Diaphorina citri psyllid: psy8916


Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520
MSTGQKETLQQPNLGLTQVGWIFTDLVAEDLQLGTVRHTRNIDSHFLSAHECIMAGHLQNLHPNPCRFAPSGYFGSKFVTICVTVNECIMAGHLQNLHPNPCRFAPSGYFGSKFVTICVTGDKDNQVHMEGYQVSNQCMALVRDGCLIPTKDAPELGYIKESSDKQYVPDVFYKILRIQSPVGIVKRININRSDTCKDLFEKINKEFELNTYNFALFKQRNKTDEIFSSRDQTIASVGLSNGDFVYMMNLSSPNDEKPSTSSNHLNIYETKKKASTTPSTPTEFKSKLSNAFSSSNNIVEDEVDKELWKTDGQVKRKRDDKFCRHGANALCIHCSPLEPYDEEYLREQNVKHMSFHAYLRKQCAGVDRGKFVVLEDLSCRIKEGCREHPPWPRGICSKCQPNAITLNRQVYRHVDNVEFENRTLVERFLEYWRVTGHQRLGLLYGKYQLHPDVPLGIKAVVAAIYEPPQESSRDKIKLLPDPKAEVVEEIASSLGLTQVGWIFTDLVAEDLQLGTYFQSR
ccccHHHHHcccccccCEEEEEEEccccccccccEEEEEcccccEEEcHHHHHHHHcccccccccccccccccccccEEEEEEccHHHHHHHHHHHHccccccccccccccccEEEEEEEccccccEEEEEEEHHHHHHHHHHcccccccccccccEEEcccccccccccHHHHHHHHccccccEEEEEccccccHHHHHHHHHHHcccccccEEEEEcccccccccccccccccccccccccEEEEEEcccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHcccccccccccccccccccccccccccccccccccHHHHHHcccccccHHHHHHHHHcccccccccccccccEEEccccccccccccccccccccccEEccccccccccEEEEccHHHHHHHHHHHHHHccCEEEEEEEEEECccccccccEEEEEEEEccccccccccEEEcccccHHHHHHHHHHcccEEEEEEEEccccccccccEEEEEc
**********QPNLGLTQVGWIFTDLVAEDLQLGTVRHTRNIDSHFLSAHECIMAGHLQNLHPNPCRFAPSGYFGSKFVTICVTVNECIMAGHLQNLHPNPCRFAPSGYFGSKFVTICVTGDKDNQVHMEGYQVSNQCMALVRDGCLIPTKDAPELGYIKESSDKQYVPDVFYKILRIQSPVGIVKRININRSDTCKDLFEKINKEFELNTYNFALFKQRNKTDEIFSSRDQTIASVGLSNGDFVYMM***********************************************************W**********DDKFCRHGANALCIHCSPLEPYDEEYLREQNVKHMSFHAYLRKQCAGVDRGKFVVLEDLSCRIKEGCREHPPWPRGICSKCQPNAITLNRQVYRHVDNVEFENRTLVERFLEYWRVTGHQRLGLLYGKYQLHPDVPLGIKAVVAAIYEPPQESSRDKIKLLPDPKAEVVEEIASSLGLTQVGWIFTDLVAEDLQLGTYFQSR
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MSTGQKETLQQPNLGLTQVGWIFTDLVAEDLQLGTVRHTRNIDSHFLSAHECIMAGHLQNLHPNPCRFAPSGYFGSKFVTICVTVNECIMAGHLQNLHPNPCRFAPSGYFGSKFVTICVTGDKDNQVHMEGYQVSNQCMALVRDGCLIPTKDAPELGYIKESSDKQYVPDVFYKILRIQSPVGIVKRININRSDTCKDLFEKINKEFELNTYNFALFKQRNKTDEIFSSRDQTIASVGLSNGDFVYMMNLSSPNDEKPSTSSNHLNIYETKKKASTTPSTPTEFKSKLSNAFSSSNNIVEDEVDKELWKTDGQVKRKRDDKFCRHGANALCIHCSPLEPYDEEYLREQNVKHMSFHAYLRKQCAGVDRGKFVVLEDLSCRIKEGCREHPPWPRGICSKCQPNAITLNRQVYRHVDNVEFENRTLVERFLEYWRVTGHQRLGLLYGKYQLHPDVPLGIKAVVAAIYEPPQESSRDKIKLLPDPKAEVVEEIASSLGLTQVGWIFTDLVAEDLQLGTYFQSR

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
Nuclear protein localization protein 4 homolog May be part of a complex that binds ubiquitinated proteins and that is necessary for the export of misfolded proteins from the ER to the cytoplasm, where they are degraded by the proteasome.confidentQ9VBP9

Prediction of Gene Ontology Terms ?

GO Term ?Description ?Confidence Level ?Parent GO Terms ?
GO:0031625 [MF]ubiquitin protein ligase bindingprobableGO:0003674, GO:0044389, GO:0005515, GO:0019899, GO:0005488
GO:0005829 [CC]cytosolprobableGO:0005737, GO:0044464, GO:0005623, GO:0005622, GO:0005575, GO:0044444, GO:0044424
GO:0043130 [MF]ubiquitin bindingprobableGO:0003674, GO:0032182, GO:0005488, GO:0005515
GO:0034098 [CC]Cdc48p-Npl4p-Ufd1p AAA ATPase complexprobableGO:0005783, GO:0005789, GO:0042175, GO:0043229, GO:0043227, GO:0043226, GO:0005737, GO:0044446, GO:0031090, GO:0016020, GO:0044432, GO:0012505, GO:0043234, GO:0032991, GO:0043231, GO:0044464, GO:0005623, GO:0005622, GO:0005575, GO:0044444, GO:0044424, GO:0044425, GO:0044422
GO:0006944 [BP]cellular membrane fusionprobableGO:0016044, GO:0009987, GO:0016043, GO:0061025, GO:0061024, GO:0044763, GO:0071840, GO:0008150, GO:0044699
GO:0005634 [CC]nucleusprobableGO:0043231, GO:0044464, GO:0005623, GO:0005622, GO:0005575, GO:0043229, GO:0044424, GO:0043227, GO:0043226
GO:0007030 [BP]Golgi organizationprobableGO:0006996, GO:0009987, GO:0016043, GO:0044763, GO:0044699, GO:0008150, GO:0071840

Prediction of Enzyme Commission Number ?

No EC number assigned to the protein, probably not an enzyme!


Spatial Structural Prediction

Structural Models Based on Templates

Template: 2PJH, chain A
Confidence level:very confident
Coverage over the Query: 174-247
View the alignment between query and template
View the model in PyMOL
Template: 3VDZ, chain A
Confidence level:probable
Coverage over the Query: 156-249
View the alignment between query and template
View the model in PyMOL
Template: 3SBG, chain A
Confidence level:probable
Coverage over the Query: 415-507
View the alignment between query and template
View the model in PyMOL
Template: 2ZNR, chain A
Confidence level:probable
Coverage over the Query: 13-29,45-63,113-154
View the alignment between query and template
View the model in PyMOL