Diaphorina citri psyllid: psy8218

Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------23
MSTGRAGAPTTVCDIRLVDWDEGNYRVCDKPFPRGEILIGGSNISPGYYKNPTKTKEDFFDEEGKRWFRTGDIGELHQDGVIRIIDRKKDLVKLQAGEYVSLGKVEAELKTCPVIENICVYGDSRKDYTVALVVPNPSRLKEIAEKLNLDSLTFQQLCTHPEIEKQVLVELQEHGKKSNLERFEIPNAVKLCSEVWSPDMGLVTAAFKLKRKDIQERYQHEINRMYAS
ccccccccccccCEEEEEEccccccccccccccccEEEEccccccccccccccccccccccccccccEECccCEEEcccccEEEEEccccHHHcccccEEccHHHHHHHHccccccEEEEEECccccEEEEEEEccHHHHHHHHHHcccccccHHHHHccHHHHHHHHHHHHHHHHHccccccccEEEEEEEccccccccccccccccccHHHHHHHHHHHHHHHHcc
**TGRAGAPTTVCDIRLVDWDEGNYRVCDKPFPRGEILIGGSNISPGYYKNPTKTKEDFFDEEGKRWFRTGDIGELHQDGVIRIIDRKKDLVKLQAGEYVSLGKVEAELKTCPVIENICVYGDSRKDYTVALVVPNPSRLKEIAEKLNLDSLTFQQLCTHPEIEKQVLVELQEHGKKSNLERFEIPNAVKLCSEVWSPDMGLVTAAFKLKRKDIQERYQHEINRMYA*
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MSTGRAGAPTTVCDIRLVDWDEGNYRVCDKPFPRGEILIGGSNISPGYYKNPTKTKEDFFDEEGKRWFRTGDIGELHQDGVIRIIDRKKDLVKLQAGEYVSLGKVEAELKTCPVIENICVYGDSRKDYTVALVVPNPSRLKEIAEKLNLDSLTFQQLCTHPEIEKQVLVELQEHGKKSNLERFEIPNAVKLCSEVWSPDMGLVTAAFKLKRKDIQERYQHEINRMYAS

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
Long chain acyl-CoA synthetase 9, chloroplastic Activation of long-chain fatty acids for both synthesis of cellular lipids, and degradation via beta-oxidation. Preferentially uses palmitate, palmitoleate, oleate and linoleate.confidentQ9CAP8
Long-chain-fatty-acid--CoA ligase 4 Activation of long-chain fatty acids for both synthesis of cellular lipids, and degradation via beta-oxidation. Preferentially uses arachidonate and eicosapentaenoate as substrates.confidentO60488
Long-chain-fatty-acid--CoA ligase 4 Activation of long-chain fatty acids for both synthesis of cellular lipids, and degradation via beta-oxidation. Preferentially uses arachidonate and eicosapentaenoate as substrates.confidentO35547

Prediction of Gene Ontology Terms ?

GO Term ?Description ?Confidence Level ?Parent GO Terms ?
GO:0005783 [CC]endoplasmic reticulumprobableGO:0005737, GO:0043231, GO:0044464, GO:0043229, GO:0005623, GO:0005622, GO:0005575, GO:0044444, GO:0044424, GO:0043227, GO:0043226
GO:0005811 [CC]lipid particleprobableGO:0005737, GO:0044464, GO:0005623, GO:0005622, GO:0005575, GO:0044444, GO:0044424
GO:0044425 [CC]membrane partprobableGO:0005575, GO:0016020
GO:0031957 [MF]very long-chain fatty acid-CoA ligase activityprobableGO:0003824, GO:0003674, GO:0015645, GO:0016874, GO:0016877
GO:0031175 [BP]neuron projection developmentprobableGO:0032502, GO:0030030, GO:0030154, GO:0048468, GO:0007275, GO:0071840, GO:0048869, GO:0016043, GO:0008150, GO:0044699, GO:0048666, GO:0032501, GO:0030182, GO:0009987, GO:0044767, GO:0044763, GO:0022008, GO:0048699, GO:0044707, GO:0007399, GO:0048856, GO:0048731
GO:0009941 [CC]chloroplast envelopeprobableGO:0009526, GO:0005737, GO:0009536, GO:0005575, GO:0043231, GO:0044464, GO:0043229, GO:0031967, GO:0031975, GO:0044446, GO:0044444, GO:0005623, GO:0044435, GO:0044434, GO:0044424, GO:0005622, GO:0043227, GO:0043226, GO:0044422, GO:0009507
GO:0043025 [CC]neuronal cell bodyprobableGO:0005575, GO:0097458, GO:0044297, GO:0005623, GO:0044464
GO:0047676 [MF]arachidonate-CoA ligase activityprobableGO:0016878, GO:0003824, GO:0003674, GO:0016874, GO:0016877
GO:0046889 [BP]positive regulation of lipid biosynthetic processprobableGO:0009893, GO:0019222, GO:0009891, GO:0019216, GO:0009889, GO:0008150, GO:0045834, GO:0046890, GO:0048518, GO:0065007, GO:0050789, GO:0080090
GO:0005618 [CC]cell wallprobableGO:0005575, GO:0071944, GO:0044464, GO:0005623, GO:0030312
GO:0004467 [MF]long-chain fatty acid-CoA ligase activityprobableGO:0003824, GO:0003674, GO:0015645, GO:0016874, GO:0016877
GO:0051050 [BP]positive regulation of transportprobableGO:0051049, GO:0065007, GO:0048518, GO:0008150, GO:0032879, GO:0050789
GO:0010033 [BP]response to organic substanceprobableGO:0042221, GO:0050896, GO:0008150
GO:0009605 [BP]response to external stimulusprobableGO:0050896, GO:0008150
GO:0005829 [CC]cytosolprobableGO:0005737, GO:0044464, GO:0005623, GO:0005622, GO:0005575, GO:0044444, GO:0044424
GO:0044539 [BP]long-chain fatty acid importprobableGO:0051234, GO:0015718, GO:0015908, GO:0006869, GO:0015849, GO:0006811, GO:0006810, GO:0015711, GO:0051179, GO:0044765, GO:0008150, GO:0071702, GO:0015909, GO:0033036, GO:0010876, GO:0006820, GO:0044699, GO:0046942
GO:0006633 [BP]fatty acid biosynthetic processprobableGO:0006631, GO:0019752, GO:0044249, GO:0044281, GO:0044283, GO:0072330, GO:1901576, GO:0044710, GO:0044711, GO:0071704, GO:0006629, GO:0009987, GO:0032787, GO:0009058, GO:0008150, GO:0008152, GO:0043436, GO:0044255, GO:0008610, GO:0044238, GO:0006082, GO:0046394, GO:0016053, GO:0044237
GO:0016405 [MF]CoA-ligase activityprobableGO:0003824, GO:0003674, GO:0016874, GO:0016877
GO:0005515 [MF]protein bindingprobableGO:0003674, GO:0005488
GO:0048471 [CC]perinuclear region of cytoplasmprobableGO:0005737, GO:0044464, GO:0005623, GO:0005622, GO:0005575, GO:0044444, GO:0044424
GO:0001676 [BP]long-chain fatty acid metabolic processprobableGO:0044238, GO:0006631, GO:0006629, GO:0006082, GO:0009987, GO:0044710, GO:0044237, GO:0032787, GO:0071704, GO:0008150, GO:0019752, GO:0008152, GO:0043436, GO:0044255, GO:0044281
GO:0005777 [CC]peroxisomeprobableGO:0005737, GO:0043231, GO:0044464, GO:0043229, GO:0005623, GO:0005622, GO:0005575, GO:0042579, GO:0044444, GO:0044424, GO:0043227, GO:0043226
GO:0006641 [BP]triglyceride metabolic processprobableGO:0044238, GO:0044710, GO:0009987, GO:0006629, GO:0006639, GO:0006638, GO:0044237, GO:0071704, GO:0008150, GO:0008152, GO:0044255, GO:0046486
GO:0046949 [BP]fatty-acyl-CoA biosynthetic processprobableGO:1901576, GO:0035383, GO:0051186, GO:0006637, GO:0035384, GO:0071704, GO:0006732, GO:0009987, GO:0051188, GO:0044237, GO:0044249, GO:0009058, GO:0009108, GO:0071616, GO:0008152, GO:0006793, GO:0008150, GO:0035337
GO:0005794 [CC]Golgi apparatusprobableGO:0005737, GO:0043231, GO:0044464, GO:0043229, GO:0005623, GO:0005622, GO:0005575, GO:0044444, GO:0044424, GO:0043227, GO:0043226
GO:0032307 [BP]negative regulation of prostaglandin secretionprobableGO:0032879, GO:2000192, GO:0051046, GO:0051051, GO:2000191, GO:0051048, GO:0051049, GO:0008150, GO:0032369, GO:0032304, GO:0043271, GO:0032306, GO:0065007, GO:0048519, GO:0032303, GO:0032890, GO:0032891, GO:0044070, GO:0032368, GO:0050789, GO:0043269
GO:0030307 [BP]positive regulation of cell growthprobableGO:0045927, GO:0040008, GO:0051128, GO:0001558, GO:0065007, GO:0048518, GO:0008150, GO:0050794, GO:0050789, GO:0048522
GO:0031328 [BP]positive regulation of cellular biosynthetic processprobableGO:0009893, GO:0019222, GO:0009891, GO:0031326, GO:0031325, GO:0009889, GO:0050794, GO:0031323, GO:0065007, GO:0048518, GO:0008150, GO:0050789, GO:0048522
GO:0031966 [CC]mitochondrial membraneprobableGO:0005737, GO:0005575, GO:0031090, GO:0043229, GO:0016020, GO:0044464, GO:0044444, GO:0031967, GO:0031975, GO:0044446, GO:0005740, GO:0005739, GO:0044429, GO:0044424, GO:0005623, GO:0005622, GO:0043227, GO:0043226, GO:0044422, GO:0043231
GO:0005886 [CC]plasma membraneprobableGO:0005575, GO:0044464, GO:0016020, GO:0071944, GO:0005623

Prediction of Enzyme Commission Number ?

No confident prediction of EC number!

Spatial Structural Prediction

Structural Models Based on Templates

Template: 3L8C, chain A
Confidence level:very confident
Coverage over the Query: 2-142,161-219
View the alignment between query and template
View the model in PyMOL
Template: 1MD9, chain A
Confidence level:probable
Coverage over the Query: 7-117,131-137,150-217
View the alignment between query and template
View the model in PyMOL