Psyllid ID: psy8348

Local Sequence Feature Prediction

Prediction and (Method)	Result

Residue Number Marker

Protein Sequence

Secondary Structure (PSIPRED)

Secondary Structure Prediction (SSPRO)

Coil and Loop (DISEMBL)

Flexible Loop (DISEMBL)

Low Complexity Region (SEG)

Disordered region (IsUnstruct)

Disordered Region (DISOPRED)

Disordered Region (DISEMBL)

Disordered Region (DISPRO)

Transmembrane Helix (TMHMM)

Transmembrane Helix (HMMTOP)

Transmembrane Helix (MEMSAT)

TM Helix, Signal Peptide (MEMSAT_SVM)

TM Helix, Signal Peptide (Phobius)

Signal Peptide (SignalP HMM Mode)

Signal Peptide (SignalP NN Mode)

Coiled Coils (COILS)

Positional Conservation

--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620--

MKTLKGAGQEVGRSCIMLEFKNKSIMMDCGIHPGLSGMDALPFVDLVESDQIDLLLISHFHLDHCGALPWFLLKTGFKGRCFMTHATKAIYRWLLSDYIKVSNISTEQMLYTESDLEKSMDKIETINFHEEKDVNGIKFSAYNAGHVLGAAMFLIEIAGVKILYTGDFSRQEDRHLMAAEIPPVKPDILITESTYGTHVHEQREEREGRFTSLIHDIVNRGGRCLIPVFALGRAQELLLILDEYWSLHPELHDIPIYYASSLAKKCMSVYQTYINAMNDRIRRQISINNPFVFKHISNLKGIDHFEDIGPCVVMASPGMMQSGLSRELFEMWCTDAKNGVIIAGYCVEGTLAKTILSEPEEVIGMSGQRLPLKMSVDYISFSAHTDYQQTSEFVRELRPAHVVLVHGEQNEMSRLKAALTREYEDDPNTSMELYNPRNTVSVDLYFKGEKTAKVMGELAVENLKPDAALSGIIVKRNFNYHLLAPSDLPKYTDLKASKIIQQQSVYYSGSISVLRSLISHLAGPVETLDEKRLRAFACIEITLEKCIVVLEWASNPISDMYADSLISECLIEILVEMYGEAAVPKMFKGEKITITVDKKKACIDLVDLSVQCEDSKLKSTVQ

ccccccccccccccEEEEEEccEEEEEEcccccccccccccccccccccccccEEEEEcccccccccccHHHHHccccccccccHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHccEEEccccEEEEccEEEEcccccHHHHHHEEEEEEccEEEEEEccccccccccccccccccccccEEEEccccccccccccHHHHHHHHHHHHHHHHcccEEEEEcccHHHHHHHHHHHHHHHHHccccccccEEEEccHHHHHHHHHHHcHHHHcHHHHHHHHccccccccccEEEccHHHHcccccEEEEEccccccccHHHHHHHHccccccccEEEEcccccccHHHHHHcccccccEEcccEEEEEEEEEEEcccccccHHHHHHHHHHccccEEEEEcccHHHHHHHHHHHHHHHccccccccEEEccccccEEEEcccccEEHHHHcccccccccccccEEEEEEEEcccccccccccccccccccEEEEEEEEEEEEcccHHHHHHHHHHHcccEEEEccccEEEEEEEEEEEEccEEEEEEccccccHHHHHHHHHHHHHHHHHHHHccccccccccccEEEEEEccEEEEEEccccEEEEcccHHHcccc

cccEcccccccccEEEEEEEcccEEEEEccccccccccccccccccccHcHEcEEEEEcccHHHHHHHHHHHHHccccccEEcccHHHHHHHHHHHHHEEEcccccccccccHHHHHHHHccEEEEEccEEEEEccEEEEEccccHHHHHHHHHHHHcccEEEEEccccccccccccccccccccccEEEEEccccccccccHHHHHHHHHHHHHHHHHccccEEEEHHHHHHHHHHHHHHHHHHHHcHHHccccEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccEEEEEcccccHHHccccccEEEEEcccHcccccHHHHHHHHccccccEEEEEccEEHHHHHHHHHccccccEcccccEEcEEEEEEEEEEEccccHHHHHHHHHHcccccEEEEEccccHHHHHHHHHHHHHHccccccEEEEcccccEEEEEEccccEEEEEEEHHcccccccccEEEEEEEEEcccEEEEcHHHHHHHccccEEEEEEEEEEEccccHHHHHHHHHHHccccEEcccccEEEEEEEEEEEcccEEEEEEcccccHHHHHHHHHHHHHHHHHHHHHccccccccccccEEEEEEccEEEEEEccccEEEEccccHHHccc

mktlkgagqevgrscimlefknksimmdcgihpglsgmdalpfvdlvesdqIDLLLISHFhldhcgalpwfllktgfkgrcfmTHATKAIYRWLLSDYIKVSNISTEQMLYTESDLEKSMDKIETinfheekdvngikfsaynAGHVLGAAMFLIEIAGVKilytgdfsrqedrhlmaaeippvkpdilitestygthvheqreerEGRFTSLIHDIVNrggrclipVFALGRAQELLLILDEYwslhpelhdipIYYASSLAKKCMSVYQTYINAMNDRIRRqisinnpfvfkhisnlkgidhfedigpcvvmaspgmmqsglSRELFEMWCTDAKNGVIIAGYCVEGTLaktilsepeevigmsgqrlplkmsVDYIsfsahtdyqqTSEFVRELRPAHVVLVHGEQNEMSRLKAALTReyeddpntsmelynprntvsvdlyfkGEKTAKVMGELAVenlkpdaalsgiivkrnfnyhllapsdlpkytdlkaskiIQQQSVYYSGSISVLRSLISHlagpvetldEKRLRAFACIEITLEKCIVVLEWasnpisdmyaDSLISECLIEILVEMYgeaavpkmfkgekititvdkkkacIDLVDLSVqcedsklkstvq

mktlkgagqevgrSCIMLEFKNKSIMMDCGIHPGLSGMDALPFVDLVESDQIDLLLISHFHLDHCGALPWFLLKTGFKGRCFMTHATKAIYRWLLSDYIKVSNISTEQMLYTESDLEKSMDKIETINFheekdvngIKFSAYNAGHVLGAAMFLIEIAGVKILYTGDFSRQEDRHLMAaeippvkpdILITEStygthvheqreeregRFTSLIHDIVNRGGRCLIPVFALGRAQELLLILDEYWSLHPELHDIPIYYASSLAKKCMSVYQTYINAMNDRIRRQISINNPFVFKHISNLKGIDHFEDIGPCVVMASPGMMQSGLSRELFEMWCTDAKNGVIIAGYCVEGTLAKTILSEPEEVIGMSGQRLPLKMSVDYISFSAHTDYQQTSEFVRELRPAHVVlvhgeqnemSRLKAALTREYEddpntsmelynprntvsvDLYFKGEKTAKVMGELAVENLKPDAALSGIIVKRNFNYHLLAPSDLPKYTDLKASKIIQQQSVYYSGSISVLRSLISHLAGPVETLDEKRLRAFACIEITLEKCIVVLEWASNPISDMYADSLISECLIEILVEMYGEAAVPKMFKGEKITITVDKKKACIDLVdlsvqcedsklkstvq

***********GRSCIMLEFKNKSIMMDCGIHPGLSGMDALPFVDLVESDQIDLLLISHFHLDHCGALPWFLLKTGFKGRCFMTHATKAIYRWLLSDYIKVSNISTEQMLYTESDLE*SMDKIETINFHEEKDVNGIKFSAYNAGHVLGAAMFLIEIAGVKILYTGDFSRQEDRHLMAAEIPPVKPDILITESTYGTHVH******EGRFTSLIHDIVNRGGRCLIPVFALGRAQELLLILDEYWSLHPELHDIPIYYASSLAKKCMSVYQTYINAMNDRIRRQISINNPFVFKHISNLKGIDHFEDIGPCVVMASPGMMQSGLSRELFEMWCTDAKNGVIIAGYCVEGTLAKTILSEPEEVIGMSGQRLPLKMSVDYISFSAHTDYQQTSEFVRELRPAHVVLVHG**************************YNPRNTVSVDLYFKGEKTAKVMGELAVENLKPDAALSGIIVKRNFNYHLLAPSDLPKYTDLKASKIIQQQSVYYSGSISVLRSLISHLAGPVETLDEKRLRAFACIEITLEKCIVVLEWASNPISDMYADSLISECLIEILVEMYGEAAVPKMFKGEKITITVDKKKACIDLVDLSVQC**********

MKTLKGAGQEVGRSCIMLEFKNKSIMMDCGIHPGLSGMDALPFVDLVESDQIDLLLISHFHLDHCGALPWFLLKTGFKGRCFMTHATKAIYRWLLSDYIKVSNISTEQMLYTESDLEKSMDKIETINFHEEKDVNGIKFSAYNAGHVLGAAMFLIEIAGVKILYTGDFSRQEDRHLMAAEIPPVKPDILITESTYGTHVHEQREEREGRFTSLIHDIVNRGGRCLIPVFALGRAQELLLILDEYWSLHPELHDIPIYYASSLAKKCMSVYQTYINAMNDRIRRQISINNPFVFKHISNLK******DIGPCVVMASPGMMQSGLSRELFEMWCTDAKNGVIIAGYCVEGTLAKTILSEPEEVIGMSGQRLPLKMSVDYISFSAHTDYQQTSEFVRELRPAHVVLVHGEQNEMSRLKAALTREYEDDPNTSMELYNPRNTVSVDLYFKGEK*********************IIVKRNFNYHLLAPSDLPKYTDLKASKIIQQQSVYYSGSISVLRSLISHLAGPVETLDEKRLRAFACIEITLEKCIVVLEWASNPISDMYADSLISECLIEILVEMYGEAAVP**FKGEKITITVDKKKACIDLVDLSVQCEDSKLKS***

*********EVGRSCIMLEFKNKSIMMDCGIHPGLSGMDALPFVDLVESDQIDLLLISHFHLDHCGALPWFLLKTGFKGRCFMTHATKAIYRWLLSDYIKVSNISTEQMLYTESDLEKSMDKIETINFHEEKDVNGIKFSAYNAGHVLGAAMFLIEIAGVKILYTGDFSRQEDRHLMAAEIPPVKPDILITESTY**********REGRFTSLIHDIVNRGGRCLIPVFALGRAQELLLILDEYWSLHPELHDIPIYYASSLAKKCMSVYQTYINAMNDRIRRQISINNPFVFKHISNLKGIDHFEDIGPCVVMASPGMMQSGLSRELFEMWCTDAKNGVIIAGYCVEGTLAKTILSEPEEVIGMSGQRLPLKMSVDYISFSAHTDYQQTSEFVRELRPAHVVLVHGEQNEMSRLKAALTREYEDDPNTSMELYNPRNTVSVDLYFKGEKTAKVMGELAVENLKPDAALSGIIVKRNFNYHLLAPSDLPKYTDLKASKIIQQQSVYYSGSISVLRSLISHLAGPVETLDEKRLRAFACIEITLEKCIVVLEWASNPISDMYADSLISECLIEILVEMYGEAAVPKMFKGEKITITVDKKKACIDLVDLSVQCE*********

oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo

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no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

No hits with e-value below 0.001 by BLAST

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Alignment graph	Length	Definition	Q cover	H cover	Identity	E-value
Query		622
FB\|FBgn0261065		684	Cpsf73 "Cleavage and polyadeny	0.909	0.827	0.762	1.2e-256
UNIPROTKB\|E2R7R2		717	CPSF3 "Uncharacterized protein	0.964	0.836	0.708	1.9e-236
UNIPROTKB\|P79101		684	CPSF3 "Cleavage and polyadenyl	0.964	0.877	0.708	2.4e-236
UNIPROTKB\|I3LKR1		687	CPSF3 "Uncharacterized protein	0.964	0.873	0.704	3.5e-235
UNIPROTKB\|F1NKW5		685	CPSF3 "Uncharacterized protein	0.977	0.887	0.693	1.2e-234
ZFIN\|ZDB-GENE-030131-3275		690	cpsf3 "cleavage and polyadenyl	0.982	0.885	0.692	7.3e-233
UNIPROTKB\|Q9UKF6		684	CPSF3 "Cleavage and polyadenyl	0.985	0.896	0.697	1.1e-231
MGI\|MGI:1859328		684	Cpsf3 "cleavage and polyadenyl	0.985	0.896	0.692	4.6e-231
UNIPROTKB\|G3V6W7		685	Cpsf3 "Protein Cpsf3" [Rattus	0.985	0.894	0.692	4.6e-231
RGD\|1305767		685	Cpsf3 "cleavage and polyadenyl	0.985	0.894	0.691	9.6e-231

FB\|FBgn0261065 Cpsf73 "Cleavage and polyadenylation specificity factor 73" [Drosophila melanogaster (taxid:7227)]	Back alignment and assigned GO terms

 Score = 2368 (838.6 bits), Expect = 1.2e-256, Sum P(2) = 1.2e-256
 Identities = 434/569 (76%), Positives = 510/569 (89%)

Query:     6 GAGQEVGRSCIMLEFKNKSIMMDCGIHPGLSGMDALPFVDLVESDQIDLLLISHFHLDHC 65
             GAGQEVGRSCIMLEFK K IM+DCGIHPGLSGMDALP+VDL+E+D+IDLL ISHFHLDHC
Sbjct:    24 GAGQEVGRSCIMLEFKGKKIMLDCGIHPGLSGMDALPYVDLIEADEIDLLFISHFHLDHC 83

Query:    66 GALPWFLLKTGFKGRCFMTHATKAIYRWLLSDYIKVSNISTEQMLYTESDLEKSMDKIET 125
             GALPWFL+KT FKGRCFMTHATKAIYRW+LSDYIK+SNISTEQMLYTE+DLE SM+KIET
Sbjct:    84 GALPWFLMKTSFKGRCFMTHATKAIYRWMLSDYIKISNISTEQMLYTEADLEASMEKIET 143

Query:   126 INFHEEKDVNGIKFSAYNAGHVLGAAMFLIEIAGVKILYTGDFSRQEDRHLMAAEIPPVK 185
             INFHEE+DV G++F AY AGHVLGAAMF+IEIAG+KILYTGDFSRQEDRHLMAAE+PP+K
Sbjct:   144 INFHEERDVMGVRFCAYIAGHVLGAAMFMIEIAGIKILYTGDFSRQEDRHLMAAEVPPMK 203

Query:   186 PDILITESTYGTHVHEQREEREGRFTSLIHDIVNRGGRCLIPVFALGRAQELLLILDEYW 245
             PD+LITESTYGTH+HE+RE+RE RFTSL+  IV +GGRCLIPVFALGRAQELLLILDE+W
Sbjct:   204 PDVLITESTYGTHIHEKREDRENRFTSLVQKIVQQGGRCLIPVFALGRAQELLLILDEFW 263

Query:   246 SLHPELHDIPIYYASSLAKKCMSVYQTYINAMNDRIRRQISINNPFVFKHISNLKGIDHF 305
             S +P+LH+IPIYYASSLAKKCM+VYQTYINAMNDRIRRQI++NNPFVF+HISNLKGIDHF
Sbjct:   264 SQNPDLHEIPIYYASSLAKKCMAVYQTYINAMNDRIRRQIAVNNPFVFRHISNLKGIDHF 323

Query:   306 EDIGPCVVMASPGMMQSGLSRELFEMWCTDAKNGVIIAGYCVEGTLAKTILSEPEEVIGM 365
             EDIGPCV+MASPGMMQSGLSRELFE WCTD KNGVIIAGYCVEGTLAK +LSEPEE+  +
Sbjct:   324 EDIGPCVIMASPGMMQSGLSRELFESWCTDPKNGVIIAGYCVEGTLAKAVLSEPEEITTL 383

Query:   366 SGQRLPLKMSVDYISFSAHTDYQQTSEFVRELRPAHVVLVHGEQNEMSRLKAALTREYED 425
             SGQ+LPL MSVDYISFSAHTDYQQTSEF+R L+P HVVLVHGEQNEMSRLK AL REYE 
Sbjct:   384 SGQKLPLNMSVDYISFSAHTDYQQTSEFIRLLKPTHVVLVHGEQNEMSRLKLALQREYEA 443

Query:   426 DPNTSMELYNPRNTVSVDLYFKGEKTAKVMGELAVENLKPDAALSGIIVKRNFNYHLLAP 485
             D +T ++ YNPRNT +VDLYF+GEKTAKVMG LA +N +  + LSG++VKR+F YHLLAP
Sbjct:   444 DASTDIKFYNPRNTHAVDLYFRGEKTAKVMGSLAAKNSEVGSKLSGVLVKRDFKYHLLAP 503

Query:   486 SDLPKYTDLKASKIIQQQSVYYSGSISVLRSLISHL-AGPVETLD-EKRLRAFACIEITL 543
             SDL KYTD+  S + Q+QS+ +  S+S L  L+  + AG VE L+ E++LR F CIE+T+
Sbjct:   504 SDLGKYTDMSMSVVTQRQSIPWGSSLSTLELLLDRIGAGCVEVLEAERKLRVFGCIELTV 563

Query:   544 EKCIVVLEWASNPISDMYADSLISECLIE 572
             E+ I+V+EW +  ++D+YAD++++ C+++
Sbjct:   564 EQKIIVMEWQATHVNDVYADAVLA-CIMQ 591

GO:0006379 "mRNA cleavage" evidence=ISS

GO:0005847 "mRNA cleavage and polyadenylation specificity factor complex" evidence=ISS;NAS

GO:0006378 "mRNA polyadenylation" evidence=ISS;IMP

GO:0016787 "hydrolase activity" evidence=IEA

GO:0006398 "histone mRNA 3'-end processing" evidence=IMP

GO:0003677 "DNA binding" evidence=IDA

GO:0022008 "neurogenesis" evidence=IMP

UNIPROTKB\|E2R7R2 CPSF3 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]	Back alignment and assigned GO terms

UNIPROTKB\|P79101 CPSF3 "Cleavage and polyadenylation specificity factor subunit 3" [Bos taurus (taxid:9913)]	Back alignment and assigned GO terms

UNIPROTKB\|I3LKR1 CPSF3 "Uncharacterized protein" [Sus scrofa (taxid:9823)]	Back alignment and assigned GO terms

UNIPROTKB\|F1NKW5 CPSF3 "Uncharacterized protein" [Gallus gallus (taxid:9031)]	Back alignment and assigned GO terms

ZFIN\|ZDB-GENE-030131-3275 cpsf3 "cleavage and polyadenylation specific factor 3" [Danio rerio (taxid:7955)]	Back alignment and assigned GO terms

UNIPROTKB\|Q9UKF6 CPSF3 "Cleavage and polyadenylation specificity factor subunit 3" [Homo sapiens (taxid:9606)]	Back alignment and assigned GO terms

MGI\|MGI:1859328 Cpsf3 "cleavage and polyadenylation specificity factor 3" [Mus musculus (taxid:10090)]	Back alignment and assigned GO terms

UNIPROTKB\|G3V6W7 Cpsf3 "Protein Cpsf3" [Rattus norvegicus (taxid:10116)]	Back alignment and assigned GO terms

RGD\|1305767 Cpsf3 "cleavage and polyadenylation specific factor 3, 73kDa" [Rattus norvegicus (taxid:10116)]	Back alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	3.1.27	0.691

Prediction of Functionally Associated Proteins

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Alignment Graph	Length	Definition	E-value
Query		622
COG1236		427	COG1236, YSH1, Predicted exonuclease of the beta-l	1e-141
TIGR03675		630	TIGR03675, arCOG00543, arCOG00543 universal archae	7e-88
COG1782		637	COG1782, COG1782, Predicted metal-dependent RNase,	7e-85
smart01027		126	smart01027, Beta-Casp, Beta-Casp domain	2e-42
pfam11718		208	pfam11718, CPSF73-100_C, Pre-mRNA 3'-end-processin	2e-37
pfam10996		124	pfam10996, Beta-Casp, Beta-Casp domain	2e-35
smart01098		212	smart01098, CPSF73-100_C, This is the C-terminal c	7e-26
TIGR04122		326	TIGR04122, Xnuc_lig_assoc, putative exonuclease, D	3e-19
pfam00753		148	pfam00753, Lactamase_B, Metallo-beta-lactamase sup	9e-13
smart00849		177	smart00849, Lactamase_B, Metallo-beta-lactamase su	2e-12
COG0595		555	COG0595, COG0595, mRNA degradation ribonucleases J	4e-10
pfam07521		43	pfam07521, RMMBL, RNA-metabolising metallo-beta-la	9e-10
pfam12706		197	pfam12706, Lactamase_B_2, Beta-lactamase superfami	1e-08
COG1234		292	COG1234, ElaC, Metal-dependent hydrolases of the b	3e-06
PRK00055		270	PRK00055, PRK00055, ribonuclease Z; Reviewed	7e-05
TIGR02651		299	TIGR02651, RNase_Z, ribonuclease Z	7e-05
COG0491		252	COG0491, GloB, Zn-dependent hydrolases, including	8e-05
COG2220		258	COG2220, COG2220, Predicted Zn-dependent hydrolase	7e-04
COG1237		259	COG1237, COG1237, Metal-dependent hydrolases of th	0.001
TIGR00649		422	TIGR00649, MG423, conserved hypothetical protein	0.002

>gnl\|CDD\|224157 COG1236, YSH1, Predicted exonuclease of the beta-lactamase fold involved in RNA processing [Translation, ribosomal structure and biogenesis]	Back alignment and domain information

 Score =  415 bits (1069), Expect = e-141
 Identities = 165/439 (37%), Positives = 238/439 (54%), Gaps = 18/439 (4%)

Query: 6   GAGQEVGRSCIMLEFKNKSIMMDCGIHPGLSGMDALPFVDLVESDQIDLLLISHFHLDHC 65
           GA +EVGRSC++LE     I++DCG+ PG       P +      ++D +L++H HLDH 
Sbjct: 7   GAAREVGRSCVLLETGGTRILLDCGLFPG-DPSPERPLLP--PFPKVDAVLLTHAHLDHI 63

Query: 66  GALPWFLLKTGFKGRCFMTHATKAIYRWLLSDYIKVSNISTEQMLYTESDLEKSMDKIET 125
           GALP+ +   GF+G  + T  T A+ + LL D +K++    +   Y+E D+E+  D I  
Sbjct: 64  GALPYLVRN-GFEGPVYATPPTAALLKVLLGDSLKLAEGPDKP-PYSEEDVERVPDLIRP 121

Query: 126 INFHEEKDVNGIKFSAYNAGHVLGAAMFLIEIAGVKILYTGDFSRQEDRHLMAAEIPPVK 185
           + + E  +V G+K + YNAGH+LG+A  L+E+ G +ILYTGD  R++DR L  AE+PP  
Sbjct: 122 LPYGEPVEVGGVKVTFYNAGHILGSAAILLEVDGGRILYTGDVKRRKDRLLNGAELPP-C 180

Query: 186 PDILITESTYGTHVHEQREEREGRFTSLIHDIVNRGGRCLIPVFALGRAQELLLILDEYW 245
            D+LI ESTYG  +H  R+E E RF   +   + RGG  LIP FALGRAQELLLIL E  
Sbjct: 181 IDVLIVESTYGDRLHPNRDEVERRFIESVKAALERGGTVLIPAFALGRAQELLLILRELG 240

Query: 246 SLHPELHDIPIYYASSLAKKCMSVYQTYINAMNDRIRRQISINNPFVFKHISNLKGIDHF 305
                  D PIY    +A+  ++  +  I      + +             S    +   
Sbjct: 241 F----AGDYPIYVDGPIARVALAYAKYPIGLDLPDLLKVAESR---FRFVESRRNSMREG 293

Query: 306 EDIGPCVVMASPGMMQSGLSRELFEMWCTDAKNGVIIAGYCVEGTLAKTILSEPEEVIGM 365
            D GP VV+A+PGM++ G SR   +   +D KN V++ GY  EGTL + +L     V   
Sbjct: 294 IDKGPAVVLAAPGMLKGGRSRYYLKHLLSDEKNWVLLPGYQAEGTLGRVLLEGGTSVHIK 353

Query: 366 SGQRLPLKMSVDYISFSAHTDYQQTSEFVRELRPAHVVLVHGEQNEMSRLKAALTREYED 425
            G  + +K  V+ + FSAH D  +  EF++++ P  VVLVHGE    + L+A L  E   
Sbjct: 354 -GIEIKVKARVEELDFSAHADGDELLEFIKDISPPKVVLVHGEPEYGAALRARLLEELIG 412

Query: 426 DPNTSMELYNPRNTVSVDL 444
                 EL  P N    +L
Sbjct: 413 IR----ELELPANGEEYEL 427

Length = 427

>gnl\|CDD\|188365 TIGR03675, arCOG00543, arCOG00543 universal archaeal KH-domain/beta-lactamase-domain protein	Back alignment and domain information

>gnl\|CDD\|224696 COG1782, COG1782, Predicted metal-dependent RNase, consists of a metallo-beta-lactamase domain and an RNA-binding KH domain [General function prediction only]	Back alignment and domain information

>gnl\|CDD\|214983 smart01027, Beta-Casp, Beta-Casp domain	Back alignment and domain information

>gnl\|CDD\|221184 pfam11718, CPSF73-100_C, Pre-mRNA 3'-end-processing endonuclease polyadenylation factor C-term	Back alignment and domain information

>gnl\|CDD\|220932 pfam10996, Beta-Casp, Beta-Casp domain	Back alignment and domain information

>gnl\|CDD\|215023 smart01098, CPSF73-100_C, This is the C-terminal conserved region of the pre-mRNA 3'-end-processing of the polyadenylation factor CPSF-73/CPSF-100 proteins	Back alignment and domain information

>gnl\|CDD\|200373 TIGR04122, Xnuc_lig_assoc, putative exonuclease, DNA ligase-associated	Back alignment and domain information

>gnl\|CDD\|216099 pfam00753, Lactamase_B, Metallo-beta-lactamase superfamily	Back alignment and domain information

>gnl\|CDD\|214854 smart00849, Lactamase_B, Metallo-beta-lactamase superfamily	Back alignment and domain information

>gnl\|CDD\|223668 COG0595, COG0595, mRNA degradation ribonucleases J1/J2 (metallo-beta-lactamase superfamily) [Translation, ribosomal structure and biogenesis; Replication, recombination and repair]	Back alignment and domain information

>gnl\|CDD\|203663 pfam07521, RMMBL, RNA-metabolising metallo-beta-lactamase	Back alignment and domain information

>gnl\|CDD\|221727 pfam12706, Lactamase_B_2, Beta-lactamase superfamily domain	Back alignment and domain information

>gnl\|CDD\|224155 COG1234, ElaC, Metal-dependent hydrolases of the beta-lactamase superfamily III [General function prediction only]	Back alignment and domain information

>gnl\|CDD\|234602 PRK00055, PRK00055, ribonuclease Z; Reviewed	Back alignment and domain information

>gnl\|CDD\|233963 TIGR02651, RNase_Z, ribonuclease Z	Back alignment and domain information

>gnl\|CDD\|223565 COG0491, GloB, Zn-dependent hydrolases, including glyoxylases [General function prediction only]	Back alignment and domain information

>gnl\|CDD\|225130 COG2220, COG2220, Predicted Zn-dependent hydrolases of the beta-lactamase fold [General function prediction only]	Back alignment and domain information

>gnl\|CDD\|224158 COG1237, COG1237, Metal-dependent hydrolases of the beta-lactamase superfamily II [General function prediction only]	Back alignment and domain information

>gnl\|CDD\|233071 TIGR00649, MG423, conserved hypothetical protein	Back alignment and domain information

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Alignment Graph	Length	Definition	Probability
Query		622
KOG1137\|consensus		668		100.0
KOG1136\|consensus		501		100.0
COG1782		637	Predicted metal-dependent RNase, consists of a met	100.0
TIGR03675		630	arCOG00543 arCOG00543 universal archaeal KH-domain	100.0
COG1236		427	YSH1 Predicted exonuclease of the beta-lactamase f	100.0
KOG1135\|consensus		764		100.0
TIGR00649		422	MG423 conserved hypothetical protein. Contains an	100.0
KOG1138\|consensus		653		100.0
PF11718		216	CPSF73-100_C: Pre-mRNA 3'-end-processing endonucle	100.0
COG0595		555	mRNA degradation ribonucleases J1/J2 (metallo-beta	100.0
PF10996		126	Beta-Casp: Beta-Casp domain; InterPro: IPR022712 T	99.87
KOG1361\|consensus		481		99.79
PRK11244		250	phnP carbon-phosphorus lyase complex accessory pro	99.77
TIGR02651		299	RNase_Z ribonuclease Z. Processing of the 3-prime	99.77
TIGR02649		303	true_RNase_BN ribonuclease BN. Members of this pro	99.75
TIGR03307		238	PhnP phosphonate metabolism protein PhnP. This fam	99.74
PRK00055		270	ribonuclease Z; Reviewed	99.66
PRK02113		252	putative hydrolase; Provisional	99.65
PRK05184		302	pyrroloquinoline quinone biosynthesis protein PqqB	99.61
TIGR02108		302	PQQ_syn_pqqB coenzyme PQQ biosynthesis protein B.	99.61
smart00849		183	Lactamase_B Metallo-beta-lactamase superfamily. Ap	99.61
PRK02126		334	ribonuclease Z; Provisional	99.59
PF12706		194	Lactamase_B_2: Beta-lactamase superfamily domain;	99.58
COG1234		292	ElaC Metal-dependent hydrolases of the beta-lactam	99.57
PRK00685		228	metal-dependent hydrolase; Provisional	99.55
PRK11921		394	metallo-beta-lactamase/flavodoxin domain-containin	99.49
PF00753		194	Lactamase_B: Metallo-beta-lactamase superfamily; I	99.44
TIGR02650		277	RNase_Z_T_toga ribonuclease Z, Thermotoga type. Me	99.43
PRK04286		298	hypothetical protein; Provisional	99.43
PRK11709		355	putative L-ascorbate 6-phosphate lactonase; Provis	99.29
PRK05452		479	anaerobic nitric oxide reductase flavorubredoxin;	99.27
COG2333		293	ComEC Predicted hydrolase (metallo-beta-lactamase	99.27
TIGR03413		248	GSH_gloB hydroxyacylglutathione hydrolase. Members	99.25
PF07521		43	RMMBL: RNA-metabolising metallo-beta-lactamase; In	99.22
COG0426		388	FpaA Uncharacterized flavoproteins [Energy product	99.17
PRK11539		755	ComEC family competence protein; Provisional	99.17
TIGR00361		662	ComEC_Rec2 DNA internalization-related competence	99.17
KOG2121\|consensus		746		99.16
PLN02469		258	hydroxyacylglutathione hydrolase	99.15
PLN02398		329	hydroxyacylglutathione hydrolase	99.09
COG0491		252	GloB Zn-dependent hydrolases, including glyoxylase	99.08
PLN02962		251	hydroxyacylglutathione hydrolase	99.08
PRK10241		251	hydroxyacylglutathione hydrolase; Provisional	99.05
PF13483		163	Lactamase_B_3: Beta-lactamase superfamily domain;	99.03
KOG0813\|consensus		265		98.84
COG2220		258	Predicted Zn-dependent hydrolases of the beta-lact	98.83
COG1237		259	Metal-dependent hydrolases of the beta-lactamase s	98.79
COG2248		304	Predicted hydrolase (metallo-beta-lactamase superf	98.73
COG1235		269	PhnP Metal-dependent hydrolases of the beta-lactam	98.64
PF02112		335	PDEase_II: cAMP phosphodiesterases class-II; Inter	98.58
KOG0814\|consensus		237		97.49
PF07522		110	DRMBL: DNA repair metallo-beta-lactamase; InterPro	97.1
COG5212		356	PDE1 Low-affinity cAMP phosphodiesterase [Signal t	97.03
PF14597		199	Lactamase_B_5: Metallo-beta-lactamase superfamily;	96.63
PF13691		63	Lactamase_B_4: tRNase Z endonuclease	96.1
KOG3798\|consensus		343		95.8
KOG4736\|consensus		302		94.97
COG2015		655	Alkyl sulfatase and related hydrolases [Secondary	92.06
KOG1137\|consensus		668		89.72
KOG3592\|consensus		934		84.39

>KOG1137\|consensus	Back alignment and domain information

Probab=100.00  E-value=1.1e-142  Score=1110.38  Aligned_cols=613  Identities=57%  Similarity=0.939  Sum_probs=590.3

Q ss_pred             cEecCCCCCCCCcEEEEEECCeEEEEeCCCCCCCCCCCCCCCCCCCCCCCccEEEcCCCchhhhcchHHHHHhcCCCCeE
Q psy8348           2 KTLKGAGQEVGRSCIMLEFKNKSIMMDCGIHPGLSGMDALPFVDLVESDQIDLLLISHFHLDHCGALPWFLLKTGFKGRC   81 (622)
Q Consensus         2 v~~LG~g~evG~sc~lI~~~~~~ILiD~G~~~~~~~~~~lp~~~~~~~~~Id~IlITH~H~DHiggLp~l~~~~~~~~~I   81 (622)
                      ++|||+|+||||||++++++|++||+|||.||++++..++|+++.++++.||.++|||+|+||+++|||+++++.|.+++
T Consensus        16 ~~pLGag~EVGRSC~ile~kGk~iMld~gvhpaysg~aslpf~d~vd~s~id~llIthFhldh~aslp~~~qkTsf~grv   95 (668)
T KOG1137|consen   16 FTPLGAGNEVGRSCHILEYKGKTIMLDCGVHPAYSGMASLPFYDEVDLSAIDPLLITHFHLDHAASLPFTLQKTSFIGRV   95 (668)
T ss_pred             EEECCCCcccCceEEEEEecCeEEEeccccCccccccccccchhhcccccccHHHHhhhhhhhcccccceeeecccccee
Confidence            68999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             EechhhHHHHHHHHHhHHhhhcccccccCCCHHHHHHhhcccEEecCCCeEEeCCEEEEEEeCCCCCCcEEEEEEECCEE
Q psy8348          82 FMTHATKAIYRWLLSDYIKVSNISTEQMLYTESDLEKSMDKIETINFHEEKDVNGIKFSAYNAGHVLGAAMFLIEIAGVK  161 (622)
Q Consensus        82 y~t~~t~~i~~~~l~d~~~~~~~~~~~~ly~~~di~~~~~~i~~i~~~~~~~i~gi~v~~~~aGH~~Gs~~~~I~~~~~~  161 (622)
                      |||++|+++++|++.||+++.+.+.+..+|++.|+.++++++++++|+++.+++|++|++|.+||++|+|||++++.+.+
T Consensus        96 fmth~TkAi~kwllsdyvrvs~~s~~~~Ly~e~dl~~s~dKie~idfhe~~ev~gIkf~p~~aGhVlgacMf~veiagv~  175 (668)
T KOG1137|consen   96 FMTHPTKAIYKWLLSDYVRVSNRSGDDRLYTEGDLMESMDKIETIDFHETVEVNGIKFWPYHAGHVLGACMFMVEIAGVR  175 (668)
T ss_pred             EEecchHHHHHhhhhcceEeeeccCccccccchhHHHhhhhheeeeeccccccCCeEEEeeccchhhhheeeeeeeceEE
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             EEEEcCCCCCccccccccCCCCCCCcEEEEcccCCCCCCchhhhHHHHHHHHHHHHHHcCCeEEEeecccchHHHHHHHH
Q psy8348         162 ILYTGDFSRQEDRHLMAAEIPPVKPDILITESTYGTHVHEQREEREGRFTSLIHDIVNRGGRCLIPVFALGRAQELLLIL  241 (622)
Q Consensus       162 IlytGD~~~~~~~~l~~a~~~~~~~DvLI~EsTyg~~~~~~~~~~~~~~~~~i~~~l~~gg~vliP~falGR~qEll~iL  241 (622)
                      ++|||||+++.|+|+..++.|+.++|++|+|||||...|.+|.+|+.+|.+.|+.++.+|||||+|+||+||+|||+++|
T Consensus       176 lLyTGd~sreeDrhl~aae~P~~~~dvli~estygv~~h~~r~~re~rlt~vIh~~v~rGGR~L~PvFAlgrAqELllil  255 (668)
T KOG1137|consen  176 LLYTGDYSREEDRHLIAAEMPPTGPDVLITESTYGVQIHEPREEREGRLTWVIHSTVPRGGRVLIPVFALGRAQELLLIL  255 (668)
T ss_pred             EEeccccchhhcccccchhCCCCCccEEEEEeeeeEEecCchHHhhhhhhhhHHhhccCCCceEeeeeecchHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHhCCCCCCccEEEECchHHHHHHHHHHhHHhhhHHHHHHHhcCCCcccccccccccccccccCCCeEEEecCCCCC
Q psy8348         242 DEYWSLHPELHDIPIYYASSLAKKCMSVYQTYINAMNDRIRRQISINNPFVFKHISNLKGIDHFEDIGPCVVMASPGMMQ  321 (622)
Q Consensus       242 ~~~~~~~~~l~~ipI~~~s~~a~~~~~~y~~~~~~~~~~i~~~~~~~npf~f~~i~~l~~~~~~~~~~p~Vvias~gml~  321 (622)
                      ++||.+|++++++||||+|++|++||++||+|++.||++|++++..+|||.|+|++++++.+.|+|.||||++|||||+|
T Consensus       256 deyw~~h~~l~~iPiyyaSslakkcm~vfQtyv~~mnd~Irk~~~~~Npfifk~vs~L~~~D~f~D~gP~vv~aspgmlq  335 (668)
T KOG1137|consen  256 DEYWGNHVDLRDIPIYYASSLAKKCMGVFQTYVNMMNDRIRKQSALRNPFIFKHVSILRTGDWFDDEGPSVVMASPGMLQ  335 (668)
T ss_pred             HHHhhcchhhhcCceeehhhHHHhhhhhHheehhhhhhhhHHhhccCCceEeeccccccccccccccCCceeEeCchHhh
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cchHHHHHHHHcCCCCCeEEEeccCCCCCcccccccCCceeeeccCeEeeceeeEEEEecccCCCHHHHHHHHHHhCCCe
Q psy8348         322 SGLSRELFEMWCTDAKNGVIIAGYCVEGTLAKTILSEPEEVIGMSGQRLPLKMSVDYISFSAHTDYQQTSEFVRELRPAH  401 (622)
Q Consensus       322 ~G~s~~~l~~~~~d~~n~vil~gy~~~gt~~~~l~~~~~~~~~~~g~~i~~~~~v~~i~fS~Had~~el~~~i~~l~P~~  401 (622)
                      +|.||++|++||+|++|+|+++|||++||+|+.++++|+++..++|+++|++|+|++++||+|.||.|..+|++.++|+|
T Consensus       336 sglSRelfe~wcsD~kN~vlipGy~Vegtlak~il~eP~eI~a~~G~klp~~m~V~~isFaAhvdy~q~s~fi~~i~~~~  415 (668)
T KOG1137|consen  336 SGLSRELFERWCSDSKNAVLIPGYCVEGTLAKDILSEPKEIMAMNGRKLPLRMQVEYISFAAHVDYLQNSEFIADITPPH  415 (668)
T ss_pred             hhhhHHHHHHhCCCCCCcEEeccceechhHHHHHhcCchhhhcccCCcccccceEEEEEeeechhhhhhHHHHHHhCCCe
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             EEEEcCChHHHHHHHHHHHHhhcCCCCCceEEeeCCCCcEEEEeecceehhhhhcccccccCCCCceEEEEEEeeCCeeE
Q psy8348         402 VVLVHGEQNEMSRLKAALTREYEDDPNTSMELYNPRNTVSVDLYFKGEKTAKVMGELAVENLKPDAALSGIIVKRNFNYH  481 (622)
Q Consensus       402 VilvHGe~~~~~~l~~~l~~~~~~~~~~~~~v~~p~ng~~v~l~~~~~~~~~~~g~~~~~~~~~~~~~~g~l~~~~~~~~  481 (622)
                      +|+||||.++|.+||++|..+|...+ .++++++|+||+.++++|++++.||++|++|. .|++ .+++|+|+++|++|.
T Consensus       416 lilVHGE~neM~rLKs~L~~~f~d~k-v~i~v~tprn~e~v~l~f~~eklak~~G~~a~-~p~~-~~~sgiLv~~~~~~~  492 (668)
T KOG1137|consen  416 LILVHGEANEMMRLKSALEAAFRDGK-VPIDVSTPRNCEDVELYFPGEKLAKTTGSLAE-VPKE-DRVSGILVSYGFSYA  492 (668)
T ss_pred             EEEEecccchhHHHHHHHHHHhccCC-CcceecCCccceEeeeecCcchhhhhhhcccc-CCcc-ceEEEEEEecCCcee
Confidence            99999999999999999999997654 57899999999999999999999999999998 6665 899999999999999


Q ss_pred             EeCCCCCCcccCcceeEEEEEEEEEeeccHHHHHHHHHhccCCeeeecc-ceEEEeeeEEEEEeCc-EEEEEEeecCCch
Q psy8348         482 LLAPSDLPKYTDLKASKIIQQQSVYYSGSISVLRSLISHLAGPVETLDE-KRLRAFACIEITLEKC-IVVLEWASNPISD  559 (622)
Q Consensus       482 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~-~~~~~~~~~~~~~~~~-~~~~~w~~~~~~d  559 (622)
                      |++|+||..|++|+++.++|||.+||.+++.++.|+|.|++..+.+.++ ..++|++.++|...+. .+.+||.++++||
T Consensus       493 ils~edL~~ys~l~~~~~~erq~i~~~~~~~li~~~l~~~~~e~~e~s~~~a~~v~~vi~v~~~q~~~ivlEw~~~~~~D  572 (668)
T KOG1137|consen  493 ILSPEDLILYSDLKTIPLNERQVIPYMGRIALIGPNLIQGKNEMLETSKKHAYRVELVIKVVKPQEFPIVLEWLSNPEND  572 (668)
T ss_pred             eccHHHhhhhhhheeeeccceEEEeccccHHhhhhHHHhcchhhhhcccCcceEEEeEEEEeccCCceEEEEeccCchhh
Confidence            9999999999999999999999999999999999999999776655555 5899999999999875 8999999999999


Q ss_pred             hHhhHHH-------------------------HHHHHHHHHHHhCCCccccCCCCceEEEEECCeEEEEEcCCceEEeCC
Q psy8348         560 MYADSLI-------------------------SECLIEILVEMYGEAAVPKMFKGEKITITVDKKKACIDLVDLSVQCED  614 (622)
Q Consensus       560 ~~ad~~~-------------------------~~~~~~~~~~~fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~  614 (622)
                      |+|||+.                         .++|..+|+.||||+++.   +...+..++|+..|.|+.++. ++- |
T Consensus       573 ~~adSi~~~il~v~~~pks~kl~~~k~~~~~~~k~l~~~l~~~fg~~~~~---e~~~~~~~~~~~~~~~~~~s~-~~~-~  647 (668)
T KOG1137|consen  573 MLADSIGARILTVSLSPKSVKLMVDKCDEVERKKLLESLLKNQFGDDKTN---EYGILVMEVDGMVARISGSSV-MKI-D  647 (668)
T ss_pred             hhHhhhhheeeecccCCcceEeeecccchHHHHHHHHHHHHHHhchhhhc---ccceeEEEecCcEEEecCccc-ccc-C
Confidence            9999999                         467999999999999876   445778889999999999876 333 8


Q ss_pred             hhhhcccC
Q psy8348         615 SKLKSTVQ  622 (622)
Q Consensus       615 ~~~~~~v~  622 (622)
                      +.|++||+
T Consensus       648 ~~~~~~v~  655 (668)
T KOG1137|consen  648 EGLKERVE  655 (668)
T ss_pred             ccHHHHHH
Confidence            89998874

>KOG1136\|consensus	Back alignment and domain information

>COG1782 Predicted metal-dependent RNase, consists of a metallo-beta-lactamase domain and an RNA-binding KH domain [General function prediction only]	Back alignment and domain information

>TIGR03675 arCOG00543 arCOG00543 universal archaeal KH-domain/beta-lactamase-domain protein	Back alignment and domain information

>COG1236 YSH1 Predicted exonuclease of the beta-lactamase fold involved in RNA processing [Translation, ribosomal structure and biogenesis]	Back alignment and domain information

>KOG1135\|consensus	Back alignment and domain information

>TIGR00649 MG423 conserved hypothetical protein	Back alignment and domain information

>KOG1138\|consensus	Back alignment and domain information

>PF11718 CPSF73-100_C: Pre-mRNA 3'-end-processing endonuclease polyadenylation factor C-term; InterPro: IPR021718 This is the C-terminal conserved region of the pre-mRNA 3'-end-processing of the polyadenylation factor CPSF-73/CPSF-100 proteins	Back alignment and domain information

>COG0595 mRNA degradation ribonucleases J1/J2 (metallo-beta-lactamase superfamily) [Translation, ribosomal structure and biogenesis; Replication, recombination and repair]	Back alignment and domain information

>PF10996 Beta-Casp: Beta-Casp domain; InterPro: IPR022712 The beta-CASP domain is found C-terminal to the beta-lactamase domain in pre-mRNA 3'-end-processing endonuclease	Back alignment and domain information

>KOG1361\|consensus	Back alignment and domain information

>PRK11244 phnP carbon-phosphorus lyase complex accessory protein; Provisional	Back alignment and domain information

>TIGR02651 RNase_Z ribonuclease Z	Back alignment and domain information

>TIGR02649 true_RNase_BN ribonuclease BN	Back alignment and domain information

>TIGR03307 PhnP phosphonate metabolism protein PhnP	Back alignment and domain information

>PRK00055 ribonuclease Z; Reviewed	Back alignment and domain information

>PRK02113 putative hydrolase; Provisional	Back alignment and domain information

>PRK05184 pyrroloquinoline quinone biosynthesis protein PqqB; Provisional	Back alignment and domain information

>TIGR02108 PQQ_syn_pqqB coenzyme PQQ biosynthesis protein B	Back alignment and domain information

>smart00849 Lactamase_B Metallo-beta-lactamase superfamily	Back alignment and domain information

>PRK02126 ribonuclease Z; Provisional	Back alignment and domain information

>PF12706 Lactamase_B_2: Beta-lactamase superfamily domain; PDB: 3BV6_F 1WW1_A 2E7Y_A 3RPC_D 3ZWF_A 3JXP_A 1XTO_A 2CBN_A 3G1P_B 3P2U_A	Back alignment and domain information

>COG1234 ElaC Metal-dependent hydrolases of the beta-lactamase superfamily III [General function prediction only]	Back alignment and domain information

>PRK00685 metal-dependent hydrolase; Provisional	Back alignment and domain information

>PRK11921 metallo-beta-lactamase/flavodoxin domain-containing protein; Provisional	Back alignment and domain information

>PF00753 Lactamase_B: Metallo-beta-lactamase superfamily; InterPro: IPR001279 Apart from the beta-lactamases and metallo-beta-lactamases, a number of other proteins contain this domain []	Back alignment and domain information

>TIGR02650 RNase_Z_T_toga ribonuclease Z, Thermotoga type	Back alignment and domain information

>PRK04286 hypothetical protein; Provisional	Back alignment and domain information

>PRK11709 putative L-ascorbate 6-phosphate lactonase; Provisional	Back alignment and domain information

>PRK05452 anaerobic nitric oxide reductase flavorubredoxin; Provisional	Back alignment and domain information

>COG2333 ComEC Predicted hydrolase (metallo-beta-lactamase superfamily) [General function prediction only]	Back alignment and domain information

>TIGR03413 GSH_gloB hydroxyacylglutathione hydrolase	Back alignment and domain information

>PF07521 RMMBL: RNA-metabolising metallo-beta-lactamase; InterPro: IPR011108 The metallo-beta-lactamase fold contains five sequence motifs	Back alignment and domain information

>COG0426 FpaA Uncharacterized flavoproteins [Energy production and conversion]	Back alignment and domain information

>PRK11539 ComEC family competence protein; Provisional	Back alignment and domain information

>TIGR00361 ComEC_Rec2 DNA internalization-related competence protein ComEC/Rec2	Back alignment and domain information

>KOG2121\|consensus	Back alignment and domain information

>PLN02469 hydroxyacylglutathione hydrolase	Back alignment and domain information

>PLN02398 hydroxyacylglutathione hydrolase	Back alignment and domain information

>COG0491 GloB Zn-dependent hydrolases, including glyoxylases [General function prediction only]	Back alignment and domain information

>PLN02962 hydroxyacylglutathione hydrolase	Back alignment and domain information

>PRK10241 hydroxyacylglutathione hydrolase; Provisional	Back alignment and domain information

>PF13483 Lactamase_B_3: Beta-lactamase superfamily domain; PDB: 1VJN_B 3KL7_A	Back alignment and domain information

>KOG0813\|consensus	Back alignment and domain information

>COG2220 Predicted Zn-dependent hydrolases of the beta-lactamase fold [General function prediction only]	Back alignment and domain information

>COG1237 Metal-dependent hydrolases of the beta-lactamase superfamily II [General function prediction only]	Back alignment and domain information

>COG2248 Predicted hydrolase (metallo-beta-lactamase superfamily) [General function prediction only]	Back alignment and domain information

>COG1235 PhnP Metal-dependent hydrolases of the beta-lactamase superfamily I [General function prediction only]	Back alignment and domain information

>PF02112 PDEase_II: cAMP phosphodiesterases class-II; InterPro: IPR000396 Cyclic-AMP phosphodiesterase (3	Back alignment and domain information

>KOG0814\|consensus	Back alignment and domain information

>PF07522 DRMBL: DNA repair metallo-beta-lactamase; InterPro: IPR011084 The metallo-beta-lactamase fold contains five sequence motifs	Back alignment and domain information

>COG5212 PDE1 Low-affinity cAMP phosphodiesterase [Signal transduction mechanisms]	Back alignment and domain information

>PF14597 Lactamase_B_5: Metallo-beta-lactamase superfamily; PDB: 2P97_B	Back alignment and domain information

>PF13691 Lactamase_B_4: tRNase Z endonuclease	Back alignment and domain information

>KOG3798\|consensus	Back alignment and domain information

>KOG4736\|consensus	Back alignment and domain information

>COG2015 Alkyl sulfatase and related hydrolases [Secondary metabolites biosynthesis, transport, and catabolism]	Back alignment and domain information

>KOG1137\|consensus	Back alignment and domain information

>KOG3592\|consensus	Back alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Alignment Graph	Length	Definition	E-value
Query		622
2i7t_A		459	Cleavage and polyadenylation specificity factor 73	0.0
3iek_A		431	Ribonuclease TTHA0252; metallo beta lactamase fold	0.0
3af5_A		651	Putative uncharacterized protein PH1404; archaeal	0.0
2ycb_A		636	Beta-CAsp RNAse, cleavage and polyadenylation spec	0.0
2xr1_A		640	Cleavage and polyadenylation specificity factor 1	0.0
2i7x_A		717	Protein CFT2; polyadenylation, metallo-B-lactamase	1e-135
2az4_A		429	Hypothetical protein EF2904; structural genomics,	3e-13
1zkp_A		268	Hypothetical protein BA1088; zinc binding protein,	8e-12
1vt4_I		1221	APAF-1 related killer DARK; drosophila apoptosome,	6e-10
1vt4_I		1221	APAF-1 related killer DARK; drosophila apoptosome,	4e-08
3bk2_A		562	RNAse J, metal dependent hydrolase; endoribonuclea	7e-08
3zq4_A		555	Ribonuclease J 1, RNAse J1; hydrolase, RNA maturat	5e-07
2p4z_A		284	Metal-dependent hydrolases of the beta-lactamase s	2e-06
3zwf_A		368	Zinc phosphodiesterase ELAC protein 1; beta-lactam	3e-06
3g1p_A		258	Protein PHNP; C-P lyase, phosphodiesterase, phosph	2e-05
2cbn_A		306	Ribonuclease Z; phosphodiesterase beta lactamase t	2e-05
1y44_A		320	Ribonuclease Z; zinc-dependent metal hydrolase, hy	5e-05
1qzv_F		154	Plant photosystem I: subunit PSAF; photosynthesis,	1e-04
3esh_A		280	Protein similar to metal-dependent hydrolase; stru	2e-04
1ztc_A		221	Hypothetical protein TM0894; structural genomics,	2e-04
1sml_A		269	Protein (penicillinase); metallo-beta-lactamase, a	5e-04
2e7y_A		280	TRNAse Z; tRNA maturation, metallo-beta-lactaMSe,	7e-04

>2i7t_A Cleavage and polyadenylation specificity factor 73 kDa subunit; metallo-B-lactamase, PRE-mRNA processing, artemis, V(D)J recombination; 2.10A {Homo sapiens} SCOP: d.157.1.10 PDB: 2i7v_A Length = 459	Back alignment and structure

 Score =  677 bits (1750), Expect = 0.0
 Identities = 361/442 (81%), Positives = 403/442 (91%)

Query: 6   GAGQEVGRSCIMLEFKNKSIMMDCGIHPGLSGMDALPFVDLVESDQIDLLLISHFHLDHC 65
           GAGQEVGRSCI+LEFK + IM+DCGIHPGL GMDALP++DL++  +IDLLLISHFHLDHC
Sbjct: 18  GAGQEVGRSCIILEFKGRKIMLDCGIHPGLEGMDALPYIDLIDPAEIDLLLISHFHLDHC 77

Query: 66  GALPWFLLKTGFKGRCFMTHATKAIYRWLLSDYIKVSNISTEQMLYTESDLEKSMDKIET 125
           GALPWFL KT FKGR FMTHATKAIYRWLLSDY+KVSNIS + MLYTE+DLE+SMDKIET
Sbjct: 78  GALPWFLQKTSFKGRTFMTHATKAIYRWLLSDYVKVSNISADDMLYTETDLEESMDKIET 137

Query: 126 INFHEEKDVNGIKFSAYNAGHVLGAAMFLIEIAGVKILYTGDFSRQEDRHLMAAEIPPVK 185
           INFHE K+V GIKF  Y+AGHVLGAAMF+IEIAGVK+LYTGDFSRQEDRHLMAAEIP +K
Sbjct: 138 INFHEVKEVAGIKFWCYHAGHVLGAAMFMIEIAGVKLLYTGDFSRQEDRHLMAAEIPNIK 197

Query: 186 PDILITESTYGTHVHEQREEREGRFTSLIHDIVNRGGRCLIPVFALGRAQELLLILDEYW 245
           PDILI ESTYGTH+HE+REERE RF + +HDIVNRGGR LIPVFALGRAQELLLILDEYW
Sbjct: 198 PDILIIESTYGTHIHEKREEREARFCNTVHDIVNRGGRGLIPVFALGRAQELLLILDEYW 257

Query: 246 SLHPELHDIPIYYASSLAKKCMSVYQTYINAMNDRIRRQISINNPFVFKHISNLKGIDHF 305
             HPELHDIPIYYASSLAKKCM+VYQTY+NAMND+IR+QI+INNPFVFKHISNLK +DHF
Sbjct: 258 QNHPELHDIPIYYASSLAKKCMAVYQTYVNAMNDKIRKQININNPFVFKHISNLKSMDHF 317

Query: 306 EDIGPCVVMASPGMMQSGLSRELFEMWCTDAKNGVIIAGYCVEGTLAKTILSEPEEVIGM 365
           +DIGP VVMASPGMMQSGLSRELFE WCTD +NGVIIAGYCVEGTLAK I+SEPEE+  M
Sbjct: 318 DDIGPSVVMASPGMMQSGLSRELFESWCTDKRNGVIIAGYCVEGTLAKHIMSEPEEITTM 377

Query: 366 SGQRLPLKMSVDYISFSAHTDYQQTSEFVRELRPAHVVLVHGEQNEMSRLKAALTREYED 425
           SGQ+LPLKMSVDYISFSAHTDYQQTSEF+R L+P HV+LVHGEQNEM+RLKAAL REYED
Sbjct: 378 SGQKLPLKMSVDYISFSAHTDYQQTSEFIRALKPPHVILVHGEQNEMARLKAALIREYED 437

Query: 426 DPNTSMELYNPRNTVSVDLYFK 447
           +    +E++NPRNT +V L F+
Sbjct: 438 NDEVHIEVHNPRNTEAVTLNFR 459

PyMOL of 2i7t

>3iek_A Ribonuclease TTHA0252; metallo beta lactamase fold, endonuclease, hydrolase, metal- nuclease, RNA-binding, rRNA processing; HET: FLC; 2.05A {Thermus thermophilus} PDB: 2dkf_A* 3iel_A* 3iem_A* 2zdf_A* 3idz_A* 2zdd_A* 3ie0_A* 2zde_A* 3ie1_A* 2zdw_A* 3a4y_A* 2yvd_A* 3ie2_A* Length = 431	Back alignment and structure

>3af5_A Putative uncharacterized protein PH1404; archaeal CPSF, beta-CAsp family, KH domain, ribonuclease, ME beta-lactamase superfamily, archaea; 2.60A {Pyrococcus horikoshii} PDB: 3af6_A* Length = 651	Back alignment and structure

>2ycb_A Beta-CAsp RNAse, cleavage and polyadenylation specificity factor; hydrolase, KH, metallo-beta-lactamase; 3.10A {Methanothermobacter thermautotrophicusorganism_taxid} Length = 636	Back alignment and structure

>2xr1_A Cleavage and polyadenylation specificity factor 1 subunit; hydrolase, metallo-beta-lactamase, beta-CAsp, RNA processing; 2.59A {Methanosarcina mazei} Length = 640	Back alignment and structure

>2i7x_A Protein CFT2; polyadenylation, metallo-B-lactamase, PRE-mRNA processing, artemis, V(D)J recombination, double-strand break repair; 2.50A {Saccharomyces cerevisiae} SCOP: d.157.1.10 Length = 717	Back alignment and structure

>2az4_A Hypothetical protein EF2904; structural genomics, PSI, protein STR initiative, midwest center for structural genomics, MCSG, U function; 2.00A {Enterococcus faecalis} SCOP: d.157.1.10 Length = 429	Back alignment and structure

>1zkp_A Hypothetical protein BA1088; zinc binding protein, structural genomics, PSI, protein STRU initiative; 1.50A {Bacillus anthracis str} SCOP: d.157.1.9 Length = 268	Back alignment and structure

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221	Back alignment and structure

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221	Back alignment and structure

>3bk2_A RNAse J, metal dependent hydrolase; endoribonuclease, exoribonuclease, metallo-beta-lactamase; HET: U5P; 2.10A {Thermus thermophilus} PDB: 3bk1_A* 3t3o_A* 3t3n_A* Length = 562	Back alignment and structure

>3zq4_A Ribonuclease J 1, RNAse J1; hydrolase, RNA maturation; 3.00A {Bacillus subtilis} Length = 555	Back alignment and structure

>2p4z_A Metal-dependent hydrolases of the beta-lactamase superfamily II; metal-dependent hydrolases of the beta-lactamase superfamily hydrolase; 2.10A {Thermoanaerobacter tengcongensis} Length = 284	Back alignment and structure

>3zwf_A Zinc phosphodiesterase ELAC protein 1; beta-lactamase, hydrolase, metal-binding, tRNA processing, zinc-binding, catabolism; 1.70A {Homo sapiens} Length = 368	Back alignment and structure

>3g1p_A Protein PHNP; C-P lyase, phosphodiesterase, phosphonate utilization, alkylphosphonate uptake; 1.40A {Escherichia coli} PDB: 3p2u_A Length = 258	Back alignment and structure

>2cbn_A Ribonuclease Z; phosphodiesterase beta lactamase tRNAse Z, hydrolase, metal- binding, endonuclease, tRNA processing, zinc; 2.9A {Escherichia coli} SCOP: d.157.1.7 Length = 306	Back alignment and structure

>1y44_A Ribonuclease Z; zinc-dependent metal hydrolase, hydrolase; HET: MES; 2.10A {Bacillus subtilis} SCOP: d.157.1.7 PDB: 2fk6_A* Length = 320	Back alignment and structure

>1qzv_F Plant photosystem I: subunit PSAF; photosynthesis,plant photosynthetic reaction center, peripheral antenna; HET: CL1 PQN; 4.44A {Pisum sativum} SCOP: i.5.1.1 Length = 154	Back alignment and structure

>3esh_A Protein similar to metal-dependent hydrolase; structural genomics, PSI-2, protein structure initiative; 2.50A {Staphylococcus aureus subsp} Length = 280	Back alignment and structure

>1ztc_A Hypothetical protein TM0894; structural genomics, joint center for structural genomics, J protein structure initiative, PSI, hydrolase; HET: MSE; 2.10A {Thermotoga maritima} SCOP: d.157.1.11 Length = 221	Back alignment and structure

>1sml_A Protein (penicillinase); metallo-beta-lactamase, antibiotic resistance, binuclear zinc, hydrolase; 1.70A {Stenotrophomonas maltophilia} SCOP: d.157.1.1 PDB: 2aio_A* 2fm6_A 2fu6_A 2fu7_A* 2fu8_A* 2fu9_A* 2gfj_A* 2gfk_A* 2h6a_A 2hb9_A* 2qdt_A* 2qjs_A 2qin_A Length = 269	Back alignment and structure

>2e7y_A TRNAse Z; tRNA maturation, metallo-beta-lactaMSe, structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.97A {Thermotoga maritima} SCOP: d.157.1.7 PDB: 1ww1_A Length = 280	Back alignment and structure

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Alignment Graph	Length	Definition	Probability
Query		622
2i7t_A		459	Cleavage and polyadenylation specificity factor 73	100.0
3iek_A		431	Ribonuclease TTHA0252; metallo beta lactamase fold	100.0
2xr1_A		640	Cleavage and polyadenylation specificity factor 1	100.0
3af5_A		651	Putative uncharacterized protein PH1404; archaeal	100.0
2ycb_A		636	Beta-CAsp RNAse, cleavage and polyadenylation spec	100.0
2i7x_A		717	Protein CFT2; polyadenylation, metallo-B-lactamase	100.0
3zq4_A		555	Ribonuclease J 1, RNAse J1; hydrolase, RNA maturat	100.0
3bk2_A		562	RNAse J, metal dependent hydrolase; endoribonuclea	100.0
2az4_A		429	Hypothetical protein EF2904; structural genomics,	100.0
3zdk_A		336	5' exonuclease apollo; hydrolase; HET: TLA; 2.16A	100.0
4b87_A		367	DNA cross-LINK repair 1A protein; dclre1A, DCLRE,	100.0
1zkp_A		268	Hypothetical protein BA1088; zinc binding protein,	99.82
2cbn_A		306	Ribonuclease Z; phosphodiesterase beta lactamase t	99.82
1y44_A		320	Ribonuclease Z; zinc-dependent metal hydrolase, hy	99.82
3g1p_A		258	Protein PHNP; C-P lyase, phosphodiesterase, phosph	99.79
3zwf_A		368	Zinc phosphodiesterase ELAC protein 1; beta-lactam	99.75
3md7_A		293	Beta-lactamase-like; ssgcid, hydrolase, structural	99.71
2e7y_A		280	TRNAse Z; tRNA maturation, metallo-beta-lactaMSe,	99.71
3kl7_A		235	Putative metal-dependent hydrolase; structural gen	99.64
3jxp_A		321	Coenzyme PQQ synthesis protein B; alpha-beta prote	99.63
3m8t_A		294	'BLR6230 protein; subclass B3 beta-lactamase, zinc	99.59
2r2d_A		276	AGR_PTI_140P, Zn-dependent hydrolases; lactonase,	99.59
3esh_A		280	Protein similar to metal-dependent hydrolase; stru	99.57
1k07_A		263	FEZ-1 beta-lactamase; monomer with alpha-beta/BETA	99.56
3rpc_A		264	Possible metal-dependent hydrolase; structural gen	99.54
3adr_A		261	Putative uncharacterized protein ST1585; quorum se	99.53
3dha_A		254	N-acyl homoserine lactone hydrolase; zinc bimetall	99.53
2wyl_A		360	L-ascorbate-6-phosphate lactonase ULAG; hydrolase;	99.52
3l6n_A		219	Metallo-beta-lactamase; zinc, hydolase, antibiotic	99.52
2xf4_A		210	Hydroxyacylglutathione hydrolase; HET: PG4; 2.30A	99.5
3bv6_A		379	Metal-dependent hydrolase; metallo protein, beta-l	99.5
4dik_A		410	Flavoprotein; TM0755, electron transport, DI-iron	99.49
1ztc_A		221	Hypothetical protein TM0894; structural genomics,	99.48
4ax1_B		303	Metallo-beta-lactamase AIM-1; hydrolase, antibioti	99.46
1m2x_A		223	Class B carbapenemase BLAB-1; alpha-beta/BETA-alph	99.45
1sml_A		269	Protein (penicillinase); metallo-beta-lactamase, a	99.45
4hl2_A		243	Beta-lactamase NDM-1; structural genomics, PSI-bio	99.44
2bib_A		547	CBPE, teichoic acid phosphorylcholine esterase/ ch	99.43
2zwr_A		207	Metallo-beta-lactamase superfamily protein; hydrol	99.43
1p9e_A		331	Methyl parathion hydrolase; Zn containing; 2.40A {	99.42
1e5d_A		402	Rubredoxin\:oxygen oxidoreductase; oxygenreductase	99.42
3iog_A		227	Beta-lactamase; hydrolase, antibiotic resistance,	99.42
1mqo_A		227	Beta-lactamase II; alpha-beta/BETA-alpha fold, hyd	99.42
2zo4_A		317	Metallo-beta-lactamase family protein; hydrolase;	99.42
1a7t_A		232	Metallo-beta-lactamase; hydrolase (beta-lactamase)	99.42
3aj3_A		274	MLR6805 protein, 4-pyridoxolactonase; Zn-protein,	99.41
3q6v_A		233	Beta-lactamase; metalloenzyme, alpha-beta, hydrola	99.41
4efz_A		298	Metallo-beta-lactamase family protein; structural	99.41
2fhx_A		246	SPM-1; metallo-beta-lactamase, dinuclear zinc, ant	99.4
1vjn_A		220	Zn-dependent hydrolase of metallo-beta-lactamase s	99.39
4ad9_A		289	Lactb2, beta-lactamase-like protein 2; hydrolase,	99.38
2qed_A		258	Hydroxyacylglutathione hydrolase; metallo-B- super	99.37
2p18_A		311	Glyoxalase II; metalloprotein, beta sandwich, alph	99.37
2ohh_A		404	Type A flavoprotein FPRA; beta-lactamase like doma	99.37
3hnn_A		262	Putative diflavin flavoprotein A 5; PSI-2, protein	99.36
2vw8_A		303	PA1000, PQSE; quinolone signal response protein, s	99.36
1qh5_A		260	Glyoxalase II, protein (hydroxyacylglutathione hyd	99.33
3tp9_A		474	Beta-lactamase and rhodanese domain protein; struc	99.32
1xm8_A		254	Glyoxalase II; structural genomics, protein struct	99.32
1ycg_A		398	Nitric oxide reductase; DIIRON site, oxidoreductas	99.32
1jjt_A		228	IMP-1 metallo beta-lactamase; metallo-beta-lactama	99.32
2y8b_A		265	Metallo-B-lactamase; hydrolase, cephalosporins, an	99.3
2gcu_A		245	Putative hydroxyacylglutathione hydrolase 3; ethyl	99.3
2q9u_A		414	A-type flavoprotein; flavodoxin like, beta lactama	99.22
4eyb_A		270	Beta-lactamase NDM-1; metallo beta lactamase, anti	99.22
3r2u_A		466	Metallo-beta-lactamase family protein; structural	99.19
2p97_A		201	Hypothetical protein; putative metal-dependent hyd	99.14
2cfu_A		658	SDSA1; SDS-hydrolase, lactamase, hydrolase; HET: 1	99.0
2yhe_A		668	SEC-alkyl sulfatase; hydrolase, inversion, metallo	98.38
2p4z_A		284	Metal-dependent hydrolases of the beta-lactamase s	98.51
3h3e_A		267	Uncharacterized protein TM1679; structural genomic	97.84
3rpc_A		264	Possible metal-dependent hydrolase; structural gen	82.1

>2i7t_A Cleavage and polyadenylation specificity factor 73 kDa subunit; metallo-B-lactamase, PRE-mRNA processing, artemis, V(D)J recombination; 2.10A {Homo sapiens} SCOP: d.157.1.10 PDB: 2i7v_A	Back alignment and structure

Probab=100.00  E-value=2.2e-79  Score=674.77  Aligned_cols=446  Identities=81%  Similarity=1.311  Sum_probs=367.1

Q ss_pred             cEecCCCCCCCCcEEEEEECCeEEEEeCCCCCCCCCCCCCCCCCCCCCCCccEEEcCCCchhhhcchHHHHHhcCCCCeE
Q psy8348           2 KTLKGAGQEVGRSCIMLEFKNKSIMMDCGIHPGLSGMDALPFVDLVESDQIDLLLISHFHLDHCGALPWFLLKTGFKGRC   81 (622)
Q Consensus         2 v~~LG~g~evG~sc~lI~~~~~~ILiD~G~~~~~~~~~~lp~~~~~~~~~Id~IlITH~H~DHiggLp~l~~~~~~~~~I   81 (622)
                      |++||+++++|+||++|+.++.+||||||..++..+...+|++..+++.+||+|||||+|.||+||+|++..+.+++++|
T Consensus        14 i~~LG~~~~vg~s~~li~~~~~~iLID~G~~~~~~~~~~~~~l~~~~~~~Id~VllTH~H~DH~ggl~~l~~~~~~~~~i   93 (459)
T 2i7t_A           14 IRPLGAGQEVGRSCIILEFKGRKIMLDCGIHPGLEGMDALPYIDLIDPAEIDLLLISHFHLDHCGALPWFLQKTSFKGRT   93 (459)
T ss_dssp             EEEEESSSSSSSCEEEEEETTEEEEECCCCCTTSCGGGGSCCGGGSCGGGCCEEECCCSSHHHHTTHHHHHHHSSCCSEE
T ss_pred             EEEEecCCCCCCCEEEEEECCeEEEEeCCCCcCcccccccCcccccCcccCcEEEECCCChhhhhhhHHHHHhcCCCCCE
Confidence            78999999999999999999999999999876654445566666678889999999999999999999998888889999


Q ss_pred             EechhhHHHHHHHHHhHHhhhcccccccCCCHHHHHHhhcccEEecCCCeEEeCCEEEEEEeCCCCCCcEEEEEEECCEE
Q psy8348          82 FMTHATKAIYRWLLSDYIKVSNISTEQMLYTESDLEKSMDKIETINFHEEKDVNGIKFSAYNAGHVLGAAMFLIEIAGVK  161 (622)
Q Consensus        82 y~t~~t~~i~~~~l~d~~~~~~~~~~~~ly~~~di~~~~~~i~~i~~~~~~~i~gi~v~~~~aGH~~Gs~~~~I~~~~~~  161 (622)
                      |++++|.++++.++.++.++........+|+..++.....++..+++++.++++|++++++++||++|+++|.++.++.+
T Consensus        94 y~t~~t~~l~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~v~~~~~GH~~Gs~~~~i~~~~~~  173 (459)
T 2i7t_A           94 FMTHATKAIYRWLLSDYVKVSNISADDMLYTETDLEESMDKIETINFHEVKEVAGIKFWCYHAGHVLGAAMFMIEIAGVK  173 (459)
T ss_dssp             EEEHHHHHHHHHHHHHHCC---------CCCHHHHHHHGGGEEEECTTCCEEETTEEEEEEECCSSTTCEEEEEEETTEE
T ss_pred             EechHHHHHHHHHHHHHHHHhcccccccccCHHHHHHHHhccEEeCCCCEEEECCEEEEEEeCCCccCcEEEEEEECCcE
Confidence            99999999999888887766555455677888888887788999999999999999999999999999999999999999


Q ss_pred             EEEEcCCCCCccccccccCCCCCCCcEEEEcccCCCCCCchhhhHHHHHHHHHHHHHHcCCeEEEeecccchHHHHHHHH
Q psy8348         162 ILYTGDFSRQEDRHLMAAEIPPVKPDILITESTYGTHVHEQREEREGRFTSLIHDIVNRGGRCLIPVFALGRAQELLLIL  241 (622)
Q Consensus       162 IlytGD~~~~~~~~l~~a~~~~~~~DvLI~EsTyg~~~~~~~~~~~~~~~~~i~~~l~~gg~vliP~falGR~qEll~iL  241 (622)
                      ++||||+...++.++..+.++..++|+||+||||+.+.|+++.+++++|.+.+++++++||+|+||+|++||+|||+.+|
T Consensus       174 il~sGD~~~~~~~~~~~~~~~~~~~D~Li~Esty~~~~~~~~~~~~~~l~~~i~~~~~~~g~vlip~fa~gr~qell~~l  253 (459)
T 2i7t_A          174 LLYTGDFSRQEDRHLMAAEIPNIKPDILIIESTYGTHIHEKREEREARFCNTVHDIVNRGGRGLIPVFALGRAQELLLIL  253 (459)
T ss_dssp             EEECCSCCCC-----CCCCCCSSCCSEEEEECTTTTCCCCCHHHHHHHHHHHHHHHHHTTCEEEEECCSSSSHHHHHHHH
T ss_pred             EEEeCCCCCCCCcccCCCCcCCCCCeEEEECCCCCCCCCCChHHHHHHHHHHHHHHHHCCCEEEEEecchhHHHHHHHHH
Confidence            99999999988777665556667899999999999999999889999999999999999999999999999999999999


Q ss_pred             HHHHHhCCCCCCccEEEECchHHHHHHHHHHhHHhhhHHHHHHHhcCCCcccccccccccccccccCCCeEEEecCCCCC
Q psy8348         242 DEYWSLHPELHDIPIYYASSLAKKCMSVYQTYINAMNDRIRRQISINNPFVFKHISNLKGIDHFEDIGPCVVMASPGMMQ  321 (622)
Q Consensus       242 ~~~~~~~~~l~~ipI~~~s~~a~~~~~~y~~~~~~~~~~i~~~~~~~npf~f~~i~~l~~~~~~~~~~p~Vvias~gml~  321 (622)
                      +++|++++.++++|||++|++|.+++++|++|.+||++.+++.+...|||.|+++..+++.+.+...+||||+|+||||+
T Consensus       254 ~~~~~~~~~~~~~pi~~~s~~a~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~viia~~gm~~  333 (459)
T 2i7t_A          254 DEYWQNHPELHDIPIYYASSLAKKCMAVYQTYVNAMNDKIRKQININNPFVFKHISNLKSMDHFDDIGPSVVMASPGMMQ  333 (459)
T ss_dssp             HHHHHHCGGGTTSCEEEC---------------------------------CCSEEECCCTTSSCCCSSEEEEESCTTCS
T ss_pred             HHHHHhcCCCCCccEEEECHHHHHHHHHHHHHHHHHhHHHHHHhcccCCcCCCcceeeCCHHHhcCCCCeEEEEcCcccC
Confidence            99999887778899999999999999999999999999998887778999999988776655555679999999999999


Q ss_pred             cchHHHHHHHHcCCCCCeEEEeccCCCCCcccccccCCceeeeccCeEeeceeeEEEEecccCCCHHHHHHHHHHhCCCe
Q psy8348         322 SGLSRELFEMWCTDAKNGVIIAGYCVEGTLAKTILSEPEEVIGMSGQRLPLKMSVDYISFSAHTDYQQTSEFVRELRPAH  401 (622)
Q Consensus       322 ~G~s~~~l~~~~~d~~n~vil~gy~~~gt~~~~l~~~~~~~~~~~g~~i~~~~~v~~i~fS~Had~~el~~~i~~l~P~~  401 (622)
                      +|+++++|++|++|++|+|+|+||+++||+|++++++++.+..+.|+.++++|+|+.++||+|||+.||.+||+.++|++
T Consensus       334 ~g~~~~~l~~~~~~~~~~ii~~gy~~~gt~g~~l~~~~~~~~~~~g~~~~~~~~v~~~~~S~Had~~~l~~~i~~~~p~~  413 (459)
T 2i7t_A          334 SGLSRELFESWCTDKRNGVIIAGYCVEGTLAKHIMSEPEEITTMSGQKLPLKMSVDYISFSAHTDYQQTSEFIRALKPPH  413 (459)
T ss_dssp             SHHHHHHHHHHTTCTTCEEEECSCCCTTSHHHHHTTCCSEEECTTSCEEECCSEEEECCCSCCCCHHHHHHHHHHHCCSE
T ss_pred             CCHHHHHHHHHcCCCCCeEEEEecCCCCChHHHHhhCCceeeeeCCcEEEEEEEEEEeeecccCCHHHHHHHHHhcCCCe
Confidence            99999999999999999999999999999999999999887778899999999999999999999999999999999999


Q ss_pred             EEEEcCChHHHHHHHHHHHHhhcCCCCCceEEeeCCCCcEEEEeec
Q psy8348         402 VVLVHGEQNEMSRLKAALTREYEDDPNTSMELYNPRNTVSVDLYFK  447 (622)
Q Consensus       402 VilvHGe~~~~~~l~~~l~~~~~~~~~~~~~v~~p~ng~~v~l~~~  447 (622)
                      |++||||+..+.+|++.|.++|+.+++.+.++++|+|||+++|.|+
T Consensus       414 v~~vHGe~~~~~~~~~~l~~~~~~~~~~~~~~~~p~~~~~~~~~~~  459 (459)
T 2i7t_A          414 VILVHGEQNEMARLKAALIREYEDNDEVHIEVHNPRNTEAVTLNFR  459 (459)
T ss_dssp             EEEESSCHHHHHHHHHHHHHHHSSCTTCCCEEECCCTTCCEEEEEC
T ss_pred             EEEeCCCHHHHHHHHHHHHHHhccccccCceEEeCCCCCEEEEEeC
Confidence            9999999999999999999999866544578999999999999985

PyMOL of 2i7t

>3iek_A Ribonuclease TTHA0252; metallo beta lactamase fold, endonuclease, hydrolase, metal- nuclease, RNA-binding, rRNA processing; HET: FLC; 2.05A {Thermus thermophilus} SCOP: d.157.1.10 PDB: 2dkf_A* 3iel_A* 3iem_A* 2zdf_A* 3idz_A* 2zdd_A* 3ie0_A* 2zde_A* 3ie1_A* 2zdw_A* 3a4y_A* 2yvd_A* 3ie2_A*	Back alignment and structure

>2xr1_A Cleavage and polyadenylation specificity factor 1 subunit; hydrolase, metallo-beta-lactamase, beta-CAsp, RNA processing; 2.59A {Methanosarcina mazei}	Back alignment and structure

>3af5_A Putative uncharacterized protein PH1404; archaeal CPSF, beta-CAsp family, KH domain, ribonuclease, ME beta-lactamase superfamily, archaea; 2.60A {Pyrococcus horikoshii} PDB: 3af6_A*	Back alignment and structure

>2ycb_A Beta-CAsp RNAse, cleavage and polyadenylation specificity factor; hydrolase, KH, metallo-beta-lactamase; 3.10A {Methanothermobacter thermautotrophicusorganism_taxid}	Back alignment and structure

>2i7x_A Protein CFT2; polyadenylation, metallo-B-lactamase, PRE-mRNA processing, artemis, V(D)J recombination, double-strand break repair; 2.50A {Saccharomyces cerevisiae} SCOP: d.157.1.10	Back alignment and structure

>3zq4_A Ribonuclease J 1, RNAse J1; hydrolase, RNA maturation; 3.00A {Bacillus subtilis}	Back alignment and structure

>3bk2_A RNAse J, metal dependent hydrolase; endoribonuclease, exoribonuclease, metallo-beta-lactamase; HET: U5P; 2.10A {Thermus thermophilus} PDB: 3bk1_A* 3t3o_A* 3t3n_A*	Back alignment and structure

>2az4_A Hypothetical protein EF2904; structural genomics, PSI, protein STR initiative, midwest center for structural genomics, MCSG, U function; 2.00A {Enterococcus faecalis} SCOP: d.157.1.10	Back alignment and structure

>3zdk_A 5' exonuclease apollo; hydrolase; HET: TLA; 2.16A {Homo sapiens}	Back alignment and structure

>4b87_A DNA cross-LINK repair 1A protein; dclre1A, DCLRE, interstrand crosslink repair, hydrolase, NIT mustard, cancer, chemotherapy, PSO2 homolog,; HET: DNA; 2.16A {Homo sapiens}	Back alignment and structure

>1zkp_A Hypothetical protein BA1088; zinc binding protein, structural genomics, PSI, protein STRU initiative; 1.50A {Bacillus anthracis str} SCOP: d.157.1.9	Back alignment and structure

>2cbn_A Ribonuclease Z; phosphodiesterase beta lactamase tRNAse Z, hydrolase, metal- binding, endonuclease, tRNA processing, zinc; 2.9A {Escherichia coli} SCOP: d.157.1.7	Back alignment and structure

>1y44_A Ribonuclease Z; zinc-dependent metal hydrolase, hydrolase; HET: MES; 2.10A {Bacillus subtilis} SCOP: d.157.1.7 PDB: 2fk6_A*	Back alignment and structure

>3g1p_A Protein PHNP; C-P lyase, phosphodiesterase, phosphonate utilization, alkylphosphonate uptake; 1.40A {Escherichia coli} PDB: 3p2u_A	Back alignment and structure

>3zwf_A Zinc phosphodiesterase ELAC protein 1; beta-lactamase, hydrolase, metal-binding, tRNA processing, zinc-binding, catabolism; 1.70A {Homo sapiens}	Back alignment and structure

>3md7_A Beta-lactamase-like; ssgcid, hydrolase, structural genomics, structural genomics center for infectious disease; HET: 5GP TLA; 1.27A {Brucella melitensis biovar abortus} PDB: 3qh8_A* 3py6_A* 3py5_A*	Back alignment and structure

>2e7y_A TRNAse Z; tRNA maturation, metallo-beta-lactaMSe, structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.97A {Thermotoga maritima} SCOP: d.157.1.7 PDB: 1ww1_A	Back alignment and structure

>3kl7_A Putative metal-dependent hydrolase; structural genomics, JOI for structural genomics, JCSG; 2.30A {Parabacteroides distasonis atcc 8503}	Back alignment and structure

>3jxp_A Coenzyme PQQ synthesis protein B; alpha-beta protein, PQQ biosynthesis, transport, biosyntheti; 2.20A {Pseudomonas putida} SCOP: d.157.1.6 PDB: 1xto_A	Back alignment and structure

>3m8t_A 'BLR6230 protein; subclass B3 beta-lactamase, zinc enzyme, sulfonamide complex hydrolase-hydrolase inhibitor complex; HET: 4NZ; 1.33A {Bradyrhizobium japonicum} PDB: 3lvz_A* 2gmn_A	Back alignment and structure

>2r2d_A AGR_PTI_140P, Zn-dependent hydrolases; lactonase, N-acyl hompserine lactone, DI-nuclear zinc center quenching, AIIB, phosphate; HET: PO4; 1.75A {Agrobacterium tumefaciens}	Back alignment and structure

>3esh_A Protein similar to metal-dependent hydrolase; structural genomics, PSI-2, protein structure initiative; 2.50A {Staphylococcus aureus subsp}	Back alignment and structure

>1k07_A FEZ-1 beta-lactamase; monomer with alpha-beta/BETA-alpha fold. two monomers PER AS UNIT., hydrolase; HET: GOL; 1.65A {Fluoribacter gormanii} SCOP: d.157.1.1 PDB: 1jt1_A* 1l9y_A	Back alignment and structure

>3rpc_A Possible metal-dependent hydrolase; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics; 1.49A {Veillonella parvula}	Back alignment and structure

>3adr_A Putative uncharacterized protein ST1585; quorum sensing, quinolone signal, metallo-beta-lactamase FOL conserved hypothetical protein; HET: EPE; 1.80A {Sulfolobus tokodaii}	Back alignment and structure

>3dha_A N-acyl homoserine lactone hydrolase; zinc bimetallohydrolase, quorum quenching; HET: C6L GOL; 0.95A {Bacillus thuringiensis serovar kurstakorganism_taxid} PDB: 3dhb_A* 3dhc_A* 2a7m_A* 2br6_A 2btn_A	Back alignment and structure

>2wyl_A L-ascorbate-6-phosphate lactonase ULAG; hydrolase; 2.59A {Escherichia coli} PDB: 2wym_A*	Back alignment and structure

>3l6n_A Metallo-beta-lactamase; zinc, hydolase, antibiotics resistance, hydrolase; 1.65A {Chryseobacterium indologenes} SCOP: d.157.1.0	Back alignment and structure

>2xf4_A Hydroxyacylglutathione hydrolase; HET: PG4; 2.30A {Salmonella enterica}	Back alignment and structure

>3bv6_A Metal-dependent hydrolase; metallo protein, beta-lactamase like fold, MCSG, structural PSI-2, protein structure initiative; 1.80A {Vibrio cholerae o1 biovar eltor}	Back alignment and structure

>4dik_A Flavoprotein; TM0755, electron transport, DI-iron protein; 1.75A {Thermotoga maritima} PDB: 4dil_A 1vme_A*	Back alignment and structure

>1ztc_A Hypothetical protein TM0894; structural genomics, joint center for structural genomics, J protein structure initiative, PSI, hydrolase; HET: MSE; 2.10A {Thermotoga maritima} SCOP: d.157.1.11	Back alignment and structure

>4ax1_B Metallo-beta-lactamase AIM-1; hydrolase, antibiotic resistance, acquired B3, drug binding; 1.40A {Pseudomonas aeruginosa} PDB: 4awy_B 4awz_A 4ax0_B	Back alignment and structure

>1m2x_A Class B carbapenemase BLAB-1; alpha-beta/BETA-alpha fold., hydrolase; HET: MCO; 1.50A {Elizabethkingia meningoseptica} SCOP: d.157.1.1	Back alignment and structure

>1sml_A Protein (penicillinase); metallo-beta-lactamase, antibiotic resistance, binuclear zinc, hydrolase; 1.70A {Stenotrophomonas maltophilia} SCOP: d.157.1.1 PDB: 2aio_A* 2fm6_A 2fu6_A 2fu7_A* 2fu8_A* 2fu9_A* 2gfj_A* 2gfk_A* 2h6a_A 2hb9_A* 2qdt_A* 2qjs_A 2qin_A	Back alignment and structure

>4hl2_A Beta-lactamase NDM-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: ZZ7; 1.05A {Klebsiella pneumoniae} PDB: 4hl1_A* 4h0d_A* 4gyu_A* 4gyq_A 3q6x_A* 3spu_A 3rkj_A 3sfp_A* 3rkk_A* 3sbl_A* 3srx_A 3zr9_A 3s0z_A 3pg4_A	Back alignment and structure

>2bib_A CBPE, teichoic acid phosphorylcholine esterase/ choline protein; choline-binding protein, PCE, phosphorylcholine estera hydrolase; HET: PC BTB; 1.92A {Streptococcus pneumoniae} SCOP: b.109.1.1 d.157.1.8 PDB: 1wra_A*	Back alignment and structure

>2zwr_A Metallo-beta-lactamase superfamily protein; hydrolase; 2.20A {Thermus thermophilus} PDB: 2zzi_A	Back alignment and structure

>1p9e_A Methyl parathion hydrolase; Zn containing; 2.40A {Pseudomonas SP} SCOP: d.157.1.5	Back alignment and structure

>1e5d_A Rubredoxin\:oxygen oxidoreductase; oxygenreductase, DIIRON-centre, flavoproteins, lactamase-fold; HET: FMN; 2.5A {Desulfovibrio gigas} SCOP: c.23.5.1 d.157.1.3	Back alignment and structure

>3iog_A Beta-lactamase; hydrolase, antibiotic resistance, metal-binding; HET: SDF; 1.41A {Aeromonas hydrophila} SCOP: d.157.1.1 PDB: 1x8i_A 3fai_A* 3iof_A* 1x8h_A 2qds_A* 2gkl_A* 1x8g_A* 3f9o_A 3t9m_A 3sw3_A	Back alignment and structure

>1mqo_A Beta-lactamase II; alpha-beta/BETA-alpha fold, hydrolase; HET: CIT; 1.35A {Bacillus cereus} SCOP: d.157.1.1 PDB: 1bc2_A 1bvt_A* 3i0v_A 3i11_A 3i13_A 3i14_A 3i15_A 2uyx_A 2bc2_A 3bc2_A 2bfl_A 2bfk_A 2bfz_B 2bg2_A 2bg7_A 2bg8_A 1dxk_A 3kns_A 3knr_A 2bfz_A ...	Back alignment and structure

>2zo4_A Metallo-beta-lactamase family protein; hydrolase; 2.10A {Thermus thermophilus}	Back alignment and structure

>1a7t_A Metallo-beta-lactamase; hydrolase (beta-lactamase), zinc; HET: MES; 1.85A {Bacteroides fragilis} SCOP: d.157.1.1 PDB: 1a8t_A* 2bmi_A 1kr3_A 1znb_A 2znb_A 3znb_A 4znb_A 1hlk_A*	Back alignment and structure

>3aj3_A MLR6805 protein, 4-pyridoxolactonase; Zn-protein, metallo-beta-lactamase, hydrolase; 1.58A {Mesorhizobium loti} PDB: 3aj0_A	Back alignment and structure

>3q6v_A Beta-lactamase; metalloenzyme, alpha-beta, hydrolase; 1.37A {Serratia fonticola} PDB: 3sd9_A	Back alignment and structure

>4efz_A Metallo-beta-lactamase family protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.60A {Burkholderia pseudomallei}	Back alignment and structure

>2fhx_A SPM-1; metallo-beta-lactamase, dinuclear zinc, antibiotic resistanc hydrolase, metal binding protein; 1.90A {Pseudomonas aeruginosa}	Back alignment and structure

>1vjn_A Zn-dependent hydrolase of metallo-beta-lactamase superfamily TM0207; metallo-hydrolase/oxidoreductase fold, structural genomics; 2.00A {Thermotoga maritima} SCOP: d.157.1.4	Back alignment and structure

>4ad9_A Lactb2, beta-lactamase-like protein 2; hydrolase, metallo-beta lactamase, mitochondria; 2.60A {Homo sapiens}	Back alignment and structure

>2qed_A Hydroxyacylglutathione hydrolase; metallo-B- superfamily, salmonella typhimurium LT2; 1.45A {Salmonella typhimurium} SCOP: d.157.1.2	Back alignment and structure

>2p18_A Glyoxalase II; metalloprotein, beta sandwich, alpha-helical domain, hydrola; HET: SPD; 1.80A {Leishmania infantum} PDB: 2p1e_A*	Back alignment and structure

>2ohh_A Type A flavoprotein FPRA; beta-lactamase like domain, flavodoxine like domain, oxidore; HET: FMN; 1.70A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 2ohi_A* 2ohj_A*	Back alignment and structure

>2vw8_A PA1000, PQSE; quinolone signal response protein, signaling protein, SSPF; 1.45A {Pseudomonas aeruginosa PAO1} PDB: 2q0j_A 2q0i_A 3dh8_A*	Back alignment and structure

>1qh5_A Glyoxalase II, protein (hydroxyacylglutathione hydrolase); metallo-hydrolase; HET: GSH GBP; 1.45A {Homo sapiens} SCOP: d.157.1.2 PDB: 1qh3_A*	Back alignment and structure

>3tp9_A Beta-lactamase and rhodanese domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.70A {Alicyclobacillus acidocaldarius subsp}	Back alignment and structure

>1xm8_A Glyoxalase II; structural genomics, protein structure initiative, CESG, AT2G31350, metallo-hydrolase, zinc/iron binuclear center; 1.74A {Arabidopsis thaliana} SCOP: d.157.1.2 PDB: 2q42_A	Back alignment and structure

>1ycg_A Nitric oxide reductase; DIIRON site, oxidoreductase; HET: FMN; 2.80A {Moorella thermoacetica} SCOP: c.23.5.1 d.157.1.3 PDB: 1ycf_A* 1ych_A*	Back alignment and structure

>1jjt_A IMP-1 metallo beta-lactamase; metallo-beta-lactamase inhibitor, succinic acid inhibitor, I metallo-beta-lactamase, hydrolase; HET: BDS; 1.80A {Pseudomonas aeruginosa} SCOP: d.157.1.1 PDB: 1dd6_A* 1vgn_A* 2doo_A* 1wup_A 1wuo_A 1jje_A* 1ddk_A	Back alignment and structure

>2y8b_A Metallo-B-lactamase; hydrolase, cephalosporins, antibiotic recognition; 1.70A {Pseudomonas aeruginosa} PDB: 2y8a_A 2y87_A 2yz3_A* 2whg_A* 2wrs_A* 1ko3_A 1ko2_A	Back alignment and structure

>2gcu_A Putative hydroxyacylglutathione hydrolase 3; ethylmalonic encephalopathy, ETHE1, structural genomics, protein structure initiative; 1.48A {Arabidopsis thaliana}	Back alignment and structure

>2q9u_A A-type flavoprotein; flavodoxin like, beta lactamase like, oxidoreductase; HET: FMN; 1.90A {Giardia intestinalis}	Back alignment and structure

>4eyb_A Beta-lactamase NDM-1; metallo beta lactamase, antibiotic, hydrolase-antibiotic COM; HET: 0WO; 1.16A {Klebsiella pneumoniae} PDB: 4ey2_A* 4eyf_A* 4exy_A 4exs_B 4eyl_A* 3spu_A 3q6x_A* 3rkj_A 3sfp_A* 3rkk_A* 3sbl_A* 3srx_A 3zr9_A 3s0z_A 3pg4_A	Back alignment and structure

>3r2u_A Metallo-beta-lactamase family protein; structural genomics, for structural genomics of infectious diseases, csgid, HYDR; 2.10A {Staphylococcus aureus}	Back alignment and structure

>2p97_A Hypothetical protein; putative metal-dependent hydrolase, structural genomics, JOI for structural genomics, JCSG; HET: MSE; 1.65A {Anabaena variabilis atcc 29413} SCOP: d.157.1.12	Back alignment and structure

>2cfu_A SDSA1; SDS-hydrolase, lactamase, hydrolase; HET: 1DB; 1.9A {Pseudomonas aeruginosa} SCOP: d.106.1.3 d.157.1.13 PDB: 2cfz_A* 2cg2_A 2cg3_A*	Back alignment and structure

>2yhe_A SEC-alkyl sulfatase; hydrolase, inversion, metallo-beta-lactamase fold; 2.70A {Pseudomonas SP}	Back alignment and structure

>2p4z_A Metal-dependent hydrolases of the beta-lactamase superfamily II; metal-dependent hydrolases of the beta-lactamase superfamily hydrolase; 2.10A {Thermoanaerobacter tengcongensis}	Back alignment and structure

>3h3e_A Uncharacterized protein TM1679; structural genomics, surface entropy reduction, ISFI, beta- lactamase superfamily, PSI-2; 2.75A {Thermotoga maritima}	Back alignment and structure

>3rpc_A Possible metal-dependent hydrolase; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics; 1.49A {Veillonella parvula}	Back alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Alignment Graph	Length	Definition	E-value
Query		622
d2i7ta1		451	d.157.1.10 (A:9-459) Cleavage and polyadenylation	1e-116
d2i7xa1		514	d.157.1.10 (A:1-422,A:626-717) Cleavage factor two	1e-108
d2dkfa1		431	d.157.1.10 (A:1-431) Putative RNA-degradation prot	3e-87
d2az4a1		183	d.157.1.10 (A:56-238) Hypothetical protein EF2904	1e-14
d1wraa1		305	d.157.1.8 (A:30-334) Teichoic acid phosphorylcholi	2e-14
d2e7ya1		280	d.157.1.7 (A:1-280) Ribonuclease Z (RNase Z) {Ther	2e-07
d1ztca1		207	d.157.1.11 (A:1-207) Hypothetical protein TM0894 {	4e-05
d1p9ea_		294	d.157.1.5 (A:) Methyl parathion hydrolase {Pseudom	9e-05
d1zkpa1		244	d.157.1.9 (A:1-244) Hypothetical protein BA1088 (B	6e-04
d2aioa1		266	d.157.1.1 (A:23-311) Zn metallo-beta-lactamase {Xa	0.002
d2cfua2		505	d.157.1.13 (A:20-524) Alkylsulfatase SdsA1 {Pseudo	0.002
d2q0ia1		298	d.157.1.14 (A:1-298) Quinolone signal response pro	0.002
d2gmna1		264	d.157.1.1 (A:29-292) Zn metallo-beta-lactamase {Br	0.003

>d2i7ta1 d.157.1.10 (A:9-459) Cleavage and polyadenylation specificity factor subunit 3 {Human (Homo sapiens) [TaxId: 9606]} Length = 451	Back information, alignment and structure


class: Alpha and beta proteins (a+b)
fold: Metallo-hydrolase/oxidoreductase
superfamily: Metallo-hydrolase/oxidoreductase
family: beta-CASP RNA-metabolising hydrolases
domain: Cleavage and polyadenylation specificity factor subunit 3
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  351 bits (900), Expect = e-116
 Identities = 361/442 (81%), Positives = 403/442 (91%)

Query: 6   GAGQEVGRSCIMLEFKNKSIMMDCGIHPGLSGMDALPFVDLVESDQIDLLLISHFHLDHC 65
           GAGQEVGRSCI+LEFK + IM+DCGIHPGL GMDALP++DL++  +IDLLLISHFHLDHC
Sbjct: 10  GAGQEVGRSCIILEFKGRKIMLDCGIHPGLEGMDALPYIDLIDPAEIDLLLISHFHLDHC 69

Query: 66  GALPWFLLKTGFKGRCFMTHATKAIYRWLLSDYIKVSNISTEQMLYTESDLEKSMDKIET 125
           GALPWFL KT FKGR FMTHATKAIYRWLLSDY+KVSNIS + MLYTE+DLE+SMDKIET
Sbjct: 70  GALPWFLQKTSFKGRTFMTHATKAIYRWLLSDYVKVSNISADDMLYTETDLEESMDKIET 129

Query: 126 INFHEEKDVNGIKFSAYNAGHVLGAAMFLIEIAGVKILYTGDFSRQEDRHLMAAEIPPVK 185
           INFHE K+V GIKF  Y+AGHVLGAAMF+IEIAGVK+LYTGDFSRQEDRHLMAAEIP +K
Sbjct: 130 INFHEVKEVAGIKFWCYHAGHVLGAAMFMIEIAGVKLLYTGDFSRQEDRHLMAAEIPNIK 189

Query: 186 PDILITESTYGTHVHEQREEREGRFTSLIHDIVNRGGRCLIPVFALGRAQELLLILDEYW 245
           PDILI ESTYGTH+HE+REERE RF + +HDIVNRGGR LIPVFALGRAQELLLILDEYW
Sbjct: 190 PDILIIESTYGTHIHEKREEREARFCNTVHDIVNRGGRGLIPVFALGRAQELLLILDEYW 249

Query: 246 SLHPELHDIPIYYASSLAKKCMSVYQTYINAMNDRIRRQISINNPFVFKHISNLKGIDHF 305
             HPELHDIPIYYASSLAKKCM+VYQTY+NAMND+IR+QI+INNPFVFKHISNLK +DHF
Sbjct: 250 QNHPELHDIPIYYASSLAKKCMAVYQTYVNAMNDKIRKQININNPFVFKHISNLKSMDHF 309

Query: 306 EDIGPCVVMASPGMMQSGLSRELFEMWCTDAKNGVIIAGYCVEGTLAKTILSEPEEVIGM 365
           +DIGP VVMASPGMMQSGLSRELFE WCTD +NGVIIAGYCVEGTLAK I+SEPEE+  M
Sbjct: 310 DDIGPSVVMASPGMMQSGLSRELFESWCTDKRNGVIIAGYCVEGTLAKHIMSEPEEITTM 369

Query: 366 SGQRLPLKMSVDYISFSAHTDYQQTSEFVRELRPAHVVLVHGEQNEMSRLKAALTREYED 425
           SGQ+LPLKMSVDYISFSAHTDYQQTSEF+R L+P HV+LVHGEQNEM+RLKAAL REYED
Sbjct: 370 SGQKLPLKMSVDYISFSAHTDYQQTSEFIRALKPPHVILVHGEQNEMARLKAALIREYED 429

Query: 426 DPNTSMELYNPRNTVSVDLYFK 447
           +    +E++NPRNT +V L F+
Sbjct: 430 NDEVHIEVHNPRNTEAVTLNFR 451

PyMOL of d2i7ta1

>d2i7xa1 d.157.1.10 (A:1-422,A:626-717) Cleavage factor two protein 2, CFT2 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 514	Back information, alignment and structure

>d2dkfa1 d.157.1.10 (A:1-431) Putative RNA-degradation protein TTHA0252 {Thermus thermophilus [TaxId: 274]} Length = 431	Back information, alignment and structure

>d2az4a1 d.157.1.10 (A:56-238) Hypothetical protein EF2904 {Enterococcus faecalis [TaxId: 1351]} Length = 183	Back information, alignment and structure

>d1wraa1 d.157.1.8 (A:30-334) Teichoic acid phosphorylcholine esterase Pce (LytD), N-terminal domain {Streptococcus pneumoniae [TaxId: 1313]} Length = 305	Back information, alignment and structure

>d2e7ya1 d.157.1.7 (A:1-280) Ribonuclease Z (RNase Z) {Thermotoga maritima [TaxId: 2336]} Length = 280	Back information, alignment and structure

>d1ztca1 d.157.1.11 (A:1-207) Hypothetical protein TM0894 {Thermotoga maritima [TaxId: 2336]} Length = 207	Back information, alignment and structure

>d1p9ea_ d.157.1.5 (A:) Methyl parathion hydrolase {Pseudomonas sp. WBC-3 [TaxId: 165468]} Length = 294	Back information, alignment and structure

>d1zkpa1 d.157.1.9 (A:1-244) Hypothetical protein BA1088 (BAS1016) {Bacillus anthracis [TaxId: 1392]} Length = 244	Back information, alignment and structure

>d2aioa1 d.157.1.1 (A:23-311) Zn metallo-beta-lactamase {Xanthomonas maltophilia [TaxId: 40324]} Length = 266	Back information, alignment and structure

>d2cfua2 d.157.1.13 (A:20-524) Alkylsulfatase SdsA1 {Pseudomonas aeruginosa [TaxId: 287]} Length = 505	Back information, alignment and structure

>d2q0ia1 d.157.1.14 (A:1-298) Quinolone signal response protein PqsE {Pseudomonas aeruginosa [TaxId: 287]} Length = 298	Back information, alignment and structure

>d2gmna1 d.157.1.1 (A:29-292) Zn metallo-beta-lactamase {Bradyrhizobium japonicum [TaxId: 375]} Length = 264	Back information, alignment and structure

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Alignment Graph	Length	Definition	Probability
Query		622
d2i7xa1		514	Cleavage factor two protein 2, CFT2 {Baker's yeast	100.0
d2dkfa1		431	Putative RNA-degradation protein TTHA0252 {Thermus	100.0
d2i7ta1		451	Cleavage and polyadenylation specificity factor su	100.0
d1zkpa1		244	Hypothetical protein BA1088 (BAS1016) {Bacillus an	99.81
d2az4a1		183	Hypothetical protein EF2904 {Enterococcus faecalis	99.77
d2cbna1		305	Ribonuclease Z (RNase Z) {Escherichia coli [TaxId:	99.68
d1y44a1		307	Ribonuclease Z (RNase Z) {Bacillus subtilis [TaxId	99.66
d1p9ea_		294	Methyl parathion hydrolase {Pseudomonas sp. WBC-3	99.56
d1k07a_		262	Zn metallo-beta-lactamase {Fluoribacter gormanii,	99.53
d2aioa1		266	Zn metallo-beta-lactamase {Xanthomonas maltophilia	99.47
d2e7ya1		280	Ribonuclease Z (RNase Z) {Thermotoga maritima [Tax	99.46
d2gmna1		264	Zn metallo-beta-lactamase {Bradyrhizobium japonicu	99.4
d2q0ia1		298	Quinolone signal response protein PqsE {Pseudomona	99.4
d1wraa1		305	Teichoic acid phosphorylcholine esterase Pce (LytD	99.38
d1ztca1		207	Hypothetical protein TM0894 {Thermotoga maritima [	99.36
d1x8ha_		228	Zn metallo-beta-lactamase {Aeromonas hydrophila, C	99.34
d1xtoa_		304	Coenzyme PQQ synthesis protein B, PqqB {Pseudomona	99.28
d1e5da2		249	Rubredoxin oxygen:oxidoreductase (ROO), N-terminal	99.26
d1ycga2		249	Nitric oxide reductase N-terminal domain {Moorella	99.25
d1ko3a_		230	Zn metallo-beta-lactamase {Pseudomonas aeruginosa,	99.2
d1mqoa_		221	Zn metallo-beta-lactamase {Bacillus cereus [TaxId:	99.17
d1m2xa_		219	Zn metallo-beta-lactamase {Chryseobacterium mening	99.1
d1vmea2		250	ROO-like flavoprotein TM0755, N-terminal domain {T	99.1
d1xm8a_		254	Glyoxalase II (hydroxyacylglutathione hydrolase) {	99.08
d1qh5a_		260	Glyoxalase II (hydroxyacylglutathione hydrolase) {	99.03
d1jjta_		220	Zn metallo-beta-lactamase {Pseudomonas aeruginosa,	99.01
d2qeda1		251	Glyoxalase II (hydroxyacylglutathione hydrolase) {	98.97
d1vjna_		209	Hypothetical protein TM0207 {Thermotoga maritima [	98.96
d1znba_		230	Zn metallo-beta-lactamase {Bacteroides fragilis [T	98.94
d2cfua2		505	Alkylsulfatase SdsA1 {Pseudomonas aeruginosa [TaxI	98.81
d2p97a1		200	Hypothetical protein Ava3068 {Anabaena variabilis	98.36
d2e7ya1		280	Ribonuclease Z (RNase Z) {Thermotoga maritima [Tax	87.61
d1zkpa1		244	Hypothetical protein BA1088 (BAS1016) {Bacillus an	81.51

>d2i7xa1 d.157.1.10 (A:1-422,A:626-717) Cleavage factor two protein 2, CFT2 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}	Back information, alignment and structure

class: Alpha and beta proteins (a+b)
fold: Metallo-hydrolase/oxidoreductase
superfamily: Metallo-hydrolase/oxidoreductase
family: beta-CASP RNA-metabolising hydrolases
domain: Cleavage factor two protein 2, CFT2
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=100.00  E-value=3.8e-71  Score=613.66  Aligned_cols=432  Identities=17%  Similarity=0.208  Sum_probs=365.4

Q ss_pred             EecCCCCCCCCcEEEEEECCeEEEEeCCCCCCCCCCCCCCCCCCCCCCCccEEEcCCCchhhhcchHHHHHh----cCCC
Q psy8348           3 TLKGAGQEVGRSCIMLEFKNKSIMMDCGIHPGLSGMDALPFVDLVESDQIDLLLISHFHLDHCGALPWFLLK----TGFK   78 (622)
Q Consensus         3 ~~LG~g~evG~sc~lI~~~~~~ILiD~G~~~~~~~~~~lp~~~~~~~~~Id~IlITH~H~DHiggLp~l~~~----~~~~   78 (622)
                      +++|.|.. +.+|+||++++.+||||||++++.......+......+++||+|||||+|.||+|+||+|+.+    .+++
T Consensus         6 ~~~~~g~g-~~sc~ll~~~~~~iLlDcG~~~~~~~~~~~~~~~~~~~~~IdaillTH~H~DHiGalP~L~~~~~~~~~~~   84 (514)
T d2i7xa1           6 NCCDDGSG-TTVGSVVRFDNVTLLIDPGWNPSKVSYEQCIKYWEKVIPEIDVIILSQPTIECLGAHSLLYYNFTSHFISR   84 (514)
T ss_dssp             EECCSSSS-SCCCEEEEETTEEEEECCCCCTTTSCHHHHHHHHHTTGGGCCEEECCCSSHHHHTTHHHHHHHSHHHHHHT
T ss_pred             EEecCCCc-eeeEEEEEECCeEEEEECCCCcCccchhhhhhhhhcCcccCCEEEECCCChHHHCchHHHHHhcccccCCC
Confidence            34554433 459999999999999999998776543322222234677899999999999999999998765    3468


Q ss_pred             CeEEechhhHHHHHHHHHhHHhhhccc--ccccCCCHHHHHHhhcccEEecCCCeEEeC----CEEEEEEeCCCCCCcEE
Q psy8348          79 GRCFMTHATKAIYRWLLSDYIKVSNIS--TEQMLYTESDLEKSMDKIETINFHEEKDVN----GIKFSAYNAGHVLGAAM  152 (622)
Q Consensus        79 ~~Iy~t~~t~~i~~~~l~d~~~~~~~~--~~~~ly~~~di~~~~~~i~~i~~~~~~~i~----gi~v~~~~aGH~~Gs~~  152 (622)
                      +|||+|++|+++++.++.|+.+.....  ...++|+.+++..+++++..++|+++++++    +++++++++||++||++
T Consensus        85 ~pIy~T~~T~~l~~~~l~d~~~~~~~~~~~~~~~~~~~dv~~~~~~~~~~~y~e~~~i~~~~~~~~~~~~~aGHilGsa~  164 (514)
T d2i7xa1          85 IQVYATLPVINLGRVSTIDSYASAGVIGPYDTNKLDLEDIEISFDHIVPLKYSQLVDLRSRYDGLTLLAYNAGVCPGGSI  164 (514)
T ss_dssp             CEEEEEHHHHHHHHHHHHHHHHHTTSSSSBTTCCSCHHHHHHHHHTSEEECTTCCEEETTTTTTEEEEEEECSSSTTCEE
T ss_pred             cCEEeCHHHHHHHHHHHHHHHHHhhhhcccccCCCCHHHHHHHHHhcccCCCCCeEEecCCcccEEEEEccCCCCCCceE
Confidence            999999999999999999988766543  345789999999999999999999999985    69999999999999999


Q ss_pred             EEEEECCEEEEEEcCCCCCccccccccCCC--------CCCCcEEEEcccCCCCCCchhhhHHHHHHHHHHHHHHcCCeE
Q psy8348         153 FLIEIAGVKILYTGDFSRQEDRHLMAAEIP--------PVKPDILITESTYGTHVHEQREEREGRFTSLIHDIVNRGGRC  224 (622)
Q Consensus       153 ~~I~~~~~~IlytGD~~~~~~~~l~~a~~~--------~~~~DvLI~EsTyg~~~~~~~~~~~~~~~~~i~~~l~~gg~v  224 (622)
                      |.|+.++++|+||||++...++++..+.++        ....|.+++++||+...++++.+++++|.+.+.+++++||+|
T Consensus       165 ~~I~~~~~~IvytGD~~~~~~~~l~~~~~~~~~~~~~~~~~~~~lli~~t~~~~~~~~~~~~~~~l~~~i~~~~~~gG~V  244 (514)
T d2i7xa1         165 WCISTYSEKLVYAKRWNHTRDNILNAASILDATGKPLSTLMRPSAIITTLDRFGSSQPFKKRSKIFKDTLKKGLSSDGSV  244 (514)
T ss_dssp             EEEECSSCEEEECSSCCSSCCSSCCCCTTBCTTSCBCSTTSSCSEEEECCSCCCCSSCHHHHHHHHHHHHHHHTSTTCEE
T ss_pred             EEEEECCeEEEEEeccCCCCCccCCCccccccccccccccCCCEEEEEcCCCCCCCCChHHHHHHHHHHHHHHHhCCCEE
Confidence            999999999999999999988887665432        235677788888888888889999999999999999999999


Q ss_pred             EEeecccchHHHHHHHHHHHHHhCC---CCCCccEEEECchHHHHHHHHHHhHHhhhHHHHHHHh---cCCCcccccccc
Q psy8348         225 LIPVFALGRAQELLLILDEYWSLHP---ELHDIPIYYASSLAKKCMSVYQTYINAMNDRIRRQIS---INNPFVFKHISN  298 (622)
Q Consensus       225 liP~falGR~qEll~iL~~~~~~~~---~l~~ipI~~~s~~a~~~~~~y~~~~~~~~~~i~~~~~---~~npf~f~~i~~  298 (622)
                      |||+||+||+||++.+|+++|.++.   ...++|||++|+++.+++++|++|.+||++.+++.+.   ..+||.|+++..
T Consensus       245 lIP~fa~gR~QEil~~l~~~~~~~~~~~~~~~~pI~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~pf~~~~~~~  324 (514)
T d2i7xa1         245 IIPVDMSGKFLDLFTQVHELLFESTKINAHTQVPVLILSYARGRTLTYAKSMLEWLSPSLLKTWENRNNTSPFEIGSRIK  324 (514)
T ss_dssp             EEEECTTTHHHHHHHHHHHHHTTC-------CCCEEEECTTTTHHHHHHHTCGGGSCHHHHHHHHSSSSCCTTCCTTTEE
T ss_pred             EEEEcCchHHHHHHHHHHHHHHHHHhhccCCCceEEEEChHHHHHHHHHHHhHhhcCHHHHHHHhhhcCCCchhccCcee
Confidence            9999999999999999999997653   3457899999999999999999999999999988763   468999999988


Q ss_pred             cccccccc-cCCCeEEEecCCCCCcchHHHHHHHHcCCCCCeEEEe--ccCCCCCcccccccCCce--------------
Q psy8348         299 LKGIDHFE-DIGPCVVMASPGMMQSGLSRELFEMWCTDAKNGVIIA--GYCVEGTLAKTILSEPEE--------------  361 (622)
Q Consensus       299 l~~~~~~~-~~~p~Vvias~gml~~G~s~~~l~~~~~d~~n~vil~--gy~~~gt~~~~l~~~~~~--------------  361 (622)
                      +++.+.+. ..+||||+||++|   |.++++|++|++|++|+|+||  ||+.+||+++.+......              
T Consensus       325 i~~~~~l~~~~~p~VIiat~~~---G~~~~~l~~~a~d~~n~Vi~t~~g~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~  401 (514)
T d2i7xa1         325 IIAPNELSKYPGSKICFVSEVG---ALINEVIIKVGNSEKTTLILTKPSFECASSLDKILEIVEQDERNWKTFPEDGKSF  401 (514)
T ss_dssp             ECCGGGGGGCCSCEEEEEESCH---HHHHHHHHHHSSCTTEEEEECSSCCTTCHHHHHHHHHHHTCC--------CCCCE
T ss_pred             ccCHHHHHhccCCcEEEEcCCC---chHHHHHHHHhcCCCCEEEEecCCCcccccHHHHHhhhhhhcccccccccccccc
Confidence            77665443 3789999999986   999999999999999999998  999999998766421100              


Q ss_pred             ------------------------------------eeeccCeEeeceeeEEEEecccCCCHHHHHHHHHHhCCCeEEEE
Q psy8348         362 ------------------------------------VIGMSGQRLPLKMSVDYISFSAHTDYQQTSEFVRELRPAHVVLV  405 (622)
Q Consensus       362 ------------------------------------~~~~~g~~i~~~~~v~~i~fS~Had~~el~~~i~~l~P~~Vilv  405 (622)
                                                          .....+..++++|+|..++||+|||+++|.+|++.++|++||||
T Consensus       402 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~v~~i~~SgHad~~el~~~~~~~~P~~vvlv  481 (514)
T d2i7xa1         402 LCDNYISIDTIKEEPLSKEETNFDNLDYLKIDKTLSKRTISTVNVQLKCSVVILNLQSLVDQRSASIIWPSLKSRKIVLS  481 (514)
T ss_dssp             ECCEEEEEEEEEEEESCSCCCCCSCCGGGSCSSCCEEEEEEEEEEEECSEEEECCCCCSCCHHHHHHHGGGSCCSEEEEC
T ss_pred             ccCcceeecccccccccccccCcccccccccccccceeecccceEEEEEEEEEEEeeecCCHHHHHHHHHhhCCCEEEEe
Confidence                                                00122456789999999999999999999999999999999999


Q ss_pred             cCChHHHHHHHHHHHHhhcCCCCCceEEeeCCCCcEEEEe
Q psy8348         406 HGEQNEMSRLKAALTREYEDDPNTSMELYNPRNTVSVDLY  445 (622)
Q Consensus       406 HGe~~~~~~l~~~l~~~~~~~~~~~~~v~~p~ng~~v~l~  445 (622)
                      |||+.++.++++.|.++       ++++++|++||+++|.
T Consensus       482 HGe~~~~~~~a~~l~~~-------g~~v~~p~~g~~ie~~  514 (514)
T d2i7xa1         482 APKQIQNEEITAKLIKK-------NIEVVNMPLNKIVEFS  514 (514)
T ss_dssp             SCGGGSCHHHHHHHHHT-------TCEEEECCSSCCEEEC
T ss_pred             CCCHHHHHHHHHHHHHC-------CCeEEecCCCCEEeeC
Confidence            99999999999988764       3679999999999983

PyMOL of d2i7xa1

>d2dkfa1 d.157.1.10 (A:1-431) Putative RNA-degradation protein TTHA0252 {Thermus thermophilus [TaxId: 274]}	Back information, alignment and structure

>d2i7ta1 d.157.1.10 (A:9-459) Cleavage and polyadenylation specificity factor subunit 3 {Human (Homo sapiens) [TaxId: 9606]}	Back information, alignment and structure

>d1zkpa1 d.157.1.9 (A:1-244) Hypothetical protein BA1088 (BAS1016) {Bacillus anthracis [TaxId: 1392]}	Back information, alignment and structure

>d2az4a1 d.157.1.10 (A:56-238) Hypothetical protein EF2904 {Enterococcus faecalis [TaxId: 1351]}	Back information, alignment and structure

>d2cbna1 d.157.1.7 (A:1-305) Ribonuclease Z (RNase Z) {Escherichia coli [TaxId: 562]}	Back information, alignment and structure

>d1y44a1 d.157.1.7 (A:1-307) Ribonuclease Z (RNase Z) {Bacillus subtilis [TaxId: 1423]}	Back information, alignment and structure

>d1p9ea_ d.157.1.5 (A:) Methyl parathion hydrolase {Pseudomonas sp. WBC-3 [TaxId: 165468]}	Back information, alignment and structure

>d1k07a_ d.157.1.1 (A:) Zn metallo-beta-lactamase {Fluoribacter gormanii, (Legionella gormanii) FEZ-1 [TaxId: 464]}	Back information, alignment and structure

>d2aioa1 d.157.1.1 (A:23-311) Zn metallo-beta-lactamase {Xanthomonas maltophilia [TaxId: 40324]}	Back information, alignment and structure

>d2e7ya1 d.157.1.7 (A:1-280) Ribonuclease Z (RNase Z) {Thermotoga maritima [TaxId: 2336]}	Back information, alignment and structure

>d2gmna1 d.157.1.1 (A:29-292) Zn metallo-beta-lactamase {Bradyrhizobium japonicum [TaxId: 375]}	Back information, alignment and structure

>d2q0ia1 d.157.1.14 (A:1-298) Quinolone signal response protein PqsE {Pseudomonas aeruginosa [TaxId: 287]}	Back information, alignment and structure

>d1wraa1 d.157.1.8 (A:30-334) Teichoic acid phosphorylcholine esterase Pce (LytD), N-terminal domain {Streptococcus pneumoniae [TaxId: 1313]}	Back information, alignment and structure

>d1ztca1 d.157.1.11 (A:1-207) Hypothetical protein TM0894 {Thermotoga maritima [TaxId: 2336]}	Back information, alignment and structure

>d1x8ha_ d.157.1.1 (A:) Zn metallo-beta-lactamase {Aeromonas hydrophila, CphA [TaxId: 644]}	Back information, alignment and structure

>d1xtoa_ d.157.1.6 (A:) Coenzyme PQQ synthesis protein B, PqqB {Pseudomonas putida [TaxId: 303]}	Back information, alignment and structure

>d1e5da2 d.157.1.3 (A:2-250) Rubredoxin oxygen:oxidoreductase (ROO), N-terminal domain {Desulfovibrio gigas [TaxId: 879]}	Back information, alignment and structure

>d1ycga2 d.157.1.3 (A:2-250) Nitric oxide reductase N-terminal domain {Moorella thermoacetica [TaxId: 1525]}	Back information, alignment and structure

>d1ko3a_ d.157.1.1 (A:) Zn metallo-beta-lactamase {Pseudomonas aeruginosa, VIM-2 [TaxId: 287]}	Back information, alignment and structure

>d1mqoa_ d.157.1.1 (A:) Zn metallo-beta-lactamase {Bacillus cereus [TaxId: 1396]}	Back information, alignment and structure

>d1m2xa_ d.157.1.1 (A:) Zn metallo-beta-lactamase {Chryseobacterium meningosepticum, carbapenemase BLAB-1 [TaxId: 238]}	Back information, alignment and structure

>d1vmea2 d.157.1.3 (A:1-250) ROO-like flavoprotein TM0755, N-terminal domain {Thermotoga maritima [TaxId: 2336]}	Back information, alignment and structure

>d1xm8a_ d.157.1.2 (A:) Glyoxalase II (hydroxyacylglutathione hydrolase) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}	Back information, alignment and structure

>d1qh5a_ d.157.1.2 (A:) Glyoxalase II (hydroxyacylglutathione hydrolase) {Human (Homo sapiens) [TaxId: 9606]}	Back information, alignment and structure

>d1jjta_ d.157.1.1 (A:) Zn metallo-beta-lactamase {Pseudomonas aeruginosa, IMP-1 [TaxId: 287]}	Back information, alignment and structure

>d2qeda1 d.157.1.2 (A:1-251) Glyoxalase II (hydroxyacylglutathione hydrolase) {Salmonella typhimurium [TaxId: 90371]}	Back information, alignment and structure

>d1vjna_ d.157.1.4 (A:) Hypothetical protein TM0207 {Thermotoga maritima [TaxId: 2336]}	Back information, alignment and structure

>d1znba_ d.157.1.1 (A:) Zn metallo-beta-lactamase {Bacteroides fragilis [TaxId: 817]}	Back information, alignment and structure

>d2cfua2 d.157.1.13 (A:20-524) Alkylsulfatase SdsA1 {Pseudomonas aeruginosa [TaxId: 287]}	Back information, alignment and structure

>d2p97a1 d.157.1.12 (A:1-200) Hypothetical protein Ava3068 {Anabaena variabilis [TaxId: 1172]}	Back information, alignment and structure

>d2e7ya1 d.157.1.7 (A:1-280) Ribonuclease Z (RNase Z) {Thermotoga maritima [TaxId: 2336]}	Back information, alignment and structure

>d1zkpa1 d.157.1.9 (A:1-244) Hypothetical protein BA1088 (BAS1016) {Bacillus anthracis [TaxId: 1392]}	Back information, alignment and structure