Diaphorina citri psyllid: psy8766


Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-----
MTGADLNVLDKEKRSPLLLAASRGGWKTVLTLVRNKANILLKDINRRNILHLLVLNGGGHIKEFAEEVAAVFLGEGEASQGIQNLLNEKDKTGCSPLHYASREGHIISLENLINLGACINLKNNSNESPLHLAAR
cccccccccccccccHHHHHHHcccHHHHHHHHHcccccccccccccHHHHHHHHHccccccccHHHHHHHHHHcccccccccccccccccccccHHHHHHHcccHHHHHHHHHccccccccccccccHHHHHcc
MTGADLNVLDKEKRSPLLLAASRGGWKTVLTLVRNKANILLKDINRRNILHLLVLNGGGHIKEFAEEVAAVFLGEGEASQGIQNLLNEKDKTGCSPLHYASREGHIISLENLINLGACINLKNNSNESPLHLAAR
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MTGADLNVLDKEKRSPLLLAASRGGWKTVLTLVRNKANILLKDINRRNILHLLVLNGGGHIKEFAEEVAAVFLGEGEASQGIQNLLNEKDKTGCSPLHYASREGHIISLENLINLGACINLKNNSNESPLHLAAR

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
Transient receptor potential cation channel subfamily A member 1 Essential for thermotaxis by sensing environmental temperature. Receptor-activated non-selective cation channel involved in detection of sensations such as temperature. Involved in heat nociception by being activated by warm temperature of about 24-29 degrees Celsius.confidentQ7Z020

Prediction of Gene Ontology Terms ?

GO Term ?Description ?Confidence Level ?Parent GO Terms ?
GO:0034605 [BP]cellular response to heatprobableGO:0009628, GO:0051716, GO:0050896, GO:0009987, GO:0008150, GO:0006950, GO:0044763, GO:0033554, GO:0009266, GO:0009408, GO:0044699
GO:0005488 [MF]bindingprobableGO:0003674
GO:0016567 [BP]protein ubiquitinationprobableGO:0071704, GO:0044267, GO:0044260, GO:0044238, GO:0019538, GO:0009987, GO:0070647, GO:0006464, GO:0043170, GO:0032446, GO:0043412, GO:0036211, GO:0008150, GO:0044237, GO:0008152
GO:0006357 [BP]regulation of transcription from RNA polymerase II promoterprobableGO:0009889, GO:0019219, GO:0080090, GO:0019222, GO:0060255, GO:0031326, GO:0031323, GO:0051252, GO:2000112, GO:0050794, GO:0050789, GO:0006355, GO:0010556, GO:0065007, GO:0051171, GO:2001141, GO:0008150, GO:0010468
GO:0007600 [BP]sensory perceptionprobableGO:0032501, GO:0044707, GO:0050877, GO:0008150, GO:0044699, GO:0003008
GO:0048522 [BP]positive regulation of cellular processprobableGO:0048518, GO:0008150, GO:0065007, GO:0050789, GO:0050794
GO:0005886 [CC]plasma membraneprobableGO:0005575, GO:0044464, GO:0016020, GO:0071944, GO:0005623
GO:1901700 [BP]response to oxygen-containing compoundprobableGO:0042221, GO:0050896, GO:0008150
GO:0033038 [MF]bitter taste receptor activityprobableGO:0004930, GO:0038023, GO:0008527, GO:0060089, GO:0004888, GO:0003674, GO:0004872, GO:0004871
GO:0043232 [CC]intracellular non-membrane-bounded organelleprobableGO:0044464, GO:0005623, GO:0005622, GO:0005575, GO:0043229, GO:0043228, GO:0044424, GO:0043226
GO:0031981 [CC]nuclear lumenprobableGO:0005575, GO:0043231, GO:0043233, GO:0005634, GO:0044464, GO:0031974, GO:0005622, GO:0044446, GO:0070013, GO:0043229, GO:0044428, GO:0005623, GO:0044424, GO:0043227, GO:0043226, GO:0044422
GO:0000323 [CC]lytic vacuoleprobableGO:0005737, GO:0043231, GO:0005773, GO:0044464, GO:0043229, GO:0005623, GO:0005622, GO:0005575, GO:0044444, GO:0044424, GO:0043227, GO:0043226
GO:0051179 [BP]localizationprobableGO:0008150
GO:0033993 [BP]response to lipidprobableGO:0042221, GO:0050896, GO:0008150, GO:0010033
GO:0015267 [MF]channel activityprobableGO:0022803, GO:0022857, GO:0003674, GO:0005215
GO:0009593 [BP]detection of chemical stimulusprobableGO:0008150, GO:0042221, GO:0050896, GO:0051606

Prediction of Enzyme Commission Number ?

No EC number assigned to the protein, probably not an enzyme!


Spatial Structural Prediction

Structural Models Based on Templates

Template: 1N11, chain A
Confidence level:very confident
Coverage over the Query: 2-134
View the alignment between query and template
View the model in PyMOL