Diaphorina citri psyllid: psy8476

Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-
MSILEFERNQVFQRYLTFCGIGIQNAQLFEMSILEFERNQILLKLARSIFEEQSNLECLVTKIMTEARDLLKCERCAVFLLKSETSEASHLERILERPGRVISERKPLCRRESNNVDIEDILAHTPEDPSIAFSTVFELGGPGGEALVKSPGNTVCNTHSRLATIAKYVASTGQILNIGDVPSWMREEVCNDEDEESDFTTRCILCMPIFNGQKTVIGVAQLINKISERKPLCRRESNNVDIEDILAHTPEDPSIAFSTVFELGGPGGEALVKSPGNTVCNTHSRLATIAKYVASTGQILNIGDVPSWMREEVCNDEDEESDFTTRCILCMPIFNGQKTVIGVAQLINKVTRQPFTDCDVSIFEAFAIFCGLGIHNTQMYENACKLMAKQKVFQRYLTFCGIGIQNAQLFEMSILEFERNQ
cccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHccccEEEEEEcccccccHHHHHHHHccccccccccccccccccccccHHccccccccccccccEEEECcccccccCEEcccccccccccccHHHHHHHHHcccEEcccccccccccccccccccccccEEEEEEEEcEEcccccHHHHHHHHHHHccccccccccccccHHHHHccccccccccccEEEEEEcccccccEEEccccccccccccccHHHHHHHHcccEEECcccccccccccccccccccccEEcEEEEEEEEccccEEEEEEEEEEccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc
*SILEFERNQVFQRYLTFCGIGIQNAQLFEMSILEFERNQILLKLARSIFEEQSNLECLVTKIMTEARDLLKCERCAVFLLKSETSEASHLERILERPGRVISERKPLCRRESNNVDIEDILAHTPEDPSIAFSTVFELGGPGGEALVKSPGNTVCNTHSRLATIAKYVASTGQILNIGDVPSWMREEVCNDEDEESDFTTRCILCMPIFNGQKTVIGVAQLINKISERKPLCRRESNNVDIEDILAHTPEDPSIAFSTVFELGGPGGEALVKSPGNTVCNTHSRLATIAKYVASTGQILNIGDVPSWMREEVCNDEDEESDFTTRCILCMPIFNGQKTVIGVAQLINKVTRQPFTDCDVSIFEAFAIFCGLGIHNTQMYENACKLMAKQKVFQRYLTFCGIGIQNAQLFEMSILE*****
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MSILEFERNQVFQRYLTFCGIGIQNAQLFEMSILEFERNQILLKLARSIFEEQSNLECLVTKIMTEARDLLKCERCAVFLLKSETSEASHLERILERPGRVISERKPLCRRESNNVDIEDILAHTPEDPSIAFSTVFELGGPGGEALVKSPGNTVCNTHSRLATIAKYVASTGQILNIGDVPSWMREEVCNDEDEESDFTTRCILCMPIFNGQKTVIGVAQLINKISERKPLCRRESNNVDIEDILAHTPEDPSIAFSTVFELGGPGGEALVKSPGNTVCNTHSRLATIAKYVASTGQILNIGDVPSWMREEVCNDEDEESDFTTRCILCMPIFNGQKTVIGVAQLINKVTRQPFTDCDVSIFEAFAIFCGLGIHNTQMYENACKLMAKQKVFQRYLTFCGIGIQNAQLFEMSILEFERNQ

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
cGMP-specific 3',5'-cyclic phosphodiesterase Has a role regulating cGMP transport in Malpighian tubule principal cells.confidentQ298P4
cGMP-specific 3',5'-cyclic phosphodiesterase Has a role regulating cGMP transport in Malpighian tubule principal cells.confidentQ9VFI9

Prediction of Gene Ontology Terms ?

GO Term ?Description ?Confidence Level ?Parent GO Terms ?
GO:0016324 [CC]apical plasma membraneprobableGO:0045177, GO:0016020, GO:0044464, GO:0005623, GO:0005575, GO:0071944, GO:0005886, GO:0044425, GO:0044459
GO:0046068 [BP]cGMP metabolic processprobableGO:0009187, GO:0034641, GO:0006807, GO:0019693, GO:0072521, GO:0009259, GO:1901360, GO:0006139, GO:0044710, GO:0071704, GO:0009987, GO:0006725, GO:0009150, GO:0009117, GO:0008152, GO:0055086, GO:0046483, GO:0044238, GO:1901564, GO:1901135, GO:0044237, GO:0006163, GO:0006796, GO:0006793, GO:0019637, GO:0008150, GO:0006753, GO:0044281

Prediction of Enzyme Commission Number ?

No confident prediction of EC number!

Spatial Structural Prediction

Structural Models Based on Templates

Template: 1MC0, chain A
Confidence level:very confident
Coverage over the Query: 38-97,140-388
View the alignment between query and template
View the model in PyMOL
Template: 3BJC, chain A
Confidence level:very confident
Coverage over the Query: 51-68
View the alignment between query and template
View the model in PyMOL
Template: 3BJC, chain A
Confidence level:very confident
Coverage over the Query: 60-101,121-125,140-161
View the alignment between query and template
View the model in PyMOL

Templates for Structure Prediction

ID ?Alignment Graph ?Confidence Level ? View Alignment and Template ?
Query
3lfv, chain Aconfident Alignment | Template Structure