Diaphorina citri psyllid: psy8949

Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490---
MSILILWVKEFLNDDNHGLDSLIEYLSFRLVMMRHEYRIADSKHLSEETLNTSSEKCDKPPYRWVKEFLNDDNHGLDSLIEYLSFRLVMMRHEYRIADSKHLSEETLNTSSETENGLPASTNPPANVISPQSLGHQRPSLDLASSPSVKKRSRHAARLNMGDPKDDIHVCILCLRAIMNNKYGLNMVIKHTEAINSIALSLMHKSLRTKALVLELLAAICLVTGGHEIILAAFDNFKEICQESKRFETLMDYFMNYEVFHIEFMVACMQFINIVVHSVEDMNFRVHLQYEFSRLGLDSYLDKLRHTETLLLHCYLLCLYFYRVQVACMQFINIVVHSVEDMNFRVHLQYEFSRLGLDSYLDKLRHTESEELQVACMQFINIVVHSVEDMNFRVHLQYEFSRLGLDSYLDKLRHTESEELQERVQAKDPPAHYLSKLRTYLDPKASRSSRVQISAYLDNVFDVAALMEDSETKTAALEKVAELEDELGHRTFPP
cHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHccccccHHHcccccccccccccHHHHHHHcccccHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHcccccccccHHHHHHHHHHHHccHHHHHHHHccHHHHHHHHHHHccccHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHccccccHHHHHHHHHcccccHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHcccHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHccHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHcHHHHHHHHccccHHHHHHHHccccccccHHHHHHcccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccc
*SILILWVKEFLNDDNHGLDSLIEYLSFRLVMMRHEYRIAD*************EKCDKPPYRWVKEFLNDDNHGLDSLIEYLSFRLVMMRHEY***********************************************************************DIHVCILCLRAIMNNKYGLNMVIKHTEAINSIALSLMHKSLRTKALVLELLAAICLVTGGHEIILAAFDNFKEICQESKRFETLMDYFMNYEVFHIEFMVACMQFINIVVHSVEDMNFRVHLQYEFSRLGLDSYLDKLRHTETLLLHCYLLCLYFYRVQVACMQFINIVVHSVEDMNFRVHLQYEFSRLGLDSYLDKLRHTESEELQVACMQFINIVVHSVEDMNFRVHLQYEFSRLGLDSYLDKLRHTESEELQE**Q*************************VQISAYLDNVFDVAALM***************************
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MSILILWVKEFLNDDNHGLDSLIEYLSFRLVMMRHEYRIADSKHLSEETLNTSSEKCDKPPYRWVKEFLNDDNHGLDSLIEYLSFRLVMMRHEYRIADSKHLSEETLNTSSETENGLPASTNPPANVISPQSLGHQRPSLDLASSPSVKKRSRHAARLNMGDPKDDIHVCILCLRAIMNNKYGLNMVIKHTEAINSIALSLMHKSLRTKALVLELLAAICLVTGGHEIILAAFDNFKEICQESKRFETLMDYFMNYEVFHIEFMVACMQFINIVVHSVEDMNFRVHLQYEFSRLGLDSYLDKLRHTETLLLHCYLLCLYFYRVQVACMQFINIVVHSVEDMNFRVHLQYEFSRLGLDSYLDKLRHTESEELQVACMQFINIVVHSVEDMNFRVHLQYEFSRLGLDSYLDKLRHTESEELQERVQAKDPPAHYLSKLRTYLDPKASRSSRVQISAYLDNVFDVAAxxxxxxxxxxxxxxxxxxxxxLGHRTFPP

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
Formin-like protein CG32138 confidentQ9VUC6

Prediction of Gene Ontology Terms ?

GO Term ?Description ?Confidence Level ?Parent GO Terms ?
GO:0008360 [BP]regulation of cell shapeprobableGO:0022604, GO:0022603, GO:0050793, GO:0051128, GO:0065007, GO:0008150, GO:0065008, GO:0050789, GO:0050794
GO:0032794 [MF]GTPase activating protein bindingprobableGO:0003674, GO:0005488, GO:0005515
GO:0048365 [MF]Rac GTPase bindingprobableGO:0019899, GO:0017016, GO:0031267, GO:0051020, GO:0003674, GO:0017048, GO:0005515, GO:0005488
GO:0051015 [MF]actin filament bindingprobableGO:0003779, GO:0003674, GO:0005488, GO:0005515, GO:0008092
GO:0051014 [BP]actin filament severingprobableGO:0008150, GO:0009987, GO:0044763, GO:0044699, GO:0030029
GO:0005829 [CC]cytosolprobableGO:0005737, GO:0044464, GO:0005623, GO:0005622, GO:0005575, GO:0044444, GO:0044424
GO:0005522 [MF]profilin bindingprobableGO:0003674, GO:0005488, GO:0005515
GO:0016477 [BP]cell migrationprobableGO:0040011, GO:0048870, GO:0009987, GO:0006928, GO:0051674, GO:0044763, GO:0008150, GO:0051179, GO:0044699
GO:0045335 [CC]phagocytic vesicleprobableGO:0005737, GO:0005575, GO:0043231, GO:0016023, GO:0031410, GO:0044464, GO:0044444, GO:0005623, GO:0031988, GO:0030139, GO:0043229, GO:0044424, GO:0005622, GO:0043227, GO:0043226, GO:0031982
GO:0030866 [BP]cortical actin cytoskeleton organizationprobableGO:0006996, GO:0007010, GO:0030029, GO:0071840, GO:0009987, GO:0030865, GO:0044763, GO:0030036, GO:0008150, GO:0044699, GO:0016043
GO:0005886 [CC]plasma membraneprobableGO:0005575, GO:0044464, GO:0016020, GO:0071944, GO:0005623

Prediction of Enzyme Commission Number ?

No EC number assigned to the protein, probably not an enzyme!

Spatial Structural Prediction

Structural Models Based on Templates

Template: 2BNX, chain A
Confidence level:very confident
Coverage over the Query: 47-88,99-101,123-126,140,161-330,356-362,383-389,416-466
View the alignment between query and template
View the model in PyMOL
Template: 3EG5, chain B
Confidence level:very confident
Coverage over the Query: 326-427
View the alignment between query and template
View the model in PyMOL