sum_probs=32.3

Q ss_pred             HHhhcCCCCccccccchhhcCCHHHHHHHHhhccCCCCCccccc
Q psy8169           8 HIKSHEYVENHMCELCYKVFESRENLMRHLKIHDDKESKRFKCE   51 (843)
Q Consensus         8 h~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~C~   51 (843)
                      |+++|+++++|.|++|++.|.+...|..|+++|.+  ++||.|+
T Consensus         1 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~--~~~~~C~   42 (42)
T 2el5_A            1 GSSGSSGENPYECSECGKAFNRKDQLISHQRTHAG--ESGPSSG   42 (42)
T ss_dssp             CCSSSSSCCSEECSSSCCEESSHHHHHHHHGGGCC--CCSCCCC
T ss_pred             CCCCCCCCCCccCCCcChhhCCHHHHHHHHHhcCC--CCCCCCC
Confidence            56777888888888888888888888888888876  4777774

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A

Probab=98.88  E-value=4.9e-10  Score=75.30  Aligned_cols=45  Identities=22%  Similarity=0.352  Sum_probs=41.6

Q ss_pred             HHHhhccCCCCCcccccccccccCCHHHHHHhHHhhccCCCceeCCCC
Q psy8169          35 RHLKIHDDKESKRFKCEQCDKRFSSNAELNKHSSAIHQRLKLHECDLC   82 (843)
Q Consensus        35 ~H~~~h~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~C~~C   82 (843)
                      +|+++|.+  ++||.|+.|++.|.+...|..|+ ..|.+++||.|+.|
T Consensus         2 ~H~~~H~~--~k~~~C~~C~k~F~~~~~L~~H~-~~H~~~k~~~C~~C   46 (46)
T 2emk_A            2 SSGSSGTG--EKPYECKECGKAFSQTTHLIQHQ-RVHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCSS--SCSCBCSSSCCBCSCHHHHHHHH-HHHSSCCCSSCCCC
T ss_pred             CCCCccCC--CCceECCCCCchhCCHHHHHHHH-HHcCCCCCCCCCCC
Confidence            58889988  59999999999999999999998 67999999999987

>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.88  E-value=6.7e-10  Score=72.98  Aligned_cols=42  Identities=17%  Similarity=0.253  Sum_probs=32.0

Q ss_pred             HHhhcCCCCccccccchhhcCCHHHHHHHHhhccCCCCCccccc
Q psy8169           8 HIKSHEYVENHMCELCYKVFESRENLMRHLKIHDDKESKRFKCE   51 (843)
Q Consensus         8 h~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~C~   51 (843)
                      |+++|+++++|.|++|++.|.+...|.+|+++|.+  ++||.|.
T Consensus         1 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~--~~~~~C~   42 (42)
T 2yte_A            1 GSSGSSGEKPYSCAECKETFSDNNRLVQHQKMHTV--KSGPSSG   42 (42)
T ss_dssp             CCSSSCSCCSCBCTTTCCBCSSHHHHHHHHHHTSC--CSSCCCC
T ss_pred             CCcCcCCCCCeECCCCCCccCCHHHHHHHHHHhCC--CCCCCCC
Confidence            56677778888888888888888888888887776  4777774

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.88  E-value=5.1e-10  Score=75.28  Aligned_cols=45  Identities=24%  Similarity=0.326  Sum_probs=41.7

Q ss_pred             HHHhhccCCCCCcccccccccccCCHHHHHHhHHhhccCCCceeCCCC
Q psy8169          35 RHLKIHDDKESKRFKCEQCDKRFSSNAELNKHSSAIHQRLKLHECDLC   82 (843)
Q Consensus        35 ~H~~~h~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~C~~C   82 (843)
                      +|+++|.+  ++||.|+.|++.|.+...|..|+ ..|.+++||.|++|
T Consensus         2 ~H~~~H~~--~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~~~~~C~~C   46 (46)
T 2eml_A            2 SSGSSGTG--EKPYECSVCGKAFSHRQSLSVHQ-RIHSGKKPSGPSSG   46 (46)
T ss_dssp             CCCCCCSS--CCSEECSSSCCEESSHHHHHHHH-GGGSSCCCSCSSCC
T ss_pred             CccCCcCC--CCCeeCCCcCCccCCHHHHHHHH-HHhcCCCCCCCCCC
Confidence            48889988  59999999999999999999998 77999999999988

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.88  E-value=6.5e-10  Score=74.74  Aligned_cols=44  Identities=23%  Similarity=0.266  Sum_probs=34.0

Q ss_pred             HHHhhcCCCCccccccchhhcCCHHHHHHHHhhccCCCCCcccccc
Q psy8169           7 EHIKSHEYVENHMCELCYKVFESRENLMRHLKIHDDKESKRFKCEQ   52 (843)
Q Consensus         7 ~h~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~C~~   52 (843)
                      .|+++|+++++|.|++|++.|.+...|..|+++|.+  ++||.|+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~--~k~~~C~~   45 (46)
T 2eq2_A            2 SSGSSGTGGKPYQCNECGKAFSQTSKLARHQRVHTG--EKPSGPSS   45 (46)
T ss_dssp             CCCCSSSSSCSSSCCSSCCCCSSHHHHHHHGGGGCC--CCCCCCCC
T ss_pred             CcccccCCCCCeECCCCCcccCCHHHHHHHHHHcCC--CCCCCCCC
Confidence            367778888888888888888888888888888876  47787763

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.88  E-value=5.5e-10  Score=75.04  Aligned_cols=42  Identities=21%  Similarity=0.216  Sum_probs=31.4

Q ss_pred             HHhhcCCCCccccccchhhcCCHHHHHHHHhhccCCCCCccccc
Q psy8169           8 HIKSHEYVENHMCELCYKVFESRENLMRHLKIHDDKESKRFKCE   51 (843)
Q Consensus         8 h~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~C~   51 (843)
                      |+++|+++++|.|++|++.|.....|..|+++|.+  ++||.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~--~k~~~C~   44 (46)
T 2em4_A            3 SGSSGTGQRPYECIECGKAFKTKSSLICHRRSHTG--EKPSGPS   44 (46)
T ss_dssp             SCCCCCCSSSEECSSSCCEESSHHHHHHHHHHHSS--SSCCCCC
T ss_pred             CccccCCCcCcCCCCCCCccCCHHHHHHHHHhcCC--CCCCCCC
Confidence            66777777777777777777777777777777776  4777775

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A

Probab=98.88  E-value=5.3e-10  Score=75.14  Aligned_cols=44  Identities=23%  Similarity=0.224  Sum_probs=33.5

Q ss_pred             HHHhhcCCCCccccccchhhcCCHHHHHHHHhhccCCCCCcccccc
Q psy8169           7 EHIKSHEYVENHMCELCYKVFESRENLMRHLKIHDDKESKRFKCEQ   52 (843)
Q Consensus         7 ~h~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~C~~   52 (843)
                      .|+++|+++++|.|++|++.|.+...|..|+++|.+  ++||.|++
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~--~k~~~C~~   45 (46)
T 2emj_A            2 SSGSSGTGEKPFECAECGKSFSISSQLATHQRIHTG--EKPSGPSS   45 (46)
T ss_dssp             CCCCCCCCCCSEECSSSSCEESSHHHHHHHHHHHTT--SCSSSSCC
T ss_pred             CCCCCCCCCCCEECCCCCcccCCHHHHHHHHHHhCC--CCCCCCCC
Confidence            367778888888888888888888888888888776  47777763

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.87  E-value=6.2e-10  Score=74.82  Aligned_cols=43  Identities=28%  Similarity=0.299  Sum_probs=32.2

Q ss_pred             HHhhcCCCCccccccchhhcCCHHHHHHHHhhccCCCCCcccccc
Q psy8169           8 HIKSHEYVENHMCELCYKVFESRENLMRHLKIHDDKESKRFKCEQ   52 (843)
Q Consensus         8 h~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~C~~   52 (843)
                      |+++|+++++|.|++|++.|.+...|..|+++|.+  ++||.|+.
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~--~k~~~C~~   45 (46)
T 2enf_A            3 SGSSGTGEKPYKCNECGKVFTQNSHLVRHRGIHTG--EKPSGPSS   45 (46)
T ss_dssp             CCCCCCCCCSCBCSSSCCBCSSHHHHHHHHTTTTT--SSCCCCSC
T ss_pred             CCcCCCCCcCeECCCCCcccCCHHHHHHHHHhhCC--CCCCCCCC
Confidence            66777777777777777777777777777777776  47777753

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.87  E-value=8e-10  Score=74.31  Aligned_cols=45  Identities=24%  Similarity=0.316  Sum_probs=41.6

Q ss_pred             HHHhhccCCCCCcccccccccccCCHHHHHHhHHhhccCCCceeCCCC
Q psy8169          35 RHLKIHDDKESKRFKCEQCDKRFSSNAELNKHSSAIHQRLKLHECDLC   82 (843)
Q Consensus        35 ~H~~~h~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~C~~C   82 (843)
                      +|+++|.+  ++||.|+.|++.|.+...|..|+ ..|.+++||.|+.|
T Consensus         2 ~H~~~H~~--~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~~~~~C~~C   46 (46)
T 2eq4_A            2 SSGSSGTG--EKLYNCKECGKSFSRAPCLLKHE-RLHSGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSSC--CCCCCBTTTTBCCSCHHHHHHHH-HHCCSSSCCCCCCC
T ss_pred             CCcccCCC--CCCeECCCCCCccCchHHHHHHH-HhcCCCCCCCCCCC
Confidence            48889988  59999999999999999999998 67999999999988

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.87  E-value=5.3e-10  Score=75.17  Aligned_cols=43  Identities=23%  Similarity=0.255  Sum_probs=33.2

Q ss_pred             HhhcCCCCccccccchhhcCCHHHHHHHHhhccCCCCCccccccc
Q psy8169           9 IKSHEYVENHMCELCYKVFESRENLMRHLKIHDDKESKRFKCEQC   53 (843)
Q Consensus         9 ~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~C~~C   53 (843)
                      +++|+++++|.|++|++.|.+...|..|+++|.+  ++||.|++|
T Consensus         4 ~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~--~k~~~C~~C   46 (46)
T 2ep0_A            4 GSSGTGEKPYKCDVCHKSFRYGSSLTVHQRIHTG--EKPSGPSSG   46 (46)
T ss_dssp             CCSSTTCCSEECSSSCCEESSHHHHHHHHTTTSS--SCCCSCCCC
T ss_pred             CCCCCCCCCeeCcccCcccCChHHHHHHHHHhCC--CCCCCCCCC
Confidence            5677778888888888888888888888887776  477887776

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.87  E-value=5.9e-10  Score=74.97  Aligned_cols=45  Identities=20%  Similarity=0.297  Sum_probs=41.6

Q ss_pred             HHHhhccCCCCCcccccccccccCCHHHHHHhHHhhccCCCceeCCCC
Q psy8169          35 RHLKIHDDKESKRFKCEQCDKRFSSNAELNKHSSAIHQRLKLHECDLC   82 (843)
Q Consensus        35 ~H~~~h~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~C~~C   82 (843)
                      +|+++|.+  ++||.|+.|++.|.+...|..|+ ..|.+++||.|++|
T Consensus         2 ~H~~~H~~--~~~~~C~~C~k~f~~~~~L~~H~-~~H~~~~~~~C~~C   46 (46)
T 2eov_A            2 SSGSSGTG--EKPYKCSDCGKSFTWKSRLRIHQ-KCHTGERHSGPSSG   46 (46)
T ss_dssp             CCCCCCSS--CCSCBCSSSCCBCSSHHHHHHHH-HHHSCCSSCCSCCC
T ss_pred             CCCCCCCC--CCCccCCccChhhCCHHHHHHHH-HhcCCCCCCCCCCC
Confidence            58889987  58999999999999999999998 77999999999988

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.87  E-value=7.3e-10  Score=74.51  Aligned_cols=44  Identities=20%  Similarity=0.178  Sum_probs=33.4

Q ss_pred             HHHhhcCCCCccccccchhhcCCHHHHHHHHhhccCCCCCcccccc
Q psy8169           7 EHIKSHEYVENHMCELCYKVFESRENLMRHLKIHDDKESKRFKCEQ   52 (843)
Q Consensus         7 ~h~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~C~~   52 (843)
                      .|+++|+++++|.|++|++.|.+...|..|+++|.+  ++||.|+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~--~k~~~C~~   45 (46)
T 2ep1_A            2 SSGSSGTGEKPYECSDCGKSFIKKSQLHVHQRIHTG--ENPSGPSS   45 (46)
T ss_dssp             CCCCCCSSCCSSCCSSSCCCCSSHHHHHHHHGGGSS--SCCCSSSC
T ss_pred             ccccCCCCCCCcCCCCCCchhCCHHHHHHHHHHhCC--CCCCCCCC
Confidence            366777788888888888888888888888888776  47777763

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.87  E-value=6.9e-10  Score=74.61  Aligned_cols=43  Identities=28%  Similarity=0.357  Sum_probs=32.6

Q ss_pred             HHHhhcCCCCccccccchhhcCCHHHHHHHHhhccCCCCCccccc
Q psy8169           7 EHIKSHEYVENHMCELCYKVFESRENLMRHLKIHDDKESKRFKCE   51 (843)
Q Consensus         7 ~h~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~C~   51 (843)
                      .|+++|+++++|.|++|++.|.+...|..|+++|.+  ++||.|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~--~~~~~C~   44 (46)
T 2emg_A            2 SSGSSGTGENPFICSECGKVFTHKTNLIIHQKIHTG--ERPSGPS   44 (46)
T ss_dssp             CCCCCCCSCCSCBCTTTCCBCSSHHHHHHHHTTTSC--CCCSCSC
T ss_pred             CCCCCCCCCCCEECCccCcccCCHHHHHHHHHHhCC--CCCCCCC
Confidence            366777777778888888888888888888777776  4777775

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.87  E-value=6.7e-10  Score=73.81  Aligned_cols=44  Identities=27%  Similarity=0.296  Sum_probs=40.6

Q ss_pred             HHhhccCCCCCcccccccccccCCHHHHHHhHHhhccCCCceeCCCC
Q psy8169          36 HLKIHDDKESKRFKCEQCDKRFSSNAELNKHSSAIHQRLKLHECDLC   82 (843)
Q Consensus        36 H~~~h~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~C~~C   82 (843)
                      |+++|.+  ++||.|+.|++.|.+...|..|+ ..|.+++||.|+.|
T Consensus         1 H~~~H~~--~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~~~~~C~~C   44 (44)
T 2emx_A            1 GSSGSSG--EKPFGCSCCEKAFSSKSYLLVHQ-QTHAEEKPSGPSSG   44 (44)
T ss_dssp             CCCCCSS--CCCEECSSSSCEESSHHHHHHHH-HHHTSSCSCSCCCC
T ss_pred             CCCCcCC--CcCccCCCCCcccCCHHHHHHHH-HHhCCCCCCCCCCC
Confidence            6788887  58999999999999999999998 67999999999987

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.87  E-value=5.9e-10  Score=74.98  Aligned_cols=43  Identities=23%  Similarity=0.222  Sum_probs=32.0

Q ss_pred             HHhhcCCCCccccccchhhcCCHHHHHHHHhhccCCCCCcccccc
Q psy8169           8 HIKSHEYVENHMCELCYKVFESRENLMRHLKIHDDKESKRFKCEQ   52 (843)
Q Consensus         8 h~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~C~~   52 (843)
                      |+++|+++++|.|++|++.|.+...|..|+++|.+  ++||.|+.
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~--~k~~~C~~   45 (46)
T 2eow_A            3 SGSSGTGEKPYKCNECGKAFRARSSLAIHQATHSG--EKPSGPSS   45 (46)
T ss_dssp             CCCCSCCCCCEECTTSCCEESSHHHHHHHHHHHCC--CSCSCTTC
T ss_pred             ccCCCCCCCCeeccccCChhcCHHHHHHHHHHcCC--CCCCCCCC
Confidence            66777777777777777777777777777777776  47777753

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.87  E-value=5.1e-10  Score=75.19  Aligned_cols=45  Identities=22%  Similarity=0.363  Sum_probs=41.7

Q ss_pred             HHHhhccCCCCCcccccccccccCCHHHHHHhHHhhccCCCceeCCCC
Q psy8169          35 RHLKIHDDKESKRFKCEQCDKRFSSNAELNKHSSAIHQRLKLHECDLC   82 (843)
Q Consensus        35 ~H~~~h~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~C~~C   82 (843)
                      +|+++|.+  ++||.|++|++.|.+...|..|+ ..|.+++||.|++|
T Consensus         2 ~H~~~H~~--~~~~~C~~C~k~f~~~~~L~~H~-~~H~~~~~~~C~~C   46 (46)
T 2em5_A            2 SSGSSGSS--TKSHQCHECGRGFTLKSHLNQHQ-RIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCC--SCSEECSSSCCEESSHHHHHHHH-TTTSCSCCSSCCCC
T ss_pred             CCcCCCCC--CCCeECCcCCCccCCHHHHHHHH-HHhCCCCCCCCCCC
Confidence            58889988  59999999999999999999998 77999999999988

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.86  E-value=7.4e-10  Score=74.43  Aligned_cols=45  Identities=27%  Similarity=0.381  Sum_probs=41.6

Q ss_pred             HHHhhccCCCCCcccccccccccCCHHHHHHhHHhhccCCCceeCCCC
Q psy8169          35 RHLKIHDDKESKRFKCEQCDKRFSSNAELNKHSSAIHQRLKLHECDLC   82 (843)
Q Consensus        35 ~H~~~h~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~C~~C   82 (843)
                      .|+++|.+  ++||.|+.|++.|.+...|..|+ ..|.+++||.|++|
T Consensus         2 ~H~~~H~~--~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~k~~~C~~C   46 (46)
T 2ene_A            2 SSGSSGTG--EKPYKCNECGKVFRHNSYLSRHQ-RIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSSCCC--SSSEECSSSCCEESSHHHHHHHH-TTTCCCCCCSCCCC
T ss_pred             CcccCCCC--CCCeECCCCCchhCChHHHHHHH-hhcCCCCCCCCCCC
Confidence            48889988  59999999999999999999998 77999999999988

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.86  E-value=8.7e-10  Score=74.12  Aligned_cols=45  Identities=27%  Similarity=0.431  Sum_probs=41.7

Q ss_pred             HHHhhccCCCCCcccccccccccCCHHHHHHhHHhhccCCCceeCCCC
Q psy8169          35 RHLKIHDDKESKRFKCEQCDKRFSSNAELNKHSSAIHQRLKLHECDLC   82 (843)
Q Consensus        35 ~H~~~h~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~C~~C   82 (843)
                      +|+++|.+  ++||.|+.|++.|.+...|..|+ ..|.+++||.|++|
T Consensus         2 ~H~~~H~~--~~~~~C~~C~k~F~~~~~L~~H~-~~H~~~~~~~C~~C   46 (46)
T 2eoe_A            2 SSGSSGTG--EKPYKCNECGKVFTQNSHLANHQ-RIHTGVKPSGPSSG   46 (46)
T ss_dssp             CCSSCCCC--CCSSEETTTTEECSSHHHHHHHH-GGGSCCCSCSSCCC
T ss_pred             CCCCCCCC--CCCeECCCcChhhCCHHHHHHHH-HHcCCCCCCCCCCC
Confidence            48889988  59999999999999999999998 78999999999988

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.86  E-value=6.5e-10  Score=73.90  Aligned_cols=42  Identities=24%  Similarity=0.262  Sum_probs=32.7

Q ss_pred             HHhhcCCCCccccccchhhcCCHHHHHHHHhhccCCCCCccccc
Q psy8169           8 HIKSHEYVENHMCELCYKVFESRENLMRHLKIHDDKESKRFKCE   51 (843)
Q Consensus         8 h~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~C~   51 (843)
                      |+++|+++++|.|++|++.|.+...|..|+++|.+  ++||.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~--~~~~~C~   44 (44)
T 2eoj_A            3 SGSSGTGENPYECCECGKVFSRKDQLVSHQKTHSG--QSGPSSG   44 (44)
T ss_dssp             SCCSSSSCCSCEETTTTEECSSHHHHHHHHTTSSS--SCSCCCC
T ss_pred             CccccCCCcCeeCCCCCCccCCHHHHHHHHHHcCC--CCCCCCC
Confidence            67778888888888888888888888888888776  4777774

>2eod_A TNF receptor-associated factor 4; zinc binding, NF-KB, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.86  E-value=1.4e-09  Score=79.87  Aligned_cols=55  Identities=18%  Similarity=0.278  Sum_probs=51.2

Q ss_pred             ceeecCcChhccCChHHHHHHHHHhcCCCceecc-ccchhcCChhhHHHHHHHccCCC
Q psy8169         274 VYLTCLICFKTFLTEVDLGKHMKMHMDDNQIQCR-FCNKYFSRNYNLKQHMKTCTKNV  330 (843)
Q Consensus       274 ~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~-~C~~~f~~~~~L~~H~~~h~~~~  330 (843)
                      .+|.|.+|++.|. ...|..|+++ .+++||.|+ .|++.|.....|..|+++|....
T Consensus         9 ~~~~C~~C~k~f~-~~~L~~H~~~-~~~~p~~C~~~C~k~f~~~~~L~~H~~~hc~~~   64 (66)
T 2eod_A            9 RTQPCTYCTKEFV-FDTIQSHQYQ-CPRLPVACPNQCGVGTVAREDLPGHLKDSCNTA   64 (66)
T ss_dssp             CEEECSSSCCEEE-HHHHHHHHHH-CSSSEEECTTCCSCCEEETTTHHHHHHTTSSSC
T ss_pred             CCeeccccCCccC-HHHHHHHHHH-cCCcCccCCcccCcccccHHHHHHHHHhhcccC
Confidence            4799999999999 9999999999 999999999 99999999999999999886543

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.86  E-value=8.6e-10  Score=74.12  Aligned_cols=45  Identities=29%  Similarity=0.366  Sum_probs=41.5

Q ss_pred             HHHhhccCCCCCcccccccccccCCHHHHHHhHHhhccCCCceeCCCC
Q psy8169          35 RHLKIHDDKESKRFKCEQCDKRFSSNAELNKHSSAIHQRLKLHECDLC   82 (843)
Q Consensus        35 ~H~~~h~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~C~~C   82 (843)
                      .|+++|.+  ++||.|+.|++.|.+...|..|+ ..|.+++||.|+.|
T Consensus         2 ~H~~~H~~--~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~k~~~C~~C   46 (46)
T 2epz_A            2 SSGSSGTG--EKPFDCIDCGKAFSDHIGLNQHR-RIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSSCCC--CCSBCCTTTCCCBSSHHHHHHHH-TTTTTCCCCSSCCC
T ss_pred             CCCCCcCC--CCCeECCCCCceeCCHHHHHHHH-HHhCCCCCCCCCCC
Confidence            37888987  59999999999999999999998 78999999999988

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.86  E-value=6.5e-10  Score=74.77  Aligned_cols=45  Identities=24%  Similarity=0.291  Sum_probs=41.5

Q ss_pred             HHHhhccCCCCCcccccccccccCCHHHHHHhHHhhccCCCceeCCCC
Q psy8169          35 RHLKIHDDKESKRFKCEQCDKRFSSNAELNKHSSAIHQRLKLHECDLC   82 (843)
Q Consensus        35 ~H~~~h~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~C~~C   82 (843)
                      +|+++|.+  ++||.|+.|++.|.+...|..|+ ..|.+++||.|+.|
T Consensus         2 ~H~~~H~~--~~~~~C~~C~k~f~~~~~L~~H~-~~H~~~k~~~C~~C   46 (46)
T 2eop_A            2 SSGSSGTG--EKPHECRECGKSFSFNSQLIVHQ-RIHTGENPSGPSSG   46 (46)
T ss_dssp             CCCCSCCC--CCSCBCTTTCCBCSSHHHHHHHH-TTTTTSCCSCCCCC
T ss_pred             CCccccCC--CCCeeCCCCCchhCCHHHHHHHH-HHcCCCCCCCCCCC
Confidence            48889987  59999999999999999999998 77999999999987

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.86  E-value=8e-10  Score=74.24  Aligned_cols=43  Identities=23%  Similarity=0.267  Sum_probs=32.9

Q ss_pred             HHHhhcCCCCccccccchhhcCCHHHHHHHHhhccCCCCCccccc
Q psy8169           7 EHIKSHEYVENHMCELCYKVFESRENLMRHLKIHDDKESKRFKCE   51 (843)
Q Consensus         7 ~h~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~C~   51 (843)
                      .|+++|+++++|.|++|++.|.+...|..|+++|.+  ++||.|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~--~k~~~C~   44 (46)
T 2yth_A            2 SSGSSGSGEKPFQCEECGKRFTQNSHLHSHQRVHTG--EKPSGPS   44 (46)
T ss_dssp             CCCSCCCCSSSBCCSSSCCCBSSHHHHHHHGGGGTT--CCCSSCC
T ss_pred             CcccCCCCCcCCCCCCCCcccCCHHHHHHHHHhcCC--CCCCCCC
Confidence            366777778888888888888888888888887776  4777775

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.86  E-value=7e-10  Score=74.56  Aligned_cols=43  Identities=28%  Similarity=0.281  Sum_probs=32.4

Q ss_pred             HHhhcCCCCccccccchhhcCCHHHHHHHHhhccCCCCCcccccc
Q psy8169           8 HIKSHEYVENHMCELCYKVFESRENLMRHLKIHDDKESKRFKCEQ   52 (843)
Q Consensus         8 h~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~C~~   52 (843)
                      |+++|+++++|.|++|++.|.+...|..|+++|.+  ++||.|+.
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~--~k~~~C~~   45 (46)
T 2yti_A            3 SGSSGTGEKPYKCNECGKVFTQNSHLARHRGIHTG--EKPSGPSS   45 (46)
T ss_dssp             CCCCCSCCCTTCCSSSCCCCSSHHHHHHHHTTTSC--SCCSSTTC
T ss_pred             CCcCCCCCcCeECCCCCcccCChhHHHHHhHhcCC--CCCCCCCC
Confidence            66777777778888888888877788888777776  47777753

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.86  E-value=6.1e-10  Score=74.81  Aligned_cols=42  Identities=24%  Similarity=0.281  Sum_probs=30.3

Q ss_pred             HHhhcCCCCccccccchhhcCCHHHHHHHHhhccCCCCCccccc
Q psy8169           8 HIKSHEYVENHMCELCYKVFESRENLMRHLKIHDDKESKRFKCE   51 (843)
Q Consensus         8 h~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~C~   51 (843)
                      |+++|+++++|.|++|++.|.+...|..|+++|.+  ++||.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~--~k~~~C~   44 (46)
T 2ytp_A            3 SGSSGTGERHYECSECGKAFARKSTLIMHQRIHTG--EKPSGPS   44 (46)
T ss_dssp             CCCSSCCCCCEECSSSCCEESSHHHHHHHHTTTSC--CCCCSSC
T ss_pred             cccCcCCCCCeECCcCCcccCCHHHHHHHHHHhCC--CCCCCCC
Confidence            56677777777777777777777777777777766  4677775

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.86  E-value=7.5e-10  Score=74.40  Aligned_cols=43  Identities=26%  Similarity=0.252  Sum_probs=33.4

Q ss_pred             HHHhhcCCCCccccccchhhcCCHHHHHHHHhhccCCCCCccccc
Q psy8169           7 EHIKSHEYVENHMCELCYKVFESRENLMRHLKIHDDKESKRFKCE   51 (843)
Q Consensus         7 ~h~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~C~   51 (843)
                      .|+++|+++++|.|++|++.|.+...|..|+++|.+  ++||.|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~--~k~~~C~   44 (46)
T 2eq1_A            2 SSGSSGTGEKPYKCNECGKAFRAHSNLTTHQVIHTG--EKPSGPS   44 (46)
T ss_dssp             CCCCCCCCSCCCCCTTTTCCCSSHHHHHHHHTTTCC--SCCSSCC
T ss_pred             CcccccCCCCCeECCcCChhhCCHHHHHHHHHHhCC--CCCCCCC
Confidence            367778888888888888888888888888888876  4777775

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.86  E-value=8.2e-10  Score=74.21  Aligned_cols=45  Identities=27%  Similarity=0.415  Sum_probs=41.6

Q ss_pred             HHHhhccCCCCCcccccccccccCCHHHHHHhHHhhccCCCceeCCCC
Q psy8169          35 RHLKIHDDKESKRFKCEQCDKRFSSNAELNKHSSAIHQRLKLHECDLC   82 (843)
Q Consensus        35 ~H~~~h~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~C~~C   82 (843)
                      +|+++|.+  ++||.|+.|++.|.+...|..|+ ..|.+++||.|++|
T Consensus         2 ~H~~~H~~--~k~~~C~~C~k~F~~~~~L~~H~-~~H~~~k~~~C~~C   46 (46)
T 2ytn_A            2 SSGSSGTG--KKPYKCNECGKVFTQNSHLARHR-GIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCSC--CSSCBCTTTCCBCSSHHHHHHHG-GGTSCCCCCSCCCC
T ss_pred             CCCcCCCC--CcCeECCCCCCeeCCHHHHHHHh-hhcCCCCCCCCCCC
Confidence            47888988  59999999999999999999997 78999999999988

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.86  E-value=9.9e-10  Score=73.86  Aligned_cols=45  Identities=27%  Similarity=0.349  Sum_probs=41.8

Q ss_pred             HHHhhccCCCCCcccccccccccCCHHHHHHhHHhhccCCCceeCCCC
Q psy8169          35 RHLKIHDDKESKRFKCEQCDKRFSSNAELNKHSSAIHQRLKLHECDLC   82 (843)
Q Consensus        35 ~H~~~h~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~C~~C   82 (843)
                      +|+++|.+  ++||.|+.|++.|.+...|..|+ ..|.+++||.|++|
T Consensus         2 ~H~~~H~~--~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~~~~~C~~C   46 (46)
T 2eme_A            2 SSGSSGSG--EKPYVCDYCGKAFGLSAELVRHQ-RIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCTTCC--CCSEECSSSCCEESSHHHHHHHH-GGGCCCSCCSSCCC
T ss_pred             CCCCCCCC--CCCeECCCCChhhCCHHHHHHHH-HhcCCCCCCCCCCC
Confidence            48889988  59999999999999999999998 78999999999988

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.86  E-value=8.2e-10  Score=74.18  Aligned_cols=43  Identities=23%  Similarity=0.249  Sum_probs=32.7

Q ss_pred             HHhhcCCCCccccccchhhcCCHHHHHHHHhhccCCCCCcccccc
Q psy8169           8 HIKSHEYVENHMCELCYKVFESRENLMRHLKIHDDKESKRFKCEQ   52 (843)
Q Consensus         8 h~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~C~~   52 (843)
                      |+++|+++++|.|++|++.|.+...|..|+++|++  ++||.|+.
T Consensus         3 h~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~--~k~~~C~~   45 (46)
T 2en9_A            3 SGSSGAGKKLFKCNECKKTFTQSSSLTVHQRIHTG--EKPSGPSS   45 (46)
T ss_dssp             CCSSCCSSCCCBCTTTCCBCSSHHHHHHHHHHHTS--SCCCSCCC
T ss_pred             CCCCCCCCCCEECCccCcccCCHHHHHHHHHHcCC--CCCCCCCC
Confidence            56777777788888888888888888888877776  47777753

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens}

Probab=98.86  E-value=8e-10  Score=74.28  Aligned_cols=45  Identities=24%  Similarity=0.304  Sum_probs=41.6

Q ss_pred             HHHhhccCCCCCcccccccccccCCHHHHHHhHHhhccCCCceeCCCC
Q psy8169          35 RHLKIHDDKESKRFKCEQCDKRFSSNAELNKHSSAIHQRLKLHECDLC   82 (843)
Q Consensus        35 ~H~~~h~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~C~~C   82 (843)
                      +|+++|.+  ++||.|+.|++.|.....|..|+ ..|.+++||.|+.|
T Consensus         2 ~H~~~H~~--~k~~~C~~C~k~F~~~~~L~~H~-~~H~~~~~~~C~~C   46 (46)
T 2em0_A            2 SSGSSGMG--EKTWKCRECDMCFSQASSLRLHQ-NVHVGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSCC--CCCCCCSSSCCCCSSHHHHHHHG-GGGSSSSCSCSSCC
T ss_pred             CCcCccCC--CcCeECCCCCcccCCHHHHHHHH-HHcCCCCCcCCCCC
Confidence            47889987  59999999999999999999998 77999999999988

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.86  E-value=7.4e-10  Score=74.44  Aligned_cols=42  Identities=24%  Similarity=0.230  Sum_probs=32.0

Q ss_pred             HHhhcCCCCccccccchhhcCCHHHHHHHHhhccCCCCCccccc
Q psy8169           8 HIKSHEYVENHMCELCYKVFESRENLMRHLKIHDDKESKRFKCE   51 (843)
Q Consensus         8 h~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~C~   51 (843)
                      |+++|+++++|.|++|++.|.+...|..|+++|.+  ++||.|+
T Consensus         3 H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~--~k~~~C~   44 (46)
T 2emi_A            3 SGSSGTGERHYECSECGKAFIQKSTLSMHQRIHRG--EKPSGPS   44 (46)
T ss_dssp             CCCSCSSCCCEECSSSCCEESSHHHHHHHHGGGCS--CCCCSCC
T ss_pred             CCcccCCCCCCCCCCCCcccCCHHHHHHHHhHhCC--CCCCCCC
Confidence            66777777777787787777777777777777776  4777775

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.86  E-value=6.9e-10  Score=74.60  Aligned_cols=44  Identities=23%  Similarity=0.295  Sum_probs=32.3

Q ss_pred             HHHhhcCCCCccccccchhhcCCHHHHHHHHhhccCCCCCcccccc
Q psy8169           7 EHIKSHEYVENHMCELCYKVFESRENLMRHLKIHDDKESKRFKCEQ   52 (843)
Q Consensus         7 ~h~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~C~~   52 (843)
                      .|+++|+++++|.|++|++.|.+...|..|+++|.+  ++||.|++
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~--~~~~~C~~   45 (46)
T 2em3_A            2 SSGSSGTGEKPYECKVCSKAFTQKAHLAQHQKTHTG--EKPSGPSS   45 (46)
T ss_dssp             CCCCCCSSCCSEECSSSCCEESSHHHHHHHHHHHCC--CCCCCSCC
T ss_pred             CCCCCCCCCcCeECCCCCcccCCHHHHHHHHHHhCC--CCCCCCCC
Confidence            366777777777777777777777777777777776  47777753

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.86  E-value=9.8e-10  Score=73.80  Aligned_cols=45  Identities=24%  Similarity=0.259  Sum_probs=41.3

Q ss_pred             HHHhhccCCCCCcccccccccccCCHHHHHHhHHhhccCCCceeCCCC
Q psy8169          35 RHLKIHDDKESKRFKCEQCDKRFSSNAELNKHSSAIHQRLKLHECDLC   82 (843)
Q Consensus        35 ~H~~~h~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~C~~C   82 (843)
                      .|+++|.+  ++||.|+.|++.|.+...|..|+ ..|.+++||.|++|
T Consensus         2 ~H~~~H~~--~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~k~~~C~~C   46 (46)
T 2ytq_A            2 SSGSSGAG--EKPYGCSECGKAFSSKSYLIIHM-RTHSGEKPSGPSSG   46 (46)
T ss_dssp             CCSSCSSC--CCSCBCSSSCCBCSCHHHHHHHH-TTTCCSCSSCCCCC
T ss_pred             CCCcCcCC--CCCcCCCccChhhCChHHHHHHH-HHhCCCCCCCCCCC
Confidence            37888987  59999999999999999999998 77999999999988

>2epq_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.86  E-value=1.2e-09  Score=72.86  Aligned_cols=43  Identities=16%  Similarity=0.269  Sum_probs=33.3

Q ss_pred             hhcCCCCccccccchhhcCCHHHHHHHHhhccCCCCCcccccccc
Q psy8169          10 KSHEYVENHMCELCYKVFESRENLMRHLKIHDDKESKRFKCEQCD   54 (843)
Q Consensus        10 ~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~C~~C~   54 (843)
                      .+|+++++|.|++|++.|.....|..|+++|.+  +++|.|+.|+
T Consensus         3 ~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~--~~~~~C~~cg   45 (45)
T 2epq_A            3 SGSSGEKPYSCPVCGLRFKRKDRMSYHVRSHDG--SVGKSGPSSG   45 (45)
T ss_dssp             CCCSSCCSSEETTTTEECSCHHHHHHHHHHHSC--CCCCCCCCCC
T ss_pred             CCcCCCCCCcCCCCCcccCCHHHHHHHHHHccC--CCCCCCcCCC
Confidence            357778888888888888888888888888876  4778888775

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.86  E-value=7.4e-10  Score=74.48  Aligned_cols=45  Identities=24%  Similarity=0.318  Sum_probs=41.6

Q ss_pred             HHHhhccCCCCCcccccccccccCCHHHHHHhHHhhccCCCceeCCCC
Q psy8169          35 RHLKIHDDKESKRFKCEQCDKRFSSNAELNKHSSAIHQRLKLHECDLC   82 (843)
Q Consensus        35 ~H~~~h~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~C~~C   82 (843)
                      +|+++|++  ++||.|+.|++.|.+...|..|+ .+|.+++||.|++|
T Consensus         2 ~H~~~H~~--~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~k~~~C~~C   46 (46)
T 2emm_A            2 SSGSSGTG--ERPHKCNECGKSFIQSAHLIQHQ-RIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSCSSC--CCSEECSSSCCEESSHHHHHHHH-HHHSCCCTTSSSCC
T ss_pred             CCcCCcCC--CCCeeCCCCChhhCCHHHHHHHH-HHhCCCCCCCCCCC
Confidence            48889988  59999999999999999999998 67999999999988

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.85  E-value=7.6e-10  Score=74.36  Aligned_cols=45  Identities=24%  Similarity=0.377  Sum_probs=41.4

Q ss_pred             HHHhhccCCCCCcccccccccccCCHHHHHHhHHhhccCCCceeCCCC
Q psy8169          35 RHLKIHDDKESKRFKCEQCDKRFSSNAELNKHSSAIHQRLKLHECDLC   82 (843)
Q Consensus        35 ~H~~~h~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~C~~C   82 (843)
                      .|+++|.+  ++||.|+.|++.|.+...|..|+ ..|.+++||.|++|
T Consensus         2 ~H~~~H~~--~k~~~C~~C~k~F~~~~~L~~H~-~~H~~~k~~~C~~c   46 (46)
T 2emf_A            2 SSGSSGTG--GKHFECTECGKAFTRKSTLSMHQ-KIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSSSSS--SCCEECSSSCCEESCHHHHHHHG-GGTSCSSCSCCCCC
T ss_pred             ccccccCC--CCCeECCCCCchhCCHHHHHHHH-HHhCCCCCCCCCCC
Confidence            47889987  59999999999999999999998 77999999999987

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.85  E-value=9e-10  Score=74.01  Aligned_cols=45  Identities=29%  Similarity=0.431  Sum_probs=41.5

Q ss_pred             HHHhhccCCCCCcccccccccccCCHHHHHHhHHhhccCCCceeCCCC
Q psy8169          35 RHLKIHDDKESKRFKCEQCDKRFSSNAELNKHSSAIHQRLKLHECDLC   82 (843)
Q Consensus        35 ~H~~~h~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~C~~C   82 (843)
                      +|+++|.+  ++||.|++|++.|.+...|..|+ ..|.+++||.|+.|
T Consensus         2 ~H~~~H~~--~~~~~C~~C~k~f~~~~~L~~H~-~~H~~~k~~~C~~C   46 (46)
T 2eoq_A            2 SSGSSGTG--EKPFKCDICGKSFCGRSRLNRHS-MVHTAEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSSS--SCSCCCSSSCCCCSSHHHHHHHH-HHTTCCCSSSCCCC
T ss_pred             CCCCCCCC--CCCcCCCcCCchhCCHHHHHHHH-HHcCCCCCCCCCCC
Confidence            47888987  58999999999999999999998 67999999999988

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.85  E-value=8.1e-10  Score=74.22  Aligned_cols=42  Identities=21%  Similarity=0.258  Sum_probs=30.6

Q ss_pred             HHhhcCCCCccccccchhhcCCHHHHHHHHhhccCCCCCccccc
Q psy8169           8 HIKSHEYVENHMCELCYKVFESRENLMRHLKIHDDKESKRFKCE   51 (843)
Q Consensus         8 h~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~C~   51 (843)
                      |+++|+++++|.|++|++.|.+...|..|+++|++  ++||.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~--~k~~~C~   44 (46)
T 2em6_A            3 SGSSGMGEKCYKCDVCGKEFSQSSHLQTHQRVHTG--EKPSGPS   44 (46)
T ss_dssp             CCSCCCCCCCCBCSSSCCBCSSHHHHHHHHTTTSS--SCCCCTT
T ss_pred             CccccCCCCCeECCCCCcccCCHHHHHHHHHHcCC--CCCCCCC
Confidence            56677777777777777777777777777777766  4677775

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.85  E-value=1.6e-09  Score=75.64  Aligned_cols=44  Identities=30%  Similarity=0.566  Sum_probs=41.3

Q ss_pred             CCcccccccccccCCHHHHHHhHHhhccCCCceeCCCCCCcccc
Q psy8169          45 SKRFKCEQCDKRFSSNAELNKHSSAIHQRLKLHECDLCGKNFSQ   88 (843)
Q Consensus        45 ~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~C~~C~~~f~~   88 (843)
                      ++||.|++|++.|.....|..|++.+|.+++||.|++|++.|.+
T Consensus        10 ~k~~~C~~C~k~f~~~~~L~~H~~~~H~~~k~~~C~~C~k~F~~   53 (54)
T 2eps_A           10 GKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGPSS   53 (54)
T ss_dssp             SCCEECSSSCCEESSHHHHHHHHHHTSCCCCCCCSSSSCCSSCC
T ss_pred             CCCeECCCCCcccCCHHHHHHHHHHhcCCCCCccCCCCCCCCCC
Confidence            68999999999999999999998558999999999999999975

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.85  E-value=7.4e-10  Score=74.35  Aligned_cols=43  Identities=19%  Similarity=0.286  Sum_probs=33.3

Q ss_pred             HHhhcCCCCccccccchhhcCCHHHHHHHHhhccCCCCCcccccc
Q psy8169           8 HIKSHEYVENHMCELCYKVFESRENLMRHLKIHDDKESKRFKCEQ   52 (843)
Q Consensus         8 h~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~C~~   52 (843)
                      |+++|+++++|.|++|++.|.+...|.+|+++|.+  ++||.|+.
T Consensus         3 h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~--~k~~~C~~   45 (46)
T 2eon_A            3 SGSSGTGEKPYKCQVCGKAFRVSSHLVQHHSVHSG--ERPSGPSS   45 (46)
T ss_dssp             CSSSCSSCCSCBCSSSCCBCSSHHHHHHHTTTTTS--CCSCTTSC
T ss_pred             CCCCCCCCcccCCCCCCcccCcHHHHHHHHHhcCC--CCCCCCCC
Confidence            56778888888888888888888888888888776  47787763

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A

Probab=98.85  E-value=9.2e-10  Score=73.96  Aligned_cols=45  Identities=31%  Similarity=0.465  Sum_probs=41.6

Q ss_pred             HHHhhccCCCCCcccccccccccCCHHHHHHhHHhhccCCCceeCCCC
Q psy8169          35 RHLKIHDDKESKRFKCEQCDKRFSSNAELNKHSSAIHQRLKLHECDLC   82 (843)
Q Consensus        35 ~H~~~h~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~C~~C   82 (843)
                      +|+++|.+  ++||.|+.|++.|.+...|..|+ ..|.+++||.|+.|
T Consensus         2 ~H~~~H~~--~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~k~~~C~~c   46 (46)
T 2ema_A            2 SSGSSGTG--EKRYKCNECGKVFSRNSQLSQHQ-KIHTGEKPSGPSSG   46 (46)
T ss_dssp             CSCSSCTT--SCCEECSSSCCEESSHHHHHHHH-TGGGCCCCCSSSCC
T ss_pred             CCccCCCC--CcCcCCCCCcchhCCHHHHHHHH-HhcCCCCCCCCCCC
Confidence            48889988  59999999999999999999998 77999999999987

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.85  E-value=9.8e-10  Score=73.79  Aligned_cols=45  Identities=22%  Similarity=0.335  Sum_probs=41.3

Q ss_pred             HHHhhccCCCCCcccccccccccCCHHHHHHhHHhhccCCCceeCCCC
Q psy8169          35 RHLKIHDDKESKRFKCEQCDKRFSSNAELNKHSSAIHQRLKLHECDLC   82 (843)
Q Consensus        35 ~H~~~h~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~C~~C   82 (843)
                      .|+++|.+  ++||.|+.|++.|.+...|..|+ ..|.+++||.|++|
T Consensus         2 ~h~~~h~~--~k~~~C~~C~k~F~~~~~L~~H~-~~H~~~~~~~C~~C   46 (46)
T 2elz_A            2 SSGSSGSV--EKPYKCEDCGKGYNRRLNLDMHQ-RVHMGEKTSGPSSG   46 (46)
T ss_dssp             CCCSCCCC--CSSCBCSSSCCBCSSHHHHHHHG-GGGGSCCCCCSCCC
T ss_pred             CCCCCCCC--CCCeeCcccCchhCCHHHHHHHH-HhcCCCCCCCCCCC
Confidence            37888987  59999999999999999999998 78999999999988

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.85  E-value=9.9e-10  Score=73.82  Aligned_cols=45  Identities=22%  Similarity=0.346  Sum_probs=41.6

Q ss_pred             HHHhhccCCCCCcccccccccccCCHHHHHHhHHhhccCCCceeCCCC
Q psy8169          35 RHLKIHDDKESKRFKCEQCDKRFSSNAELNKHSSAIHQRLKLHECDLC   82 (843)
Q Consensus        35 ~H~~~h~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~C~~C   82 (843)
                      .|+++|.+  ++||.|+.|++.|.+...|..|+ ..|.+++||.|++|
T Consensus         2 ~H~~~H~~--~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~k~~~C~~c   46 (46)
T 2ep2_A            2 SSGSSGTG--EKPYECSICGKSFTKKSQLHVHQ-QIHTGEKPSGPSSG   46 (46)
T ss_dssp             CSSSCSSC--CCSEECSSSCCEESSHHHHHHHH-HTTSSCCSCCSCCC
T ss_pred             CCCCCCCC--CcCcCCCCCCcccCCHHHHHHHH-HHhCCCCCCCCCCC
Confidence            48889988  59999999999999999999998 67999999999987

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.85  E-value=7e-10  Score=74.54  Aligned_cols=43  Identities=23%  Similarity=0.172  Sum_probs=33.1

Q ss_pred             HhhcCCCCccccccchhhcCCHHHHHHHHhhccCCCCCccccccc
Q psy8169           9 IKSHEYVENHMCELCYKVFESRENLMRHLKIHDDKESKRFKCEQC   53 (843)
Q Consensus         9 ~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~C~~C   53 (843)
                      +++|.++++|.|++|++.|.+...|..|+++|.+  ++||.|++|
T Consensus         4 ~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~--~k~~~C~~C   46 (46)
T 2ytt_A            4 GSSGEGEKPYQCSECGKSFSGSYRLTQHWITHTR--EKPSGPSSG   46 (46)
T ss_dssp             SSSCSCCCTTCCSSSCCCCSSHHHHHHHHTHHHH--CCCCSCCCC
T ss_pred             CCCCCCCCCeeCCCCCcccCCHHHHHHHHHHcCC--CCCCCCCCC
Confidence            4567778888888888888888888888888776  477887776

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.85  E-value=7.2e-10  Score=74.55  Aligned_cols=43  Identities=23%  Similarity=0.308  Sum_probs=31.3

Q ss_pred             HHhhcCCCCccccccchhhcCCHHHHHHHHhhccCCCCCcccccc
Q psy8169           8 HIKSHEYVENHMCELCYKVFESRENLMRHLKIHDDKESKRFKCEQ   52 (843)
Q Consensus         8 h~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~C~~   52 (843)
                      |+++|+++++|.|++|++.|.+...|..|+++|.+  ++||.|++
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~--~k~~~C~~   45 (46)
T 2ytf_A            3 SGSSGTGEKPFECSECQKAFNTKSNLIVHQRTHTG--EKPSGPSS   45 (46)
T ss_dssp             CCCSSCCCCSEECSSSCCEESSHHHHHHHHHTSCS--SSSSCCCC
T ss_pred             CCCCCCCCCCcCCCCCCcccCCHHHHHHHHHHhCC--CCCCCCCC
Confidence            56677777777777777777777777777777776  46777753

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.85  E-value=1e-09  Score=73.82  Aligned_cols=45  Identities=27%  Similarity=0.408  Sum_probs=41.7

Q ss_pred             HHHhhccCCCCCcccccccccccCCHHHHHHhHHhhccCCCceeCCCC
Q psy8169          35 RHLKIHDDKESKRFKCEQCDKRFSSNAELNKHSSAIHQRLKLHECDLC   82 (843)
Q Consensus        35 ~H~~~h~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~C~~C   82 (843)
                      +|+++|.+  ++||.|+.|++.|.+...|..|+ .+|.+++||.|++|
T Consensus         2 ~H~~~H~~--~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~~~~~C~~C   46 (46)
T 2ytr_A            2 SSGSSGTG--EKPYKCNECGKAFSQTSKLARHQ-RIHTGEKPSGPSSG   46 (46)
T ss_dssp             CSSCCCSS--CCTTCCTTTCCCCSSHHHHHHHH-TTTTTCSCCCSCCC
T ss_pred             CCCcCCCC--CcCcCCCCCCCccCCHHHHHHHH-HhcCCCCCCCCCCC
Confidence            48889988  59999999999999999999998 77999999999988

>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.85  E-value=6.3e-10  Score=74.84  Aligned_cols=45  Identities=20%  Similarity=0.272  Sum_probs=41.7

Q ss_pred             HHHhhccCCCCCcccccccccccCCHHHHHHhHHhhccCCCceeCCCC
Q psy8169          35 RHLKIHDDKESKRFKCEQCDKRFSSNAELNKHSSAIHQRLKLHECDLC   82 (843)
Q Consensus        35 ~H~~~h~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~C~~C   82 (843)
                      +|+++|.+  ++||.|+.|++.|.+...|..|+ ..|.+++||.|+.|
T Consensus         2 ~H~~~H~~--~~~~~C~~C~k~f~~~~~L~~H~-~~H~~~k~~~C~~C   46 (46)
T 2en8_A            2 SSGSSGSG--EKSHTCDECGKNFCYISALRIHQ-RVHMGEKCSGPSSG   46 (46)
T ss_dssp             CCCCCCCC--CSSEECTTTCCEESSHHHHHHHH-TTTCCSCSSCCSCC
T ss_pred             CccccCCC--CCCeECCCcCcccCCHHHHHHHH-HHhCCCCCCCCCCC
Confidence            48889987  59999999999999999999998 78999999999988

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A

Probab=98.85  E-value=7.6e-10  Score=74.35  Aligned_cols=45  Identities=29%  Similarity=0.372  Sum_probs=41.4

Q ss_pred             HHHhhccCCCCCcccccccccccCCHHHHHHhHHhhccCCCceeCCCC
Q psy8169          35 RHLKIHDDKESKRFKCEQCDKRFSSNAELNKHSSAIHQRLKLHECDLC   82 (843)
Q Consensus        35 ~H~~~h~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~C~~C   82 (843)
                      .|+++|.+  ++||.|+.|++.|.+...|..|+ ..|.+++||.|++|
T Consensus         2 ~H~~~H~~--~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~k~~~C~~C   46 (46)
T 2ely_A            2 SSGSSGTG--EKPFKCVECGKGFSRRSALNVHH-KLHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCC--CCSBCCSSSCCCBSSTTHHHHHH-HHHSCCSSCSCCCC
T ss_pred             CCCCCCCC--CCCcccCccCcccCCHHHHHHHH-HHcCCCCCCCCCCC
Confidence            37889987  59999999999999999999998 67999999999988

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.85  E-value=8.9e-10  Score=73.25  Aligned_cols=43  Identities=21%  Similarity=0.288  Sum_probs=33.4

Q ss_pred             HHHhhcCCCCccccccchhhcCCHHHHHHHHhhccCCCCCccccc
Q psy8169           7 EHIKSHEYVENHMCELCYKVFESRENLMRHLKIHDDKESKRFKCE   51 (843)
Q Consensus         7 ~h~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~C~   51 (843)
                      .|+++|+++++|.|++|++.|.+...|..|+++|.+  ++||.|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~--~~~~~C~   44 (44)
T 2en7_A            2 SSGSSGTGMKPYVCNECGKAFRSKSYLIIHTRTHTG--ESGPSSG   44 (44)
T ss_dssp             CSCCCSSSSSSSCCTTTCCCCSSHHHHHHHHTTTCC--SSSSCCC
T ss_pred             CCCcCCCCCcCeECCCCCCccCCHHHHHHHhhhcCC--CCCCCCC
Confidence            367778888888888888888888888888888876  4777774

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.85  E-value=1e-09  Score=73.75  Aligned_cols=45  Identities=24%  Similarity=0.361  Sum_probs=41.6

Q ss_pred             HHHhhccCCCCCcccccccccccCCHHHHHHhHHhhccCCCceeCCCC
Q psy8169          35 RHLKIHDDKESKRFKCEQCDKRFSSNAELNKHSSAIHQRLKLHECDLC   82 (843)
Q Consensus        35 ~H~~~h~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~C~~C   82 (843)
                      +|+++|++  ++||.|+.|++.|.+...|..|+ ..|.+++||.|++|
T Consensus         2 ~H~~~H~~--~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~k~~~C~~c   46 (46)
T 2ytj_A            2 SSGSSGTG--EKPYICAECGKAFTIRSNLIKHQ-KIHTKQKPSGPSSG   46 (46)
T ss_dssp             CSSCTTSS--CCSEECSSSCCEESSHHHHHHHH-HHTSCCCCSSCSCC
T ss_pred             CcccCCCC--CcCeECCCCChhhCCHHHHHHHH-HHcCCCCCCCCCCC
Confidence            58889988  59999999999999999999998 67999999999987

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A

Probab=98.85  E-value=7.9e-10  Score=74.33  Aligned_cols=45  Identities=24%  Similarity=0.299  Sum_probs=41.7

Q ss_pred             HHHhhccCCCCCcccccccccccCCHHHHHHhHHhhccCCCceeCCCC
Q psy8169          35 RHLKIHDDKESKRFKCEQCDKRFSSNAELNKHSSAIHQRLKLHECDLC   82 (843)
Q Consensus        35 ~H~~~h~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~C~~C   82 (843)
                      +|+++|.+  ++||.|+.|++.|.+...|..|+ ..|.+++||.|+.|
T Consensus         2 ~H~~~H~~--~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~k~~~C~~C   46 (46)
T 2el4_A            2 SSGSSGTG--VKPYGCSQCAKTFSLKSQLIVHQ-RSHTGVKPSGPSSG   46 (46)
T ss_dssp             CCCCCSCC--CCSEECSSSSCEESSHHHHHHHG-GGSSSCCCSCCTTC
T ss_pred             ccccCCCC--CCceECCCCCchhCCHHHHHHHH-HHhCCCCCCCCCCC
Confidence            48889988  59999999999999999999998 77999999999987

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.85  E-value=7.7e-10  Score=74.39  Aligned_cols=43  Identities=26%  Similarity=0.294  Sum_probs=32.4

Q ss_pred             HHhhcCCCCccccccchhhcCCHHHHHHHHhhccCCCCCcccccc
Q psy8169           8 HIKSHEYVENHMCELCYKVFESRENLMRHLKIHDDKESKRFKCEQ   52 (843)
Q Consensus         8 h~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~C~~   52 (843)
                      |+++|+++++|.|++|++.|.+...|..|+++|.+  ++||.|++
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~--~~p~~C~~   45 (46)
T 2yts_A            3 SGSSGTGEKPYICNECGKSFIQKSHLNRHRRIHTG--EKPSGPSS   45 (46)
T ss_dssp             CSCCCCSCCSEECSSSCCEESSHHHHHHHGGGTSS--CCSSCCCC
T ss_pred             CCCCCCCCcCEECCCCChhhCChHHHHHHHHhcCC--CCCcCCCC
Confidence            66777777778888888888878888888777776  47777753

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.85  E-value=8.7e-10  Score=74.09  Aligned_cols=45  Identities=27%  Similarity=0.387  Sum_probs=41.5

Q ss_pred             HHHhhccCCCCCcccccccccccCCHHHHHHhHHhhccCCCceeCCCC
Q psy8169          35 RHLKIHDDKESKRFKCEQCDKRFSSNAELNKHSSAIHQRLKLHECDLC   82 (843)
Q Consensus        35 ~H~~~h~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~C~~C   82 (843)
                      .|+++|.+  ++||.|+.|++.|.+...|..|+ ..|.+++||.|++|
T Consensus         2 ~H~~~H~~--~k~~~C~~C~k~F~~~~~L~~H~-~~H~~~k~~~C~~c   46 (46)
T 2eq0_A            2 SSGSSGTG--EKPYKCHECGKVFRRNSHLARHQ-LIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCTTC--CCCEECTTTCCEESSHHHHHHHH-TTTCCCCCSCCSCC
T ss_pred             CCCcCCCC--CCCeECCCCCchhCCHHHHHHHH-HHcCCCCCCCCCCC
Confidence            47888987  59999999999999999999998 77999999999987

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens}

Probab=98.84  E-value=1.7e-09  Score=81.24  Aligned_cols=54  Identities=30%  Similarity=0.708  Sum_probs=41.4

Q ss_pred             cCCCCcccccc--chhhcCCHHHHHHHHhhccCCCCCcccccc--cccccCCHHHHHHhH
Q psy8169          12 HEYVENHMCEL--CYKVFESRENLMRHLKIHDDKESKRFKCEQ--CDKRFSSNAELNKHS   67 (843)
Q Consensus        12 h~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~~~C~~--C~~~f~~~~~l~~H~   67 (843)
                      +...++|.|.+  |+++|.+...|..|+++|.+  ++||.|++  |++.|.+...|..|+
T Consensus        12 ~~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~--~~~~~C~~~~C~k~f~~~~~l~~H~   69 (72)
T 2epa_A           12 SSRIRSHICSHPGCGKTYFKSSHLKAHTRTHTG--EKPFSCSWKGCERRFARSDELSRHR   69 (72)
T ss_dssp             CCCCCCEECSSTTTCCEESSHHHHHHHHHHHSS--SCSEECCCTTCCCEESSHHHHHHHT
T ss_pred             ccccCceeCCCCCCccccCCHHHHHHHHHhcCC--CCCccCCCCCCCcccCCHHHHHhHh
Confidence            45667788877  88888888888888888876  47788854  888888888888886

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.84  E-value=8.6e-10  Score=73.33  Aligned_cols=43  Identities=23%  Similarity=0.305  Sum_probs=32.5

Q ss_pred             HHHhhcCCCCccccccchhhcCCHHHHHHHHhhccCCCCCccccc
Q psy8169           7 EHIKSHEYVENHMCELCYKVFESRENLMRHLKIHDDKESKRFKCE   51 (843)
Q Consensus         7 ~h~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~C~   51 (843)
                      .|+++|+++++|.|++|++.|.+...|..|+++|++  ++||.|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~--~~~~~C~   44 (44)
T 2eof_A            2 SSGSSGTGEKPYECNECQKAFNTKSNLMVHQRTHTG--ESGPSSG   44 (44)
T ss_dssp             CCSSCCSCCCSEECTTTCCEESCHHHHHHHHHHTTT--SSCSCCC
T ss_pred             CCccCCCCCCCeECCCCCcccCCHhHHHHHHHHhCC--CCCCCCC
Confidence            366777777788888888888888888888877776  4777774

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.84  E-value=8.7e-10  Score=74.09  Aligned_cols=45  Identities=20%  Similarity=0.277  Sum_probs=41.5

Q ss_pred             HHHhhccCCCCCcccccccccccCCHHHHHHhHHhhccCCCceeCCCC
Q psy8169          35 RHLKIHDDKESKRFKCEQCDKRFSSNAELNKHSSAIHQRLKLHECDLC   82 (843)
Q Consensus        35 ~H~~~h~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~C~~C   82 (843)
                      +|+++|.+  ++||.|+.|++.|.+...|..|+ ..|.+++||.|+.|
T Consensus         2 ~H~~~H~~--~k~~~C~~C~k~F~~~~~L~~H~-~~H~~~k~~~C~~C   46 (46)
T 2emy_A            2 SSGSSGTG--ENPYECHECGKAFSRKYQLISHQ-RTHAGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCS--SCCEECSSSCCEESSHHHHHHHH-HHHTTSCCSCSSCC
T ss_pred             CCCCCCCC--CcCcCCCCCCcccCcHHHHHHHH-HHcCCCCCCCCCCC
Confidence            47889987  59999999999999999999998 67999999999988

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.84  E-value=8.2e-10  Score=74.21  Aligned_cols=45  Identities=24%  Similarity=0.327  Sum_probs=41.6

Q ss_pred             HHHhhccCCCCCcccccccccccCCHHHHHHhHHhhccCCCceeCCCC
Q psy8169          35 RHLKIHDDKESKRFKCEQCDKRFSSNAELNKHSSAIHQRLKLHECDLC   82 (843)
Q Consensus        35 ~H~~~h~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~C~~C   82 (843)
                      +|+++|.+  ++||.|+.|++.|.+...|..|+ ..|.+++||.|++|
T Consensus         2 ~H~~~H~~--~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~k~~~C~~C   46 (46)
T 2emp_A            2 SSGSSGTG--VKPYMCNECGKAFSVYSSLTTHQ-VIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSCSSC--CCSEECSSSCCEESCHHHHHHHH-HHHHCCSCCSCCCC
T ss_pred             CcccccCC--CcCeECCCCCchhCCHHHHHHHH-HHcCCCCCCCCCCC
Confidence            48889988  59999999999999999999998 67999999999988

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.84  E-value=8.9e-10  Score=74.04  Aligned_cols=45  Identities=24%  Similarity=0.354  Sum_probs=41.3

Q ss_pred             HHHhhccCCCCCcccccccccccCCHHHHHHhHHhhccCCCceeCCCC
Q psy8169          35 RHLKIHDDKESKRFKCEQCDKRFSSNAELNKHSSAIHQRLKLHECDLC   82 (843)
Q Consensus        35 ~H~~~h~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~C~~C   82 (843)
                      .|+++|.+  +++|.|+.|++.|.+...|..|+ .+|.+++||.|++|
T Consensus         2 ~H~~~H~~--~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~k~~~C~~C   46 (46)
T 2em7_A            2 SSGSSGTG--EKPYKCEECGKGFICRRDLYTHH-MVHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCSSSC--CCSEECSSSCCEESCHHHHHHHG-GGGTTCCCSSTTCC
T ss_pred             CCCCCCCC--CcCccCCCccchhCCHHHHHHHH-HHhCCCCCCCCCCC
Confidence            37888987  58999999999999999999997 77999999999988

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.84  E-value=7.2e-10  Score=74.55  Aligned_cols=43  Identities=26%  Similarity=0.237  Sum_probs=31.8

Q ss_pred             HHhhcCCCCccccccchhhcCCHHHHHHHHhhccCCCCCcccccc
Q psy8169           8 HIKSHEYVENHMCELCYKVFESRENLMRHLKIHDDKESKRFKCEQ   52 (843)
Q Consensus         8 h~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~C~~   52 (843)
                      |+++|+++++|.|++|++.|.+...|..|+++|.+  ++||.|++
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~--~kp~~C~~   45 (46)
T 2eor_A            3 SGSSGTGEKPYNCEECGKAFIHDSQLQEHQRIHTG--EKPSGPSS   45 (46)
T ss_dssp             SSSSSSCCCSEECTTTCCEESSHHHHHHHHHHHHS--CCCSSSTT
T ss_pred             CCcCcCCCcCccCCCCCCCcCCHHHHHHHHHhcCC--CCCCCCCC
Confidence            66777777777777777777777777777777776  46777753

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.84  E-value=9.2e-10  Score=73.97  Aligned_cols=45  Identities=27%  Similarity=0.380  Sum_probs=41.5

Q ss_pred             HHHhhccCCCCCcccccccccccCCHHHHHHhHHhhccCCCceeCCCC
Q psy8169          35 RHLKIHDDKESKRFKCEQCDKRFSSNAELNKHSSAIHQRLKLHECDLC   82 (843)
Q Consensus        35 ~H~~~h~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~C~~C   82 (843)
                      +|+++|.+  ++||.|+.|++.|.+...|..|+ ..|.+++||.|++|
T Consensus         2 ~H~~~H~~--~~~~~C~~C~k~f~~~~~L~~H~-~~H~~~~~~~C~~c   46 (46)
T 2ytk_A            2 SSGSSGSG--EKPYKCNECGKVFTQNSHLTNHW-RIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSSS--SCSEECSSSCCEESSHHHHHHHH-HHHSSSSCSSCCCC
T ss_pred             CCcccCCC--CCCEeCCcCCCccCCHHHHHHHH-HHHCCCCCCCCCCC
Confidence            47888987  59999999999999999999998 67999999999987

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.84  E-value=9.4e-10  Score=73.93  Aligned_cols=45  Identities=24%  Similarity=0.414  Sum_probs=41.5

Q ss_pred             HHHhhccCCCCCcccccccccccCCHHHHHHhHHhhccCCCceeCCCC
Q psy8169          35 RHLKIHDDKESKRFKCEQCDKRFSSNAELNKHSSAIHQRLKLHECDLC   82 (843)
Q Consensus        35 ~H~~~h~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~C~~C   82 (843)
                      .|+++|.+  ++||.|+.|++.|.+...|..|+ .+|.+++||.|+.|
T Consensus         2 ~H~~~H~~--~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~~~~~C~~C   46 (46)
T 2ytd_A            2 SSGSSGSG--EKPYKCSECGKAFHRHTHLNEHR-RIHTGYRPSGPSSG   46 (46)
T ss_dssp             CCCCCSCC--CCSEECSSSCCEESSHHHHHHHH-HHHTCCCSSCSSCC
T ss_pred             CCccccCC--CcCeECCCCCCeeCChHHHHHHH-HHcCCCCCCCCCCC
Confidence            47889988  58999999999999999999998 77999999999988

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.84  E-value=8e-10  Score=74.25  Aligned_cols=45  Identities=20%  Similarity=0.298  Sum_probs=41.5

Q ss_pred             HHHhhccCCCCCcccccccccccCCHHHHHHhHHhhccCCCceeCCCC
Q psy8169          35 RHLKIHDDKESKRFKCEQCDKRFSSNAELNKHSSAIHQRLKLHECDLC   82 (843)
Q Consensus        35 ~H~~~h~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~C~~C   82 (843)
                      +|+++|.+  ++||.|+.|++.|.+...|..|+ ..|.+++||.|+.|
T Consensus         2 ~H~~~H~~--~k~~~C~~C~k~F~~~~~L~~H~-~~H~~~k~~~C~~C   46 (46)
T 2eoo_A            2 SSGSSGSG--ERPYGCNECGKNFGRHSHLIEHL-KRHFREKSSGPSSG   46 (46)
T ss_dssp             CCCCCCSC--CCCEECSSSCCEESSHHHHHHHH-HHHHSTTSSCCSCC
T ss_pred             CCCCCCCC--CCCEEccccCcccCCHHHHHHHH-HHHcCCCCCCCCCC
Confidence            58889988  59999999999999999999998 66999999999988

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.84  E-value=8.1e-10  Score=74.24  Aligned_cols=45  Identities=22%  Similarity=0.314  Sum_probs=41.5

Q ss_pred             HHHhhccCCCCCcccccccccccCCHHHHHHhHHhhccCCCceeCCCC
Q psy8169          35 RHLKIHDDKESKRFKCEQCDKRFSSNAELNKHSSAIHQRLKLHECDLC   82 (843)
Q Consensus        35 ~H~~~h~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~C~~C   82 (843)
                      +|+++|.+  ++||.|+.|++.|.+...|..|+ ..|.+++||.|++|
T Consensus         2 ~H~~~H~~--~k~~~C~~C~k~F~~~~~L~~H~-~~H~~~k~~~C~~c   46 (46)
T 2emh_A            2 SSGSSGTG--ERPYICTVCGKAFTDRSNLIKHQ-KIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCSCSC--CCSEECTTTCCEESSHHHHHHHH-HHHHCSSCSSSCCC
T ss_pred             CCCCCCCC--CCCcCCCCCCchhCCHHHHHHHH-HhcCCCCCCCCCCC
Confidence            48889987  59999999999999999999998 67999999999987

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.84  E-value=1e-09  Score=73.70  Aligned_cols=45  Identities=20%  Similarity=0.345  Sum_probs=41.1

Q ss_pred             HHHhhccCCCCCcccccccccccCCHHHHHHhHHhhccCCCceeCCCC
Q psy8169          35 RHLKIHDDKESKRFKCEQCDKRFSSNAELNKHSSAIHQRLKLHECDLC   82 (843)
Q Consensus        35 ~H~~~h~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~C~~C   82 (843)
                      .|+++|.+  ++||.|+.|++.|.+...|..|+ ..|.+++||.|++|
T Consensus         2 ~h~~~h~~--~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~~~~~C~~C   46 (46)
T 2ytm_A            2 SSGSSGTG--EKPYKCMECGKAFGDNSSCTQHQ-RLHTGQRPSGPSSG   46 (46)
T ss_dssp             CSCCCCSS--CCSSSBTTTTBCCSSHHHHHHHH-HHHHSCCCCCCCCC
T ss_pred             CCCcCCCC--CCCcCCCCCCchhCCHHHHHHHH-HHcCCCCCCCCCCC
Confidence            37788987  59999999999999999999998 67999999999988

>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.84  E-value=1.4e-09  Score=73.73  Aligned_cols=43  Identities=26%  Similarity=0.404  Sum_probs=29.8

Q ss_pred             hcCCCCccccccchhhcCCHHHHHHHHhhccCCCCCccccccccc
Q psy8169          11 SHEYVENHMCELCYKVFESRENLMRHLKIHDDKESKRFKCEQCDK   55 (843)
Q Consensus        11 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~C~~C~~   55 (843)
                      .|.++++|.|++|++.|.+...|..|+++|++  ++||.|++|++
T Consensus         6 ~~~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~--~k~~~C~~C~k   48 (48)
T 2epr_A            6 SGRTRKQVACEICGKIFRDVYHLNRHKLSHSG--EKPYSSGPSSG   48 (48)
T ss_dssp             CCCCCCSEEETTTTEEESSHHHHHHHGGGSCS--CCCCCSCCCCC
T ss_pred             CCCCCcCeeCCCCCcccCCHHHHHHHHHhcCC--CCCccCCCCCC
Confidence            35566677777777777777777777777766  46777777764

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens}

Probab=98.84  E-value=1.3e-09  Score=81.85  Aligned_cols=53  Identities=36%  Similarity=0.791  Sum_probs=48.9

Q ss_pred             CCCCCcc--ccccccchhhhhhhhhccccCCCCCCccchhhcccccccccccccccccc--hhhhhhhHHHHhhhhhhh
Q psy8169         661 DRIPCTL--CDKTFTRKDSLKKHIRIFHTQNQPQHTNVIEVALGARANAAFIDRIRCEL--CDKSFTRKDSLKKHNRIF  735 (843)
Q Consensus       661 ~~~~C~~--C~~~f~~~~~L~~H~~~~H~~~~p~~~~~~~~~~~~~~~~~~~~~~~C~~--C~~~f~~~~~L~~H~~~~  735 (843)
                      .+|.|++  |++.|.....|..|++. |.+++|                     |+|.+  |++.|..+..|..|++.|
T Consensus        16 ~~~~C~~~~C~k~f~~~~~L~~H~~~-H~~~~~---------------------~~C~~~~C~k~f~~~~~l~~H~~~H   72 (72)
T 2epa_A           16 RSHICSHPGCGKTYFKSSHLKAHTRT-HTGEKP---------------------FSCSWKGCERRFARSDELSRHRRTH   72 (72)
T ss_dssp             CCEECSSTTTCCEESSHHHHHHHHHH-HSSSCS---------------------EECCCTTCCCEESSHHHHHHHTTTC
T ss_pred             CceeCCCCCCccccCCHHHHHHHHHh-cCCCCC---------------------ccCCCCCCCcccCCHHHHHhHhhcC
Confidence            4499999  99999999999999998 999998                     99976  999999999999999864

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.84  E-value=1.1e-09  Score=73.58  Aligned_cols=45  Identities=31%  Similarity=0.493  Sum_probs=41.7

Q ss_pred             HHHhhccCCCCCcccccccccccCCHHHHHHhHHhhccCCCceeCCCC
Q psy8169          35 RHLKIHDDKESKRFKCEQCDKRFSSNAELNKHSSAIHQRLKLHECDLC   82 (843)
Q Consensus        35 ~H~~~h~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~C~~C   82 (843)
                      +|+++|.+  ++||.|+.|++.|.+...|..|+ ..|.+++||.|+.|
T Consensus         2 ~H~~~H~~--~~~~~C~~C~k~f~~~~~L~~H~-~~H~~~~~~~C~~C   46 (46)
T 2en1_A            2 SSGSSGSG--EKPFKCEECGKRFTQNSQLHSHQ-RVHTGEKPSGPSSG   46 (46)
T ss_dssp             CSTTCCCC--CCSEEETTTTEEESSHHHHHHHG-GGGSCCCCSCCCCC
T ss_pred             CcccCCCC--CCCeeCCCCCcccCCHHHHHHHH-HHcCCCCCCCCCCC
Confidence            58889988  59999999999999999999998 77999999999988

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.84  E-value=1e-09  Score=73.73  Aligned_cols=42  Identities=19%  Similarity=0.217  Sum_probs=31.4

Q ss_pred             HHhhcCCCCccccccchhhcCCHHHHHHHHhhccCCCCCccccc
Q psy8169           8 HIKSHEYVENHMCELCYKVFESRENLMRHLKIHDDKESKRFKCE   51 (843)
Q Consensus         8 h~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~C~   51 (843)
                      |+++|+++++|.|++|++.|.....|..|+++|++  ++||.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~--~k~~~C~   44 (46)
T 2eoh_A            3 SGSSGSGKKPYECKECRKTFIQIGHLNQHKRVHTG--ERSSGPS   44 (46)
T ss_dssp             CCCSCCCSCSCCCSSSCCCCSSHHHHHHHHHHCSS--CCSCSTT
T ss_pred             CCCCcCCCCCcCCCCcCchhCCHHHHHHHHHHhCC--CCCCCCC
Confidence            56777777777777777777777777777777776  4677775

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A

Probab=98.84  E-value=9.9e-10  Score=73.84  Aligned_cols=45  Identities=22%  Similarity=0.293  Sum_probs=41.6

Q ss_pred             HHHhhccCCCCCcccccccccccCCHHHHHHhHHhhccCCCceeCCCC
Q psy8169          35 RHLKIHDDKESKRFKCEQCDKRFSSNAELNKHSSAIHQRLKLHECDLC   82 (843)
Q Consensus        35 ~H~~~h~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~C~~C   82 (843)
                      .|+++|.+  ++||.|+.|++.|.+...|..|+ ..|.+++||.|++|
T Consensus         2 ~H~~~H~~--~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~~~~~C~~C   46 (46)
T 2em9_A            2 SSGSSGTG--EKPYNCKECGKSFRWASCLLKHQ-RVHSGEKPSGPSSG   46 (46)
T ss_dssp             CSCCSCCC--CCSEECSSSCCEESSHHHHHHHG-GGGTSCCCCSTTCC
T ss_pred             CCCCCCCC--CcCeECCccccccCChHHHHHHH-HHhCCCCCCCCCCC
Confidence            48889988  59999999999999999999997 77999999999988

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.84  E-value=8e-10  Score=74.30  Aligned_cols=42  Identities=26%  Similarity=0.294  Sum_probs=30.4

Q ss_pred             HHhhcCCCCccccccchhhcCCHHHHHHHHhhccCCCCCccccc
Q psy8169           8 HIKSHEYVENHMCELCYKVFESRENLMRHLKIHDDKESKRFKCE   51 (843)
Q Consensus         8 h~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~C~   51 (843)
                      |+++|+++++|.|++|++.|.+...|..|+++|.+  ++||.|+
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~--~k~~~C~   44 (46)
T 2yrj_A            3 SGSSGTGEKPYRCGECGKAFAQKANLTQHQRIHTG--EKPSGPS   44 (46)
T ss_dssp             CCCCCCCCCCEECSSSCCEESSHHHHHHHHTTTSS--CCSSCSC
T ss_pred             CccCCCCCCCeECCCCCCccCCHHHHHHHHHHcCC--CCCCCCC
Confidence            56677777777777777777777777777777766  4677775

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.83  E-value=9.6e-10  Score=73.88  Aligned_cols=45  Identities=22%  Similarity=0.369  Sum_probs=41.4

Q ss_pred             HHHhhccCCCCCcccccccccccCCHHHHHHhHHhhccCCCceeCCCC
Q psy8169          35 RHLKIHDDKESKRFKCEQCDKRFSSNAELNKHSSAIHQRLKLHECDLC   82 (843)
Q Consensus        35 ~H~~~h~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~C~~C   82 (843)
                      .|+++|.+  ++||.|+.|++.|.+...|..|+ ..|.+++||.|++|
T Consensus         2 ~H~~~h~~--~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~~~~~C~~C   46 (46)
T 2ysp_A            2 SSGSSGTG--EKPYKCEKCGKGYNSKFNLDMHQ-KVHTGERPSGPSSG   46 (46)
T ss_dssp             CCCCCCSS--CCSEEETTTTEEESCHHHHHHHH-TTSCSCCSSCCSCC
T ss_pred             CCCcCCCC--CCCeECCCCCCccCCHHHHHHHH-HhhCCCCCCCCCCC
Confidence            37888987  59999999999999999999998 77999999999988

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.83  E-value=8.8e-10  Score=74.03  Aligned_cols=43  Identities=19%  Similarity=0.179  Sum_probs=33.1

Q ss_pred             HHHhhcCCCCccccccchhhcCCHHHHHHHHhhccCCCCCccccc
Q psy8169           7 EHIKSHEYVENHMCELCYKVFESRENLMRHLKIHDDKESKRFKCE   51 (843)
Q Consensus         7 ~h~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~C~   51 (843)
                      .|+++|+++++|.|++|++.|.+...|..|+++|.+  ++||.|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~--~k~~~C~   44 (46)
T 2yto_A            2 SSGSSGTGEKPYKCSDCGKAFTRKSGLHIHQQSHTG--ERHSGPS   44 (46)
T ss_dssp             CCCCCCCSCCCEECSSSCCEESSHHHHHHHHHHHTC--CCBTTTB
T ss_pred             CcccccCCCCCEECcccCCccCCHhHHHHHHHHcCC--CCCCCCC
Confidence            366778888888888888888888888888888876  4777775

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.83  E-value=9.2e-10  Score=73.94  Aligned_cols=42  Identities=21%  Similarity=0.265  Sum_probs=31.5

Q ss_pred             HHhhcCCCCccccccchhhcCCHHHHHHHHhhccCCCCCccccc
Q psy8169           8 HIKSHEYVENHMCELCYKVFESRENLMRHLKIHDDKESKRFKCE   51 (843)
Q Consensus         8 h~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~C~   51 (843)
                      |+++|+++++|.|++|++.|.+...|..|+++|++  ++||.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~--~~~~~C~   44 (46)
T 2eoz_A            3 SGSSGTGEKPYSCNVCGKAFVLSAHLNQHLRVHTQ--ETLSGPS   44 (46)
T ss_dssp             SCCCCSSCCSEEETTTTEEESSHHHHHHHHHHHSS--CCSSSCC
T ss_pred             ccccCCCCCCeECcccChhhCCHHHHHHHHHHhCC--CCCCCCC
Confidence            66777777777777777777777777777777776  4677775

>1vd4_A Transcription initiation factor IIE, alpha subunit; zinc finger; NMR {Homo sapiens} SCOP: g.41.3.1

Probab=98.83  E-value=5.5e-11  Score=85.84  Aligned_cols=52  Identities=13%  Similarity=0.351  Sum_probs=26.7

Q ss_pred             HHHhhccCCCCCcccccccccccCCHHHHHHhHHhhccCCCceeCCCCCCcccchhhH
Q psy8169          35 RHLKIHDDKESKRFKCEQCDKRFSSNAELNKHSSAIHQRLKLHECDLCGKNFSQRNNL   92 (843)
Q Consensus        35 ~H~~~h~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~C~~C~~~f~~~~~l   92 (843)
                      .|+++|.+  ++||.|+.|++.|.....|.    .+|.+++||.|+.|++.|....++
T Consensus         4 ~h~~~H~~--~k~~~C~~C~k~F~~~~~l~----~~H~~~k~~~C~~C~k~f~~~~~~   55 (62)
T 1vd4_A            4 TDERDSTN--RASFKCPVCSSTFTDLEANQ----LFDPMTGTFRCTFCHTEVEEDESA   55 (62)
T ss_dssp             CCSSSCCS--SSEEECSSSCCEEEHHHHHH----HEETTTTEEBCSSSCCBCEECTTC
T ss_pred             hHHHHcCC--CCCccCCCCCchhccHHHhH----hhcCCCCCEECCCCCCccccCccc
Confidence            34455544  35555555555555544443    345555555555555555554443

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.82  E-value=1e-09  Score=73.77  Aligned_cols=45  Identities=22%  Similarity=0.227  Sum_probs=41.5

Q ss_pred             HHHhhccCCCCCcccccccccccCCHHHHHHhHHhhccCCCceeCCCC
Q psy8169          35 RHLKIHDDKESKRFKCEQCDKRFSSNAELNKHSSAIHQRLKLHECDLC   82 (843)
Q Consensus        35 ~H~~~h~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~C~~C   82 (843)
                      +|+++|.+  ++||.|+.|++.|.+...|..|+ ..|.+++||.|+.|
T Consensus         2 ~H~~~H~~--~k~~~C~~C~k~F~~~~~L~~H~-~~H~~~k~~~C~~C   46 (46)
T 2epw_A            2 SSGSSGTG--EKPCKCTECGKAFCWKSQLIMHQ-RTHVDDKHSGPSSG   46 (46)
T ss_dssp             CCCCCCCC--CCSEECSSSCCEESSSHHHHHHH-HHCCSCCCSCCCCC
T ss_pred             cCcccCCC--CCCeeCCCCCCccCCHHHHHHHH-HHhCCCCCCCCCCC
Confidence            47889987  58999999999999999999998 67999999999988

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.82  E-value=1.3e-09  Score=73.21  Aligned_cols=45  Identities=27%  Similarity=0.341  Sum_probs=41.2

Q ss_pred             HHHhhccCCCCCcccccccccccCCHHHHHHhHHhhccCCCceeCCCC
Q psy8169          35 RHLKIHDDKESKRFKCEQCDKRFSSNAELNKHSSAIHQRLKLHECDLC   82 (843)
Q Consensus        35 ~H~~~h~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~C~~C   82 (843)
                      .|+++|.+  ++||.|+.|++.|.+...|..|+ ..|.+++||.|++|
T Consensus         2 ~h~~~H~~--~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~~~~~C~~C   46 (46)
T 2enc_A            2 SSGSSGSG--EKPFKCEECGKGFYTNSQCYSHQ-RSHSGEKPSGPSSG   46 (46)
T ss_dssp             CCSSCCCC--CCSEECSSSCCEESSHHHHHHHH-HHSCCSSCCSSCCC
T ss_pred             CCCCCCCC--CCCcCCCCCCCcCCChHHHHHHH-HHhCCCCCCCCCCC
Confidence            37888987  59999999999999999999998 67999999999988

>2yso_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.82  E-value=1.3e-09  Score=73.29  Aligned_cols=45  Identities=18%  Similarity=0.228  Sum_probs=41.3

Q ss_pred             HHHhhccCCCCCcccccccccccCCHHHHHHhHHhhccCCCceeCCCC
Q psy8169          35 RHLKIHDDKESKRFKCEQCDKRFSSNAELNKHSSAIHQRLKLHECDLC   82 (843)
Q Consensus        35 ~H~~~h~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~C~~C   82 (843)
                      .|+++|.+  ++||.|+.|++.|.+...|..|+ ..|.+++||+|+.|
T Consensus         2 ~H~~~H~~--~~~~~C~~C~k~f~~~~~L~~H~-~~H~~~k~~~C~~C   46 (46)
T 2yso_A            2 SSGSSGSR--EKSHQCRECGEIFFQYVSLIEHQ-VLHMGQKNSGPSSG   46 (46)
T ss_dssp             CCSCCSSC--CCCEECTTTCCEESSHHHHHHHH-HHHSCCSCCCTTCC
T ss_pred             CcccccCC--CCCEEccccChhhCCHHHHHHHH-HHhCCCCCCCCCCC
Confidence            47888987  58999999999999999999998 67999999999988

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.82  E-value=9.5e-10  Score=73.91  Aligned_cols=45  Identities=22%  Similarity=0.352  Sum_probs=41.3

Q ss_pred             HHHhhccCCCCCcccccccccccCCHHHHHHhHHhhccCCCceeCCCC
Q psy8169          35 RHLKIHDDKESKRFKCEQCDKRFSSNAELNKHSSAIHQRLKLHECDLC   82 (843)
Q Consensus        35 ~H~~~h~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~C~~C   82 (843)
                      +|+++|.+  ++||.|+.|++.|.+...|..|+ ..|.+++||.|++|
T Consensus         2 ~H~~~H~~--~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~~~~~C~~~   46 (46)
T 2ep3_A            2 SSGSSGTG--EKPYRCAECGKAFTDRSNLFTHQ-KIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSSSSC--CCSEECSSSCCEESSHHHHHHHH-TTTTTSCCCCTTCC
T ss_pred             CCCCCCCC--CCCeECCCCCchhCCHHHHHHHH-HHcCCCCCCCCCCC
Confidence            58889988  59999999999999999999998 77999999999876

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.82  E-value=8.2e-10  Score=74.23  Aligned_cols=45  Identities=22%  Similarity=0.364  Sum_probs=41.7

Q ss_pred             HHHhhccCCCCCcccccccccccCCHHHHHHhHHhhccCCCceeCCCC
Q psy8169          35 RHLKIHDDKESKRFKCEQCDKRFSSNAELNKHSSAIHQRLKLHECDLC   82 (843)
Q Consensus        35 ~H~~~h~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~C~~C   82 (843)
                      +|+++|++  ++||.|++|++.|.+...|..|+ ..|.+++||.|++|
T Consensus         2 ~H~~~H~~--~~~~~C~~C~k~f~~~~~L~~H~-~~H~~~k~~~C~~C   46 (46)
T 2ytg_A            2 SSGSSGTG--EKPFKCGECGKSYNQRVHLTQHQ-RVHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCSS--CCSEECTTTCCEESSSHHHHTTG-GGGSSCCSSCSCCC
T ss_pred             CCCCCCCC--CCCeECCCCCcccCCHHHHHHHH-HHcCCCCCCCCCCC
Confidence            48888987  59999999999999999999998 78999999999988

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.82  E-value=8.8e-10  Score=72.38  Aligned_cols=41  Identities=22%  Similarity=0.350  Sum_probs=31.0

Q ss_pred             HHhhcCCCCccccccchhhcCCHHHHHHHHhhccCCCCCcccc
Q psy8169           8 HIKSHEYVENHMCELCYKVFESRENLMRHLKIHDDKESKRFKC   50 (843)
Q Consensus         8 h~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~C   50 (843)
                      |+++|+++++|.|++|++.|.+...|..|+++|.+  ++||.|
T Consensus         2 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~--~~~~~C   42 (42)
T 2ytb_A            2 SSGSSGGEKPYRCDQCGKAFSQKGSLIVHIRVHTG--SGPSSG   42 (42)
T ss_dssp             CCCCCCSCCSBCCTTTTCCBSSHHHHHTTGGGTSC--CSCCCC
T ss_pred             CccccCCCCCeeCCCccchhCCHHHHHHHHHHhCC--CCCCCC
Confidence            56777777777777777777777777777777776  467766

>2emb_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.82  E-value=1.2e-09  Score=72.63  Aligned_cols=42  Identities=21%  Similarity=0.296  Sum_probs=32.4

Q ss_pred             HHhhcCCCCccccccchhhcCCHHHHHHHHhhccCCCCCccccc
Q psy8169           8 HIKSHEYVENHMCELCYKVFESRENLMRHLKIHDDKESKRFKCE   51 (843)
Q Consensus         8 h~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~C~   51 (843)
                      |+++|+++++|.|++|++.|.+...|..|+++|.+  ++||.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~--~~~~~C~   44 (44)
T 2emb_A            3 SGSSGHTRKRYECSKCQATFNLRKHLIQHQKTHAA--KSGPSSG   44 (44)
T ss_dssp             CCSCCCCCSSEECTTTCCEESCHHHHHHHGGGGCC--CCCTTCC
T ss_pred             cccccCCCCCeECCCCCCccCCHHHHHHHHHHcCC--CCCcCCC
Confidence            66777788888888888888888888888888776  4777774

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.81  E-value=1.3e-09  Score=73.27  Aligned_cols=45  Identities=22%  Similarity=0.308  Sum_probs=41.4

Q ss_pred             HHHhhccCCCCCcccccccccccCCHHHHHHhHHhhccCCCceeCCCC
Q psy8169          35 RHLKIHDDKESKRFKCEQCDKRFSSNAELNKHSSAIHQRLKLHECDLC   82 (843)
Q Consensus        35 ~H~~~h~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~C~~C   82 (843)
                      +|+++|.+  +++|.|+.|++.|.+...|..|+ ..|.+++||.|++|
T Consensus         2 ~h~~~H~~--~~~~~C~~C~k~f~~~~~L~~H~-~~H~~~k~~~C~~C   46 (46)
T 2en6_A            2 SSGSSGSG--EKPYGCNECGKTFSQKSILSAHQ-RTHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSCCCCS--SCCEEETTTTEEESSHHHHHHHH-HHHSSCCCSSSCCC
T ss_pred             CCCCccCC--CcCeECCCCCcccCchHHHHHHH-HHcCCCCCCCCCCC
Confidence            47888988  59999999999999999999998 67999999999988

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.81  E-value=1.1e-09  Score=71.84  Aligned_cols=41  Identities=27%  Similarity=0.321  Sum_probs=33.3

Q ss_pred             HHhhcCCCCccccccchhhcCCHHHHHHHHhhccCCCCCcccc
Q psy8169           8 HIKSHEYVENHMCELCYKVFESRENLMRHLKIHDDKESKRFKC   50 (843)
Q Consensus         8 h~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~C   50 (843)
                      |+++|+++++|.|++|++.|.+...|..|+++|.+  ++||.|
T Consensus         2 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~--~~~~~C   42 (42)
T 2eos_A            2 SSGSSGGEKPYPCEICGTRFRHLQTLKSHLRIHTG--SGPSSG   42 (42)
T ss_dssp             CCSCCSSSCCBCCSSSCCCBSSHHHHHHHTTTTSC--CSSTTC
T ss_pred             CCcccCCCCCEECCCCCCccCCHHHHHHHHHhcCC--CCCCCC
Confidence            56778888888888888888888888888888877  477776

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens}

Probab=98.81  E-value=1.6e-09  Score=72.70  Aligned_cols=45  Identities=27%  Similarity=0.363  Sum_probs=41.3

Q ss_pred             HHHhhccCCCCCcccccccccccCCHHHHHHhHHhhccCCCceeCCCC
Q psy8169          35 RHLKIHDDKESKRFKCEQCDKRFSSNAELNKHSSAIHQRLKLHECDLC   82 (843)
Q Consensus        35 ~H~~~h~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~C~~C   82 (843)
                      +|+++|.+  ++||.|+.|++.|.+...|..|+ ..|.+++||.|++|
T Consensus         2 ~h~~~h~~--~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~~~~~C~~C   46 (46)
T 2el6_A            2 SSGSSGAG--VNPYKCSQCEKSFSGKLRLLVHQ-RMHTREKPSGPSSG   46 (46)
T ss_dssp             CSCCSSCC--CCSEECSSSSCEESSHHHHHHHH-GGGCCSSCCSCCCC
T ss_pred             CCCCCCCC--CCCeECCCCCcccCCHHHHHHHH-HHcCCCCCCCCCCC
Confidence            47788987  58999999999999999999998 77999999999988

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.81  E-value=1.2e-09  Score=73.37  Aligned_cols=42  Identities=26%  Similarity=0.262  Sum_probs=31.6

Q ss_pred             HHhhcCCCCccccccchhhcCCHHHHHHHHhhccCCCCCccccc
Q psy8169           8 HIKSHEYVENHMCELCYKVFESRENLMRHLKIHDDKESKRFKCE   51 (843)
Q Consensus         8 h~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~C~   51 (843)
                      |+++|+++++|.|++|++.|.+...|..|+++|.+  ++||.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~--~k~~~C~   44 (46)
T 2eq3_A            3 SGSSGTGEKPYECNQCGKAFSVRSSLTTHQAIHTG--KKPSGPS   44 (46)
T ss_dssp             CCCSSCCCCSSEETTTTEECSSHHHHHHHHTTSCC--CCCCCSC
T ss_pred             cccCCCCCCCeECCCCChhhCCHHHHHHHHHHhCC--CCCCCCC
Confidence            66777777777777777777777777777777776  4677775

>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A

Probab=98.81  E-value=1.3e-09  Score=71.60  Aligned_cols=41  Identities=22%  Similarity=0.203  Sum_probs=32.3

Q ss_pred             HHhhcCCCCccccccchhhcCCHHHHHHHHhhccCCCCCcccc
Q psy8169           8 HIKSHEYVENHMCELCYKVFESRENLMRHLKIHDDKESKRFKC   50 (843)
Q Consensus         8 h~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~C   50 (843)
                      |+++|+++++|.|++|++.|.+...|..|+++|.+  ++||.|
T Consensus         2 H~~~H~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~--~k~~~C   42 (42)
T 2epc_A            2 SSGSSGGETPYLCGQCGKSFTQRGSLAVHQRSCSQ--SGPSSG   42 (42)
T ss_dssp             CCSCCCSSCCEECSSSCCEESSHHHHHHHHHHTTC--CCCCCC
T ss_pred             CCccCCCCCCeECCCCCcccCCHHHHHHHhhhcCC--CCCCCC
Confidence            56778888888888888888888888888888876  477776

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.80  E-value=8.4e-10  Score=74.17  Aligned_cols=45  Identities=24%  Similarity=0.389  Sum_probs=41.5

Q ss_pred             HHHhhccCCCCCcccccccccccCCHHHHHHhHHhhccCCCceeCCCC
Q psy8169          35 RHLKIHDDKESKRFKCEQCDKRFSSNAELNKHSSAIHQRLKLHECDLC   82 (843)
Q Consensus        35 ~H~~~h~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~C~~C   82 (843)
                      +|+++|.+  ++||.|+.|++.|.+...|..|+ ..|.+++||.|+.|
T Consensus         2 ~H~~~H~~--~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~~~~~C~~C   46 (46)
T 2yu8_A            2 SSGSSGTG--EKPYKCNECGKVFTQNSHLARHR-RVHTGGKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCC--CSSEECSSSCCEESSSHHHHHHT-HHHHSCCCSCSCCC
T ss_pred             CcCcCCCC--CCCeECCcCCchhCCHHHHHHHH-HhcCCCCCCCCCCC
Confidence            47888988  59999999999999999999998 67999999999988

>1vd4_A Transcription initiation factor IIE, alpha subunit; zinc finger; NMR {Homo sapiens} SCOP: g.41.3.1

Probab=98.80  E-value=2.3e-10  Score=82.47  Aligned_cols=56  Identities=14%  Similarity=0.319  Sum_probs=48.5

Q ss_pred             HHHHHhhcCCCCccccccchhhcCCHHHHHHHHhhccCCCCCcccccccccccCCHHHHHH
Q psy8169           5 ISEHIKSHEYVENHMCELCYKVFESRENLMRHLKIHDDKESKRFKCEQCDKRFSSNAELNK   65 (843)
Q Consensus         5 l~~h~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~C~~C~~~f~~~~~l~~   65 (843)
                      |..|+++|+++++|.|+.|++.|.....|.   ++|.+  ++||.|+.|++.|....++..
T Consensus         2 L~~h~~~H~~~k~~~C~~C~k~F~~~~~l~---~~H~~--~k~~~C~~C~k~f~~~~~~~~   57 (62)
T 1vd4_A            2 IETDERDSTNRASFKCPVCSSTFTDLEANQ---LFDPM--TGTFRCTFCHTEVEEDESAMP   57 (62)
T ss_dssp             CCCCSSSCCSSSEEECSSSCCEEEHHHHHH---HEETT--TTEEBCSSSCCBCEECTTCSC
T ss_pred             hhhHHHHcCCCCCccCCCCCchhccHHHhH---hhcCC--CCCEECCCCCCccccCccccc
Confidence            456889999999999999999999999887   78987  599999999999987665443

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.80  E-value=1.8e-09  Score=73.03  Aligned_cols=46  Identities=22%  Similarity=0.252  Sum_probs=41.6

Q ss_pred             HHHhhccCCCCCcccccccccccCCHHHHHHhHHhhccCCCceeCCCC
Q psy8169          35 RHLKIHDDKESKRFKCEQCDKRFSSNAELNKHSSAIHQRLKLHECDLC   82 (843)
Q Consensus        35 ~H~~~h~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~C~~C   82 (843)
                      .|+++|.+  ++||.|+.|++.|.+...|..|++.+|.+++||.|+.|
T Consensus         2 ~H~~~H~~--~k~~~C~~C~k~F~~~~~L~~H~~~~H~~~k~~~C~~C   47 (47)
T 2epx_A            2 SSGSSGTG--KKPYECIECGKAFIQNTSLIRHWRYYHTGEKPSGPSSG   47 (47)
T ss_dssp             CCCCCCCC--CCSBCCSSSCCCBSSHHHHHHHHTTTTTTSCSSSCCCC
T ss_pred             ccccccCC--CCCEECCccCchhCChHHHHHHhHhhcCCCCCCCCCCC
Confidence            47888987  59999999999999999999998438999999999988

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.80  E-value=1.4e-09  Score=73.01  Aligned_cols=44  Identities=23%  Similarity=0.372  Sum_probs=40.7

Q ss_pred             HHhhccCCCCCcccccccccccCCHHHHHHhHHhhccCCCceeCCCC
Q psy8169          36 HLKIHDDKESKRFKCEQCDKRFSSNAELNKHSSAIHQRLKLHECDLC   82 (843)
Q Consensus        36 H~~~h~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~C~~C   82 (843)
                      |+++|.+  ++||.|+.|++.|.+...|..|+ ..|.+++||.|++|
T Consensus         3 h~~~h~~--~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~~~~~C~~C   46 (46)
T 2em8_A            3 SGSSGSG--EKPYKCVECGKGYKRRLDLDFHQ-RVHTGEKLSGPSSG   46 (46)
T ss_dssp             CCCCCCS--CCSEECSSSCCEESSHHHHHHHH-HHHHCCCCCCSCCC
T ss_pred             CCCCCCC--CCCeECcccCchhCCHHHHHHHH-HHHcCCCCCCCCCC
Confidence            6788887  59999999999999999999998 67999999999988

>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.79  E-value=1.1e-09  Score=72.70  Aligned_cols=42  Identities=21%  Similarity=0.296  Sum_probs=30.3

Q ss_pred             HHhhcCCCCccccccchhhcCCHHHHHHHHhhccCCCCCccccc
Q psy8169           8 HIKSHEYVENHMCELCYKVFESRENLMRHLKIHDDKESKRFKCE   51 (843)
Q Consensus         8 h~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~C~   51 (843)
                      |+++|+++++|.|++|++.|.....|..|+++|++  ++||.|.
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~--~~~~~C~   44 (44)
T 2yu5_A            3 SGSSGAGENPFKCSKCDRVFTQRNYLVQHERTHAR--KSGPSSG   44 (44)
T ss_dssp             CSCCCSCCCSEECSSSSCEESSSHHHHHHHHHCCC--CCSSCCC
T ss_pred             CccccCCCCCeECCCCCchhCCHHHHHHHhHhcCC--CCCCCCC
Confidence            56677777777777777777777777777777766  4677663

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.79  E-value=1e-09  Score=72.09  Aligned_cols=41  Identities=24%  Similarity=0.208  Sum_probs=32.3

Q ss_pred             HHhhcCCCCccccccchhhcCCHHHHHHHHhhccCCCCCcccc
Q psy8169           8 HIKSHEYVENHMCELCYKVFESRENLMRHLKIHDDKESKRFKC   50 (843)
Q Consensus         8 h~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~C   50 (843)
                      |+++|+++++|.|++|++.|.+...|..|+++|.+  ++||.|
T Consensus         2 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~--~~~~~C   42 (42)
T 2en2_A            2 SSGSSGGEKPYKCETCGARFVQVAHLRAHVLIHTG--SGPSSG   42 (42)
T ss_dssp             CCCCCCSSCSEECTTTCCEESSHHHHHHHTHHHHS--CCSSCC
T ss_pred             CCcccCCCCCEeCCCcChhhCCHHHHHHHHHHcCC--CCCCCC
Confidence            56778888888888888888888888888888876  477776

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.78  E-value=1.2e-09  Score=73.43  Aligned_cols=42  Identities=26%  Similarity=0.303  Sum_probs=30.9

Q ss_pred             HHhhcCCCCccccccchhhcCCHHHHHHHHhhccCCCCCccccc
Q psy8169           8 HIKSHEYVENHMCELCYKVFESRENLMRHLKIHDDKESKRFKCE   51 (843)
Q Consensus         8 h~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~C~   51 (843)
                      |+++|.++++|.|++|++.|.....|..|+++|.+  ++||.|+
T Consensus         3 h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~--~k~~~C~   44 (46)
T 2emz_A            3 SGSSGSGERPFKCNECGKGFGRRSHLAGHLRLHSR--EKSSGPS   44 (46)
T ss_dssp             CCSCSSCCCSCCCSSSCCCCSSHHHHHHHHHHHHH--TTCCCSC
T ss_pred             CCcCCCCCCCeECCCCCcccCCHHHHHHHHHHhCC--CCCCCCC
Confidence            56677777777777777777777777777777776  4677775

>2eou_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.78  E-value=2e-09  Score=71.46  Aligned_cols=42  Identities=19%  Similarity=0.266  Sum_probs=33.1

Q ss_pred             HHhhcCCCCccccccchhhcCCHHHHHHHHhhccCCCCCccccc
Q psy8169           8 HIKSHEYVENHMCELCYKVFESRENLMRHLKIHDDKESKRFKCE   51 (843)
Q Consensus         8 h~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~C~   51 (843)
                      |+++|.++++|.|++|++.|.+...|..|+++|.+  ++||.|+
T Consensus         3 h~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~--~k~~~C~   44 (44)
T 2eou_A            3 SGSSGAAKTTSECQECGKIFRHSSLLIEHQALHAG--ESGPSSG   44 (44)
T ss_dssp             CSCSCSSSCCCCCTTTCCCCSSHHHHHHHHHHHTT--SCCCCCC
T ss_pred             CCCCCCCCcCeECCCCCcccCCHHHHHHHHHHHCC--CCCCCCC
Confidence            56778888888888888888888888888888876  4778774

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.78  E-value=1.5e-09  Score=72.94  Aligned_cols=42  Identities=21%  Similarity=0.328  Sum_probs=32.3

Q ss_pred             HHhhcCCCCccccccchhhcCCHHHHHHHHhhccCCCCCccccc
Q psy8169           8 HIKSHEYVENHMCELCYKVFESRENLMRHLKIHDDKESKRFKCE   51 (843)
Q Consensus         8 h~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~C~   51 (843)
                      |+++|+++++|.|++|++.|.+...|..|+++|.+  ++||.|+
T Consensus         3 h~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~--~k~~~C~   44 (46)
T 2enh_A            3 SGSSGTGEKPYECDVCRKAFSHHASLTQHQRVHSG--EKPSGPS   44 (46)
T ss_dssp             CCCCCCCSSSCBCTTTCCBCSSSHHHHHHGGGSCC--SCCCCCC
T ss_pred             CCCCcCCCCCcCCCCcCchhCCHHHHHHHHHHhCC--CCCCCCC
Confidence            56777778888888888888888888888887776  4777775

>2eoy_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.78  E-value=1.1e-09  Score=73.55  Aligned_cols=43  Identities=23%  Similarity=0.288  Sum_probs=26.9

Q ss_pred             HHhhcCCCCccccccchhhcCCHHHHHHHHhhccCCCCCccccc
Q psy8169           8 HIKSHEYVENHMCELCYKVFESRENLMRHLKIHDDKESKRFKCE   51 (843)
Q Consensus         8 h~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~C~   51 (843)
                      |+++|+++++|.|++|++.|.+...|..|+++|.+. ++||.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~-~~~~~C~   45 (46)
T 2eoy_A            3 SGSSGQKEKCFKCNKCEKTFSCSKYLTQHERIHTRG-VKSGPSS   45 (46)
T ss_dssp             CCCCCCCSCCEECSSSCCEESSSHHHHHHHTTCCSC-CTTSSSC
T ss_pred             CccccCCCCCEECcCCCCcCCCHHHHHHHHHHcCCC-CCCCCCC
Confidence            556666666666666666666666666666666541 2566664

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.76  E-value=2.6e-09  Score=71.64  Aligned_cols=45  Identities=29%  Similarity=0.378  Sum_probs=40.8

Q ss_pred             HHHhhccCCCCCcccccccccccCCHHHHHHhHHhhccCCCceeCCCC
Q psy8169          35 RHLKIHDDKESKRFKCEQCDKRFSSNAELNKHSSAIHQRLKLHECDLC   82 (843)
Q Consensus        35 ~H~~~h~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~C~~C   82 (843)
                      .|+++|.+  +++|.|+.|++.|.+...|..|+ ..|.+++||.|+.|
T Consensus         2 ~H~~~H~~--~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~k~~~C~~~   46 (46)
T 2em2_A            2 SSGSSGSG--EKPFKCKECGKAFRQNIHLASHL-RIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCSCCC--CCSEECSSSCCEESSHHHHHHHH-HHHCCCCSSCSSCC
T ss_pred             CCCCCCCC--CCCEECCcCCchhCCHHHHHHHH-HHhCCCCCCCCCCC
Confidence            37888987  59999999999999999999998 67999999999875

>2yrm_A B-cell lymphoma 6 protein; ZF-C2H2, zinc binding, DNA binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=98.73  E-value=5.8e-09  Score=68.63  Aligned_cols=41  Identities=17%  Similarity=0.185  Sum_probs=32.1

Q ss_pred             hhcCCCCccccccchhhcCCHHHHHHHHhhccCCCCCcccccc
Q psy8169          10 KSHEYVENHMCELCYKVFESRENLMRHLKIHDDKESKRFKCEQ   52 (843)
Q Consensus        10 ~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~C~~   52 (843)
                      ++|+++++|.|++|++.|.+...|..|+++|++  ++||.|++
T Consensus         3 ~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~--~k~~~C~~   43 (43)
T 2yrm_A            3 SGSSGNGAFFCNECDCRFSEEASLKRHTLQTHS--DKSGPSSG   43 (43)
T ss_dssp             SCCSSSCCBCCSSSCCCBSSHHHHHHHHHHHTC--TTCSSSCC
T ss_pred             cCcCCCCCEECCCCCCeeCChHHHHHHHHhhCC--CCCccCCC
Confidence            467788888888888888888888888888877  47887763

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.73  E-value=1.3e-09  Score=73.29  Aligned_cols=42  Identities=19%  Similarity=0.214  Sum_probs=28.5

Q ss_pred             HHhhcCCCCccccccchhhcCCHHHHHHHHhhccCCCCCccccc
Q psy8169           8 HIKSHEYVENHMCELCYKVFESRENLMRHLKIHDDKESKRFKCE   51 (843)
Q Consensus         8 h~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~C~   51 (843)
                      |+++|+++++|.|++|++.|.+...|..|+++|.+  ++||.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~--~~~~~C~   44 (46)
T 2en3_A            3 SGSSGTGEKPFQCKECGMNFSWSCSLFKHLRSHER--TDPSGPS   44 (46)
T ss_dssp             CCCCSCCCCSEECSSSCCEESSSHHHHHHHHHHHH--SCCSSCS
T ss_pred             cccccCCCCCeeCcccChhhCCHHHHHHHHHHhCC--CCCCCCC
Confidence            56667777777777777777777777777777665  3666664

>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.72  E-value=3.2e-09  Score=72.10  Aligned_cols=44  Identities=20%  Similarity=0.157  Sum_probs=33.4

Q ss_pred             HHhhcCCCCccccc--cchhhcCCHHHHHHHHhhccCCCCCccccccc
Q psy8169           8 HIKSHEYVENHMCE--LCYKVFESRENLMRHLKIHDDKESKRFKCEQC   53 (843)
Q Consensus         8 h~~~h~~~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~~~~C~~C   53 (843)
                      |.++|+++++|.|.  .|++.|.....|..|+++|.+  ++||.|+.|
T Consensus         3 ~~~~H~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~--~k~~~C~~C   48 (48)
T 2ent_A            3 SGSSGTGEKPFACTWPGCGWRFSRSDELSRHRRSHSG--VKPSGPSSG   48 (48)
T ss_dssp             CCCSSCCCCCEECCSSSCCCEESSHHHHHHHHTTSCC--CCSCSSCCC
T ss_pred             CCCCcCCCCCeECCCCCCCCccCCHHHHHHHHHHhCC--CCCCCCCCC
Confidence            45677777888887  788888888888888887776  477877776

>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.72  E-value=1.6e-09  Score=71.93  Aligned_cols=41  Identities=27%  Similarity=0.270  Sum_probs=27.2

Q ss_pred             HHhhcCCCCccccccchhhcCCHHHHHHHHhhccCCCCCcccc
Q psy8169           8 HIKSHEYVENHMCELCYKVFESRENLMRHLKIHDDKESKRFKC   50 (843)
Q Consensus         8 h~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~C   50 (843)
                      |+++|+++++|.|++|++.|.+...|..|+++|.+  ++||.|
T Consensus         3 H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~--~~~~~C   43 (44)
T 2eox_A            3 SGSSGTDSKSYNCNECGKAFTRIFHLTRHQKIHTR--KSGPSS   43 (44)
T ss_dssp             CCCCCCCCCCEEETTTTEEESSSHHHHTTHHHHCC--CCCCSC
T ss_pred             CCcCCCCCCCeECcccCcccCCHHHHHHHHHHhCC--CCCCCC
Confidence            55666666666666666666666666666666665  366665

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.72  E-value=3.8e-09  Score=70.00  Aligned_cols=41  Identities=20%  Similarity=0.148  Sum_probs=29.0

Q ss_pred             HHhhcCCCCccccccchhhcCCHHHHHHHHhhccCCCCCcccc
Q psy8169           8 HIKSHEYVENHMCELCYKVFESRENLMRHLKIHDDKESKRFKC   50 (843)
Q Consensus         8 h~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~C   50 (843)
                      |+++|+++++|.|++|++.|.....|..|+++|++  ++||.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~--~k~~~~   43 (44)
T 2epv_A            3 SGSSGSGEKPYECNECGKAFIWKSLLIVHERTHAG--VSGPSS   43 (44)
T ss_dssp             CCCCCCCCCSEECSSSCCEESSHHHHHHHHGGGSS--CSCCCC
T ss_pred             CCcccCCCcCeECCCCCcccCchHHHHHHHhHhcC--CCCCCC
Confidence            56677777777777777777777777777777766  466665

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.71  E-value=6.1e-09  Score=69.79  Aligned_cols=41  Identities=27%  Similarity=0.331  Sum_probs=31.0

Q ss_pred             HhhcCCCCccccccchhhcCCHHHHHHHHhhccCCCCCccccc
Q psy8169           9 IKSHEYVENHMCELCYKVFESRENLMRHLKIHDDKESKRFKCE   51 (843)
Q Consensus         9 ~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~C~   51 (843)
                      +++|+++++|.|++|++.|.+...|..|+++|++  ++||.|+
T Consensus         4 ~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~--~k~~~C~   44 (46)
T 2eom_A            4 GSSGHGERGHRCSDCGKFFLQASNFIQHRRIHTG--EKPSGPS   44 (46)
T ss_dssp             CCCCCCCSSCCCSSSCCCCSSHHHHHHHHHHHSS--CCCSSCC
T ss_pred             CCCCCCCCCcCCCCCCCeeCChHHHHHHHHHhCC--CCCCCCC
Confidence            4567777778888888888888888888777776  4777775

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.70  E-value=4e-09  Score=70.34  Aligned_cols=41  Identities=27%  Similarity=0.348  Sum_probs=30.5

Q ss_pred             HhhcCCCCccccccchhhcCCHHHHHHHHhhccCCCCCccccc
Q psy8169           9 IKSHEYVENHMCELCYKVFESRENLMRHLKIHDDKESKRFKCE   51 (843)
Q Consensus         9 ~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~C~   51 (843)
                      .++|+++++|.|++|++.|.....|..|+++|.+  ++||.|+
T Consensus         4 ~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~--~k~~~C~   44 (45)
T 2epu_A            4 GSSGTGQKPFECTHCGKSFRAKGNLVTHQRIHTG--EKSGPSS   44 (45)
T ss_dssp             CCCCCSCCSEEETTTTEEESSHHHHHHHHTTTSS--CCCCCSC
T ss_pred             CCCCCCCcCccCCCCCCccCChHHHHHHHHHhCC--CCCCCCC
Confidence            4567777777777777777777777777777776  4777775

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A

Probab=98.70  E-value=5.4e-09  Score=68.51  Aligned_cols=42  Identities=17%  Similarity=0.317  Sum_probs=38.3

Q ss_pred             HHhhccCCCCCcccccccccccCCHHHHHHhHHhhccCCCceeCC
Q psy8169          36 HLKIHDDKESKRFKCEQCDKRFSSNAELNKHSSAIHQRLKLHECD   80 (843)
Q Consensus        36 H~~~h~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~C~   80 (843)
                      |+++|.+  ++||.|+.|++.|.+...|..|+ ..|.+++||.|+
T Consensus         1 H~~~H~~--~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~~~~~C~   42 (42)
T 2el5_A            1 GSSGSSG--ENPYECSECGKAFNRKDQLISHQ-RTHAGESGPSSG   42 (42)
T ss_dssp             CCSSSSS--CCSEECSSSCCEESSHHHHHHHH-GGGCCCCSCCCC
T ss_pred             CCCCCCC--CCCccCCCcChhhCCHHHHHHHH-HhcCCCCCCCCC
Confidence            6788887  59999999999999999999998 779999999985

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.69  E-value=5.5e-09  Score=70.05  Aligned_cols=44  Identities=18%  Similarity=0.268  Sum_probs=40.0

Q ss_pred             HHHhhccCCCCCcccccccccccCCHHHHHHhHHhhccCCCceeCCC
Q psy8169          35 RHLKIHDDKESKRFKCEQCDKRFSSNAELNKHSSAIHQRLKLHECDL   81 (843)
Q Consensus        35 ~H~~~h~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~C~~   81 (843)
                      .|+++|.+  ++||.|+.|++.|.+...|..|+ ..|.+++||.|++
T Consensus         2 ~H~~~H~~--~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~k~~~C~~   45 (46)
T 2em4_A            2 SSGSSGTG--QRPYECIECGKAFKTKSSLICHR-RSHTGEKPSGPSS   45 (46)
T ss_dssp             CSCCCCCC--SSSEECSSSCCEESSHHHHHHHH-HHHSSSSCCCCCC
T ss_pred             CCccccCC--CcCcCCCCCCCccCCHHHHHHHH-HhcCCCCCCCCCC
Confidence            47889988  59999999999999999999998 6799999999974

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.69  E-value=6.3e-09  Score=69.79  Aligned_cols=44  Identities=27%  Similarity=0.426  Sum_probs=40.0

Q ss_pred             HHHhhccCCCCCcccccccccccCCHHHHHHhHHhhccCCCceeCCC
Q psy8169          35 RHLKIHDDKESKRFKCEQCDKRFSSNAELNKHSSAIHQRLKLHECDL   81 (843)
Q Consensus        35 ~H~~~h~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~C~~   81 (843)
                      +|+++|.+  ++||.|+.|++.|.....|..|+ ..|.+++||.|++
T Consensus         2 ~H~~~H~~--~k~~~C~~C~k~F~~~~~L~~H~-~~H~~~k~~~C~~   45 (46)
T 2enf_A            2 SSGSSGTG--EKPYKCNECGKVFTQNSHLVRHR-GIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCC--CCSCBCSSSCCBCSSHHHHHHHH-TTTTTSSCCCCSC
T ss_pred             CCCcCCCC--CcCeECCCCCcccCCHHHHHHHH-HhhCCCCCCCCCC
Confidence            47888987  59999999999999999999998 7899999999974

>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.69  E-value=6.6e-09  Score=68.10  Aligned_cols=42  Identities=21%  Similarity=0.386  Sum_probs=38.1

Q ss_pred             HHhhccCCCCCcccccccccccCCHHHHHHhHHhhccCCCceeCC
Q psy8169          36 HLKIHDDKESKRFKCEQCDKRFSSNAELNKHSSAIHQRLKLHECD   80 (843)
Q Consensus        36 H~~~h~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~C~   80 (843)
                      |+++|.+  ++||.|+.|++.|.+...|..|+ ..|.+++||.|.
T Consensus         1 H~~~H~~--~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~~~~~C~   42 (42)
T 2yte_A            1 GSSGSSG--EKPYSCAECKETFSDNNRLVQHQ-KMHTVKSGPSSG   42 (42)
T ss_dssp             CCSSSCS--CCSCBCTTTCCBCSSHHHHHHHH-HHTSCCSSCCCC
T ss_pred             CCcCcCC--CCCeECCCCCCccCCHHHHHHHH-HHhCCCCCCCCC
Confidence            6778887  58999999999999999999998 679999999985

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A

Probab=98.68  E-value=5.3e-09  Score=70.11  Aligned_cols=44  Identities=27%  Similarity=0.400  Sum_probs=39.9

Q ss_pred             HHHhhccCCCCCcccccccccccCCHHHHHHhHHhhccCCCceeCCC
Q psy8169          35 RHLKIHDDKESKRFKCEQCDKRFSSNAELNKHSSAIHQRLKLHECDL   81 (843)
Q Consensus        35 ~H~~~h~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~C~~   81 (843)
                      .|+++|.+  ++||.|+.|++.|.+...|..|+ ..|.+++||.|++
T Consensus         2 ~H~~~H~~--~k~~~C~~C~k~F~~~~~L~~H~-~~H~~~k~~~C~~   45 (46)
T 2emj_A            2 SSGSSGTG--EKPFECAECGKSFSISSQLATHQ-RIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCC--CCSEECSSSSCEESSHHHHHHHH-HHHTTSCSSSSCC
T ss_pred             CCCCCCCC--CCCEECCCCCcccCCHHHHHHHH-HHhCCCCCCCCCC
Confidence            47889987  59999999999999999999998 6799999999974

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.68  E-value=6e-09  Score=69.84  Aligned_cols=44  Identities=20%  Similarity=0.351  Sum_probs=40.1

Q ss_pred             HHHhhccCCCCCcccccccccccCCHHHHHHhHHhhccCCCceeCCC
Q psy8169          35 RHLKIHDDKESKRFKCEQCDKRFSSNAELNKHSSAIHQRLKLHECDL   81 (843)
Q Consensus        35 ~H~~~h~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~C~~   81 (843)
                      +|+++|.+  ++||.|+.|++.|.+...|..|+ ..|.+++||.|+.
T Consensus         2 ~H~~~H~~--~k~~~C~~C~k~F~~~~~L~~H~-~~H~~~k~~~C~~   45 (46)
T 2ytp_A            2 SSGSSGTG--ERHYECSECGKAFARKSTLIMHQ-RIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCSSCC--CCCEECSSSCCEESSHHHHHHHH-TTTSCCCCCSSCC
T ss_pred             CcccCcCC--CCCeECCcCCcccCCHHHHHHHH-HHhCCCCCCCCCC
Confidence            47889987  59999999999999999999998 7799999999974

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.68  E-value=7.1e-09  Score=69.50  Aligned_cols=44  Identities=25%  Similarity=0.375  Sum_probs=40.0

Q ss_pred             HHHhhccCCCCCcccccccccccCCHHHHHHhHHhhccCCCceeCCC
Q psy8169          35 RHLKIHDDKESKRFKCEQCDKRFSSNAELNKHSSAIHQRLKLHECDL   81 (843)
Q Consensus        35 ~H~~~h~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~C~~   81 (843)
                      +|+++|.+  ++||.|+.|++.|.+...|..|+ ..|.+++||.|+.
T Consensus         2 ~H~~~H~~--~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~k~~~C~~   45 (46)
T 2em6_A            2 SSGSSGMG--EKCYKCDVCGKEFSQSSHLQTHQ-RVHTGEKPSGPSS   45 (46)
T ss_dssp             CCCSCCCC--CCCCBCSSSCCBCSSHHHHHHHH-TTTSSSCCCCTTC
T ss_pred             CCccccCC--CCCeECCCCCcccCCHHHHHHHH-HHcCCCCCCCCCC
Confidence            47888987  59999999999999999999998 7899999999974

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.68  E-value=6.9e-09  Score=69.59  Aligned_cols=44  Identities=20%  Similarity=0.303  Sum_probs=39.9

Q ss_pred             HHHhhccCCCCCcccccccccccCCHHHHHHhHHhhccCCCceeCCC
Q psy8169          35 RHLKIHDDKESKRFKCEQCDKRFSSNAELNKHSSAIHQRLKLHECDL   81 (843)
Q Consensus        35 ~H~~~h~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~C~~   81 (843)
                      .|+++|.+  ++||.|+.|++.|.+...|..|+ ..|.+++||.|++
T Consensus         2 ~H~~~H~~--~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~~~~~C~~   45 (46)
T 2emg_A            2 SSGSSGTG--ENPFICSECGKVFTHKTNLIIHQ-KIHTGERPSGPSS   45 (46)
T ss_dssp             CCCCCCCS--CCSCBCTTTCCBCSSHHHHHHHH-TTTSCCCCSCSCC
T ss_pred             CCCCCCCC--CCCEECCccCcccCCHHHHHHHH-HHhCCCCCCCCCC
Confidence            47888987  58999999999999999999998 7899999999974

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.67  E-value=6.7e-09  Score=69.66  Aligned_cols=44  Identities=27%  Similarity=0.440  Sum_probs=40.0

Q ss_pred             HHHhhccCCCCCcccccccccccCCHHHHHHhHHhhccCCCceeCCC
Q psy8169          35 RHLKIHDDKESKRFKCEQCDKRFSSNAELNKHSSAIHQRLKLHECDL   81 (843)
Q Consensus        35 ~H~~~h~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~C~~   81 (843)
                      +|+++|.+  ++||.|+.|++.|.+...|..|+ ..|.+++||.|++
T Consensus         2 ~H~~~H~~--~k~~~C~~C~k~F~~~~~L~~H~-~~H~~~k~~~C~~   45 (46)
T 2yti_A            2 SSGSSGTG--EKPYKCNECGKVFTQNSHLARHR-GIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCSC--CCTTCCSSSCCCCSSHHHHHHHH-TTTSCSCCSSTTC
T ss_pred             CCCcCCCC--CcCeECCCCCcccCChhHHHHHh-HhcCCCCCCCCCC
Confidence            47888987  59999999999999999999998 7899999999974

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.67  E-value=8.2e-09  Score=69.25  Aligned_cols=44  Identities=20%  Similarity=0.344  Sum_probs=40.0

Q ss_pred             HHHhhccCCCCCcccccccccccCCHHHHHHhHHhhccCCCceeCCC
Q psy8169          35 RHLKIHDDKESKRFKCEQCDKRFSSNAELNKHSSAIHQRLKLHECDL   81 (843)
Q Consensus        35 ~H~~~h~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~C~~   81 (843)
                      +|+++|.+  +++|.|+.|++.|.+...|..|+ ..|.+++||.|+.
T Consensus         2 ~H~~~H~~--~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~k~~~C~~   45 (46)
T 2ep1_A            2 SSGSSGTG--EKPYECSDCGKSFIKKSQLHVHQ-RIHTGENPSGPSS   45 (46)
T ss_dssp             CCCCCCSS--CCSSCCSSSCCCCSSHHHHHHHH-GGGSSSCCCSSSC
T ss_pred             ccccCCCC--CCCcCCCCCCchhCCHHHHHHHH-HHhCCCCCCCCCC
Confidence            47888987  58999999999999999999998 6799999999974

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.67  E-value=7.2e-09  Score=69.48  Aligned_cols=44  Identities=25%  Similarity=0.344  Sum_probs=39.6

Q ss_pred             HHhhccCCCCCcccccccccccCCHHHHHHhHHhhccCCCceeCCCC
Q psy8169          36 HLKIHDDKESKRFKCEQCDKRFSSNAELNKHSSAIHQRLKLHECDLC   82 (843)
Q Consensus        36 H~~~h~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~C~~C   82 (843)
                      ++++|.+  +++|.|+.|++.|.+...|..|+ ..|.+++||.|++|
T Consensus         3 ~~~~h~~--~~~~~C~~C~k~f~~~~~L~~H~-~~H~~~k~~~C~~C   46 (46)
T 2ep0_A            3 SGSSGTG--EKPYKCDVCHKSFRYGSSLTVHQ-RIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSSTT--CCSEECSSSCCEESSHHHHHHHH-TTTSSSCCCSCCCC
T ss_pred             CCCCCCC--CCCeeCcccCcccCChHHHHHHH-HHhCCCCCCCCCCC
Confidence            3567777  58999999999999999999998 77999999999988

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.67  E-value=7.2e-09  Score=69.49  Aligned_cols=44  Identities=23%  Similarity=0.414  Sum_probs=40.0

Q ss_pred             HHHhhccCCCCCcccccccccccCCHHHHHHhHHhhccCCCceeCCC
Q psy8169          35 RHLKIHDDKESKRFKCEQCDKRFSSNAELNKHSSAIHQRLKLHECDL   81 (843)
Q Consensus        35 ~H~~~h~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~C~~   81 (843)
                      +|+++|.+  ++||.|+.|++.|.+...|..|+ .+|.+++||.|+.
T Consensus         2 ~H~~~H~~--~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~k~~~C~~   45 (46)
T 2eq2_A            2 SSGSSGTG--GKPYQCNECGKAFSQTSKLARHQ-RVHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCSSSS--SCSSSCCSSCCCCSSHHHHHHHG-GGGCCCCCCCCCC
T ss_pred             CcccccCC--CCCeECCCCCcccCCHHHHHHHH-HHcCCCCCCCCCC
Confidence            47889987  59999999999999999999998 7799999999974

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.67  E-value=6.7e-09  Score=69.68  Aligned_cols=44  Identities=25%  Similarity=0.365  Sum_probs=40.0

Q ss_pred             HHHhhccCCCCCcccccccccccCCHHHHHHhHHhhccCCCceeCCC
Q psy8169          35 RHLKIHDDKESKRFKCEQCDKRFSSNAELNKHSSAIHQRLKLHECDL   81 (843)
Q Consensus        35 ~H~~~h~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~C~~   81 (843)
                      +|+++|.+  ++||.|+.|++.|.+...|..|+ ..|.+++||.|++
T Consensus         2 ~H~~~H~~--~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~k~~~C~~   45 (46)
T 2eow_A            2 SSGSSGTG--EKPYKCNECGKAFRARSSLAIHQ-ATHSGEKPSGPSS   45 (46)
T ss_dssp             CCCCCSCC--CCCEECTTSCCEESSHHHHHHHH-HHHCCCSCSCTTC
T ss_pred             CccCCCCC--CCCeeccccCChhcCHHHHHHHH-HHcCCCCCCCCCC
Confidence            47888987  59999999999999999999998 6799999999974

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.67  E-value=7.1e-09  Score=69.56  Aligned_cols=44  Identities=23%  Similarity=0.345  Sum_probs=39.9

Q ss_pred             HHHhhccCCCCCcccccccccccCCHHHHHHhHHhhccCCCceeCCC
Q psy8169          35 RHLKIHDDKESKRFKCEQCDKRFSSNAELNKHSSAIHQRLKLHECDL   81 (843)
Q Consensus        35 ~H~~~h~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~C~~   81 (843)
                      +|+++|.+  ++||.|+.|++.|.+...|..|+ ..|.+++||.|++
T Consensus         2 ~H~~~H~~--~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~k~~~C~~   45 (46)
T 2ytf_A            2 SSGSSGTG--EKPFECSECQKAFNTKSNLIVHQ-RTHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCSSCC--CCSEECSSSCCEESSHHHHHHHH-HTSCSSSSSCCCC
T ss_pred             CCCCCCCC--CCCcCCCCCCcccCCHHHHHHHH-HHhCCCCCCCCCC
Confidence            47888987  59999999999999999999998 6799999999974

>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.66  E-value=9.8e-09  Score=66.77  Aligned_cols=39  Identities=23%  Similarity=0.277  Sum_probs=31.0

Q ss_pred             hhcCCCCccccccchhhcCCHHHHHHHHhhccCCCCCcccc
Q psy8169          10 KSHEYVENHMCELCYKVFESRENLMRHLKIHDDKESKRFKC   50 (843)
Q Consensus        10 ~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~C   50 (843)
                      ++|+++++|.|++|++.|.....|..|+++|++  ++||.|
T Consensus         3 ~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~--~k~~~C   41 (41)
T 2ept_A            3 SGSSGQRVYECQECGKSFRQKGSLTLHERIHTG--SGPSSG   41 (41)
T ss_dssp             SSCCCCCCEECSSSCCEESSHHHHHHHGGGCCC--CSCSCC
T ss_pred             CccCCCCCeECCCCCCCcCCHHHHHHHHHHhCC--CCCcCC
Confidence            467788888888888888888888888888877  477776

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.66  E-value=7.1e-09  Score=68.74  Aligned_cols=43  Identities=19%  Similarity=0.300  Sum_probs=39.2

Q ss_pred             HHHhhccCCCCCcccccccccccCCHHHHHHhHHhhccCCCceeCC
Q psy8169          35 RHLKIHDDKESKRFKCEQCDKRFSSNAELNKHSSAIHQRLKLHECD   80 (843)
Q Consensus        35 ~H~~~h~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~C~   80 (843)
                      .|+++|.+  ++||.|++|++.|.+...|..|+ ..|.++++|.|+
T Consensus         2 ~H~~~H~~--~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~~~~~C~   44 (44)
T 2eoj_A            2 SSGSSGTG--ENPYECCECGKVFSRKDQLVSHQ-KTHSGQSGPSSG   44 (44)
T ss_dssp             CSCCSSSS--CCSCEETTTTEECSSHHHHHHHH-TTSSSSCSCCCC
T ss_pred             CCccccCC--CcCeeCCCCCCccCCHHHHHHHH-HHcCCCCCCCCC
Confidence            47889988  58999999999999999999998 779999999985

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.66  E-value=7.4e-09  Score=69.44  Aligned_cols=44  Identities=23%  Similarity=0.357  Sum_probs=40.0

Q ss_pred             HHHhhccCCCCCcccccccccccCCHHHHHHhHHhhccCCCceeCCC
Q psy8169          35 RHLKIHDDKESKRFKCEQCDKRFSSNAELNKHSSAIHQRLKLHECDL   81 (843)
Q Consensus        35 ~H~~~h~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~C~~   81 (843)
                      +|+++|.+  ++||.|+.|++.|.+...|..|+ ..|.+++||.|++
T Consensus         2 ~H~~~H~~--~~~~~C~~C~k~F~~~~~L~~H~-~~H~~~~~~~C~~   45 (46)
T 2em3_A            2 SSGSSGTG--EKPYECKVCSKAFTQKAHLAQHQ-KTHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCSS--CCSEECSSSCCEESSHHHHHHHH-HHHCCCCCCCSCC
T ss_pred             CCCCCCCC--CcCeECCCCCcccCCHHHHHHHH-HHhCCCCCCCCCC
Confidence            47888987  59999999999999999999998 6799999999974

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.66  E-value=7.8e-09  Score=69.31  Aligned_cols=44  Identities=25%  Similarity=0.416  Sum_probs=40.0

Q ss_pred             HHHhhccCCCCCcccccccccccCCHHHHHHhHHhhccCCCceeCCC
Q psy8169          35 RHLKIHDDKESKRFKCEQCDKRFSSNAELNKHSSAIHQRLKLHECDL   81 (843)
Q Consensus        35 ~H~~~h~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~C~~   81 (843)
                      .|+++|.+  ++||.|+.|++.|.+...|..|+ ..|.+++||.|+.
T Consensus         2 ~H~~~H~~--~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~k~~~C~~   45 (46)
T 2eq1_A            2 SSGSSGTG--EKPYKCNECGKAFRAHSNLTTHQ-VIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCC--SCCCCCTTTTCCCSSHHHHHHHH-TTTCCSCCSSCCC
T ss_pred             CcccccCC--CCCeECCcCChhhCCHHHHHHHH-HHhCCCCCCCCCC
Confidence            48889987  59999999999999999999998 7899999999974

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.66  E-value=8.6e-09  Score=69.11  Aligned_cols=44  Identities=20%  Similarity=0.371  Sum_probs=39.9

Q ss_pred             HHHhhccCCCCCcccccccccccCCHHHHHHhHHhhccCCCceeCCC
Q psy8169          35 RHLKIHDDKESKRFKCEQCDKRFSSNAELNKHSSAIHQRLKLHECDL   81 (843)
Q Consensus        35 ~H~~~h~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~C~~   81 (843)
                      .|+++|.+  +++|.|+.|++.|.+...|..|+ ..|.+++||.|+.
T Consensus         2 ~H~~~H~~--~~~~~C~~C~k~F~~~~~L~~H~-~~H~~~k~~~C~~   45 (46)
T 2emi_A            2 SSGSSGTG--ERHYECSECGKAFIQKSTLSMHQ-RIHRGEKPSGPSS   45 (46)
T ss_dssp             CCCCSCSS--CCCEECSSSCCEESSHHHHHHHH-GGGCSCCCCSCCC
T ss_pred             CCCcccCC--CCCCCCCCCCcccCCHHHHHHHH-hHhCCCCCCCCCC
Confidence            47889987  59999999999999999999998 7799999999974

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.66  E-value=8.7e-09  Score=69.04  Aligned_cols=44  Identities=27%  Similarity=0.403  Sum_probs=39.9

Q ss_pred             HHHhhccCCCCCcccccccccccCCHHHHHHhHHhhccCCCceeCCC
Q psy8169          35 RHLKIHDDKESKRFKCEQCDKRFSSNAELNKHSSAIHQRLKLHECDL   81 (843)
Q Consensus        35 ~H~~~h~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~C~~   81 (843)
                      +|+++|.+  ++||.|+.|++.|.+...|..|+ ..|.+++||.|++
T Consensus         2 ~h~~~H~~--~k~~~C~~C~k~F~~~~~L~~H~-~~H~~~k~~~C~~   45 (46)
T 2en9_A            2 SSGSSGAG--KKLFKCNECKKTFTQSSSLTVHQ-RIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCSSCCS--SCCCBCTTTCCBCSSHHHHHHHH-HHHTSSCCCSCCC
T ss_pred             CCCCCCCC--CCCEECCccCcccCCHHHHHHHH-HHcCCCCCCCCCC
Confidence            47888987  59999999999999999999998 6799999999974

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.66  E-value=8.3e-09  Score=69.15  Aligned_cols=44  Identities=30%  Similarity=0.496  Sum_probs=39.9

Q ss_pred             HHHhhccCCCCCcccccccccccCCHHHHHHhHHhhccCCCceeCCC
Q psy8169          35 RHLKIHDDKESKRFKCEQCDKRFSSNAELNKHSSAIHQRLKLHECDL   81 (843)
Q Consensus        35 ~H~~~h~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~C~~   81 (843)
                      +|+++|.+  ++||.|+.|++.|.+...|..|+ ..|.+++||.|+.
T Consensus         2 ~H~~~H~~--~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~k~~~C~~   45 (46)
T 2yth_A            2 SSGSSGSG--EKPFQCEECGKRFTQNSHLHSHQ-RVHTGEKPSGPSS   45 (46)
T ss_dssp             CCCSCCCC--SSSBCCSSSCCCBSSHHHHHHHG-GGGTTCCCSSCCC
T ss_pred             CcccCCCC--CcCCCCCCCCcccCCHHHHHHHH-HhcCCCCCCCCCC
Confidence            47888987  59999999999999999999997 7799999999974

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.66  E-value=8.9e-09  Score=69.00  Aligned_cols=44  Identities=20%  Similarity=0.369  Sum_probs=39.6

Q ss_pred             HHHhhccCCCCCcccccccccccCCHHHHHHhHHhhccCCCceeCCC
Q psy8169          35 RHLKIHDDKESKRFKCEQCDKRFSSNAELNKHSSAIHQRLKLHECDL   81 (843)
Q Consensus        35 ~H~~~h~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~C~~   81 (843)
                      .|+++|.+  ++||.|+.|++.|.....|..|+ .+|.+++||.|+.
T Consensus         2 ~H~~~H~~--~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~k~~~C~~   45 (46)
T 2eoh_A            2 SSGSSGSG--KKPYECKECRKTFIQIGHLNQHK-RVHTGERSSGPSS   45 (46)
T ss_dssp             CCCCSCCC--SCSCCCSSSCCCCSSHHHHHHHH-HHCSSCCSCSTTC
T ss_pred             CCCCCcCC--CCCcCCCCcCchhCCHHHHHHHH-HHhCCCCCCCCCC
Confidence            37888987  59999999999999999999998 6799999999973

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.66  E-value=7e-09  Score=69.50  Aligned_cols=43  Identities=21%  Similarity=0.371  Sum_probs=39.3

Q ss_pred             HHhhccCCCCCcccccccccccCCHHHHHHhHHhhccCCCceeCCC
Q psy8169          36 HLKIHDDKESKRFKCEQCDKRFSSNAELNKHSSAIHQRLKLHECDL   81 (843)
Q Consensus        36 H~~~h~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~C~~   81 (843)
                      |+++|.+  ++||.|+.|++.|.+...|..|+ ..|.+++||.|++
T Consensus         3 h~~~H~~--~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~k~~~C~~   45 (46)
T 2eon_A            3 SGSSGTG--EKPYKCQVCGKAFRVSSHLVQHH-SVHSGERPSGPSS   45 (46)
T ss_dssp             CSSSCSS--CCSCBCSSSCCBCSSHHHHHHHT-TTTTSCCSCTTSC
T ss_pred             CCCCCCC--CcccCCCCCCcccCcHHHHHHHH-HhcCCCCCCCCCC
Confidence            7788987  59999999999999999999998 7799999999974

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.65  E-value=7e-09  Score=69.59  Aligned_cols=44  Identities=25%  Similarity=0.414  Sum_probs=39.9

Q ss_pred             HHHhhccCCCCCcccccccccccCCHHHHHHhHHhhccCCCceeCCC
Q psy8169          35 RHLKIHDDKESKRFKCEQCDKRFSSNAELNKHSSAIHQRLKLHECDL   81 (843)
Q Consensus        35 ~H~~~h~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~C~~   81 (843)
                      .|+++|.+  ++||.|+.|++.|.+...|..|+ ..|.+++||.|++
T Consensus         2 ~H~~~H~~--~~~~~C~~C~k~f~~~~~L~~H~-~~H~~~kp~~C~~   45 (46)
T 2eor_A            2 SSGSSGTG--EKPYNCEECGKAFIHDSQLQEHQ-RIHTGEKPSGPSS   45 (46)
T ss_dssp             CSSSSSSC--CCSEECTTTCCEESSHHHHHHHH-HHHHSCCCSSSTT
T ss_pred             CCCcCcCC--CcCccCCCCCCCcCCHHHHHHHH-HhcCCCCCCCCCC
Confidence            48889987  59999999999999999999998 6799999999974

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.65  E-value=7.5e-09  Score=69.43  Aligned_cols=44  Identities=25%  Similarity=0.389  Sum_probs=40.1

Q ss_pred             HHHhhccCCCCCcccccccccccCCHHHHHHhHHhhccCCCceeCCC
Q psy8169          35 RHLKIHDDKESKRFKCEQCDKRFSSNAELNKHSSAIHQRLKLHECDL   81 (843)
Q Consensus        35 ~H~~~h~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~C~~   81 (843)
                      +|+++|.+  ++||.|+.|++.|.+...|..|+ ..|.+++||.|++
T Consensus         2 ~H~~~H~~--~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~~p~~C~~   45 (46)
T 2yts_A            2 SSGSSGTG--EKPYICNECGKSFIQKSHLNRHR-RIHTGEKPSGPSS   45 (46)
T ss_dssp             CCSCCCCS--CCSEECSSSCCEESSHHHHHHHG-GGTSSCCSSCCCC
T ss_pred             CCCCCCCC--CcCEECCCCChhhCChHHHHHHH-HhcCCCCCcCCCC
Confidence            47888987  59999999999999999999998 7899999999974

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.65  E-value=8.3e-09  Score=69.21  Aligned_cols=44  Identities=25%  Similarity=0.414  Sum_probs=40.0

Q ss_pred             HHHhhccCCCCCcccccccccccCCHHHHHHhHHhhccCCCceeCCC
Q psy8169          35 RHLKIHDDKESKRFKCEQCDKRFSSNAELNKHSSAIHQRLKLHECDL   81 (843)
Q Consensus        35 ~H~~~h~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~C~~   81 (843)
                      +|+++|.+  ++||.|+.|++.|.....|..|+ ..|.+++||.|+.
T Consensus         2 ~H~~~H~~--~~~~~C~~C~k~f~~~~~L~~H~-~~H~~~k~~~C~~   45 (46)
T 2yrj_A            2 SSGSSGTG--EKPYRCGECGKAFAQKANLTQHQ-RIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCC--CCCEECSSSCCEESSHHHHHHHH-TTTSSCCSSCSCC
T ss_pred             CCccCCCC--CCCeECCCCCCccCCHHHHHHHH-HHcCCCCCCCCCC
Confidence            47888987  59999999999999999999998 7799999999974

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.65  E-value=5.9e-09  Score=69.88  Aligned_cols=44  Identities=25%  Similarity=0.391  Sum_probs=39.9

Q ss_pred             HHHhhccCCCCCcccccccccccCCHHHHHHhHHhhccCCCceeCCC
Q psy8169          35 RHLKIHDDKESKRFKCEQCDKRFSSNAELNKHSSAIHQRLKLHECDL   81 (843)
Q Consensus        35 ~H~~~h~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~C~~   81 (843)
                      +|+++|.+  ++||.|+.|++.|.....|..|+ ..|.+++||.|+.
T Consensus         2 ~H~~~H~~--~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~~~~~C~~   45 (46)
T 2eoz_A            2 SSGSSGTG--EKPYSCNVCGKAFVLSAHLNQHL-RVHTQETLSGPSS   45 (46)
T ss_dssp             CSCCCCSS--CCSEEETTTTEEESSHHHHHHHH-HHHSSCCSSSCCC
T ss_pred             CccccCCC--CCCeECcccChhhCCHHHHHHHH-HHhCCCCCCCCCC
Confidence            48889987  59999999999999999999998 6799999999973

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.64  E-value=9.3e-09  Score=68.20  Aligned_cols=43  Identities=19%  Similarity=0.347  Sum_probs=39.1

Q ss_pred             HHHhhccCCCCCcccccccccccCCHHHHHHhHHhhccCCCceeCC
Q psy8169          35 RHLKIHDDKESKRFKCEQCDKRFSSNAELNKHSSAIHQRLKLHECD   80 (843)
Q Consensus        35 ~H~~~h~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~C~   80 (843)
                      +|+++|.+  ++||.|+.|++.|.+...|..|+ ..|.+++||.|+
T Consensus         2 ~H~~~H~~--~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~~~~~C~   44 (44)
T 2eof_A            2 SSGSSGTG--EKPYECNECQKAFNTKSNLMVHQ-RTHTGESGPSSG   44 (44)
T ss_dssp             CCSSCCSC--CCSEECTTTCCEESCHHHHHHHH-HHTTTSSCSCCC
T ss_pred             CCccCCCC--CCCeECCCCCcccCCHhHHHHHH-HHhCCCCCCCCC
Confidence            47889987  58999999999999999999998 679999999985

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.64  E-value=9.8e-09  Score=68.09  Aligned_cols=43  Identities=21%  Similarity=0.278  Sum_probs=39.2

Q ss_pred             HHHhhccCCCCCcccccccccccCCHHHHHHhHHhhccCCCceeCC
Q psy8169          35 RHLKIHDDKESKRFKCEQCDKRFSSNAELNKHSSAIHQRLKLHECD   80 (843)
Q Consensus        35 ~H~~~h~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~C~   80 (843)
                      +|+++|.+  ++||.|+.|++.|.+...|..|+ ..|.+++||.|+
T Consensus         2 ~H~~~H~~--~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~~~~~C~   44 (44)
T 2en7_A            2 SSGSSGTG--MKPYVCNECGKAFRSKSYLIIHT-RTHTGESGPSSG   44 (44)
T ss_dssp             CSCCCSSS--SSSSCCTTTCCCCSSHHHHHHHH-TTTCCSSSSCCC
T ss_pred             CCCcCCCC--CcCeECCCCCCccCCHHHHHHHh-hhcCCCCCCCCC
Confidence            47888987  59999999999999999999998 779999999985

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.63  E-value=5.9e-09  Score=69.88  Aligned_cols=43  Identities=21%  Similarity=0.357  Sum_probs=39.4

Q ss_pred             HHHhhccCCCCCcccccccccccCCHHHHHHhHHhhccCCCceeCC
Q psy8169          35 RHLKIHDDKESKRFKCEQCDKRFSSNAELNKHSSAIHQRLKLHECD   80 (843)
Q Consensus        35 ~H~~~h~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~C~   80 (843)
                      +|+++|.+  ++||.|+.|++.|.+...|..|+ ..|.+++||.|+
T Consensus         2 ~H~~~H~~--~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~k~~~C~   44 (46)
T 2yto_A            2 SSGSSGTG--EKPYKCSDCGKAFTRKSGLHIHQ-QSHTGERHSGPS   44 (46)
T ss_dssp             CCCCCCCS--CCCEECSSSCCEESSHHHHHHHH-HHHTCCCBTTTB
T ss_pred             CcccccCC--CCCEECcccCCccCCHhHHHHHH-HHcCCCCCCCCC
Confidence            58889987  59999999999999999999998 679999999986

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.63  E-value=9.1e-09  Score=68.96  Aligned_cols=43  Identities=26%  Similarity=0.385  Sum_probs=39.0

Q ss_pred             HhhccCCCCCcccccccccccCCHHHHHHhHHhhccCCCceeCCCC
Q psy8169          37 LKIHDDKESKRFKCEQCDKRFSSNAELNKHSSAIHQRLKLHECDLC   82 (843)
Q Consensus        37 ~~~h~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~C~~C   82 (843)
                      +++|.+  +++|.|++|++.|.+...|..|+ ..|.+++||.|++|
T Consensus         4 ~~~h~~--~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~k~~~C~~C   46 (46)
T 2ytt_A            4 GSSGEG--EKPYQCSECGKSFSGSYRLTQHW-ITHTREKPSGPSSG   46 (46)
T ss_dssp             SSSCSC--CCTTCCSSSCCCCSSHHHHHHHH-THHHHCCCCSCCCC
T ss_pred             CCCCCC--CCCeeCCCCCcccCCHHHHHHHH-HHcCCCCCCCCCCC
Confidence            456777  59999999999999999999998 77999999999988

>2epq_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.62  E-value=1.9e-08  Score=67.01  Aligned_cols=42  Identities=19%  Similarity=0.317  Sum_probs=38.3

Q ss_pred             hccCCCCCcccccccccccCCHHHHHHhHHhhccCCCceeCCCCC
Q psy8169          39 IHDDKESKRFKCEQCDKRFSSNAELNKHSSAIHQRLKLHECDLCG   83 (843)
Q Consensus        39 ~h~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~C~~C~   83 (843)
                      .|.+  ++||.|+.|++.|.....|..|+ ..|.++++|.|+.||
T Consensus         4 ~h~~--~k~~~C~~C~k~f~~~~~l~~H~-~~H~~~~~~~C~~cg   45 (45)
T 2epq_A            4 GSSG--EKPYSCPVCGLRFKRKDRMSYHV-RSHDGSVGKSGPSSG   45 (45)
T ss_dssp             CCSS--CCSSEETTTTEECSCHHHHHHHH-HHHSCCCCCCCCCCC
T ss_pred             CcCC--CCCCcCCCCCcccCCHHHHHHHH-HHccCCCCCCCcCCC
Confidence            4666  58999999999999999999998 679999999999996

>2eoy_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.62  E-value=9.3e-09  Score=68.91  Aligned_cols=44  Identities=32%  Similarity=0.505  Sum_probs=39.8

Q ss_pred             HHHhhccCCCCCcccccccccccCCHHHHHHhHHhhccC-CCceeCCC
Q psy8169          35 RHLKIHDDKESKRFKCEQCDKRFSSNAELNKHSSAIHQR-LKLHECDL   81 (843)
Q Consensus        35 ~H~~~h~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~-~~~~~C~~   81 (843)
                      .|+++|.+  ++||.|+.|++.|.+...|..|+ .+|.+ ++||.|++
T Consensus         2 ~H~~~H~~--~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~~~~~~C~~   46 (46)
T 2eoy_A            2 SSGSSGQK--EKCFKCNKCEKTFSCSKYLTQHE-RIHTRGVKSGPSSG   46 (46)
T ss_dssp             CCCCCCCC--SCCEECSSSCCEESSSHHHHHHH-TTCCSCCTTSSSCC
T ss_pred             CCccccCC--CCCEECcCCCCcCCCHHHHHHHH-HHcCCCCCCCCCCC
Confidence            37888987  59999999999999999999998 78999 99999974

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.61  E-value=1.3e-08  Score=68.30  Aligned_cols=44  Identities=30%  Similarity=0.421  Sum_probs=39.9

Q ss_pred             HHHhhccCCCCCcccccccccccCCHHHHHHhHHhhccCCCceeCCC
Q psy8169          35 RHLKIHDDKESKRFKCEQCDKRFSSNAELNKHSSAIHQRLKLHECDL   81 (843)
Q Consensus        35 ~H~~~h~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~C~~   81 (843)
                      +|+++|.+  ++||.|+.|++.|.....|..|+ ..|.+++||.|+.
T Consensus         2 ~H~~~H~~--~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~k~~~C~~   45 (46)
T 2eq3_A            2 SSGSSGTG--EKPYECNQCGKAFSVRSSLTTHQ-AIHTGKKPSGPSS   45 (46)
T ss_dssp             CCCCSSCC--CCSSEETTTTEECSSHHHHHHHH-TTSCCCCCCCSCC
T ss_pred             CcccCCCC--CCCeECCCCChhhCCHHHHHHHH-HHhCCCCCCCCCC
Confidence            47888987  59999999999999999999998 7899999999974

>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.61  E-value=2.1e-08  Score=67.83  Aligned_cols=39  Identities=28%  Similarity=0.388  Sum_probs=36.9

Q ss_pred             CCcccccccccccCCHHHHHHhHHhhccCCCceeCCCCCC
Q psy8169          45 SKRFKCEQCDKRFSSNAELNKHSSAIHQRLKLHECDLCGK   84 (843)
Q Consensus        45 ~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~C~~C~~   84 (843)
                      +++|.|++|++.|.+...|..|+ .+|.+++||.|++|++
T Consensus        10 ~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~k~~~C~~C~k   48 (48)
T 2epr_A           10 RKQVACEICGKIFRDVYHLNRHK-LSHSGEKPYSSGPSSG   48 (48)
T ss_dssp             CCSEEETTTTEEESSHHHHHHHG-GGSCSCCCCCSCCCCC
T ss_pred             CcCeeCCCCCcccCCHHHHHHHH-HhcCCCCCccCCCCCC
Confidence            68999999999999999999998 7899999999999985

>1yui_A GAGA-factor; complex (DNA-binding protein/DNA), chromatin remodeling, DNA binding protein/DNA complex; HET: DNA; NMR {Drosophila melanogaster} SCOP: g.37.1.1 PDB: 1yuj_A*

Probab=98.61  E-value=3.6e-09  Score=73.84  Aligned_cols=50  Identities=12%  Similarity=0.140  Sum_probs=36.6

Q ss_pred             hhcCCHHHHHHHHhhccCCCCCcccccccccccCCHHHHHHhHHhhccCCCce
Q psy8169          25 KVFESRENLMRHLKIHDDKESKRFKCEQCDKRFSSNAELNKHSSAIHQRLKLH   77 (843)
Q Consensus        25 ~~f~~~~~l~~H~~~h~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~   77 (843)
                      +.|.....|..|+++|.+  ++||.|+.|++.|.....|..|+ .+|.+++||
T Consensus         4 k~~~~~~~l~~h~~~H~~--~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~kp~   53 (54)
T 1yui_A            4 KRAKHPPGTEKPRSRSQS--EQPATCPICYAVIRQSRNLRRHL-ELRHFAKPG   53 (54)
T ss_dssp             CCCSCSSCCCCCHHHHTS--SCCEECTTTCCEESSHHHHHHHH-HHHTTTSCC
T ss_pred             cccCCCcchhhHHHhcCC--CCCccCCCCCcccCCHHHHHHHH-HHhccCCCC
Confidence            556667777777777776  47777777777777777777776 567777665

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.61  E-value=9.8e-09  Score=67.24  Aligned_cols=42  Identities=24%  Similarity=0.396  Sum_probs=38.2

Q ss_pred             HHHhhccCCCCCcccccccccccCCHHHHHHhHHhhccCCCceeC
Q psy8169          35 RHLKIHDDKESKRFKCEQCDKRFSSNAELNKHSSAIHQRLKLHEC   79 (843)
Q Consensus        35 ~H~~~h~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~C   79 (843)
                      +|+++|.+  ++||.|+.|++.|.+...|..|+ ..|.+++||.|
T Consensus         1 ~H~~~H~~--~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~~~~~C   42 (42)
T 2ytb_A            1 GSSGSSGG--EKPYRCDQCGKAFSQKGSLIVHI-RVHTGSGPSSG   42 (42)
T ss_dssp             CCCCCCCS--CCSBCCTTTTCCBSSHHHHHTTG-GGTSCCSCCCC
T ss_pred             CCccccCC--CCCeeCCCccchhCCHHHHHHHH-HHhCCCCCCCC
Confidence            37888987  59999999999999999999998 78999999987

>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.61  E-value=1e-08  Score=67.89  Aligned_cols=43  Identities=23%  Similarity=0.389  Sum_probs=39.1

Q ss_pred             HHHhhccCCCCCcccccccccccCCHHHHHHhHHhhccCCCceeCC
Q psy8169          35 RHLKIHDDKESKRFKCEQCDKRFSSNAELNKHSSAIHQRLKLHECD   80 (843)
Q Consensus        35 ~H~~~h~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~C~   80 (843)
                      +|+++|.+  ++||.|+.|++.|.....|..|+ ..|.+++||.|.
T Consensus         2 ~H~~~H~~--~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~~~~~C~   44 (44)
T 2yu5_A            2 SSGSSGAG--ENPFKCSKCDRVFTQRNYLVQHE-RTHARKSGPSSG   44 (44)
T ss_dssp             CCSCCCSC--CCSEECSSSSCEESSSHHHHHHH-HHCCCCCSSCCC
T ss_pred             CCccccCC--CCCeECCCCCchhCCHHHHHHHh-HhcCCCCCCCCC
Confidence            48889987  59999999999999999999998 679999999985

>2emb_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.61  E-value=1.1e-08  Score=67.81  Aligned_cols=43  Identities=19%  Similarity=0.339  Sum_probs=39.2

Q ss_pred             HHHhhccCCCCCcccccccccccCCHHHHHHhHHhhccCCCceeCC
Q psy8169          35 RHLKIHDDKESKRFKCEQCDKRFSSNAELNKHSSAIHQRLKLHECD   80 (843)
Q Consensus        35 ~H~~~h~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~C~   80 (843)
                      +|+++|.+  ++||.|+.|++.|.+...|..|+ .+|.+++||.|+
T Consensus         2 ~H~~~H~~--~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~~~~~C~   44 (44)
T 2emb_A            2 SSGSSGHT--RKRYECSKCQATFNLRKHLIQHQ-KTHAAKSGPSSG   44 (44)
T ss_dssp             CCCSCCCC--CSSEECTTTCCEESCHHHHHHHG-GGGCCCCCTTCC
T ss_pred             CcccccCC--CCCeECCCCCCccCCHHHHHHHH-HHcCCCCCcCCC
Confidence            48889987  58999999999999999999998 789999999985

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.60  E-value=1e-08  Score=68.73  Aligned_cols=44  Identities=25%  Similarity=0.410  Sum_probs=39.8

Q ss_pred             HHHhhccCCCCCcccccccccccCCHHHHHHhHHhhccCCCceeCCC
Q psy8169          35 RHLKIHDDKESKRFKCEQCDKRFSSNAELNKHSSAIHQRLKLHECDL   81 (843)
Q Consensus        35 ~H~~~h~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~C~~   81 (843)
                      +|+++|.+  ++||.|+.|++.|.+...|..|+ ..|.++++|.|+.
T Consensus         2 ~h~~~H~~--~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~k~~~C~~   45 (46)
T 2emz_A            2 SSGSSGSG--ERPFKCNECGKGFGRRSHLAGHL-RLHSREKSSGPSS   45 (46)
T ss_dssp             CCCSCSSC--CCSCCCSSSCCCCSSHHHHHHHH-HHHHHTTCCCSCC
T ss_pred             CCCcCCCC--CCCeECCCCCcccCCHHHHHHHH-HHhCCCCCCCCCC
Confidence            47889987  59999999999999999999998 6799999999973

>1yui_A GAGA-factor; complex (DNA-binding protein/DNA), chromatin remodeling, DNA binding protein/DNA complex; HET: DNA; NMR {Drosophila melanogaster} SCOP: g.37.1.1 PDB: 1yuj_A*

Probab=98.59  E-value=1.1e-08  Score=71.24  Aligned_cols=50  Identities=22%  Similarity=0.369  Sum_probs=45.2

Q ss_pred             cccccchhhhhhhhhccccCCCCCCccchhhcccccccccccccccccchhhhhhhHHHHhhhhhhhcCCCCC
Q psy8169         669 DKTFTRKDSLKKHIRIFHTQNQPQHTNVIEVALGARANAAFIDRIRCELCDKSFTRKDSLKKHNRIFHGGADP  741 (843)
Q Consensus       669 ~~~f~~~~~L~~H~~~~H~~~~p~~~~~~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~  741 (843)
                      ++.|.....|..|++. |.+++|                     |.|++|++.|.....|..|++.|++ ++|
T Consensus         3 ~k~~~~~~~l~~h~~~-H~~~k~---------------------~~C~~C~k~f~~~~~L~~H~~~H~~-~kp   52 (54)
T 1yui_A            3 AKRAKHPPGTEKPRSR-SQSEQP---------------------ATCPICYAVIRQSRNLRRHLELRHF-AKP   52 (54)
T ss_dssp             CCCCSCSSCCCCCHHH-HTSSCC---------------------EECTTTCCEESSHHHHHHHHHHHTT-TSC
T ss_pred             ccccCCCcchhhHHHh-cCCCCC---------------------ccCCCCCcccCCHHHHHHHHHHhcc-CCC
Confidence            4678899999999998 999999                     9999999999999999999998666 665

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.59  E-value=1.3e-08  Score=68.17  Aligned_cols=43  Identities=26%  Similarity=0.410  Sum_probs=38.9

Q ss_pred             HHhhccCCCCCcccccccccccCCHHHHHHhHHhhccCCCceeCCC
Q psy8169          36 HLKIHDDKESKRFKCEQCDKRFSSNAELNKHSSAIHQRLKLHECDL   81 (843)
Q Consensus        36 H~~~h~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~C~~   81 (843)
                      |+++|.+  ++||.|++|++.|.+...|..|+ .+|.+++||.|+.
T Consensus         3 h~~~h~~--~k~~~C~~C~k~F~~~~~L~~H~-~~H~~~k~~~C~~   45 (46)
T 2enh_A            3 SGSSGTG--EKPYECDVCRKAFSHHASLTQHQ-RVHSGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCC--SSSCBCTTTCCBCSSSHHHHHHG-GGSCCSCCCCCCC
T ss_pred             CCCCcCC--CCCcCCCCcCchhCCHHHHHHHH-HHhCCCCCCCCCC
Confidence            6788887  59999999999999999999998 7799999999973

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.59  E-value=1.1e-08  Score=66.89  Aligned_cols=41  Identities=24%  Similarity=0.362  Sum_probs=37.3

Q ss_pred             HHhhccCCCCCcccccccccccCCHHHHHHhHHhhccCCCceeC
Q psy8169          36 HLKIHDDKESKRFKCEQCDKRFSSNAELNKHSSAIHQRLKLHEC   79 (843)
Q Consensus        36 H~~~h~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~C   79 (843)
                      |+++|.+  ++||.|+.|++.|.+...|..|+ ..|.+++||.|
T Consensus         2 H~~~H~~--~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~~~~~C   42 (42)
T 2eos_A            2 SSGSSGG--EKPYPCEICGTRFRHLQTLKSHL-RIHTGSGPSSG   42 (42)
T ss_dssp             CCSCCSS--SCCBCCSSSCCCBSSHHHHHHHT-TTTSCCSSTTC
T ss_pred             CCcccCC--CCCEECCCCCCccCCHHHHHHHH-HhcCCCCCCCC
Confidence            6778887  58999999999999999999998 78999999987

>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A

Probab=98.58  E-value=1.5e-08  Score=66.28  Aligned_cols=41  Identities=17%  Similarity=0.275  Sum_probs=37.4

Q ss_pred             HHhhccCCCCCcccccccccccCCHHHHHHhHHhhccCCCceeC
Q psy8169          36 HLKIHDDKESKRFKCEQCDKRFSSNAELNKHSSAIHQRLKLHEC   79 (843)
Q Consensus        36 H~~~h~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~C   79 (843)
                      |+++|.+  ++||.|+.|++.|.+...|..|+ ..|.+++||.|
T Consensus         2 H~~~H~~--~~~~~C~~C~k~f~~~~~l~~H~-~~H~~~k~~~C   42 (42)
T 2epc_A            2 SSGSSGG--ETPYLCGQCGKSFTQRGSLAVHQ-RSCSQSGPSSG   42 (42)
T ss_dssp             CCSCCCS--SCCEECSSSCCEESSHHHHHHHH-HHTTCCCCCCC
T ss_pred             CCccCCC--CCCeECCCCCcccCCHHHHHHHh-hhcCCCCCCCC
Confidence            6778887  58999999999999999999998 77999999987

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.57  E-value=1.1e-08  Score=67.04  Aligned_cols=41  Identities=29%  Similarity=0.429  Sum_probs=37.5

Q ss_pred             HHhhccCCCCCcccccccccccCCHHHHHHhHHhhccCCCceeC
Q psy8169          36 HLKIHDDKESKRFKCEQCDKRFSSNAELNKHSSAIHQRLKLHEC   79 (843)
Q Consensus        36 H~~~h~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~C   79 (843)
                      |+++|.+  ++||.|+.|++.|.+...|..|+ ..|.+++||.|
T Consensus         2 H~~~H~~--~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~~~~~C   42 (42)
T 2en2_A            2 SSGSSGG--EKPYKCETCGARFVQVAHLRAHV-LIHTGSGPSSG   42 (42)
T ss_dssp             CCCCCCS--SCSEECTTTCCEESSHHHHHHHT-HHHHSCCSSCC
T ss_pred             CCcccCC--CCCEeCCCcChhhCCHHHHHHHH-HHcCCCCCCCC
Confidence            6788887  58999999999999999999998 67999999987

>2eou_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.56  E-value=2.1e-08  Score=66.35  Aligned_cols=42  Identities=19%  Similarity=0.271  Sum_probs=38.2

Q ss_pred             HHhhccCCCCCcccccccccccCCHHHHHHhHHhhccCCCceeCC
Q psy8169          36 HLKIHDDKESKRFKCEQCDKRFSSNAELNKHSSAIHQRLKLHECD   80 (843)
Q Consensus        36 H~~~h~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~C~   80 (843)
                      |+++|.+  +++|.|+.|++.|.+...|..|+ ..|.+++||.|+
T Consensus         3 h~~~h~~--~~~~~C~~C~k~f~~~~~L~~H~-~~H~~~k~~~C~   44 (44)
T 2eou_A            3 SGSSGAA--KTTSECQECGKIFRHSSLLIEHQ-ALHAGESGPSSG   44 (44)
T ss_dssp             CSCSCSS--SCCCCCTTTCCCCSSHHHHHHHH-HHHTTSCCCCCC
T ss_pred             CCCCCCC--CcCeECCCCCcccCCHHHHHHHH-HHHCCCCCCCCC
Confidence            6778887  58999999999999999999998 679999999985

>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.55  E-value=1.4e-08  Score=67.24  Aligned_cols=43  Identities=28%  Similarity=0.469  Sum_probs=39.0

Q ss_pred             HHHhhccCCCCCcccccccccccCCHHHHHHhHHhhccCCCceeCC
Q psy8169          35 RHLKIHDDKESKRFKCEQCDKRFSSNAELNKHSSAIHQRLKLHECD   80 (843)
Q Consensus        35 ~H~~~h~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~C~   80 (843)
                      .|+++|.+  ++||.|+.|++.|.+...|..|+ .+|.+++||.|.
T Consensus         2 ~H~~~H~~--~~~~~C~~C~k~F~~~~~L~~H~-~~H~~~~~~~C~   44 (44)
T 2eox_A            2 SSGSSGTD--SKSYNCNECGKAFTRIFHLTRHQ-KIHTRKSGPSSG   44 (44)
T ss_dssp             CCCCCCCC--CCCEEETTTTEEESSSHHHHTTH-HHHCCCCCCSCC
T ss_pred             CCCcCCCC--CCCeECcccCcccCCHHHHHHHH-HHhCCCCCCCCC
Confidence            47888987  59999999999999999999998 679999999984

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.54  E-value=1.2e-08  Score=68.46  Aligned_cols=43  Identities=26%  Similarity=0.365  Sum_probs=39.3

Q ss_pred             HHHhhccCCCCCcccccccccccCCHHHHHHhHHhhccCCCceeCC
Q psy8169          35 RHLKIHDDKESKRFKCEQCDKRFSSNAELNKHSSAIHQRLKLHECD   80 (843)
Q Consensus        35 ~H~~~h~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~C~   80 (843)
                      +|+++|.+  ++||.|+.|++.|.+...|..|+ ..|.+++||.|+
T Consensus         2 ~H~~~H~~--~k~~~C~~C~k~F~~~~~L~~H~-~~H~~~~~~~C~   44 (46)
T 2en3_A            2 SSGSSGTG--EKPFQCKECGMNFSWSCSLFKHL-RSHERTDPSGPS   44 (46)
T ss_dssp             CCCCCSCC--CCSEECSSSCCEESSSHHHHHHH-HHHHHSCCSSCS
T ss_pred             ccccccCC--CCCeeCcccChhhCCHHHHHHHH-HHhCCCCCCCCC
Confidence            48889987  59999999999999999999998 679999999986

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.53  E-value=3.2e-08  Score=65.43  Aligned_cols=43  Identities=19%  Similarity=0.288  Sum_probs=38.7

Q ss_pred             HHHhhccCCCCCcccccccccccCCHHHHHHhHHhhccCCCceeCC
Q psy8169          35 RHLKIHDDKESKRFKCEQCDKRFSSNAELNKHSSAIHQRLKLHECD   80 (843)
Q Consensus        35 ~H~~~h~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~C~   80 (843)
                      .|+++|.+  ++||.|++|++.|.+...|..|+ .+|.+++||.|.
T Consensus         2 ~H~~~H~~--~k~~~C~~C~k~F~~~~~L~~H~-~~H~~~k~~~~g   44 (44)
T 2epv_A            2 SSGSSGSG--EKPYECNECGKAFIWKSLLIVHE-RTHAGVSGPSSG   44 (44)
T ss_dssp             CCCCCCCC--CCSEECSSSCCEESSHHHHHHHH-GGGSSCSCCCCC
T ss_pred             CCCcccCC--CcCeECCCCCcccCchHHHHHHH-hHhcCCCCCCCC
Confidence            47889988  59999999999999999999998 779999999873

>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A

Probab=98.50  E-value=4.4e-08  Score=61.92  Aligned_cols=35  Identities=20%  Similarity=0.317  Sum_probs=28.8

Q ss_pred             HHhhcCCCCccccccchhhcCCHHHHHHHHhhccC
Q psy8169           8 HIKSHEYVENHMCELCYKVFESRENLMRHLKIHDD   42 (843)
Q Consensus         8 h~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~   42 (843)
                      |+++|+++++|.|+.|++.|.+...|..|+++|.+
T Consensus         2 H~~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~   36 (37)
T 1p7a_A            2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRHML   36 (37)
T ss_dssp             CSSTTCCSSSBCCTTTCCCBSSHHHHHHHHGGGTC
T ss_pred             CCCcCCCCCCccCCCCCcccCcHHHHHHHHHHhcc
Confidence            66788888888888888888888888888888865

>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.49  E-value=4.5e-08  Score=66.30  Aligned_cols=44  Identities=27%  Similarity=0.373  Sum_probs=39.6

Q ss_pred             HHhhccCCCCCccccc--ccccccCCHHHHHHhHHhhccCCCceeCCCC
Q psy8169          36 HLKIHDDKESKRFKCE--QCDKRFSSNAELNKHSSAIHQRLKLHECDLC   82 (843)
Q Consensus        36 H~~~h~~~~~~~~~C~--~C~~~f~~~~~l~~H~~~~h~~~~~~~C~~C   82 (843)
                      |.++|.+  ++||.|.  .|++.|.....|..|+ ..|.+++||+|+.|
T Consensus         3 ~~~~H~~--~k~~~C~~~~C~k~f~~~~~L~~H~-~~H~~~k~~~C~~C   48 (48)
T 2ent_A            3 SGSSGTG--EKPFACTWPGCGWRFSRSDELSRHR-RSHSGVKPSGPSSG   48 (48)
T ss_dssp             CCCSSCC--CCCEECCSSSCCCEESSHHHHHHHH-TTSCCCCSCSSCCC
T ss_pred             CCCCcCC--CCCeECCCCCCCCccCCHHHHHHHH-HHhCCCCCCCCCCC
Confidence            4567877  5899998  8999999999999998 77999999999988

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.48  E-value=4.7e-08  Score=65.34  Aligned_cols=42  Identities=19%  Similarity=0.286  Sum_probs=37.5

Q ss_pred             HhhccCCCCCcccccccccccCCHHHHHHhHHhhccCCCceeCCC
Q psy8169          37 LKIHDDKESKRFKCEQCDKRFSSNAELNKHSSAIHQRLKLHECDL   81 (843)
Q Consensus        37 ~~~h~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~C~~   81 (843)
                      +++|.+  +++|.|+.|++.|.+...|..|+ ..|.+++||.|++
T Consensus         4 ~~~h~~--~k~~~C~~C~k~F~~~~~L~~H~-~~H~~~k~~~C~~   45 (46)
T 2eom_A            4 GSSGHG--ERGHRCSDCGKFFLQASNFIQHR-RIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCC--CSSCCCSSSCCCCSSHHHHHHHH-HHHSSCCCSSCCC
T ss_pred             CCCCCC--CCCcCCCCCCCeeCChHHHHHHH-HHhCCCCCCCCCC
Confidence            567777  58999999999999999999998 6799999999974

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.48  E-value=4.3e-08  Score=65.18  Aligned_cols=42  Identities=26%  Similarity=0.396  Sum_probs=37.4

Q ss_pred             HhhccCCCCCcccccccccccCCHHHHHHhHHhhccCCCceeCCC
Q psy8169          37 LKIHDDKESKRFKCEQCDKRFSSNAELNKHSSAIHQRLKLHECDL   81 (843)
Q Consensus        37 ~~~h~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~C~~   81 (843)
                      .++|.+  +++|.|++|++.|.+...|..|+ .+|.+++||.|++
T Consensus         4 ~~~h~~--~k~~~C~~C~k~F~~~~~L~~H~-~~H~~~k~~~C~~   45 (45)
T 2epu_A            4 GSSGTG--QKPFECTHCGKSFRAKGNLVTHQ-RIHTGEKSGPSSG   45 (45)
T ss_dssp             CCCCCS--CCSEEETTTTEEESSHHHHHHHH-TTTSSCCCCCSCC
T ss_pred             CCCCCC--CcCccCCCCCCccCChHHHHHHH-HHhCCCCCCCCCC
Confidence            456776  58999999999999999999998 7899999999974

>2d9k_A FLN29 gene product; zinc finger, ZF-TRAF, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.48  E-value=7.4e-09  Score=77.51  Aligned_cols=64  Identities=19%  Similarity=0.254  Sum_probs=48.8

Q ss_pred             HHHHHhhcCCCCccccccchhhcCCHHHHHHHHhhccCCCCCcccccccccccCCHHHHHHhHHhhccCC
Q psy8169           5 ISEHIKSHEYVENHMCELCYKVFESRENLMRHLKIHDDKESKRFKCEQCDKRFSSNAELNKHSSAIHQRL   74 (843)
Q Consensus         5 l~~h~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~   74 (843)
                      |..|+++|.+.+++.|+.|++.| ....|..|+ .|.+  ++||.|+.|++.|. ...|..|+ .+|.+.
T Consensus         5 L~~H~~~~c~~r~~~C~~C~~~~-~~~~L~~H~-~~c~--~~~~~C~~C~~~~~-~~~l~~H~-~~c~~~   68 (75)
T 2d9k_A            5 SSGHEETECPLRLAVCQHCDLEL-SILKLKEHE-DYCG--ARTELCGNCGRNVL-VKDLKTHP-EVCGRE   68 (75)
T ss_dssp             CSCCCCCCCCCCCEECSSSCCEE-CHHHHHHHH-HHHH--HCEEECSSSCCEEE-TTGGGTHH-HHBTTB
T ss_pred             HHhhCcccCCCcccCCcccChHh-hHHHHHHHH-hHcC--CCceEcccCCCcCc-HHHHHHHH-HHccCC
Confidence            55677778888888888888888 488888888 6766  47888888888776 47888887 556554

>2yrm_A B-cell lymphoma 6 protein; ZF-C2H2, zinc binding, DNA binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=98.46  E-value=8.7e-08  Score=62.87  Aligned_cols=41  Identities=27%  Similarity=0.391  Sum_probs=36.4

Q ss_pred             hhccCCCCCcccccccccccCCHHHHHHhHHhhccCCCceeCCC
Q psy8169          38 KIHDDKESKRFKCEQCDKRFSSNAELNKHSSAIHQRLKLHECDL   81 (843)
Q Consensus        38 ~~h~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~C~~   81 (843)
                      ++|.+  ++||.|+.|++.|.+...|..|+ ..|.+++||.|++
T Consensus         3 ~~h~~--~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~k~~~C~~   43 (43)
T 2yrm_A            3 SGSSG--NGAFFCNECDCRFSEEASLKRHT-LQTHSDKSGPSSG   43 (43)
T ss_dssp             SCCSS--SCCBCCSSSCCCBSSHHHHHHHH-HHHTCTTCSSSCC
T ss_pred             cCcCC--CCCEECCCCCCeeCChHHHHHHH-HhhCCCCCccCCC
Confidence            35666  58999999999999999999998 6799999999974

>2d9k_A FLN29 gene product; zinc finger, ZF-TRAF, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.44  E-value=1.5e-08  Score=75.75  Aligned_cols=67  Identities=24%  Similarity=0.373  Sum_probs=57.6

Q ss_pred             hhhhhhhhhccccCCCCCCccchhhcccccccccccccccccchhhhhhhHHHHhhhhhhhcCCCCCCcchhhhhcCCcc
Q psy8169         675 KDSLKKHIRIFHTQNQPQHTNVIEVALGARANAAFIDRIRCELCDKSFTRKDSLKKHNRIFHGGADPKVMDEQMARGSAD  754 (843)
Q Consensus       675 ~~~L~~H~~~~H~~~~p~~~~~~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~~~~~~~~~~~~  754 (843)
                      +..|..|++. |.+.+|                     |.|++|++.|. ...|..|+ .+-+ ++|             
T Consensus         2 ~~~L~~H~~~-~c~~r~---------------------~~C~~C~~~~~-~~~L~~H~-~~c~-~~~-------------   43 (75)
T 2d9k_A            2 SSGSSGHEET-ECPLRL---------------------AVCQHCDLELS-ILKLKEHE-DYCG-ART-------------   43 (75)
T ss_dssp             CCCCSCCCCC-CCCCCC---------------------EECSSSCCEEC-HHHHHHHH-HHHH-HCE-------------
T ss_pred             chHHHhhCcc-cCCCcc---------------------cCCcccChHhh-HHHHHHHH-hHcC-CCc-------------
Confidence            4678999988 999999                     99999999995 89999998 6444 776             


Q ss_pred             eeeeeecCCCCCCCCccccchhhchhhhhhhhhhhHHHHHhHhhcc
Q psy8169         755 FLEVVLNEDGEGEPVSITNEILCKICNRTFTRNYNLKKHMKTVHKI  800 (843)
Q Consensus       755 ~~~~~~~~~~~~~~~~~~~~~~C~~C~~~F~~~~~L~~H~~~~H~~  800 (843)
                                          |.|+.|++.|. ...|..|++++.+.
T Consensus        44 --------------------~~C~~C~~~~~-~~~l~~H~~~c~~~   68 (75)
T 2d9k_A           44 --------------------ELCGNCGRNVL-VKDLKTHPEVCGRE   68 (75)
T ss_dssp             --------------------EECSSSCCEEE-TTGGGTHHHHBTTB
T ss_pred             --------------------eEcccCCCcCc-HHHHHHHHHHccCC
Confidence                                99999999988 59999999886664

>1njq_A Superman protein; zinc-finger, peptide-zinc complex, beta-BETA-ALFA motif, metal binding protein; NMR {Synthetic} SCOP: g.37.1.3 PDB: 2l1o_A

Probab=98.39  E-value=1.6e-07  Score=60.06  Aligned_cols=37  Identities=19%  Similarity=0.321  Sum_probs=24.3

Q ss_pred             cCCCCccccccchhhcCCHHHHHHHHhhccCCCCCcccc
Q psy8169          12 HEYVENHMCELCYKVFESRENLMRHLKIHDDKESKRFKC   50 (843)
Q Consensus        12 h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~C   50 (843)
                      |+++++|.|++|++.|.+...|..|+++|.+  ++||.+
T Consensus         1 h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~--~k~~~~   37 (39)
T 1njq_A            1 XWPPRSYTCSFCKREFRSAQALGGHMNVHRR--DRARLR   37 (39)
T ss_dssp             -CCSSSEECTTTCCEESSHHHHHHHHHTTCC--SCTTTT
T ss_pred             CCCCCceECCCCCcccCCHHHHHHHHHHcCC--Ccccee
Confidence            4566677777777777777777777777766  356644

>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.36  E-value=1.6e-07  Score=60.88  Aligned_cols=39  Identities=21%  Similarity=0.434  Sum_probs=34.7

Q ss_pred             hhccCCCCCcccccccccccCCHHHHHHhHHhhccCCCceeC
Q psy8169          38 KIHDDKESKRFKCEQCDKRFSSNAELNKHSSAIHQRLKLHEC   79 (843)
Q Consensus        38 ~~h~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~C   79 (843)
                      ++|.+  ++||.|+.|++.|.....|..|+ ..|.+++||.|
T Consensus         3 ~~h~~--~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~k~~~C   41 (41)
T 2ept_A            3 SGSSG--QRVYECQECGKSFRQKGSLTLHE-RIHTGSGPSSG   41 (41)
T ss_dssp             SSCCC--CCCEECSSSCCEESSHHHHHHHG-GGCCCCSCSCC
T ss_pred             CccCC--CCCeECCCCCCCcCCHHHHHHHH-HHhCCCCCcCC
Confidence            35666  58999999999999999999997 78999999987

>2elo_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.35  E-value=1.7e-07  Score=59.15  Aligned_cols=33  Identities=21%  Similarity=0.359  Sum_probs=27.2

Q ss_pred             hhcCCCCccccccchhhcCCHHHHHHHHhhccC
Q psy8169          10 KSHEYVENHMCELCYKVFESRENLMRHLKIHDD   42 (843)
Q Consensus        10 ~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~   42 (843)
                      ++|+++++|.|++|++.|.+...|..|+++|++
T Consensus         2 ~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~h~~   34 (37)
T 2elo_A            2 SSGSSGRSYSCPVCEKSFSEDRLIKSHIKTNHP   34 (37)
T ss_dssp             CCCCCCCCCEETTTTEECSSHHHHHHHHHHHCS
T ss_pred             CCCCCCCCcCCCCCCCccCCHHHHHHHHHHHcC
Confidence            567888888888888888888888888888876

>1x3c_A Zinc finger protein 292; DNA binding, nuclear protein, C2H2-type zinc finger, KIAA0530, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.32  E-value=3.4e-07  Score=63.93  Aligned_cols=37  Identities=19%  Similarity=0.296  Sum_probs=26.2

Q ss_pred             CCcccccc--cccccCCHHHHHHhHHhhccCCCceeCCC
Q psy8169          45 SKRFKCEQ--CDKRFSSNAELNKHSSAIHQRLKLHECDL   81 (843)
Q Consensus        45 ~~~~~C~~--C~~~f~~~~~l~~H~~~~h~~~~~~~C~~   81 (843)
                      +|||+|.+  |++.|.....|..|++++|++++||.|..
T Consensus        25 EKPYkC~~~~CgKaFsr~s~L~~H~rriHTgEKP~~~~~   63 (73)
T 1x3c_A           25 YRPYRCVHQGCFAAFTIQQNLILHYQAVHKSDLPAFSAE   63 (73)
T ss_dssp             SCSCBCCSTTCCCBCSSHHHHHHHHHHHSSSCCCCCCCS
T ss_pred             CCCeECCCCCcChhHcCHHHHHHHhhhhCCCCCCccccc
Confidence            47777754  77777777777777655677777777654

>2eln_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.31  E-value=3.3e-07  Score=57.15  Aligned_cols=32  Identities=25%  Similarity=0.263  Sum_probs=24.9

Q ss_pred             hcCCCCcccccc--chhhcCCHHHHHHHHhhccC
Q psy8169          11 SHEYVENHMCEL--CYKVFESRENLMRHLKIHDD   42 (843)
Q Consensus        11 ~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~   42 (843)
                      ++++++||+|+.  |+++|..++.|.+|+++|++
T Consensus         3 ~~~gekp~~C~~~~C~k~F~~~~~L~~H~r~Htg   36 (38)
T 2eln_A            3 SGSSGILLKCPTDGCDYSTPDKYKLQAHLKVHTA   36 (38)
T ss_dssp             CSSCCCCEECSSSSCCCEESCHHHHHHHHHHHSC
T ss_pred             CCCCCCCCCCCCCCCCCccCCHHHHHHHHHhcCC
Confidence            466778888875  88888888888888888876

>1x6f_A Zinc finger protein 462; zinc finger domain, KIAA1803, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.31  E-value=2e-08  Score=77.57  Aligned_cols=45  Identities=18%  Similarity=0.307  Sum_probs=33.5

Q ss_pred             HHhhcCCCCccccccchhhcCCHHHHHHHHhhccCCCCCcccccccc
Q psy8169           8 HIKSHEYVENHMCELCYKVFESRENLMRHLKIHDDKESKRFKCEQCD   54 (843)
Q Consensus         8 h~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~C~~C~   54 (843)
                      |.++|+++++|.|++|++.|.....|..|+++|.+  ++||+|..|.
T Consensus        16 ~~~~H~~~kpy~C~~C~k~F~~~~~L~~H~~~Ht~--ekp~~C~~~~   60 (88)
T 1x6f_A           16 GNGPRLQNSTYQCKHCDSKLQSTAELTSHLNIHNE--EFQKRAKRQE   60 (88)
T ss_dssp             CCCSCCCCSCEECSSSCCEESSHHHHHHHHHHHHH--HHHHHCCCCS
T ss_pred             cccccCCCCCCcCCCCCCEeCCHHHHHHHHHHhCC--CCCcccchhh
Confidence            34567777888888888888888888888887776  4778776654

>1x3c_A Zinc finger protein 292; DNA binding, nuclear protein, C2H2-type zinc finger, KIAA0530, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.27  E-value=5.8e-07  Score=62.81  Aligned_cols=39  Identities=18%  Similarity=0.336  Sum_probs=34.9

Q ss_pred             cCCCCcccccc--chhhcCCHHHHHHHH-hhccCCCCCcccccc
Q psy8169          12 HEYVENHMCEL--CYKVFESRENLMRHL-KIHDDKESKRFKCEQ   52 (843)
Q Consensus        12 h~~~~~~~C~~--C~~~f~~~~~l~~H~-~~h~~~~~~~~~C~~   52 (843)
                      .+|++||+|+.  |++.|.....|.+|+ ++|++  ++||.|..
T Consensus        22 ~sGEKPYkC~~~~CgKaFsr~s~L~~H~rriHTg--EKP~~~~~   63 (73)
T 1x3c_A           22 YSPYRPYRCVHQGCFAAFTIQQNLILHYQAVHKS--DLPAFSAE   63 (73)
T ss_dssp             SCSSCSCBCCSTTCCCBCSSHHHHHHHHHHHSSS--CCCCCCCS
T ss_pred             ccCCCCeECCCCCcChhHcCHHHHHHHhhhhCCC--CCCccccc
Confidence            57899999976  999999999999998 68998  59999864

>1srk_A Zinc finger protein ZFPM1; classical zinc finger, transcription; NMR {Mus musculus} SCOP: g.37.1.1

Probab=98.25  E-value=5.4e-07  Score=55.86  Aligned_cols=32  Identities=31%  Similarity=0.693  Sum_probs=24.3

Q ss_pred             hcCCCCccccccchhhcCCHHHHHHHHhhccC
Q psy8169          11 SHEYVENHMCELCYKVFESRENLMRHLKIHDD   42 (843)
Q Consensus        11 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~   42 (843)
                      +|+++++|.|++|++.|.+...|..|+++|++
T Consensus         1 ~H~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~   32 (35)
T 1srk_A            1 GSSGKRPFVCRICLSAFTTKANCARHLKVHTD   32 (35)
T ss_dssp             CCSCCSCEECSSSCCEESSHHHHHHHHGGGTS
T ss_pred             CCCCCcCeeCCCCCcccCCHHHHHHHHHHcCC
Confidence            36677777777777777777777777777765

>2elx_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}

Probab=98.25  E-value=5.3e-07  Score=55.89  Aligned_cols=32  Identities=25%  Similarity=0.397  Sum_probs=24.5

Q ss_pred             hcCCCCccccccchhhcCCHHHHHHHHhhccC
Q psy8169          11 SHEYVENHMCELCYKVFESRENLMRHLKIHDD   42 (843)
Q Consensus        11 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~   42 (843)
                      +|+++++|.|++|++.|.+...|..|+++|++
T Consensus         1 ~h~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~   32 (35)
T 2elx_A            1 GSSGSSGYVCALCLKKFVSSIRLRSHIREVHG   32 (35)
T ss_dssp             CCCCCCSEECSSSCCEESSHHHHHHHHHHTSC
T ss_pred             CCCCCCCeECCCCcchhCCHHHHHHHHHHHcC
Confidence            36677778888888888888888888777776

>1fv5_A First zinc finger of U-shaped; CCHC, protein interaction, transcription; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1y0j_B 2l6z_B

Probab=98.20  E-value=6.4e-07  Score=54.79  Aligned_cols=25  Identities=28%  Similarity=0.331  Sum_probs=14.0

Q ss_pred             CCCCccccccchhhcCCHHHHHHHH
Q psy8169          13 EYVENHMCELCYKVFESRENLMRHL   37 (843)
Q Consensus        13 ~~~~~~~C~~C~~~f~~~~~l~~H~   37 (843)
                      .+++||.|+.|+++|.+++.|.+|+
T Consensus         4 ~gekp~~C~~CgK~F~~~s~L~~H~   28 (36)
T 1fv5_A            4 LKPARFMCLPCGIAFSSPSTLEAHQ   28 (36)
T ss_dssp             SSCCCCEETTTTEECSCHHHHHHHH
T ss_pred             CCccCeECCCCCCccCCHhHccCcC
Confidence            4555555555555555555555554

>2elm_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.20  E-value=4.6e-07  Score=56.96  Aligned_cols=33  Identities=21%  Similarity=0.296  Sum_probs=25.2

Q ss_pred             hhcCCCCccccccchhhcCCHHHHHHH-HhhccC
Q psy8169          10 KSHEYVENHMCELCYKVFESRENLMRH-LKIHDD   42 (843)
Q Consensus        10 ~~h~~~~~~~C~~C~~~f~~~~~l~~H-~~~h~~   42 (843)
                      ++|+++++|.|+.|++.|.+...|..| +++|++
T Consensus         2 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~~H~~   35 (37)
T 2elm_A            2 SSGSSGHLYYCSQCHYSSITKNCLKRHVIQKHSN   35 (37)
T ss_dssp             CSSSSSCEEECSSSSCEEECHHHHHHHHHHHTCC
T ss_pred             CccCCCcCeECCCCCcccCCHHHHHHHHHHHccC
Confidence            467777788888888888888888888 777765

>1rim_A E6APC2 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1

Probab=98.19  E-value=8.8e-07  Score=53.86  Aligned_cols=31  Identities=23%  Similarity=0.474  Sum_probs=19.3

Q ss_pred             ccccccchhhcCCHHHHHHHHhhccCCCCCccc
Q psy8169          17 NHMCELCYKVFESRENLMRHLKIHDDKESKRFK   49 (843)
Q Consensus        17 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~   49 (843)
                      +|.|++|++.|.+...|..|+++|++  ++||.
T Consensus         2 p~~C~~C~k~F~~~~~L~~H~~~H~~--~~~~~   32 (33)
T 1rim_A            2 KFACPECPKRFMRSDHLSKHITLHEL--LGEER   32 (33)
T ss_dssp             CCCCSSSCCCCSSHHHHHHHHHHHTT--TCCCC
T ss_pred             cccCCCCCchhCCHHHHHHHHHHhCC--CCCCC
Confidence            56666666666666666666666665  35553

>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A

Probab=98.18  E-value=5e-07  Score=56.88  Aligned_cols=35  Identities=34%  Similarity=0.550  Sum_probs=31.8

Q ss_pred             hhhccccCCCCCCccchhhcccccccccccccccccchhhhhhhHHHHhhhhhhhcC
Q psy8169         681 HIRIFHTQNQPQHTNVIEVALGARANAAFIDRIRCELCDKSFTRKDSLKKHNRIFHG  737 (843)
Q Consensus       681 H~~~~H~~~~p~~~~~~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~L~~H~~~~H~  737 (843)
                      |++. |.+++|                     |+|+.|++.|.....|..|++.|++
T Consensus         2 H~~~-h~~~k~---------------------~~C~~C~k~f~~~~~l~~H~~~H~~   36 (37)
T 1p7a_A            2 STRG-STGIKP---------------------FQCPDCDRSFSRSDHLALHRKRHML   36 (37)
T ss_dssp             CSST-TCCSSS---------------------BCCTTTCCCBSSHHHHHHHHGGGTC
T ss_pred             CCCc-CCCCCC---------------------ccCCCCCcccCcHHHHHHHHHHhcc
Confidence            7777 889988                     9999999999999999999998664

>2elo_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.16  E-value=6e-07  Score=56.50  Aligned_cols=27  Identities=30%  Similarity=0.597  Sum_probs=24.8

Q ss_pred             ccccchhhhhhhHHHHhhhhhhhcCCCC
Q psy8169         713 IRCELCDKSFTRKDSLKKHNRIFHGGAD  740 (843)
Q Consensus       713 ~~C~~C~~~f~~~~~L~~H~~~~H~~~~  740 (843)
                      |+|++|++.|..+..|..|++.|++ ++
T Consensus        10 ~~C~~C~k~f~~~~~l~~H~~~h~~-~k   36 (37)
T 2elo_A           10 YSCPVCEKSFSEDRLIKSHIKTNHP-EV   36 (37)
T ss_dssp             CEETTTTEECSSHHHHHHHHHHHCS-SC
T ss_pred             cCCCCCCCccCCHHHHHHHHHHHcC-CC
Confidence            9999999999999999999999776 44

>2elq_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.14  E-value=1.1e-06  Score=54.89  Aligned_cols=33  Identities=27%  Similarity=0.405  Sum_probs=26.3

Q ss_pred             hhcCCCCccccccchhhcCCHHHHHHHHhhccC
Q psy8169          10 KSHEYVENHMCELCYKVFESRENLMRHLKIHDD   42 (843)
Q Consensus        10 ~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~   42 (843)
                      ++|.++++|.|++|++.|.+...|..|+++|.+
T Consensus         2 ~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~   34 (36)
T 2elq_A            2 SSGSSGKPFKCSLCEYATRSKSNLKAHMNRHST   34 (36)
T ss_dssp             CSSCCCCSEECSSSSCEESCHHHHHHHHHHSST
T ss_pred             CCCCCCCCccCCCCCchhCCHHHHHHHHHHhcc
Confidence            357778888888888888888888888888875

>2elv_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.13  E-value=9.7e-07  Score=55.07  Aligned_cols=32  Identities=25%  Similarity=0.400  Sum_probs=25.1

Q ss_pred             hcCCCCccccccchhhcCCHHHHHHHHhhccC
Q psy8169          11 SHEYVENHMCELCYKVFESRENLMRHLKIHDD   42 (843)
Q Consensus        11 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~   42 (843)
                      +|.++++|.|++|++.|.....|..|+++|++
T Consensus         3 ~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~   34 (36)
T 2elv_A            3 SGSSGLLYDCHICERKFKNELDRDRHMLVHGD   34 (36)
T ss_dssp             CSCCCCCEECSSSCCEESSHHHHHHHHTTTST
T ss_pred             CCCCCCCeECCCCCCccCCHHHHHHHHHHhcC
Confidence            56777788888888888888888888887765

>2elt_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.12  E-value=1.3e-06  Score=54.54  Aligned_cols=32  Identities=25%  Similarity=0.292  Sum_probs=25.6

Q ss_pred             hcCCCCccccccchhhcCCHHHHHHHHhhccC
Q psy8169          11 SHEYVENHMCELCYKVFESRENLMRHLKIHDD   42 (843)
Q Consensus        11 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~   42 (843)
                      +|.++++|.|++|++.|.....|..|+++|.+
T Consensus         3 ~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~   34 (36)
T 2elt_A            3 SGSSGKPYKCPQCSYASAIKANLNVHLRKHTG   34 (36)
T ss_dssp             CSCCCCSEECSSSSCEESSHHHHHHHHHHHTC
T ss_pred             CCCCCCCCCCCCCCcccCCHHHHHHHHHHccC
Confidence            57778888888888888888888888888775

>1njq_A Superman protein; zinc-finger, peptide-zinc complex, beta-BETA-ALFA motif, metal binding protein; NMR {Synthetic} SCOP: g.37.1.3 PDB: 2l1o_A

Probab=98.11  E-value=1.4e-06  Score=55.44  Aligned_cols=35  Identities=23%  Similarity=0.504  Sum_probs=31.4

Q ss_pred             CCcccccccccccCCHHHHHHhHHhhccCCCceeCC
Q psy8169          45 SKRFKCEQCDKRFSSNAELNKHSSAIHQRLKLHECD   80 (843)
Q Consensus        45 ~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~C~   80 (843)
                      ++||.|+.|++.|.+...|..|+ ..|.+++||.+.
T Consensus         4 ~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~k~~~~~   38 (39)
T 1njq_A            4 PRSYTCSFCKREFRSAQALGGHM-NVHRRDRARLRL   38 (39)
T ss_dssp             SSSEECTTTCCEESSHHHHHHHH-HTTCCSCTTTTC
T ss_pred             CCceECCCCCcccCCHHHHHHHH-HHcCCCccceec
Confidence            58999999999999999999998 679999998753

>2elp_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.10  E-value=7.7e-07  Score=55.96  Aligned_cols=33  Identities=24%  Similarity=0.379  Sum_probs=25.6

Q ss_pred             hhcCCCCccccccchhhcCCH-HHHHHHHhhccC
Q psy8169          10 KSHEYVENHMCELCYKVFESR-ENLMRHLKIHDD   42 (843)
Q Consensus        10 ~~h~~~~~~~C~~C~~~f~~~-~~l~~H~~~h~~   42 (843)
                      ++|+++++|.|++|++.|... ..|..|+++|++
T Consensus         2 ~~h~~~k~~~C~~C~k~f~~~~~~L~~H~~~H~~   35 (37)
T 2elp_A            2 SSGSSGRAMKCPYCDFYFMKNGSDLQRHIWAHEG   35 (37)
T ss_dssp             CSCCCCCCEECSSSSCEECSSCHHHHHHHHHHHT
T ss_pred             CCCCCCCCeECCCCChhhccCHHHHHHHHHhcCC
Confidence            467777788888888888887 788888877765

>2elr_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.10  E-value=1.8e-06  Score=53.84  Aligned_cols=32  Identities=31%  Similarity=0.603  Sum_probs=25.8

Q ss_pred             hcCCCCccccccchhhcCCHHHHHHHHhhccC
Q psy8169          11 SHEYVENHMCELCYKVFESRENLMRHLKIHDD   42 (843)
Q Consensus        11 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~   42 (843)
                      +|.++++|.|++|++.|.+...|..|+++|++
T Consensus         3 ~h~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~   34 (36)
T 2elr_A            3 SGSSGKTHLCDMCGKKFKSKGTLKSHKLLHTA   34 (36)
T ss_dssp             CCCCCSSCBCTTTCCBCSSHHHHHHHHHHHSS
T ss_pred             CCCCCCCeecCcCCCCcCchHHHHHHHHHhcC
Confidence            46778888888888888888888888888876

>1rim_A E6APC2 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1

Probab=98.09  E-value=1.7e-06  Score=52.53  Aligned_cols=32  Identities=34%  Similarity=0.699  Sum_probs=29.3

Q ss_pred             CcccccccccccCCHHHHHHhHHhhccCCCcee
Q psy8169          46 KRFKCEQCDKRFSSNAELNKHSSAIHQRLKLHE   78 (843)
Q Consensus        46 ~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~   78 (843)
                      +||.|+.|++.|.....|..|+ .+|.++++|.
T Consensus         1 kp~~C~~C~k~F~~~~~L~~H~-~~H~~~~~~~   32 (33)
T 1rim_A            1 YKFACPECPKRFMRSDHLSKHI-TLHELLGEER   32 (33)
T ss_dssp             CCCCCSSSCCCCSSHHHHHHHH-HHHTTTCCCC
T ss_pred             CcccCCCCCchhCCHHHHHHHH-HHhCCCCCCC
Confidence            5899999999999999999998 7799999875

>2elx_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}

Probab=98.05  E-value=2.3e-06  Score=52.88  Aligned_cols=32  Identities=19%  Similarity=0.436  Sum_probs=22.9

Q ss_pred             hcCCCceeccccchhcCChhhHHHHHHHccCC
Q psy8169         298 HMDDNQIQCRFCNKYFSRNYNLKQHMKTCTKN  329 (843)
Q Consensus       298 H~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~  329 (843)
                      |.++++|.|..|++.|.....|..|+++|+++
T Consensus         2 h~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~   33 (35)
T 2elx_A            2 SSGSSGYVCALCLKKFVSSIRLRSHIREVHGA   33 (35)
T ss_dssp             CCCCCSEECSSSCCEESSHHHHHHHHHHTSCT
T ss_pred             CCCCCCeECCCCcchhCCHHHHHHHHHHHcCC
Confidence            56667777777777777777777777776654

>3iuf_A Zinc finger protein UBI-D4; structural genomics consortium (SGC), C2H2, APO metal-binding, nucleus, phosphoprotein, transcription, TRAN regulation; 1.80A {Homo sapiens}

Probab=98.04  E-value=1.8e-06  Score=57.93  Aligned_cols=33  Identities=21%  Similarity=0.417  Sum_probs=23.8

Q ss_pred             hcCCCCccccccchhhcCCHHHHHHHHh-hccCC
Q psy8169          11 SHEYVENHMCELCYKVFESRENLMRHLK-IHDDK   43 (843)
Q Consensus        11 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~-~h~~~   43 (843)
                      +|+++++|.|.+|++.|.....|..|++ +|.++
T Consensus         1 ~Ht~~kp~~C~~C~k~F~~~~~L~~H~~~~H~~e   34 (48)
T 3iuf_A            1 GEDRDKPYACDICGKRYKNRPGLSYHYAHSHLAE   34 (48)
T ss_dssp             -CTTTSCEECTTTCCEESSHHHHHHHHHHSSCC-
T ss_pred             CCCCCcCEECCCcCcccCCHHHHHHHhhhhcCCC
Confidence            4677777777777777777777777777 77664

>2eln_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.04  E-value=3e-06  Score=52.75  Aligned_cols=31  Identities=23%  Similarity=0.444  Sum_probs=21.8

Q ss_pred             hcCCCceeccc--cchhcCChhhHHHHHHHccC
Q psy8169         298 HMDDNQIQCRF--CNKYFSRNYNLKQHMKTCTK  328 (843)
Q Consensus       298 H~~~~~~~C~~--C~~~f~~~~~L~~H~~~h~~  328 (843)
                      +.+++||+|+.  |+++|.+...|..|+++|++
T Consensus         4 ~~gekp~~C~~~~C~k~F~~~~~L~~H~r~Htg   36 (38)
T 2eln_A            4 GSSGILLKCPTDGCDYSTPDKYKLQAHLKVHTA   36 (38)
T ss_dssp             SSCCCCEECSSSSCCCEESCHHHHHHHHHHHSC
T ss_pred             CCCCCCCCCCCCCCCCccCCHHHHHHHHHhcCC
Confidence            45667777765  77777777777777777764

>1srk_A Zinc finger protein ZFPM1; classical zinc finger, transcription; NMR {Mus musculus} SCOP: g.37.1.1

Probab=98.03  E-value=2.2e-06  Score=53.00  Aligned_cols=32  Identities=25%  Similarity=0.487  Sum_probs=23.0

Q ss_pred             hcCCCceeccccchhcCChhhHHHHHHHccCC
Q psy8169         298 HMDDNQIQCRFCNKYFSRNYNLKQHMKTCTKN  329 (843)
Q Consensus       298 H~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~  329 (843)
                      |.++++|.|..|++.|.....|..|+++|+++
T Consensus         2 H~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~   33 (35)
T 1srk_A            2 SSGKRPFVCRICLSAFTTKANCARHLKVHTDT   33 (35)
T ss_dssp             CSCCSCEECSSSCCEESSHHHHHHHHGGGTSC
T ss_pred             CCCCcCeeCCCCCcccCCHHHHHHHHHHcCCC
Confidence            56677777777777777777777777776654

>1bhi_A CRE-BP1, ATF-2; CRE binding protein, transcriptional activation domain, Zn finger, DNA-binding regulatory protein; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.03  E-value=2.2e-06  Score=54.15  Aligned_cols=35  Identities=20%  Similarity=0.390  Sum_probs=24.0

Q ss_pred             cCCCCccccc--cchhhcCCHHHHHHHHhhccCCCCCcc
Q psy8169          12 HEYVENHMCE--LCYKVFESRENLMRHLKIHDDKESKRF   48 (843)
Q Consensus        12 h~~~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~~~   48 (843)
                      |+++++|.|.  .|++.|.+...|.+|+++|.+  ++||
T Consensus         1 H~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~--~k~~   37 (38)
T 1bhi_A            1 MSDDKPFLCTAPGCGQRFTNEDHLAVHKHKHEM--TLKF   37 (38)
T ss_dssp             CTTCCCEECCCTTTCCEESSHHHHHHHHHHHHT--TTTT
T ss_pred             CCCCcceECCCCCCCcccCCHHHHHHHHHHhCC--CCCC
Confidence            4566777777  477777777777777777766  3554

>2els_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.02  E-value=2.7e-06  Score=52.99  Aligned_cols=32  Identities=38%  Similarity=0.646  Sum_probs=24.1

Q ss_pred             hcCCCCccccccchhhcCCHHHHHHHHhhccC
Q psy8169          11 SHEYVENHMCELCYKVFESRENLMRHLKIHDD   42 (843)
Q Consensus        11 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~   42 (843)
                      +|.++++|.|++|++.|.....|..|+++|.+
T Consensus         3 ~~~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~   34 (36)
T 2els_A            3 SGSSGKIFTCEYCNKVFKFKHSLQAHLRIHTN   34 (36)
T ss_dssp             TTSCCCCEECTTTCCEESSHHHHHHHHHHHCC
T ss_pred             CCCCCCCEECCCCCceeCCHHHHHHHHHHhCC
Confidence            46677777777777777777777777777765

>1x6f_A Zinc finger protein 462; zinc finger domain, KIAA1803, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.00  E-value=1.4e-07  Score=72.81  Aligned_cols=49  Identities=20%  Similarity=0.262  Sum_probs=40.1

Q ss_pred             ccccchhhhhhhHHHHhhhhhhhcCCCCCCcchhhhhcCCcceeeeeecCCCCCCCCccccchhhchhhhhhhhhhhHHH
Q psy8169         713 IRCELCDKSFTRKDSLKKHNRIFHGGADPKVMDEQMARGSADFLEVVLNEDGEGEPVSITNEILCKICNRTFTRNYNLKK  792 (843)
Q Consensus       713 ~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~C~~~F~~~~~L~~  792 (843)
                      |+|++|++.|.....|..|++.|.+ ++|                                 |+|..|.    ....|..
T Consensus        26 y~C~~C~k~F~~~~~L~~H~~~Ht~-ekp---------------------------------~~C~~~~----~~~~~~~   67 (88)
T 1x6f_A           26 YQCKHCDSKLQSTAELTSHLNIHNE-EFQ---------------------------------KRAKRQE----RRKQLLS   67 (88)
T ss_dssp             EECSSSCCEESSHHHHHHHHHHHHH-HHH---------------------------------HHCCCCS----CCCCCCC
T ss_pred             CcCCCCCCEeCCHHHHHHHHHHhCC-CCC---------------------------------cccchhh----hHHHHHh
Confidence            9999999999999999999998665 666                                 9997765    4566777


Q ss_pred             HHhHhhc
Q psy8169         793 HMKTVHK  799 (843)
Q Consensus       793 H~~~~H~  799 (843)
                      |++.+-+
T Consensus        68 ~~~~~~~   74 (88)
T 1x6f_A           68 KQKYADG   74 (88)
T ss_dssp             CCCCCCC
T ss_pred             hhccccc
Confidence            7766655

>1fv5_A First zinc finger of U-shaped; CCHC, protein interaction, transcription; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1y0j_B 2l6z_B

Probab=97.98  E-value=2.8e-06  Score=51.89  Aligned_cols=29  Identities=34%  Similarity=0.620  Sum_probs=25.6

Q ss_pred             CCcccccccccccCCHHHHHHhHHhhccCCCceeCCC
Q psy8169          45 SKRFKCEQCDKRFSSNAELNKHSSAIHQRLKLHECDL   81 (843)
Q Consensus        45 ~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~C~~   81 (843)
                      ++||.|+.|+++|.+...|..|+        ||.|..
T Consensus         6 ekp~~C~~CgK~F~~~s~L~~H~--------py~C~~   34 (36)
T 1fv5_A            6 PARFMCLPCGIAFSSPSTLEAHQ--------AYYCSH   34 (36)
T ss_dssp             CCCCEETTTTEECSCHHHHHHHH--------HHTSTT
T ss_pred             ccCeECCCCCCccCCHhHccCcC--------CeECcC
Confidence            68999999999999999999997        777764

>2elm_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.93  E-value=2.4e-06  Score=53.58  Aligned_cols=33  Identities=15%  Similarity=0.241  Sum_probs=26.4

Q ss_pred             HHhcCCCceeccccchhcCChhhHHHH-HHHccC
Q psy8169         296 KMHMDDNQIQCRFCNKYFSRNYNLKQH-MKTCTK  328 (843)
Q Consensus       296 ~~H~~~~~~~C~~C~~~f~~~~~L~~H-~~~h~~  328 (843)
                      ++|.+++||.|..|++.|.....|..| ++.|++
T Consensus         2 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~~H~~   35 (37)
T 2elm_A            2 SSGSSGHLYYCSQCHYSSITKNCLKRHVIQKHSN   35 (37)
T ss_dssp             CSSSSSCEEECSSSSCEEECHHHHHHHHHHHTCC
T ss_pred             CccCCCcCeECCCCCcccCCHHHHHHHHHHHccC
Confidence            357788888888888888888888888 777764

>2epp_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=97.91  E-value=6.7e-06  Score=58.63  Aligned_cols=31  Identities=29%  Similarity=0.353  Sum_probs=21.4

Q ss_pred             cCCCCccccccchhhcCCHHHHHHHHhhccC
Q psy8169          12 HEYVENHMCELCYKVFESRENLMRHLKIHDD   42 (843)
Q Consensus        12 h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~   42 (843)
                      +.++++|.|.+|++.|.....|..|+++|++
T Consensus         8 ~~~ekpy~C~~CgK~F~~~s~L~~H~r~Htg   38 (66)
T 2epp_A            8 LREAGILPCGLCGKVFTDANRLRQHEAQHGV   38 (66)
T ss_dssp             CCCCCCCCCTTTCCCCSCHHHHHHHHHHHTT
T ss_pred             CCCccCcCCCCCCCccCCHHHHHhhhhhhCC
Confidence            5566677777777777777777777777765

>2elt_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.88  E-value=6.4e-06  Score=51.21  Aligned_cols=32  Identities=19%  Similarity=0.285  Sum_probs=23.4

Q ss_pred             HhcCCCceeccccchhcCChhhHHHHHHHccC
Q psy8169         297 MHMDDNQIQCRFCNKYFSRNYNLKQHMKTCTK  328 (843)
Q Consensus       297 ~H~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~  328 (843)
                      +|.++++|.|..|++.|.....|..|+++|++
T Consensus         3 ~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~   34 (36)
T 2elt_A            3 SGSSGKPYKCPQCSYASAIKANLNVHLRKHTG   34 (36)
T ss_dssp             CSCCCCSEECSSSSCEESSHHHHHHHHHHHTC
T ss_pred             CCCCCCCCCCCCCCcccCCHHHHHHHHHHccC
Confidence            35667777777777777777777777777754

>2elp_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.87  E-value=4.9e-06  Score=52.12  Aligned_cols=33  Identities=21%  Similarity=0.553  Sum_probs=24.9

Q ss_pred             HhcCCCceeccccchhcCCh-hhHHHHHHHccCC
Q psy8169         297 MHMDDNQIQCRFCNKYFSRN-YNLKQHMKTCTKN  329 (843)
Q Consensus       297 ~H~~~~~~~C~~C~~~f~~~-~~L~~H~~~h~~~  329 (843)
                      +|.++++|.|+.|++.|... ..|..|+++|+++
T Consensus         3 ~h~~~k~~~C~~C~k~f~~~~~~L~~H~~~H~~~   36 (37)
T 2elp_A            3 SGSSGRAMKCPYCDFYFMKNGSDLQRHIWAHEGV   36 (37)
T ss_dssp             SCCCCCCEECSSSSCEECSSCHHHHHHHHHHHTC
T ss_pred             CCCCCCCeECCCCChhhccCHHHHHHHHHhcCCC
Confidence            46677788888888888887 7888888777643

>2elq_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.87  E-value=7.8e-06  Score=50.78  Aligned_cols=32  Identities=22%  Similarity=0.409  Sum_probs=23.8

Q ss_pred             HhcCCCceeccccchhcCChhhHHHHHHHccC
Q psy8169         297 MHMDDNQIQCRFCNKYFSRNYNLKQHMKTCTK  328 (843)
Q Consensus       297 ~H~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~  328 (843)
                      .|.++++|.|..|++.|.....|..|+++|++
T Consensus         3 ~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~   34 (36)
T 2elq_A            3 SGSSGKPFKCSLCEYATRSKSNLKAHMNRHST   34 (36)
T ss_dssp             SSCCCCSEECSSSSCEESCHHHHHHHHHHSST
T ss_pred             CCCCCCCccCCCCCchhCCHHHHHHHHHHhcc
Confidence            36677777777777777777777777777754

>2kvg_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=97.86  E-value=5.5e-06  Score=47.44  Aligned_cols=25  Identities=24%  Similarity=0.401  Sum_probs=14.2

Q ss_pred             CccccccchhhcCCHHHHHHHHhhc
Q psy8169          16 ENHMCELCYKVFESRENLMRHLKIH   40 (843)
Q Consensus        16 ~~~~C~~C~~~f~~~~~l~~H~~~h   40 (843)
                      ++|.|+.|++.|.....|..|+++|
T Consensus         2 k~~~C~~C~k~f~~~~~l~~H~~~H   26 (27)
T 2kvg_A            2 APYRCPLCRAGCPSLASMQAHMRGH   26 (27)
T ss_dssp             CTEEETTTTEEESCHHHHHHHHTTC
T ss_pred             cCcCCCCCCcccCCHHHHHHHHHhc
Confidence            4555555555555555555555554

>2kvh_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=97.86  E-value=6.3e-06  Score=47.17  Aligned_cols=25  Identities=24%  Similarity=0.537  Sum_probs=14.8

Q ss_pred             CccccccchhhcCCHHHHHHHHhhc
Q psy8169          16 ENHMCELCYKVFESRENLMRHLKIH   40 (843)
Q Consensus        16 ~~~~C~~C~~~f~~~~~l~~H~~~h   40 (843)
                      ++|.|+.|++.|.+...|..|+++|
T Consensus         2 k~~~C~~C~k~f~~~~~l~~H~~~H   26 (27)
T 2kvh_A            2 KPFSCSLCPQRSRDFSAMTKHLRTH   26 (27)
T ss_dssp             CCEECSSSSCEESSHHHHHHHHHHC
T ss_pred             cCccCCCcChhhCCHHHHHHHHHHc
Confidence            4556666666666666666665555

>1va1_A Transcription factor SP1; C2H2 type zinc finger, DNA-binding protein; NMR {Homo sapiens}

Probab=97.85  E-value=6.8e-06  Score=51.43  Aligned_cols=31  Identities=29%  Similarity=0.622  Sum_probs=23.6

Q ss_pred             cCCCCcccccc--chhhcCCHHHHHHHHhhccC
Q psy8169          12 HEYVENHMCEL--CYKVFESRENLMRHLKIHDD   42 (843)
Q Consensus        12 h~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~   42 (843)
                      |+++++|.|.+  |++.|.+.+.|..|+++|++
T Consensus         3 ~~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~   35 (37)
T 1va1_A            3 PGKKKQHICHIQGCGKVYGKTSHLRAHLRWHTG   35 (37)
T ss_dssp             SSSCCCEECCSTTCCCEESCHHHHHHHHHHHHT
T ss_pred             CCCCCCCCCCCCCCCCccCCHHHHHHHHHhcCC
Confidence            56777788874  88888888888888777765

>2kvf_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=97.85  E-value=6.4e-06  Score=47.65  Aligned_cols=26  Identities=23%  Similarity=0.583  Sum_probs=15.9

Q ss_pred             CccccccchhhcCCHHHHHHHHhhcc
Q psy8169          16 ENHMCELCYKVFESRENLMRHLKIHD   41 (843)
Q Consensus        16 ~~~~C~~C~~~f~~~~~l~~H~~~h~   41 (843)
                      ++|.|++|++.|.+...|..|+++|+
T Consensus         2 k~~~C~~C~k~f~~~~~l~~H~~~h~   27 (28)
T 2kvf_A            2 RPYSCSVCGKRFSLKHQMETHYRVHT   27 (28)
T ss_dssp             CSEECSSSCCEESCHHHHHHHHTTSC
T ss_pred             cCccCCCCCcccCCHHHHHHHHHhcC
Confidence            45666666666666666666666554

>2kfq_A FP1; protein, de novo protein; NMR {Synthetic}

Probab=97.85  E-value=4.4e-06  Score=50.24  Aligned_cols=28  Identities=36%  Similarity=0.638  Sum_probs=27.0

Q ss_pred             CCCccccccccchhhhhhhhhccccCCCC
Q psy8169         663 IPCTLCDKTFTRKDSLKKHIRIFHTQNQP  691 (843)
Q Consensus       663 ~~C~~C~~~f~~~~~L~~H~~~~H~~~~p  691 (843)
                      |.|+.|++.|...+.|..|+++ |++++|
T Consensus         3 ~~C~~C~k~f~~~~~L~~H~~~-H~~~kp   30 (32)
T 2kfq_A            3 FACPACPKRFMRSDALSKHIKT-AFIVVA   30 (32)
T ss_dssp             SSSSSSCTTHHHHHTTSSSTTS-SSSSSS
T ss_pred             CCCCCCCcccCCHHHHHHHHHH-HccCCC
Confidence            9999999999999999999998 999988

>2kfq_A FP1; protein, de novo protein; NMR {Synthetic}

Probab=97.84  E-value=3.1e-06  Score=50.92  Aligned_cols=29  Identities=31%  Similarity=0.502  Sum_probs=25.5

Q ss_pred             cccccchhhhhhhHHHHhhhhhhhcCCCCC
Q psy8169         712 RIRCELCDKSFTRKDSLKKHNRIFHGGADP  741 (843)
Q Consensus       712 ~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~  741 (843)
                      +|+|++|+++|..++.|..|++.|.+ ++|
T Consensus         2 p~~C~~C~k~f~~~~~L~~H~~~H~~-~kp   30 (32)
T 2kfq_A            2 AFACPACPKRFMRSDALSKHIKTAFI-VVA   30 (32)
T ss_dssp             CSSSSSSCTTHHHHHTTSSSTTSSSS-SSS
T ss_pred             CCCCCCCCcccCCHHHHHHHHHHHcc-CCC
Confidence            49999999999999999999998655 665

>2epp_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=97.83  E-value=1e-05  Score=57.62  Aligned_cols=39  Identities=18%  Similarity=0.331  Sum_probs=24.3

Q ss_pred             CCCcccccccccccccCHHHHHHHHhhcCCCcccccchh
Q psy8169         150 TDGMKFECYVCSKVLATSHSLKRHLLIHNGPKYTCEICA  188 (843)
Q Consensus       150 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~C~~C~  188 (843)
                      ..+++|.|..|++.|.....|..|+++|.+....+.+++
T Consensus         9 ~~ekpy~C~~CgK~F~~~s~L~~H~r~Htg~~~~~~~~~   47 (66)
T 2epp_A            9 REAGILPCGLCGKVFTDANRLRQHEAQHGVTSLQLGYID   47 (66)
T ss_dssp             CCCCCCCCTTTCCCCSCHHHHHHHHHHHTTTSCCCCSCC
T ss_pred             CCccCcCCCCCCCccCCHHHHHhhhhhhCCCcccccccc
Confidence            345666666666666666666666666666555555443

>2elv_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.80  E-value=9.2e-06  Score=50.46  Aligned_cols=32  Identities=16%  Similarity=0.363  Sum_probs=22.5

Q ss_pred             HhcCCCceeccccchhcCChhhHHHHHHHccC
Q psy8169         297 MHMDDNQIQCRFCNKYFSRNYNLKQHMKTCTK  328 (843)
Q Consensus       297 ~H~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~  328 (843)
                      .|.++++|.|..|++.|.....|..|+++|++
T Consensus         3 ~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~   34 (36)
T 2elv_A            3 SGSSGLLYDCHICERKFKNELDRDRHMLVHGD   34 (36)
T ss_dssp             CSCCCCCEECSSSCCEESSHHHHHHHHTTTST
T ss_pred             CCCCCCCeECCCCCCccCCHHHHHHHHHHhcC
Confidence            35666777777777777777777777776654

>1znf_A 31ST zinc finger from XFIN; zinc finger DNA binding domain; NMR {Xenopus laevis} SCOP: g.37.1.1

Probab=97.79  E-value=1e-05  Score=46.24  Aligned_cols=26  Identities=31%  Similarity=0.710  Sum_probs=19.0

Q ss_pred             ccccccchhhcCCHHHHHHHHhhccC
Q psy8169          17 NHMCELCYKVFESRENLMRHLKIHDD   42 (843)
Q Consensus        17 ~~~C~~C~~~f~~~~~l~~H~~~h~~   42 (843)
                      +|.|++|++.|.+...|..|+++|++
T Consensus         1 ~~~C~~C~k~f~~~~~l~~H~~~h~~   26 (27)
T 1znf_A            1 XYKCGLCERSFVEKSALSRHQRVHKN   26 (27)
T ss_dssp             -CBCSSSCCBCSSHHHHHHHGGGTCC
T ss_pred             CccCCCCCCcCCCHHHHHHHHHHcCC
Confidence            46777777777777777777777764

>2els_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.78  E-value=1.4e-05  Score=49.65  Aligned_cols=31  Identities=26%  Similarity=0.578  Sum_probs=20.4

Q ss_pred             hcCCCceeccccchhcCChhhHHHHHHHccC
Q psy8169         298 HMDDNQIQCRFCNKYFSRNYNLKQHMKTCTK  328 (843)
Q Consensus       298 H~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~  328 (843)
                      |.++++|.|+.|++.|.....|..|+++|++
T Consensus         4 ~~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~   34 (36)
T 2els_A            4 GSSGKIFTCEYCNKVFKFKHSLQAHLRIHTN   34 (36)
T ss_dssp             TSCCCCEECTTTCCEESSHHHHHHHHHHHCC
T ss_pred             CCCCCCEECCCCCceeCCHHHHHHHHHHhCC
Confidence            4556666666666666666666666666654

>2elr_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.78  E-value=1.4e-05  Score=49.57  Aligned_cols=31  Identities=26%  Similarity=0.369  Sum_probs=20.7

Q ss_pred             hcCCCceeccccchhcCChhhHHHHHHHccC
Q psy8169         298 HMDDNQIQCRFCNKYFSRNYNLKQHMKTCTK  328 (843)
Q Consensus       298 H~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~  328 (843)
                      |.++++|.|..|++.|.+...|..|+++|++
T Consensus         4 h~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~   34 (36)
T 2elr_A            4 GSSGKTHLCDMCGKKFKSKGTLKSHKLLHTA   34 (36)
T ss_dssp             CCCCSSCBCTTTCCBCSSHHHHHHHHHHHSS
T ss_pred             CCCCCCeecCcCCCCcCchHHHHHHHHHhcC
Confidence            5566667777777777777777777666654

>3iuf_A Zinc finger protein UBI-D4; structural genomics consortium (SGC), C2H2, APO metal-binding, nucleus, phosphoprotein, transcription, TRAN regulation; 1.80A {Homo sapiens}

Probab=97.78  E-value=1e-05  Score=54.21  Aligned_cols=35  Identities=17%  Similarity=0.307  Sum_probs=28.5

Q ss_pred             HhcCCCceeccccchhcCChhhHHHHHH-HccCCCC
Q psy8169         297 MHMDDNQIQCRFCNKYFSRNYNLKQHMK-TCTKNVS  331 (843)
Q Consensus       297 ~H~~~~~~~C~~C~~~f~~~~~L~~H~~-~h~~~~~  331 (843)
                      +|+++++|.|.+|++.|.....|..|++ +|.++..
T Consensus         1 ~Ht~~kp~~C~~C~k~F~~~~~L~~H~~~~H~~e~~   36 (48)
T 3iuf_A            1 GEDRDKPYACDICGKRYKNRPGLSYHYAHSHLAEEE   36 (48)
T ss_dssp             -CTTTSCEECTTTCCEESSHHHHHHHHHHSSCC---
T ss_pred             CCCCCcCEECCCcCcccCCHHHHHHHhhhhcCCCCC
Confidence            4788999999999999999999999999 8876544

>2m0d_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=97.76  E-value=1.2e-05  Score=47.31  Aligned_cols=27  Identities=33%  Similarity=0.695  Sum_probs=17.8

Q ss_pred             CccccccchhhcCCHHHHHHHHhhccC
Q psy8169          16 ENHMCELCYKVFESRENLMRHLKIHDD   42 (843)
Q Consensus        16 ~~~~C~~C~~~f~~~~~l~~H~~~h~~   42 (843)
                      ++|.|+.|++.|.....|..|+++|.+
T Consensus         2 k~~~C~~C~~~f~~~~~l~~H~~~h~~   28 (30)
T 2m0d_A            2 KPYQCDYCGRSFSDPTSKMRHLETHDT   28 (30)
T ss_dssp             CCEECTTTCCEESCHHHHHHHHHTTCC
T ss_pred             cCccCCCCCcccCCHHHHHHHHHHhcc
Confidence            456666666666666666666666654

>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A 1are_A

Probab=97.76  E-value=1.5e-05  Score=46.49  Aligned_cols=26  Identities=35%  Similarity=0.861  Sum_probs=18.2

Q ss_pred             ccccccchhhcCCHHHHHHHHhhccC
Q psy8169          17 NHMCELCYKVFESRENLMRHLKIHDD   42 (843)
Q Consensus        17 ~~~C~~C~~~f~~~~~l~~H~~~h~~   42 (843)
                      +|.|++|++.|.....|..|+++|++
T Consensus         2 ~~~C~~C~~~f~~~~~l~~H~~~h~~   27 (29)
T 1ard_A            2 SFVCEVCTRAFARQEHLKRHYRSHTN   27 (29)
T ss_dssp             CCBCTTTCCBCSSHHHHHHHHHHHSC
T ss_pred             CeECCCCCcccCCHHHHHHHHHHhcC
Confidence            56777777777777777777777665

>1rik_A E6APC1 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1 PDB: 1sp1_A 1va3_A

Probab=97.72  E-value=1.1e-05  Score=47.10  Aligned_cols=26  Identities=27%  Similarity=0.614  Sum_probs=17.1

Q ss_pred             ccccccchhhcCCHHHHHHHHhhccC
Q psy8169          17 NHMCELCYKVFESRENLMRHLKIHDD   42 (843)
Q Consensus        17 ~~~C~~C~~~f~~~~~l~~H~~~h~~   42 (843)
                      +|.|+.|++.|.+...|..|+++|.+
T Consensus         2 ~~~C~~C~k~f~~~~~l~~H~~~H~~   27 (29)
T 1rik_A            2 KFACPECPKRFMRSDHLTLHILLHEN   27 (29)
T ss_dssp             CEECSSSSCEESCSHHHHHHHTGGGS
T ss_pred             CccCCCCCchhCCHHHHHHHHHHhcC
Confidence            56666666666666666666666654

>2m0d_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=97.71  E-value=1.9e-05  Score=46.41  Aligned_cols=28  Identities=25%  Similarity=0.543  Sum_probs=17.7

Q ss_pred             cccccccccccccCHHHHHHHHhhcCCC
Q psy8169         153 MKFECYVCSKVLATSHSLKRHLLIHNGP  180 (843)
Q Consensus       153 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~  180 (843)
                      ++|.|..|++.|.....|..|+++|.++
T Consensus         2 k~~~C~~C~~~f~~~~~l~~H~~~h~~~   29 (30)
T 2m0d_A            2 KPYQCDYCGRSFSDPTSKMRHLETHDTD   29 (30)
T ss_dssp             CCEECTTTCCEESCHHHHHHHHHTTCCC
T ss_pred             cCccCCCCCcccCCHHHHHHHHHHhccC
Confidence            4566666666666666666666666553

>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A 1are_A

Probab=97.69  E-value=2.3e-05  Score=45.67  Aligned_cols=27  Identities=37%  Similarity=0.717  Sum_probs=15.8

Q ss_pred             ccccccccccccCHHHHHHHHhhcCCC
Q psy8169         154 KFECYVCSKVLATSHSLKRHLLIHNGP  180 (843)
Q Consensus       154 ~~~C~~C~~~f~~~~~l~~H~~~h~~~  180 (843)
                      +|.|..|++.|.....|..|+++|.++
T Consensus         2 ~~~C~~C~~~f~~~~~l~~H~~~h~~~   28 (29)
T 1ard_A            2 SFVCEVCTRAFARQEHLKRHYRSHTNE   28 (29)
T ss_dssp             CCBCTTTCCBCSSHHHHHHHHHHHSCC
T ss_pred             CeECCCCCcccCCHHHHHHHHHHhcCC
Confidence            455666666666666666666655543

>2kvf_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=97.69  E-value=1.9e-05  Score=45.56  Aligned_cols=26  Identities=27%  Similarity=0.697  Sum_probs=15.7

Q ss_pred             cccccccccccccCHHHHHHHHhhcC
Q psy8169         153 MKFECYVCSKVLATSHSLKRHLLIHN  178 (843)
Q Consensus       153 ~~~~C~~C~~~f~~~~~l~~H~~~h~  178 (843)
                      ++|.|..|++.|.+...|..|+++|.
T Consensus         2 k~~~C~~C~k~f~~~~~l~~H~~~h~   27 (28)
T 2kvf_A            2 RPYSCSVCGKRFSLKHQMETHYRVHT   27 (28)
T ss_dssp             CSEECSSSCCEESCHHHHHHHHTTSC
T ss_pred             cCccCCCCCcccCCHHHHHHHHHhcC
Confidence            35666666666666666666666554

>2lvu_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=96.86  E-value=5.5e-06  Score=46.90  Aligned_cols=24  Identities=33%  Similarity=0.600  Sum_probs=22.4

Q ss_pred             cccccchhhhhhhHHHHhhhhhhh
Q psy8169         712 RIRCELCDKSFTRKDSLKKHNRIF  735 (843)
Q Consensus       712 ~~~C~~C~~~f~~~~~L~~H~~~~  735 (843)
                      +|.|+.||+.|.....|..|++.|
T Consensus         2 p~~C~~C~k~f~~~~~l~~H~~~H   25 (26)
T 2lvu_A            2 PYVCERCGKRFVQSSQLANHIRHH   25 (26)
Confidence            499999999999999999999875

>1bhi_A CRE-BP1, ATF-2; CRE binding protein, transcriptional activation domain, Zn finger, DNA-binding regulatory protein; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=97.67  E-value=2.8e-05  Score=48.89  Aligned_cols=32  Identities=22%  Similarity=0.425  Sum_probs=17.9

Q ss_pred             cCCCceecc--ccchhcCChhhHHHHHHHccCCC
Q psy8169         299 MDDNQIQCR--FCNKYFSRNYNLKQHMKTCTKNV  330 (843)
Q Consensus       299 ~~~~~~~C~--~C~~~f~~~~~L~~H~~~h~~~~  330 (843)
                      +++++|.|.  .|++.|.....|..|+++|+++.
T Consensus         2 ~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k   35 (38)
T 1bhi_A            2 SDDKPFLCTAPGCGQRFTNEDHLAVHKHKHEMTL   35 (38)
T ss_dssp             TTCCCEECCCTTTCCEESSHHHHHHHHHHHHTTT
T ss_pred             CCCcceECCCCCCCcccCCHHHHHHHHHHhCCCC
Confidence            445555555  36666655555666655555443

>2kvh_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=97.67  E-value=2.2e-05  Score=44.75  Aligned_cols=25  Identities=24%  Similarity=0.563  Sum_probs=14.5

Q ss_pred             cccccccccccccCHHHHHHHHhhc
Q psy8169         153 MKFECYVCSKVLATSHSLKRHLLIH  177 (843)
Q Consensus       153 ~~~~C~~C~~~f~~~~~l~~H~~~h  177 (843)
                      ++|.|..|++.|.....|..|+++|
T Consensus         2 k~~~C~~C~k~f~~~~~l~~H~~~H   26 (27)
T 2kvh_A            2 KPFSCSLCPQRSRDFSAMTKHLRTH   26 (27)
T ss_dssp             CCEECSSSSCEESSHHHHHHHHHHC
T ss_pred             cCccCCCcChhhCCHHHHHHHHHHc
Confidence            3455666666666666666665554

>2m0f_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=97.67  E-value=1.7e-05  Score=46.25  Aligned_cols=26  Identities=42%  Similarity=0.717  Sum_probs=18.1

Q ss_pred             ccccccchhhcCCHHHHHHHHhhccC
Q psy8169          17 NHMCELCYKVFESRENLMRHLKIHDD   42 (843)
Q Consensus        17 ~~~C~~C~~~f~~~~~l~~H~~~h~~   42 (843)
                      +|.|++|++.|.+...|..|+++|.+
T Consensus         2 ~~~C~~C~k~f~~~~~l~~H~~~H~~   27 (29)
T 2m0f_A            2 PLKCRECGKQFTTSGNLKRHLRIHSG   27 (29)
T ss_dssp             CEECTTTSCEESCHHHHHHHHHHHHT
T ss_pred             CccCCCCCCccCChhHHHHHHHHhcC
Confidence            56677777777777777777776665

>2kvg_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=97.66  E-value=1.9e-05  Score=45.08  Aligned_cols=25  Identities=20%  Similarity=0.446  Sum_probs=14.2

Q ss_pred             cccccccccccccCHHHHHHHHhhc
Q psy8169         153 MKFECYVCSKVLATSHSLKRHLLIH  177 (843)
Q Consensus       153 ~~~~C~~C~~~f~~~~~l~~H~~~h  177 (843)
                      ++|.|..|++.|.....|..|+++|
T Consensus         2 k~~~C~~C~k~f~~~~~l~~H~~~H   26 (27)
T 2kvg_A            2 APYRCPLCRAGCPSLASMQAHMRGH   26 (27)
T ss_dssp             CTEEETTTTEEESCHHHHHHHHTTC
T ss_pred             cCcCCCCCCcccCCHHHHHHHHHhc
Confidence            3455555555555555555555554

>1rik_A E6APC1 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1 PDB: 1sp1_A 1va3_A

Probab=97.66  E-value=1.6e-05  Score=46.33  Aligned_cols=26  Identities=38%  Similarity=0.745  Sum_probs=15.2

Q ss_pred             ccccccccccccCHHHHHHHHhhcCC
Q psy8169         154 KFECYVCSKVLATSHSLKRHLLIHNG  179 (843)
Q Consensus       154 ~~~C~~C~~~f~~~~~l~~H~~~h~~  179 (843)
                      +|.|..|++.|.....|..|+++|.+
T Consensus         2 ~~~C~~C~k~f~~~~~l~~H~~~H~~   27 (29)
T 1rik_A            2 KFACPECPKRFMRSDHLTLHILLHEN   27 (29)
T ss_dssp             CEECSSSSCEESCSHHHHHHHTGGGS
T ss_pred             CccCCCCCchhCCHHHHHHHHHHhcC
Confidence            45566666666666666666655554

>1znf_A 31ST zinc finger from XFIN; zinc finger DNA binding domain; NMR {Xenopus laevis} SCOP: g.37.1.1

Probab=97.65  E-value=2.5e-05  Score=44.51  Aligned_cols=26  Identities=23%  Similarity=0.675  Sum_probs=15.6

Q ss_pred             ccccccccccccCHHHHHHHHhhcCC
Q psy8169         154 KFECYVCSKVLATSHSLKRHLLIHNG  179 (843)
Q Consensus       154 ~~~C~~C~~~f~~~~~l~~H~~~h~~  179 (843)
                      +|.|..|++.|.+...|..|+++|.+
T Consensus         1 ~~~C~~C~k~f~~~~~l~~H~~~h~~   26 (27)
T 1znf_A            1 XYKCGLCERSFVEKSALSRHQRVHKN   26 (27)
T ss_dssp             -CBCSSSCCBCSSHHHHHHHGGGTCC
T ss_pred             CccCCCCCCcCCCHHHHHHHHHHcCC
Confidence            35666666666666666666666554

>2lvu_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=96.82  E-value=6.6e-06  Score=46.57  Aligned_cols=24  Identities=33%  Similarity=0.625  Sum_probs=14.9

Q ss_pred             ccccccchhhcCCHHHHHHHHhhc
Q psy8169          17 NHMCELCYKVFESRENLMRHLKIH   40 (843)
Q Consensus        17 ~~~C~~C~~~f~~~~~l~~H~~~h   40 (843)
                      +|.|++|++.|.+...|..|+++|
T Consensus         2 p~~C~~C~k~f~~~~~l~~H~~~H   25 (26)
T 2lvu_A            2 PYVCERCGKRFVQSSQLANHIRHH   25 (26)
Confidence            556666666666666666666555

>1ncs_A Peptide M30F, transcriptional factor SWI5; DNA binding motif, transcription regulation, zinc-finger; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=97.65  E-value=1.8e-06  Score=57.66  Aligned_cols=34  Identities=24%  Similarity=0.353  Sum_probs=18.4

Q ss_pred             HhhcCCCCccccc--cchhhcCCHHHHHHHHhhccC
Q psy8169           9 IKSHEYVENHMCE--LCYKVFESRENLMRHLKIHDD   42 (843)
Q Consensus         9 ~~~h~~~~~~~C~--~C~~~f~~~~~l~~H~~~h~~   42 (843)
                      ..+|+++++|.|+  .|++.|.....|..|+++|++
T Consensus        10 ~~~H~~~k~~~C~~~~C~k~F~~~~~L~~H~~~H~~   45 (47)
T 1ncs_A           10 YVKEMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLE   45 (47)
T ss_dssp             SCEEETTTEEECCCTTCCCEECSSSSHHHHHHHHTT
T ss_pred             HhccCCCCCeECCCCCCCCccCCHHHHHHHHHHccC
Confidence            3445555555553  455555555555555555554

>1sp2_A SP1F2; zinc finger, transcription activation; NMR {Homo sapiens} SCOP: g.37.1.1 PDB: 1va2_A

Probab=97.64  E-value=2.7e-05  Score=46.21  Aligned_cols=27  Identities=33%  Similarity=0.663  Sum_probs=18.7

Q ss_pred             Cccccc--cchhhcCCHHHHHHHHhhccC
Q psy8169          16 ENHMCE--LCYKVFESRENLMRHLKIHDD   42 (843)
Q Consensus        16 ~~~~C~--~C~~~f~~~~~l~~H~~~h~~   42 (843)
                      ++|.|+  .|++.|.....|..|+++|++
T Consensus         1 kp~~C~~~~C~k~f~~~~~L~~H~~~H~~   29 (31)
T 1sp2_A            1 RPFMCTWSYCGKRFTRSDELQRHKRTHTG   29 (31)
T ss_dssp             CCCBCCSTTCCCBCSSHHHHHHHHTTTSC
T ss_pred             CCcCCcCCCCCcccCCHhHHHHHHHHhcC
Confidence            356776  677777777777777777765

>2lvt_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=96.79  E-value=7.8e-06  Score=47.76  Aligned_cols=26  Identities=27%  Similarity=0.618  Sum_probs=18.0

Q ss_pred             ccccccchhhcCCHHHHHHHHhhccC
Q psy8169          17 NHMCELCYKVFESRENLMRHLKIHDD   42 (843)
Q Consensus        17 ~~~C~~C~~~f~~~~~l~~H~~~h~~   42 (843)
                      +|.|++|++.|.....|..|+++|++
T Consensus         2 ~~~C~~C~k~f~~~~~l~~H~~~H~~   27 (29)
T 2lvt_A            2 PCQCVMCGKAFTQASSLIAHVRQHTG   27 (29)
Confidence            56677777777777777777766654

>1va1_A Transcription factor SP1; C2H2 type zinc finger, DNA-binding protein; NMR {Homo sapiens}

Probab=97.62  E-value=3.2e-05  Score=48.23  Aligned_cols=31  Identities=23%  Similarity=0.490  Sum_probs=21.6

Q ss_pred             hcCCCceeccc--cchhcCChhhHHHHHHHccC
Q psy8169         298 HMDDNQIQCRF--CNKYFSRNYNLKQHMKTCTK  328 (843)
Q Consensus       298 H~~~~~~~C~~--C~~~f~~~~~L~~H~~~h~~  328 (843)
                      |.++++|.|.+  |++.|.....|..|+++|++
T Consensus         3 ~~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~   35 (37)
T 1va1_A            3 PGKKKQHICHIQGCGKVYGKTSHLRAHLRWHTG   35 (37)
T ss_dssp             SSSCCCEECCSTTCCCEESCHHHHHHHHHHHHT
T ss_pred             CCCCCCCCCCCCCCCCccCCHHHHHHHHHhcCC
Confidence            55667777764  77777777777777777654

>2lvr_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, classical zinc finger, transcription; NMR {Homo sapiens}

Probab=96.77  E-value=8.4e-06  Score=48.07  Aligned_cols=27  Identities=30%  Similarity=0.635  Sum_probs=18.2

Q ss_pred             CccccccchhhcCCHHHHHHHHhhccC
Q psy8169          16 ENHMCELCYKVFESRENLMRHLKIHDD   42 (843)
Q Consensus        16 ~~~~C~~C~~~f~~~~~l~~H~~~h~~   42 (843)
                      ++|.|++|++.|.+...|..|+++|++
T Consensus         2 k~~~C~~C~k~f~~~~~l~~H~~~h~~   28 (30)
T 2lvr_A            2 KPYVCIHCQRQFADPGALQRHVRIHTG   28 (30)
Confidence            466677777777777777777666654

>1zfd_A SWI5; DNA binding motif, zinc finger DNA binding domain; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=97.60  E-value=2.8e-05  Score=46.56  Aligned_cols=27  Identities=33%  Similarity=0.637  Sum_probs=17.2

Q ss_pred             Cccccc--cchhhcCCHHHHHHHHhhccC
Q psy8169          16 ENHMCE--LCYKVFESRENLMRHLKIHDD   42 (843)
Q Consensus        16 ~~~~C~--~C~~~f~~~~~l~~H~~~h~~   42 (843)
                      ++|.|+  .|++.|.+...|..|+++|++
T Consensus         2 k~~~C~~~~C~k~f~~~~~L~~H~~~H~~   30 (32)
T 1zfd_A            2 RPYSCDHPGCDKAFVRNHDLIRHKKSHQE   30 (32)
T ss_dssp             CSBCCCCTTCCCCBSSSHHHHHHHGGGTC
T ss_pred             CCCcCcCCCCCCccCCHHHHHHHHHHccC
Confidence            456666  566666666666666666654

>1sp2_A SP1F2; zinc finger, transcription activation; NMR {Homo sapiens} SCOP: g.37.1.1 PDB: 1va2_A

Probab=97.58  E-value=3.8e-05  Score=45.53  Aligned_cols=27  Identities=37%  Similarity=0.680  Sum_probs=16.7

Q ss_pred             ccccc--cccccccCHHHHHHHHhhcCCC
Q psy8169         154 KFECY--VCSKVLATSHSLKRHLLIHNGP  180 (843)
Q Consensus       154 ~~~C~--~C~~~f~~~~~l~~H~~~h~~~  180 (843)
                      +|.|.  .|++.|.....|..|+++|.++
T Consensus         2 p~~C~~~~C~k~f~~~~~L~~H~~~H~~~   30 (31)
T 1sp2_A            2 PFMCTWSYCGKRFTRSDELQRHKRTHTGE   30 (31)
T ss_dssp             CCBCCSTTCCCBCSSHHHHHHHHTTTSCC
T ss_pred             CcCCcCCCCCcccCCHhHHHHHHHHhcCC
Confidence            45665  6666666666666666666553

>2m0e_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=97.58  E-value=1.8e-05  Score=46.11  Aligned_cols=26  Identities=46%  Similarity=0.705  Sum_probs=16.5

Q ss_pred             ccccccchhhcCCHHHHHHHHhhccC
Q psy8169          17 NHMCELCYKVFESRENLMRHLKIHDD   42 (843)
Q Consensus        17 ~~~C~~C~~~f~~~~~l~~H~~~h~~   42 (843)
                      +|.|+.|++.|.....|..|+++|++
T Consensus         2 ~~~C~~C~~~f~~~~~l~~H~~~h~~   27 (29)
T 2m0e_A            2 EHKCPHCDKKFNQVGNLKAHLKIHIA   27 (29)
T ss_dssp             CCCCSSCCCCCCTTTHHHHHHHHHHS
T ss_pred             CCcCCCCCcccCCHHHHHHHHHHhcc
Confidence            56666666666666666666666654

>2m0f_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=97.56  E-value=2.7e-05  Score=45.30  Aligned_cols=26  Identities=50%  Similarity=0.871  Sum_probs=15.3

Q ss_pred             ccccccccccccCHHHHHHHHhhcCC
Q psy8169         154 KFECYVCSKVLATSHSLKRHLLIHNG  179 (843)
Q Consensus       154 ~~~C~~C~~~f~~~~~l~~H~~~h~~  179 (843)
                      +|.|..|++.|.+...|..|+++|.+
T Consensus         2 ~~~C~~C~k~f~~~~~l~~H~~~H~~   27 (29)
T 2m0f_A            2 PLKCRECGKQFTTSGNLKRHLRIHSG   27 (29)
T ss_dssp             CEECTTTSCEESCHHHHHHHHHHHHT
T ss_pred             CccCCCCCCccCChhHHHHHHHHhcC
Confidence            45566666666666666666655554

>1klr_A Zinc finger Y-chromosomal protein; transcription; NMR {Synthetic} SCOP: g.37.1.1 PDB: 5znf_A 1kls_A 1xrz_A* 7znf_A

Probab=97.56  E-value=3.1e-05  Score=45.48  Aligned_cols=26  Identities=23%  Similarity=0.396  Sum_probs=17.5

Q ss_pred             ccccccchhhcCCHHHHHHHHhhccC
Q psy8169          17 NHMCELCYKVFESRENLMRHLKIHDD   42 (843)
Q Consensus        17 ~~~C~~C~~~f~~~~~l~~H~~~h~~   42 (843)
                      +|.|++|++.|.....|..|+++|++
T Consensus         2 ~~~C~~C~k~f~~~~~l~~H~~~h~~   27 (30)
T 1klr_A            2 TYQCQYCEFRSADSSNLKTHIKTKHS   27 (30)
T ss_dssp             CCCCSSSSCCCSCSHHHHHHHHHHTS
T ss_pred             CccCCCCCCccCCHHHHHHHHHHHcc
Confidence            56666677666666666666666665

>1ncs_A Peptide M30F, transcriptional factor SWI5; DNA binding motif, transcription regulation, zinc-finger; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=97.55  E-value=9.7e-06  Score=54.03  Aligned_cols=39  Identities=15%  Similarity=0.320  Sum_probs=32.7

Q ss_pred             hhhhhhhccccCCCCCCccchhhccccccccccccccccc--chhhhhhhHHHHhhhhhhhcC
Q psy8169         677 SLKKHIRIFHTQNQPQHTNVIEVALGARANAAFIDRIRCE--LCDKSFTRKDSLKKHNRIFHG  737 (843)
Q Consensus       677 ~L~~H~~~~H~~~~p~~~~~~~~~~~~~~~~~~~~~~~C~--~C~~~f~~~~~L~~H~~~~H~  737 (843)
                      .+..|+.. |.+++|                     |+|+  .|+++|..++.|..|++.|.+
T Consensus         5 ~~~~~~~~-H~~~k~---------------------~~C~~~~C~k~F~~~~~L~~H~~~H~~   45 (47)
T 1ncs_A            5 GSIDKYVK-EMPDKT---------------------FECLFPGCTKTFKRRYNIRSHIQTHLE   45 (47)
T ss_dssp             SSGGGSCE-EETTTE---------------------EECCCTTCCCEECSSSSHHHHHHHHTT
T ss_pred             HHHHHHhc-cCCCCC---------------------eECCCCCCCCccCCHHHHHHHHHHccC
Confidence            44555555 999998                     9996  699999999999999999665

>1paa_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=97.55  E-value=3.3e-05  Score=45.37  Aligned_cols=26  Identities=42%  Similarity=0.832  Sum_probs=14.1

Q ss_pred             ccccccchhhcCCHHHHHHH-HhhccC
Q psy8169          17 NHMCELCYKVFESRENLMRH-LKIHDD   42 (843)
Q Consensus        17 ~~~C~~C~~~f~~~~~l~~H-~~~h~~   42 (843)
                      +|.|+.|++.|.+...|..| +++|.+
T Consensus         2 ~~~C~~C~k~f~~~~~l~~H~~~~H~~   28 (30)
T 1paa_A            2 AYACGLCNRAFTRRDLLIRHAQKIHSG   28 (30)
T ss_dssp             CSBCTTTCCBCSSSHHHHHHHTTTSCC
T ss_pred             CcCCcccCcccCChHHHHHHHHHHccC
Confidence            45555555555555555555 345543

>2lvt_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=96.69  E-value=1.2e-05  Score=47.00  Aligned_cols=26  Identities=31%  Similarity=0.658  Sum_probs=13.8

Q ss_pred             ccccccccccccCHHHHHHHHhhcCC
Q psy8169         154 KFECYVCSKVLATSHSLKRHLLIHNG  179 (843)
Q Consensus       154 ~~~C~~C~~~f~~~~~l~~H~~~h~~  179 (843)
                      +|.|..|++.|.....|..|+++|.+
T Consensus         2 ~~~C~~C~k~f~~~~~l~~H~~~H~~   27 (29)
T 2lvt_A            2 PCQCVMCGKAFTQASSLIAHVRQHTG   27 (29)
Confidence            45555555555555555555555544

>1zfd_A SWI5; DNA binding motif, zinc finger DNA binding domain; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=97.52  E-value=5e-05  Score=45.44  Aligned_cols=28  Identities=29%  Similarity=0.535  Sum_probs=17.4

Q ss_pred             cccccc--cccccccCHHHHHHHHhhcCCC
Q psy8169         153 MKFECY--VCSKVLATSHSLKRHLLIHNGP  180 (843)
Q Consensus       153 ~~~~C~--~C~~~f~~~~~l~~H~~~h~~~  180 (843)
                      ++|.|.  .|++.|.....|..|+++|.++
T Consensus         2 k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~   31 (32)
T 1zfd_A            2 RPYSCDHPGCDKAFVRNHDLIRHKKSHQEK   31 (32)
T ss_dssp             CSBCCCCTTCCCCBSSSHHHHHHHGGGTCC
T ss_pred             CCCcCcCCCCCCccCCHHHHHHHHHHccCC
Confidence            356666  5666666666666666666553

>2m0e_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=97.52  E-value=2.6e-05  Score=45.39  Aligned_cols=27  Identities=33%  Similarity=0.506  Sum_probs=24.5

Q ss_pred             chhhchhhhhhhhhhhHHHHHhHhhcc
Q psy8169         774 EILCKICNRTFTRNYNLKKHMKTVHKI  800 (843)
Q Consensus       774 ~~~C~~C~~~F~~~~~L~~H~~~~H~~  800 (843)
                      +|.|..||+.|...+.|..|++++++.
T Consensus         2 ~~~C~~C~~~f~~~~~l~~H~~~h~~~   28 (29)
T 2m0e_A            2 EHKCPHCDKKFNQVGNLKAHLKIHIAD   28 (29)
T ss_dssp             CCCCSSCCCCCCTTTHHHHHHHHHHSC
T ss_pred             CCcCCCCCcccCCHHHHHHHHHHhccC
Confidence            389999999999999999999988763

>1klr_A Zinc finger Y-chromosomal protein; transcription; NMR {Synthetic} SCOP: g.37.1.1 PDB: 5znf_A 1kls_A 1xrz_A* 7znf_A

Probab=97.48  E-value=4.4e-05  Score=44.78  Aligned_cols=27  Identities=22%  Similarity=0.528  Sum_probs=24.4

Q ss_pred             CCCccccccccchhhhhhhhhccccCCC
Q psy8169         663 IPCTLCDKTFTRKDSLKKHIRIFHTQNQ  690 (843)
Q Consensus       663 ~~C~~C~~~f~~~~~L~~H~~~~H~~~~  690 (843)
                      |.|+.|++.|.....|..|++. |.+++
T Consensus         3 ~~C~~C~k~f~~~~~l~~H~~~-h~~~~   29 (30)
T 1klr_A            3 YQCQYCEFRSADSSNLKTHIKT-KHSKE   29 (30)
T ss_dssp             CCCSSSSCCCSCSHHHHHHHHH-HTSSC
T ss_pred             ccCCCCCCccCCHHHHHHHHHH-HccCC
Confidence            9999999999999999999998 66554

>2lvr_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, classical zinc finger, transcription; NMR {Homo sapiens}

Probab=96.60  E-value=1.7e-05  Score=46.74  Aligned_cols=26  Identities=35%  Similarity=0.791  Sum_probs=14.3

Q ss_pred             ccccccccccccCHHHHHHHHhhcCC
Q psy8169         154 KFECYVCSKVLATSHSLKRHLLIHNG  179 (843)
Q Consensus       154 ~~~C~~C~~~f~~~~~l~~H~~~h~~  179 (843)
                      +|.|..|++.|.+...|..|+++|.+
T Consensus         3 ~~~C~~C~k~f~~~~~l~~H~~~h~~   28 (30)
T 2lvr_A            3 PYVCIHCQRQFADPGALQRHVRIHTG   28 (30)
Confidence            45555555555555555555555544

>1paa_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=97.42  E-value=6.8e-05  Score=43.97  Aligned_cols=27  Identities=44%  Similarity=0.920  Sum_probs=23.9

Q ss_pred             CCCccccccccchhhhhhh-hhccccCCC
Q psy8169         663 IPCTLCDKTFTRKDSLKKH-IRIFHTQNQ  690 (843)
Q Consensus       663 ~~C~~C~~~f~~~~~L~~H-~~~~H~~~~  690 (843)
                      |.|+.|++.|.+...|..| ++. |.+++
T Consensus         3 ~~C~~C~k~f~~~~~l~~H~~~~-H~~~~   30 (30)
T 1paa_A            3 YACGLCNRAFTRRDLLIRHAQKI-HSGNL   30 (30)
T ss_dssp             SBCTTTCCBCSSSHHHHHHHTTT-SCCCC
T ss_pred             cCCcccCcccCChHHHHHHHHHH-ccCCC
Confidence            9999999999999999999 566 87753

>2ab3_A ZNF29; zinc finger protein, beta BETA alpha, RREIIB-TR, RNA binding protein; NMR {Escherichia coli} SCOP: k.12.1.1 PDB: 2ab7_A

Probab=97.40  E-value=7.2e-05  Score=43.42  Aligned_cols=25  Identities=40%  Similarity=0.709  Sum_probs=16.6

Q ss_pred             ccccc--cchhhcCCHHHHHHHHhhcc
Q psy8169          17 NHMCE--LCYKVFESRENLMRHLKIHD   41 (843)
Q Consensus        17 ~~~C~--~C~~~f~~~~~l~~H~~~h~   41 (843)
                      +|.|+  .|++.|.+.+.|..|+++|+
T Consensus         2 ~~~C~~~~C~k~f~~~~~l~~H~~~H~   28 (29)
T 2ab3_A            2 VYVCHFENCGRSFNDRRKLNRHKKIHT   28 (29)
T ss_dssp             CEEECSTTTCEEESSHHHHHHHHGGGT
T ss_pred             CCCCcCCcCcCccCCHHHHHHHHHHhC
Confidence            56666  66666666666666666664

>1zw8_A Zinc-responsive transcriptional regulator ZAP1; interacting C2H2 zinc fingers, beta-BETA-alpha, solution structure; NMR {Saccharomyces cerevisiae}

Probab=97.26  E-value=0.00011  Score=52.18  Aligned_cols=59  Identities=19%  Similarity=0.334  Sum_probs=46.8

Q ss_pred             CCCcc--ccccccchhhhhhhhhccccCCCCCCccchhhccccccccccccccccc--chhhhhhhHHHHhhhhhhhc
Q psy8169         663 IPCTL--CDKTFTRKDSLKKHIRIFHTQNQPQHTNVIEVALGARANAAFIDRIRCE--LCDKSFTRKDSLKKHNRIFH  736 (843)
Q Consensus       663 ~~C~~--C~~~f~~~~~L~~H~~~~H~~~~p~~~~~~~~~~~~~~~~~~~~~~~C~--~C~~~f~~~~~L~~H~~~~H  736 (843)
                      |.|..  |++.|.+...|..|+...|.+.++.               .....|.|.  -|++.+.....|..|++..|
T Consensus         2 l~C~W~~C~~~f~~~~~l~~Hv~~~Hv~~~~~---------------~~~~~~~C~W~~C~~~~~~~~~L~~Hir~~H   64 (64)
T 1zw8_A            2 LKCKWKECPESASSLFDLQRHLLKDHVSQDFK---------------HPMEPLACNWEDCDFLGDDTASIVNHINAQH   64 (64)
T ss_dssp             CCCCCTTCCCCCSSHHHHHHHHHHHSCCCCCC---------------CSSCCEECCCSSCCCEESSHHHHHHHHHHHC
T ss_pred             CeEeeCCCCCcCCCHHHHHHHHHhhccCcccC---------------CCCCCCEeeCCCCcCCCCChHHHHhhccccC
Confidence            56766  9999999999999996559876620               001239998  59999999999999999876

>2ab3_A ZNF29; zinc finger protein, beta BETA alpha, RREIIB-TR, RNA binding protein; NMR {Escherichia coli} SCOP: k.12.1.1 PDB: 2ab7_A

Probab=97.22  E-value=0.00016  Score=41.82  Aligned_cols=25  Identities=28%  Similarity=0.616  Sum_probs=15.6

Q ss_pred             ccccc--cccccccCHHHHHHHHhhcC
Q psy8169         154 KFECY--VCSKVLATSHSLKRHLLIHN  178 (843)
Q Consensus       154 ~~~C~--~C~~~f~~~~~l~~H~~~h~  178 (843)
                      +|.|.  .|++.|.....|..|+++|.
T Consensus         2 ~~~C~~~~C~k~f~~~~~l~~H~~~H~   28 (29)
T 2ab3_A            2 VYVCHFENCGRSFNDRRKLNRHKKIHT   28 (29)
T ss_dssp             CEEECSTTTCEEESSHHHHHHHHGGGT
T ss_pred             CCCCcCCcCcCccCCHHHHHHHHHHhC
Confidence            45666  66666666666666666654

>1zw8_A Zinc-responsive transcriptional regulator ZAP1; interacting C2H2 zinc fingers, beta-BETA-alpha, solution structure; NMR {Saccharomyces cerevisiae}

Probab=97.13  E-value=0.00059  Score=48.34  Aligned_cols=53  Identities=23%  Similarity=0.408  Sum_probs=37.5

Q ss_pred             ccCCc--chhccCChhHHHHhHhhhcCCCC-----cccccc--cccccccCHHHHHHHHhhc
Q psy8169         125 HECDL--CGKNFSQRNNLKRHLEEVHRTDG-----MKFECY--VCSKVLATSHSLKRHLLIH  177 (843)
Q Consensus       125 ~~C~~--C~~~f~~~~~l~~H~~~~h~~~~-----~~~~C~--~C~~~f~~~~~l~~H~~~h  177 (843)
                      |.|..  |++.|.+...|..|+...|-...     .+|.|.  .|++.+.....|..|++..
T Consensus         2 l~C~W~~C~~~f~~~~~l~~Hv~~~Hv~~~~~~~~~~~~C~W~~C~~~~~~~~~L~~Hir~~   63 (64)
T 1zw8_A            2 LKCKWKECPESASSLFDLQRHLLKDHVSQDFKHPMEPLACNWEDCDFLGDDTASIVNHINAQ   63 (64)
T ss_dssp             CCCCCTTCCCCCSSHHHHHHHHHHHSCCCCCCCSSCCEECCCSSCCCEESSHHHHHHHHHHH
T ss_pred             CeEeeCCCCCcCCCHHHHHHHHHhhccCcccCCCCCCCEeeCCCCcCCCCChHHHHhhcccc
Confidence            45654  88888888888888865562221     267785  6888888888888887754

>1zu1_A DSRBP-ZFA, RNA binding protein ZFA; zinc finger protein, helix-loop-helix, helix-turn-helix; NMR {Xenopus laevis} SCOP: g.37.1.4 g.37.1.4

Probab=96.06  E-value=0.0059  Score=50.44  Aligned_cols=78  Identities=19%  Similarity=0.382  Sum_probs=54.5

Q ss_pred             CCccccccchhhcCCHHHHHHHH--hhccCCCCCccccccc------ccccCCHHHHHHhHHhhccCCCceeCCCCCCcc
Q psy8169          15 VENHMCELCYKVFESRENLMRHL--KIHDDKESKRFKCEQC------DKRFSSNAELNKHSSAIHQRLKLHECDLCGKNF   86 (843)
Q Consensus        15 ~~~~~C~~C~~~f~~~~~l~~H~--~~h~~~~~~~~~C~~C------~~~f~~~~~l~~H~~~~h~~~~~~~C~~C~~~f   86 (843)
                      .+++.|.+|+.+|.+.+.+..|.  +.|... .+.+.+..+      ++.+...    .+. ..+.+.+.|.|..|+..|
T Consensus        30 ~~~~~C~~C~v~~~S~s~~~~H~~gkkH~~~-v~~~~~~~~~~~~~~~~~~~~~----~~~-~~~~~~~~~~C~~C~~~f  103 (127)
T 1zu1_A           30 FSDTQCKVCSAVLISESQKLAHYQSRKHANK-VRRYMAINQGEDSVPAKKFKAA----PAE-ISDGEDRSKCCPVCNMTF  103 (127)
T ss_dssp             BCSSEETTTTEECCSHHHHHHHHHCHHHHHH-HHHHHHHTTCCCCCSCCCCSCC----SSC-CSSCCCTTTEETTTTEEC
T ss_pred             CCCCcCcCCCCEeCCHHHHHHHHCcHHHHHH-HHHHhcccCcccCCCCCccCCC----ccc-cccCCCCCeEcCCCCCEe
Confidence            56799999999999999999999  667532 233444211      1222211    121 234566788999999999


Q ss_pred             cchhhHHhhhcC
Q psy8169          87 SQRNNLKRQANG   98 (843)
Q Consensus        87 ~~~~~l~~H~~~   98 (843)
                      .+...+..|+.+
T Consensus       104 ~s~~~~~~H~~g  115 (127)
T 1zu1_A          104 SSPVVAESHYIG  115 (127)
T ss_dssp             SSHHHHHHHHTS
T ss_pred             CCHHHHHHHHCC
Confidence            999999999986

>1zu1_A DSRBP-ZFA, RNA binding protein ZFA; zinc finger protein, helix-loop-helix, helix-turn-helix; NMR {Xenopus laevis} SCOP: g.37.1.4 g.37.1.4

Probab=95.78  E-value=0.0067  Score=50.09  Aligned_cols=24  Identities=17%  Similarity=0.357  Sum_probs=13.5

Q ss_pred             CcccccccccccccCHHHHHHHHh
Q psy8169         152 GMKFECYVCSKVLATSHSLKRHLL  175 (843)
Q Consensus       152 ~~~~~C~~C~~~f~~~~~l~~H~~  175 (843)
                      ...|.|.+|+..|.+...|..|+.
T Consensus        91 ~~~~~C~~C~~~f~s~~~~~~H~~  114 (127)
T 1zu1_A           91 DRSKCCPVCNMTFSSPVVAESHYI  114 (127)
T ss_dssp             CTTTEETTTTEECSSHHHHHHHHT
T ss_pred             CCCeEcCCCCCEeCCHHHHHHHHC
Confidence            344556666666666666655553

>2e72_A POGO transposable element with ZNF domain; zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=95.34  E-value=0.0073  Score=37.67  Aligned_cols=27  Identities=26%  Similarity=0.449  Sum_probs=23.4

Q ss_pred             cchhhchhhhhhhhhhhHHHHHhHhhc
Q psy8169         773 NEILCKICNRTFTRNYNLKKHMKTVHK  799 (843)
Q Consensus       773 ~~~~C~~C~~~F~~~~~L~~H~~~~H~  799 (843)
                      ..|.|+.|+..|+....|+.||+.-=+
T Consensus        11 ~~~~CPrCn~~f~~~~sLr~HmkycCp   37 (49)
T 2e72_A           11 GRKICPRCNAQFRVTEALRGHMCYCCP   37 (49)
T ss_dssp             SCCCCTTTCCCCSSHHHHHHHHHHHCT
T ss_pred             CceeCCcccccccchHHHHhhhhhcCc
Confidence            348999999999999999999985544

>1zr9_A Zinc finger protein 593; DNA binding, structural genomics, PSI, protein structure initiative, center for eukaryotic structural genomics, CESG; NMR {Homo sapiens} SCOP: g.37.1.4

Probab=95.24  E-value=0.0052  Score=49.31  Aligned_cols=30  Identities=17%  Similarity=0.284  Sum_probs=19.5

Q ss_pred             HhhccCCCCCcccccccccccCCHHHHHHhHH
Q psy8169          37 LKIHDDKESKRFKCEQCDKRFSSNAELNKHSS   68 (843)
Q Consensus        37 ~~~h~~~~~~~~~C~~C~~~f~~~~~l~~H~~   68 (843)
                      ...|+|  .++|.|..|++.|.+...|..|++
T Consensus        42 ded~tG--ekpfyC~~C~K~F~~~~~L~~H~r   71 (124)
T 1zr9_A           42 DPDLPG--GGLHRCLACARYFIDSTNLKTHFR   71 (124)
T ss_dssp             CSSSGG--GGCSEETTTTEECSSHHHHHHHTT
T ss_pred             cccCCC--CcceEcccCcchhCCHHHHHHHHh
Confidence            345665  467777777777777777777753

>2e72_A POGO transposable element with ZNF domain; zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=94.96  E-value=0.017  Score=36.10  Aligned_cols=23  Identities=26%  Similarity=0.528  Sum_probs=14.8

Q ss_pred             CccccccchhhcCCHHHHHHHHh
Q psy8169          16 ENHMCELCYKVFESRENLMRHLK   38 (843)
Q Consensus        16 ~~~~C~~C~~~f~~~~~l~~H~~   38 (843)
                      .+|.|+.|+..|.....|+.||+
T Consensus        11 ~~~~CPrCn~~f~~~~sLr~Hmk   33 (49)
T 2e72_A           11 GRKICPRCNAQFRVTEALRGHMC   33 (49)
T ss_dssp             SCCCCTTTCCCCSSHHHHHHHHH
T ss_pred             CceeCCcccccccchHHHHhhhh
Confidence            45666666666666666666665

>1zr9_A Zinc finger protein 593; DNA binding, structural genomics, PSI, protein structure initiative, center for eukaryotic structural genomics, CESG; NMR {Homo sapiens} SCOP: g.37.1.4

Probab=94.64  E-value=0.0062  Score=48.86  Aligned_cols=23  Identities=35%  Similarity=0.564  Sum_probs=21.5

Q ss_pred             ccccchhhhhhhHHHHhhhhhhh
Q psy8169         713 IRCELCDKSFTRKDSLKKHNRIF  735 (843)
Q Consensus       713 ~~C~~C~~~f~~~~~L~~H~~~~  735 (843)
                      |.|..|+++|.+...|..|++..
T Consensus        51 fyC~~C~K~F~~~~~L~~H~rsK   73 (124)
T 1zr9_A           51 HRCLACARYFIDSTNLKTHFRSK   73 (124)
T ss_dssp             SEETTTTEECSSHHHHHHHTTCH
T ss_pred             eEcccCcchhCCHHHHHHHHhhh
Confidence            99999999999999999998764

>3mjh_B Early endosome antigen 1; protein-zinc finger complex, beta BETA alpha fold, beta HAIR RAB5A GTPase, EEA1, protein transport; HET: GTP; 2.03A {Homo sapiens}

Probab=94.07  E-value=0.022  Score=33.38  Aligned_cols=28  Identities=25%  Similarity=0.533  Sum_probs=25.7

Q ss_pred             chhhchhhhhhhhhhhHHHHHhHhhccC
Q psy8169         774 EILCKICNRTFTRNYNLKKHMKTVHKID  801 (843)
Q Consensus       774 ~~~C~~C~~~F~~~~~L~~H~~~~H~~~  801 (843)
                      .|.|++|-+.|.+...|..|....|..+
T Consensus         5 GFiCP~C~~~l~s~~~L~~Hye~~H~~~   32 (34)
T 3mjh_B            5 GFICPQCMKSLGSADELFKHYEAVHDAG   32 (34)
T ss_dssp             EEECTTTCCEESSHHHHHHHHHHHTSSS
T ss_pred             ccCCcHHHHHcCCHHHHHHHHHhccccC
Confidence            3999999999999999999999999753

>3mjh_B Early endosome antigen 1; protein-zinc finger complex, beta BETA alpha fold, beta HAIR RAB5A GTPase, EEA1, protein transport; HET: GTP; 2.03A {Homo sapiens}

Probab=93.70  E-value=0.045  Score=32.06  Aligned_cols=27  Identities=30%  Similarity=0.545  Sum_probs=24.9

Q ss_pred             ceecccccccccChHHHHHHHHhhccC
Q psy8169         446 IIQCHICLKTFAKKDSLKKHMKVFHTY  472 (843)
Q Consensus       446 ~~~C~~C~~~f~~~~~L~~H~~~~H~~  472 (843)
                      .|.|++|.+.|.+...|..|....|..
T Consensus         5 GFiCP~C~~~l~s~~~L~~Hye~~H~~   31 (34)
T 3mjh_B            5 GFICPQCMKSLGSADELFKHYEAVHDA   31 (34)
T ss_dssp             EEECTTTCCEESSHHHHHHHHHHHTSS
T ss_pred             ccCCcHHHHHcCCHHHHHHHHHhcccc
Confidence            499999999999999999999998863

>3hcs_A TNF receptor-associated factor 6; cross-brace, beta-BETA-alpha, coiled coil, cytoplasm, metal- binding, UBL conjugation, UBL conjugation pathway; 2.20A {Homo sapiens}

Probab=92.14  E-value=0.064  Score=47.38  Aligned_cols=55  Identities=16%  Similarity=0.431  Sum_probs=42.6

Q ss_pred             eeecCcChhccCChHHHHHHHHHhcCCCceeccccchhcCChhhHHHHHHHccCCCC
Q psy8169         275 YLTCLICFKTFLTEVDLGKHMKMHMDDNQIQCRFCNKYFSRNYNLKQHMKTCTKNVS  331 (843)
Q Consensus       275 ~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~  331 (843)
                      ++.|+.|+..+ ....|..|+...-..+...|+.|+..+. ...|..|..++.++.+
T Consensus       110 ~v~C~~C~~~~-~r~~l~~H~~~~C~~r~~~C~~C~~~~~-~~~l~~H~~~~~~~~~  164 (170)
T 3hcs_A          110 LMDCPQCQRPF-QKFHINIHILKDCPRRQVSCDNCAASMA-FEDKEIHDQNCPLALE  164 (170)
T ss_dssp             EEECTTTCCEE-EGGGHHHHHHHTCTTCEEECTTTCCEEE-GGGHHHHHTTCCC---
T ss_pred             eeECCCCChHH-HHHHHHHHhhhhCCCCCeECCCCCCccC-HHHHHhHHHhCcChhh
Confidence            57788898877 6778899998888888889999988775 4678899888776544

>2elu_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2elw_A

Probab=87.63  E-value=0.44  Score=26.61  Aligned_cols=26  Identities=27%  Similarity=0.584  Sum_probs=23.4

Q ss_pred             eecccccccccChHHHHHHHHhhccC
Q psy8169         447 IQCHICLKTFAKKDSLKKHMKVFHTY  472 (843)
Q Consensus       447 ~~C~~C~~~f~~~~~L~~H~~~~H~~  472 (843)
                      -.|.+|.+.|....+|..|++..|..
T Consensus        10 qhcrfckkkysdvknlikhire~hd~   35 (37)
T 2elu_A           10 QHCRFCKKKYSDVKNLIKHIRDAHDP   35 (37)
T ss_dssp             CEETTTTEECSSHHHHHHHHHHTTCC
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence            57999999999999999999987753

>3hcs_A TNF receptor-associated factor 6; cross-brace, beta-BETA-alpha, coiled coil, cytoplasm, metal- binding, UBL conjugation, UBL conjugation pathway; 2.20A {Homo sapiens}

Probab=87.18  E-value=0.16  Score=44.78  Aligned_cols=95  Identities=18%  Similarity=0.356  Sum_probs=54.4

Q ss_pred             cCCcchhccCChh-----HHHHhHhhhcCCCCccccc--ccccccccCHHHHHHHHhhcCCCcccccchhHhhcCHHHHH
Q psy8169         126 ECDLCGKNFSQRN-----NLKRHLEEVHRTDGMKFEC--YVCSKVLATSHSLKRHLLIHNGPKYTCEICAKEFTRVYELN  198 (843)
Q Consensus       126 ~C~~C~~~f~~~~-----~l~~H~~~~h~~~~~~~~C--~~C~~~f~~~~~l~~H~~~h~~~~~~C~~C~~~f~~~~~L~  198 (843)
                      .|+.|...+....     .+.+-+.      .....|  ..|+..+. ...|..|+..-.-.+..|+.|+..+ ....|.
T Consensus        55 ~CP~Cr~~~~~~~~~~~~~~~~~i~------~l~v~C~n~GC~~~~~-~~~l~~H~~~C~~~~v~C~~C~~~~-~r~~l~  126 (170)
T 3hcs_A           55 KCPVDNEILLENQLFPDNFAKREIL------SLMVKCPNEGCLHKME-LRHLEDHQAHCEFALMDCPQCQRPF-QKFHIN  126 (170)
T ss_dssp             BCTTTCCBCCGGGCEECHHHHHHHH------TSEEECCSTTCCCEEE-GGGHHHHHTTCTTSEEECTTTCCEE-EGGGHH
T ss_pred             CCCCCccCcchhhhhhhHHHHHHHh------hcccCCCCCCCCceec-HhHHHHHHhcCCceeeECCCCChHH-HHHHHH
Confidence            6888876665431     1222221      234566  45666553 4556677654333456777777666 455677


Q ss_pred             HHHhhccCccccCccccCcccccccchhhHHHhh
Q psy8169         199 IHKKLHEDESVANQLKCEFCGKVFLKKSNLKAHI  232 (843)
Q Consensus       199 ~H~~~h~~~~~~~~~~C~~C~~~f~~~~~l~~H~  232 (843)
                      .|+...-..   +...|+.|+..+. ...|..|.
T Consensus       127 ~H~~~~C~~---r~~~C~~C~~~~~-~~~l~~H~  156 (170)
T 3hcs_A          127 IHILKDCPR---RQVSCDNCAASMA-FEDKEIHD  156 (170)
T ss_dssp             HHHHHTCTT---CEEECTTTCCEEE-GGGHHHHH
T ss_pred             HHhhhhCCC---CCeECCCCCCccC-HHHHHhHH
Confidence            777654444   5567777777654 34566775

>2k5c_A Uncharacterized protein PF0385; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; NMR {Pyrococcus furiosus}

Probab=87.12  E-value=0.13  Score=36.31  Aligned_cols=16  Identities=19%  Similarity=0.663  Sum_probs=11.2

Q ss_pred             eeCCCCCCcccchhhH
Q psy8169          77 HECDLCGKNFSQRNNL   92 (843)
Q Consensus        77 ~~C~~C~~~f~~~~~l   92 (843)
                      -+||+||....+..-+
T Consensus         9 ~~~PlCG~~L~W~eLI   24 (95)
T 2k5c_A            9 AKCPICGSPLKWEELI   24 (95)
T ss_dssp             EECSSSCCEECHHHHH
T ss_pred             ccCCcCCCccCHHHHH
Confidence            4788888887765433

>2elu_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2elw_A

Probab=85.81  E-value=0.34  Score=27.04  Aligned_cols=26  Identities=27%  Similarity=0.675  Sum_probs=23.4

Q ss_pred             hhhchhhhhhhhhhhHHHHHhHhhcc
Q psy8169         775 ILCKICNRTFTRNYNLKKHMKTVHKI  800 (843)
Q Consensus       775 ~~C~~C~~~F~~~~~L~~H~~~~H~~  800 (843)
                      -.|.+|.+.+..-.+|..|+|.-|..
T Consensus        10 qhcrfckkkysdvknlikhire~hd~   35 (37)
T 2elu_A           10 QHCRFCKKKYSDVKNLIKHIRDAHDP   35 (37)
T ss_dssp             CEETTTTEECSSHHHHHHHHHHTTCC
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence            35999999999999999999998864

>1fu9_A U-shaped transcriptional cofactor; zinc-finger, beta-hairpin + alpha-helix; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1jn7_A

Probab=82.83  E-value=0.69  Score=27.14  Aligned_cols=24  Identities=21%  Similarity=0.441  Sum_probs=21.3

Q ss_pred             CCCCCccccccccchhhhhhhhhc
Q psy8169         661 DRIPCTLCDKTFTRKDSLKKHIRI  684 (843)
Q Consensus       661 ~~~~C~~C~~~f~~~~~L~~H~~~  684 (843)
                      ..+.|..|+-+|.+...+..|.+.
T Consensus         7 ~~~~C~~C~IsF~~l~ty~aHKk~   30 (36)
T 1fu9_A            7 MKKYCSTCDISFNYVKTYLAHKQF   30 (36)
T ss_dssp             CCSEETTTTEECSSHHHHHHHHHH
T ss_pred             CcCeeccccceehhhHHHhhhhee
Confidence            348899999999999999999863

>1fu9_A U-shaped transcriptional cofactor; zinc-finger, beta-hairpin + alpha-helix; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1jn7_A

Probab=81.63  E-value=1.4  Score=25.94  Aligned_cols=25  Identities=16%  Similarity=0.224  Sum_probs=22.0

Q ss_pred             CCceecccccccccChHHHHHHHHh
Q psy8169         444 NKIIQCHICLKTFAKKDSLKKHMKV  468 (843)
Q Consensus       444 ~~~~~C~~C~~~f~~~~~L~~H~~~  468 (843)
                      ...+.|..|+.+|.+...+..|.+.
T Consensus         6 ~~~~~C~~C~IsF~~l~ty~aHKk~   30 (36)
T 1fu9_A            6 VMKKYCSTCDISFNYVKTYLAHKQF   30 (36)
T ss_dssp             CCCSEETTTTEECSSHHHHHHHHHH
T ss_pred             cCcCeeccccceehhhHHHhhhhee
Confidence            3457899999999999999999874

>2jsp_A Transcriptional regulatory protein ROS; prokaryotic Cys2His2 zinc finger, gene regulation; NMR {Agrobacterium tumefaciens}

Probab=80.65  E-value=0.27  Score=36.14  Aligned_cols=25  Identities=36%  Similarity=0.801  Sum_probs=21.5

Q ss_pred             hhhchhhhhhhhhhhHHHHHhHhhccCC
Q psy8169         775 ILCKICNRTFTRNYNLKKHMKTVHKIDD  802 (843)
Q Consensus       775 ~~C~~C~~~F~~~~~L~~H~~~~H~~~~  802 (843)
                      +.|-.||+.|.   .|++|++++|+..+
T Consensus        22 iiClecGK~fK---~LkRHL~~~hgltp   46 (87)
T 2jsp_A           22 IVCLECGGSFK---SLKRHLTTHHSMTP   46 (87)
T ss_dssp             EECTBTCCEES---BHHHHHHHTTCSCH
T ss_pred             eEecccchhhH---HHHHHHHHccCCCH
Confidence            68999999997   48899999998643

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	843
d2csha1	53	g.37.1.1 (A:8-60) Zinc finger protein 297b {Human	1e-06
d2csha1	53	g.37.1.1 (A:8-60) Zinc finger protein 297b {Human	3e-06
d2csha1	53	g.37.1.1 (A:8-60) Zinc finger protein 297b {Human	6e-05
d2csha1	53	g.37.1.1 (A:8-60) Zinc finger protein 297b {Human	2e-04
d2csha1	53	g.37.1.1 (A:8-60) Zinc finger protein 297b {Human	0.001
d2csha1	53	g.37.1.1 (A:8-60) Zinc finger protein 297b {Human	0.002
d2csha1	53	g.37.1.1 (A:8-60) Zinc finger protein 297b {Human	0.002
d2csha1	53	g.37.1.1 (A:8-60) Zinc finger protein 297b {Human	0.003
d2csha1	53	g.37.1.1 (A:8-60) Zinc finger protein 297b {Human	0.003
d2epsa1	39	g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [	7e-06
d2epsa1	39	g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [	3e-04
d2epsa1	39	g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [	8e-04
d2epsa1	39	g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [	0.001
d2epsa1	39	g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [	0.002
d2epsa1	39	g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [	0.002
d2ct1a2	36	g.37.1.1 (A:8-43) Transcriptional repressor CTCF {	1e-04
d2ct1a2	36	g.37.1.1 (A:8-43) Transcriptional repressor CTCF {	7e-04
d2ct1a2	36	g.37.1.1 (A:8-43) Transcriptional repressor CTCF {	0.001
d2ct1a2	36	g.37.1.1 (A:8-43) Transcriptional repressor CTCF {	0.001
d2ct1a2	36	g.37.1.1 (A:8-43) Transcriptional repressor CTCF {	0.004
d1x6ea1	33	g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (H	5e-04
d1x6ea1	33	g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (H	0.004
d2drpa2	26	g.37.1.1 (A:140-165) Tramtrack protein (two zinc-f	7e-04
d2cota2	38	g.37.1.1 (A:7-44) Zinc finger and SCAN domain-cont	0.001
d1x6ha2	36	g.37.1.1 (A:8-43) Transcriptional repressor CTCF {	0.002
d1x6ha2	36	g.37.1.1 (A:8-43) Transcriptional repressor CTCF {	0.003
d2adra1	29	g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Sac	0.003
d1a1ia2	28	g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus)	0.003

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]} Length = 53

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 43.9 bits (103), Expect = 1e-06
 Identities = 18/55 (32%), Positives = 25/55 (45%), Gaps = 3/55 (5%)

Query: 123 KLHECDLCGKNFSQRNNLKRHLEEVHRTDGMKFECYVCSKVLATSHSLKRHLLIH 177
           KL+ C  CGK+F+ ++   RH+            C VC K     H L  H+ IH
Sbjct: 2   KLYPCQ-CGKSFTHKSQRDRHMSMHLGLRPYG--CGVCGKKFKMKHHLVGHMKIH 53

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]} Length = 53

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 42.7 bits (100), Expect = 3e-06
 Identities = 15/45 (33%), Positives = 21/45 (46%)

Query: 281 CFKTFLTEVDLGKHMKMHMDDNQIQCRFCNKYFSRNYNLKQHMKT 325
           C K+F  +    +HM MH+      C  C K F   ++L  HMK 
Sbjct: 8   CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKI 52

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]} Length = 53

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.3 bits (91), Expect = 6e-05
 Identities = 14/67 (20%), Positives = 20/67 (29%), Gaps = 22/67 (32%)

Query: 668 CDKTFTRKDSLKKHIRIFHTQNQPQHTNVIEVALGARANAAFIDRIRCELCDKSFTRKDS 727
           C K+FT K    +H+ +                              C +C K F  K  
Sbjct: 8   CGKSFTHKSQRDRHMSMHLGLRPYG----------------------CGVCGKKFKMKHH 45

Query: 728 LKKHNRI 734
           L  H +I
Sbjct: 46  LVGHMKI 52

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]} Length = 53

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.7 bits (87), Expect = 2e-04
 Identities = 16/50 (32%), Positives = 21/50 (42%), Gaps = 4/50 (8%)

Query: 182 YTCEICAKEFTRVYELNIHKKLHEDESVANQLKCEFCGKVFLKKSNLKAH 231
           Y C+ C K FT   + + H  +H          C  CGK F  K +L  H
Sbjct: 4   YPCQ-CGKSFTHKSQRDRHMSMHLGL---RPYGCGVCGKKFKMKHHLVGH 49

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]} Length = 53

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 35.8 bits (82), Expect = 0.001
 Identities = 13/49 (26%), Positives = 21/49 (42%), Gaps = 3/49 (6%)

Query: 18 HMCELCYKVFESRENLMRHLKIHDDKESKRFKCEQCDKRFSSNAELNKH 66
          + C+ C K F  +    RH+ +H     + + C  C K+F     L  H
Sbjct: 4  YPCQ-CGKSFTHKSQRDRHMSMHLGL--RPYGCGVCGKKFKMKHHLVGH 49

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]} Length = 53

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 35.0 bits (80), Expect = 0.002
 Identities = 17/70 (24%), Positives = 31/70 (44%), Gaps = 21/70 (30%)

Query: 75  KLHECDLCGKNFSQRNNLKRQANGSNVNNRFSSNAELNKHSSAIHQRLKLHECDLCGKNF 134
           KL+ C  CGK+F+ ++   R  +                    +H  L+ + C +CGK F
Sbjct: 2   KLYPCQ-CGKSFTHKSQRDRHMS--------------------MHLGLRPYGCGVCGKKF 40

Query: 135 SQRNNLKRHL 144
             +++L  H+
Sbjct: 41  KMKHHLVGHM 50

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]} Length = 53

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 35.0 bits (80), Expect = 0.002
 Identities = 17/76 (22%), Positives = 21/76 (27%), Gaps = 31/76 (40%)

Query: 511 CSKTFTRKDSLRKHMRRFHIINDTNVKKEFTEGQINRNMLDVILKESGHEIKSRIPCELC 570
           C K+FT K    +HM     +                                   C +C
Sbjct: 8   CGKSFTHKSQRDRHMSMHLGLR-------------------------------PYGCGVC 36

Query: 571 YKTFTRKDSLRKHMKI 586
            K F  K  L  HMKI
Sbjct: 37  GKKFKMKHHLVGHMKI 52

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]} Length = 53

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 34.7 bits (79), Expect = 0.003
 Identities = 16/51 (31%), Positives = 23/51 (45%), Gaps = 2/51 (3%)

Query: 155 FECYVCSKVLATSHSLKRHLLIHNG-PKYTCEICAKEFTRVYELNIHKKLH 204
           + C  C K         RH+ +H G   Y C +C K+F   + L  H K+H
Sbjct: 4   YPCQ-CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIH 53

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]} Length = 53

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 34.3 bits (78), Expect = 0.003
 Identities = 16/83 (19%), Positives = 23/83 (27%), Gaps = 35/83 (42%)

Query: 714 RCELCDKSFTRKDSLKKHNRIFHGGADPKVMDEQMARGSADFLEVVLNEDGEGEPVSITN 773
            C+ C KSFT K    +H  +  G                                    
Sbjct: 5   PCQ-CGKSFTHKSQRDRHMSMHLGLRPYG------------------------------- 32

Query: 774 EILCKICNRTFTRNYNLKKHMKT 796
              C +C + F   ++L  HMK 
Sbjct: 33  ---CGVCGKKFKMKHHLVGHMKI 52

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]} Length = 39

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 41.5 bits (98), Expect = 7e-06
 Identities = 12/36 (33%), Positives = 18/36 (50%)

Query: 46 KRFKCEQCDKRFSSNAELNKHSSAIHQRLKLHECDL 81
          K + C+ C K FS    LN H   +H   + H+C +
Sbjct: 4  KPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQV 39

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]} Length = 39

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 36.9 bits (86), Expect = 3e-04
 Identities = 14/37 (37%), Positives = 22/37 (59%), Gaps = 1/37 (2%)

Query: 123 KLHECDLCGKNFSQRNNLKRHLEEVHRTDGMKFECYV 159
           K + C  CGK FS+ ++L  H+++VH T     +C V
Sbjct: 4   KPYICQSCGKGFSRPDHLNGHIKQVH-TSERPHKCQV 39

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]} Length = 39

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 35.7 bits (83), Expect = 8e-04
 Identities = 9/23 (39%), Positives = 14/23 (60%)

Query: 507 QCRICSKTFTRKDSLRKHMRRFH 529
            C+ C K F+R D L  H+++ H
Sbjct: 7   ICQSCGKGFSRPDHLNGHIKQVH 29

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]} Length = 39

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 35.4 bits (82), Expect = 0.001
 Identities = 12/27 (44%), Positives = 15/27 (55%)

Query: 665 CTLCDKTFTRKDSLKKHIRIFHTQNQP 691
           C  C K F+R D L  HI+  HT  +P
Sbjct: 8   CQSCGKGFSRPDHLNGHIKQVHTSERP 34

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]} Length = 39

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 34.2 bits (79), Expect = 0.002
 Identities = 10/28 (35%), Positives = 13/28 (46%)

Query: 714 RCELCDKSFTRKDSLKKHNRIFHGGADP 741
            C+ C K F+R D L  H +  H    P
Sbjct: 7   ICQSCGKGFSRPDHLNGHIKQVHTSERP 34

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]} Length = 39

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 34.2 bits (79), Expect = 0.002
 Identities = 12/27 (44%), Positives = 15/27 (55%)

Query: 567 CELCYKTFTRKDSLRKHMKIFHTRRNP 593
           C+ C K F+R D L  H+K  HT   P
Sbjct: 8   CQSCGKGFSRPDHLNGHIKQVHTSERP 34

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.7 bits (88), Expect = 1e-04
 Identities = 10/31 (32%), Positives = 16/31 (51%)

Query: 118 IHQRLKLHECDLCGKNFSQRNNLKRHLEEVH 148
            H   K +EC +C   F+Q   +K H+ + H
Sbjct: 2   THSGEKPYECYICHARFTQSGTMKMHILQKH 32

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 35.7 bits (83), Expect = 7e-04
 Identities = 10/25 (40%), Positives = 15/25 (60%)

Query: 665 CTLCDKTFTRKDSLKKHIRIFHTQN 689
           C +C   FT+  ++K HI   HT+N
Sbjct: 11  CYICHARFTQSGTMKMHILQKHTEN 35

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 35.0 bits (81), Expect = 0.001
 Identities = 7/26 (26%), Positives = 12/26 (46%)

Query: 46 KRFKCEQCDKRFSSNAELNKHSSAIH 71
          K ++C  C  RF+ +  +  H    H
Sbjct: 7  KPYECYICHARFTQSGTMKMHILQKH 32

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 35.0 bits (81), Expect = 0.001
 Identities = 7/23 (30%), Positives = 14/23 (60%)

Query: 507 QCRICSKTFTRKDSLRKHMRRFH 529
           +C IC   FT+  +++ H+ + H
Sbjct: 10  ECYICHARFTQSGTMKMHILQKH 32

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 33.4 bits (77), Expect = 0.004
 Identities = 7/25 (28%), Positives = 11/25 (44%)

Query: 714 RCELCDKSFTRKDSLKKHNRIFHGG 738
            C +C   FT+  ++K H    H  
Sbjct: 10  ECYICHARFTQSGTMKMHILQKHTE 34

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]} Length = 33

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 36.1 bits (84), Expect = 5e-04
 Identities = 11/26 (42%), Positives = 15/26 (57%)

Query: 118 IHQRLKLHECDLCGKNFSQRNNLKRH 143
           IH   K + C  CGK FS+ + L +H
Sbjct: 1   IHSGEKPYGCVECGKAFSRSSILVQH 26

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]} Length = 33

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 33.4 bits (77), Expect = 0.004
 Identities = 14/33 (42%), Positives = 19/33 (57%), Gaps = 1/33 (3%)

Query: 176 IHNGPK-YTCEICAKEFTRVYELNIHKKLHEDE 207
           IH+G K Y C  C K F+R   L  H+++H  E
Sbjct: 1   IHSGEKPYGCVECGKAFSRSSILVQHQRVHTGE 33

>d2drpa2 g.37.1.1 (A:140-165) Tramtrack protein (two zinc-finger peptide) {Drosophila melanogaster [TaxId: 7227]} Length = 26

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Tramtrack protein (two zinc-finger peptide)
species: Drosophila melanogaster [TaxId: 7227]

 Score = 35.4 bits (81), Expect = 7e-04
 Identities = 13/23 (56%), Positives = 17/23 (73%)

Query: 566 PCELCYKTFTRKDSLRKHMKIFH 588
           PC  C+K FTRKD++  H+KI H
Sbjct: 3   PCPFCFKEFTRKDNMTAHVKIIH 25

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]} Length = 38

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 34.8 bits (80), Expect = 0.001
 Identities = 10/36 (27%), Positives = 18/36 (50%)

Query: 292 GKHMKMHMDDNQIQCRFCNKYFSRNYNLKQHMKTCT 327
           G+      +  + +C  C K FS + +L +H +T T
Sbjct: 1   GRSEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHT 36

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 34.3 bits (79), Expect = 0.002
 Identities = 9/26 (34%), Positives = 11/26 (42%)

Query: 118 IHQRLKLHECDLCGKNFSQRNNLKRH 143
            H   K + C  C K F Q+  L  H
Sbjct: 2   THTGEKPYACSHCDKTFRQKQLLDMH 27

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 33.9 bits (78), Expect = 0.003
 Identities = 12/34 (35%), Positives = 17/34 (50%), Gaps = 1/34 (2%)

Query: 176 IHNGPK-YTCEICAKEFTRVYELNIHKKLHEDES 208
            H G K Y C  C K F +   L++H K + D +
Sbjct: 2   THTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPN 35

>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence} Length = 29

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

 Score = 33.8 bits (78), Expect = 0.003
 Identities = 10/23 (43%), Positives = 15/23 (65%), Gaps = 1/23 (4%)

Query: 665 CTLCDKTFTRKDSLKKHIRIFHT 687
           C +C + F R++ LK+H R  HT
Sbjct: 5   CEVCTRAFARQEHLKRHYRS-HT 26

>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]} Length = 28

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 33.7 bits (78), Expect = 0.003
 Identities = 11/23 (47%), Positives = 14/23 (60%), Gaps = 1/23 (4%)

Query: 665 CTLCDKTFTRKDSLKKHIRIFHT 687
           C +C + F+R D L  HIR  HT
Sbjct: 6   CRICMRNFSRSDHLTTHIRT-HT 27

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	843
d2csha1	53	Zinc finger protein 297b {Human (Homo sapiens) [Ta	99.43
d2csha1	53	Zinc finger protein 297b {Human (Homo sapiens) [Ta	99.39
d2epsa1	39	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	99.16
d2cota2	38	Zinc finger and SCAN domain-containing protein 16,	99.08
d1x6ea1	33	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	99.04
d1p7aa_	37	Kruppel-like factor 3, Bklf {Mouse (Mus musculus)	99.02
d1x6ha2	36	Transcriptional repressor CTCF {Human (Homo sapien	99.01
d2epsa1	39	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	99.01
d2ct1a2	36	Transcriptional repressor CTCF {Human (Homo sapien	98.87
d1srka_	35	Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musc	98.86
d1x6ea1	33	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	98.84
d2cota2	38	Zinc finger and SCAN domain-containing protein 16,	98.81
d2ct1a2	36	Transcriptional repressor CTCF {Human (Homo sapien	98.8
d1x6ha2	36	Transcriptional repressor CTCF {Human (Homo sapien	98.79
d1p7aa_	37	Kruppel-like factor 3, Bklf {Mouse (Mus musculus)	98.78
d1a1ia2	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.77
d1srka_	35	Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musc	98.74
d2adra1	29	ADR1 {Synthetic, based on Saccharomyces cerevisiae	98.72
d2adra1	29	ADR1 {Synthetic, based on Saccharomyces cerevisiae	98.71
d1a1ia2	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.7
d2dlka2	36	Zinc finger protein 692, ZNF692 {Human (Homo sapie	98.63
d1sp1a_	29	Transcription factor sp1 {Human (Homo sapiens) [Ta	98.62
d1sp1a_	29	Transcription factor sp1 {Human (Homo sapiens) [Ta	98.62
d2dlka2	36	Zinc finger protein 692, ZNF692 {Human (Homo sapie	98.6
d1x6ea2	26	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	98.59
d2glia3	30	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	98.48
d1ubdc3	30	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.43
d1x6ea2	26	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	98.43
d1ncsa_	47	SWI5 zinc-finger domains {Baker's yeast (Saccharom	98.42
d2glia3	30	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	98.38
d1ncsa_	47	SWI5 zinc-finger domains {Baker's yeast (Saccharom	98.38
d1ubdc3	30	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.32
d1sp2a_	31	Transcription factor sp1 {Human (Homo sapiens) [Ta	98.23
d1sp2a_	31	Transcription factor sp1 {Human (Homo sapiens) [Ta	98.2
d1a1ia1	29	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.19
d1zfda_	32	SWI5 zinc-finger domains {Baker's yeast (Saccharom	98.17
d1a1ia1	29	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.17
d1zfda_	32	SWI5 zinc-finger domains {Baker's yeast (Saccharom	98.09
d2dmda2	26	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	98.06
d1ubdc4	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.03
d2dmda2	26	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	98.0
d1ubdc4	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	97.98
d1a1ia3	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	97.92
d2dmda3	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.79
d2epra1	35	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	97.78
d1a1ia3	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	97.74
d2epqa1	32	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	97.73
d2glia5	29	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	97.73
d2epra1	35	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	97.68
d2dmda3	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.68
d2epqa1	32	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	97.68
d1ubdc2	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	97.58
d1klra_	30	ZFY {Human (Homo sapiens) [TaxId: 9606]}	97.54
d1bboa1	28	Enhancer binding protein {Human (Homo sapiens) [Ta	97.51
d1bboa1	28	Enhancer binding protein {Human (Homo sapiens) [Ta	97.49
d2glia5	29	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	97.48
d2dmda1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.48
d2dmda1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.45
d1klra_	30	ZFY {Human (Homo sapiens) [TaxId: 9606]}	97.44
d1x5wa2	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.35
d2dlqa4	27	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	97.29
d1bboa2	29	Enhancer binding protein {Human (Homo sapiens) [Ta	97.28
d2dlqa4	27	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	97.28
d1ubdc2	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	97.28
d1bboa2	29	Enhancer binding protein {Human (Homo sapiens) [Ta	97.27
d1x5wa2	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.18
d2dlqa3	30	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	97.18
d1znfa_	26	XFIN, third domain {Xenopus laevis [TaxId: 8355]}	97.16
d1njqa_	37	SUPERMAN zinc finger domain {Thale cress (Arabidop	97.09
d1znfa_	26	XFIN, third domain {Xenopus laevis [TaxId: 8355]}	97.04
d2adra2	31	ADR1 {Synthetic, based on Saccharomyces cerevisiae	97.04
d2dlqa3	30	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	97.01
d2adra2	31	ADR1 {Synthetic, based on Saccharomyces cerevisiae	96.93
d2dlqa1	26	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	96.87
d2csha2	44	Zinc finger protein 297b {Human (Homo sapiens) [Ta	96.78
d2j7ja2	29	Transcription factor IIIA, TFIIIA {Xenopus laevis	96.64
d1njqa_	37	SUPERMAN zinc finger domain {Thale cress (Arabidop	96.56
d2j7ja2	29	Transcription factor IIIA, TFIIIA {Xenopus laevis	96.53
d2csha2	44	Zinc finger protein 297b {Human (Homo sapiens) [Ta	96.48
d2dlqa1	26	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	96.37
d2drpa2	26	Tramtrack protein (two zinc-finger peptide) {Droso	96.33
d2ct1a1	28	Transcriptional repressor CTCF {Human (Homo sapien	96.22
d1x5wa1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	96.04
d2drpa2	26	Tramtrack protein (two zinc-finger peptide) {Droso	95.92
d1x5wa1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	95.86
d1tf3a2	30	Transcription factor IIIA, TFIIIA {Xenopus laevis	95.7
d2dlqa2	28	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	95.48
d2ct1a1	28	Transcriptional repressor CTCF {Human (Homo sapien	95.41
d2dlqa2	28	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	95.39
d1tf3a2	30	Transcription factor IIIA, TFIIIA {Xenopus laevis	95.3
d1bhia_	38	Transactivation domain of cre-bp1/atf-2 {Human (Ho	95.21
d2glia4	31	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	95.11
d2glia4	31	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	94.93
d1x6ha1	37	Transcriptional repressor CTCF {Human (Homo sapien	94.71
d2ctda2	30	Zinc finger protein 512, ZNF512 {Human (Homo sapie	94.58
d1bhia_	38	Transactivation domain of cre-bp1/atf-2 {Human (Ho	94.57
d1tf3a3	31	Transcription factor IIIA, TFIIIA {Xenopus laevis	93.55
d2eppa1	53	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	93.44
d2eppa1	53	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	93.32
d1x6ha1	37	Transcriptional repressor CTCF {Human (Homo sapien	93.22
d1y0jb1	36	U-shaped transcription factor, different fingers {	92.18
d1ubdc1	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	91.23
d1y0jb1	36	U-shaped transcription factor, different fingers {	90.72
d1tf3a3	31	Transcription factor IIIA, TFIIIA {Xenopus laevis	90.53
d2drpa1	37	Tramtrack protein (two zinc-finger peptide) {Droso	90.47
d1tf3a1	31	Transcription factor IIIA, TFIIIA {Xenopus laevis	90.45
d2drpa1	37	Tramtrack protein (two zinc-finger peptide) {Droso	89.79
d1x3ca1	61	Zinc finger protein 292, ZNF292 {Human (Homo sapie	88.76
d2glia2	33	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	88.51
d2ctda2	30	Zinc finger protein 512, ZNF512 {Human (Homo sapie	88.3
d1yuja_	54	GAGA factor {Drosophila melanogaster [TaxId: 7227]	87.68
d2glia2	33	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	87.49
d2dlka1	30	Zinc finger protein 692, ZNF692 {Human (Homo sapie	87.05
d2ghfa2	36	Zinc fingers and homeoboxes protein 1, ZHX1 {Human	86.98
d1zr9a1	67	Zinc finger protein 593, ZNF593 {Human (Homo sapie	86.68
d1tf3a1	31	Transcription factor IIIA, TFIIIA {Xenopus laevis	86.64
d1x6fa1	75	Zinc finger protein 462, ZNF462 {Human (Homo sapie	86.61
d1ubdc1	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	86.51
d1vd4a_	62	Transcription initiation factor TFIIE-alpha {Human	86.04
d1yuja_	54	GAGA factor {Drosophila melanogaster [TaxId: 7227]	85.96
d1vd4a_	62	Transcription initiation factor TFIIE-alpha {Human	84.89
d1zr9a1	67	Zinc finger protein 593, ZNF593 {Human (Homo sapie	84.73
d1x6fa1	75	Zinc finger protein 462, ZNF462 {Human (Homo sapie	82.73
d1nnqa2	37	Rubrerythrin, C-terminal domain {Archaeon Pyrococc	82.47
d2ghfa2	36	Zinc fingers and homeoboxes protein 1, ZHX1 {Human	82.46

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.43  E-value=2.6e-14  Score=96.38  Aligned_cols=50  Identities=26%  Similarity=0.525  Sum_probs=35.8

Q ss_pred             CCccccccchhhcCCHHHHHHHHhhccCCCCCcccccccccccCCHHHHHHhH
Q psy8169          15 VENHMCELCYKVFESRENLMRHLKIHDDKESKRFKCEQCDKRFSSNAELNKHS   67 (843)
Q Consensus        15 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~C~~C~~~f~~~~~l~~H~   67 (843)
                      +++|.|. ||++|.....|..|+++|++  ++||.|++|+++|.+...|..|+
T Consensus         1 EK~y~C~-Cgk~F~~~~~l~~H~~~Ht~--ekpy~C~~C~k~F~~~~~L~~H~   50 (53)
T d2csha1           1 DKLYPCQ-CGKSFTHKSQRDRHMSMHLG--LRPYGCGVCGKKFKMKHHLVGHM   50 (53)
T ss_dssp             CCCEECT-TSCEESSHHHHHHHHHHHSC--CCSEECTTTSCEESSSHHHHHHH
T ss_pred             CcCCCCC-CCCeECCHHHhHHHhhcccc--ccCCcCCCcCCEecCHHHHHHHH
Confidence            4677773 77777777777777777776  46777777777777777777776

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.39  E-value=1.1e-13  Score=93.30  Aligned_cols=51  Identities=31%  Similarity=0.574  Sum_probs=49.3

Q ss_pred             eeecCcChhccCChHHHHHHHHHhcCCCceeccccchhcCChhhHHHHHHHc
Q psy8169         275 YLTCLICFKTFLTEVDLGKHMKMHMDDNQIQCRFCNKYFSRNYNLKQHMKTC  326 (843)
Q Consensus       275 ~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~~C~~~f~~~~~L~~H~~~h  326 (843)
                      +|.|. |++.|.....|..|+++|++++||.|..|+++|.+...|..|+++|
T Consensus         3 ~y~C~-Cgk~F~~~~~l~~H~~~Ht~ekpy~C~~C~k~F~~~~~L~~H~r~H   53 (53)
T d2csha1           3 LYPCQ-CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIH   53 (53)
T ss_dssp             CEECT-TSCEESSHHHHHHHHHHHSCCCSEECTTTSCEESSSHHHHHHHTTT
T ss_pred             CCCCC-CCCeECCHHHhHHHhhccccccCCcCCCcCCEecCHHHHHHHHhcC
Confidence            79995 9999999999999999999999999999999999999999999876

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.16  E-value=8.1e-12  Score=74.99  Aligned_cols=36  Identities=33%  Similarity=0.722  Sum_probs=25.0

Q ss_pred             CCcccccccccccCCHHHHHHhHHhhccCCCceeCC
Q psy8169          45 SKRFKCEQCDKRFSSNAELNKHSSAIHQRLKLHECD   80 (843)
Q Consensus        45 ~~~~~C~~C~~~f~~~~~l~~H~~~~h~~~~~~~C~   80 (843)
                      +|||+|+.||++|+....|..|++.+|++++||+|+
T Consensus         3 ~Kpy~C~~Cgk~F~~~~~L~~H~r~~Ht~ekpy~C~   38 (39)
T d2epsa1           3 GKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQ   38 (39)
T ss_dssp             SCCEECSSSCCEESSHHHHHHHHHHTSCCCCCCCSS
T ss_pred             CCCccCCCCCCCcCChHHhhccCcCccCCCcCcCCc
Confidence            467777777777777777777765567777777765

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.08  E-value=1.5e-11  Score=74.27  Aligned_cols=37  Identities=19%  Similarity=0.335  Sum_probs=31.0

Q ss_pred             HHHhhcCCCCccccccchhhcCCHHHHHHHHhhccCC
Q psy8169           7 EHIKSHEYVENHMCELCYKVFESRENLMRHLKIHDDK   43 (843)
Q Consensus         7 ~h~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~   43 (843)
                      .|+++|++++||.|++|+++|...+.|..|+++|+||
T Consensus         2 rH~~~Ht~ekpy~C~~CgK~F~~~s~L~~H~r~HtGE   38 (38)
T d2cota2           2 RSEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTGE   38 (38)
T ss_dssp             CCCSCCCCSCSSBCSSSCCBCSCHHHHHHHHTTTCCS
T ss_pred             ccCcccCCCCCEecCCCCceeeCHHHHHHhCccCCCC
Confidence            3778888888888888888888888888888888873

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.04  E-value=4.7e-11  Score=68.49  Aligned_cols=33  Identities=24%  Similarity=0.400  Sum_probs=28.5

Q ss_pred             hcCCCCccccccchhhcCCHHHHHHHHhhccCC
Q psy8169          11 SHEYVENHMCELCYKVFESRENLMRHLKIHDDK   43 (843)
Q Consensus        11 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~   43 (843)
                      +|+|++||.|.+|+++|...+.|..|+++|++|
T Consensus         1 IHTgekpy~C~~Cgk~F~~~~~L~~H~r~HtgE   33 (33)
T d1x6ea1           1 IHSGEKPYGCVECGKAFSRSSILVQHQRVHTGE   33 (33)
T ss_dssp             TTTTCCCEECSSSCCEESSHHHHHHHHHGGGCS
T ss_pred             CcCCCCCeeCCCCCCEeCchHHhHhhccccCCC
Confidence            588889999999999999999999999888873

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.02  E-value=4.2e-11  Score=71.71  Aligned_cols=35  Identities=20%  Similarity=0.317  Sum_probs=29.6

Q ss_pred             HHhhcCCCCccccccchhhcCCHHHHHHHHhhccC
Q psy8169           8 HIKSHEYVENHMCELCYKVFESRENLMRHLKIHDD   42 (843)
Q Consensus         8 h~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~   42 (843)
                      |.|+|+|++||+|++|+++|..+..|..|+++|.+
T Consensus         2 h~R~HTgeKPy~C~~C~k~F~~~~~L~~H~r~H~~   36 (37)
T d1p7aa_           2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRHML   36 (37)
T ss_dssp             CSSTTCCSSSBCCTTTCCCBSSHHHHHHHHGGGTC
T ss_pred             CCCccCCccCeEeCCCCCEecCHHHHHHHHhcCcC
Confidence            67888888888888888888888888888888853

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.01  E-value=7.7e-11  Score=69.93  Aligned_cols=34  Identities=26%  Similarity=0.420  Sum_probs=30.5

Q ss_pred             hhcCCCCccccccchhhcCCHHHHHHHHhhccCC
Q psy8169          10 KSHEYVENHMCELCYKVFESRENLMRHLKIHDDK   43 (843)
Q Consensus        10 ~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~   43 (843)
                      |+|+|++||.|.+|+++|...+.|..|+++|+++
T Consensus         1 R~HTgekPy~C~~C~k~F~~~~~L~~H~r~H~~~   34 (36)
T d1x6ha2           1 RTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDP   34 (36)
T ss_dssp             TTCCCCCCEECSSSSCEESSHHHHHHHHHHTTCS
T ss_pred             CCCCCCCCEECCCCCCCcCCHhHHHHhCcccCCC
Confidence            6899999999999999999999999999999863

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.01  E-value=8e-11  Score=70.61  Aligned_cols=37  Identities=27%  Similarity=0.576  Sum_probs=33.8

Q ss_pred             CCCccccccchhhcCCHHHHHHHHh-hccCCCCCcccccc
Q psy8169          14 YVENHMCELCYKVFESRENLMRHLK-IHDDKESKRFKCEQ   52 (843)
Q Consensus        14 ~~~~~~C~~C~~~f~~~~~l~~H~~-~h~~~~~~~~~C~~   52 (843)
                      .++||+|.+||+.|.....|.+||+ +|++  ++||+|++
T Consensus         2 ~~Kpy~C~~Cgk~F~~~~~L~~H~r~~Ht~--ekpy~C~i   39 (39)
T d2epsa1           2 VGKPYICQSCGKGFSRPDHLNGHIKQVHTS--ERPHKCQV   39 (39)
T ss_dssp             SSCCEECSSSCCEESSHHHHHHHHHHTSCC--CCCCCSSS
T ss_pred             CCCCccCCCCCCCcCChHHhhccCcCccCC--CcCcCCcC
Confidence            4789999999999999999999986 7998  59999974

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.87  E-value=4.1e-10  Score=66.54  Aligned_cols=33  Identities=15%  Similarity=0.317  Sum_probs=23.5

Q ss_pred             hhcCCCCccccccchhhcCCHHHHHHHHhhccC
Q psy8169          10 KSHEYVENHMCELCYKVFESRENLMRHLKIHDD   42 (843)
Q Consensus        10 ~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~   42 (843)
                      |+|+|++||+|++|++.|..+.+|.+|++.+++
T Consensus         1 R~HTgekP~~C~~C~k~F~~~~~L~~H~~~~H~   33 (36)
T d2ct1a2           1 RTHSGEKPYECYICHARFTQSGTMKMHILQKHT   33 (36)
T ss_dssp             CCCSCCCSEECTTTCCEESCHHHHHHHHHHHSS
T ss_pred             CccCCCCCEeCCCCcccccchHHHHHHcccccC
Confidence            467777777777777777777777777654443

>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein ZFPM1 (FOG-1)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.86  E-value=5.2e-10  Score=65.06  Aligned_cols=31  Identities=32%  Similarity=0.711  Sum_probs=24.5

Q ss_pred             cCCCCccccccchhhcCCHHHHHHHHhhccC
Q psy8169          12 HEYVENHMCELCYKVFESRENLMRHLKIHDD   42 (843)
Q Consensus        12 h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~   42 (843)
                      |+|++||.|++|++.|..+..|.+|+++|++
T Consensus         2 ~TGekPy~C~~C~k~F~~~~~L~~H~r~Ht~   32 (35)
T d1srka_           2 SSGKRPFVCRICLSAFTTKANCARHLKVHTD   32 (35)
T ss_dssp             CSCCSCEECSSSCCEESSHHHHHHHHGGGTS
T ss_pred             CCCCccccCCCCCCcccChHHHHHHccccCC
Confidence            6778888888888888888888888888765

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.84  E-value=7.5e-10  Score=63.40  Aligned_cols=33  Identities=33%  Similarity=0.517  Sum_probs=29.6

Q ss_pred             HhcCCCceeccccchhcCChhhHHHHHHHccCC
Q psy8169         297 MHMDDNQIQCRFCNKYFSRNYNLKQHMKTCTKN  329 (843)
Q Consensus       297 ~H~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~  329 (843)
                      +|++++||.|..|+++|...+.|..|+++|+++
T Consensus         1 IHTgekpy~C~~Cgk~F~~~~~L~~H~r~HtgE   33 (33)
T d1x6ea1           1 IHSGEKPYGCVECGKAFSRSSILVQHQRVHTGE   33 (33)
T ss_dssp             TTTTCCCEECSSSCCEESSHHHHHHHHHGGGCS
T ss_pred             CcCCCCCeeCCCCCCEeCchHHhHhhccccCCC
Confidence            488999999999999999999999999999864

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.81  E-value=4.5e-10  Score=67.71  Aligned_cols=36  Identities=28%  Similarity=0.597  Sum_probs=33.5

Q ss_pred             hhhhccccCCCCCCccchhhcccccccccccccccccchhhhhhhHHHHhhhhhhhcC
Q psy8169         680 KHIRIFHTQNQPQHTNVIEVALGARANAAFIDRIRCELCDKSFTRKDSLKKHNRIFHG  737 (843)
Q Consensus       680 ~H~~~~H~~~~p~~~~~~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~L~~H~~~~H~  737 (843)
                      +|+++ |++++|                     |+|+.||++|...+.|..|+++|.|
T Consensus         2 rH~~~-Ht~ekp---------------------y~C~~CgK~F~~~s~L~~H~r~HtG   37 (38)
T d2cota2           2 RSEWQ-QRERRR---------------------YKCDECGKSFSHSSDLSKHRRTHTG   37 (38)
T ss_dssp             CCCSC-CCCSCS---------------------SBCSSSCCBCSCHHHHHHHHTTTCC
T ss_pred             ccCcc-cCCCCC---------------------EecCCCCceeeCHHHHHHhCccCCC
Confidence            68888 999999                     9999999999999999999999665

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.80  E-value=5.5e-10  Score=65.97  Aligned_cols=26  Identities=27%  Similarity=0.511  Sum_probs=24.4

Q ss_pred             ccccchhhhhhhHHHHhhhhhhhcCC
Q psy8169         713 IRCELCDKSFTRKDSLKKHNRIFHGG  738 (843)
Q Consensus       713 ~~C~~C~~~f~~~~~L~~H~~~~H~~  738 (843)
                      |+|++|+++|+.+..|++|++.+|+.
T Consensus         9 ~~C~~C~k~F~~~~~L~~H~~~~H~~   34 (36)
T d2ct1a2           9 YECYICHARFTQSGTMKMHILQKHTE   34 (36)
T ss_dssp             EECTTTCCEESCHHHHHHHHHHHSSS
T ss_pred             EeCCCCcccccchHHHHHHcccccCC
Confidence            99999999999999999999888873

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.79  E-value=6.1e-10  Score=66.00  Aligned_cols=25  Identities=36%  Similarity=0.763  Sum_probs=24.1

Q ss_pred             ccccchhhhhhhHHHHhhhhhhhcC
Q psy8169         713 IRCELCDKSFTRKDSLKKHNRIFHG  737 (843)
Q Consensus       713 ~~C~~C~~~f~~~~~L~~H~~~~H~  737 (843)
                      |+|.+||++|..++.|..|+++|++
T Consensus         9 y~C~~C~k~F~~~~~L~~H~r~H~~   33 (36)
T d1x6ha2           9 YACSHCDKTFRQKQLLDMHFKRYHD   33 (36)
T ss_dssp             EECSSSSCEESSHHHHHHHHHHTTC
T ss_pred             EECCCCCCCcCCHhHHHHhCcccCC
Confidence            9999999999999999999999876

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.78  E-value=7.3e-10  Score=66.22  Aligned_cols=34  Identities=35%  Similarity=0.609  Sum_probs=31.5

Q ss_pred             hhhccccCCCCCCccchhhcccccccccccccccccchhhhhhhHHHHhhhhhhhc
Q psy8169         681 HIRIFHTQNQPQHTNVIEVALGARANAAFIDRIRCELCDKSFTRKDSLKKHNRIFH  736 (843)
Q Consensus       681 H~~~~H~~~~p~~~~~~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~L~~H~~~~H  736 (843)
                      |.|. |++++|                     |+|++|+++|.+++.|..|++.|-
T Consensus         2 h~R~-HTgeKP---------------------y~C~~C~k~F~~~~~L~~H~r~H~   35 (37)
T d1p7aa_           2 STRG-STGIKP---------------------FQCPDCDRSFSRSDHLALHRKRHM   35 (37)
T ss_dssp             CSST-TCCSSS---------------------BCCTTTCCCBSSHHHHHHHHGGGT
T ss_pred             CCCc-cCCccC---------------------eEeCCCCCEecCHHHHHHHHhcCc
Confidence            6777 999999                     999999999999999999999854

>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.77  E-value=1.1e-09  Score=59.85  Aligned_cols=28  Identities=21%  Similarity=0.656  Sum_probs=17.2

Q ss_pred             CCccccccchhhcCCHHHHHHHHhhccC
Q psy8169          15 VENHMCELCYKVFESRENLMRHLKIHDD   42 (843)
Q Consensus        15 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~   42 (843)
                      ++||+|++|++.|.....|.+|+++|+|
T Consensus         1 EKPy~C~~C~k~F~~~~~L~~H~r~HTG   28 (28)
T d1a1ia2           1 QKPFQCRICMRNFSRSDHLTTHIRTHTG   28 (28)
T ss_dssp             CCCEECTTTCCEESCHHHHHHHHHHHHC
T ss_pred             CcCccCCCCcCEecccccccccCCCccC
Confidence            3566666666666666666666666653

>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein ZFPM1 (FOG-1)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.74  E-value=2.3e-09  Score=62.35  Aligned_cols=32  Identities=25%  Similarity=0.487  Sum_probs=27.8

Q ss_pred             hcCCCceeccccchhcCChhhHHHHHHHccCC
Q psy8169         298 HMDDNQIQCRFCNKYFSRNYNLKQHMKTCTKN  329 (843)
Q Consensus       298 H~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~  329 (843)
                      |+|++||+|.+|++.|.+...|..|+++|+..
T Consensus         2 ~TGekPy~C~~C~k~F~~~~~L~~H~r~Ht~~   33 (35)
T d1srka_           2 SSGKRPFVCRICLSAFTTKANCARHLKVHTDT   33 (35)
T ss_dssp             CSCCSCEECSSSCCEESSHHHHHHHHGGGTSC
T ss_pred             CCCCccccCCCCCCcccChHHHHHHccccCCc
Confidence            67889999999999999999999999988754

>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=98.72  E-value=3.1e-09  Score=58.94  Aligned_cols=29  Identities=38%  Similarity=0.685  Sum_probs=21.6

Q ss_pred             cccccccccccccCHHHHHHHHhhcCCCc
Q psy8169         153 MKFECYVCSKVLATSHSLKRHLLIHNGPK  181 (843)
Q Consensus       153 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~  181 (843)
                      +||.|++|++.|...+.|..|+++|+|++
T Consensus         1 kp~~C~~C~k~F~~~~~L~~H~r~HTgEK   29 (29)
T d2adra1           1 RSFVCEVCTRAFARQEHLKRHYRSHTNEK   29 (29)
T ss_dssp             CCBCCTTTCCCBSCHHHHHHHHHTTTSSC
T ss_pred             CcCCCCCCCCCCCCchHcccccCcccCCC
Confidence            46777777777777777777777777753

>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=98.71  E-value=3.2e-09  Score=58.89  Aligned_cols=28  Identities=32%  Similarity=0.819  Sum_probs=19.9

Q ss_pred             CccccccchhhcCCHHHHHHHHhhccCC
Q psy8169          16 ENHMCELCYKVFESRENLMRHLKIHDDK   43 (843)
Q Consensus        16 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~   43 (843)
                      +||.|++|++.|...+.|.+|+++|+|+
T Consensus         1 kp~~C~~C~k~F~~~~~L~~H~r~HTgE   28 (29)
T d2adra1           1 RSFVCEVCTRAFARQEHLKRHYRSHTNE   28 (29)
T ss_dssp             CCBCCTTTCCCBSCHHHHHHHHHTTTSS
T ss_pred             CcCCCCCCCCCCCCchHcccccCcccCC
Confidence            4677777777777777777777777763

>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.70  E-value=2.2e-09  Score=58.60  Aligned_cols=28  Identities=29%  Similarity=0.683  Sum_probs=20.6

Q ss_pred             CcccccccccccccCHHHHHHHHhhcCC
Q psy8169         152 GMKFECYVCSKVLATSHSLKRHLLIHNG  179 (843)
Q Consensus       152 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~  179 (843)
                      ++||.|.+|++.|..+++|..|+++|+|
T Consensus         1 EKPy~C~~C~k~F~~~~~L~~H~r~HTG   28 (28)
T d1a1ia2           1 QKPFQCRICMRNFSRSDHLTTHIRTHTG   28 (28)
T ss_dssp             CCCEECTTTCCEESCHHHHHHHHHHHHC
T ss_pred             CcCccCCCCcCEecccccccccCCCccC
Confidence            3577777777777777777777777764

>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.63  E-value=7.6e-09  Score=60.72  Aligned_cols=33  Identities=36%  Similarity=0.706  Sum_probs=30.4

Q ss_pred             eecCc--ChhccCChHHHHHHHHHhcCCCceeccc
Q psy8169         276 LTCLI--CFKTFLTEVDLGKHMKMHMDDNQIQCRF  308 (843)
Q Consensus       276 ~~C~~--C~~~f~~~~~L~~H~~~H~~~~~~~C~~  308 (843)
                      |.|++  |++.|.....|..|+++|++++||.|++
T Consensus         2 f~C~~~~C~k~F~~~~~L~~H~r~Htgekpy~C~f   36 (36)
T d2dlka2           2 FSCPEPACGKSFNFKKHLKEHMKLHSDTRDYICEF   36 (36)
T ss_dssp             EECSCTTTCCEESSHHHHHHHHHHHHTSCCCSCCS
T ss_pred             eECCCCCCCCeeCChhHhccccCeeCCCCCEeCCC
Confidence            78887  9999999999999999999999999974

>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.62  E-value=6.2e-09  Score=57.55  Aligned_cols=28  Identities=32%  Similarity=0.611  Sum_probs=19.5

Q ss_pred             cccccccccccccCHHHHHHHHhhcCCC
Q psy8169         153 MKFECYVCSKVLATSHSLKRHLLIHNGP  180 (843)
Q Consensus       153 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~  180 (843)
                      +||.|++|++.|..++.|..|+++|+|+
T Consensus         1 Kpy~C~~C~k~F~~~s~L~~H~r~Htge   28 (29)
T d1sp1a_           1 KKFACPECPKRFMRSDHLSKHIKTHQNK   28 (29)
T ss_dssp             CCSCCTTTTCCCSCSHHHHHHHHGGGCC
T ss_pred             CCEECCcCCCeecchHHhhhhcCccCCc
Confidence            3667777777777777777777777665

>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.62  E-value=6.4e-09  Score=57.48  Aligned_cols=27  Identities=30%  Similarity=0.658  Sum_probs=18.6

Q ss_pred             CccccccchhhcCCHHHHHHHHhhccC
Q psy8169          16 ENHMCELCYKVFESRENLMRHLKIHDD   42 (843)
Q Consensus        16 ~~~~C~~C~~~f~~~~~l~~H~~~h~~   42 (843)
                      +||.|++|++.|..++.|.+|+++|++
T Consensus         1 Kpy~C~~C~k~F~~~s~L~~H~r~Htg   27 (29)
T d1sp1a_           1 KKFACPECPKRFMRSDHLSKHIKTHQN   27 (29)
T ss_dssp             CCSCCTTTTCCCSCSHHHHHHHHGGGC
T ss_pred             CCEECCcCCCeecchHHhhhhcCccCC
Confidence            466777777777777777777777766

>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.60  E-value=7.3e-09  Score=60.82  Aligned_cols=32  Identities=34%  Similarity=0.808  Sum_probs=21.8

Q ss_pred             ccccc--chhhcCCHHHHHHHHhhccCCCCCccccc
Q psy8169          18 HMCEL--CYKVFESRENLMRHLKIHDDKESKRFKCE   51 (843)
Q Consensus        18 ~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~~~C~   51 (843)
                      |.|+.  |+++|..+..|.+|+++|++  ++||.|+
T Consensus         2 f~C~~~~C~k~F~~~~~L~~H~r~Htg--ekpy~C~   35 (36)
T d2dlka2           2 FSCPEPACGKSFNFKKHLKEHMKLHSD--TRDYICE   35 (36)
T ss_dssp             EECSCTTTCCEESSHHHHHHHHHHHHT--SCCCSCC
T ss_pred             eECCCCCCCCeeCChhHhccccCeeCC--CCCEeCC
Confidence            56655  77777777777777777776  4677765

>d1x6ea2 g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.59  E-value=7.2e-09  Score=54.79  Aligned_cols=25  Identities=32%  Similarity=0.608  Sum_probs=15.7

Q ss_pred             CccccccchhhcCCHHHHHHHHhhc
Q psy8169          16 ENHMCELCYKVFESRENLMRHLKIH   40 (843)
Q Consensus        16 ~~~~C~~C~~~f~~~~~l~~H~~~h   40 (843)
                      +||.|.+||++|...+.|..|+++|
T Consensus         1 KPy~C~eCgK~F~~~s~L~~HqriH   25 (26)
T d1x6ea2           1 KPYKCLECGKAFSQNSGLINHQRIH   25 (26)
T ss_dssp             CCEECSSSCCEESSHHHHHHHHHHH
T ss_pred             CCccCCCCcCeeccCcccccCccCC
Confidence            3566666666666666666666665

>d2glia3 g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.48  E-value=3.5e-08  Score=54.82  Aligned_cols=27  Identities=37%  Similarity=0.739  Sum_probs=19.6

Q ss_pred             Ccccccc--chhhcCCHHHHHHHHhhccC
Q psy8169          16 ENHMCEL--CYKVFESRENLMRHLKIHDD   42 (843)
Q Consensus        16 ~~~~C~~--C~~~f~~~~~l~~H~~~h~~   42 (843)
                      +||+|++  |+++|...+.|.+|+++|+|
T Consensus         1 kp~~C~~~gCgk~F~~~~~L~~H~r~HtG   29 (30)
T d2glia3           1 KPHKCTFEGCRKSYSRLENLKTHLRSHTG   29 (30)
T ss_dssp             CCCCCCSTTCCCCCSSHHHHHHHHHHTTT
T ss_pred             CCeeCCCCCCCceECChhHhhhhcCcCcC
Confidence            4677776  77777777777777777765

>d1ubdc3 g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.43  E-value=3.6e-08  Score=54.94  Aligned_cols=27  Identities=33%  Similarity=0.602  Sum_probs=18.3

Q ss_pred             Ccccccc--chhhcCCHHHHHHHHhhccC
Q psy8169          16 ENHMCEL--CYKVFESRENLMRHLKIHDD   42 (843)
Q Consensus        16 ~~~~C~~--C~~~f~~~~~l~~H~~~h~~   42 (843)
                      +||.|++  |+++|...++|.+|+++|+|
T Consensus         1 kp~~C~~~gCgk~F~~~~~L~~H~r~HTG   29 (30)
T d1ubdc3           1 KPFQCTFEGCGKRFSLDFNLRTHVRIHTG   29 (30)
T ss_dssp             CCEECCSTTCCCEESCHHHHHHHHHHHHC
T ss_pred             CCccCCCCCCCceECcHHHcCccccccCC
Confidence            4666765  77777777777777777665

>d1x6ea2 g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.43  E-value=4.3e-08  Score=51.80  Aligned_cols=25  Identities=28%  Similarity=0.636  Sum_probs=16.8

Q ss_pred             cccccccccccccCHHHHHHHHhhc
Q psy8169         153 MKFECYVCSKVLATSHSLKRHLLIH  177 (843)
Q Consensus       153 ~~~~C~~C~~~f~~~~~l~~H~~~h  177 (843)
                      +||.|..||+.|...+.|..|+++|
T Consensus         1 KPy~C~eCgK~F~~~s~L~~HqriH   25 (26)
T d1x6ea2           1 KPYKCLECGKAFSQNSGLINHQRIH   25 (26)
T ss_dssp             CCEECSSSCCEESSHHHHHHHHHHH
T ss_pred             CCccCCCCcCeeccCcccccCccCC
Confidence            3666666666666666666666666

>d1ncsa_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.42  E-value=8e-09  Score=65.22  Aligned_cols=39  Identities=36%  Similarity=0.801  Sum_probs=33.1

Q ss_pred             HHHHHHHHhcCCCceeccc--cchhcCChhhHHHHHHHccCC
Q psy8169         290 DLGKHMKMHMDDNQIQCRF--CNKYFSRNYNLKQHMKTCTKN  329 (843)
Q Consensus       290 ~L~~H~~~H~~~~~~~C~~--C~~~f~~~~~L~~H~~~h~~~  329 (843)
                      .|..|+. |.+++||.|.+  |+++|...+.|..|+++|+++
T Consensus         6 ~l~~h~~-h~gekpy~C~~~~C~k~F~~~~~L~~H~r~Htge   46 (47)
T d1ncsa_           6 SIDKYVK-EMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLED   46 (47)
T ss_dssp             SGGGSCE-EETTTEEECCCTTCCCEECSSSSHHHHHHHHTTT
T ss_pred             hhcchhh-ccCCCCeECCcCCCCccccCchHHHhhcccccCC
Confidence            4556664 89999999987  999999999999999999875

>d2glia3 g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.38  E-value=8.8e-08  Score=53.16  Aligned_cols=28  Identities=32%  Similarity=0.572  Sum_probs=19.7

Q ss_pred             ccccccc--ccccccCHHHHHHHHhhcCCC
Q psy8169         153 MKFECYV--CSKVLATSHSLKRHLLIHNGP  180 (843)
Q Consensus       153 ~~~~C~~--C~~~f~~~~~l~~H~~~h~~~  180 (843)
                      +||.|++  |++.|...++|+.|+++|+|+
T Consensus         1 kp~~C~~~gCgk~F~~~~~L~~H~r~HtGE   30 (30)
T d2glia3           1 KPHKCTFEGCRKSYSRLENLKTHLRSHTGE   30 (30)
T ss_dssp             CCCCCCSTTCCCCCSSHHHHHHHHHHTTTC
T ss_pred             CCeeCCCCCCCceECChhHhhhhcCcCcCC
Confidence            3677766  777777777777777777664

>d1ncsa_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.38  E-value=1.5e-08  Score=63.89  Aligned_cols=40  Identities=20%  Similarity=0.553  Sum_probs=35.3

Q ss_pred             hhhhhhhhhccccCCCCCCccchhhcccccccccccccccccc--hhhhhhhHHHHhhhhhhhcC
Q psy8169         675 KDSLKKHIRIFHTQNQPQHTNVIEVALGARANAAFIDRIRCEL--CDKSFTRKDSLKKHNRIFHG  737 (843)
Q Consensus       675 ~~~L~~H~~~~H~~~~p~~~~~~~~~~~~~~~~~~~~~~~C~~--C~~~f~~~~~L~~H~~~~H~  737 (843)
                      .+.|..|+.  |.+++|                     |+|++  |+++|..++.|..|+++|.+
T Consensus         4 ~~~l~~h~~--h~gekp---------------------y~C~~~~C~k~F~~~~~L~~H~r~Htg   45 (47)
T d1ncsa_           4 RGSIDKYVK--EMPDKT---------------------FECLFPGCTKTFKRRYNIRSHIQTHLE   45 (47)
T ss_dssp             CSSGGGSCE--EETTTE---------------------EECCCTTCCCEECSSSSHHHHHHHHTT
T ss_pred             cchhcchhh--ccCCCC---------------------eECCcCCCCccccCchHHHhhcccccC
Confidence            456778874  999999                     99988  99999999999999999766

>d1ubdc3 g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.32  E-value=9.2e-08  Score=53.26  Aligned_cols=28  Identities=32%  Similarity=0.727  Sum_probs=18.7

Q ss_pred             ccccccc--ccccccCHHHHHHHHhhcCCC
Q psy8169         153 MKFECYV--CSKVLATSHSLKRHLLIHNGP  180 (843)
Q Consensus       153 ~~~~C~~--C~~~f~~~~~l~~H~~~h~~~  180 (843)
                      +||.|++  |++.|...++|..|+++|+|+
T Consensus         1 kp~~C~~~gCgk~F~~~~~L~~H~r~HTGE   30 (30)
T d1ubdc3           1 KPFQCTFEGCGKRFSLDFNLRTHVRIHTGD   30 (30)
T ss_dssp             CCEECCSTTCCCEESCHHHHHHHHHHHHCC
T ss_pred             CCccCCCCCCCceECcHHHcCccccccCCC
Confidence            3666765  777777777777777776653

>d1sp2a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.23  E-value=2.9e-07  Score=51.71  Aligned_cols=27  Identities=33%  Similarity=0.663  Sum_probs=16.8

Q ss_pred             Cccccc--cchhhcCCHHHHHHHHhhccC
Q psy8169          16 ENHMCE--LCYKVFESRENLMRHLKIHDD   42 (843)
Q Consensus        16 ~~~~C~--~C~~~f~~~~~l~~H~~~h~~   42 (843)
                      +||.|+  .|++.|...++|.+|+++|++
T Consensus         1 kpf~C~~~~C~k~F~~~~~L~~H~r~Htg   29 (31)
T d1sp2a_           1 RPFMCTWSYCGKRFTRSDELQRHKRTHTG   29 (31)
T ss_dssp             CCCBCCSTTCCCBCSSHHHHHHHHTTTSC
T ss_pred             CcCCCcCCCCCcCcCChhHhhhhcCcccc
Confidence            356663  366666666666666666665

>d1sp2a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.20  E-value=3.9e-07  Score=51.17  Aligned_cols=29  Identities=38%  Similarity=0.651  Sum_probs=20.0

Q ss_pred             cccccc--cccccccCHHHHHHHHhhcCCCc
Q psy8169         153 MKFECY--VCSKVLATSHSLKRHLLIHNGPK  181 (843)
Q Consensus       153 ~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~  181 (843)
                      +||.|+  .|++.|...++|..|+++|+|++
T Consensus         1 kpf~C~~~~C~k~F~~~~~L~~H~r~HtgeK   31 (31)
T d1sp2a_           1 RPFMCTWSYCGKRFTRSDELQRHKRTHTGEK   31 (31)
T ss_dssp             CCCBCCSTTCCCBCSSHHHHHHHHTTTSCCC
T ss_pred             CcCCCcCCCCCcCcCChhHhhhhcCcccccC
Confidence            367774  47777777777777777777653

>d1a1ia1 g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.19  E-value=1.1e-07  Score=52.17  Aligned_cols=26  Identities=38%  Similarity=0.867  Sum_probs=23.7

Q ss_pred             cccccc--hhhhhhhHHHHhhhhhhhcC
Q psy8169         712 RIRCEL--CDKSFTRKDSLKKHNRIFHG  737 (843)
Q Consensus       712 ~~~C~~--C~~~f~~~~~L~~H~~~~H~  737 (843)
                      +|+|++  |+++|++.+.|.+|+++|.|
T Consensus         2 p~~C~~~gC~k~F~~~~~L~~H~r~HtG   29 (29)
T d1a1ia1           2 PYACPVESCDRRFSRSADLTRHIRIHTG   29 (29)
T ss_dssp             CEECCSTTCCCEESSHHHHHHHTHHHHT
T ss_pred             CeECCCCCCCcEECchhHhhhhcCccCC
Confidence            499999  99999999999999999754

>d1zfda_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.17  E-value=3.9e-07  Score=51.39  Aligned_cols=28  Identities=32%  Similarity=0.610  Sum_probs=18.1

Q ss_pred             CCcccccc--chhhcCCHHHHHHHHhhccC
Q psy8169          15 VENHMCEL--CYKVFESRENLMRHLKIHDD   42 (843)
Q Consensus        15 ~~~~~C~~--C~~~f~~~~~l~~H~~~h~~   42 (843)
                      ++||.|++  |++.|....+|.+|+++|+.
T Consensus         1 ErP~~C~~pgC~k~F~r~~~L~~H~r~Ht~   30 (32)
T d1zfda_           1 DRPYSCDHPGCDKAFVRNHDLIRHKKSHQE   30 (32)
T ss_dssp             CCSBCCCCTTCCCCBSSSHHHHHHHGGGTC
T ss_pred             CcCeECcCCCCCCeeCCHHHHHHHhhhccC
Confidence            35666665  66666666666666666654

>d1a1ia1 g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.17  E-value=2.6e-07  Score=50.73  Aligned_cols=27  Identities=30%  Similarity=0.710  Sum_probs=16.7

Q ss_pred             Ccccccc--chhhcCCHHHHHHHHhhccC
Q psy8169          16 ENHMCEL--CYKVFESRENLMRHLKIHDD   42 (843)
Q Consensus        16 ~~~~C~~--C~~~f~~~~~l~~H~~~h~~   42 (843)
                      +||.|++  |++.|.....|.+|+++|+|
T Consensus         1 Kp~~C~~~gC~k~F~~~~~L~~H~r~HtG   29 (29)
T d1a1ia1           1 RPYACPVESCDRRFSRSADLTRHIRIHTG   29 (29)
T ss_dssp             CCEECCSTTCCCEESSHHHHHHHTHHHHT
T ss_pred             CCeECCCCCCCcEECchhHhhhhcCccCC
Confidence            3566655  66666666666666666653

>d1zfda_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.09  E-value=9.9e-07  Score=49.70  Aligned_cols=27  Identities=33%  Similarity=0.662  Sum_probs=24.9

Q ss_pred             CCCccccc--ccccccchHHHHHHHHHhhc
Q psy8169         562 KSRIPCEL--CYKTFTRKDSLRKHMKIFHT  589 (843)
Q Consensus       562 ~~~~~C~~--C~~~f~~~~~L~~H~~~~H~  589 (843)
                      ++||.|.+  |+++|.+.+.|++|+++ |.
T Consensus         1 ErP~~C~~pgC~k~F~r~~~L~~H~r~-Ht   29 (32)
T d1zfda_           1 DRPYSCDHPGCDKAFVRNHDLIRHKKS-HQ   29 (32)
T ss_dssp             CCSBCCCCTTCCCCBSSSHHHHHHHGG-GT
T ss_pred             CcCeECcCCCCCCeeCCHHHHHHHhhh-cc
Confidence            57999988  99999999999999999 55

>d2dmda2 g.37.1.1 (A:8-33) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.06  E-value=1.3e-06  Score=43.04  Aligned_cols=25  Identities=36%  Similarity=0.767  Sum_probs=16.3

Q ss_pred             cccccccccccCHHHHHHHHhhcCC
Q psy8169         155 FECYVCSKVLATSHSLKRHLLIHNG  179 (843)
Q Consensus       155 ~~C~~C~~~f~~~~~l~~H~~~h~~  179 (843)
                      .+|.+|++.|+.+..|+.||+.|+|
T Consensus         2 hkc~~c~kcfsrkdklk~hmr~htg   26 (26)
T d2dmda2           2 HKCEVCGKCFSRKDKLKTHMRCHTG   26 (26)
T ss_dssp             CCBTTTTBCCCCHHHHHHHGGGCCC
T ss_pred             CccchhhhHhcchhHHHHHhhccCC
Confidence            4566666666666666666666654

>d1ubdc4 g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.03  E-value=4.1e-07  Score=49.20  Aligned_cols=24  Identities=38%  Similarity=0.787  Sum_probs=22.6

Q ss_pred             chhhch--hhhhhhhhhhHHHHHhHh
Q psy8169         774 EILCKI--CNRTFTRNYNLKKHMKTV  797 (843)
Q Consensus       774 ~~~C~~--C~~~F~~~~~L~~H~~~~  797 (843)
                      +|.|++  ||++|++.++|++|+|+|
T Consensus         2 Pf~C~~~gC~K~F~~~~~L~~H~r~H   27 (28)
T d1ubdc4           2 PYVCPFDGCNKKFAQSTNLKSHILTH   27 (28)
T ss_dssp             CCCCCSTTCCCCCSSTTTTHHHHHHH
T ss_pred             CcCCCCCCcCCcCCCHHHHHHHHhhc
Confidence            499999  999999999999999987

>d2dmda2 g.37.1.1 (A:8-33) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.00  E-value=1.9e-06  Score=42.47  Aligned_cols=25  Identities=36%  Similarity=0.844  Sum_probs=14.9

Q ss_pred             ccccccchhhcCCHHHHHHHHhhcc
Q psy8169          17 NHMCELCYKVFESRENLMRHLKIHD   41 (843)
Q Consensus        17 ~~~C~~C~~~f~~~~~l~~H~~~h~   41 (843)
                      |++|+.|++-|+.+..|..||+.|+
T Consensus         1 phkc~~c~kcfsrkdklk~hmr~ht   25 (26)
T d2dmda2           1 PHKCEVCGKCFSRKDKLKTHMRCHT   25 (26)
T ss_dssp             CCCBTTTTBCCCCHHHHHHHGGGCC
T ss_pred             CCccchhhhHhcchhHHHHHhhccC
Confidence            3456666666666666666666554

>d1ubdc4 g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.98  E-value=4.9e-07  Score=48.91  Aligned_cols=24  Identities=33%  Similarity=0.671  Sum_probs=12.8

Q ss_pred             cccccc--chhhcCCHHHHHHHHhhc
Q psy8169          17 NHMCEL--CYKVFESRENLMRHLKIH   40 (843)
Q Consensus        17 ~~~C~~--C~~~f~~~~~l~~H~~~h   40 (843)
                      ||.|+.  |+|+|....+|.+|+++|
T Consensus         2 Pf~C~~~gC~K~F~~~~~L~~H~r~H   27 (28)
T d1ubdc4           2 PYVCPFDGCNKKFAQSTNLKSHILTH   27 (28)
T ss_dssp             CCCCCSTTCCCCCSSTTTTHHHHHHH
T ss_pred             CcCCCCCCcCCcCCCHHHHHHHHhhc
Confidence            455544  555555555555555554

>d1a1ia3 g.37.1.1 (A:160-187) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.92  E-value=2.2e-06  Score=44.00  Aligned_cols=26  Identities=31%  Similarity=0.795  Sum_probs=24.2

Q ss_pred             CCCcccccccccccchHHHHHHHHHh
Q psy8169         562 KSRIPCELCYKTFTRKDSLRKHMKIF  587 (843)
Q Consensus       562 ~~~~~C~~C~~~f~~~~~L~~H~~~~  587 (843)
                      ++||.|.+||+.|......++|.++|
T Consensus         1 EkPf~C~~CgrkFArsderkRH~kiH   26 (28)
T d1a1ia3           1 EKPFACDICGRKFARSDERKRHTKIH   26 (28)
T ss_dssp             CCCEECTTTCCEESSHHHHHHHHGGG
T ss_pred             CCCcccchhhhhhhcchhhhhhhhhc
Confidence            47999999999999999999999983

>d2dmda3 g.37.1.1 (A:62-90) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.79  E-value=5.2e-06  Score=42.06  Aligned_cols=26  Identities=19%  Similarity=0.471  Sum_probs=13.7

Q ss_pred             CceeccccchhcCChhhHHHHHHHcc
Q psy8169         302 NQIQCRFCNKYFSRNYNLKQHMKTCT  327 (843)
Q Consensus       302 ~~~~C~~C~~~f~~~~~L~~H~~~h~  327 (843)
                      +||+|.+|.+.-...+.|..|++.|+
T Consensus         2 rpfkcqlcsy~srnssqltvhlr~ht   27 (29)
T d2dmda3           2 RPFKCQICPYASRNSSQLTVHLRSHT   27 (29)
T ss_dssp             CCEECSSSSCEESSHHHHHHHHTTCC
T ss_pred             CcceeeecccccCCchheEEeeeccc
Confidence            45555555555555555555555544

>d2epra1 g.37.1.1 (A:350-384) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.78  E-value=6.8e-06  Score=43.82  Aligned_cols=30  Identities=33%  Similarity=0.609  Sum_probs=19.3

Q ss_pred             ccccccchhhcCCHHHHHHHHhhccCCCCCcc
Q psy8169          17 NHMCELCYKVFESRENLMRHLKIHDDKESKRF   48 (843)
Q Consensus        17 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~   48 (843)
                      ...|.+||+.|..-..|.+|...|++  +|||
T Consensus         5 ~~~ce~cgk~frdvyhlnrhklshs~--ekpy   34 (35)
T d2epra1           5 QVACEICGKIFRDVYHLNRHKLSHSG--EKPY   34 (35)
T ss_dssp             SEEETTTTEEESSHHHHHHHGGGSCS--CCCC
T ss_pred             hhhHHHHHHHHHHHHHHHhhhcccCC--CCCC
Confidence            44566666666666666666666666  3565

>d1a1ia3 g.37.1.1 (A:160-187) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.74  E-value=8.1e-06  Score=41.89  Aligned_cols=26  Identities=38%  Similarity=0.667  Sum_probs=17.6

Q ss_pred             cccccccccccccCHHHHHHHHhhcC
Q psy8169         153 MKFECYVCSKVLATSHSLKRHLLIHN  178 (843)
Q Consensus       153 ~~~~C~~C~~~f~~~~~l~~H~~~h~  178 (843)
                      +||.|.+|++.|......++|.++|.
T Consensus         2 kPf~C~~CgrkFArsderkRH~kiH~   27 (28)
T d1a1ia3           2 KPFACDICGRKFARSDERKRHTKIHL   27 (28)
T ss_dssp             CCEECTTTCCEESSHHHHHHHHGGGC
T ss_pred             CCcccchhhhhhhcchhhhhhhhhcc
Confidence            56677777777777777777766663

>d2epqa1 g.37.1.1 (A:380-411) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.73  E-value=9e-06  Score=42.21  Aligned_cols=27  Identities=22%  Similarity=0.547  Sum_probs=17.8

Q ss_pred             cccccccccccccCHHHHHHHHhhcCC
Q psy8169         153 MKFECYVCSKVLATSHSLKRHLLIHNG  179 (843)
Q Consensus       153 ~~~~C~~C~~~f~~~~~l~~H~~~h~~  179 (843)
                      +||.|++|+..|+.+..+..|.+.|.|
T Consensus         2 kp~~cpic~qrfkrkdrmsyhvrshdg   28 (32)
T d2epqa1           2 KPYSCPVCGLRFKRKDRMSYHVRSHDG   28 (32)
T ss_dssp             CSSEETTTTEECSCHHHHHHHHHHHSC
T ss_pred             CCcccchHHHHhhccccceEeeecccC
Confidence            566666666666666666666666655

>d2glia5 g.37.1.1 (A:229-257) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.73  E-value=2.9e-06  Score=44.32  Aligned_cols=26  Identities=42%  Similarity=0.890  Sum_probs=24.2

Q ss_pred             chhhch--hhhhhhhhhhHHHHHhHhhc
Q psy8169         774 EILCKI--CNRTFTRNYNLKKHMKTVHK  799 (843)
Q Consensus       774 ~~~C~~--C~~~F~~~~~L~~H~~~~H~  799 (843)
                      +|.|.+  |+++++..+.|++||+.+|+
T Consensus         2 PY~Ck~~gC~K~YtdPSSLRKH~k~~HG   29 (29)
T d2glia5           2 PYVCKLPGCTKRYTDPSSLRKHVKTVHG   29 (29)
T ss_dssp             CEECCSTTTCCEESSHHHHHHHHHHSCC
T ss_pred             CeecccCCCCcccCCHHHHHHHHHhhCC
Confidence            388988  99999999999999999986

>d2epra1 g.37.1.1 (A:350-384) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.68  E-value=7.4e-06  Score=43.67  Aligned_cols=30  Identities=27%  Similarity=0.445  Sum_probs=28.2

Q ss_pred             eeecCcChhccCChHHHHHHHHHhcCCCce
Q psy8169         275 YLTCLICFKTFLTEVDLGKHMKMHMDDNQI  304 (843)
Q Consensus       275 ~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~  304 (843)
                      ...|..|++.|.+...|.+|...|++++||
T Consensus         5 ~~~ce~cgk~frdvyhlnrhklshs~ekpy   34 (35)
T d2epra1           5 QVACEICGKIFRDVYHLNRHKLSHSGEKPY   34 (35)
T ss_dssp             SEEETTTTEEESSHHHHHHHGGGSCSCCCC
T ss_pred             hhhHHHHHHHHHHHHHHHhhhcccCCCCCC
Confidence            367999999999999999999999999998

>d2dmda3 g.37.1.1 (A:62-90) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.68  E-value=1.2e-05  Score=40.67  Aligned_cols=27  Identities=33%  Similarity=0.616  Sum_probs=16.3

Q ss_pred             cccccccccccccCHHHHHHHHhhcCC
Q psy8169         153 MKFECYVCSKVLATSHSLKRHLLIHNG  179 (843)
Q Consensus       153 ~~~~C~~C~~~f~~~~~l~~H~~~h~~  179 (843)
                      +||+|..|++.-.+.+.|..|++.|+|
T Consensus         2 rpfkcqlcsy~srnssqltvhlr~htg   28 (29)
T d2dmda3           2 RPFKCQICPYASRNSSQLTVHLRSHTG   28 (29)
T ss_dssp             CCEECSSSSCEESSHHHHHHHHTTCCS
T ss_pred             CcceeeecccccCCchheEEeeecccC
Confidence            456666666666666666666666654

>d2epqa1 g.37.1.1 (A:380-411) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.68  E-value=1.3e-05  Score=41.65  Aligned_cols=27  Identities=22%  Similarity=0.565  Sum_probs=14.0

Q ss_pred             CccccccchhhcCCHHHHHHHHhhccC
Q psy8169          16 ENHMCELCYKVFESRENLMRHLKIHDD   42 (843)
Q Consensus        16 ~~~~C~~C~~~f~~~~~l~~H~~~h~~   42 (843)
                      +||.|++|+..|..+..+..|.+.|.+
T Consensus         2 kp~~cpic~qrfkrkdrmsyhvrshdg   28 (32)
T d2epqa1           2 KPYSCPVCGLRFKRKDRMSYHVRSHDG   28 (32)
T ss_dssp             CSSEETTTTEECSCHHHHHHHHHHHSC
T ss_pred             CCcccchHHHHhhccccceEeeecccC
Confidence            455555555555555555555555543

>d1ubdc2 g.37.1.1 (C:323-350) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.58  E-value=1.9e-05  Score=39.78  Aligned_cols=25  Identities=36%  Similarity=0.693  Sum_probs=18.9

Q ss_pred             cccccchhhcCCHHHHHHHHhhccC
Q psy8169          18 HMCELCYKVFESRENLMRHLKIHDD   42 (843)
Q Consensus        18 ~~C~~C~~~f~~~~~l~~H~~~h~~   42 (843)
                      +.|..||+.|...+.|.+|...|++
T Consensus         3 hvc~ecgkaf~essklkrh~lvhtg   27 (28)
T d1ubdc2           3 HVCAECGKAFVESSKLKRHQLVHTG   27 (28)
T ss_dssp             EECTTTCCEESSHHHHHHHGGGTSC
T ss_pred             chHHHHhHHHHHHHHHHHHhhcccC
Confidence            4677777777777777777777765

>d1klra_ g.37.1.1 (A:) ZFY {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZFY
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.54  E-value=2e-05  Score=40.46  Aligned_cols=29  Identities=24%  Similarity=0.548  Sum_probs=26.2

Q ss_pred             CCCCccccccccchhhhhhhhhccccCCC
Q psy8169         662 RIPCTLCDKTFTRKDSLKKHIRIFHTQNQ  690 (843)
Q Consensus       662 ~~~C~~C~~~f~~~~~L~~H~~~~H~~~~  690 (843)
                      +|.|.+|.+.....++|+.|+++.|..++
T Consensus         2 py~cqyc~yrsadssnlkthiktkhskek   30 (30)
T d1klra_           2 TYQCQYCEFRSADSSNLKTHIKTKHSKEK   30 (30)
T ss_dssp             CCCCSSSSCCCSCSHHHHHHHHHHTSSCC
T ss_pred             CccccccccccccchhhhhhhhcccccCC
Confidence            39999999999999999999999887653

>d1bboa1 g.37.1.1 (A:1-28) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.51  E-value=4.3e-05  Score=39.07  Aligned_cols=27  Identities=26%  Similarity=0.308  Sum_probs=22.0

Q ss_pred             eecCcChhccCChHHHHHHHHHhcCCC
Q psy8169         276 LTCLICFKTFLTEVDLGKHMKMHMDDN  302 (843)
Q Consensus       276 ~~C~~C~~~f~~~~~L~~H~~~H~~~~  302 (843)
                      |.|++|+......+.|+.|++.|++++
T Consensus         2 YvC~~Cg~~C~KPSvL~KHIRsHT~~R   28 (28)
T d1bboa1           2 YICEECGIRAKKPSMLKKHIRTHTDVR   28 (28)
T ss_dssp             CBCTTTCCBCSSHHHHHHHHHHTSSCC
T ss_pred             ccccccCcccCCHHHHHHHHHHhcCCC
Confidence            778888888888888888888888753

>d1bboa1 g.37.1.1 (A:1-28) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.49  E-value=2.5e-05  Score=39.94  Aligned_cols=27  Identities=37%  Similarity=0.578  Sum_probs=25.3

Q ss_pred             CCCccccccccchhhhhhhhhccccCCC
Q psy8169         663 IPCTLCDKTFTRKDSLKKHIRIFHTQNQ  690 (843)
Q Consensus       663 ~~C~~C~~~f~~~~~L~~H~~~~H~~~~  690 (843)
                      |.|++||......+-|+.|++. |++++
T Consensus         2 YvC~~Cg~~C~KPSvL~KHIRs-HT~~R   28 (28)
T d1bboa1           2 YICEECGIRAKKPSMLKKHIRT-HTDVR   28 (28)
T ss_dssp             CBCTTTCCBCSSHHHHHHHHHH-TSSCC
T ss_pred             ccccccCcccCCHHHHHHHHHH-hcCCC
Confidence            8999999999999999999999 98864

>d2glia5 g.37.1.1 (A:229-257) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.48  E-value=1.1e-05  Score=42.09  Aligned_cols=26  Identities=42%  Similarity=0.839  Sum_probs=24.0

Q ss_pred             cccccc--hhhhhhhHHHHhhhhhhhcC
Q psy8169         712 RIRCEL--CDKSFTRKDSLKKHNRIFHG  737 (843)
Q Consensus       712 ~~~C~~--C~~~f~~~~~L~~H~~~~H~  737 (843)
                      +|.|.+  |+++++..++|+.|++.+||
T Consensus         2 PY~Ck~~gC~K~YtdPSSLRKH~k~~HG   29 (29)
T d2glia5           2 PYVCKLPGCTKRYTDPSSLRKHVKTVHG   29 (29)
T ss_dssp             CEECCSTTTCCEESSHHHHHHHHHHSCC
T ss_pred             CeecccCCCCcccCCHHHHHHHHHhhCC
Confidence            489998  99999999999999999886

>d2dmda1 g.37.1.1 (A:34-61) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.48  E-value=3.6e-05  Score=38.62  Aligned_cols=26  Identities=38%  Similarity=0.709  Sum_probs=17.3

Q ss_pred             cccccccccccccCHHHHHHHHhhcC
Q psy8169         153 MKFECYVCSKVLATSHSLKRHLLIHN  178 (843)
Q Consensus       153 ~~~~C~~C~~~f~~~~~l~~H~~~h~  178 (843)
                      +||+|..|.+.-...++|..|+++|.
T Consensus         2 kp~kck~cdyaaadsssl~kh~rihs   27 (28)
T d2dmda1           2 KPYKCKTCDYAAADSSSLNKHLRIHS   27 (28)
T ss_dssp             CSEECSSSCCEESSHHHHHHHHHHSC
T ss_pred             CCcccccccchhcchhhHhhhhhccc
Confidence            46666666666666666666666664

>d2dmda1 g.37.1.1 (A:34-61) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.45  E-value=3.9e-05  Score=38.53  Aligned_cols=25  Identities=28%  Similarity=0.549  Sum_probs=12.4

Q ss_pred             CccccccchhhcCCHHHHHHHHhhc
Q psy8169          16 ENHMCELCYKVFESRENLMRHLKIH   40 (843)
Q Consensus        16 ~~~~C~~C~~~f~~~~~l~~H~~~h   40 (843)
                      +||+|..|+......++|..|+++|
T Consensus         2 kp~kck~cdyaaadsssl~kh~rih   26 (28)
T d2dmda1           2 KPYKCKTCDYAAADSSSLNKHLRIH   26 (28)
T ss_dssp             CSEECSSSCCEESSHHHHHHHHHHS
T ss_pred             CCcccccccchhcchhhHhhhhhcc
Confidence            3445555555444455555555444

>d1klra_ g.37.1.1 (A:) ZFY {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZFY
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.44  E-value=4.2e-05  Score=39.24  Aligned_cols=29  Identities=24%  Similarity=0.600  Sum_probs=21.0

Q ss_pred             CcccccccccccCCHHHHHHhHHhhccCC
Q psy8169          46 KRFKCEQCDKRFSSNAELNKHSSAIHQRL   74 (843)
Q Consensus        46 ~~~~C~~C~~~f~~~~~l~~H~~~~h~~~   74 (843)
                      +||.|..|.+.....++|..|+.+.|..+
T Consensus         1 kpy~cqyc~yrsadssnlkthiktkhske   29 (30)
T d1klra_           1 KTYQCQYCEFRSADSSNLKTHIKTKHSKE   29 (30)
T ss_dssp             CCCCCSSSSCCCSCSHHHHHHHHHHTSSC
T ss_pred             CCccccccccccccchhhhhhhhcccccC
Confidence            47777777777777777777776666544

>d1x5wa2 g.37.1.1 (A:36-64) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.35  E-value=5.4e-05  Score=38.80  Aligned_cols=27  Identities=33%  Similarity=0.599  Sum_probs=25.5

Q ss_pred             CCcccccccccccchHHHHHHHHHhhc
Q psy8169         563 SRIPCELCYKTFTRKDSLRKHMKIFHT  589 (843)
Q Consensus       563 ~~~~C~~C~~~f~~~~~L~~H~~~~H~  589 (843)
                      +||+|.+|.+-..+.++|..|++..|+
T Consensus         1 rPFkC~~CsFDtkq~SnL~kH~kk~H~   27 (29)
T d1x5wa2           1 RPFKCNYCSFDTKQPSNLSKHMKKFHG   27 (29)
T ss_dssp             CSEECSSSSCEESSHHHHHHHHHHHHS
T ss_pred             CCcccceecccccCcchHHHHHHHHcc
Confidence            589999999999999999999999886

>d2dlqa4 g.37.1.1 (A:8-34) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.29  E-value=0.0001  Score=36.45  Aligned_cols=26  Identities=31%  Similarity=0.620  Sum_probs=20.5

Q ss_pred             ecCcChhccCChHHHHHHHHHhcCCC
Q psy8169         277 TCLICFKTFLTEVDLGKHMKMHMDDN  302 (843)
Q Consensus       277 ~C~~C~~~f~~~~~L~~H~~~H~~~~  302 (843)
                      +|+.|.++|.++..|..|-+.|+|++
T Consensus         2 qcp~c~k~f~skyylkvhnr~htgek   27 (27)
T d2dlqa4           2 ECPTCHKKFLSKYYLKVHNRKHTGEK   27 (27)
T ss_dssp             CCTTTCCCCSSHHHHHHHHHHHSSCC
T ss_pred             cCcchHHHHHHhHhhhhccccccCCC
Confidence            57888888888888888888887764

>d1bboa2 g.37.1.1 (A:29-57) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.28  E-value=5.9e-05  Score=38.49  Aligned_cols=23  Identities=22%  Similarity=0.535  Sum_probs=17.4

Q ss_pred             ccccccccccccCHHHHHHHHhh
Q psy8169         154 KFECYVCSKVLATSHSLKRHLLI  176 (843)
Q Consensus       154 ~~~C~~C~~~f~~~~~l~~H~~~  176 (843)
                      ||.|..|++.|+++.+|..||+.
T Consensus         1 py~C~~CnF~FKTKGNLTKHmkS   23 (29)
T d1bboa2           1 PYHCTYCNFSFKTKGNLTKHMKS   23 (29)
T ss_dssp             CEECSSSSCEESSHHHHHHHHHS
T ss_pred             CcccceeeeeEeeccchhHhhhh
Confidence            57777788888777777777764

>d2dlqa4 g.37.1.1 (A:8-34) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.28  E-value=7.5e-05  Score=36.97  Aligned_cols=25  Identities=32%  Similarity=0.468  Sum_probs=20.3

Q ss_pred             ccccchhhcCCHHHHHHHHhhccCC
Q psy8169          19 MCELCYKVFESRENLMRHLKIHDDK   43 (843)
Q Consensus        19 ~C~~C~~~f~~~~~l~~H~~~h~~~   43 (843)
                      .|+.|.++|.++..|..|-+.|+++
T Consensus         2 qcp~c~k~f~skyylkvhnr~htge   26 (27)
T d2dlqa4           2 ECPTCHKKFLSKYYLKVHNRKHTGE   26 (27)
T ss_dssp             CCTTTCCCCSSHHHHHHHHHHHSSC
T ss_pred             cCcchHHHHHHhHhhhhccccccCC
Confidence            5888888888888888888888774

>d1ubdc2 g.37.1.1 (C:323-350) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.28  E-value=8.6e-05  Score=37.41  Aligned_cols=25  Identities=44%  Similarity=0.816  Sum_probs=17.4

Q ss_pred             cccccccccccCHHHHHHHHhhcCC
Q psy8169         155 FECYVCSKVLATSHSLKRHLLIHNG  179 (843)
Q Consensus       155 ~~C~~C~~~f~~~~~l~~H~~~h~~  179 (843)
                      ..|..|++.|...+.|++|..+|+|
T Consensus         3 hvc~ecgkaf~essklkrh~lvhtg   27 (28)
T d1ubdc2           3 HVCAECGKAFVESSKLKRHQLVHTG   27 (28)
T ss_dssp             EECTTTCCEESSHHHHHHHGGGTSC
T ss_pred             chHHHHhHHHHHHHHHHHHhhcccC
Confidence            3577777777777777777777765

>d1bboa2 g.37.1.1 (A:29-57) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.27  E-value=5e-05  Score=38.76  Aligned_cols=21  Identities=29%  Similarity=0.759  Sum_probs=10.3

Q ss_pred             cccccccccccCCHHHHHHhH
Q psy8169          47 RFKCEQCDKRFSSNAELNKHS   67 (843)
Q Consensus        47 ~~~C~~C~~~f~~~~~l~~H~   67 (843)
                      ||.|..|+..|.++.+|..||
T Consensus         1 py~C~~CnF~FKTKGNLTKHm   21 (29)
T d1bboa2           1 PYHCTYCNFSFKTKGNLTKHM   21 (29)
T ss_dssp             CEECSSSSCEESSHHHHHHHH
T ss_pred             CcccceeeeeEeeccchhHhh
Confidence            344455555555555555544

>d1x5wa2 g.37.1.1 (A:36-64) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.18  E-value=4.4e-05  Score=39.11  Aligned_cols=27  Identities=33%  Similarity=0.516  Sum_probs=25.2

Q ss_pred             chhhchhhhhhhhhhhHHHHHhHhhcc
Q psy8169         774 EILCKICNRTFTRNYNLKKHMKTVHKI  800 (843)
Q Consensus       774 ~~~C~~C~~~F~~~~~L~~H~~~~H~~  800 (843)
                      +|+|.+|...-...++|..|++..|++
T Consensus         2 PFkC~~CsFDtkq~SnL~kH~kk~H~D   28 (29)
T d1x5wa2           2 PFKCNYCSFDTKQPSNLSKHMKKFHGD   28 (29)
T ss_dssp             SEECSSSSCEESSHHHHHHHHHHHHSS
T ss_pred             CcccceecccccCcchHHHHHHHHccC
Confidence            499999999999999999999999984

>d2dlqa3 g.37.1.1 (A:63-92) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.18  E-value=0.00012  Score=37.22  Aligned_cols=28  Identities=25%  Similarity=0.521  Sum_probs=20.4

Q ss_pred             CCccccccchhhcCCHHHHHHHHhhccC
Q psy8169          15 VENHMCELCYKVFESRENLMRHLKIHDD   42 (843)
Q Consensus        15 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~   42 (843)
                      +..|.|..|..+|..+-.|..||..|+|
T Consensus         2 eqvftcs~cqe~f~rrmelr~hmvshtg   29 (30)
T d2dlqa3           2 EQVFTCSVCQETFRRRMELRLHMVSHTG   29 (30)
T ss_dssp             CCCEECSSSCCEESSHHHHHHHHHHHSS
T ss_pred             cceEEeHHHHHHHHHHHhheeeeecccC
Confidence            4567777777777777777777777765

>d1znfa_ g.37.1.1 (A:) XFIN, third domain {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: XFIN, third domain
species: Xenopus laevis [TaxId: 8355]

Probab=97.16  E-value=0.00014  Score=35.35  Aligned_cols=24  Identities=33%  Similarity=0.743  Sum_probs=17.7

Q ss_pred             cccccchhhcCCHHHHHHHHhhcc
Q psy8169          18 HMCELCYKVFESRENLMRHLKIHD   41 (843)
Q Consensus        18 ~~C~~C~~~f~~~~~l~~H~~~h~   41 (843)
                      |+|..|.++|..+++|.+|++.|.
T Consensus         1 ykcglcersfveksalsrhqrvhk   24 (26)
T d1znfa_           1 YKCGLCERSFVEKSALSRHQRVHK   24 (26)
T ss_dssp             CBCSSSCCBCSSHHHHHHHGGGTC
T ss_pred             CcccchHHHHHHHHHHHHHHHhhc
Confidence            567777777777777777777763

>d1njqa_ g.37.1.3 (A:) SUPERMAN zinc finger domain {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Plant C2H2 finger (QALGGH zinc finger)
domain: SUPERMAN zinc finger domain
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=97.09  E-value=0.00016  Score=41.22  Aligned_cols=27  Identities=26%  Similarity=0.623  Sum_probs=20.0

Q ss_pred             CccccccchhhcCCHHHHHHHHhhccC
Q psy8169          16 ENHMCELCYKVFESRENLMRHLKIHDD   42 (843)
Q Consensus        16 ~~~~C~~C~~~f~~~~~l~~H~~~h~~   42 (843)
                      +.|.|.+|++.|.+-.+|--||+.|..
T Consensus         4 r~~~C~~C~k~F~s~qALGGH~~~Hr~   30 (37)
T d1njqa_           4 RSYTCSFCKREFRSAQALGGHMNVHRR   30 (37)
T ss_dssp             SSEECTTTCCEESSHHHHHHHHHTTCC
T ss_pred             CccCCCCCCCccCCcccccchHhhhcc
Confidence            457777777777777777777777754

>d1znfa_ g.37.1.1 (A:) XFIN, third domain {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: XFIN, third domain
species: Xenopus laevis [TaxId: 8355]

Probab=97.04  E-value=0.00024  Score=34.51  Aligned_cols=20  Identities=25%  Similarity=0.664  Sum_probs=7.9

Q ss_pred             cccccccccCHHHHHHHHhh
Q psy8169         157 CYVCSKVLATSHSLKRHLLI  176 (843)
Q Consensus       157 C~~C~~~f~~~~~l~~H~~~  176 (843)
                      |..|.+.|..++.|.+|++.
T Consensus         3 cglcersfveksalsrhqrv   22 (26)
T d1znfa_           3 CGLCERSFVEKSALSRHQRV   22 (26)
T ss_dssp             CSSSCCBCSSHHHHHHHGGG
T ss_pred             ccchHHHHHHHHHHHHHHHh
Confidence            33344444333444443333

>d2adra2 g.37.1.1 (A:131-161) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=97.04  E-value=0.0001  Score=38.80  Aligned_cols=27  Identities=41%  Similarity=0.865  Sum_probs=24.7

Q ss_pred             CcccccccccccchHHHHHHHHHhhcc
Q psy8169         564 RIPCELCYKTFTRKDSLRKHMKIFHTR  590 (843)
Q Consensus       564 ~~~C~~C~~~f~~~~~L~~H~~~~H~~  590 (843)
                      ||.|.+|++.|.++..|.+|.+..|.+
T Consensus         1 Pf~C~~C~R~FaRrDLlLRH~qKlH~g   27 (31)
T d2adra2           1 PYPCGLCNRAFTRRDLLIRHAQKIHSG   27 (31)
T ss_dssp             SEECTTTCCEESSHHHHHHHHTTTSCC
T ss_pred             CcccccccchhhHHHHHHHHHHHHhcC
Confidence            799999999999999999999887763

>d2dlqa3 g.37.1.1 (A:63-92) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.01  E-value=0.0003  Score=35.75  Aligned_cols=26  Identities=35%  Similarity=0.659  Sum_probs=15.6

Q ss_pred             eeecCcChhccCChHHHHHHHHHhcC
Q psy8169         275 YLTCLICFKTFLTEVDLGKHMKMHMD  300 (843)
Q Consensus       275 ~~~C~~C~~~f~~~~~L~~H~~~H~~  300 (843)
                      .|.|..|...|.....|+.||-.|+|
T Consensus         4 vftcs~cqe~f~rrmelr~hmvshtg   29 (30)
T d2dlqa3           4 VFTCSVCQETFRRRMELRLHMVSHTG   29 (30)
T ss_dssp             CEECSSSCCEESSHHHHHHHHHHHSS
T ss_pred             eEEeHHHHHHHHHHHhheeeeecccC
Confidence            45566666666666666666666554

>d2adra2 g.37.1.1 (A:131-161) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=96.93  E-value=0.00023  Score=37.50  Aligned_cols=27  Identities=26%  Similarity=0.630  Sum_probs=25.1

Q ss_pred             ceecccccccccChHHHHHHHHhhccC
Q psy8169         446 IIQCHICLKTFAKKDSLKKHMKVFHTY  472 (843)
Q Consensus       446 ~~~C~~C~~~f~~~~~L~~H~~~~H~~  472 (843)
                      ||.|.+|++.|+.+..|.+|.+..|.+
T Consensus         1 Pf~C~~C~R~FaRrDLlLRH~qKlH~g   27 (31)
T d2adra2           1 PYPCGLCNRAFTRRDLLIRHAQKIHSG   27 (31)
T ss_dssp             SEECTTTCCEESSHHHHHHHHTTTSCC
T ss_pred             CcccccccchhhHHHHHHHHHHHHhcC
Confidence            589999999999999999999988875

>d2dlqa1 g.37.1.1 (A:93-118) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.87  E-value=0.0003  Score=34.12  Aligned_cols=23  Identities=26%  Similarity=0.730  Sum_probs=14.6

Q ss_pred             cccccccccccCCHHHHHHhHHh
Q psy8169          47 RFKCEQCDKRFSSNAELNKHSSA   69 (843)
Q Consensus        47 ~~~C~~C~~~f~~~~~l~~H~~~   69 (843)
                      ||+|.-|...|..+..|..|+..
T Consensus         2 pykcsscsqqfmqkkdlqshmik   24 (26)
T d2dlqa1           2 PYKCSSCSQQFMQKKDLQSHMIK   24 (26)
T ss_dssp             SEECSSSCCEESSHHHHHHHHHH
T ss_pred             CCcccHHHHHHHHHHHHHHHHHh
Confidence            56666666666666666666644

>d2csha2 g.37.1.1 (A:61-104) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.78  E-value=0.00033  Score=39.76  Aligned_cols=24  Identities=29%  Similarity=0.613  Sum_probs=12.7

Q ss_pred             CCCccccccchhhcCCHHHHHHHH
Q psy8169          14 YVENHMCELCYKVFESRENLMRHL   37 (843)
Q Consensus        14 ~~~~~~C~~C~~~f~~~~~l~~H~   37 (843)
                      |.+||.|.+|++.|-.+-++.+|.
T Consensus         2 GiKPYeC~~C~KrFMWRDSF~RH~   25 (44)
T d2csha2           2 GIKPYECNICAKRFMWRDSFHRHV   25 (44)
T ss_dssp             CCCCEECSSSCCEESCHHHHHHHH
T ss_pred             CCCceeccchhhhhhhHHHHHHhh
Confidence            445555555555555555555554

>d2j7ja2 g.37.1.1 (A:29-57) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=96.64  E-value=0.00064  Score=34.53  Aligned_cols=25  Identities=36%  Similarity=0.567  Sum_probs=19.3

Q ss_pred             Cceeccc--cchhcCChhhHHHHHHHc
Q psy8169         302 NQIQCRF--CNKYFSRNYNLKQHMKTC  326 (843)
Q Consensus       302 ~~~~C~~--C~~~f~~~~~L~~H~~~h  326 (843)
                      .||+|+.  |++.|...+.|++|.++|
T Consensus         2 ~py~c~hegcdk~fs~ps~lkrhekvh   28 (29)
T d2j7ja2           2 LPYECPHEGCDKRFSLPSRLKRHEKVH   28 (29)
T ss_dssp             CCEECCSTTCCCEESSHHHHHHHHHHH
T ss_pred             CCccCCccCccccccCHHHHhhhhhcc
Confidence            4677776  888888888888887765

>d1njqa_ g.37.1.3 (A:) SUPERMAN zinc finger domain {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Plant C2H2 finger (QALGGH zinc finger)
domain: SUPERMAN zinc finger domain
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=96.56  E-value=0.00041  Score=39.49  Aligned_cols=29  Identities=21%  Similarity=0.706  Sum_probs=25.4

Q ss_pred             CCCCCccccccccchhhhhhhhhccccCCC
Q psy8169         661 DRIPCTLCDKTFTRKDSLKKHIRIFHTQNQ  690 (843)
Q Consensus       661 ~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~  690 (843)
                      ..|.|.+|++.|.+-.+|--|++. |..++
T Consensus         4 r~~~C~~C~k~F~s~qALGGH~~~-Hr~~r   32 (37)
T d1njqa_           4 RSYTCSFCKREFRSAQALGGHMNV-HRRDR   32 (37)
T ss_dssp             SSEECTTTCCEESSHHHHHHHHHT-TCCSC
T ss_pred             CccCCCCCCCccCCcccccchHhh-hcchH
Confidence            349999999999999999999988 76554

>d2j7ja2 g.37.1.1 (A:29-57) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=96.53  E-value=0.00072  Score=34.35  Aligned_cols=24  Identities=38%  Similarity=0.717  Sum_probs=11.9

Q ss_pred             cccccc--ccccccCHHHHHHHHhhc
Q psy8169         154 KFECYV--CSKVLATSHSLKRHLLIH  177 (843)
Q Consensus       154 ~~~C~~--C~~~f~~~~~l~~H~~~h  177 (843)
                      ||.|++  |++.|...+.|++|-++|
T Consensus         3 py~c~hegcdk~fs~ps~lkrhekvh   28 (29)
T d2j7ja2           3 PYECPHEGCDKRFSLPSRLKRHEKVH   28 (29)
T ss_dssp             CEECCSTTCCCEESSHHHHHHHHHHH
T ss_pred             CccCCccCccccccCHHHHhhhhhcc
Confidence            444544  555555555555554443

>d2csha2 g.37.1.1 (A:61-104) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.48  E-value=0.00066  Score=38.52  Aligned_cols=25  Identities=28%  Similarity=0.618  Sum_probs=23.0

Q ss_pred             CCCCcccccccccccchHHHHHHHH
Q psy8169         561 IKSRIPCELCYKTFTRKDSLRKHMK  585 (843)
Q Consensus       561 ~~~~~~C~~C~~~f~~~~~L~~H~~  585 (843)
                      +.+||.|..|++.|..+.++.+|..
T Consensus         2 GiKPYeC~~C~KrFMWRDSF~RH~~   26 (44)
T d2csha2           2 GIKPYECNICAKRFMWRDSFHRHVT   26 (44)
T ss_dssp             CCCCEECSSSCCEESCHHHHHHHHH
T ss_pred             CCCceeccchhhhhhhHHHHHHhhh
Confidence            4789999999999999999999964

>d2dlqa1 g.37.1.1 (A:93-118) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.37  E-value=0.00093  Score=32.40  Aligned_cols=24  Identities=29%  Similarity=0.706  Sum_probs=17.7

Q ss_pred             ccccCcccccccchhhHHHhhhhc
Q psy8169         212 QLKCEFCGKVFLKKSNLKAHIENN  235 (843)
Q Consensus       212 ~~~C~~C~~~f~~~~~l~~H~~~~  235 (843)
                      ||+|..|...|..+..|..|+.+.
T Consensus         2 pykcsscsqqfmqkkdlqshmikl   25 (26)
T d2dlqa1           2 PYKCSSCSQQFMQKKDLQSHMIKL   25 (26)
T ss_dssp             SEECSSSCCEESSHHHHHHHHHHT
T ss_pred             CCcccHHHHHHHHHHHHHHHHHhc
Confidence            577788888888877777777443

>d2drpa2 g.37.1.1 (A:140-165) Tramtrack protein (two zinc-finger peptide) {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Tramtrack protein (two zinc-finger peptide)
species: Drosophila melanogaster [TaxId: 7227]

Probab=96.33  E-value=0.00048  Score=33.58  Aligned_cols=25  Identities=40%  Similarity=0.812  Sum_probs=23.3

Q ss_pred             hhhchhhhhhhhhhhHHHHHhHhhc
Q psy8169         775 ILCKICNRTFTRNYNLKKHMKTVHK  799 (843)
Q Consensus       775 ~~C~~C~~~F~~~~~L~~H~~~~H~  799 (843)
                      |.|++|-+.|+++.++..|.+..|.
T Consensus         2 ypcp~cfkeftrkdnm~ahvkiihk   26 (26)
T d2drpa2           2 YPCPFCFKEFTRKDNMTAHVKIIHK   26 (26)
T ss_dssp             EECTTTCCEESCHHHHHHHHHHHTC
T ss_pred             cCCchhhHHhccccCceEEEEEecC
Confidence            7799999999999999999998874

>d2ct1a1 g.37.1.1 (A:44-71) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.22  E-value=0.00054  Score=34.34  Aligned_cols=25  Identities=24%  Similarity=0.615  Sum_probs=23.8

Q ss_pred             hhhchhhhhhhhhhhHHHHHhHhhc
Q psy8169         775 ILCKICNRTFTRNYNLKKHMKTVHK  799 (843)
Q Consensus       775 ~~C~~C~~~F~~~~~L~~H~~~~H~  799 (843)
                      |+|+.|+-...+++.|+.|++.-|.
T Consensus         3 ~qcphc~tiiarksdlrvhlrnlhs   27 (28)
T d2ct1a1           3 FHCPHCDTVIARKSDLGVHLRKQHS   27 (28)
T ss_dssp             EECSSSSCEESSHHHHHHHHHHTSC
T ss_pred             ccCCcchhheeehhhhhHHhhhccc
Confidence            8999999999999999999999885

>d1x5wa1 g.37.1.1 (A:8-35) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.04  E-value=0.00073  Score=34.01  Aligned_cols=24  Identities=33%  Similarity=0.616  Sum_probs=22.1

Q ss_pred             ccccchhhhhhhHHHHhhhhhhhc
Q psy8169         713 IRCELCDKSFTRKDSLKKHNRIFH  736 (843)
Q Consensus       713 ~~C~~C~~~f~~~~~L~~H~~~~H  736 (843)
                      -+|+.|.++..++..|+.|.|+|-
T Consensus         3 ekc~ecsyscsskaalrvh~rihc   26 (28)
T d1x5wa1           3 EKCSECSYSCSSKAALRIHERIHC   26 (28)
T ss_dssp             EECSSSSCEESSHHHHHHHHGGGC
T ss_pred             ccCcccccccCcHHHHHHhhcccc
Confidence            689999999999999999999853

>d2drpa2 g.37.1.1 (A:140-165) Tramtrack protein (two zinc-finger peptide) {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Tramtrack protein (two zinc-finger peptide)
species: Drosophila melanogaster [TaxId: 7227]

Probab=95.92  E-value=0.0022  Score=31.24  Aligned_cols=24  Identities=54%  Similarity=1.201  Sum_probs=22.3

Q ss_pred             cccccccccccchHHHHHHHHHhh
Q psy8169         565 IPCELCYKTFTRKDSLRKHMKIFH  588 (843)
Q Consensus       565 ~~C~~C~~~f~~~~~L~~H~~~~H  588 (843)
                      |.|++|-+.|.++.++..|.++.|
T Consensus         2 ypcp~cfkeftrkdnm~ahvkiih   25 (26)
T d2drpa2           2 YPCPFCFKEFTRKDNMTAHVKIIH   25 (26)
T ss_dssp             EECTTTCCEESCHHHHHHHHHHHT
T ss_pred             cCCchhhHHhccccCceEEEEEec
Confidence            689999999999999999999865

>d1x5wa1 g.37.1.1 (A:8-35) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.86  E-value=0.0024  Score=32.12  Aligned_cols=24  Identities=29%  Similarity=0.463  Sum_probs=15.7

Q ss_pred             ccccccchhhcCCHHHHHHHHhhc
Q psy8169          17 NHMCELCYKVFESRENLMRHLKIH   40 (843)
Q Consensus        17 ~~~C~~C~~~f~~~~~l~~H~~~h   40 (843)
                      |-+|+.|..+..++.+|+.|-++|
T Consensus         2 pekc~ecsyscsskaalrvh~rih   25 (28)
T d1x5wa1           2 PEKCSECSYSCSSKAALRIHERIH   25 (28)
T ss_dssp             SEECSSSSCEESSHHHHHHHHGGG
T ss_pred             CccCcccccccCcHHHHHHhhccc
Confidence            345666666666666666666665

>d1tf3a2 g.37.1.1 (A:41-70) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=95.70  E-value=0.0034  Score=31.98  Aligned_cols=27  Identities=30%  Similarity=0.474  Sum_probs=16.3

Q ss_pred             Cceeccc--cchhcCChhhHHHHHHHccC
Q psy8169         302 NQIQCRF--CNKYFSRNYNLKQHMKTCTK  328 (843)
Q Consensus       302 ~~~~C~~--C~~~f~~~~~L~~H~~~h~~  328 (843)
                      +||.|..  |.+.|.+...|.+|..+|++
T Consensus         1 ~pfpc~~egc~kgf~tlhhltrhs~thtg   29 (30)
T d1tf3a2           1 KPFPCKEEGCEKGFTSLHHLTRHSLTHTG   29 (30)
T ss_dssp             CSEECCCSSCCCEESSTTHHHHHHHHHHT
T ss_pred             CCcCcccccccccchhhhhhhhhhccccC
Confidence            3566655  66666666666666666554

>d2dlqa2 g.37.1.1 (A:35-62) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=95.48  E-value=0.0041  Score=31.01  Aligned_cols=23  Identities=30%  Similarity=0.541  Sum_probs=20.8

Q ss_pred             CcccccccccccchHHHHHHHHH
Q psy8169         564 RIPCELCYKTFTRKDSLRKHMKI  586 (843)
Q Consensus       564 ~~~C~~C~~~f~~~~~L~~H~~~  586 (843)
                      ||.|..||+.+.++.+|..|...
T Consensus         1 pf~c~kcgkcyfrkenllehear   23 (28)
T d2dlqa2           1 PFECPKCGKCYFRKENLLEHEAR   23 (28)
T ss_dssp             SCBCTTTCCBCSSHHHHHHHHHH
T ss_pred             CCccccchhhhhhHhHHHHHHHH
Confidence            79999999999999999999653

>d2ct1a1 g.37.1.1 (A:44-71) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.41  E-value=0.0059  Score=30.58  Aligned_cols=26  Identities=27%  Similarity=0.540  Sum_probs=23.8

Q ss_pred             ceecccccccccChHHHHHHHHhhcc
Q psy8169         446 IIQCHICLKTFAKKDSLKKHMKVFHT  471 (843)
Q Consensus       446 ~~~C~~C~~~f~~~~~L~~H~~~~H~  471 (843)
                      .|+|+.|+-....+++|+.|++..|.
T Consensus         2 k~qcphc~tiiarksdlrvhlrnlhs   27 (28)
T d2ct1a1           2 KFHCPHCDTVIARKSDLGVHLRKQHS   27 (28)
T ss_dssp             SEECSSSSCEESSHHHHHHHHHHTSC
T ss_pred             CccCCcchhheeehhhhhHHhhhccc
Confidence            48999999999999999999998774

>d2dlqa2 g.37.1.1 (A:35-62) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=95.39  E-value=0.0049  Score=30.73  Aligned_cols=22  Identities=36%  Similarity=0.777  Sum_probs=20.4

Q ss_pred             ccccccccccCChHHHHHHHhh
Q psy8169         506 IQCRICSKTFTRKDSLRKHMRR  527 (843)
Q Consensus       506 ~~C~~C~~~f~~~~~L~~H~~~  527 (843)
                      |.|..||+.+-++.+|..|-.+
T Consensus         2 f~c~kcgkcyfrkenllehear   23 (28)
T d2dlqa2           2 FECPKCGKCYFRKENLLEHEAR   23 (28)
T ss_dssp             CBCTTTCCBCSSHHHHHHHHHH
T ss_pred             CccccchhhhhhHhHHHHHHHH
Confidence            8999999999999999999764

>d1tf3a2 g.37.1.1 (A:41-70) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=95.30  E-value=0.0028  Score=32.31  Aligned_cols=26  Identities=42%  Similarity=0.795  Sum_probs=15.4

Q ss_pred             cccccc--ccccccCHHHHHHHHhhcCC
Q psy8169         154 KFECYV--CSKVLATSHSLKRHLLIHNG  179 (843)
Q Consensus       154 ~~~C~~--C~~~f~~~~~l~~H~~~h~~  179 (843)
                      ||.|..  |.+.|.+...|.+|..+|.|
T Consensus         2 pfpc~~egc~kgf~tlhhltrhs~thtg   29 (30)
T d1tf3a2           2 PFPCKEEGCEKGFTSLHHLTRHSLTHTG   29 (30)
T ss_dssp             SEECCCSSCCCEESSTTHHHHHHHHHHT
T ss_pred             CcCcccccccccchhhhhhhhhhccccC
Confidence            455543  66666666666666666554

>d1bhia_ g.37.1.1 (A:) Transactivation domain of cre-bp1/atf-2 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transactivation domain of cre-bp1/atf-2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.21  E-value=0.007  Score=33.97  Aligned_cols=28  Identities=25%  Similarity=0.526  Sum_probs=20.1

Q ss_pred             CCCceeccc--cchhcCChhhHHHHHHHcc
Q psy8169         300 DDNQIQCRF--CNKYFSRNYNLKQHMKTCT  327 (843)
Q Consensus       300 ~~~~~~C~~--C~~~f~~~~~L~~H~~~h~  327 (843)
                      +++||.|..  |+.+|.+...|..|.+.|.
T Consensus         3 ddkPF~C~~pGC~q~F~neDhL~vHk~KH~   32 (38)
T d1bhia_           3 DDKPFLCTAPGCGQRFTNEDHLAVHKHKHE   32 (38)
T ss_dssp             TCCCEECCCTTTCCEESSHHHHHHHHHHHH
T ss_pred             CCCceecCCCCccccccchHHHHHhhhhhe
Confidence            467777744  7777777777777777764

>d2glia4 g.37.1.1 (A:198-228) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.11  E-value=0.0037  Score=32.86  Aligned_cols=25  Identities=32%  Similarity=0.648  Sum_probs=22.1

Q ss_pred             CCCcc--ccccccchhhhhhhh-hccccC
Q psy8169         663 IPCTL--CDKTFTRKDSLKKHI-RIFHTQ  688 (843)
Q Consensus       663 ~~C~~--C~~~f~~~~~L~~H~-~~~H~~  688 (843)
                      |.|++  |.+.|.+.++-..|+ |+ |..
T Consensus         3 Y~C~~~gC~KafsNsSDraKHqnRT-Hs~   30 (31)
T d2glia4           3 YMCEHEGCSKAFSNASDRAKHQNRT-HSN   30 (31)
T ss_dssp             EECCSTTCCCEESSSSTTHHHHHHT-TCS
T ss_pred             ccccCCChhhhhcchhhhhhhcccc-ccC
Confidence            99988  999999999999998 66 754

>d2glia4 g.37.1.1 (A:198-228) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.93  E-value=0.0034  Score=33.01  Aligned_cols=25  Identities=36%  Similarity=0.798  Sum_probs=11.9

Q ss_pred             cccccc--cccccCCHHHHHHhHHhhc
Q psy8169          47 RFKCEQ--CDKRFSSNAELNKHSSAIH   71 (843)
Q Consensus        47 ~~~C~~--C~~~f~~~~~l~~H~~~~h   71 (843)
                      ||.|.+  |.+.|+..+.-..|+.+.|
T Consensus         2 PY~C~~~gC~KafsNsSDraKHqnRTH   28 (31)
T d2glia4           2 PYMCEHEGCSKAFSNASDRAKHQNRTH   28 (31)
T ss_dssp             CEECCSTTCCCEESSSSTTHHHHHHTT
T ss_pred             CccccCCChhhhhcchhhhhhhccccc
Confidence            455544  5555555555555543333

>d1x6ha1 g.37.1.1 (A:44-80) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.71  E-value=0.0081  Score=32.23  Aligned_cols=22  Identities=36%  Similarity=0.865  Sum_probs=20.5

Q ss_pred             ccccccccccCChHHHHHHHhh
Q psy8169         506 IQCRICSKTFTRKDSLRKHMRR  527 (843)
Q Consensus       506 ~~C~~C~~~f~~~~~L~~H~~~  527 (843)
                      |.|..|++.|+++..+.+|-..
T Consensus         5 fvcskcgktftrrntm~rha~n   26 (37)
T d1x6ha1           5 FVCSKCGKTFTRRNTMARHADN   26 (37)
T ss_dssp             EECSSSCCEESCHHHHHHHHHH
T ss_pred             eeecccccchhcchHHHHHhhh
Confidence            9999999999999999999765

>d2ctda2 g.37.1.1 (A:61-90) Zinc finger protein 512, ZNF512 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 512, ZNF512
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.58  E-value=0.016  Score=29.53  Aligned_cols=26  Identities=35%  Similarity=0.626  Sum_probs=17.6

Q ss_pred             cccccccccccCCHHHHHHhHHhhcc
Q psy8169          47 RFKCEQCDKRFSSNAELNKHSSAIHQ   72 (843)
Q Consensus        47 ~~~C~~C~~~f~~~~~l~~H~~~~h~   72 (843)
                      .|.|.+|++...+...+..|+...|.
T Consensus         2 ~ftc~hcgkqlks~~gmkyhvmadhn   27 (30)
T d2ctda2           2 MFTCHHCGKQLRSLAGMKYHVMANHN   27 (30)
T ss_dssp             CCCCSSSCCCCSSHHHHHHHHHHHTC
T ss_pred             ceechhHHHHHhhccCceEEEeeccc
Confidence            36677777777777777777655554

>d1bhia_ g.37.1.1 (A:) Transactivation domain of cre-bp1/atf-2 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transactivation domain of cre-bp1/atf-2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.57  E-value=0.011  Score=33.10  Aligned_cols=26  Identities=23%  Similarity=0.383  Sum_probs=12.2

Q ss_pred             Cccccc--ccccccccCHHHHHHHHhhc
Q psy8169         152 GMKFEC--YVCSKVLATSHSLKRHLLIH  177 (843)
Q Consensus       152 ~~~~~C--~~C~~~f~~~~~l~~H~~~h  177 (843)
                      ++||.|  +-|+..|.+...|..|...|
T Consensus         4 dkPF~C~~pGC~q~F~neDhL~vHk~KH   31 (38)
T d1bhia_           4 DKPFLCTAPGCGQRFTNEDHLAVHKHKH   31 (38)
T ss_dssp             CCCEECCCTTTCCEESSHHHHHHHHHHH
T ss_pred             CCceecCCCCccccccchHHHHHhhhhh
Confidence            444555  22555555555554444433

>d1tf3a3 g.37.1.1 (A:71-101) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=93.55  E-value=0.025  Score=28.71  Aligned_cols=26  Identities=38%  Similarity=0.916  Sum_probs=21.2

Q ss_pred             ccccc--ccccccCCHHHHHHhHHhhcc
Q psy8169          47 RFKCE--QCDKRFSSNAELNKHSSAIHQ   72 (843)
Q Consensus        47 ~~~C~--~C~~~f~~~~~l~~H~~~~h~   72 (843)
                      .|+|+  -|+.+|+++.++..|+.+.|.
T Consensus         2 nf~cdsd~cdl~fttkanmkkhfnrfhn   29 (31)
T d1tf3a3           2 NFTCDSDGCDLRFTTKANMKKHFNRFHN   29 (31)
T ss_dssp             CEECSSSSCCCEESSHHHHHHHHHHHTT
T ss_pred             CccccCCCcceEEeehHHHHHHHhhhcc
Confidence            47785  599999999999999877664

>d2eppa1 g.37.1.1 (A:286-338) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.44  E-value=0.028  Score=33.10  Aligned_cols=25  Identities=40%  Similarity=0.832  Sum_probs=22.9

Q ss_pred             cccccccccccCChHHHHHHHhhhcc
Q psy8169         505 IIQCRICSKTFTRKDSLRKHMRRFHI  530 (843)
Q Consensus       505 ~~~C~~C~~~f~~~~~L~~H~~~~H~  530 (843)
                      .|.|.+|++.|+....|+.|-.. |.
T Consensus         6 l~pCG~CgK~Ftd~~rLr~HEAQ-HG   30 (53)
T d2eppa1           6 ILPCGLCGKVFTDANRLRQHEAQ-HG   30 (53)
T ss_dssp             CCCCTTTCCCCSCHHHHHHHHHH-HT
T ss_pred             eeeccccccccCCHHHHhHhHHh-cC
Confidence            38999999999999999999887 65

>d2eppa1 g.37.1.1 (A:286-338) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.32  E-value=0.026  Score=33.27  Aligned_cols=24  Identities=33%  Similarity=0.544  Sum_probs=16.3

Q ss_pred             eeecCcChhccCChHHHHHHHHHh
Q psy8169         275 YLTCLICFKTFLTEVDLGKHMKMH  298 (843)
Q Consensus       275 ~~~C~~C~~~f~~~~~L~~H~~~H  298 (843)
                      .|.|..|++.|+....|+.|...|
T Consensus         6 l~pCG~CgK~Ftd~~rLr~HEAQH   29 (53)
T d2eppa1           6 ILPCGLCGKVFTDANRLRQHEAQH   29 (53)
T ss_dssp             CCCCTTTCCCCSCHHHHHHHHHHH
T ss_pred             eeeccccccccCCHHHHhHhHHhc
Confidence            466777777777777777666655

>d1x6ha1 g.37.1.1 (A:44-80) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.22  E-value=0.03  Score=30.03  Aligned_cols=26  Identities=27%  Similarity=0.696  Sum_probs=20.8

Q ss_pred             ceeccccchhcCChhhHHHHHHHccC
Q psy8169         303 QIQCRFCNKYFSRNYNLKQHMKTCTK  328 (843)
Q Consensus       303 ~~~C~~C~~~f~~~~~L~~H~~~h~~  328 (843)
                      .|.|..|++.|..+..+.+|...+.+
T Consensus         4 afvcskcgktftrrntm~rha~nc~g   29 (37)
T d1x6ha1           4 AFVCSKCGKTFTRRNTMARHADNCAG   29 (37)
T ss_dssp             CEECSSSCCEESCHHHHHHHHHHCCC
T ss_pred             eeeecccccchhcchHHHHHhhhcCC
Confidence            47888888888888888888877665

>d1y0jb1 g.37.1.2 (B:1-36) U-shaped transcription factor, different fingers {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: C2HC finger
domain: U-shaped transcription factor, different fingers
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=92.18  E-value=0.034  Score=29.47  Aligned_cols=25  Identities=24%  Similarity=0.451  Sum_probs=22.1

Q ss_pred             CCCcccccccccccchHHHHHHHHH
Q psy8169         562 KSRIPCELCYKTFTRKDSLRKHMKI  586 (843)
Q Consensus       562 ~~~~~C~~C~~~f~~~~~L~~H~~~  586 (843)
                      ..+|.|..||-.|.+.+.|..|+..
T Consensus         6 parf~c~pcgirfss~stleahqty   30 (36)
T d1y0jb1           6 PARFMCLPCGIAFSSPSTLEAHQAY   30 (36)
T ss_dssp             CCCCBCTTTCCBCSCHHHHHHHTTT
T ss_pred             ccceeccccceeecChhHHHhhhhe
Confidence            4579999999999999999999753

>d1ubdc1 g.37.1.1 (C:295-322) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.23  E-value=0.068  Score=26.95  Aligned_cols=19  Identities=26%  Similarity=0.756  Sum_probs=13.4

Q ss_pred             ccccccCHHHHHHHHhhcC
Q psy8169         160 CSKVLATSHSLKRHLLIHN  178 (843)
Q Consensus       160 C~~~f~~~~~l~~H~~~h~  178 (843)
                      |++.|.+.+.++.|+-+|.
T Consensus         9 C~K~Frd~saMRKHlhtHG   27 (28)
T d1ubdc1           9 CTKMFRDNSAMRKHLHTHG   27 (28)
T ss_dssp             CCCEESSHHHHHHHHGGGS
T ss_pred             HHHHhhchHHHHHHhhccC
Confidence            7777777777777776663

>d1y0jb1 g.37.1.2 (B:1-36) U-shaped transcription factor, different fingers {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: C2HC finger
domain: U-shaped transcription factor, different fingers
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=90.72  E-value=0.093  Score=27.76  Aligned_cols=24  Identities=25%  Similarity=0.465  Sum_probs=21.2

Q ss_pred             CcccccccccccCChHHHHHHHhh
Q psy8169         504 AIIQCRICSKTFTRKDSLRKHMRR  527 (843)
Q Consensus       504 ~~~~C~~C~~~f~~~~~L~~H~~~  527 (843)
                      ..|.|.-||-.|.+.+.|..|...
T Consensus         7 arf~c~pcgirfss~stleahqty   30 (36)
T d1y0jb1           7 ARFMCLPCGIAFSSPSTLEAHQAY   30 (36)
T ss_dssp             CCCBCTTTCCBCSCHHHHHHHTTT
T ss_pred             cceeccccceeecChhHHHhhhhe
Confidence            449999999999999999999753

>d1tf3a3 g.37.1.1 (A:71-101) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=90.53  E-value=0.11  Score=26.41  Aligned_cols=25  Identities=40%  Similarity=0.826  Sum_probs=22.0

Q ss_pred             cccc--ccccccCChHHHHHHHhhhcc
Q psy8169         506 IQCR--ICSKTFTRKDSLRKHMRRFHI  530 (843)
Q Consensus       506 ~~C~--~C~~~f~~~~~L~~H~~~~H~  530 (843)
                      |.|.  .|+.+|+++.++..|..+.|.
T Consensus         3 f~cdsd~cdl~fttkanmkkhfnrfhn   29 (31)
T d1tf3a3           3 FTCDSDGCDLRFTTKANMKKHFNRFHN   29 (31)
T ss_dssp             EECSSSSCCCEESSHHHHHHHHHHHTT
T ss_pred             ccccCCCcceEEeehHHHHHHHhhhcc
Confidence            6775  499999999999999998875

>d2drpa1 g.37.1.1 (A:103-139) Tramtrack protein (two zinc-finger peptide) {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Tramtrack protein (two zinc-finger peptide)
species: Drosophila melanogaster [TaxId: 7227]

Probab=90.47  E-value=0.036  Score=29.84  Aligned_cols=27  Identities=37%  Similarity=0.661  Sum_probs=24.8

Q ss_pred             chhhchhhhhhhhhhhHHHHHhHhhcc
Q psy8169         774 EILCKICNRTFTRNYNLKKHMKTVHKI  800 (843)
Q Consensus       774 ~~~C~~C~~~F~~~~~L~~H~~~~H~~  800 (843)
                      .|+|.+|.+.++.-+++-+|.-+-|..
T Consensus         8 ~yRC~~C~r~YTHISNFCRHyvtSHk~   34 (37)
T d2drpa1           8 TYRCKVCSRVYTHISNFCRHYVTSHKR   34 (37)
T ss_dssp             EEECTTTCCEESSHHHHHHHHHHHSSS
T ss_pred             EEEeehhhHHHHHHHHHHHHHHhhccc
Confidence            399999999999999999999998864

>d1tf3a1 g.37.1.1 (A:1-40) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=90.45  E-value=0.11  Score=26.92  Aligned_cols=27  Identities=26%  Similarity=0.730  Sum_probs=17.5

Q ss_pred             Cceeccc--cchhcCChhhHHHHHHHccC
Q psy8169         302 NQIQCRF--CNKYFSRNYNLKQHMKTCTK  328 (843)
Q Consensus       302 ~~~~C~~--C~~~f~~~~~L~~H~~~h~~  328 (843)
                      +.|.|.+  |+..|.....|..|+-.|++
T Consensus         2 k~~iCsf~dC~A~ynk~wkL~AHLckHTG   30 (31)
T d1tf3a1           2 KRYICSFADCGAAYNKNWKLQAHLSKHTG   30 (31)
T ss_dssp             CCEECSSGGGCCEESSHHHHHHHHHHHHC
T ss_pred             CceEeeCCCcchhhccchhhhHHhhhhcC
Confidence            3466654  77777777777777766654

>d2drpa1 g.37.1.1 (A:103-139) Tramtrack protein (two zinc-finger peptide) {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Tramtrack protein (two zinc-finger peptide)
species: Drosophila melanogaster [TaxId: 7227]

Probab=89.79  E-value=0.1  Score=28.10  Aligned_cols=26  Identities=23%  Similarity=0.623  Sum_probs=23.8

Q ss_pred             cccccccccccCChHHHHHHHhhhcc
Q psy8169         505 IIQCRICSKTFTRKDSLRKHMRRFHI  530 (843)
Q Consensus       505 ~~~C~~C~~~f~~~~~L~~H~~~~H~  530 (843)
                      .|.|.+|.+.++--+++-+|....|.
T Consensus         8 ~yRC~~C~r~YTHISNFCRHyvtSHk   33 (37)
T d2drpa1           8 TYRCKVCSRVYTHISNFCRHYVTSHK   33 (37)
T ss_dssp             EEECTTTCCEESSHHHHHHHHHHHSS
T ss_pred             EEEeehhhHHHHHHHHHHHHHHhhcc
Confidence            39999999999999999999988675

>d1x3ca1 g.37.1.1 (A:8-68) Zinc finger protein 292, ZNF292 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 292, ZNF292
species: Human (Homo sapiens) [TaxId: 9606]

Probab=88.76  E-value=0.15  Score=30.68  Aligned_cols=33  Identities=27%  Similarity=0.523  Sum_probs=28.8

Q ss_pred             CCCCCCCcc--ccccccchhhhhhhhhccccCCCC
Q psy8169         659 PIDRIPCTL--CDKTFTRKDSLKKHIRIFHTQNQP  691 (843)
Q Consensus       659 ~~~~~~C~~--C~~~f~~~~~L~~H~~~~H~~~~p  691 (843)
                      |..+|.|-+  |...|+-+.+|..|++.+|....|
T Consensus        17 pyrpyrcvhqgc~aaftiq~nlilhy~avh~s~lp   51 (61)
T d1x3ca1          17 PYRPYRCVHQGCFAAFTIQQNLILHYQAVHKSDLP   51 (61)
T ss_dssp             SSCSCBCCSTTCCCBCSSHHHHHHHHHHHSSSCCC
T ss_pred             CCCceeeeccchhhhhhhhhhHHHHHHHHhhhcCc
Confidence            445599966  999999999999999999988776

>d2glia2 g.37.1.1 (A:135-167) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=88.51  E-value=0.11  Score=28.54  Aligned_cols=20  Identities=20%  Similarity=0.448  Sum_probs=16.6

Q ss_pred             hhhcCCHHHHHHHHhhccCC
Q psy8169          24 YKVFESRENLMRHLKIHDDK   43 (843)
Q Consensus        24 ~~~f~~~~~l~~H~~~h~~~   43 (843)
                      ++.|..+..|..||+.|++|
T Consensus        14 ~~pf~a~YkLv~H~R~HTgE   33 (33)
T d2glia2          14 LRPFKAQYMLVVHMRRHTGE   33 (33)
T ss_dssp             TCCCSSHHHHHHHTHHHHCC
T ss_pred             CCcchhHHHHHHHHhhcCCC
Confidence            45689999999999999873

>d2ctda2 g.37.1.1 (A:61-90) Zinc finger protein 512, ZNF512 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 512, ZNF512
species: Human (Homo sapiens) [TaxId: 9606]

Probab=88.30  E-value=0.2  Score=25.44  Aligned_cols=25  Identities=20%  Similarity=0.460  Sum_probs=22.8

Q ss_pred             ccccccccccCChHHHHHHHhhhcc
Q psy8169         506 IQCRICSKTFTRKDSLRKHMRRFHI  530 (843)
Q Consensus       506 ~~C~~C~~~f~~~~~L~~H~~~~H~  530 (843)
                      |.|..|++...+...+..|+-..|.
T Consensus         3 ftc~hcgkqlks~~gmkyhvmadhn   27 (30)
T d2ctda2           3 FTCHHCGKQLRSLAGMKYHVMANHN   27 (30)
T ss_dssp             CCCSSSCCCCSSHHHHHHHHHHHTC
T ss_pred             eechhHHHHHhhccCceEEEeeccc
Confidence            8999999999999999999987664

>d1yuja_ g.37.1.1 (A:) GAGA factor {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GAGA factor
species: Drosophila melanogaster [TaxId: 7227]

Probab=87.68  E-value=0.21  Score=29.20  Aligned_cols=28  Identities=25%  Similarity=0.552  Sum_probs=24.7

Q ss_pred             CCcccccccccccCChHHHHHHHhhhcc
Q psy8169         503 NAIIQCRICSKTFTRKDSLRKHMRRFHI  530 (843)
Q Consensus       503 ~~~~~C~~C~~~f~~~~~L~~H~~~~H~  530 (843)
                      +.+-.|++|+.......+|++|+...|.
T Consensus        22 ~qpatcpic~avirqsrnlrrhlel~hf   49 (54)
T d1yuja_          22 EQPATCPICYAVIRQSRNLRRHLELRHF   49 (54)
T ss_dssp             SCCEECTTTCCEESSHHHHHHHHHHHTS
T ss_pred             cCCCCCchHHHHHHHHHHHHHHHHHHhh
Confidence            3448999999999999999999998775

>d2glia2 g.37.1.1 (A:135-167) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=87.49  E-value=0.15  Score=27.92  Aligned_cols=20  Identities=25%  Similarity=0.441  Sum_probs=14.7

Q ss_pred             hhccCChHHHHHHHHHhcCC
Q psy8169         282 FKTFLTEVDLGKHMKMHMDD  301 (843)
Q Consensus       282 ~~~f~~~~~L~~H~~~H~~~  301 (843)
                      ++.|.....|..|+++|+|+
T Consensus        14 ~~pf~a~YkLv~H~R~HTgE   33 (33)
T d2glia2          14 LRPFKAQYMLVVHMRRHTGE   33 (33)
T ss_dssp             TCCCSSHHHHHHHTHHHHCC
T ss_pred             CCcchhHHHHHHHHhhcCCC
Confidence            45577777888888888764

>d2dlka1 g.37.1.1 (A:8-37) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

Probab=87.05  E-value=0.15  Score=25.75  Aligned_cols=22  Identities=23%  Similarity=0.532  Sum_probs=19.0

Q ss_pred             cccccccchhhhhhhhhccccC
Q psy8169         667 LCDKTFTRKDSLKKHIRIFHTQ  688 (843)
Q Consensus       667 ~C~~~f~~~~~L~~H~~~~H~~  688 (843)
                      -||+.|.++..|.-|.+..|..
T Consensus         7 gc~kifsnrqylnhh~kyqh~h   28 (30)
T d2dlka1           7 GCGRIFSNRQYLNHHKKYQHIH   28 (30)
T ss_dssp             TTCCEESSHHHHHHHHHHGGGS
T ss_pred             CchhhhccHHHHHhHHHHHHhh
Confidence            3999999999999999887753

>d1zr9a1 g.37.1.4 (A:28-94) Zinc finger protein 593, ZNF593 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: HkH motif-containing C2H2 finger
domain: Zinc finger protein 593, ZNF593
species: Human (Homo sapiens) [TaxId: 9606]

Probab=86.68  E-value=0.1  Score=34.69  Aligned_cols=23  Identities=30%  Similarity=0.584  Sum_probs=13.8

Q ss_pred             CccccccchhhcCCHHHHHHHHh
Q psy8169          16 ENHMCELCYKVFESRENLMRHLK   38 (843)
Q Consensus        16 ~~~~C~~C~~~f~~~~~l~~H~~   38 (843)
                      ..|-|..|++.|.+...|..|++
T Consensus        14 gqfYCv~C~K~F~se~~l~~H~k   36 (67)
T d1zr9a1          14 GLHRCLACARYFIDSTNLKTHFR   36 (67)
T ss_dssp             GCSEETTTTEECSSHHHHHHHTT
T ss_pred             CEEecccccCccCCHHHHHHHHc
Confidence            34556666666666666666653

>d1tf3a1 g.37.1.1 (A:1-40) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=86.64  E-value=0.19  Score=26.10  Aligned_cols=25  Identities=28%  Similarity=0.594  Sum_probs=14.0

Q ss_pred             cccc--cccccccCHHHHHHHHhhcCC
Q psy8169         155 FECY--VCSKVLATSHSLKRHLLIHNG  179 (843)
Q Consensus       155 ~~C~--~C~~~f~~~~~l~~H~~~h~~  179 (843)
                      |.|.  .|+..|.....|..|+-.|+|
T Consensus         4 ~iCsf~dC~A~ynk~wkL~AHLckHTG   30 (31)
T d1tf3a1           4 YICSFADCGAAYNKNWKLQAHLSKHTG   30 (31)
T ss_dssp             EECSSGGGCCEESSHHHHHHHHHHHHC
T ss_pred             eEeeCCCcchhhccchhhhHHhhhhcC
Confidence            4453  266666666666666655554

>d1x6fa1 g.37.1.1 (A:8-82) Zinc finger protein 462, ZNF462 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 462, ZNF462
species: Human (Homo sapiens) [TaxId: 9606]

Probab=86.61  E-value=0.19  Score=31.89  Aligned_cols=21  Identities=38%  Similarity=0.931  Sum_probs=10.5

Q ss_pred             cccccccccccCCHHHHHHhH
Q psy8169          47 RFKCEQCDKRFSSNAELNKHS   67 (843)
Q Consensus        47 ~~~C~~C~~~f~~~~~l~~H~   67 (843)
                      .|+|.+|+..|.+...|..|+
T Consensus        18 ~yQC~HCd~K~~s~~el~~hl   38 (75)
T d1x6fa1          18 TYQCKHCDSKLQSTAELTSHL   38 (75)
T ss_dssp             CEECSSSCCEESSHHHHHHHH
T ss_pred             eeeechhHHHHhhHHHHHHHH
Confidence            345555555555555555554

>d1ubdc1 g.37.1.1 (C:295-322) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=86.51  E-value=0.19  Score=25.34  Aligned_cols=20  Identities=30%  Similarity=0.634  Sum_probs=16.8

Q ss_pred             cchhhcCCHHHHHHHHhhcc
Q psy8169          22 LCYKVFESRENLMRHLKIHD   41 (843)
Q Consensus        22 ~C~~~f~~~~~l~~H~~~h~   41 (843)
                      -|++.|...++++.|+-+|.
T Consensus         8 gC~K~Frd~saMRKHlhtHG   27 (28)
T d1ubdc1           8 GCTKMFRDNSAMRKHLHTHG   27 (28)
T ss_dssp             TCCCEESSHHHHHHHHGGGS
T ss_pred             cHHHHhhchHHHHHHhhccC
Confidence            38899999999999988773

>d1vd4a_ g.41.3.1 (A:) Transcription initiation factor TFIIE-alpha {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Rubredoxin-like
superfamily: Zinc beta-ribbon
family: Transcriptional factor domain
domain: Transcription initiation factor TFIIE-alpha
species: Human (Homo sapiens) [TaxId: 9606]

Probab=86.04  E-value=0.083  Score=34.46  Aligned_cols=13  Identities=38%  Similarity=1.035  Sum_probs=6.6

Q ss_pred             cccccccccccCC
Q psy8169          47 RFKCEQCDKRFSS   59 (843)
Q Consensus        47 ~~~C~~C~~~f~~   59 (843)
                      .|+|+.|+++|+.
T Consensus        14 ~y~Cp~C~~~ys~   26 (62)
T d1vd4a_          14 SFKCPVCSSTFTD   26 (62)
T ss_dssp             EEECSSSCCEEEH
T ss_pred             ceECCCCCCCcch
Confidence            3555555555544

>d1yuja_ g.37.1.1 (A:) GAGA factor {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GAGA factor
species: Drosophila melanogaster [TaxId: 7227]

Probab=85.96  E-value=0.36  Score=28.20  Aligned_cols=31  Identities=23%  Similarity=0.544  Sum_probs=27.0

Q ss_pred             CCCCceecccccccccChHHHHHHHHhhccC
Q psy8169         442 QANKIIQCHICLKTFAKKDSLKKHMKVFHTY  472 (843)
Q Consensus       442 ~~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~  472 (843)
                      ..+.+-.|++|+.......+|++|+...|-.
T Consensus        20 ~s~qpatcpic~avirqsrnlrrhlel~hf~   50 (54)
T d1yuja_          20 QSEQPATCPICYAVIRQSRNLRRHLELRHFA   50 (54)
T ss_dssp             TTSCCEECTTTCCEESSHHHHHHHHHHHTSC
T ss_pred             cccCCCCCchHHHHHHHHHHHHHHHHHHhhc
Confidence            5567889999999999999999999987743

>d1vd4a_ g.41.3.1 (A:) Transcription initiation factor TFIIE-alpha {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Rubredoxin-like
superfamily: Zinc beta-ribbon
family: Transcriptional factor domain
domain: Transcription initiation factor TFIIE-alpha
species: Human (Homo sapiens) [TaxId: 9606]

Probab=84.89  E-value=0.19  Score=32.67  Aligned_cols=37  Identities=19%  Similarity=0.454  Sum_probs=22.9

Q ss_pred             CcceeecCcChhccCChHHHHHHHHHhcCCCceeccccch
Q psy8169         272 SNVYLTCLICFKTFLTEVDLGKHMKMHMDDNQIQCRFCNK  311 (843)
Q Consensus       272 ~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~~C~~  311 (843)
                      ....|.|+.|+++|.....++.   .-.....|.|.+|+-
T Consensus        11 ~~~~y~Cp~C~~~ys~Lda~~L---~d~~~~~F~C~~C~~   47 (62)
T d1vd4a_          11 NRASFKCPVCSSTFTDLEANQL---FDPMTGTFRCTFCHT   47 (62)
T ss_dssp             SSSEEECSSSCCEEEHHHHHHH---EETTTTEEBCSSSCC
T ss_pred             cCCceECCCCCCCcchhhHHHh---cCcCCCeEEecCCCC
Confidence            3446888888888765554432   333445677777754

>d1zr9a1 g.37.1.4 (A:28-94) Zinc finger protein 593, ZNF593 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: HkH motif-containing C2H2 finger
domain: Zinc finger protein 593, ZNF593
species: Human (Homo sapiens) [TaxId: 9606]

Probab=84.73  E-value=0.1  Score=34.70  Aligned_cols=24  Identities=29%  Similarity=0.558  Sum_probs=21.9

Q ss_pred             CCCCCccccccccchhhhhhhhhc
Q psy8169         661 DRIPCTLCDKTFTRKDSLKKHIRI  684 (843)
Q Consensus       661 ~~~~C~~C~~~f~~~~~L~~H~~~  684 (843)
                      ..|.|..|++.|.+...|..|+++
T Consensus        14 gqfYCv~C~K~F~se~~l~~H~ks   37 (67)
T d1zr9a1          14 GLHRCLACARYFIDSTNLKTHFRS   37 (67)
T ss_dssp             GCSEETTTTEECSSHHHHHHHTTC
T ss_pred             CEEecccccCccCCHHHHHHHHcc
Confidence            349999999999999999999976

>d1x6fa1 g.37.1.1 (A:8-82) Zinc finger protein 462, ZNF462 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 462, ZNF462
species: Human (Homo sapiens) [TaxId: 9606]

Probab=82.73  E-value=0.54  Score=29.78  Aligned_cols=26  Identities=19%  Similarity=0.450  Sum_probs=17.0

Q ss_pred             ceeecCcChhccCChHHHHHHHHHhc
Q psy8169         274 VYLTCLICFKTFLTEVDLGKHMKMHM  299 (843)
Q Consensus       274 ~~~~C~~C~~~f~~~~~L~~H~~~H~  299 (843)
                      .+|.|..|...|.+..+|..|+..|.
T Consensus        17 ~~yQC~HCd~K~~s~~el~~hl~~hn   42 (75)
T d1x6fa1          17 STYQCKHCDSKLQSTAELTSHLNIHN   42 (75)
T ss_dssp             SCEECSSSCCEESSHHHHHHHHHHHH
T ss_pred             ceeeechhHHHHhhHHHHHHHHHhcc
Confidence            35667767666666666666666654

>d1nnqa2 g.41.5.1 (A:135-171) Rubrerythrin, C-terminal domain {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Small proteins
fold: Rubredoxin-like
superfamily: Rubredoxin-like
family: Rubredoxin
domain: Rubrerythrin, C-terminal domain
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=82.47  E-value=0.18  Score=28.83  Aligned_cols=9  Identities=33%  Similarity=0.855  Sum_probs=8.2

Q ss_pred             CCCcccccc
Q psy8169         663 IPCTLCDKT  671 (843)
Q Consensus       663 ~~C~~C~~~  671 (843)
                      |.|++||..
T Consensus         6 ~~C~vCG~i   14 (37)
T d1nnqa2           6 YICPICGYT   14 (37)
T ss_dssp             EECTTTCCE
T ss_pred             EECCCCCCE
Confidence            899999987