Diaphorina citri psyllid: psy8265

Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630
MHKIKEENQYRSRGELGRYLLRYHFVLTPLNSVINLITHAIYRPYYPEYQPYTVSNGFSLPTYEVNKSNDCDKLYCHQTLTADQNSKGYSSPYITLPLCSDLPQSHKLPSKSLNSKSLDGLSSNDSSPVPSNHLVTPKVEDIKSESFNYSEVPRQTVLMWGSNPSRSPPASPILPNGHINYPSQEIKKYNGDPLKSLAEMNTIGENKWKESPPVVSPKSYYQSYNENGPSERLDIRGRIKILHGQNRKLEEPPLALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVYKNSKPDFVISTHRPLMEEEGRDLLGKRTMDFKVSYLDAGLNNSYFSDSDQLTPSHQTLAPSPGSAQSGSSSTTPQRVNRRYKTQLRDFLSTCRTKRKMSAQHAAPPPPTPAPPIEYLTPPDAVAAAYSNMYTTGYSATTPEYMSQSLYDNRLPYENLFHQYRPYYPEYQPYTVSNGFSLPTYEVNKSNDCDKLYCHQTLTADQNSKGYSSPFESDIVHQSVYELVHSEDREELQRQLMWNSFLPPESAGISLQECFLQENSYLLERSFT
ccccccccccccccccccEEEEccccccccccccccEEEccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHcccccccccccccccccccccccccccccccccccccccHHHHHccccccccccccccccccccCEEccccccccEEEEEEEEEEEcccccccccccEEEEEEEECccccccccccccccEEEEECccccEEEEEccccccccccccccccccccccEEccccHHHHHHHHHHHHHccccEEEEEEEEEccccEEEEEEEEEEEEEcccccEEEEEcccccccccHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHcccccHHHHHHHHHccccccccccccccccccccccccccccccccc
**************ELGRYLLRYHFVLTPLNSVINLITHAIYRPYYPEYQPYTVSNGFSLPTYEVNKSNDCDKLYCHQT*****************PLC******************************PSNHLVTPKVED****************L***********************************************NKWKESPPVVSPKSYYQSYNENGPSERLDIRGRIKILHGQNRKLEEPPLALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVYKNSKPDFVISTHRPLME****DLLGKRTMDFKVSYLDAGLNNSY************************************************************************L**PDAVAAAYSNMYTTGYSATTPEYMSQSLYDNRLPYENLFHQYRPYYPEYQPYTVSNGFSLPTYEVNKSNDCDKLYCHQTLTA*************DIVHQSVYELVH******LQRQLMWNSFLPPESAGISLQECF***N*YLLERSFT
xxxxxxxxxxxxxxxxxxxxHHHHHHHHHHHHHHHHHHHHHHxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
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MHKIKEENQYRSRGELGRYLLRYHFVLTPLNSVINLITHAIYRPYYPEYQPYTVSNGFSLPTYEVNKSNDCDKLYCHQTLTADQNSKGYSSPYITLPLCSDLPQSHKLPSKSLNSKSLDGLSSNDSSPVPSNHLVTPKVEDIKSESFNYSEVPRQTVLMWGSNPSRSPPASPILPNGHINYPSQEIKKYNGDPLKSLAEMNTIGENKWKESPPVVSPKSYYQSYNENGPSERLDIRGRIKILHGQNRKLEEPPLALFAICTPFGPPSLLEIPHKEVMFKSKHKLDLSLVSMDQRGKMLLGYSDTELANMGGYDLVHYDDLAYVASAHQELLKTGASGMIAYRFQTNDGGWQWLQTSSRLVYKNSKPDFVISTHRPLMEEEGRDLLGKRTMDFKVSYLDAGLNNSYFSDSDQLTPSHQTLAPSPGSAQSGSSSTTPQRVNRRYKTQLRDFLSTCRTKRKMSAQHAAPPPPTPAPPIEYLTPPDAVAAAYSNMYTTGYSATTPEYMSQSLYDNRLPYENLFHQYRPYYPEYQPYTVSNGFSLPTYEVNKSNDCDKLYCHQTLTADQNSKGYSSPFESDIVHQSVYELVHSEDREELQRQLMWNSFLPPESAGISLQECFLQENSYLLERSFT

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

No confident close homologs for annotation transfering were detected in SWISSPROT

Prediction of Gene Ontology Terms ?

GO Term ?Description ?Confidence Level ?Parent GO Terms ?
GO:0003705 [MF]RNA polymerase II distal enhancer sequence-specific DNA binding transcription factor activityprobableGO:0003700, GO:0003674, GO:0001071, GO:0000981

Prediction of Enzyme Commission Number ?

No confident prediction of EC number!

Spatial Structural Prediction

Structural Models Based on Templates

Template: 4F3L, chain B
Confidence level:very confident
Coverage over the Query: 110-377
View the alignment between query and template
View the model in PyMOL
Template: 4DJ2, chain A
Confidence level:confident
Coverage over the Query: 534-601
View the alignment between query and template
View the model in PyMOL
Template: 4HIA, chain A
Confidence level:confident
Coverage over the Query: 282-408
View the alignment between query and template
View the model in PyMOL
Template: 4DJ3, chain A
Confidence level:confident
Coverage over the Query: 505-521,534-606
View the alignment between query and template
View the model in PyMOL