Diaphorina citri psyllid: psy8611

Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280
MKSILKQLGGWPVLEDKGLLLDSLESQLSHLHSSVEALALARRDLSVYSAHLAKSLALVSNTEEHASVSRVVSTLGELYERTEGVYAAEAGADLNILAELFRDYVCLIAAVKDTFHARGKIYQTWQSWQIILNKKREAKVKLELAGRSDKSIQAAHEVTEVRIKYLLKTLFNCCPSDSILIVGTQGRTVSGGFRSDICDEQVRVKWEHKVERCQEDFAAISAMIKREYAGFEASRVQEFKDTMVKYLEELMGYQQQEFKDTMVKYLEELMGYQQQVSRIE
ccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHcccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccc
*****KQLGGWPVLEDKGLLLDSLESQLSHLHSSVEALALARRDLSVYSAHLAKSLALVSNTEEHASVSRVVSTLGELYERTEGVYAAEAGADLNILAELFRDYVCLIAAVKDTFHARGKIYQTWQSWQIILNKKREAKVKLELAGRSDKSIQAAHEVTEVRIKYLLKTLFNCCPSDSILIVGTQG***SGGFRSDICDEQVRVKWEHKVERCQEDFAAISAMIKREYAGFEASRVQEFKDTMVKYLEELMGYQQQEFKDTMVKYLEELMGYQQQ*****
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MKSILKQLGGWPVLEDKGLLLDSLESQLSHLHSSVEALALARRDLSVYSAHLAKSLALVSNTEEHASVSRVVSTLGELYERTEGVYAAEAGADLNILAELFRDYVCLIAAVKDTFHARGKIYQTWQSWQIILNKKREAKVKLELAGRSDKSIQAAHEVTEVRIKYLLKTLFNCCPSDSILIVGTQGRTVSGGFRSDICDEQVRVKWEHKVERCQEDFAAISAMIKREYAGFEASRxxxxxxxxxxxxxxxxxxxxxEFKDTMVKYLEELMGYQQQVSRIE

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

No confident close homologs for annotation transfering were detected in SWISSPROT

Prediction of Gene Ontology Terms ?

GO Term ?Description ?Confidence Level ?Parent GO Terms ?
GO:0016020 [CC]membraneprobableGO:0005575
GO:0035091 [MF]phosphatidylinositol bindingprobableGO:0043168, GO:0005543, GO:0008289, GO:0043167, GO:0003674, GO:0005488
GO:0005769 [CC]early endosomeprobableGO:0005737, GO:0043231, GO:0043227, GO:0044464, GO:0043229, GO:0005623, GO:0005622, GO:0005575, GO:0044444, GO:0044424, GO:0005768, GO:0043226

Prediction of Enzyme Commission Number ?

No confident prediction of EC number!

Spatial Structural Prediction

Structural Models Based on Templates

Template: 3DYT, chain A
Confidence level:very confident
Coverage over the Query: 7-123,134-156,209-275
View the alignment between query and template
View the model in PyMOL
Template: 4AVM, chain A
Confidence level:confident
Coverage over the Query: 9-149,200-276
View the alignment between query and template
View the model in PyMOL
Template: 3I2W, chain A
Confidence level:probable
Coverage over the Query: 37-148,190-276
View the alignment between query and template
View the model in PyMOL