Diaphorina citri psyllid: psy8448

Local Sequence Feature Prediction

Prediction and Method	Result

Residue Number Marker

Protein Sequence

Secondary Structure (Consensus)

Disordered Region (Consensus)

Transmembrane Helix (Consensus)

Signal Peptide (Consensus)

Coiled Coil (COILS)

--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480--

SISENLLARSYFDPREAYPEGQSKEKRRNAIAHALVGEVSVVPPSRLLALLGQALKWQQHQGLLPPGTTIDLFRGKAAMKDQEEEKYPTQLSKQIKFGSKSHVECARFSPDGQYLITGSVDGFIEVWNFTTGKIRKDLKYQAQDNFMLMEEAVMSLAYSRDSEMLASGSQSGKVKIWKIATGQCLRKLEKAHSLGVTCIQFSRDNSQILTASFDTYVRIHGLKSGKMLKEFRGHSSFVNDITFTADGHSVLSASSDGTVKMWNLKTTECTSTFKSLGASDIAVNSIHLLPKNTEHFVVCNKTNTVVIMNMQGQIVRSLSSGKREGGDFLCCTTSPRGEWIYCVGEDMVLVVRLIQQYLKESNLMKTLQCLQEETGVSLNTVDSVDGFIADINNGHWDTVLKSVQSLKLPEKKLIDLYEQVVLELIELRELGAARSLLRQTDPMIFMKQHEPEVHEKLVIGLTHHPHQNLLGTYSEDGLLRFS

ccccccccccccccccccccccccHHHHHHHHcccEEEEEECcccHHHHHHHcccccEEEEEEcccccEEEccccccccccccEEEccccccccccccccccEEEEEEcccccEEEEEcccccEEEEEcccccEEEEcccccccccccccccEEEEEEcccccEEEEECccccEEEEEcccccEEEEccccccccEEEEEEcccccEEEEEEccccEEEEcccccCEEEEEEcccccEEEEEEcccccEEEEECccccEEEEEcccccEEEEEcccccccccEEEEEEccccccEEEEEcccccEEEEEccccEEEEEcccccccccEEEEEEcccccEEEEEEcccEEEEEEcccccccccccccEEccccccccEEEEECcccccEEEEEEcccccEEEEEEEECccccCEEcEEEEEEEEcccEEEEEEcccEEEEECccccEEEECcccccccEEEEEEcccccEEEEECccccEEEc

*ISENLLARSYFDPREAYPEGQSKEKRRNAIAHALVGEVSVVPPSRLLALLGQALKWQQHQGLLPPGTTIDLFRGKAAMKDQEEEKYPTQLSKQIKFGSKSHVECARFSPDGQYLITGSVDGFIEVWNFTTGKIRKDLKYQAQDNFMLMEEAVMSLAYSRDSEMLASGSQSGKVKIWKIATGQCLRKLEKAHSLGVTCIQFSRDNSQILTASFDTYVRIHGLKSGKMLKEFRGHSSFVNDITFTADGHSVLSASSDGTVKMWNLKTTECTSTFKSLGASDIAVNSIHLLPKNTEHFVVCNKTNTVVIMNMQGQIVRSLSSGKREGGDFLCCTTSPRGEWIYCVGEDMVLVVRLIQQYLKESNLMKTLQCLQEETGVSLNTVDSVDGFIADINNGHWDTVLKSVQSLKLPEKKLIDLYEQVVLELIELRELGAARSLLRQTDPMIFMKQHEPEVHEKLVIGLTHHPHQNLLGTYSEDGLLRFS

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Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries

Annotation	Function Description	Confidence Level	Reference Protein
WD40 repeat-containing protein SMU1		very confident	Q7ZVA0
WD40 repeat-containing protein SMU1		very confident	Q76B40
WD40 repeat-containing protein SMU1		very confident	Q6P4J8

Prediction of Gene Ontology Terms

GO Term	Description	Confidence Level	Parent GO Terms
GO:0005737 [CC]	cytoplasm	confident	GO:0044424, GO:0005575, GO:0044464, GO:0005623, GO:0005622
GO:0071011 [CC]	precatalytic spliceosome	confident	GO:0005575, GO:0032991, GO:0043231, GO:0005634, GO:0044464, GO:0005623, GO:0030529, GO:0044446, GO:0043229, GO:0044428, GO:0044422, GO:0044424, GO:0005622, GO:0043227, GO:0043226, GO:0005681
GO:0071013 [CC]	catalytic step 2 spliceosome	confident	GO:0005575, GO:0032991, GO:0043231, GO:0005634, GO:0044464, GO:0005623, GO:0030529, GO:0044446, GO:0043229, GO:0044428, GO:0044422, GO:0044424, GO:0005622, GO:0043227, GO:0043226, GO:0005681
GO:0007528 [BP]	neuromuscular junction development	probable	GO:0050808, GO:0030154, GO:0048468, GO:0014706, GO:0051146, GO:0061061, GO:0007275, GO:0071840, GO:0007517, GO:0048869, GO:0007519, GO:0016043, GO:0048513, GO:0044699, GO:0032502, GO:0055001, GO:0055002, GO:0032501, GO:0048741, GO:0009987, GO:0009888, GO:0048747, GO:0044767, GO:0044763, GO:0048731, GO:0044707, GO:0048856, GO:0060537, GO:0060538, GO:0008150, GO:0042692
GO:0072553 [BP]	terminal button organization	probable	GO:0050808, GO:0009987, GO:0016043, GO:0044763, GO:0044699, GO:0008150, GO:0071840
GO:0007274 [BP]	neuromuscular synaptic transmission	probable	GO:0044700, GO:0019226, GO:0032501, GO:0044707, GO:0035637, GO:0050877, GO:0009987, GO:0008150, GO:0044763, GO:0023052, GO:0007268, GO:0007267, GO:0007154, GO:0044699, GO:0003008
GO:0040011 [BP]	locomotion	probable	GO:0008150
GO:0002119 [BP]	nematode larval development	probable	GO:0032502, GO:0032501, GO:0044707, GO:0009791, GO:0002164, GO:0008150, GO:0007275, GO:0044699
GO:0003674 [MF]	molecular_function	probable
GO:0048666 [BP]	neuron development	probable	GO:0032502, GO:0048699, GO:0048856, GO:0007399, GO:0030182, GO:0009987, GO:0048869, GO:0030154, GO:0048468, GO:0044767, GO:0032501, GO:0044763, GO:0048731, GO:0008150, GO:0022008, GO:0007275, GO:0044699, GO:0044707
GO:0048644 [BP]	muscle organ morphogenesis	probable	GO:0032502, GO:0007517, GO:0032501, GO:0044707, GO:0048856, GO:0009887, GO:0044767, GO:0048513, GO:0008150, GO:0061061, GO:0048731, GO:0009653, GO:0007275, GO:0044699
GO:0043234 [CC]	protein complex	probable	GO:0005575, GO:0032991
GO:0043232 [CC]	intracellular non-membrane-bounded organelle	probable	GO:0044464, GO:0005623, GO:0005622, GO:0005575, GO:0043229, GO:0043228, GO:0044424, GO:0043226
GO:0031981 [CC]	nuclear lumen	probable	GO:0005575, GO:0043231, GO:0043233, GO:0005634, GO:0044464, GO:0031974, GO:0005622, GO:0044446, GO:0070013, GO:0043229, GO:0044428, GO:0005623, GO:0044424, GO:0043227, GO:0043226, GO:0044422
GO:0044444 [CC]	cytoplasmic part	probable	GO:0005737, GO:0044464, GO:0005623, GO:0005622, GO:0005575, GO:0044424
GO:0000398 [BP]	mRNA splicing, via spliceosome	probable	GO:0090304, GO:0034641, GO:0006807, GO:1901360, GO:0006139, GO:0044260, GO:0071704, GO:0010467, GO:0008380, GO:0044238, GO:0009987, GO:0006725, GO:0000375, GO:0000377, GO:0008150, GO:0008152, GO:0046483, GO:0016070, GO:0016071, GO:0044237, GO:0043170, GO:0006396, GO:0006397
GO:0007638 [BP]	mechanosensory behavior	probable	GO:0009628, GO:0009605, GO:0044708, GO:0050896, GO:0007610, GO:0008150, GO:0009612

Prediction of Enzyme Commission Number

No EC number assigned to the protein, probably not an enzyme!

Spatial Structural Prediction

Structural Models Based on Templates

Template: 2YMU, chain A
Confidence level:very confident
Coverage over the Query: 63-405,444-482
View the alignment between query and template
View the model in PyMOL

Template: 1ERJ, chain A
Confidence level:very confident
Coverage over the Query: 98-350,369-375,407-408,438-439,450-482
View the alignment between query and template
View the model in PyMOL

Template: 1NR0, chain A
Confidence level:very confident
Coverage over the Query: 36-408,434-482
View the alignment between query and template
View the model in PyMOL

Template: 2J04, chain A
Confidence level:confident
Coverage over the Query: 57-355,369-373,409-439,450-475
View the alignment between query and template
View the model in PyMOL