Diaphorina citri psyllid: psy8308

Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-
MDPNYLSILKGRDTALEKIYKEKQLHRIFEKNAALSPDNTALIFEEQDKDTLVITNETYSELNSASNQLARGLLHFLHTKAVPNENQDGDHIVAVSLAPSSGLIQVLLAVWKAGAAYLPLDVTAPEQRVKHILNEARPLLVIAENEQACENLAYKGRTVLSLPQLRLLSASLSHNNIPGESMLHSDNNNEQSNDIAIVLYTSGSTGIPKGVRLPHEVILNRLAWQWATFPYSPSERVGAFKTALTFVDAVSEIWGPLLSARCGGVLIIPRDVTRNPDQLIGTLEKYKVERLVLVPSLLRSMLMFLKMTGTN
ccHHHHHHHHHcccccccccccccHHHHHHHHHHHccccEEEEEccccccccccccccHHHHHHHHHHHHHHHHHHHHHccccccccccccEEEEEEcccHHHHHHHHHHHHHccccccccccccHHHHHHHHHcccccEEEEcccHHHHcccccccEEEEccHHHHHHHccccccccccccccccccccccccEEEEEEcccccccccccccccHHHHHHHHHHHHHcccccccEEEEccccccccHHHHHHHHHHHcccccEEEEEcccccccHHHHHHHHHHccccEEEEcHHHHHHHHHHHHHcccc
MDPNYLSILKGRDTALEKIYKEKQLHRIFEKNAALSPDNTALIFEEQDKDTLVITNETYSELNSASNQLARGLLHFLHTKAVPNENQDGDHIVAVSLAPSSGLIQVLLAVWKAGAAYLPLDVTAPEQRVKHILNEARPLLVIAENEQACENLAYKGRTVLSLPQLRLLSASLSHNNI***********NEQSNDIAIVLYTSGSTGIPKGVRLPHEVILNRLAWQWATFPYSPSERVGAFKTALTFVDAVSEIWGPLLSARCGGVLIIPRDVTRNPDQLIGTLEKYKVERLVLVPSLLRSMLMFLK*****
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
MDPNYLSILKGRDTALEKIYKEKQLHRIFEKNAALSPDNTALIFEEQDKDTLVITNETYSELNSASNQLARGLLHFLHTKAVPNENQDGDHIVAVSLAPSSGLIQVLLAVWKAGAAYLPLDVTAPEQRVKHILNEARPLLVIAENEQACENLAYKGRTVLSLPQLRLLSASLSHNNIPGESMLHSDNNNEQSNDIAIVLYTSGSTGIPKGVRLPHEVILNRLAWQWATFPYSPSERVGAFKTALTFVDAVSEIWGPLLSARCGGVLIIPRDVTRNPDQLIGTLEKYKVERLVLVPSLLRSMLMFLKMTGTN

Function Prediction

Prediction of Gene Ontology Terms ?

GO Term ?Description ?Confidence Level ?Parent GO Terms ?
GO:0044710 [BP]single-organism metabolic processprobableGO:0008150, GO:0008152
GO:0005737 [CC]cytoplasmprobableGO:0044424, GO:0005575, GO:0044464, GO:0005623, GO:0005622
GO:0019184 [BP]nonribosomal peptide biosynthetic processprobableGO:0071704, GO:0043604, GO:0044271, GO:1901566, GO:0043603, GO:1901576, GO:0009987, GO:0043043, GO:0034641, GO:0044237, GO:0044249, GO:0009058, GO:0006807, GO:0008150, GO:0008152, GO:1901564, GO:0006518

Prediction of Enzyme Commission Number ?

No confident prediction of EC number!

Spatial Structural Prediction

Structural Models Based on Templates

Template: 3KXW, chain A
Confidence level:very confident
Coverage over the Query: 19-305
View the alignment between query and template
View the model in PyMOL