Diaphorina citri psyllid: psy8823


Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380------
MESKGFIFGFVLFFLINLTTAQRTPTISYISQEQIKDIGGTVELKCSVQYAQDYPVIWMKVDRNKVTEPLPISTGSSLIIRDSRFAIRYDTASSTYTLLVKDIQETDAGYYRCQVIIGINNKISAEVDLQVRRPPVISDNSTRSLVVSEGQPVQLECFAGGHPTPRISWRRENNAILPTGGSIYRGSILKIPQITKEDRGTYYCVAENGVGKGTRRNIAVEVEFAPVITVPKPRLGQALQYDMDLECHVEAYPPPAIVWIKEDTQQVLTNNQHYSISHFATADEFTDTTIRVITIEKRQYGSYICRAANKLGTSEKTVELFESIIPVCPPQTQPSELLPLRNVNMAVIFAEQPTSWEPQRKQLNCSSLLYQCVLPLVDRQDRLMHP
ccccccHHHHHHEEEEEEEEECcccEEEEcccEEEEEccccEEEEEEEcccccccEEEEEcccccccccccccccccCECccccEEEEEcccccEEEEEEccccccccEEEEEEEEEcccccEEEEEEEEEEcccCEECcccccEEEEccccEEEEEEEcEEcccEEEEEEccccccccccEEEcccEEEEccccccccCEEEEEEEccccccCEEEEEEEEECccCEECccccEEEEccccEEEEEEEEECccccEEEEEccEEEECcccccEEEEEEEEcccccCEEEEEccccccccEEEEEEEEEccccEEEEEEEEEECccccccccccEEECcccEEEEEEEEEECccccccccCECcccccCEEEEEEEECccccCCcc
***KGFIFGFVLFFLINLTTAQRTPTISYISQEQIKDIGGTVELKCSVQYAQDYPVIWMKVDRNKVTEPLPISTGSSLIIRDSRFAIRYDTASSTYTLLVKDIQETDAGYYRCQVIIGINNKISAEVDLQVRRPPVISDNSTRSLVVSEGQPVQLECFAGGHPTPRISWRRENNAILPTGGSIYRGSILKIPQITKEDRGTYYCVAENGVGKGTRRNIAVEVEFAPVITVPKPRLGQALQYDMDLECHVEAYPPPAIVWIKEDTQQVLTNNQHYSISHFATADEFTDTTIRVITIEKRQYGSYICRAANKLGTSEKTVELFESIIPVCPPQTQPSELLPLRNVNMAVIFAEQPTSWEPQRKQLNCSSLLYQCVLPLVD*QD*****
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SSSSSSSSSSSSSSSSSSSSSxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
MESKGFIFGFVLFFLINLTTAQRTPTISYISQEQIKDIGGTVELKCSVQYAQDYPVIWMKVDRNKVTEPLPISTGSSLIIRDSRFAIRYDTASSTYTLLVKDIQETDAGYYRCQVIIGINNKISAEVDLQVRRPPVISDNSTRSLVVSEGQPVQLECFAGGHPTPRISWRRENNAILPTGGSIYRGSILKIPQITKEDRGTYYCVAENGVGKGTRRNIAVEVEFAPVITVPKPRLGQALQYDMDLECHVEAYPPPAIVWIKEDTQQVLTNNQHYSISHFATADEFTDTTIRVITIEKRQYGSYICRAANKLGTSEKTVELFESIIPVCPPQTQPSELLPLRNVNMAVIFAEQPTSWEPQRKQLNCSSLLYQCVLPLVDRQDRLMHP

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
Lachesin Required for normal tracheal development and maintenance of the trans-epithelial diffusion barrier. Functions as a homophilic cell-adhesion molecule. May play a role in early neuronal differentiation and axon outgrowth.very confidentQ24372
Lachesin May play a role in early neuronal differentiation and axon outgrowth.confidentQ26474
Neuronal growth regulator 1 May be involved in cell-adhesion. May participate in the regulation of neurite outgrowth in the developing brain.confidentQ9W6V2

Prediction of Gene Ontology Terms ?

GO Term ?Description ?Confidence Level ?Parent GO Terms ?
GO:0005918 [CC]septate junctionconfidentGO:0005575, GO:0070160, GO:0043296, GO:0030054, GO:0005911
GO:0042803 [MF]protein homodimerization activityconfidentGO:0046983, GO:0003674, GO:0005515, GO:0042802, GO:0005488
GO:0005886 [CC]plasma membraneconfidentGO:0005575, GO:0044464, GO:0016020, GO:0071944, GO:0005623
GO:0007156 [BP]homophilic cell adhesionconfidentGO:0016337, GO:0009987, GO:0044763, GO:0007155, GO:0008150, GO:0022610, GO:0044699
GO:0019991 [BP]septate junction assemblyprobableGO:0022607, GO:0034330, GO:0016043, GO:0034329, GO:0008150, GO:0044085, GO:0007043, GO:0071840, GO:0045216, GO:0044763, GO:0009987, GO:0043297, GO:0044699
GO:0035160 [BP]maintenance of epithelial integrity, open tracheal systemprobableGO:0060541, GO:0007424, GO:0035152, GO:0032501, GO:0044707, GO:0048871, GO:0060249, GO:0044699, GO:0048856, GO:0042592, GO:0065007, GO:0008150, GO:0048731, GO:0001894, GO:0065008, GO:0032502, GO:0007275, GO:0010669
GO:0016331 [BP]morphogenesis of embryonic epitheliumprobableGO:0048598, GO:0002009, GO:0048856, GO:0044707, GO:0060429, GO:0009888, GO:0044767, GO:0009790, GO:0032501, GO:0008150, GO:0048729, GO:0009653, GO:0032502, GO:0007275, GO:0044699
GO:0035151 [BP]regulation of tube size, open tracheal systemprobableGO:0035150, GO:0007424, GO:0035152, GO:0032501, GO:0044707, GO:0060541, GO:0048856, GO:0090066, GO:0008150, GO:0065007, GO:0048731, GO:0065008, GO:0032502, GO:0007275, GO:0044699
GO:0044421 [CC]extracellular region partprobableGO:0005575, GO:0005576
GO:0007409 [BP]axonogenesisprobableGO:0032502, GO:0044707, GO:0030030, GO:0030154, GO:0048468, GO:0031175, GO:0009653, GO:0007275, GO:0044699, GO:0000904, GO:0000902, GO:0048869, GO:0016043, GO:0032989, GO:0071840, GO:0048666, GO:0048667, GO:0032501, GO:0030182, GO:0009987, GO:0044767, GO:0044763, GO:0048731, GO:0022008, GO:0032990, GO:0048699, GO:0048858, GO:0007399, GO:0048856, GO:0048812, GO:0008150
GO:0048522 [BP]positive regulation of cellular processprobableGO:0048518, GO:0008150, GO:0065007, GO:0050789, GO:0050794
GO:0050896 [BP]response to stimulusprobableGO:0008150
GO:0019898 [CC]extrinsic to membraneprobableGO:0005575, GO:0044425, GO:0016020
GO:0044444 [CC]cytoplasmic partprobableGO:0005737, GO:0044464, GO:0005623, GO:0005622, GO:0005575, GO:0044424
GO:0009986 [CC]cell surfaceprobableGO:0005575, GO:0044464, GO:0005623
GO:0030424 [CC]axonprobableGO:0044464, GO:0005623, GO:0005575, GO:0097458, GO:0043005, GO:0042995
GO:0044459 [CC]plasma membrane partprobableGO:0016020, GO:0044464, GO:0005623, GO:0005575, GO:0071944, GO:0005886, GO:0044425

Prediction of Enzyme Commission Number ?

No EC number assigned to the protein, probably not an enzyme!


Spatial Structural Prediction

Structural Models Based on Templates

Template: 1E07, chain A
Confidence level:very confident
Coverage over the Query: 27-269,286-385
View the alignment between query and template
View the model in PyMOL
Template: 3V2A, chain R
Confidence level:very confident
Coverage over the Query: 24-136
View the alignment between query and template
View the model in PyMOL
Template: 2GKI, chain A
Confidence level:confident
Coverage over the Query: 24-225
View the alignment between query and template
View the model in PyMOL