Diaphorina citri psyllid: psy8545

Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------
MDRYSQYSALILTLLMLSFTLVAHWLACLWFVIADYERNRYRQDWDLGWIHTLAERLKVNVSEISHRESYITALYFTCSSLTSVGFGNVSANTSAEKIFSICTMLIGALMHAVVFGNVTAIIQRMYSRRSLYQTKWRDLKEFLTLNQIPKELKQRMQDYFQTMWSLSHGIDVHETLKEFPEELRGDVSMHLHREILQLPIFEAATQGCLKLLSLHIRNNFCAPGEYLIHKGDHLSSIYYLCNGSMEVVQNGMVVAILGKGDLVGCDISMWLSEKNGGSAVGPGAGTGVDPIVKSSCDVKALTYCDLKSVNVVGLVEVLRLYPEYQQEFAHDIQHDLTYNIREGYEAEESDIGLPSLTLPSINEDDEAGEGETSPLSPPSRSPLHIPMSNSPRHTKINMRGAERFRRGELEKKSSVDRLDTQVTSLHHHVATLSQEVRNAIQALQELATTSSNVASNRYPYPLPAHSNPNLPHNTQCPQQRALLQRSSSHPPEMFCWESMDQERYAHCVSQSTQTDYPIDMFESFVKENKLRVLEWLGLKHNVYSKYR
cccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccHHcccccccccccccccHHHHHHHHHHHHHHcccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHccccccHHHHHHcccccHHHHHHHHHHHccccccccccccHHHHHHHHHHccccccccccEEEEccccccEEEEEEEcEEEEEEcccEEEEcccccEEcccHHHHHccccccccccccccccccccccccCEEEEccEEccEEECHHHHHHHHHHcHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHcccHHHHHHHHHHHHHccccccccccccccccccccccccccccccccHHHHHccccccccccccccccccccccccccccccccccccHHHHHHHHcHHHHHHHHccccccccccc
MDRYSQYSALILTLLMLSFTLVAHWLACLWFVIADYERNRYRQDWDLGWIHTLAERLKVNVSEISHRESYITALYFTCSSLTSVGFGNVSANTSAEKIFSICTMLIGALMHAVVFGNVTAIIQRMYSRRSLYQTKWRDLKEFLTLNQIPKELKQRMQDYFQTMWSLSHGIDVHETLKEFPEELRGDVSMHLHREILQLPIFEAATQGCLKLLSLHIRNNFCAPGEYLIHKGDHLSSIYYLCNGSMEVVQNGMVVAILGKGDLVGCDISMWLSEKNGGSAVGPGAGTGVDPIVKSSCDVKALTYCDLKSVNVVGLVEVLRLYPEYQQEFAHDIQHDLTYNIRE***********************************************************************************HHHVATL*******I*****************************************************FCWESM***********STQTDYPIDMFESFVKENKLRVLEWLGLKHNVY****
xxxxxxxxxHHHHHHHHHHHHHHHHHHHHHHHHxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxHHHHHHHHHHHHHHHHHHHHHHHHHxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
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MDRYSQYSALILTLLMLSFTLVAHWLACLWFVIADYERNRYRQDWDLGWIHTLAERLKVNVSEISHRESYITALYFTCSSLTSVGFGNVSANTSAEKIFSICTMLIGALMHAVVFGNVTAIIQRMYSRRSLYQTKWRDLKEFLTLNQIPKELKQRMQDYFQTMWSLSHGIDVHETLKEFPEELRGDVSMHLHREILQLPIFEAATQGCLKLLSLHIRNNFCAPGEYLIHKGDHLSSIYYLCNGSMEVVQNGMVVAILGKGDLVGCDISMWLSEKNGGSAVGPGAGTGVDPIVKSSCDVKALTYCDLKSVNVVGLVEVLRLYPEYQQEFAHDIQHDLTYNIREGYEAEESDIGLPSLTLPSINEDDEAGEGETSPLSPPSRSPLHIPMSNSPRHTKINMRGAERFRRGELEKKSSVDRLDTQVTSLHHHxxxxxxxxxxxxxxxxxxxxxSSNVASNRYPYPLPAHSNPNLPHNTQCPQQRALLQRSSSHPPEMFCWESMDQERYAHCVSQSTQTDYPIDMFESFVKENKLRVLEWLGLKHNVYSKYR

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
Potassium voltage-gated channel subfamily H member 8 Pore-forming (alpha) subunit of voltage-gated potassium channel. Elicits a slowly activating, outward rectifying current. Channel properties may be modulated by cAMP and subunit assembly.confidentQ9QWS8
Potassium voltage-gated channel subfamily H member 8 Pore-forming (alpha) subunit of voltage-gated potassium channel. Elicits a slowly activating, outward rectifying current. Channel properties may be modulated by cAMP and subunit assembly.confidentQ96L42

Prediction of Gene Ontology Terms ?

GO Term ?Description ?Confidence Level ?Parent GO Terms ?
GO:0051291 [BP]protein heterooligomerizationprobableGO:0051259, GO:0022607, GO:0071822, GO:0070271, GO:0043933, GO:0006461, GO:0016043, GO:0065003, GO:0044085, GO:0008150, GO:0071840
GO:0043855 [MF]cyclic nucleotide-gated ion channel activityprobableGO:0022891, GO:0022892, GO:0005215, GO:0005216, GO:0015276, GO:0015075, GO:0022857, GO:0015267, GO:0003674, GO:0022836, GO:0022834, GO:0022803, GO:0022839, GO:0022838
GO:0071805 [BP]potassium ion transmembrane transportprobableGO:0006810, GO:0071804, GO:0006813, GO:0006812, GO:0006811, GO:0009987, GO:0015672, GO:0008150, GO:0034220, GO:0044765, GO:0044763, GO:0030001, GO:0051179, GO:0051234, GO:0055085, GO:0044699
GO:0034765 [BP]regulation of ion transmembrane transportprobableGO:0051049, GO:0050794, GO:0065007, GO:0034762, GO:0008150, GO:0032879, GO:0050789, GO:0043269
GO:0005249 [MF]voltage-gated potassium channel activityprobableGO:0005267, GO:0005261, GO:0003674, GO:0015077, GO:0022843, GO:0022803, GO:0046873, GO:0005215, GO:0005216, GO:0008324, GO:0022891, GO:0022890, GO:0022892, GO:0005244, GO:0015075, GO:0022832, GO:0022857, GO:0015267, GO:0022836, GO:0022839, GO:0022838, GO:0015079
GO:0005887 [CC]integral to plasma membraneprobableGO:0031226, GO:0016021, GO:0016020, GO:0044464, GO:0005623, GO:0005575, GO:0071944, GO:0005886, GO:0044425, GO:0044459, GO:0031224

Prediction of Enzyme Commission Number ?

No EC number assigned to the protein, probably not an enzyme!

Spatial Structural Prediction

Structural Models Based on Templates

Template: 3UKN, chain A
Confidence level:very confident
Coverage over the Query: 129-274,292-342
View the alignment between query and template
View the model in PyMOL
Template: 3BEH, chain A
Confidence level:confident
Coverage over the Query: 11-38,64-129,158-161,191-193
View the alignment between query and template
View the model in PyMOL