Diaphorina citri psyllid: psy8348

Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620--
MKTLKGAGQEVGRSCIMLEFKNKSIMMDCGIHPGLSGMDALPFVDLVESDQIDLLLISHFHLDHCGALPWFLLKTGFKGRCFMTHATKAIYRWLLSDYIKVSNISTEQMLYTESDLEKSMDKIETINFHEEKDVNGIKFSAYNAGHVLGAAMFLIEIAGVKILYTGDFSRQEDRHLMAAEIPPVKPDILITESTYGTHVHEQREEREGRFTSLIHDIVNRGGRCLIPVFALGRAQELLLILDEYWSLHPELHDIPIYYASSLAKKCMSVYQTYINAMNDRIRRQISINNPFVFKHISNLKGIDHFEDIGPCVVMASPGMMQSGLSRELFEMWCTDAKNGVIIAGYCVEGTLAKTILSEPEEVIGMSGQRLPLKMSVDYISFSAHTDYQQTSEFVRELRPAHVVLVHGEQNEMSRLKAALTREYEDDPNTSMELYNPRNTVSVDLYFKGEKTAKVMGELAVENLKPDAALSGIIVKRNFNYHLLAPSDLPKYTDLKASKIIQQQSVYYSGSISVLRSLISHLAGPVETLDEKRLRAFACIEITLEKCIVVLEWASNPISDMYADSLISECLIEILVEMYGEAAVPKMFKGEKITITVDKKKACIDLVDLSVQCEDSKLKSTVQ
ccccccccccccccEEEEEEccCEEEEEcccccccccccccccccccccccccEEEEEcccccccccccHHHHHccccccccccHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHccEEEccccEEEEccEEEEcccccHHHHHHEEEEEEccEEEEEEccccccccccccccccccccccEEEEccccccccccccHHHHHHHHHHHHHHHHcccCEEEEcccHHHHHHHHHHHHHHHHHccccccccEEEEccHHHHHHHHHHHcHHHHcHHHHHHHHccccccccccCECccHHHccccccEEEEEcccccccccHHHHHHHccccccccEEEEcccccccHHHHHHcccccccCCcccEEEEEEEEEEEcccccccHHHHHHHHHHccccEEEEEcccHHHHHHHHHHHHHHHccccccccEEEccccccEEEEcccccEEHHHHcccccccccccccEEEEEEEEcccccccccccccccccccEEEEEEEEEEEEcccHHHHHHHHHHHcccCEECccccEEEEEEEEEEEEccEEEEEEccccccHHHHHHHHHHHHHHHHHHHHccccccccccccEEEEEEccEEEEEEccccEEEEccccHHcccc
MKTLKGAGQEVGRSCIMLEFKNKSIMMDCGIHPGLSGMDALPFVDLVESDQIDLLLISHFHLDHCGALPWFLLKTGFKGRCFMTHATKAIYRWLLSDYIKVSNISTEQMLYTESDLEKSMDKIETINFHEEKDVNGIKFSAYNAGHVLGAAMFLIEIAGVKILYTGDFSRQEDRHLMAAEIPPVKPDILITESTYGTHVHEQREEREGRFTSLIHDIVNRGGRCLIPVFALGRAQELLLILDEYWSLHPELHDIPIYYASSLAKKCMSVYQTYINAMNDRIRRQISINNPFVFKHISNLKGIDHFEDIGPCVVMASPGMMQSGLSRELFEMWCTDAKNGVIIAGYCVEGTLAKTILSEPEEVIGMSGQRLPLKMSVDYISFSAHTDYQQTSEFVRELRPAHVVLVHGEQNEMSRLKAALTREYEDDPNTSMELYNPRNTVSVDLYFKGEKTAKVMGELAVENLKPDAALSGIIVKRNFNYHLLAPSDLPKYTDLKASKIIQQQSVYYSGSISVLRSLISHLAGPVETLDEKRLRAFACIEITLEKCIVVLEWASNPISDMYADSLISECLIEILVEMYGEAAVPKMFKGEKITITVDKKKACIDLVDLSVQCEDSKL*****
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MKTLKGAGQEVGRSCIMLEFKNKSIMMDCGIHPGLSGMDALPFVDLVESDQIDLLLISHFHLDHCGALPWFLLKTGFKGRCFMTHATKAIYRWLLSDYIKVSNISTEQMLYTESDLEKSMDKIETINFHEEKDVNGIKFSAYNAGHVLGAAMFLIEIAGVKILYTGDFSRQEDRHLMAAEIPPVKPDILITESTYGTHVHEQREEREGRFTSLIHDIVNRGGRCLIPVFALGRAQELLLILDEYWSLHPELHDIPIYYASSLAKKCMSVYQTYINAMNDRIRRQISINNPFVFKHISNLKGIDHFEDIGPCVVMASPGMMQSGLSRELFEMWCTDAKNGVIIAGYCVEGTLAKTILSEPEEVIGMSGQRLPLKMSVDYISFSAHTDYQQTSEFVRELRPAHVVLVHGEQNEMSRLKAALTREYEDDPNTSMELYNPRNTVSVDLYFKGEKTAKVMGELAVENLKPDAALSGIIVKRNFNYHLLAPSDLPKYTDLKASKIIQQQSVYYSGSISVLRSLISHLAGPVETLDEKRLRAFACIEITLEKCIVVLEWASNPISDMYADSLISECLIEILVEMYGEAAVPKMFKGEKITITVDKKKACIDLVDLSVQCEDSKLKSTVQ

Function Prediction

Prediction of Gene Ontology Terms ?

GO Term ?Description ?Confidence Level ?Parent GO Terms ?
GO:0003677 [MF]DNA bindingconfidentGO:0097159, GO:0003674, GO:1901363, GO:0003676, GO:0005488
GO:0004521 [MF]endoribonuclease activityconfidentGO:0016787, GO:0004518, GO:0004519, GO:0004540, GO:0016788, GO:0003824, GO:0003674
GO:0022008 [BP]neurogenesisconfidentGO:0032502, GO:0048856, GO:0044707, GO:0007399, GO:0048869, GO:0030154, GO:0008150, GO:0032501, GO:0044763, GO:0048731, GO:0009987, GO:0007275, GO:0044699
GO:0006398 [BP]histone mRNA 3'-end processingconfidentGO:0008334, GO:0090304, GO:0034641, GO:0006807, GO:1901360, GO:0006139, GO:0044260, GO:0071704, GO:0010467, GO:0044238, GO:0031124, GO:0009987, GO:0006725, GO:0031123, GO:0008150, GO:0008152, GO:0046483, GO:0016070, GO:0016071, GO:0044237, GO:0043170, GO:0006396, GO:0006397
GO:0008409 [MF]5'-3' exonuclease activityconfidentGO:0016787, GO:0004518, GO:0004527, GO:0016788, GO:0003824, GO:0003674
GO:0005847 [CC]mRNA cleavage and polyadenylation specificity factor complexconfidentGO:0005849, GO:0031974, GO:0043229, GO:0043227, GO:0043226, GO:0005575, GO:0031981, GO:0005634, GO:0005654, GO:0044451, GO:0043234, GO:0032991, GO:0043231, GO:0043233, GO:0044464, GO:0005623, GO:0005622, GO:0044446, GO:0070013, GO:0044428, GO:0044424, GO:0044422
GO:0003723 [MF]RNA bindingconfidentGO:0097159, GO:0003674, GO:1901363, GO:0003676, GO:0005488
GO:0006378 [BP]mRNA polyadenylationprobableGO:0090304, GO:0034641, GO:0006807, GO:0043631, GO:1901360, GO:0006139, GO:0044260, GO:0071704, GO:0010467, GO:0044238, GO:0031124, GO:0009987, GO:0006725, GO:0031123, GO:0008150, GO:0008152, GO:0046483, GO:0016070, GO:0016071, GO:0044237, GO:0043170, GO:0006396, GO:0006397
GO:0006379 [BP]mRNA cleavageprobableGO:0016070, GO:0016071, GO:0044238, GO:0044260, GO:0006139, GO:0009987, GO:0006725, GO:0034641, GO:0044237, GO:0043170, GO:0090304, GO:0090305, GO:0010467, GO:0006807, GO:0008150, GO:1901360, GO:0008152, GO:0046483, GO:0071704, GO:0006396, GO:0006397
GO:0006369 [BP]termination of RNA polymerase II transcriptionprobableGO:0032774, GO:0090304, GO:0044249, GO:0034641, GO:0006807, GO:0034645, GO:1901362, GO:1901360, GO:1901576, GO:0044260, GO:0071704, GO:0010467, GO:0006366, GO:0018130, GO:0006139, GO:0009987, GO:0006725, GO:0009058, GO:0009059, GO:0008150, GO:0008152, GO:0034654, GO:0046483, GO:0016070, GO:0044238, GO:0044271, GO:0044237, GO:0043170, GO:0006351, GO:0006353, GO:0019438
GO:0005515 [MF]protein bindingprobableGO:0003674, GO:0005488
GO:0046872 [MF]metal ion bindingprobableGO:0043169, GO:0003674, GO:0005488, GO:0043167
GO:0034472 [BP]snRNA 3'-end processingprobableGO:0090304, GO:0034641, GO:0006807, GO:0034660, GO:1901360, GO:0016180, GO:0006139, GO:0044260, GO:0071704, GO:0010467, GO:0034470, GO:0009987, GO:0006725, GO:0031123, GO:0008150, GO:0008152, GO:0043628, GO:0046483, GO:0016070, GO:0044238, GO:0016073, GO:0044237, GO:0043170, GO:0006396
GO:0000398 [BP]mRNA splicing, via spliceosomeprobableGO:0090304, GO:0034641, GO:0006807, GO:1901360, GO:0006139, GO:0044260, GO:0071704, GO:0010467, GO:0008380, GO:0044238, GO:0009987, GO:0006725, GO:0000375, GO:0000377, GO:0008150, GO:0008152, GO:0046483, GO:0016070, GO:0016071, GO:0044237, GO:0043170, GO:0006396, GO:0006397
GO:0003729 [MF]mRNA bindingprobableGO:0097159, GO:0003674, GO:0005488, GO:0003676, GO:1901363, GO:0003723
GO:0030529 [CC]ribonucleoprotein complexprobableGO:0032991, GO:0044464, GO:0005623, GO:0005622, GO:0005575, GO:0044424
GO:0006406 [BP]mRNA export from nucleusprobableGO:0015931, GO:0051169, GO:0051168, GO:0016482, GO:0051028, GO:0044699, GO:0071705, GO:0071702, GO:0033036, GO:0006405, GO:0009987, GO:0006810, GO:0006913, GO:0044763, GO:0051649, GO:0051236, GO:0051234, GO:0051179, GO:0051641, GO:0050658, GO:0006403, GO:0046907, GO:0050657, GO:0008150
GO:0010014 [BP]meristem initiationprobableGO:0032502, GO:0048507, GO:0032501, GO:0044707, GO:0048856, GO:0009888, GO:0044767, GO:0009933, GO:0048513, GO:0008150, GO:0048731, GO:0009653, GO:0048532, GO:0007275, GO:0044699
GO:0010073 [BP]meristem maintenanceprobableGO:0032502, GO:0032501, GO:0044707, GO:0048856, GO:0009888, GO:0048507, GO:0048513, GO:0008150, GO:0048731, GO:0007275, GO:0044699
GO:0000278 [BP]mitotic cell cycleprobableGO:0008150, GO:0009987, GO:0044763, GO:0044699, GO:0007049
GO:0045787 [BP]positive regulation of cell cycleprobableGO:0051726, GO:0050794, GO:0065007, GO:0048518, GO:0008150, GO:0050789, GO:0048522
GO:0031507 [BP]heterochromatin assemblyprobableGO:0071103, GO:0022607, GO:0090304, GO:0034641, GO:0006807, GO:0016043, GO:0031497, GO:0044699, GO:0006139, GO:0044260, GO:0006325, GO:1901360, GO:0070828, GO:0006323, GO:0071704, GO:0071840, GO:0009987, GO:0006725, GO:0044763, GO:0008152, GO:0046483, GO:0006996, GO:0044238, GO:0051276, GO:0006338, GO:0006333, GO:0044237, GO:0043170, GO:0044085, GO:0006259, GO:0008150, GO:0016568
GO:0002119 [BP]nematode larval developmentprobableGO:0032502, GO:0032501, GO:0044707, GO:0009791, GO:0002164, GO:0008150, GO:0007275, GO:0044699
GO:0016246 [BP]RNA interferenceprobableGO:0010605, GO:0019222, GO:0035194, GO:0010608, GO:0009987, GO:0040029, GO:0050789, GO:0008150, GO:0060255, GO:0016458, GO:0065007, GO:0044763, GO:0031047, GO:0010629, GO:0048519, GO:0016441, GO:0009892, GO:0010468, GO:0044699
GO:0005829 [CC]cytosolprobableGO:0005737, GO:0044464, GO:0005623, GO:0005622, GO:0005575, GO:0044444, GO:0044424
GO:0009855 [BP]determination of bilateral symmetryprobableGO:0032502, GO:0007389, GO:0032501, GO:0044707, GO:0008150, GO:0009799, GO:0007275, GO:0044699
GO:0009792 [BP]embryo development ending in birth or egg hatchingprobableGO:0032502, GO:0032501, GO:0044707, GO:0048856, GO:0044767, GO:0009790, GO:0008150, GO:0007275, GO:0044699
GO:0006346 [BP]methylation-dependent chromatin silencingprobableGO:0009892, GO:0080090, GO:0009890, GO:0031327, GO:0031326, GO:0031324, GO:0031323, GO:0040029, GO:0010629, GO:0050789, GO:0044699, GO:0010605, GO:0019222, GO:0006325, GO:0006342, GO:2000112, GO:2000113, GO:0016043, GO:0008150, GO:0019219, GO:0016458, GO:0065007, GO:0071840, GO:0048519, GO:0045814, GO:0010468, GO:0045934, GO:0060255, GO:0009987, GO:0009889, GO:0050794, GO:0045892, GO:0051171, GO:0051172, GO:2001141, GO:0006996, GO:0051276, GO:0051253, GO:0051252, GO:0006355, GO:0010556, GO:0048523, GO:0044763, GO:0010558, GO:0016568, GO:0016569
GO:0040007 [BP]growthprobableGO:0008150

Prediction of Enzyme Commission Number ?

No confident prediction of EC number!

Spatial Structural Prediction

Structural Models Based on Templates

Template: 2I7T, chain A
Confidence level:very confident
Coverage over the Query: 2-259,293-447
View the alignment between query and template
View the model in PyMOL