Diaphorina citri psyllid: psy8304

Local Sequence Feature Prediction

Prediction and Method	Result

Residue Number Marker

Protein Sequence

Secondary Structure (Consensus)

Disordered Region (Consensus)

Transmembrane Helix (Consensus)

Signal Peptide (Consensus)

Coiled Coil (COILS)

--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590---

MKTYKIVSTQLQITTGSQFAEKTEVPNVSKVEEQPKQAQNREDAESTDQVASETSSDQESQQSAPKHGYVDRPPPPPAPIVAPPRPHPNGRHPSHGKPQFNHKLGGVYHGPPPPPPPLSAAKPPPVQPEAMDKSGYGPPPPPPLLAPAPDPWPNAVADTPKIVSLDVKCEKNSMKVFISFDKPFFGIVFSKGHYSNVNCVHLPAGLGRTSANFEIGIHACGTSGNTENGLYGYGADAGSGTYFENIIVIQYDPQVQEVWDQARKLRCTWHDQYEKSVTFRPFPVDMLDVVRADFAGDNVGCWMQIQVGKGPWASEVSGLVKIGQTMTMVLAIKDDDSKFDMLVRNCMAHDGKRAPIQLVDQRGCVTRSKLMSRFTKIKNFGASASVLSYAHFQAFKFPDSMEVHFQCTIQICRYQCPDQCSSDSGDLHPQHTQLLEAHHSSSNVEATYGNNLPIDVFLHGGSGGQPRDERRVRRHRRDTGEKEDIGVNKIIKVVSTGDLTFALDDSNSTSQTMIFPTNMEDNSGMICMTTIGFSATLFVLLGILVVSCLVSACLCIRLRPFSNKTSQKTMSVSYTNPIVSVKKTSKSSFYTSS

ccEEEEEEEcEEEccccccccCEEEEEcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEEEccccEEEEEEcccccCEEEEEcccccccccEEcccccccCEEEEEEccccccccccccccccccccccccccEEEEEEEEEcccccccccccEEEEEEEEccccccccccccccccccccEEccccccccCEEEEEECcccccccccEEEEEEccEEEEEEEEEcccccccEEEEEEEEEccccccEEEEccccccccccccccEEEcccccccccEEEEEEEEEEEcccccEEEEEEEEEEccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHcccccccccccccccccEEEEEEEccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccEECccccccccccccccccccc

****K**********************************************************************************************************************************************APDPWPNAVADTPKIVSLDVKCEKNSMKVFISFDKPFFGIVFSKGHYSNVNCVHLPAGLGRTSANFEIGIHACGTSGNTENGLYGYGADAGSGTYFENIIVIQYDPQVQEVWDQARKLRCTWHDQYEKSVTFRPFPVDMLDVVRADFAGDNVGCWMQIQVGKGPWASEVSGLVKIGQTMTMVLAIKDDDSKFDMLVRNCMAHDGKRAPIQLVDQRGCVTRSKLMSRFTKIKNFGASASVLSYAHFQAFKFPDSMEVHFQCTIQICRYQCPD******************************************************************IGVNKIIKVVSTGDLTF****************NMEDNSGMICMTTIGFSATLFVLLGILVVSCLVSACLCIRLRPF********************************

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Function Prediction

Prediction of Gene Ontology Terms

GO Term	Description	Confidence Level	Parent GO Terms
GO:0016324 [CC]	apical plasma membrane	probable	GO:0045177, GO:0016020, GO:0044464, GO:0005623, GO:0005575, GO:0071944, GO:0005886, GO:0044425, GO:0044459
GO:0007160 [BP]	cell-matrix adhesion	probable	GO:0031589, GO:0009987, GO:0044763, GO:0007155, GO:0008150, GO:0022610, GO:0044699
GO:0016476 [BP]	regulation of embryonic cell shape	probable	GO:0022604, GO:0051239, GO:0022603, GO:0050793, GO:0051128, GO:0008150, GO:0008360, GO:2000026, GO:0045995, GO:0065007, GO:0065008, GO:0050789, GO:0050794
GO:0007623 [BP]	circadian rhythm	probable	GO:0048511, GO:0008150
GO:0003383 [BP]	apical constriction	probable	GO:0030154, GO:0048468, GO:0006928, GO:0003382, GO:0009653, GO:0044699, GO:0000904, GO:0000902, GO:0048869, GO:0016043, GO:0032989, GO:0071840, GO:0030855, GO:0002064, GO:0032502, GO:0009987, GO:0030029, GO:0060429, GO:0009888, GO:0044767, GO:0030048, GO:0044763, GO:0048856, GO:0008150, GO:0070252
GO:0007015 [BP]	actin filament organization	probable	GO:0006996, GO:0007010, GO:0071822, GO:0030029, GO:0043933, GO:0071840, GO:0009987, GO:0030036, GO:0044763, GO:0016043, GO:0008150, GO:0044699

Prediction of Enzyme Commission Number

No confident prediction of EC number!

Spatial Structural Prediction

Structural Models Based on Templates

Template: 3NK4, chain A
Confidence level:confident
Coverage over the Query: 164-227,238-271,284-421
View the alignment between query and template
View the model in PyMOL

Template: 2L2T, chain A
Confidence level:probable
Coverage over the Query: 538-564
View the alignment between query and template
View the model in PyMOL

Template: 1M2V, chain B
Confidence level:probable
Coverage over the Query: 112-124
View the alignment between query and template
View the model in PyMOL