Diaphorina citri psyllid: psy8250


Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210--
METFHPLFGDTNYKESLSGIAESGSLLAIMGPSGAGKTTLLACISQRIQGDVDGQILLNGLEVEKNLMVKVSGFVPQHDLTVDTLTVHEHMTLMARLKMDRNLHHVERARTVDALLKELGLLKCKNSVLNVLSGGERKRVALAVQTIIVQSGFVPQHDLTVDTLTVHEHMTLMARLKMDRNLHHVERARTVDALLKELGLLKCRPADELNRQ
cccccccccccccccccEEEECccEEEEEEccccccHHHHHHHHHcccccccCEEEEEccEEccccccccEEEEEEccccccccccHHHHHHHHHHccccccccHHHHHHHHHHHHHHHcccccccccccccccHHHHHHHHHHHHHcccccccccccccccHHHHHHHHHHHHHHHHcccEEEEcccccHHHHHHHHHHccccccHHHHcc
*******FGDTNYKESLSGIAESGSLLAIMGPSGAGKTTLLACISQRIQGDVDGQILLNGLEVEKNLMVKVSGFVPQHDLTVDTLTVHEHMTLMARLKMDRNLHHVERARTVDALLKELGLLKCKNSVLNVLSGGERKRVALAVQTIIVQSGFVPQHDLTVDTLTVHEHMTLMARLKMDRNLHHVERARTVDALLKELGLLKCR********
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METFHPLFGDTNYKESLSGIAESGSLLAIMGPSGAGKTTLLACISQRIQGDVDGQILLNGLEVEKNLMVKVSGFVPQHDLTVDTLTVHEHMTLMARLKMDRNLHHVERARTVDALLKELGLLKCKNSVLNVLSGGERKRVALAVQTIIVQSGFVPQHDLTVDTLTVHEHMTLMARLKMDRNLHHVERARTVDALLKELGLLKCRPADELNRQ

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

No confident close homologs for annotation transfering were detected in SWISSPROT

Prediction of Gene Ontology Terms ?

GO Term ?Description ?Confidence Level ?Parent GO Terms ?
GO:0006869 [BP]lipid transportprobableGO:0051234, GO:0006810, GO:0044765, GO:0008150, GO:0071702, GO:0033036, GO:0010876, GO:0051179, GO:0044699
GO:0033993 [BP]response to lipidprobableGO:0042221, GO:0050896, GO:0008150, GO:0010033
GO:0015850 [BP]organic hydroxy compound transportprobableGO:0006810, GO:0044765, GO:0008150, GO:0071702, GO:0051234, GO:0051179, GO:0044699
GO:0009651 [BP]response to salt stressprobableGO:0008150, GO:0009628, GO:0006950, GO:0006970, GO:0050896
GO:0022892 [MF]substrate-specific transporter activityprobableGO:0005215, GO:0003674
GO:0022857 [MF]transmembrane transporter activityprobableGO:0005215, GO:0003674
GO:0005739 [CC]mitochondrionprobableGO:0005737, GO:0043231, GO:0044464, GO:0043229, GO:0005623, GO:0005622, GO:0005575, GO:0044444, GO:0044424, GO:0043227, GO:0043226
GO:0042803 [MF]protein homodimerization activityprobableGO:0046983, GO:0003674, GO:0005515, GO:0042802, GO:0005488
GO:0009986 [CC]cell surfaceprobableGO:0005575, GO:0044464, GO:0005623
GO:0009719 [BP]response to endogenous stimulusprobableGO:0050896, GO:0008150
GO:0043492 [MF]ATPase activity, coupled to movement of substancesprobableGO:0016787, GO:0016818, GO:0042623, GO:0003824, GO:0016817, GO:0017111, GO:0016462, GO:0003674, GO:0016887
GO:0044459 [CC]plasma membrane partprobableGO:0016020, GO:0044464, GO:0005623, GO:0005575, GO:0071944, GO:0005886, GO:0044425

Prediction of Enzyme Commission Number ?

No confident prediction of EC number!


Spatial Structural Prediction

Structural Models Based on Templates

Template: 3BK7, chain A
Confidence level:very confident
Coverage over the Query: 2-58,69-210
View the alignment between query and template
View the model in PyMOL
Template: 3TIF, chain A
Confidence level:very confident
Coverage over the Query: 1-207
View the alignment between query and template
View the model in PyMOL