Diaphorina citri psyllid: psy8620


Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-----
MFQNDLHRAMQKSQSALSQQLMILSATFVCGIQHFQRAGHRHLNLFQATYYVVVTFSTVGYGDFVPDIWPSQLYMVIMICVALIVLPTQFEQLAFTWMERQKLGGSYSSHRAQSEKHVVVCSTTLHADTIMDFLNEFYAHPLLQNYYVVLLSPMELDTTMRMILQVPIWAQRVIYIQGSCLKDGDLARARMNEAEACFVLAARNYSDKTAADEHTILRSWAVKDFAPDVPQYVQIFRPENKLHVKFAEFIVCEDELKYALLANNCTCPGASTLVTLLLHTSRGQEGQISQEEWHRLYGRCSGNEIYHILLADSRFFGEEGQISQEEWHRLYGRCSGNEIYHILLADSRFFGEYEGKSFTYASFHSHRKYGMKITKDDMWIRTYGRLYQKLCSTTCEIPIGIYRTQDMSSIESPQPRESNPRPSAHKADAPPSKLTRLAFYSVEFYLFSLDDLLRAGILLAENVVVVNKELSNSAEEDTLADCNTIVAVQKLTSLAFYSVEFYLFSLDDLLRAGILLAENVVVVNKELSNSAEEDTLADCNTIVAVQTMFKFFPGIRTITELSQSSNMRFMQFRAQDKYALHLSKMEKKEKERGSHISYMFRLPFAAGSVFSASMLDTLLYQAFVKDYVITFIRLLLGVDQAPGSGFLTSMKITKDDMWIRTYGRLYQKLCSTTCEIPIGIYRTQDMSSIESPQVM
ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHEEEEEEEccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccEEEEEEccccHHHHHHHHHHHHccccccccEEEEEccccccHHHHHHHccccccccEEEEEcccccHHHHHHcccccccEEEEEcccccccccccHHHHHHHHHHHHHccccccEEEEEccccccHHHccccEEEEHHHHHHHHHHHHcccccHHHHHHHHHHccccccccccHHHHHHHHHcccccEEEEEEccccccccccHHHHHHHHHHHHcccccccEEEEEccccccccccccccCEEEccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHccccEEEEcccccccEEEEEEcccccccccccccccHHHHHHHccccccEEEEEEcccHHHHHHHccccccEEEEEccccccccccccHHHHHHHHHHHHHHHHcccccEEEEcccccccccHHHccccHHHHHHHHHHHHHHHcccccccccccccccccccHHHHHHHHHHHHcccHHHHHHHHHHHccccccccccEEEccccccccccccHHHHHHHHHcccccCEEEEEEccccccccccccc
MFQNDLHRAMQKSQSALSQQLMILSATFVCGIQHFQRAGHRHLNLFQATYYVVVTFSTVGYGDFVPDIWPSQLYMVIMICVALIVLPTQFEQLAFTWMERQKL**********SEKHVVVCSTTLHADTIMDFLNEFYAHPLLQNYYVVLLSPMELDTTMRMILQVPIWAQRVIYIQGSCLKDGDLARARMNEAEACFVLAARNYSDKTAADEHTILRSWAVKDFAPDVPQYVQIFRPENKLHVKFAEFIVCEDELKYALLANNCTCPGASTLVTLLLHTSRGQEGQISQEEWHRLYGRCSGNEIYHILLADSRFFGEEGQISQEEWHRLYGRCSGNEIYHILLADSRFFGEYEGKSFTYASFHSHRKYGMKITKDDMWIRTYGRLYQKLCSTTCEIPIGIYRT**************************PSKLTRLAFYSVEFYLFSLDDLLRAGILLAENVVVVNKELSNSAEEDTLADCNTIVAVQKLTSLAFYSVEFYLFSLDDLLRAGILLAENVVVVNKELSNSAEEDTLADCNTIVAVQTMFKFFPGIRTITELSQSSNMRFMQFRAQDKYAL**************HISYMFRLPFAAGSVFSASMLDTLLYQAFVKDYVITFIRLLLGVDQAPGSGFLTSMKITKDDMWIRTYGRLYQKLCSTTCEIPIGIYRTQDM*********
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxHHHHHHHHHHHHHHHxxxxxxxxxxHHHHHHHHHHHHHHxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
MFQNDLHRAMQKSQSALSQQLMILSATFVCGIQHFQRAGHRHLNLFQATYYVVVTFSTVGYGDFVPDIWPSQLYMVIMICVALIVLPTQFEQLAFTWMERQKLGGSYSSHRAQSEKHVVVCSTTLHADTIMDFLNEFYAHPLLQNYYVVLLSPMELDTTMRMILQVPIWAQRVIYIQGSCLKDGDLARARMNEAEACFVLAARNYSDKTAADEHTILRSWAVKDFAPDVPQYVQIFRPENKLHVKFAEFIVCEDELKYALLANNCTCPGASTLVTLLLHTSRGQEGQISQEEWHRLYGRCSGNEIYHILLADSRFFGEEGQISQEEWHRLYGRCSGNEIYHILLADSRFFGEYEGKSFTYASFHSHRKYGMKITKDDMWIRTYGRLYQKLCSTTCEIPIGIYRTQDMSSIESPQPRESNPRPSAHKADAPPSKLTRLAFYSVEFYLFSLDDLLRAGILLAENVVVVNKELSNSAEEDTLADCNTIVAVQKLTSLAFYSVEFYLFSLDDLLRAGILLAENVVVVNKELSNSAEEDTLADCNTIVAVQTMFKFFPGIRTITELSQSSNMRFMQFRAQDKYALHLSKMEKKEKERGSHISYMFRLPFAAGSVFSASMLDTLLYQAFVKDYVITFIRLLLGVDQAPGSGFLTSMKITKDDMWIRTYGRLYQKLCSTTCEIPIGIYRTQDMSSIESPQVM

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
Potassium channel subfamily T member 1 Outwardly rectifying potassium channel subunit that may co-assemble with other Slo-type channel subunits. Activated by high intracellular sodium or chloride levels. Activated upon stimulation of G-protein coupled receptors, such as CHRM1 and GRIA1. May be regulated by calcium in the absence of sodium ions (in vitro).confidentQ5JUK3
Potassium channel subfamily T member 1 Generates outwardly rectifying currents that are suppressed by elevation of intracellular calcium.confidentQ8QFV0
Potassium channel subfamily T member 2 Outward rectifying potassium channel. Produces rapidly activating outward rectifier K(+) currents. Activated by high intracellular sodium and chloride levels. Channel activity is inhibited by ATP and by inhalation anesthetics, such as isoflurane. Inhibited upon stimulation of G-protein coupled receptors, such as CHRM1 and GRIA1.confidentQ6UVM4

Prediction of Gene Ontology Terms ?

GO Term ?Description ?Confidence Level ?Parent GO Terms ?
GO:0048812 [BP]neuron projection morphogenesisprobableGO:0032502, GO:0044707, GO:0030030, GO:0030154, GO:0048468, GO:0031175, GO:0009653, GO:0007275, GO:0071840, GO:0000902, GO:0048869, GO:0016043, GO:0032989, GO:0044699, GO:0048666, GO:0032501, GO:0030182, GO:0009987, GO:0044767, GO:0044763, GO:0048731, GO:0022008, GO:0032990, GO:0048699, GO:0048858, GO:0007399, GO:0048856, GO:0008150
GO:0016021 [CC]integral to membraneprobableGO:0005575, GO:0044425, GO:0016020, GO:0031224
GO:0006813 [BP]potassium ion transportprobableGO:0006812, GO:0006811, GO:0006810, GO:0051179, GO:0044765, GO:0030001, GO:0008150, GO:0051234, GO:0015672, GO:0044699
GO:0015271 [MF]outward rectifier potassium channel activityprobableGO:0005267, GO:0005261, GO:0003674, GO:0015077, GO:0022843, GO:0022803, GO:0046873, GO:0005215, GO:0005216, GO:0008324, GO:0022891, GO:0022890, GO:0022892, GO:0005244, GO:0015075, GO:0022832, GO:0022857, GO:0015267, GO:0022836, GO:0005249, GO:0022839, GO:0022838, GO:0015079
GO:0030424 [CC]axonprobableGO:0044464, GO:0005623, GO:0005575, GO:0097458, GO:0043005, GO:0042995

Prediction of Enzyme Commission Number ?

No EC number assigned to the protein, probably not an enzyme!


Spatial Structural Prediction

Structural Models Based on Templates

Template: 3NAF, chain A
Confidence level:very confident
Coverage over the Query: 102-300,335-421,432-576,593-687
View the alignment between query and template
View the model in PyMOL
Template: 3NAF, chain A
Confidence level:very confident
Coverage over the Query: 113-313,335-399
View the alignment between query and template
View the model in PyMOL
Template: 1LNQ, chain A
Confidence level:very confident
Coverage over the Query: 28-97,116-281,335-398
View the alignment between query and template
View the model in PyMOL
Template: 2QKS, chain A
Confidence level:confident
Coverage over the Query: 2-124
View the alignment between query and template
View the model in PyMOL