Psyllid ID: psy9184

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560--
Protein Sequence
MINPEPLDDSGDKTSRYIALDDTVIEDNGNKTALNKCESNEEDEMYYSQTEDSVIEAHKKSVRFLDETLKKEKTDNKAEKNNNSVGTVKSVGIHRDLKDAEEGQGDAVAQFNRLRNVTVRRGRKFIAEDADTTLQPNKVSLASGRFTMEDVDTTLHRTKVSLAPGKMWKRSLINNSIREQHKVSHKFCRSFVSYSEEFSSAVSFKSRRSSSLSSTGDEDTLYETVLSSSLQYDDNEFCRKKILDICQQEDVVSFEDRYPSSALKNCKKIGEGVYGEVFKLNNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTELLKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIKYRSPNQTYAMILQVVFSLAVAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVGEKICYYDLSQDEELFEGEGDYQFDMYRMMRKQCQNNWQNFTPKNNVFWIHYLVDKATCLKKGYQYLRAPRHQAFELLEELGQNALHFDSCYEM
Secondary Structure (PSIPRED)
ccccccccccccccccEEEccccHHccccccccccccccccccHHHHHccccHHHHHHccccHHHHHHHcccccccccccccccccccccccEEcccccccccccccccccccccccEEccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHccccccccccccccccccccccccccccccccccccccEEEEEEccccccccccccccHHHHHHHHHHHHHHHcccccccccccccEEEEEEEEEcccccHHHHHHHHHHHHHcccccccccccccccEEEEEEEccccccccccccccHHHHHHHHHHHHHHHHHHHHHcccEEcccccccEEEEcccccccccccccccEEEEEccEEEEEEEcccccccccccEEEEcccccccccccccccHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHcccccccccccc
Secondary Structure Prediction (SSPRO)
cccccccccccccccEEEEEcccEEEcccccEEEEccccccccEEEEEEcccEEEEEccccccccccHHEEccccccEEEcccccccccccccccccccHHHccccEEEEccccccccccccccccccccHccccccccccccccccccccccccccccEEcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHcccccccHHHHcccccHccEEEEEcccccEEEEcccEEEEEEEccccccccccccccHHHHHHHHHHHHHHHHHHcccccccccEEEEEEEEEEEccccHHHHHHHHHHHHHcccccccccccccccEEEEEEEccccccHHHcccccHHHHHHHHHHHHHHHHHHHHHHcHcHcccccccEEEEccccccEEEEEcccEEEEccccEEEEEEEcEccEcccccEEEEEcccccHHHHcccccHHHHHHHHHHHHHcccHHHcccHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHccccccccc
Coil and Loop (DISEMBL)
minpeplddsgdktsryialddtviedngnktalnkcesneedemyysqtEDSVIEAHKKSVRFLDETLKKEktdnkaeknnnsvgtvksvgihrdlkdaeegqgDAVAQFNRLRNVTVRRGRKFiaedadttlqpnkvslasgrftmedvdtTLHRTkvslapgkmwkrsLINNSIREQHKVSHKFCRSFVSYSEEFssavsfksrrssslsstgdedtLYETVLSsslqyddneFCRKKILDIcqqedvvsfedrypssalknckkigegvyGEVFKLNNSVikimpiegdqsvngeEQKKFREIFSEIMVTKEtsdlqyrtenstpcftellkcscvrgrypdRLVTLWEEFAKTkksyndhpsmfeeDQIFIILELknggndsgdikyrspnqTYAMILQVVFSLAVAEVELEFEHRDLHMSNILVlqtdqdessftlddtHYAMKTAGVQVTIIDFTIsrcfvgekicyydlsqdeelfegegdyQFDMYRMMRKQCQNnwqnftpknnVFWIHYLVDKATCLKKGYQYLRAPRHQAFELLEELGqnalhfdscyem
Flexible Loop (DISEMBL)
minpeplddsgdktsrYIALddtviedngnktalnkcesneeDEMYYSQTEDSVIEAHKKSVRFLDETlkkektdnkaeknnnsvgtvksvGIHRDLKDaeegqgdavaqfnrlrnvtvrRGRKfiaedadttlqpnkvslasgrftmedvdttlhrtkvslapgkmwkrsLINNSIREQHKVSHKFCRSFVSYSEEFssavsfksrrssslsstgdedtlyETVLSSSLQYDDNEFCRKKILDICQQEDVVSfedrypssalknckkigegVYGEVFKLNNSVIKIMpiegdqsvngeEQKKFREIFSEIMVtketsdlqyrtenSTPCFTELLKCSCVRGRYPDRLVTLWEEFAKTkksyndhpsmFEEDQIFIILELKNGGNDSGDIKYRSPNQTYAMILQVVFSLAVAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVGEKICYYDLSQDEELFEGEGDYQFDMYRMMRKQCQNNWQNFTPKNNVFWIHYLVDKATCLKKGYQYLRAPRHQAFELLEELGQNALHFDSCYEM
Low Complexity Region (SEG)
MINPEPLDDSGDKTSRYIALDDTVIEDNGNKTALNKCESNEEDEMYYSQTEDSVIEAHKKSVRFLDETLKKEKTDNKAEKNNNSVGTVKSVGIHRDLKDAEEGQGDAVAQFNRLRNVTVRRGRKFIAEDADTTLQPNKVSLASGRFTMEDVDTTLHRTKVSLAPGKMWKRSLINNSIREQHKVSHKFCRSFVSYSEEFssavsfksrrssslssTGDEDTLYETVLSSSLQYDDNEFCRKKILDICQQEDVVSFEDRYPSSALKNCKKIGEGVYGEVFKLNNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTELLKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIKYRSPNQTYAMILQVVFSLAVAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVGEKICYYDLSQDEELFEGEGDYQFDMYRMMRKQCQNNWQNFTPKNNVFWIHYLVDKATCLKKGYQYLRAPRHQAFELLEELGQNALHFDSCYEM
Disordered region (IsUnstruct)
*****************IAL***************************************************************************************VAQFNRLRNVTVRRGRKFIAED**************GRFTMEDVDTTLHRTKVSLAPGKMWKRSLINNSIREQHKVSHKFCRSFVSY**************************LYETVLSSSLQYDDNEFCRKKILDICQQEDVVSFEDRYPSSALKNCKKIGEGVYGEVFKLNNSVIKIMPIEG***********FREIFSEIMVTKETSDLQYRTENSTPCFTELLKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIKYRSPNQTYAMILQVVFSLAVAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVGEKICYYDLSQDEELFEGEGDYQFDMYRMMRKQCQNNWQNFTPKNNVFWIHYLVDKATCLKKGYQYLRAPRHQAFELLEELGQNALHFDSC***
Disordered Region (DISOPRED)
********************************************************************************************************************************************************************************************************************************************FCRKKILDICQQEDVVSFEDRYPSSALKNCKKIGEGVYGEVFKLNNSVIKIMPIEGDQ*********FREIFSEIMVTKETSDLQYRTENSTPCFTELLKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIKYRSPNQTYAMILQVVFSLAVAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVGEKICYYDLSQDEELFEGEGDYQFDMYRMMRKQCQNNWQNFTPKNNVFWIHYLVDKATC******************LEELGQNALHFDSCYEM
Disordered Region (DISEMBL)
************KTSRYIALDDTVIEDNGNKTALNKCESNEEDEMYYSQTEDSVIEAHKKSVRFLDETLKKEKTDNKAEKNNNSVGTVKSVGIHRDLKDAEEGQGDAVAQFNRLRNVTVRRGRKFIAEDADTTLQPNKVSLASGRFTMEDVDTTLHRTKVSLAPGKMWKRSLINNSIREQHKVSHKFCRSFVSYS***********************DTLYETVLSSSLQYDDNEFCRKKILDICQQEDVVSFEDRYPSSALKNCKKIGEGVYGEVFKLNNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTELLKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIKYRSPNQTYAMILQVVFSLAVAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVGEKICYYDLSQDEELFEGEGDYQFDMYRMMRKQCQNNWQNFTPKNNVFWIHYLVDKATCLKKGYQYLRAPRHQAFELLEELGQNALHFDSCYEM
Disordered Region (DISPRO)
*****PLDDSGDKTSRYIALDDTVIEDNGNKTALNKCESNEEDEMYYSQTEDSVIEAHKKSVRFLDETLKKEKTDNKAEKN***VGTVKS*G**RDLKDAEEGQGDAVAQFN****************************************************************************************************************VLSSSLQYDDNEFCRKKILDICQQEDVVSFEDRYPSSALKNCKKIGEGVYGEVFKLNNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTELLKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIKYRSPNQTYAMILQVVFSLAVAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVGEKICYYDLSQDEELFEGEGDYQFDMYRMMRKQCQNNWQNFTPKNNVFWIHYLVDKATCLKKGYQYLRAPRHQAFELLEELGQNALHFDS****
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
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TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MINPEPLDDSGDKTSRYIALDDTVIEDNGNKTALNKCESNEEDEMYYSQTEDSVIEAHKKSVRFLDETLKKEKTDNKAEKNNNSVGTVKSVGIHRDLKDAEEGQGDAVAQFNRLRNVTVRRGRKFIAEDADTTLQPNKVSLASGRFTMEDVDTTLHRTKVSLAPGKMWKRSLINNSIREQHKVSHKFCRSFVSYSEEFSSAVSFKSRRSSSLSSTGDEDTLYETVLSSSLQYDDNEFCRKKILDICQQEDVVSFEDRYPSSALKNCKKIGEGVYGEVFKLNNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTELLKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIKYRSPNQTYAMILQVVFSLAVAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVGEKICYYDLSQDEELFEGEGDYQFDMYRMMRKQCQNNWQNFTPKNNVFWIHYLVDKATCLKKGYQYLRAPRHQAFELLEELGQNALHFDSCYEM
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	562	2.2.26 [Sep-21-2011]
P83103	566	Putative serine/threonine	yes	N/A	0.672	0.667	0.374	1e-71
Q9Z0R0	754	Serine/threonine-protein	yes	N/A	0.505	0.376	0.444	2e-66
Q2KIP2	781	Serine/threonine-protein	yes	N/A	0.590	0.425	0.404	2e-63
Q8TF76	798	Serine/threonine-protein	yes	N/A	0.505	0.355	0.427	3e-62
O13924	488	Serine/threonine-protein	yes	N/A	0.519	0.598	0.283	6e-36
P32789	676	Serine/threonine-protein	yes	N/A	0.188	0.156	0.248	1e-05
P43633	760	Serine/threonine-protein	no	N/A	0.218	0.161	0.251	0.0002

>sp|P83103|HASP_DROME Putative serine/threonine-protein kinase haspin homolog OS=Drosophila melanogaster GN=Haspin PE=2 SV=1

 Score =  271 bits (692), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 157/419 (37%), Positives = 239/419 (57%), Gaps = 41/419 (9%)

Query: 153 TTLHRTKVSLAPGKMWKRSLINNSIREQHKVSHKFCRSFVSYSEEFSSAVSFKSRRSSSL 212
           T +H + +SL PGK W++SL NN IR   K++     +F    E  SS    + R+S  L
Sbjct: 164 TAVHPS-ISLNPGK-WRKSL-NNFIRS--KITET---NFTKKVERRSSIC--QDRKSLVL 213

Query: 213 SSTGDEDTLYETVLSSSLQYDDNEFCRKKILDICQQEDVVSFEDRYPSSALKNCKKIGEG 272
                 +  YE                + +L  C Q   + F   Y    L N KKIGEG
Sbjct: 214 KGEHKFENKYE----------------EDVLKYCHQCTPLPFNTAYEQHKLLNTKKIGEG 257

Query: 273 VYGEVFK-----------LNNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQ 321
            YGEVF+           +++ V+KI+P+EG   +NGE+QK F +I  EI++TK+   L+
Sbjct: 258 AYGEVFRCSRNQEVLKDHISDIVLKIIPLEGSTVINGEKQKTFSQILPEIIITKKMCSLR 317

Query: 322 YRTENSTPCFTELLKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELK 381
               NST  F  + K S V+GRYP   + LWE++   K S NDHP +F ++Q+F +LELK
Sbjct: 318 TSKTNSTNGFVSIQKVSLVKGRYPPHFIKLWEKYDNEKGSENDHPELFGDNQLFAVLELK 377

Query: 382 NGGNDSGDIKYRSPNQTYAMILQVVFSLAVAEVELEFEHRDLHMSNILVLQTDQDESSFT 441
             G+D  + K+ +  Q+Y  + Q++ +LAV E E +FEHRDLH+ NIL+  T++     T
Sbjct: 378 FAGSDMANFKFLNSEQSYYALQQIILALAVGEEEYQFEHRDLHLGNILIEYTNKKHIVCT 437

Query: 442 LDDTHYAMKTAGVQVTIIDFTISRCFVGEKICYY-DLSQDEELFEGEGDYQFDMYRMMRK 500
              ++  + + GV VTIID+T+SR  + +  CY+ DLS+DEELF+  GDYQ+D+YRMMR 
Sbjct: 438 FKSSNLTLLSKGVNVTIIDYTLSRVTIND-CCYFNDLSRDEELFQATGDYQYDVYRMMRN 496

Query: 501 QCQNNWQNFTPKNNVFWIHYLVDKATCLKKGYQYLRAPRHQAF-ELLEELGQNALHFDS 558
           + +NNW +F+PK N+ W+ Y++ K     K Y+ +    H+ + + ++EL    + F+S
Sbjct: 497 ELKNNWSSFSPKTNIIWLSYVIVKVLDSVK-YKSINTKVHRMYIDKIKELKNIIMTFES 554

Drosophila melanogaster (taxid: 7227)
EC: 2EC: .EC: 7EC: .EC: 1EC: 1EC: .EC: 1

>sp|Q9Z0R0|HASP_MOUSE Serine/threonine-protein kinase haspin OS=Mus musculus GN=Gsg2 PE=1 SV=3

 Score =  253 bits (647), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 129/290 (44%), Positives = 178/290 (61%), Gaps = 6/290 (2%)

Query: 241 KILDICQQEDVVSFEDRYPSSALKNCKKIGEGVYGEVFKLNNS----VIKIMPIEGDQSV 296
           K+   C QE  + F D   +  L+ C+KIGEGV+GEVF++ N      +KI+ IEG   V
Sbjct: 418 KVYGECNQEGPIPFSDCLSTEKLERCEKIGEGVFGEVFQIINDQAPVALKIIAIEGLDLV 477

Query: 297 NGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTELLKCSCVRGRYPDRLVTLWEEFA 356
           NG  QK F EI  EI+++KE S L     N T  F  L    CV+G YP  L+  W+ + 
Sbjct: 478 NGSHQKTFEEILPEIIISKELSLLSSEAYNRTEGFIGLNSVHCVQGLYPPLLLKAWDHYN 537

Query: 357 KTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIKYR--SPNQTYAMILQVVFSLAVAEV 414
            TK+S ND P  F+EDQ+FIILE + GG D   +K +  S     +++ Q+  SLAVAE 
Sbjct: 538 TTKRSANDRPDFFQEDQLFIILEFEFGGVDLERMKTKLSSVATAKSILHQITASLAVAEA 597

Query: 415 ELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVGEKICY 474
            L FEHRDLH  N+L+ +T+  E  +TL+     + T G+QV IID+T+SR      + +
Sbjct: 598 SLHFEHRDLHWGNVLLKKTNLKELRYTLNGKTSTIPTHGLQVNIIDYTLSRLERDGIVVF 657

Query: 475 YDLSQDEELFEGEGDYQFDMYRMMRKQCQNNWQNFTPKNNVFWIHYLVDK 524
            D+S +E+LF GEGDYQF++YR+MRK+ +N W  + P NNV W+HYL DK
Sbjct: 658 CDISAEEDLFTGEGDYQFEIYRLMRKENKNCWGEYHPYNNVLWLHYLTDK 707

Serine/threonine-protein kinase that phosphorylates histone H3 at 'Ser-3' (H3T3ph) during mitosis. This positions and activates AURKB and other components of the chromosomal passenger complex (CPC) at centromeres to ensure proper chromatid cohesion, metaphase alignment and normal progression through the cell cycle.

Mus musculus (taxid: 10090)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q2KIP2|HASP_BOVIN Serine/threonine-protein kinase haspin OS=Bos taurus GN=GSG2 PE=2 SV=1

 Score =  244 bits (622), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 138/341 (40%), Positives = 189/341 (55%), Gaps = 9/341 (2%)

Query: 193 SYSEEFSSAVS---FKSRRSSSLSSTGDEDTLYETVLSSSLQYDDNEFCRKKILDICQQE 249
           S SE   S  S    ++R S +LS          T L +    D      +K+   C Q 
Sbjct: 394 SLSESLMSEYSHHPVQNRTSCALSPWHSSSMYLLTPLKTQQVTDKRTSDAEKLYGECNQV 453

Query: 250 DVVSFEDRYPSSALKNCKKIGEGVYGEVFKLNNS----VIKIMPIEGDQSVNGEEQKKFR 305
             + F D      L+ C+KIGEGV+GEVF+   +     +KI+ IEG   VNG  QK F 
Sbjct: 454 GPIPFSDYLSEEKLECCEKIGEGVFGEVFQTVTNHTPVALKIIAIEGQNLVNGAHQKTFE 513

Query: 306 EIFSEIMVTKETSDLQYRTENSTPCFTELLKCSCVRGRYPDRLVTLWEEFAKTKKSYNDH 365
           EI  EI+++KE S L     N T  F  L    CV+G YP  L+  W+ +  TK S ND 
Sbjct: 514 EILPEIIISKELSLLSDEACNRTEGFIGLNSVHCVQGSYPPLLLQAWDHYHSTKGSANDR 573

Query: 366 PSMFEEDQIFIILELKNGGNDSGDI--KYRSPNQTYAMILQVVFSLAVAEVELEFEHRDL 423
           P  F EDQ+FI+LE + GG D   +  K  S     +++ Q+  SLAVAE  L FEHRDL
Sbjct: 574 PDFFREDQLFIVLEFEFGGIDLEQMRKKLSSIATAKSILHQITASLAVAEASLHFEHRDL 633

Query: 424 HMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVGEKICYYDLSQDEEL 483
           H  N+L+ +T   E  +TL+    ++ T G+QV IID+T+SR      + + D+S+DE+L
Sbjct: 634 HWGNVLLKKTSLKELHYTLNGKKSSIPTRGLQVNIIDYTLSRLERDGIVVFCDISRDEDL 693

Query: 484 FEGEGDYQFDMYRMMRKQCQNNWQNFTPKNNVFWIHYLVDK 524
           F G+GDYQF++YR+MRK+  N W  + P NNV W+HYL DK
Sbjct: 694 FMGQGDYQFEIYRLMRKENNNCWGEYHPYNNVLWLHYLTDK 734

Serine/threonine-protein kinase that phosphorylates histone H3 at 'Ser-3' (H3T3ph) during mitosis. This positions and activates AURKB and other components of the chromosomal passenger complex (CPC) at centromeres to ensure proper chromatid cohesion, metaphase alignment and normal progression through the cell cycle.

Bos taurus (taxid: 9913)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q8TF76|HASP_HUMAN Serine/threonine-protein kinase haspin OS=Homo sapiens GN=GSG2 PE=1 SV=3

 Score =  239 bits (611), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 124/290 (42%), Positives = 173/290 (59%), Gaps = 6/290 (2%)

Query: 241 KILDICQQEDVVSFEDRYPSSALKNCKKIGEGVYGEVFKL----NNSVIKIMPIEGDQSV 296
           K+   C Q+  V F    P+  L+ C+KIGEGV+GEVF+         IKI+ IEG   V
Sbjct: 462 KVYGECSQKGPVPFSHCLPTEKLQRCEKIGEGVFGEVFQTIADHTPVAIKIIAIEGPDLV 521

Query: 297 NGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTELLKCSCVRGRYPDRLVTLWEEFA 356
           NG  QK F EI  EI+++KE S L     N T  F  L    CV+G YP  L+  W+ + 
Sbjct: 522 NGSHQKTFEEILPEIIISKELSLLSGEVCNRTEGFIGLNSVHCVQGSYPPLLLKAWDHYN 581

Query: 357 KTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDI--KYRSPNQTYAMILQVVFSLAVAEV 414
            TK S ND P  F++DQ+FI+LE + GG D   +  K  S     +++ Q+  SLAVAE 
Sbjct: 582 STKGSANDRPDFFKDDQLFIVLEFEFGGIDLEQMRTKLSSLATAKSILHQLTASLAVAEA 641

Query: 415 ELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVGEKICY 474
            L FEHRDLH  N+L+ +T   +  +TL+     + + G+QV+IID+T+SR      + +
Sbjct: 642 SLRFEHRDLHWGNVLLKKTSLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLERDGIVVF 701

Query: 475 YDLSQDEELFEGEGDYQFDMYRMMRKQCQNNWQNFTPKNNVFWIHYLVDK 524
            D+S DE+LF G+GDYQFD+YR+M+K+  N W  + P +NV W+HYL DK
Sbjct: 702 CDVSMDEDLFTGDGDYQFDIYRLMKKENNNRWGEYHPYSNVLWLHYLTDK 751

Serine/threonine-protein kinase that phosphorylates histone H3 at 'Ser-3' (H3T3ph) during mitosis. This positions and activates AURKB and other components of the chromosomal passenger complex (CPC) at centromeres to ensure proper chromatid cohesion, metaphase alignment and normal progression through the cell cycle.

Homo sapiens (taxid: 9606)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|O13924|HASP_SCHPO Serine/threonine-protein kinase haspin homolog hrk1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=hrk1 PE=1 SV=1

 Score =  152 bits (385), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 96/339 (28%), Positives = 167/339 (49%), Gaps = 47/339 (13%)

Query: 241 KILDICQQEDVVSFEDRYPSSALKNCKKIGEGVYGEVFKLNNS-----VIKIMPIEGDQS 295
           ++L I  QED + F  ++  S     +KIGE  Y EV++ +N+     V K++P      
Sbjct: 135 RLLQIVAQEDALPFS-QFVKSQTFEIQKIGEASYSEVYQASNADDVPVVWKVIPF----- 188

Query: 296 VNGEE-QKKFREIFSEIMVTKETSDLQYRTENSTPCFTELLKCSCVRGRYPDRLVTLWEE 354
             GE+ Q ++ ++ +E+ +++               F  L +   V+G YP  L+  W+ 
Sbjct: 189 --GEDGQAQYADVLNEVQISQWIK---------VDGFANLHQVVVVKGTYPSLLLEEWDR 237

Query: 355 FAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIKYRSPNQTYAMILQVVFSLAVAEV 414
           +     S ND P  +   Q++ +L L + G D    + RS  + +++  + +  L++ E 
Sbjct: 238 YLMQNGSENDRPDSYSSTQLYCVLCLDHSGTDLEHFELRSWRECWSVFYETLKILSLVET 297

Query: 415 ELEFEHRDLHMSNILVLQTD--QDESSFTLDDTHY----AMKTAG-----------VQVT 457
             EFEHRDLH  NIL+ + D  ++E SF L++       ++   G           +QVT
Sbjct: 298 RYEFEHRDLHWGNILIRKADRSEEEVSFLLNEISLDDIESVDFPGSQDKADDFDNILQVT 357

Query: 458 IIDFTISRCFVGEKICYYDLSQDEELFEGEGDYQFDMYRMMRKQCQNNWQNFTPKNNVFW 517
           +IDFT++R    + I  Y+   D +LF G  DYQFD+YR+M +  +  W  F P  NV W
Sbjct: 358 LIDFTLARASYSQGIISYNEFNDPDLFNGVDDYQFDIYRLMSRVTKGRWAQFFPITNVLW 417

Query: 518 IHYLVDK-------ATCLKKGYQYLRAPRHQAFELLEEL 549
           +HYL+ +       ++ L +    +R+   Q F L++ +
Sbjct: 418 LHYLIHQLLHKKNLSSPLTETETLMRSRLKQIFRLIDPV 456

Serine/threonine haspin-like protein kinase involved in cell cycle regulation.

Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|P32789|ALK2_YEAST Serine/threonine-protein kinase Haspin homolog ALK2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=ALK2 PE=1 SV=1

 Score = 52.0 bits (123), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 32/129 (24%), Positives = 54/129 (41%), Gaps = 23/129 (17%)

Query: 396 NQTYAMILQVVFSLAVAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQ 455
           +Q  ++  Q    L VAE + + EHR+L + +IL+                     +   
Sbjct: 505 SQALSIFWQCSSILYVAESKFQLEHRNLTLDHILI--------------------DSKGN 544

Query: 456 VTIIDFTISRCF-VGEKICYYDLSQDEELFEGEGDYQFDMYRMMRKQCQN--NWQNFTPK 512
           VT+ID    R   +      Y        F+G G  QF++Y +MR       +W  F P+
Sbjct: 545 VTLIDMKCCRFLNIDNNKASYTRLDHHYFFQGRGTLQFEIYELMRSMLPQPISWATFEPR 604

Query: 513 NNVFWIHYL 521
            N+ W+++L
Sbjct: 605 TNLLWLYHL 613

Serine/threonine haspin-like protein kinase involved in cell cycle regulation.

Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (taxid: 559292)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|P43633|ALK1_YEAST Serine/threonine-protein kinase Haspin homolog ALK1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=ALK1 PE=1 SV=2

 Score = 47.8 bits (112), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 41/163 (25%), Positives = 68/163 (41%), Gaps = 40/163 (24%)

Query: 374 IFIILELKNGGNDSGDIKYRSPNQTYAMILQVVFSLAVA----EVELEFEHRDLHMSNIL 429
           +++ L  K+ G     I  ++    +  IL++ +S A      E  L+FEHR+L + NIL
Sbjct: 561 LYLYLLFKDHGTPISLISLKN----WKQILKIFWSCAGIIHGLEKNLKFEHRNLTLDNIL 616

Query: 430 VLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVGEKICYYDLSQDEELF----- 484
           +                         +TIIDF  SR    +    Y L  D  LF     
Sbjct: 617 I--------------------DGNGNITIIDFKCSRLQTPQDDVLY-LRLDHPLFFLNGK 655

Query: 485 ------EGEGDYQFDMYRMMRKQCQNNWQNFTPKNNVFWIHYL 521
                 E +  ++F++Y+ MR     +   F P  N++W++YL
Sbjct: 656 DKSKINEYQYQFEFEIYQSMRILLNMDASAFEPMTNLYWLYYL 698

Serine/threonine haspin-like protein kinase involved in cell cycle regulation.

Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (taxid: 559292)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	562
91091654	833	PREDICTED: similar to Haspin CG40080-PA	0.615	0.415	0.434	7e-77
345495047	1555	PREDICTED: hypothetical protein LOC10012	0.569	0.205	0.432	9e-76
307190438	730	Serine/threonine-protein kinase haspin [	0.569	0.438	0.435	1e-72
270000886	1025	hypothetical protein TcasGA2_TC011145 [T	0.615	0.337	0.405	1e-71
326931446	433	PREDICTED: serine/threonine-protein kina	0.507	0.658	0.463	2e-71
443429434	407	haspin-like protein [Heliconius erato]	0.510	0.705	0.428	7e-71
332030036	2006	Putative serine/threonine-protein kinase	0.617	0.172	0.414	1e-70
443429433	1230	haspin-like protein [Heliconius erato]	0.510	0.233	0.428	1e-70
195164486	469	GL21152 [Drosophila persimilis] gi|19410	0.620	0.744	0.400	2e-70
350416482	1037	PREDICTED: hypothetical protein LOC10074	0.576	0.312	0.403	3e-70

>gi|91091654|ref|XP_971131.1| PREDICTED: similar to Haspin CG40080-PA [Tribolium castaneum]

 Score =  294 bits (753), Expect = 7e-77,   Method: Compositional matrix adjust.
 Identities = 158/364 (43%), Positives = 223/364 (61%), Gaps = 18/364 (4%)

Query: 206 SRRSSSLSSTGDEDTLYETVLSSSLQYDDNEFCRKKILDICQQEDVVSFEDRYPSSALKN 265
           S RS SL S G         LS +LQ       +  +L  C Q DV+ FE  YP SAL++
Sbjct: 476 SVRSLSLDSRGS--------LSPNLQIVT---AKDVVLRRCGQTDVLPFEQCYPQSALQH 524

Query: 266 CKKIGEGVYGEVFKLNN-----SVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDL 320
           C+KIGEGVYGEVF   N     SV+K++PIEGD  VNGE+QKKF EI SEI++  E S+L
Sbjct: 525 CQKIGEGVYGEVFLYRNPKGGTSVMKVIPIEGDLIVNGEKQKKFEEILSEIVIAMELSNL 584

Query: 321 QYRTENSTPCFTELLKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILEL 380
           +   +N+T  F+++    CV+G YP+RL+ LWE + +TK S ND P MF   Q +I+LEL
Sbjct: 585 RNNEKNTTTSFSQVQNVKCVQGVYPERLLDLWELYDETKGSENDSPQMFPPHQQYIVLEL 644

Query: 381 KNGGNDSGDIKYRSPNQTYAMILQVVFSLAVAEVELEFEHRDLHMSNILVLQTDQDES-S 439
            NGG+D     + +  Q YA+  Q+  +LAVAE +L+FEHRDLH  N+L+   ++ +   
Sbjct: 645 ANGGDDLESYVFNNAQQAYAVFQQIACALAVAEAQLKFEHRDLHWGNVLINTVNKSKVLP 704

Query: 440 FTLDDTHYAMKTAGVQVTIIDFTISRCFVGEKICYYDLSQDEELFEGEGDYQFDMYRMMR 499
           F L+     ++T GV+ TIIDFT+SR        +YDLS D+ELF  +GDYQF++YR+M+
Sbjct: 705 FRLNGKEILVETNGVEATIIDFTLSRVEFDGVAIFYDLSLDDELFHAKGDYQFEIYRLMQ 764

Query: 500 KQCQNNWQNFTPKNNVFWIHYLVDKATCLKKGYQYLRAPRHQAFEL-LEELGQNALHFDS 558
           K   N WQ+F P +N+ W+HY++DKA      Y+  ++  H  +   L+++    L F S
Sbjct: 765 KANGNMWQHFEPFSNILWLHYILDKAVTSAVRYKNPKSKIHLKYMAKLKKIKDEILAFRS 824

Query: 559 CYEM 562
             E 
Sbjct: 825 VAEF 828

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|345495047|ref|XP_001605930.2| PREDICTED: hypothetical protein LOC100122327 [Nasonia vitripennis]

 Score =  291 bits (744), Expect = 9e-76,   Method: Compositional matrix adjust.
 Identities = 140/324 (43%), Positives = 207/324 (63%), Gaps = 4/324 (1%)

Query: 242  ILDICQQEDVVSFEDRYPSSALKNCKKIGEGVYGEVF----KLNNSVIKIMPIEGDQSVN 297
            IL  C+Q   + F D +P S ++NC+KIGEGVYGEVF    K   SVIKI+PIEGD+ VN
Sbjct: 1218 ILKRCKQTSYLQFSDCFPDSYIENCRKIGEGVYGEVFLYQNKTEKSVIKIIPIEGDELVN 1277

Query: 298  GEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTELLKCSCVRGRYPDRLVTLWEEFAK 357
             E QKKF EI SEI++++E   L++ ++ +T  F  + +  CV G+YP++L+ LW  + +
Sbjct: 1278 CERQKKFHEILSEIIISEELHKLRFGSDFNTNGFVGVNRIMCVIGKYPEKLIDLWNAYDQ 1337

Query: 358  TKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIKYRSPNQTYAMILQVVFSLAVAEVELE 417
             K S ND P+MF +DQ++IILEL +GG D     +++ +++Y++ LQ  F+LAVAE  LE
Sbjct: 1338 EKNSENDCPTMFYDDQLYIILELAHGGQDLEAYVFQNASESYSIFLQTAFTLAVAEQALE 1397

Query: 418  FEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVGEKICYYDL 477
            FEHRDLH  NIL+ ++D +ES++ L     ++ T GV+V++IDFT+SR        + DL
Sbjct: 1398 FEHRDLHWGNILISKSDDNESTYKLGSEEISLPTKGVKVSVIDFTLSRMSYQSCKIFNDL 1457

Query: 478  SQDEELFEGEGDYQFDMYRMMRKQCQNNWQNFTPKNNVFWIHYLVDKATCLKKGYQYLRA 537
            + D  LF  +G+YQFD+YRMMR    N+WQ F P  NV W+ Y +DK     +  +    
Sbjct: 1458 AADPTLFTAQGEYQFDIYRMMRDNVNNDWQQFNPYTNVLWLDYTLDKMITAARYKRKTSK 1517

Query: 538  PRHQAFELLEELGQNALHFDSCYE 561
                A E ++ L +  L++ S +E
Sbjct: 1518 IHKSAIEGMKMLRKEVLNYKSAFE 1541

Source: Nasonia vitripennis

Species: Nasonia vitripennis

Genus: Nasonia

Family: Pteromalidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307190438|gb|EFN74474.1| Serine/threonine-protein kinase haspin [Camponotus floridanus]

 Score =  280 bits (717), Expect = 1e-72,   Method: Compositional matrix adjust.
 Identities = 142/326 (43%), Positives = 202/326 (61%), Gaps = 6/326 (1%)

Query: 242 ILDICQQEDVVSFEDRYPSSALKNCKKIGEGVYGEVFKL----NNSVIKIMPIEGDQSVN 297
           +L  C Q+  +SF   +P S LK C KIGEGVYGEVF        SV+KI+PIEGD+ VN
Sbjct: 397 VLQRCLQKSYLSFSHCFPDSYLKYCCKIGEGVYGEVFLYEYLDKKSVLKIIPIEGDKLVN 456

Query: 298 GEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTELLKCSCVRGRYPDRLVTLWEEFAK 357
           GE QKKF EI SEI++ KE  +L+  T   T  F E+    C+ G+YP RLV LW  +  
Sbjct: 457 GEPQKKFNEILSEIVIAKELDNLRLNTVYKTSGFVEVRSIKCIIGKYPKRLVELWNIYDD 516

Query: 358 TKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIKYRSPNQTYAMILQVVFSLAVAEVELE 417
            K S ND PSMFEE+Q++I LEL +GG D     +++  +  A+ LQ  F+LA+AE  LE
Sbjct: 517 NKTSDNDCPSMFEENQLYIALELGDGGEDMEAFVFQTAEEARALFLQTAFALAIAEKALE 576

Query: 418 FEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVGEKICYYDL 477
           FEHRDLH  N+L+ +T +    +TL+     + + GV+V+IIDFT+SR        Y DL
Sbjct: 577 FEHRDLHWGNVLISRTKEPYIYYTLNGREIKLPSNGVKVSIIDFTLSRMLYQGCCIYNDL 636

Query: 478 SQDEELFEGEGDYQFDMYRMMRKQCQNNWQNFTPKNNVFWIHYLVDKA-TCLKKGYQYLR 536
           + D  LF   G+YQF++YR+MR++ QNNW  F P  N+ W+HY++DK  T ++   + ++
Sbjct: 637 ALDPALFTAYGEYQFEIYRLMREKIQNNWNKFEPYTNILWLHYILDKMITAVRYKRKNVK 696

Query: 537 APRHQAFELLEELGQNALHFDSCYEM 562
             +H A   L+E     L++D+ ++ 
Sbjct: 697 VHKH-AIVRLKEFRDIILNYDNAFDF 721

Source: Camponotus floridanus

Species: Camponotus floridanus

Genus: Camponotus

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|270000886|gb|EEZ97333.1| hypothetical protein TcasGA2_TC011145 [Tribolium castaneum]

 Score =  277 bits (708), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 159/392 (40%), Positives = 221/392 (56%), Gaps = 46/392 (11%)

Query: 206  SRRSSSLSSTGDEDTLYETVLSSSLQYDDNEFCRKKILDICQQEDVVSFEDRYPS----- 260
            S RS SL S G         LS +LQ       +  +L  C Q DV+ FE  YP      
Sbjct: 640  SVRSLSLDSRGS--------LSPNLQIVT---AKDVVLRRCGQTDVLPFEQCYPQRYEAN 688

Query: 261  ------------SALKNC-----------KKIGEGVYGEVFKLNN-----SVIKIMPIEG 292
                        S L NC           KKIGEGVYGEVF   N     SV+K++PIEG
Sbjct: 689  LQVLIAKMLPKLSILANCAIIHFVYMYGSKKIGEGVYGEVFLYRNPKGGTSVMKVIPIEG 748

Query: 293  DQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTELLKCSCVRGRYPDRLVTLW 352
            D  VNGE+QKKF EI SEI++  E S+L+   +N+T  F+++    CV+G YP+RL+ LW
Sbjct: 749  DLIVNGEKQKKFEEILSEIVIAMELSNLRNNEKNTTTSFSQVQNVKCVQGVYPERLLDLW 808

Query: 353  EEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIKYRSPNQTYAMILQVVFSLAVA 412
            E + +TK S ND P MF   Q +I+LEL NGG+D     + +  Q YA+  Q+  +LAVA
Sbjct: 809  ELYDETKGSENDSPQMFPPHQQYIVLELANGGDDLESYVFNNAQQAYAVFQQIACALAVA 868

Query: 413  EVELEFEHRDLHMSNILVLQTDQDES-SFTLDDTHYAMKTAGVQVTIIDFTISRCFVGEK 471
            E +L+FEHRDLH  N+L+   ++ +   F L+     ++T GV+ TIIDFT+SR      
Sbjct: 869  EAQLKFEHRDLHWGNVLINTVNKSKVLPFRLNGKEILVETNGVEATIIDFTLSRVEFDGV 928

Query: 472  ICYYDLSQDEELFEGEGDYQFDMYRMMRKQCQNNWQNFTPKNNVFWIHYLVDKATCLKKG 531
              +YDLS D+ELF  +GDYQF++YR+M+K   N WQ+F P +N+ W+HY++DKA      
Sbjct: 929  AIFYDLSLDDELFHAKGDYQFEIYRLMQKANGNMWQHFEPFSNILWLHYILDKAVTSAVR 988

Query: 532  YQYLRAPRHQAFEL-LEELGQNALHFDSCYEM 562
            Y+  ++  H  +   L+++    L F S  E 
Sbjct: 989  YKNPKSKIHLKYMAKLKKIKDEILAFRSVAEF 1020

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|326931446|ref|XP_003211840.1| PREDICTED: serine/threonine-protein kinase haspin-like [Meleagris gallopavo]

 Score =  276 bits (706), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 135/291 (46%), Positives = 188/291 (64%), Gaps = 6/291 (2%)

Query: 240 KKILDICQQEDVVSFEDRYPSSALKNCKKIGEGVYGEVFKLNNS----VIKIMPIEGDQS 295
           +K+   CQQE+ ++FED  P   +KNCKKIGEGV+GEVF++++      +KI+PIEG + 
Sbjct: 96  EKVFRECQQEEPIAFEDCIPLDKMKNCKKIGEGVFGEVFQMDSERGPVALKIIPIEGTER 155

Query: 296 VNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTELLKCSCVRGRYPDRLVTLWEEF 355
           VNGE QK F EI  EI+++KE S L   + N T  F  L    CV+G YP+ L+  W+ +
Sbjct: 156 VNGEAQKSFGEILPEIIISKELSLLSEESTNRTVGFISLYSVHCVQGSYPNYLLKAWDTY 215

Query: 356 AKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDI--KYRSPNQTYAMILQVVFSLAVAE 413
            K   S ND P +F E+Q+FI+LE + GG+D  ++  K  +     +++ QV  SLAVAE
Sbjct: 216 NKATGSENDRPDLFGEEQLFIVLEFEFGGSDLENMRKKLSTVASAKSILHQVTASLAVAE 275

Query: 414 VELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVGEKIC 473
            EL FEHRDLH  N+LV +TD  E S+ L+ T   + TAG+ V IID+T+SR        
Sbjct: 276 QELHFEHRDLHWGNVLVKKTDAKELSYVLNGTTCTIPTAGIHVNIIDYTLSRLEKDGLTV 335

Query: 474 YYDLSQDEELFEGEGDYQFDMYRMMRKQCQNNWQNFTPKNNVFWIHYLVDK 524
           + DLS +EELF+G GDYQFD+YR M+ +  N W ++ P +NV W+HYL DK
Sbjct: 336 FCDLSTEEELFQGTGDYQFDIYRQMKAENSNGWTDYHPHSNVLWLHYLTDK 386

Source: Meleagris gallopavo

Species: Meleagris gallopavo

Genus: Meleagris

Family: Phasianidae

Order: Galliformes

Class: Aves

Phylum: Chordata

Superkingdom: Eukaryota

>gi|443429434|gb|AGC92718.1| haspin-like protein [Heliconius erato]

 Score =  274 bits (701), Expect = 7e-71,   Method: Compositional matrix adjust.
 Identities = 134/313 (42%), Positives = 187/313 (59%), Gaps = 26/313 (8%)

Query: 238 CRKKILDICQQEDVVSFEDRYPSSALKNCKKIGEGVYGEVFKLNNS-----VIKIMPIEG 292
            R  +L  C Q +VV F++ YP +ALKNC+KIGEGVYGEV+          V+KI+PI G
Sbjct: 50  ARDYVLRRCNQTEVVLFDECYPDTALKNCRKIGEGVYGEVYLWRARDGRARVLKIVPIAG 109

Query: 293 DQSVNGEEQKKFREIFSEIMVTKETSDLQ---------------------YRTENSTPCF 331
              VNGE+QK + EI SEI++  E S L+                     +   N++  F
Sbjct: 110 HIKVNGEDQKDYHEIISEIVIAMELSALRAPIAEIEQHLDEGKSVETLDLHSVMNASDVF 169

Query: 332 TELLKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK 391
            E+L   CV+G YP RL+ LWE + +TK S ND P++    Q +++LEL N G D    +
Sbjct: 170 NEVLAVRCVQGSYPSRLLDLWELYDETKGSENDTPAVLPTHQNYLVLELSNAGQDLESYQ 229

Query: 392 YRSPNQTYAMILQVVFSLAVAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKT 451
           + +  Q YA+  QV F LAVAE   +FEHRDLH  N+L+  TDQ  + F L    YA++ 
Sbjct: 230 FVNAEQAYALFKQVAFGLAVAEEAFQFEHRDLHWGNVLIAPTDQTHAHFVLRGRAYAVRR 289

Query: 452 AGVQVTIIDFTISRCFVGEKICYYDLSQDEELFEGEGDYQFDMYRMMRKQCQNNWQNFTP 511
            GV  TIID+++SR  + +   Y DL+ D+ LF+  GDYQF++YR+MR++  NNW+NF P
Sbjct: 290 RGVAATIIDYSLSRVSLRDAALYNDLADDDTLFDAVGDYQFEVYRLMRERLGNNWKNFEP 349

Query: 512 KNNVFWIHYLVDK 524
             N+ W+HY VDK
Sbjct: 350 YTNILWLHYTVDK 362

Source: Heliconius erato

Species: Heliconius erato

Genus: Heliconius

Family: Nymphalidae

Order: Lepidoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|332030036|gb|EGI69861.1| Putative serine/threonine-protein kinase haspin-like protein [Acromyrmex echinatior]

 Score =  274 bits (700), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 147/355 (41%), Positives = 211/355 (59%), Gaps = 8/355 (2%)

Query: 214  STGDEDTLYETVLSSSLQYDDNEF--CRKKILDICQQEDVVSFEDRYPSSALKNCKKIGE 271
            S+  + + +E  L  + Q   N F   R  +L  C Q   + FED +P   L++C KIGE
Sbjct: 1644 SSNSKLSYWEKSLIHNNQIISNHFSIARDVVLQRCSQNCYIPFEDCFPDLYLEHCYKIGE 1703

Query: 272  GVYGEVF----KLNNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENS 327
            GVYGEVF    +   SVIKI+PIE +Q VNGE QKKF EI SEI++ KE  +L+      
Sbjct: 1704 GVYGEVFLHECEGKKSVIKIIPIENEQLVNGEPQKKFNEILSEIVIAKELDNLKLNDTYK 1763

Query: 328  TPCFTELLKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDS 387
            T  F E+   SC+ G+YP++L+ LW  +   K S ND PSMF+E+Q++I LEL +GG D 
Sbjct: 1764 TNGFVEVKNISCIIGKYPEKLLELWNIYDNHKTSDNDCPSMFDENQLYIALELSHGGEDL 1823

Query: 388  GDIKYRSPNQTYAMILQVVFSLAVAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHY 447
                +++  +  A+ LQ   +LAVAE  LEFEHRDLH  N+L+ +T +    + L     
Sbjct: 1824 EAFVFQTAEEACALFLQTALALAVAEKALEFEHRDLHWGNVLISRTKEQYIYYNLGGREI 1883

Query: 448  AMKTAGVQVTIIDFTISRCFVGEKICYYDLSQDEELFEGEGDYQFDMYRMMRKQCQNNWQ 507
               + GV+V+IIDFT+SR        Y DL+ D  LF   G+YQFD+YR+MR + QN+W+
Sbjct: 1884 KFPSEGVKVSIIDFTLSRMLYQGCCIYNDLALDPALFTAHGEYQFDIYRLMRDKIQNDWR 1943

Query: 508  NFTPKNNVFWIHYLVDKA-TCLKKGYQYLRAPRHQAFELLEELGQNALHFDSCYE 561
             F P  NV W+HY++DK  T ++   + L+  +H A   L+E     L+++S Y+
Sbjct: 1944 KFEPYTNVLWLHYILDKMITAVRYKKKNLKVHKH-AIIRLKEFKDIILNYNSAYD 1997

Source: Acromyrmex echinatior

Species: Acromyrmex echinatior

Genus: Acromyrmex

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|443429433|gb|AGC92717.1| haspin-like protein [Heliconius erato]

 Score =  274 bits (700), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 134/313 (42%), Positives = 187/313 (59%), Gaps = 26/313 (8%)

Query: 238  CRKKILDICQQEDVVSFEDRYPSSALKNCKKIGEGVYGEVFKLNNS-----VIKIMPIEG 292
             R  +L  C Q +VV F++ YP +ALKNC+KIGEGVYGEV+          V+KI+PI G
Sbjct: 873  ARDYVLRRCNQTEVVLFDECYPDTALKNCRKIGEGVYGEVYLWRARDGRARVLKIVPIAG 932

Query: 293  DQSVNGEEQKKFREIFSEIMVTKETSDLQ---------------------YRTENSTPCF 331
               VNGE+QK + EI SEI++  E S L+                     +   N++  F
Sbjct: 933  HIKVNGEDQKDYHEIISEIVIAMELSALRAPIAEIEQHLDEGKSVETLDLHSVMNASDVF 992

Query: 332  TELLKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK 391
             E+L   CV+G YP RL+ LWE + +TK S ND P++    Q +++LEL N G D    +
Sbjct: 993  NEVLAVRCVQGSYPSRLLDLWELYDETKGSENDTPAVLPTHQNYLVLELSNAGQDLESYQ 1052

Query: 392  YRSPNQTYAMILQVVFSLAVAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKT 451
            + +  Q YA+  QV F LAVAE   +FEHRDLH  N+L+  TDQ  + F L    YA++ 
Sbjct: 1053 FVNAEQAYALFKQVAFGLAVAEEAFQFEHRDLHWGNVLIAPTDQTHAHFVLRGRAYAVRR 1112

Query: 452  AGVQVTIIDFTISRCFVGEKICYYDLSQDEELFEGEGDYQFDMYRMMRKQCQNNWQNFTP 511
             GV  TIID+++SR  + +   Y DL+ D+ LF+  GDYQF++YR+MR++  NNW+NF P
Sbjct: 1113 RGVAATIIDYSLSRVSLRDAALYNDLADDDTLFDAVGDYQFEVYRLMRERLGNNWKNFEP 1172

Query: 512  KNNVFWIHYLVDK 524
              N+ W+HY VDK
Sbjct: 1173 YTNILWLHYTVDK 1185

Source: Heliconius erato

Species: Heliconius erato

Genus: Heliconius

Family: Nymphalidae

Order: Lepidoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195164486|ref|XP_002023078.1| GL21152 [Drosophila persimilis] gi|194105163|gb|EDW27206.1| GL21152 [Drosophila persimilis]

 Score =  273 bits (697), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 153/382 (40%), Positives = 217/382 (56%), Gaps = 33/382 (8%)

Query: 157 RTKVSLAPGKMWKRSLINNSIREQHKVSHKFCRSFVS--YSEEFSSAVS-FKSRRSSSLS 213
           R+ + L PGK W++SL  NS R    V     RS  S   +   S  VS  K R+S  L+
Sbjct: 61  RSSLVLQPGK-WRKSL--NSWRRTQVVEPTLNRSDNSRLLTARASRQVSPSKGRKSVFLN 117

Query: 214 STGDEDTLYETVLSSSLQYDDNEFCRKKILDICQQEDVVSFEDRYPSSALKNCKKIGEGV 273
              +  T YE+                ++L  C Q   + FE  Y  S + N KKIGEG 
Sbjct: 118 DCNNIITDYES----------------QVLKHCDQRKPLRFEVVYAPSKMMNTKKIGEGA 161

Query: 274 YGEVFKLN-----------NSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQY 322
           YGEVFK             + V+K++PIEG   VNGE QK F +I  EI+++K+   L+ 
Sbjct: 162 YGEVFKYTMKRKKRDTRNCDVVLKVIPIEGSTEVNGELQKTFEQILPEILISKKMCSLRL 221

Query: 323 RTENSTPCFTELLKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKN 382
              N+T  +  + K S V+G+YP+ L+ LWE + + K+S NDHP +F +DQ+FI+LELK 
Sbjct: 222 GKNNTTHGYANIYKVSLVKGKYPEHLIKLWESYDEEKESENDHPRIFADDQLFIVLELKF 281

Query: 383 GGNDSGDIKYRSPNQTYAMILQVVFSLAVAEVELEFEHRDLHMSNILVLQTDQDESSFTL 442
            G D    K+ +  Q+Y ++ Q++ +LAV E E +FEHRDLH  NIL+  T + E S+  
Sbjct: 282 SGEDMSSFKFVNAEQSYYVLQQIMLALAVGEEECQFEHRDLHWGNILIEPTIKKEISYKF 341

Query: 443 DDTHYAMKTAGVQVTIIDFTISRCFVGEKICYYDLSQDEELFEGEGDYQFDMYRMMRKQC 502
                 + + GV+VTIID+T+SR  + E   + DLS DEELF   GDYQ+D+YR+MR + 
Sbjct: 342 HTKDLKVYSKGVKVTIIDYTLSRITIDEFCNFNDLSSDEELFAASGDYQYDIYRLMRDEL 401

Query: 503 QNNWQNFTPKNNVFWIHYLVDK 524
           +NNW +F PK NV W+ Y+  K
Sbjct: 402 KNNWASFAPKTNVLWLSYVTAK 423

Source: Drosophila persimilis

Species: Drosophila persimilis

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|350416482|ref|XP_003490963.1| PREDICTED: hypothetical protein LOC100748052 [Bombus impatiens]

 Score =  272 bits (696), Expect = 3e-70,   Method: Compositional matrix adjust.
 Identities = 133/330 (40%), Positives = 204/330 (61%), Gaps = 6/330 (1%)

Query: 238  CRKKILDICQQEDVVSFEDRYPSSALKNCKKIGEGVYGEVF----KLNNSVIKIMPIEGD 293
             R+ IL  C Q+D + F   +  S L++C+KIGEGVYGEVF    +   SVIKI+PIEG 
Sbjct: 687  AREVILQRCSQKDYIPFTTYFSDSYLEHCRKIGEGVYGEVFLYEQENKKSVIKIIPIEGS 746

Query: 294  QSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTELLKCSCVRGRYPDRLVTLWE 353
              VNGE QKKF EI SEI++  E  +L++ T  +T  F E+    C++G+YP+RL+ LW 
Sbjct: 747  DCVNGEPQKKFHEILSEIVIAMELHNLRFNTRYNTDGFVEVKDIKCIKGKYPERLIELWN 806

Query: 354  EFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIKYRSPNQTYAMILQVVFSLAVAE 413
             + + K S ND PSMF +DQ++I+LEL +GG D     + +  + + + +Q   +LAVAE
Sbjct: 807  IYDEEKHSDNDCPSMFNDDQLYIVLELGHGGQDLEAFVFNTAEEAHILFIQAALALAVAE 866

Query: 414  VELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVGEKIC 473
              +EFEHRDLH  NIL+   +++   + +   +  + + GV+V+IIDFT+SR        
Sbjct: 867  KAIEFEHRDLHWGNILISSANENYVHYKIGQKNIELVSKGVKVSIIDFTLSRVKYQGCSV 926

Query: 474  YYDLSQDEELFEGEGDYQFDMYRMMRKQCQNNWQNFTPKNNVFWIHYLVDKA-TCLKKGY 532
            + DL+ D  LF  +G+YQF++YR+MR + +NNWQ F P  N+ W+HY +DK  T ++   
Sbjct: 927  FNDLASDPTLFTAQGEYQFEIYRLMRDRVKNNWQAFEPYTNILWLHYTLDKMITAVRYKK 986

Query: 533  QYLRAPRHQAFELLEELGQNALHFDSCYEM 562
            + L+  ++     L+EL    L ++S ++ 
Sbjct: 987  KNLKIHKN-GITKLKELENEILTYNSAFDF 1015

Source: Bombus impatiens

Species: Bombus impatiens

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	562
FB|FBgn0046706	566	Haspin "Haspin" [Drosophila me	0.672	0.667	0.369	2.4e-67
ZFIN|ZDB-GENE-090313-379	1092	si:dkeyp-26a9.2 "si:dkeyp-26a9	0.507	0.260	0.448	9.8e-67
MGI|MGI:1194498	754	Gsg2 "germ cell-specific gene	0.574	0.428	0.421	4.8e-62
UNIPROTKB|E2R3P1	781	GSG2 "Uncharacterized protein"	0.781	0.562	0.348	5e-60
UNIPROTKB|Q2KIP2	781	GSG2 "Serine/threonine-protein	0.507	0.364	0.443	1e-59
UNIPROTKB|F1MG77	781	GSG2 "Serine/threonine-protein	0.507	0.364	0.443	2.2e-59
UNIPROTKB|Q8TF76	798	GSG2 "Serine/threonine-protein	0.574	0.404	0.403	3.5e-59
UNIPROTKB|I3LJ96	670	GSG2 "Uncharacterized protein"	0.814	0.683	0.338	2e-56
TAIR|locus:2012340	599	Haspin "Haspin-related gene" [	0.567	0.532	0.355	6.8e-51
WB|WBGene00007258	949	C01H6.9 [Caenorhabditis elegan	0.558	0.330	0.364	1.9e-49

FB|FBgn0046706 Haspin "Haspin" [Drosophila melanogaster (taxid:7227)]

 Score = 684 (245.8 bits), Expect = 2.4e-67, P = 2.4e-67
 Identities = 155/419 (36%), Positives = 240/419 (57%)

Query:   153 TTLHRTKVSLAPGKMWKRSLINNSIREQHKVSHKFCRSFVSYSEEFXXXXXXXXXXXXXX 212
             T +H + +SL PGK W++SL NN IR   K++     +F    E                
Sbjct:   164 TAVHPS-ISLNPGK-WRKSL-NNFIRS--KITET---NFTKKVER-------------RS 202

Query:   213 XXTGDEDTLYETVLSSSLQYDDNEFCRKKILDICQQEDVVSFEDRYPSSALKNCKKIGEG 272
                 D  +L   VL    +++ N++  + +L  C Q   + F   Y    L N KKIGEG
Sbjct:   203 SICQDRKSL---VLKGEHKFE-NKY-EEDVLKYCHQCTPLPFNTAYEQHKLLNTKKIGEG 257

Query:   273 VYGEVFK-----------LNNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQ 321
              YGEVF+           +++ V+KI+P+EG   +NGE+QK F +I  EI++TK+   L+
Sbjct:   258 AYGEVFRCSRNQEVLKDHISDIVLKIIPLEGSTVINGEKQKTFSQILPEIIITKKMCSLR 317

Query:   322 YRTENSTPCFTELLKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELK 381
                 NST  F  + K S V+GRYP   + LWE++   K S NDHP +F ++Q+F +LELK
Sbjct:   318 TSKTNSTNGFVSIQKVSLVKGRYPPHFIKLWEKYDNEKGSENDHPELFGDNQLFAVLELK 377

Query:   382 NGGNDSGDIKYRSPNQTYAMILQVVFSLAVAEVELEFEHRDLHMSNILVLQTDQDESSFT 441
               G+D  + K+ +  Q+Y  + Q++ +LAV E E +FEHRDLH+ NIL+  T++     T
Sbjct:   378 FAGSDMANFKFLNSEQSYYALQQIILALAVGEEEYQFEHRDLHLGNILIEYTNKKHIVCT 437

Query:   442 LDDTHYAMKTAGVQVTIIDFTISRCFVGEKICYY-DLSQDEELFEGEGDYQFDMYRMMRK 500
                ++  + + GV VTIID+T+SR  + +  CY+ DLS+DEELF+  GDYQ+D+YRMMR 
Sbjct:   438 FKSSNLTLLSKGVNVTIIDYTLSRVTIND-CCYFNDLSRDEELFQATGDYQYDVYRMMRN 496

Query:   501 QCQNNWQNFTPKNNVFWIHYLVDKATCLKKGYQYLRAPRHQAF-ELLEELGQNALHFDS 558
             + +NNW +F+PK N+ W+ Y++ K     K Y+ +    H+ + + ++EL    + F+S
Sbjct:   497 ELKNNWSSFSPKTNIIWLSYVIVKVLDSVK-YKSINTKVHRMYIDKIKELKNIIMTFES 554

GO:0006468 "protein phosphorylation" evidence=IEA;NAS

GO:0004674 "protein serine/threonine kinase activity" evidence=NAS

GO:0005575 "cellular_component" evidence=ND

GO:0005524 "ATP binding" evidence=IEA

GO:0004672 "protein kinase activity" evidence=IEA

ZFIN|ZDB-GENE-090313-379 si:dkeyp-26a9.2 "si:dkeyp-26a9.2" [Danio rerio (taxid:7955)]

 Score = 642 (231.1 bits), Expect = 9.8e-67, Sum P(3) = 9.8e-67
 Identities = 131/292 (44%), Positives = 182/292 (62%)

Query:   240 KKILDICQQEDVVSFEDRYPSSALKNCKKIGEGVYGEVFKL----NNSV-IKIMPIEGDQ 294
             +K+   CQQ   +SF D  P + +K+  KIGEG +GEVF      N SV +KI+P+EG Q
Sbjct:   755 EKVYQECQQSGPLSFSDCIPPARMKHLNKIGEGTFGEVFSTINDSNESVALKIIPVEGSQ 814

Query:   295 SVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTELLKCSCVRGRYPDRLVTLWEE 354
              VNGE QK F EI  EI+++KE S L  +  N +  F  L    CVRG YP+ L+  W++
Sbjct:   815 QVNGEHQKTFGEILHEIIISKELSSLNLKEFNKSDGFIGLNNLHCVRGCYPEALLKAWDK 874

Query:   355 FAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDI--KYRSPNQTYAMILQVVFSLAVA 412
             F   K S ND P  F+++Q+F+ILE + GG+D  ++  K  S  Q  +++ QV  SLAVA
Sbjct:   875 FDHQKGSENDRPDFFDDEQLFLILEFEFGGSDLENMNGKLSSMAQAKSVLHQVTASLAVA 934

Query:   413 EVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVGEKI 472
             E  L FEHRDLH  NILV       + F L+ T + ++T GV V IID+++SR  +    
Sbjct:   935 EQALCFEHRDLHWGNILVKNVKHKHNEFILNGTVHCIETRGVHVNIIDYSLSRLEIDGLT 994

Query:   473 CYYDLSQDEELFEGEGDYQFDMYRMMRKQCQNNWQNFTPKNNVFWIHYLVDK 524
                D+S DEELF G+GDYQF++YR+M+K+ +N W  + P +NV W+HYL DK
Sbjct:   995 VSCDISSDEELFMGQGDYQFEIYRLMKKENKNCWSAYNPHSNVLWLHYLADK 1046

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0004672 "protein kinase activity" evidence=IEA

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

MGI|MGI:1194498 Gsg2 "germ cell-specific gene 2" [Mus musculus (taxid:10090)]

 Score = 634 (228.2 bits), Expect = 4.8e-62, P = 4.8e-62
 Identities = 139/330 (42%), Positives = 193/330 (58%)

Query:   240 KKILDICQQEDVVSFEDRYPSSALKNCKKIGEGVYGEVFKLNNS----VIKIMPIEGDQS 295
             +K+   C QE  + F D   +  L+ C+KIGEGV+GEVF++ N      +KI+ IEG   
Sbjct:   417 EKVYGECNQEGPIPFSDCLSTEKLERCEKIGEGVFGEVFQIINDQAPVALKIIAIEGLDL 476

Query:   296 VNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTELLKCSCVRGRYPDRLVTLWEEF 355
             VNG  QK F EI  EI+++KE S L     N T  F  L    CV+G YP  L+  W+ +
Sbjct:   477 VNGSHQKTFEEILPEIIISKELSLLSSEAYNRTEGFIGLNSVHCVQGLYPPLLLKAWDHY 536

Query:   356 AKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIKYR-SPNQTYAMIL-QVVFSLAVAE 413
               TK+S ND P  F+EDQ+FIILE + GG D   +K + S   T   IL Q+  SLAVAE
Sbjct:   537 NTTKRSANDRPDFFQEDQLFIILEFEFGGVDLERMKTKLSSVATAKSILHQITASLAVAE 596

Query:   414 VELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVGEKIC 473
               L FEHRDLH  N+L+ +T+  E  +TL+     + T G+QV IID+T+SR      + 
Sbjct:   597 ASLHFEHRDLHWGNVLLKKTNLKELRYTLNGKTSTIPTHGLQVNIIDYTLSRLERDGIVV 656

Query:   474 YYDLSQDEELFEGEGDYQFDMYRMMRKQCQNNWQNFTPKNNVFWIHYLVDKA-TCLKKGY 532
             + D+S +E+LF GEGDYQF++YR+MRK+ +N W  + P NNV W+HYL DK    +K   
Sbjct:   657 FCDISAEEDLFTGEGDYQFEIYRLMRKENKNCWGEYHPYNNVLWLHYLTDKILNKMKFKT 716

Query:   533 QYLRAPRHQAFELLEELGQNALHFDSCYEM 562
             +   A   Q  + L+   +  L F S  ++
Sbjct:   717 KCQSAAMKQIRKNLQHFHRTVLSFSSATDL 746

GO:0000166 "nucleotide binding" evidence=IEA

GO:0003677 "DNA binding" evidence=IDA

GO:0004672 "protein kinase activity" evidence=ISO

GO:0004674 "protein serine/threonine kinase activity" evidence=IDA

GO:0005524 "ATP binding" evidence=ISO;IDA

GO:0005634 "nucleus" evidence=ISO;IDA

GO:0005694 "chromosome" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

GO:0005813 "centrosome" evidence=ISO

GO:0005819 "spindle" evidence=ISO

GO:0005856 "cytoskeleton" evidence=IEA

GO:0006468 "protein phosphorylation" evidence=ISO;IDA

GO:0007049 "cell cycle" evidence=IDA

GO:0007064 "mitotic sister chromatid cohesion" evidence=ISO

GO:0007243 "intracellular protein kinase cascade" evidence=ISO;IDA

GO:0016301 "kinase activity" evidence=IEA

GO:0016310 "phosphorylation" evidence=IEA

GO:0016568 "chromatin modification" evidence=IEA

GO:0016740 "transferase activity" evidence=IEA

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0071459 "protein localization to chromosome, centromeric region" evidence=ISO

GO:0072354 "histone kinase activity (H3-T3 specific)" evidence=ISO

GO:0090231 "regulation of spindle checkpoint" evidence=ISO

GO:2000751 "histone H3-T3 phosphorylation involved in chromosome passenger complex localization to kinetochore" evidence=ISO

UNIPROTKB|E2R3P1 GSG2 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 615 (221.5 bits), Expect = 5.0e-60, P = 5.0e-60
 Identities = 163/468 (34%), Positives = 237/468 (50%)

Query:    77 KAEKNNNSVGTVKSVGIHR-DLKDAEEGQGDAVA--QFNRLRNVTVRRGRKFIAEDADTT 133
             K    ++S   V+S G  + D ++A+ G G  +   + NR      RR RK + E  +T+
Sbjct:   276 KRATGHDSCQEVRSPGAAQMDCEEAD-GFGSCIVSGETNRPERTRPRRKRK-LEETVETS 333

Query:   134 L----QPNKVSLASGRFTMEDVDTTLHR----TKVSLAPGKMWKRSLIN--NSIREQHKV 183
             L    Q     +    F  +D+ T L      TK   A   + K+ ++   + +   H +
Sbjct:   334 LIHCHQFKSQKMEKDSFLTQDL-THLQNSCSWTKAR-ASFSLHKKKMVTAVSEVCSSHTI 391

Query:   184 SHKFCRSFVSYSEEFXXXXXXXXXXXXXXXXTGDEDTLYETVLSSSLQYDDNEFC-RKKI 242
             +     S +S                          ++Y      +L   D +     K+
Sbjct:   392 ASSLSGSLISEC-----LSPPVMIRTNSALSPWHCSSMYLLTPLKTLHVTDKKASDAAKV 446

Query:   243 LDICQQEDVVSFEDRYPSSALKNCKKIGEGVYGEVFK--LNNS--VIKIMPIEGDQSVNG 298
                C QE  V F     +  L+ C+KIGEGV+GEVF+  +N++   +KI+ IEG   VNG
Sbjct:   447 YGECSQEGPVPFSYCLSTEKLECCQKIGEGVFGEVFQTIVNHTPVALKIIAIEGPDLVNG 506

Query:   299 EEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTELLKCSCVRGRYPDRLVTLWEEFAKT 358
               QK F EI  EI+++KE S L     N T  F  L    CV+G YP  L+  W+ +  T
Sbjct:   507 AHQKTFEEILPEIIISKELSLLSDEVYNRTEGFIGLNSVHCVQGSYPPLLLRAWDHYNST 566

Query:   359 KKSYNDHPSMFEEDQIFIILELKNGGNDSGDIKYR-SPNQTYAMIL-QVVFSLAVAEVEL 416
             K S ND P  FEE+Q+FI+LE + GG +   ++ + S   T   IL Q+  SLAVAE  L
Sbjct:   567 KGSANDRPDFFEENQLFIVLEFEFGGTELEQMRTKLSSMATAKSILHQITASLAVAEASL 626

Query:   417 EFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVGEKICYYD 476
              FEHRDLH  N+L+ +T   E  +TL+     + T G+QV IID+T+SR      + + D
Sbjct:   627 HFEHRDLHWGNVLLKKTSVKELRYTLNGKTSTIPTHGLQVNIIDYTLSRLERDGIVVFCD 686

Query:   477 LSQDEELFEGEGDYQFDMYRMMRKQCQNNWQNFTPKNNVFWIHYLVDK 524
             +S DE+LF GEGDYQF++YR+MRK+  N W  + P NNV W+HYL DK
Sbjct:   687 ISMDEDLFTGEGDYQFEIYRLMRKENNNCWGEYHPYNNVLWLHYLTDK 734

GO:0090231 "regulation of spindle checkpoint" evidence=IEA

GO:0072354 "histone kinase activity (H3-T3 specific)" evidence=IEA

GO:0071459 "protein localization to chromosome, centromeric region" evidence=IEA

GO:0031965 "nuclear membrane" evidence=IEA

GO:0007243 "intracellular protein kinase cascade" evidence=IEA

GO:0007064 "mitotic sister chromatid cohesion" evidence=IEA

GO:0005819 "spindle" evidence=IEA

GO:0005813 "centrosome" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0003677 "DNA binding" evidence=IEA

UNIPROTKB|Q2KIP2 GSG2 "Serine/threonine-protein kinase haspin" [Bos taurus (taxid:9913)]

 Score = 612 (220.5 bits), Expect = 1.0e-59, P = 1.0e-59
 Identities = 129/291 (44%), Positives = 176/291 (60%)

Query:   240 KKILDICQQEDVVSFEDRYPSSALKNCKKIGEGVYGEVFKL--NNS--VIKIMPIEGDQS 295
             +K+   C Q   + F D      L+ C+KIGEGV+GEVF+   N++   +KI+ IEG   
Sbjct:   444 EKLYGECNQVGPIPFSDYLSEEKLECCEKIGEGVFGEVFQTVTNHTPVALKIIAIEGQNL 503

Query:   296 VNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTELLKCSCVRGRYPDRLVTLWEEF 355
             VNG  QK F EI  EI+++KE S L     N T  F  L    CV+G YP  L+  W+ +
Sbjct:   504 VNGAHQKTFEEILPEIIISKELSLLSDEACNRTEGFIGLNSVHCVQGSYPPLLLQAWDHY 563

Query:   356 AKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIKYR-SPNQTYAMIL-QVVFSLAVAE 413
               TK S ND P  F EDQ+FI+LE + GG D   ++ + S   T   IL Q+  SLAVAE
Sbjct:   564 HSTKGSANDRPDFFREDQLFIVLEFEFGGIDLEQMRKKLSSIATAKSILHQITASLAVAE 623

Query:   414 VELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVGEKIC 473
               L FEHRDLH  N+L+ +T   E  +TL+    ++ T G+QV IID+T+SR      + 
Sbjct:   624 ASLHFEHRDLHWGNVLLKKTSLKELHYTLNGKKSSIPTRGLQVNIIDYTLSRLERDGIVV 683

Query:   474 YYDLSQDEELFEGEGDYQFDMYRMMRKQCQNNWQNFTPKNNVFWIHYLVDK 524
             + D+S+DE+LF G+GDYQF++YR+MRK+  N W  + P NNV W+HYL DK
Sbjct:   684 FCDISRDEDLFMGQGDYQFEIYRLMRKENNNCWGEYHPYNNVLWLHYLTDK 734

GO:0090231 "regulation of spindle checkpoint" evidence=ISS

GO:0007064 "mitotic sister chromatid cohesion" evidence=ISS

GO:0005819 "spindle" evidence=ISS

GO:0005813 "centrosome" evidence=ISS

GO:0005634 "nucleus" evidence=ISS

GO:0072354 "histone kinase activity (H3-T3 specific)" evidence=ISS

GO:0071459 "protein localization to chromosome, centromeric region" evidence=ISS

GO:2000751 "histone H3-T3 phosphorylation involved in chromosome passenger complex localization to kinetochore" evidence=ISS

GO:0005694 "chromosome" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

UNIPROTKB|F1MG77 GSG2 "Serine/threonine-protein kinase haspin" [Bos taurus (taxid:9913)]

 Score = 609 (219.4 bits), Expect = 2.2e-59, P = 2.2e-59
 Identities = 129/291 (44%), Positives = 176/291 (60%)

Query:   240 KKILDICQQEDVVSFEDRYPSSALKNCKKIGEGVYGEVFKL--NNS--VIKIMPIEGDQS 295
             +K+   C Q   + F D      L+ C+KIGEGV+GEVF+   N++   +KI+ IEG   
Sbjct:   444 EKLYGECNQVGPIPFSDYLSEEKLECCEKIGEGVFGEVFQTVTNHTPVALKIIAIEGQDL 503

Query:   296 VNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTELLKCSCVRGRYPDRLVTLWEEF 355
             VNG  QK F EI  EI+++KE S L     N T  F  L    CV+G YP  L+  W+ +
Sbjct:   504 VNGAHQKTFEEILPEIIISKELSLLSDEACNRTEGFIGLNSVHCVQGSYPPLLLQAWDHY 563

Query:   356 AKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIKYR-SPNQTYAMIL-QVVFSLAVAE 413
               TK S ND P  F EDQ+FI+LE + GG D   ++ + S   T   IL Q+  SLAVAE
Sbjct:   564 HSTKGSANDRPDFFGEDQLFIVLEFEFGGIDLEQMRKKLSSIATAKSILHQITASLAVAE 623

Query:   414 VELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVGEKIC 473
               L FEHRDLH  N+L+ +T   E  +TL+    ++ T G+QV IID+T+SR      + 
Sbjct:   624 ASLHFEHRDLHWGNVLLKKTSLKELHYTLNGKTSSIPTRGLQVNIIDYTLSRLERDGIVV 683

Query:   474 YYDLSQDEELFEGEGDYQFDMYRMMRKQCQNNWQNFTPKNNVFWIHYLVDK 524
             + D+S+DE+LF G+GDYQF++YR+MRK+  N W  + P NNV W+HYL DK
Sbjct:   684 FCDISRDEDLFMGQGDYQFEIYRLMRKENNNCWGEYHPYNNVLWLHYLTDK 734

GO:0090231 "regulation of spindle checkpoint" evidence=IEA

GO:0072354 "histone kinase activity (H3-T3 specific)" evidence=IEA

GO:0071459 "protein localization to chromosome, centromeric region" evidence=IEA

GO:0031965 "nuclear membrane" evidence=IEA

GO:0007243 "intracellular protein kinase cascade" evidence=IEA

GO:0007064 "mitotic sister chromatid cohesion" evidence=IEA

GO:0005819 "spindle" evidence=IEA

GO:0005813 "centrosome" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0003677 "DNA binding" evidence=IEA

UNIPROTKB|Q8TF76 GSG2 "Serine/threonine-protein kinase haspin" [Homo sapiens (taxid:9606)]

 Score = 607 (218.7 bits), Expect = 3.5e-59, P = 3.5e-59
 Identities = 133/330 (40%), Positives = 189/330 (57%)

Query:   240 KKILDICQQEDVVSFEDRYPSSALKNCKKIGEGVYGEVFKL---NNSV-IKIMPIEGDQS 295
             +K+   C Q+  V F    P+  L+ C+KIGEGV+GEVF+    +  V IKI+ IEG   
Sbjct:   461 EKVYGECSQKGPVPFSHCLPTEKLQRCEKIGEGVFGEVFQTIADHTPVAIKIIAIEGPDL 520

Query:   296 VNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTELLKCSCVRGRYPDRLVTLWEEF 355
             VNG  QK F EI  EI+++KE S L     N T  F  L    CV+G YP  L+  W+ +
Sbjct:   521 VNGSHQKTFEEILPEIIISKELSLLSGEVCNRTEGFIGLNSVHCVQGSYPPLLLKAWDHY 580

Query:   356 AKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIKYR-SPNQTYAMIL-QVVFSLAVAE 413
               TK S ND P  F++DQ+FI+LE + GG D   ++ + S   T   IL Q+  SLAVAE
Sbjct:   581 NSTKGSANDRPDFFKDDQLFIVLEFEFGGIDLEQMRTKLSSLATAKSILHQLTASLAVAE 640

Query:   414 VELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVGEKIC 473
               L FEHRDLH  N+L+ +T   +  +TL+     + + G+QV+IID+T+SR      + 
Sbjct:   641 ASLRFEHRDLHWGNVLLKKTSLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLERDGIVV 700

Query:   474 YYDLSQDEELFEGEGDYQFDMYRMMRKQCQNNWQNFTPKNNVFWIHYLVDKATCLKKGYQ 533
             + D+S DE+LF G+GDYQFD+YR+M+K+  N W  + P +NV W+HYL DK         
Sbjct:   701 FCDVSMDEDLFTGDGDYQFDIYRLMKKENNNRWGEYHPYSNVLWLHYLTDKMLKQMTFKT 760

Query:   534 YLRAPR-HQAFELLEELGQNALHFDSCYEM 562
                 P   Q    ++E  +  L+F S  ++
Sbjct:   761 KCNTPAMKQIKRKIQEFHRTMLNFSSATDL 790

GO:0003677 "DNA binding" evidence=IEA

GO:0005694 "chromosome" evidence=IEA

GO:0004672 "protein kinase activity" evidence=IDA

GO:0005524 "ATP binding" evidence=IDA

GO:0006468 "protein phosphorylation" evidence=IDA

GO:0007243 "intracellular protein kinase cascade" evidence=IDA

GO:0005634 "nucleus" evidence=IDA

GO:0071459 "protein localization to chromosome, centromeric region" evidence=IMP

GO:0007064 "mitotic sister chromatid cohesion" evidence=IMP

GO:0090231 "regulation of spindle checkpoint" evidence=IMP

GO:0072354 "histone kinase activity (H3-T3 specific)" evidence=IMP

GO:0005819 "spindle" evidence=IDA

GO:0005813 "centrosome" evidence=IDA

GO:2000751 "histone H3-T3 phosphorylation involved in chromosome passenger complex localization to kinetochore" evidence=IMP

GO:0005515 "protein binding" evidence=IPI

GO:0005737 "cytoplasm" evidence=IDA

GO:0031965 "nuclear membrane" evidence=IDA

GO:0043231 "intracellular membrane-bounded organelle" evidence=IDA

UNIPROTKB|I3LJ96 GSG2 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 581 (209.6 bits), Expect = 2.0e-56, P = 2.0e-56
 Identities = 166/490 (33%), Positives = 236/490 (48%)

Query:    51 EDSVIEAHKKSVRFLDETLKKEKTDNKAEKNN-NSVGTVKSVG-IHRDLKDAEEGQGDAV 108
             E S + A  KS+R  +   ++E   N+      +S   + S G I  + + A   +G  +
Sbjct:   150 EHSELGADGKSMR--ESCCERELVGNRLRATGQDSCQELGSQGTIQVEYQGARRCKGGII 207

Query:   109 -AQFNRLRNVTVRRGRKFIAEDADTTLQPNKVSLASGRFTMEDVDTTLHRTKVSLAPGKM 167
              A+ NR       R RK   E A+T+L  +      G+   ED   T   T         
Sbjct:   208 PAKINRPERSGPSRKRKH-QETAETSLLHHH-QFKKGQKMEEDSFVTQELTHSQNTCS-- 263

Query:   168 WKRSLINNSIREQHKVS---HKFCRSFV---SYSEEFXXXXXX--XXXXXXXXXXTGDED 219
             W +S  + S  ++  V       C S+    S S+                         
Sbjct:   264 WTKSRASFSFHKKKIVVTAVSNVCSSYTVASSLSQSLMSEHSNPPVTNRTNSALSPWHSS 323

Query:   220 TLYETVLSSSLQYDDNEFC-RKKILDICQQEDVVSFEDRYPSSALKNCKKIGEGVYGEVF 278
             ++Y      SL   D +    +K+   C QE  V F        L+ C+KIGEGV+GEVF
Sbjct:   324 SMYLLTPLKSLHVTDKKASDAEKVYGECSQEGPVPFSYCLSEEKLECCEKIGEGVFGEVF 383

Query:   279 KL---NNSV-IKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTEL 334
             +    +  V +KI+ IEG   VNG  QK F EI  EI+++KE S L     + T  F  L
Sbjct:   384 QTIADHTPVALKIIAIEGPDLVNGVHQKTFEEILPEIIISKELSLLSAEGCHRTNGFIGL 443

Query:   335 LKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIKYRS 394
                 CV+G YP  L+  W+ +  TK S ND P  FEEDQ+FI+LE + GG D   +  + 
Sbjct:   444 NSVRCVQGSYPPLLLQAWDRYNSTKGSANDRPDFFEEDQLFIVLEFEFGGIDLEQMSSK- 502

Query:   395 PNQTYAMILQVVFSLAVAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGV 454
                     L  + + AVAE  L FEHRDLH  N+L+ +T   E  +TL    Y + + G+
Sbjct:   503 --------LNSI-ATAVAEASLHFEHRDLHWGNVLLKKTSLKELHYTLHGKTYPIASRGL 553

Query:   455 QVTIIDFTISRCFVGEKICYYDLSQDEELFEGEGDYQFDMYRMMRKQCQNNWQNFTPKNN 514
             QV IID+T+SR      + + D+S DE+LF GEGDYQF++YR+MRK+  N W ++ P NN
Sbjct:   554 QVNIIDYTLSRLERDGIVVFCDISMDEDLFTGEGDYQFEIYRLMRKENNNCWGDYHPYNN 613

Query:   515 VFWIHYLVDK 524
             V W+HYL DK
Sbjct:   614 VLWLHYLTDK 623

GO:0090231 "regulation of spindle checkpoint" evidence=IEA

GO:0072354 "histone kinase activity (H3-T3 specific)" evidence=IEA

GO:0071459 "protein localization to chromosome, centromeric region" evidence=IEA

GO:0031965 "nuclear membrane" evidence=IEA

GO:0007243 "intracellular protein kinase cascade" evidence=IEA

GO:0007064 "mitotic sister chromatid cohesion" evidence=IEA

GO:0005819 "spindle" evidence=IEA

GO:0005813 "centrosome" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0003677 "DNA binding" evidence=IEA

TAIR|locus:2012340 Haspin "Haspin-related gene" [Arabidopsis thaliana (taxid:3702)]

 Score = 509 (184.2 bits), Expect = 6.8e-51, Sum P(2) = 6.8e-51
 Identities = 118/332 (35%), Positives = 182/332 (54%)

Query:   218 EDTLYETVLSSSLQYDDNEFCRKKILDI---CQQEDVVSFEDRYPSSAL-KNCKKIGEGV 273
             ED L    L+S L     +F  + ILD+   C Q    +F + +      ++  KIGEG 
Sbjct:   239 EDELKRLSLTSDLIPTHQDF-DQPILDLLSACGQMRPSNFIEAFSKFCEPESIVKIGEGT 297

Query:   274 YGEVFKLNNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVT---KETSDLQYRTENSTPC 330
             YGE F+  +SV KI+PI+GD  VNGE QK+  E+  E++++    +  + +   +N  P 
Sbjct:   298 YGEAFRAGSSVCKIVPIDGDFRVNGEVQKRADELLEEVILSWTLNQLRECETTAQNLCPT 357

Query:   331 FTELLKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDI 390
             + +       +G Y   L+  WEE+     S NDHP  F E Q +++  L++GG D    
Sbjct:   358 YIKTQDIKLCQGPYDPILIKAWEEWDAKHGSENDHPD-FPEKQCYVMFVLEHGGKDLESF 416

Query:   391 KYRSPNQTYAMILQVVFSLAVAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMK 450
                + ++  ++++Q    LAVAE   EFEHRDLH  NIL+ + + D   F L+     +K
Sbjct:   417 VLLNFDEARSLLVQATAGLAVAEAAFEFEHRDLHWGNILLSRNNSDTLPFILEGKQVCIK 476

Query:   451 TAGVQVTIIDFTISRCFVGEKICYYDLSQDEELFEG-EGDYQFDMYRMMRKQCQNNWQNF 509
             T GVQ++IIDFT+SR   GEKI + DL+ D  LF+G +GD Q + YR M+   ++ W+  
Sbjct:   477 TFGVQISIIDFTLSRINTGEKILFLDLTSDPYLFKGPKGDKQSETYRKMKAVTEDYWEGS 536

Query:   510 TPKNNVFWIHYLVDKATCLKKGYQYLRAPRHQ 541
               + NV W+ YLVD     KK ++  R+ +H+
Sbjct:   537 FARTNVLWLIYLVD-ILLTKKSFE--RSSKHE 565

GO:0004672 "protein kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM;IDA

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0005737 "cytoplasm" evidence=IDA

GO:0007067 "mitosis" evidence=IMP

GO:0035402 "histone kinase activity (H3-T11 specific)" evidence=IDA

GO:0035407 "histone H3-T11 phosphorylation" evidence=IDA

GO:0072354 "histone kinase activity (H3-T3 specific)" evidence=IDA

GO:0072355 "histone H3-T3 phosphorylation" evidence=IDA

GO:0006260 "DNA replication" evidence=RCA

GO:0006270 "DNA replication initiation" evidence=RCA

GO:0006275 "regulation of DNA replication" evidence=RCA

GO:0006306 "DNA methylation" evidence=RCA

GO:0008283 "cell proliferation" evidence=RCA

GO:0009909 "regulation of flower development" evidence=RCA

GO:0010389 "regulation of G2/M transition of mitotic cell cycle" evidence=RCA

GO:0016458 "gene silencing" evidence=RCA

GO:0016570 "histone modification" evidence=RCA

GO:0031047 "gene silencing by RNA" evidence=RCA

GO:0034968 "histone lysine methylation" evidence=RCA

GO:0048449 "floral organ formation" evidence=RCA

GO:0048451 "petal formation" evidence=RCA

GO:0048453 "sepal formation" evidence=RCA

GO:0051225 "spindle assembly" evidence=RCA

GO:0051567 "histone H3-K9 methylation" evidence=RCA

GO:0051726 "regulation of cell cycle" evidence=RCA

WB|WBGene00007258 C01H6.9 [Caenorhabditis elegans (taxid:6239)]

 Score = 509 (184.2 bits), Expect = 1.9e-49, Sum P(2) = 1.9e-49
 Identities = 124/340 (36%), Positives = 182/340 (53%)

Query:   241 KILDICQQEDVVSFEDRYPSSAL--KNCKKIGEGVYGEVFKL---NNSV-IKIMPIEGDQ 294
             ++L +  Q++  ++ D  P SAL  +  KK+GEG YGEVF        V IKI+P E D 
Sbjct:   594 QLLHVVGQKESKTW-DSLPKSALDGRRVKKLGEGAYGEVFSTIWDGKPVAIKIVPFEKDG 652

Query:   295 -------SVNGEEQKKFREIFSEIMVTKETSDLQYRTE-NSTPCFTELLKCSCVRGRYPD 346
                      + EE +    +  E++V KE S L+     NSTP F E++    V G+YP 
Sbjct:   653 CNRQYFGEYHSEEMQTSDVVLPEVIVMKELSALRDEDAWNSTPNFIEMISAEVVMGKYPK 712

Query:   347 RLVTLWEEFAKTKKSYNDHPSMFEE-DQIFIILELKNGGNDSGDIKYRSPNQTYAMILQV 405
              L++ W+ + K K+S N  P ++   DQ FI+    NGG    D    S N+ +++I Q+
Sbjct:   713 GLLSAWDSYDKLKESENTRPDVYSSIDQNFILFVSANGGIALEDFVLESENELFSIIHQL 772

Query:   406 VFSLAVAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISR 465
             V S+  AE  LEFEHRDLH+ N+L+ +    E  +T+      + T G++V IIDFT+SR
Sbjct:   773 VLSMNAAEAALEFEHRDLHLGNVLIDRNGVKELYYTVHGQKVPLSTHGIKVNIIDFTLSR 832

Query:   466 CFVGEKICYYDLSQDEELFEGEGDYQFDMYRMMRKQCQNNWQNFTPKNNVFWIHY----L 521
                G    Y+DL  D  +FEG+ D QF++YR MRK C++NW+ F+ + N+ WI Y    L
Sbjct:   833 ISKGATTVYWDLENDPAIFEGQDDPQFEVYREMRKNCKSNWKKFSRRTNLMWIVYIANRL 892

Query:   522 VDKATCLKKGYQYLRAPRHQAFELLEELGQNALHFDSCYE 561
             +D   C  KG   L   R    ++L +       F SC E
Sbjct:   893 IDTKIC-PKGL--LTEKRRMELKVLFD---RFAEFGSCGE 926

GO:0004672 "protein kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0006468 "protein phosphorylation" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
P83103	HASP_DROME	2, ., 7, ., 1, 1, ., 1	0.3747	0.6725	0.6678	yes	N/A

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	562
COG5072	488	COG5072, ALK1, Serine/threonine kinase of the hasp	1e-23
pfam12330	99	pfam12330, DUF3635, Domain of unknown function (DU	2e-15

>gnl|CDD|227404 COG5072, ALK1, Serine/threonine kinase of the haspin family [Cell division and chromosome partitioning]

 Score =  103 bits (259), Expect = 1e-23
 Identities = 79/369 (21%), Positives = 140/369 (37%), Gaps = 67/369 (18%)

Query: 191 FVSYSEEFSSAVSFKSRRSSSLSSTGDEDTLYETVLSSSLQYDDN--EFCRKKILDICQQ 248
            +   +E ++ ++ K+  SSSLS++      + ++     +      +F   +   IC  
Sbjct: 104 TIVSKKEVTNLLNHKAL-SSSLSNSLKHKPSHRSLQKVKQRRKGPFSQFVNSQTKKICPV 162

Query: 249 EDVVSFE-----DRYPSSAL-----------------KNCKKIGEGVYGEVFKLNNSVIK 286
            D VS +         +S +                  N  +I +    + F   + V+ 
Sbjct: 163 PDQVSSDKIQAKLADSTSLVSLVSPFGLPGNAQDADVLNLVQILQWCDVKGFANLHQVVV 222

Query: 287 IMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTELLKCSCVRGRYPD 346
           ++ +    S+N EE  +      +  + K+ S        ST  +T              
Sbjct: 223 VLGLY--PSLNLEESDQLSSNNWQENICKKVS------LGSTQDYTVDCL-FLSLTELEH 273

Query: 347 -RLV---TLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIKYRSPNQTYAMI 402
             L         F +T K  +       ++ +++ L  K+ G     IK     +  +  
Sbjct: 274 LELRQWRECGSVFLETLKVVSL------DETLYLYLHFKDHGTPISIIKADRSEEELSFF 327

Query: 403 LQVVFSLAVAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFT 462
              +  L + E +  FEHR+L + NIL+     DE                  VT+IDF 
Sbjct: 328 WSCISILDILEKKFPFEHRNLTLDNILI-----DEG----------------NVTLIDFK 366

Query: 463 ISRCFVGEKICYYDLSQDEELFEGEGDYQFDMYRMMRKQCQNNWQNFTPKNNVFWIHYLV 522
           +SR    + I  Y+     +LF G  DYQF++YR+MR+  +  W  F P  NV W++YL 
Sbjct: 367 LSRLSYSQGIISYNRLDHPDLFNGVDDYQFEIYRLMRRLLKGRWAQFEPITNVLWLYYLS 426

Query: 523 DKATCLKKG 531
            +   LKK 
Sbjct: 427 HQL--LKKK 433

Length = 488

>gnl|CDD|204885 pfam12330, DUF3635, Domain of unknown function (DUF3635)

 Score = 71.5 bits (175), Expect = 2e-15
 Identities = 26/44 (59%), Positives = 34/44 (77%)

Query: 481 EELFEGEGDYQFDMYRMMRKQCQNNWQNFTPKNNVFWIHYLVDK 524
           E+LF G+GDYQF++YR+MRK+ +N W  F P  NV W+HYL DK
Sbjct: 1   EDLFNGKGDYQFEIYRLMRKELKNRWSEFEPYTNVLWLHYLSDK 44

This family may be a potential Haspin-related leucine-zipper. A leucine zipper was proposed to be present towards the C-terminus of human Haspin, (up-stream of the current family); however, as this domain would appear to span several helices and be largely within a loop structure, the actual zipper might be further downstream, and be this family, which is the very C-terminal part of the Sch. pombe sequence. Length = 99

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	562
KOG0595|consensus	429		100.0
KOG0615|consensus	475		100.0
KOG0598|consensus	357		99.98
KOG0659|consensus	318		99.97
KOG0600|consensus	560		99.97
KOG0581|consensus	364		99.97
KOG0616|consensus	355		99.97
KOG0661|consensus	538		99.97
KOG0593|consensus	396		99.97
KOG0663|consensus	419		99.97
KOG0605|consensus	550		99.97
KOG0592|consensus	604		99.97
KOG0583|consensus	370		99.97
KOG0575|consensus	592		99.96
KOG0591|consensus	375		99.96
KOG0594|consensus	323		99.96
KOG0597|consensus	808		99.96
KOG0032|consensus	382		99.95
KOG0578|consensus	550		99.95
cd05612	291	STKc_PRKX_like Catalytic domain of PRKX-like Prote	99.95
KOG0611|consensus	668		99.95
KOG0694|consensus	694		99.95
KOG0585|consensus	576		99.95
cd05571	323	STKc_PKB Catalytic domain of the Protein Serine/Th	99.95
PTZ00263	329	protein kinase A catalytic subunit; Provisional	99.95
KOG0660|consensus	359		99.95
KOG0198|consensus	313		99.94
KOG0658|consensus	364		99.94
PTZ00426	340	cAMP-dependent protein kinase catalytic subunit; P	99.94
cd05628	363	STKc_NDR1 Catalytic domain of the Protein Serine/T	99.94
cd05599	364	STKc_NDR_like Catalytic domain of Nuclear Dbf2-Rel	99.94
KOG0667|consensus	586		99.94
KOG0192|consensus	362		99.94
KOG0588|consensus	786		99.94
cd05598	376	STKc_LATS Catalytic domain of the Protein Serine/T	99.94
cd05587	324	STKc_cPKC Catalytic domain of the Protein Serine/T	99.94
KOG0582|consensus	516		99.94
cd05600	333	STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p-	99.94
cd05629	377	STKc_NDR_like_fungal Catalytic domain of Fungal Nu	99.94
cd05102	338	PTKc_VEGFR3 Catalytic domain of the Protein Tyrosi	99.94
cd05594	325	STKc_PKB_alpha Catalytic domain of the Protein Ser	99.94
cd07869	303	STKc_PFTAIRE1 Catalytic domain of the Serine/Threo	99.94
cd05593	328	STKc_PKB_gamma Catalytic domain of the Protein Ser	99.94
KOG0610|consensus	459		99.94
cd07871	288	STKc_PCTAIRE3 Catalytic domain of the Serine/Threo	99.94
cd05616	323	STKc_cPKC_beta Catalytic domain of the Protein Ser	99.94
cd05625	382	STKc_LATS1 Catalytic domain of the Protein Serine/	99.94
cd05595	323	STKc_PKB_beta Catalytic domain of the Protein Seri	99.94
cd05614	332	STKc_MSK2_N N-terminal catalytic domain of the Pro	99.94
cd05573	350	STKc_ROCK_NDR_like Catalytic domain of ROCK- and N	99.94
cd05585	312	STKc_YPK1_like Catalytic domain of Yeast Protein K	99.94
cd05626	381	STKc_LATS2 Catalytic domain of the Protein Serine/	99.94
KOG0662|consensus	292		99.94
cd05631	285	STKc_GRK4 Catalytic domain of the Protein Serine/T	99.94
cd05627	360	STKc_NDR2 Catalytic domain of the Protein Serine/T	99.94
KOG0033|consensus	355		99.94
KOG0580|consensus	281		99.94
cd05589	324	STKc_PKN Catalytic domain of the Protein Serine/Th	99.94
cd05601	330	STKc_CRIK Catalytic domain of the Protein Serine/T	99.93
KOG0201|consensus	467		99.93
cd05621	370	STKc_ROCK2 Catalytic domain of the Protein Serine/	99.93
cd05584	323	STKc_p70S6K Catalytic domain of the Protein Serine	99.93
cd05588	329	STKc_aPKC Catalytic domain of the Protein Serine/T	99.93
cd05597	331	STKc_DMPK_like Catalytic domain of Myotonic Dystro	99.93
cd05590	320	STKc_nPKC_eta Catalytic domain of the Protein Seri	99.93
cd05591	321	STKc_nPKC_epsilon Catalytic domain of the Protein	99.93
cd05617	327	STKc_aPKC_zeta Catalytic domain of the Protein Ser	99.93
cd05615	323	STKc_cPKC_alpha Catalytic domain of the Protein Se	99.93
cd05618	329	STKc_aPKC_iota Catalytic domain of the Protein Ser	99.93
KOG0574|consensus	502		99.93
cd05624	331	STKc_MRCK_beta Catalytic domain of the Protein Ser	99.93
cd05582	318	STKc_RSK_N N-terminal catalytic domain of the Prot	99.93
cd05622	371	STKc_ROCK1 Catalytic domain of the Protein Serine/	99.93
cd05592	316	STKc_nPKC_theta_delta Catalytic domain of the Prot	99.93
cd07848	287	STKc_CDKL5 Catalytic domain of the Serine/Threonin	99.93
cd05596	370	STKc_ROCK Catalytic domain of the Protein Serine/T	99.93
cd05096	304	PTKc_DDR1 Catalytic domain of the Protein Tyrosine	99.93
cd06649	331	PKc_MEK2 Catalytic domain of the dual-specificity	99.93
cd05603	321	STKc_SGK2 Catalytic domain of the Protein Serine/T	99.93
PLN00034	353	mitogen-activated protein kinase kinase; Provision	99.93
cd05570	318	STKc_PKC Catalytic domain of the Protein Serine/Th	99.93
PTZ00267	478	NIMA-related protein kinase; Provisional	99.93
cd07859	338	STKc_TDY_MAPK_plant Catalytic domain of the Serine	99.93
cd05575	323	STKc_SGK Catalytic domain of the Protein Serine/Th	99.93
KOG0589|consensus	426		99.93
cd05586	330	STKc_Sck1_like Catalytic domain of Suppressor of l	99.93
cd07876	359	STKc_JNK2 Catalytic domain of the Serine/Threonine	99.93
cd05620	316	STKc_nPKC_delta Catalytic domain of the Protein Se	99.93
KOG1989|consensus	738		99.93
cd06650	333	PKc_MEK1 Catalytic domain of the dual-specificity	99.93
cd05623	332	STKc_MRCK_alpha Catalytic domain of the Protein Se	99.93
PTZ00036	440	glycogen synthase kinase; Provisional	99.93
KOG0666|consensus	438		99.93
cd05604	325	STKc_SGK3 Catalytic domain of the Protein Serine/T	99.92
cd07874	355	STKc_JNK3 Catalytic domain of the Serine/Threonine	99.92
cd05605	285	STKc_GRK4_like Catalytic domain of G protein-coupl	99.92
cd05619	316	STKc_nPKC_theta Catalytic domain of the Protein Se	99.92
cd05602	325	STKc_SGK1 Catalytic domain of the Protein Serine/T	99.92
cd05608	280	STKc_GRK1 Catalytic domain of the Protein Serine/T	99.92
PHA03212	391	serine/threonine kinase US3; Provisional	99.92
PTZ00283	496	serine/threonine protein kinase; Provisional	99.92
cd05104	375	PTKc_Kit Catalytic domain of the Protein Tyrosine	99.92
KOG0608|consensus	1034		99.92
KOG0577|consensus	948		99.92
cd07862	290	STKc_CDK6 Catalytic domain of the Serine/Threonine	99.92
cd05106	374	PTKc_CSF-1R Catalytic domain of the Protein Tyrosi	99.92
cd07875	364	STKc_JNK1 Catalytic domain of the Serine/Threonine	99.92
cd08219	255	STKc_Nek3 Catalytic domain of the Protein Serine/T	99.92
cd07878	343	STKc_p38beta_MAPK11 Catalytic domain of the Serine	99.92
PF00069	260	Pkinase: Protein kinase domain Protein kinase; unc	99.92
KOG0579|consensus	1187		99.92
KOG4250|consensus	732		99.92
cd05105	400	PTKc_PDGFR_alpha Catalytic domain of the Protein T	99.92
PTZ00284	467	protein kinase; Provisional	99.92
cd07853	372	STKc_NLK Catalytic domain of the Serine/Threonine	99.92
cd07872	309	STKc_PCTAIRE2 Catalytic domain of the Serine/Threo	99.92
KOG4717|consensus	864		99.91
KOG0599|consensus	411		99.91
PTZ00266	1021	NIMA-related protein kinase; Provisional	99.91
KOG0586|consensus	596		99.91
KOG0197|consensus	468		99.91
cd06613	262	STKc_MAP4K3_like Catalytic domain of Mitogen-activ	99.91
cd06619	279	PKc_MKK5 Catalytic domain of the dual-specificity	99.91
KOG1187|consensus	361		99.91
KOG1035|consensus	1351		99.91
cd05580	290	STKc_PKA Catalytic domain of the Protein Serine/Th	99.91
cd07863	288	STKc_CDK4 Catalytic domain of the Serine/Threonine	99.91
cd05103	343	PTKc_VEGFR2 Catalytic domain of the Protein Tyrosi	99.91
PHA02988	283	hypothetical protein; Provisional	99.91
cd06625	263	STKc_MEKK3_like Catalytic domain of MAP/ERK kinase	99.91
cd05632	285	STKc_GRK5 Catalytic domain of the Protein Serine/T	99.91
KOG0612|consensus	1317		99.91
cd05108	316	PTKc_EGFR Catalytic domain of the Protein Tyrosine	99.91
cd06645	267	STKc_MAP4K3 Catalytic domain of the Protein Serine	99.91
cd05064	266	PTKc_EphR_A10 Catalytic domain of the Protein Tyro	99.91
KOG0690|consensus	516		99.91
cd05607	277	STKc_GRK7 Catalytic domain of the Protein Serine/T	99.91
cd05630	285	STKc_GRK6 Catalytic domain of the Protein Serine/T	99.91
cd05048	283	PTKc_Ror Catalytic Domain of the Protein Tyrosine	99.91
cd06622	286	PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS	99.91
PHA03207	392	serine/threonine kinase US3; Provisional	99.91
KOG2345|consensus	302		99.91
cd07873	301	STKc_PCTAIRE1 Catalytic domain of the Serine/Threo	99.9
cd06637	272	STKc_TNIK Catalytic domain of the Protein Serine/T	99.9
cd05109	279	PTKc_HER2 Catalytic domain of the Protein Tyrosine	99.9
cd05049	280	PTKc_Trk Catalytic domain of the Protein Tyrosine	99.9
cd08221	256	STKc_Nek9 Catalytic domain of the Protein Serine/T	99.9
cd06646	267	STKc_MAP4K5 Catalytic domain of the Protein Serine	99.9
cd08228	267	STKc_Nek6 Catalytic domain of the Protein Serine/T	99.9
cd06643	282	STKc_SLK Catalytic domain of the Protein Serine/Th	99.9
cd06644	292	STKc_STK10_LOK Catalytic domain of the Protein Ser	99.9
PRK13184	932	pknD serine/threonine-protein kinase; Reviewed	99.9
cd05068	261	PTKc_Frk_like Catalytic domain of Fyn-related kina	99.9
cd05114	256	PTKc_Tec_Rlk Catalytic domain of the Protein Tyros	99.9
cd05054	337	PTKc_VEGFR Catalytic domain of the Protein Tyrosin	99.9
cd05574	316	STKc_phototropin_like Catalytic domain of Phototro	99.9
cd05090	283	PTKc_Ror1 Catalytic domain of the Protein Tyrosine	99.9
cd05097	295	PTKc_DDR_like Catalytic domain of Discoidin Domain	99.9
cd08529	256	STKc_FA2-like Catalytic domain of the Protein Seri	99.9
cd05072	261	PTKc_Lyn Catalytic domain of the Protein Tyrosine	99.9
KOG0607|consensus	463		99.9
cd07868	317	STKc_CDK8 Catalytic domain of the Serine/Threonine	99.9
cd07861	285	STKc_CDK1_euk Catalytic domain of the Serine/Threo	99.9
cd05035	273	PTKc_Axl_like Catalytic Domain of Axl-like Protein	99.9
cd06611	280	STKc_SLK_like Catalytic domain of Ste20-like kinas	99.9
cd05113	256	PTKc_Btk_Bmx Catalytic domain of the Protein Tyros	99.9
cd05062	277	PTKc_IGF-1R Catalytic domain of the Protein Tyrosi	99.9
cd05089	297	PTKc_Tie1 Catalytic domain of the Protein Tyrosine	99.9
cd05084	252	PTKc_Fes Catalytic domain of the Protein Tyrosine	99.9
KOG0604|consensus	400		99.9
KOG0587|consensus	953		99.9
cd05093	288	PTKc_TrkB Catalytic domain of the Protein Tyrosine	99.9
cd08224	267	STKc_Nek6_Nek7 Catalytic domain of the Protein Ser	99.9
cd07839	284	STKc_CDK5 Catalytic domain of the Serine/Threonine	99.9
KOG0194|consensus	474		99.9
KOG0669|consensus	376		99.9
PHA03209	357	serine/threonine kinase US3; Provisional	99.9
cd08229	267	STKc_Nek7 Catalytic domain of the Protein Serine/T	99.9
cd05080	283	PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the	99.9
cd05071	262	PTKc_Src Catalytic domain of the Protein Tyrosine	99.9
cd06615	308	PKc_MEK Catalytic domain of the dual-specificity P	99.9
cd07870	291	STKc_PFTAIRE2 Catalytic domain of the Serine/Threo	99.9
cd05053	293	PTKc_FGFR Catalytic domain of the Protein Tyrosine	99.9
cd06654	296	STKc_PAK1 Catalytic domain of the Protein Serine/T	99.9
cd05116	257	PTKc_Syk Catalytic domain of the Protein Tyrosine	99.9
cd05609	305	STKc_MAST Catalytic domain of the Protein Serine/T	99.9
cd05578	258	STKc_Yank1 Catalytic domain of the Protein Serine/	99.9
cd05098	307	PTKc_FGFR1 Catalytic domain of the Protein Tyrosin	99.9
cd05092	280	PTKc_TrkA Catalytic domain of the Protein Tyrosine	99.89
cd08217	265	STKc_Nek2 Catalytic domain of the Protein Serine/T	99.89
cd06639	291	STKc_myosinIIIB Catalytic domain of the Protein Se	99.89
cd06652	265	STKc_MEKK2 Catalytic domain of the Protein Serine/	99.89
cd05033	266	PTKc_EphR Catalytic domain of Ephrin Receptor Prot	99.89
cd05046	275	PTK_CCK4 Pseudokinase domain of the Protein Tyrosi	99.89
cd05075	272	PTKc_Axl Catalytic domain of the Protein Tyrosine	99.89
cd05034	261	PTKc_Src_like Catalytic domain of Src kinase-like	99.89
cd05067	260	PTKc_Lck_Blk Catalytic domain of the Protein Tyros	99.89
cd08220	256	STKc_Nek8 Catalytic domain of the Protein Serine/T	99.89
cd05042	269	PTKc_Aatyk Catalytic domain of the Protein Tyrosin	99.89
KOG4236|consensus	888		99.89
cd06638	286	STKc_myosinIIIA Catalytic domain of the Protein Se	99.89
cd06656	297	STKc_PAK3 Catalytic domain of the Protein Serine/T	99.89
cd05070	260	PTKc_Fyn_Yrk Catalytic domain of the Protein Tyros	99.89
cd05111	279	PTK_HER3 Pseudokinase domain of the Protein Tyrosi	99.89
cd06636	282	STKc_MAP4K4_6 Catalytic domain of the Protein Seri	99.89
cd05099	314	PTKc_FGFR4 Catalytic domain of the Protein Tyrosin	99.89
cd08223	257	STKc_Nek4 Catalytic domain of the Protein Serine/T	99.89
KOG0193|consensus	678		99.89
cd06630	268	STKc_MEKK1 Catalytic domain of the Protein Serine/	99.89
cd05032	277	PTKc_InsR_like Catalytic domain of Insulin Recepto	99.89
cd05061	288	PTKc_InsR Catalytic domain of the Protein Tyrosine	99.89
cd05101	304	PTKc_FGFR2 Catalytic domain of the Protein Tyrosin	99.89
cd05045	290	PTKc_RET Catalytic domain of the Protein Tyrosine	99.89
cd05115	257	PTKc_Zap-70 Catalytic domain of the Protein Tyrosi	99.89
cd07844	291	STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like	99.89
cd05059	256	PTKc_Tec_like Catalytic domain of Tec-like Protein	99.89
cd05148	261	PTKc_Srm_Brk Catalytic domain of the Protein Tyros	99.89
cd06653	264	STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kina	99.89
cd06610	267	STKc_OSR1_SPAK Catalytic domain of the Protein Ser	99.89
cd05095	296	PTKc_DDR2 Catalytic domain of the Protein Tyrosine	99.89
KOG0668|consensus	338		99.89
cd06621	287	PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek	99.89
cd06629	272	STKc_MAPKKK_Bck1_like Catalytic domain of fungal B	99.89
cd05052	263	PTKc_Abl Catalytic domain of the Protein Tyrosine	99.89
cd05079	284	PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the	99.89
PHA03210	501	serine/threonine kinase US3; Provisional	99.89
cd05051	296	PTKc_DDR Catalytic domain of the Protein Tyrosine	99.89
cd05066	267	PTKc_EphR_A Catalytic domain of the Protein Tyrosi	99.89
cd06640	277	STKc_MST4 Catalytic domain of the Protein Serine/T	99.89
cd08227	327	PK_STRAD_alpha Pseudokinase domain of STE20-relate	99.89
cd06631	265	STKc_YSK4 Catalytic domain of the Protein Serine/T	99.89
cd05085	250	PTKc_Fer Catalytic domain of the Protein Tyrosine	99.89
cd06655	296	STKc_PAK2 Catalytic domain of the Protein Serine/T	99.89
cd05094	291	PTKc_TrkC Catalytic domain of the Protein Tyrosine	99.89
cd06607	307	STKc_TAO Catalytic domain of the Protein Serine/Th	99.89
cd07832	286	STKc_CCRK Catalytic domain of the Serine/Threonine	99.89
cd05057	279	PTKc_EGFR_like Catalytic domain of Epidermal Growt	99.89
cd05091	283	PTKc_Ror2 Catalytic domain of the Protein Tyrosine	99.89
cd06628	267	STKc_MAPKKK_Byr2_like Catalytic domain of fungal B	99.89
cd07867	317	STKc_CDC2L6 Catalytic domain of Serine/Threonine K	99.89
cd05107	401	PTKc_PDGFR_beta Catalytic domain of the Protein Ty	99.89
cd06658	292	STKc_PAK5 Catalytic domain of the Protein Serine/T	99.89
cd05060	257	PTKc_Syk_like Catalytic domain of Spleen Tyrosine	99.89
cd05050	288	PTKc_Musk Catalytic domain of the Protein Tyrosine	99.89
cd05069	260	PTKc_Yes Catalytic domain of the Protein Tyrosine	99.89
cd05055	302	PTKc_PDGFR Catalytic domain of the Protein Tyrosin	99.89
cd05088	303	PTKc_Tie2 Catalytic domain of the Protein Tyrosine	99.89
cd06632	258	STKc_MEKK1_plant Catalytic domain of the Protein S	99.89
cd05100	334	PTKc_FGFR3 Catalytic domain of the Protein Tyrosin	99.89
cd07845	309	STKc_CDK10 Catalytic domain of the Serine/Threonin	99.88
cd06617	283	PKc_MKK3_6 Catalytic domain of the dual-specificit	99.88
cd05613	290	STKc_MSK1_N N-terminal catalytic domain of the Pro	99.88
cd05081	284	PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of	99.88
cd07847	286	STKc_CDKL1_4 Catalytic domain of the Serine/Threon	99.88
cd07837	295	STKc_CdkB_plant Catalytic domain of the Serine/Thr	99.88
cd05082	256	PTKc_Csk Catalytic domain of the Protein Tyrosine	99.88
cd05078	258	PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain	99.88
cd06608	275	STKc_myosinIII_like Catalytic domain of Class III	99.88
cd07841	298	STKc_CDK7 Catalytic domain of the Serine/Threonine	99.88
cd05039	256	PTKc_Csk_like Catalytic domain of C-terminal Src k	99.88
cd05073	260	PTKc_Hck Catalytic domain of the Protein Tyrosine	99.88
cd08218	256	STKc_Nek1 Catalytic domain of the Protein Serine/T	99.88
cd05036	277	PTKc_ALK_LTK Catalytic domain of the Protein Tyros	99.88
cd06651	266	STKc_MEKK3 Catalytic domain of the Protein Serine/	99.88
PHA03211	461	serine/threonine kinase US3; Provisional	99.88
cd06642	277	STKc_STK25-YSK1 Catalytic domain of the Protein Se	99.88
cd05611	260	STKc_Rim15_like Catalytic domain of fungal Rim15-l	99.88
KOG0986|consensus	591		99.88
cd06616	288	PKc_MKK4 Catalytic domain of the dual-specificity	99.88
cd06659	297	STKc_PAK6 Catalytic domain of the Protein Serine/T	99.88
cd05038	284	PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the P	99.88
cd05056	270	PTKc_FAK Catalytic domain of the Protein Tyrosine	99.88
cd06609	274	STKc_MST3_like Catalytic domain of Mammalian Ste20	99.88
cd05047	270	PTKc_Tie Catalytic domain of Tie Protein Tyrosine	99.88
cd06647	293	STKc_PAK_I Catalytic domain of the Protein Serine/	99.88
cd08225	257	STKc_Nek5 Catalytic domain of the Protein Serine/T	99.88
cd05065	269	PTKc_EphR_B Catalytic domain of the Protein Tyrosi	99.88
KOG0584|consensus	632		99.88
cd06635	317	STKc_TAO1 Catalytic domain of the Protein Serine/T	99.88
cd05058	262	PTKc_Met_Ron Catalytic domain of the Protein Tyros	99.88
cd06917	277	STKc_NAK1_like Catalytic domain of Fungal Nak1-lik	99.88
cd05577	277	STKc_GRK Catalytic domain of the Protein Serine/Th	99.88
cd05063	268	PTKc_EphR_A2 Catalytic domain of the Protein Tyros	99.88
cd06620	284	PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr	99.88
cd06605	265	PKc_MAPKK Catalytic domain of the dual-specificity	99.88
cd07846	286	STKc_CDKL2_3 Catalytic domain of the Serine/Threon	99.88
cd06641	277	STKc_MST3 Catalytic domain of the Protein Serine/T	99.88
cd07860	284	STKc_CDK2_3 Catalytic domain of the Serine/Threoni	99.88
cd06612	256	STKc_MST1_2 Catalytic domain of the Protein Serine	99.88
cd06626	264	STKc_MEKK4 Catalytic domain of the Protein Serine/	99.88
cd06633	313	STKc_TAO3 Catalytic domain of the Protein Serine/T	99.88
cd05076	274	PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of th	99.88
cd07850	353	STKc_JNK Catalytic domain of the Serine/Threonine	99.88
cd05077	262	PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of th	99.88
cd05112	256	PTKc_Itk Catalytic domain of the Protein Tyrosine	99.88
cd05581	280	STKc_PDK1 Catalytic domain of the Protein Serine/T	99.88
cd05083	254	PTKc_Chk Catalytic domain of the Protein Tyrosine	99.88
cd05583	288	STKc_MSK_N N-terminal catalytic domain of the Prot	99.88
KOG1152|consensus	772		99.88
KOG0671|consensus	415		99.87
KOG4645|consensus	1509		99.87
cd05633	279	STKc_GRK3 Catalytic domain of the Protein Serine/T	99.87
cd05572	262	STKc_cGK_PKG Catalytic domain of the Protein Serin	99.87
cd08528	269	STKc_Nek10 Catalytic domain of the Protein Serine/	99.87
PLN00009	294	cyclin-dependent kinase A; Provisional	99.87
cd07836	284	STKc_Pho85 Catalytic domain of the Serine/Threonin	99.87
cd08215	258	STKc_Nek Catalytic domain of the Protein Serine/Th	99.87
cd05110	303	PTKc_HER4 Catalytic domain of the Protein Tyrosine	99.87
cd07843	293	STKc_CDC2L1 Catalytic domain of the Serine/Threoni	99.87
smart00219	258	TyrKc Tyrosine kinase, catalytic domain. Phosphotr	99.87
KOG0603|consensus	612		99.87
cd06624	268	STKc_ASK Catalytic domain of the Protein Serine/Th	99.87
cd08530	256	STKc_CNK2-like Catalytic domain of the Protein Ser	99.87
cd05606	278	STKc_beta_ARK Catalytic domain of the Protein Seri	99.87
cd05037	259	PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the	99.87
cd06623	264	PKc_MAPKK_plant_like Catalytic domain of Plant dua	99.87
cd05043	280	PTK_Ryk Pseudokinase domain of Ryk (Receptor relat	99.87
cd00192	262	PTKc Catalytic domain of Protein Tyrosine Kinases.	99.87
KOG0984|consensus	282		99.87
cd05579	265	STKc_MAST_like Catalytic domain of Microtubule-ass	99.87
cd07842	316	STKc_CDK8_like Catalytic domain of Cyclin-Dependen	99.87
cd05118	283	STKc_CMGC Catalytic domain of CMGC family Serine/T	99.87
cd07864	302	STKc_CDK12 Catalytic domain of the Serine/Threonin	99.87
cd05040	257	PTKc_Ack_like Catalytic domain of the Protein Tyro	99.87
cd05041	251	PTKc_Fes_like Catalytic domain of Fes-like Protein	99.87
cd06627	254	STKc_Cdc7_like Catalytic domain of Cell division c	99.87
cd07858	337	STKc_TEY_MAPK_plant Catalytic domain of the Serine	99.87
cd07840	287	STKc_CDK9_like Catalytic domain of Cyclin-Dependen	99.87
cd05086	268	PTKc_Aatyk2 Catalytic domain of the Protein Tyrosi	99.87
cd08226	328	PK_STRAD_beta Pseudokinase domain of STE20-related	99.87
PHA03390	267	pk1 serine/threonine-protein kinase 1; Provisional	99.86
cd07880	343	STKc_p38gamma_MAPK12 Catalytic domain of the Serin	99.86
cd07830	283	STKc_MAK_like Catalytic domain of Male germ cell-A	99.86
cd05123	250	STKc_AGC Catalytic domain of AGC family Protein Se	99.86
cd06634	308	STKc_TAO2 Catalytic domain of the Protein Serine/T	99.86
cd05087	269	PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein	99.86
cd07855	334	STKc_ERK5 Catalytic domain of the Serine/Threonine	99.86
KOG1026|consensus	774		99.86
cd06648	285	STKc_PAK_II Catalytic domain of the Protein Serine	99.86
cd07831	282	STKc_MOK Catalytic domain of the Serine/Threonine	99.86
cd05074	273	PTKc_Tyro3 Catalytic domain of the Protein Tyrosin	99.86
cd07835	283	STKc_CDK1_like Catalytic domain of Cyclin-Dependen	99.86
cd06618	296	PKc_MKK7 Catalytic domain of the dual-specificity	99.86
cd07865	310	STKc_CDK9 Catalytic domain of the Serine/Threonine	99.86
KOG1095|consensus	1025		99.86
cd06606	260	STKc_MAPKKK Catalytic domain of the Protein Serine	99.86
PF07714	259	Pkinase_Tyr: Protein tyrosine kinase Protein kinas	99.86
cd05610	669	STKc_MASTL Catalytic domain of the Protein Serine/	99.86
KOG0695|consensus	593		99.86
KOG1006|consensus	361		99.86
cd07877	345	STKc_p38alpha_MAPK14 Catalytic domain of the Serin	99.86
cd07879	342	STKc_p38delta_MAPK13 Catalytic domain of the Serin	99.86
cd07854	342	STKc_MAPK4_6 Catalytic domain of the Serine/Threon	99.86
cd07849	336	STKc_ERK1_2_like Catalytic domain of Extracellular	99.86
cd07857	332	STKc_MPK1 Catalytic domain of the Serine/Threonine	99.86
cd06657	292	STKc_PAK4 Catalytic domain of the Protein Serine/T	99.86
cd08216	314	PK_STRAD Pseudokinase domain of STE20-related kina	99.86
KOG0696|consensus	683		99.86
cd08222	260	STKc_Nek11 Catalytic domain of the Protein Serine/	99.85
cd07834	330	STKc_MAPK Catalytic domain of the Serine/Threonine	99.85
KOG0614|consensus	732		99.85
cd05044	269	PTKc_c-ros Catalytic domain of the Protein Tyrosin	99.85
cd07866	311	STKc_BUR1 Catalytic domain of the Serine/Threonine	99.85
cd07833	288	STKc_CDKL Catalytic domain of Cyclin-Dependent pro	99.85
PRK09188	365	serine/threonine protein kinase; Provisional	99.85
PHA02882	294	putative serine/threonine kinase; Provisional	99.85
cd06614	286	STKc_PAK Catalytic domain of the Protein Serine/Th	99.85
KOG0983|consensus	391		99.85
KOG0596|consensus	677		99.85
cd05122	253	PKc_STE Catalytic domain of STE family Protein Kin	99.84
cd07856	328	STKc_Sty1_Hog1 Catalytic domain of the Serine/Thre	99.84
KOG4721|consensus	904		99.84
PTZ00024	335	cyclin-dependent protein kinase; Provisional	99.84
cd07852	337	STKc_MAPK15 Catalytic domain of the Serine/Threoni	99.84
cd07851	343	STKc_p38 Catalytic domain of the Serine/Threonine	99.84
KOG1151|consensus	775		99.84
cd07838	287	STKc_CDK4_6_like Catalytic domain of Cyclin-Depend	99.84
COG5072	488	ALK1 Serine/threonine kinase of the haspin family	99.84
KOG1094|consensus	807		99.83
cd07829	282	STKc_CDK_like Catalytic domain of Cyclin-Dependent	99.83
KOG0199|consensus	1039		99.83
KOG3653|consensus	534		99.83
PLN03225	566	Serine/threonine-protein kinase SNT7; Provisional	99.83
cd05576	237	STKc_RPK118_like Catalytic domain of the Protein S	99.83
KOG0576|consensus	829		99.83
KOG0670|consensus	752		99.82
KOG4278|consensus	1157		99.82
KOG4279|consensus	1226		99.82
KOG0664|consensus	449		99.82
cd05147	190	RIO1_euk RIO kinase family; eukaryotic RIO1, catal	99.81
KOG1345|consensus	378		99.81
KOG0196|consensus	996		99.81
KOG4257|consensus	974		99.8
KOG1027|consensus	903		99.8
KOG2052|consensus	513		99.79
PLN03224	507	probable serine/threonine protein kinase; Provisio	99.79
cd05145	190	RIO1_like RIO kinase family; RIO1, RIO3 and simila	99.79
PLN00113	968	leucine-rich repeat receptor-like protein kinase;	99.79
KOG1290|consensus	590		99.77
smart00221	225	STYKc Protein kinase; unclassified specificity. Ph	99.77
KOG0200|consensus	609		99.76
KOG1025|consensus	1177		99.75
cd00180	215	PKc Catalytic domain of Protein Kinases. Protein K	99.75
PRK10345	210	hypothetical protein; Provisional	99.75
smart00220	244	S_TKc Serine/Threonine protein kinases, catalytic	99.74
KOG0665|consensus	369		99.71
PRK14879	211	serine/threonine protein kinase; Provisional	99.7
smart00090	237	RIO RIO-like kinase.	99.7
KOG1163|consensus	341		99.69
PRK12274	218	serine/threonine protein kinase; Provisional	99.69
KOG1167|consensus	418		99.68
COG0515	384	SPS1 Serine/threonine protein kinase [General func	99.67
PRK10359	232	lipopolysaccharide core biosynthesis protein; Prov	99.67
PRK09605	535	bifunctional UGMP family protein/serine/threonine	99.67
KOG1164|consensus	322		99.66
cd05144	198	RIO2_C RIO kinase family; RIO2, C-terminal catalyt	99.66
TIGR03724	199	arch_bud32 Kae1-associated kinase Bud32. Members o	99.66
cd05119	187	RIO RIO kinase family, catalytic domain. The RIO k	99.63
KOG1165|consensus	449		99.6
cd05120	155	APH_ChoK_like Aminoglycoside 3'-phosphotransferase	99.55
KOG1166|consensus	974		99.52
PRK01723	239	3-deoxy-D-manno-octulosonic-acid kinase; Reviewed	99.49
KOG0590|consensus	601		99.48
PLN00181	793	protein SPA1-RELATED; Provisional	99.46
KOG0603|consensus	612		99.38
TIGR01982	437	UbiB 2-polyprenylphenol 6-hydroxylase. This model	99.26
cd05151	170	ChoK Choline Kinase (ChoK). The ChoK subfamily is	99.25
PF12330	98	DUF3635: Domain of unknown function (DUF3635); Int	99.19
cd05146	197	RIO3_euk RIO kinase family; eukaryotic RIO3, catal	99.17
PRK04750	537	ubiB putative ubiquinone biosynthesis protein UbiB	99.16
smart00750	176	KIND kinase non-catalytic C-lobe domain. It is an	99.15
KOG4158|consensus	598		99.14
KOG1024|consensus	563		99.12
KOG3087|consensus	229		99.01
COG3642	204	Mn2+-dependent serine/threonine protein kinase [Si	98.97
KOG1240|consensus	1431		98.92
cd05154	223	ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 an	98.91
PF14531	288	Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_	98.9
KOG0606|consensus	1205		98.85
PF01163	188	RIO1: RIO1 family; InterPro: IPR018934 Protein pho	98.81
KOG0590|consensus	601		98.8
KOG2464|consensus	246		98.6
KOG0601|consensus	524		98.52
PRK15123	268	lipopolysaccharide core heptose(I) kinase RfaP; Pr	98.48
KOG0601|consensus	524		98.45
COG0478	304	RIO-like serine/threonine protein kinase fused to	98.38
KOG1033|consensus	516		98.32
PF06176	229	WaaY: Lipopolysaccharide core biosynthesis protein	98.32
PF06293	206	Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family;	98.26
TIGR02172	226	Fb_sc_TIGR02172 Fibrobacter succinogenes paralogou	98.13
KOG0195|consensus	448		98.03
KOG1243|consensus	690		98.02
COG0661	517	AarF Predicted unusual protein kinase [General fun	97.98
KOG1023|consensus	484		97.9
PRK09902	216	hypothetical protein; Provisional	97.88
PF01636	239	APH: Phosphotransferase enzyme family This family	97.88
COG2112	201	Predicted Ser/Thr protein kinase [Signal transduct	97.87
KOG1235|consensus	538		97.76
COG1718	268	RIO1 Serine/threonine protein kinase involved in c	97.75
KOG3741|consensus	655		97.68
cd05150	244	APH Aminoglycoside 3'-phosphotransferase (APH). Th	97.66
PF13095	207	FTA2: Kinetochore Sim4 complex subunit FTA2	97.65
cd05155	235	APH_ChoK_like_1 Uncharacterized bacterial proteins	97.63
PLN02876	822	acyl-CoA dehydrogenase	97.61
KOG2268|consensus	465		97.14
PRK10593	297	hypothetical protein; Provisional	97.12
cd05153	296	HomoserineK_II Homoserine Kinase, type II. Homoser	97.06
PF12260	188	PIP49_C: Protein-kinase domain of FAM69; InterPro:	96.93
TIGR02721	256	ycfN_thiK thiamine kinase. Members of this family	96.8
KOG1266|consensus	458		96.77
KOG0606|consensus	1205		96.7
TIGR00938	307	thrB_alt homoserine kinase, Neisseria type. Homose	96.65
PF10707	199	YrbL-PhoP_reg: PhoP regulatory network protein Yrb	96.64
KOG2270|consensus	520		96.6
cd05157	235	ETNK_euk Ethanolamine kinase (ETNK) in eukaryotes.	96.55
PRK05231	319	homoserine kinase; Provisional	96.55
PRK09550	401	mtnK methylthioribose kinase; Reviewed	96.49
KOG0576|consensus	829		95.86
cd05152	276	MPH2' Macrolide 2'-Phosphotransferase (MPH2'). MPH	95.53
KOG1236|consensus	565		95.03
TIGR01767	370	MTRK 5-methylthioribose kinase. This enzyme is inv	94.07
PHA03111	444	Ser/Thr kinase; Provisional	93.96
TIGR02904	309	spore_ysxE spore coat protein YsxE. Members of thi	93.87
PTZ00384	383	choline kinase; Provisional	93.71
PF05445	434	Pox_ser-thr_kin: Poxvirus serine/threonine protein	93.17
PLN02756	418	S-methyl-5-thioribose kinase	92.95
cd05156	302	ChoK_euk Choline Kinase (ChoK) in eukaryotes. The	92.0
TIGR02906	313	spore_CotS spore coat protein, CotS family. Member	91.45
cd05610	669	STKc_MASTL Catalytic domain of the Protein Serine/	90.32
PF01633	211	Choline_kinase: Choline/ethanolamine kinase; Inter	89.38
COG4248	637	Uncharacterized protein with protein kinase and he	89.32
PRK10271	188	thiK thiamine kinase; Provisional	89.27
PLN02236	344	choline kinase	88.43
smart00587	196	CHK ZnF_C4 abd HLH domain containing kinases domai	85.87
COG2334	331	Putative homoserine kinase type II (protein kinase	85.81
COG0510	269	ycfN Thiamine kinase and related kinases [Coenzyme	83.76
PRK11768	325	serine/threonine protein kinase; Provisional	82.88
KOG2137|consensus	700		81.69
PLN02421	330	phosphotransferase, alcohol group as acceptor/kina	80.93
COG3173	321	Predicted aminoglycoside phosphotransferase [Gener	80.14

>KOG0595|consensus

Probab=100.00  E-value=3.4e-34  Score=295.78  Aligned_cols=192  Identities=23%  Similarity=0.332  Sum_probs=163.9

Q ss_pred             CCCceeeeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCccccc
Q psy9184         261 SALKNCKKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTEL  334 (562)
Q Consensus       261 ~~y~~~~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~l  334 (562)
                      ++|...+.||.|+||+||+|      ..||||.|.+..      ...+..+.+..|+.||++|+|               
T Consensus        10 ~~y~~~~~iG~GsfavVykg~h~~~~~~VAIK~i~~~~------l~~k~~e~L~~Ei~iLkel~H---------------   68 (429)
T KOG0595|consen   10 GDYELSREIGSGSFAVVYKGRHKKSGTEVAIKCIAKKK------LNKKLVELLLSEIKILKELKH---------------   68 (429)
T ss_pred             ccceehhhccCcceEEEEEeEeccCCceEEeeeehhhc------cCHHHHHHHHHHHHHHHhcCC---------------
Confidence            67999999999999999999      899999999763      246677888999999999999               


Q ss_pred             ccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc---cCCHHHHHHHHHHHHHHHHH
Q psy9184         335 LKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK---YRSPNQTYAMILQVVFSLAV  411 (562)
Q Consensus       335 ~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~---~l~e~~i~~I~~QIl~aL~y  411 (562)
                                 ||||+++++..+             ++.+|||||||+||++-+++.   .+++..++.++.||+.||++
T Consensus        69 -----------~nIV~l~d~~~~-------------~~~i~lVMEyC~gGDLs~yi~~~~~l~e~t~r~Fm~QLA~alq~  124 (429)
T KOG0595|consen   69 -----------PNIVRLLDCIED-------------DDFIYLVMEYCNGGDLSDYIRRRGRLPEATARHFMQQLASALQF  124 (429)
T ss_pred             -----------cceeeEEEEEec-------------CCeEEEEEEeCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHH
Confidence                       999999999986             669999999999998877775   48999999999999999999


Q ss_pred             HHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecC----CcEEEeecCCCcccc-CC
Q psy9184         412 AEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVG----EKICYYDLSQDEELF-EG  486 (562)
Q Consensus       412 LH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~----~g~v~~~l~~~pelF-~g  486 (562)
                      ||+ .+||||||||+||||.......              ....+||+|||+||....    ...++.++|||||+. .+
T Consensus       125 L~~-~~IiHRDLKPQNiLLs~~~~~~--------------~~~~LKIADFGfAR~L~~~~~a~tlcGSplYMAPEV~~~~  189 (429)
T KOG0595|consen  125 LHE-NNIIHRDLKPQNILLSTTARND--------------TSPVLKIADFGFARFLQPGSMAETLCGSPLYMAPEVIMSQ  189 (429)
T ss_pred             HHH-CCeeeccCCcceEEeccCCCCC--------------CCceEEecccchhhhCCchhHHHHhhCCccccCHHHHHhc
Confidence            999 6999999999999999873210              003799999999999886    346679999999998 55


Q ss_pred             CCCcHHHHHHHhhcccCCCCCCCCCCC
Q psy9184         487 EGDYQFDMYRMMRKQCQNNWQNFTPKN  513 (562)
Q Consensus       487 ~~~~q~dIy~lm~~~~~~~W~~~~P~t  513 (562)
                      .++.+.|+|+ +|..+...-.+..|+.
T Consensus       190 ~YdAKADLWS-iG~Ilyq~l~g~~Pf~  215 (429)
T KOG0595|consen  190 QYDAKADLWS-IGTILYQCLTGKPPFD  215 (429)
T ss_pred             cccchhhHHH-HHHHHHHHHhCCCCcc
Confidence            7888899976 5566656666777774

>KOG0615|consensus

Probab=100.00  E-value=1.1e-33  Score=291.74  Aligned_cols=240  Identities=18%  Similarity=0.224  Sum_probs=185.0

Q ss_pred             CCCceeeeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCccccc
Q psy9184         261 SALKNCKKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTEL  334 (562)
Q Consensus       261 ~~y~~~~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~l  334 (562)
                      +.|.+.+.||.|+||.|-+|      +.||||++.+........ .......+.+|++||++|+|               
T Consensus       172 d~yii~~~LGsGafg~Vkla~e~~tgk~vAiKIi~krk~~~~s~-~~~~~~~v~~EieILkkL~H---------------  235 (475)
T KOG0615|consen  172 DYYIISKTLGSGAFGLVKLAYEKKTGKQVAIKIINKRKSTGCSR-AIAKTRDVQNEIEILKKLSH---------------  235 (475)
T ss_pred             ceeEeeeeecCCceeEEEEEEEcccCcEEEeeeeehhhcccccc-cccchhhhHHHHHHHHhcCC---------------
Confidence            56789999999999999999      899999999865322111 11223457899999999999               


Q ss_pred             ccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc---cCCHHHHHHHHHHHHHHHHH
Q psy9184         335 LKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK---YRSPNQTYAMILQVVFSLAV  411 (562)
Q Consensus       335 ~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~---~l~e~~i~~I~~QIl~aL~y  411 (562)
                                 |+||+++++|..             ++..|+||||+.||++++.+.   .+.++..+.+++|++.|+.|
T Consensus       236 -----------P~IV~~~d~f~~-------------~ds~YmVlE~v~GGeLfd~vv~nk~l~ed~~K~~f~Qll~avkY  291 (475)
T KOG0615|consen  236 -----------PNIVRIKDFFEV-------------PDSSYMVLEYVEGGELFDKVVANKYLREDLGKLLFKQLLTAVKY  291 (475)
T ss_pred             -----------CCEEEEeeeeec-------------CCceEEEEEEecCccHHHHHHhccccccchhHHHHHHHHHHHHH
Confidence                       999999999986             457799999999999999885   48899999999999999999


Q ss_pred             HHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecC----CcEEEeecCCCccccCCC
Q psy9184         412 AEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVG----EKICYYDLSQDEELFEGE  487 (562)
Q Consensus       412 LH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~----~g~v~~~l~~~pelF~g~  487 (562)
                      ||+ +||+||||||+|||+..+..+                 +.+||+|||+|+....    ..-++|+.|.|||+..+.
T Consensus       292 LH~-~GI~HRDiKPeNILl~~~~e~-----------------~llKItDFGlAK~~g~~sfm~TlCGTpsYvAPEVl~~k  353 (475)
T KOG0615|consen  292 LHS-QGIIHRDIKPENILLSNDAED-----------------CLLKITDFGLAKVSGEGSFMKTLCGTPSYVAPEVLASK  353 (475)
T ss_pred             HHH-cCcccccCCcceEEeccCCcc-----------------eEEEecccchhhccccceehhhhcCCccccChhheecC
Confidence            999 799999999999999988532                 3799999999999865    345679999999999874


Q ss_pred             CC---c-HHHHHHHhhcccCCCCCCCCCCChhhhHHHHHHHHhhcccCCCCCCCchhHHHHHHHHHHHhcCCCcCcCC
Q psy9184         488 GD---Y-QFDMYRMMRKQCQNNWQNFTPKNNVFWIHYLVDKATCLKKGYQYLRAPRHQAFELLEELGQNALHFDSCYE  561 (562)
Q Consensus       488 ~~---~-q~dIy~lm~~~~~~~W~~~~P~tn~~wl~yl~~~Ll~~~~~~~~~~~~~~~~~~~l~~l~~~~l~~~s~~~  561 (562)
                      +.   . ..|||+ ||-.+.-..+++.||+...--.-+.+..+.  -+|.-....-.+.-++-..|++.||+-+...|
T Consensus       354 g~~~~~~kVDiWS-lGcvLfvcLsG~pPFS~~~~~~sl~eQI~~--G~y~f~p~~w~~Iseea~dlI~~mL~VdP~~R  428 (475)
T KOG0615|consen  354 GVEYYPSKVDIWS-LGCVLFVCLSGYPPFSEEYTDPSLKEQILK--GRYAFGPLQWDRISEEALDLINWMLVVDPENR  428 (475)
T ss_pred             Ceecccchheeee-ccceEEEEeccCCCcccccCCccHHHHHhc--CcccccChhhhhhhHHHHHHHHHhhEeCcccC
Confidence            32   2 368876 666677788899999776533323444444  23333322333445666778888887665543

>KOG0598|consensus

Probab=99.98  E-value=7.5e-33  Score=283.30  Aligned_cols=203  Identities=19%  Similarity=0.245  Sum_probs=174.8

Q ss_pred             CCCCCceeeeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCccc
Q psy9184         259 PSSALKNCKKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFT  332 (562)
Q Consensus       259 ~~~~y~~~~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv  332 (562)
                      ..++|+++++||+|+||+||.+      +.||+|++++..     ....+.......|..||..++|             
T Consensus        23 ~~~dF~~lkviGkG~fGkV~~Vrk~dt~kiYAmKvl~K~~-----iv~~~e~~~~~~Er~IL~~v~h-------------   84 (357)
T KOG0598|consen   23 GPDDFEILKVIGKGSFGKVFQVRKKDTGKIYAMKVLKKKK-----IVEKKEVRHTKAERNILSKIKH-------------   84 (357)
T ss_pred             ChhheeeeeeeeccCCceEEEEEEcccCceeehhhhhhhH-----hhhhhhHHHHHHHHHHHHhCCC-------------
Confidence            4478999999999999999999      899999999875     3344567889999999999998             


Q ss_pred             ccccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc---cCCHHHHHHHHHHHHHHH
Q psy9184         333 ELLKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK---YRSPNQTYAMILQVVFSL  409 (562)
Q Consensus       333 ~l~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~---~l~e~~i~~I~~QIl~aL  409 (562)
                                   |+||+++..|++             .+.+|+|+||+.||+|+.++.   .+++..++.++..|+.||
T Consensus        85 -------------PFiv~l~ysFQt-------------~~kLylVld~~~GGeLf~hL~~eg~F~E~~arfYlaEi~lAL  138 (357)
T KOG0598|consen   85 -------------PFIVKLIYSFQT-------------EEKLYLVLDYLNGGELFYHLQREGRFSEDRARFYLAEIVLAL  138 (357)
T ss_pred             -------------CcEeeeEEeccc-------------CCeEEEEEeccCCccHHHHHHhcCCcchhHHHHHHHHHHHHH
Confidence                         999999999997             569999999999999999997   599999999999999999


Q ss_pred             HHHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecC-----CcEEEeecCCCcccc
Q psy9184         410 AVAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVG-----EKICYYDLSQDEELF  484 (562)
Q Consensus       410 ~yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~-----~g~v~~~l~~~pelF  484 (562)
                      .|||+ .|||||||||+|||++..|                    +++|+|||||+....     ...++|.-|+|||++
T Consensus       139 ~~LH~-~gIiyRDlKPENILLd~~G--------------------Hi~LtDFgL~k~~~~~~~~t~tfcGT~eYmAPEil  197 (357)
T KOG0598|consen  139 GYLHS-KGIIYRDLKPENILLDEQG--------------------HIKLTDFGLCKEDLKDGDATRTFCGTPEYMAPEIL  197 (357)
T ss_pred             HHHHh-CCeeeccCCHHHeeecCCC--------------------cEEEeccccchhcccCCCccccccCCccccChHHH
Confidence            99999 6999999999999999998                    899999999996554     345778999999999


Q ss_pred             CCCCCcHHHHHHHhhcccCCCCCCCCCCChhhhHHHHHHHHhh
Q psy9184         485 EGEGDYQFDMYRMMRKQCQNNWQNFTPKNNVFWIHYLVDKATC  527 (562)
Q Consensus       485 ~g~~~~q~dIy~lm~~~~~~~W~~~~P~tn~~wl~yl~~~Ll~  527 (562)
                      .+.+.....-|+.+|...+++..+..|++... ..-..++.+.
T Consensus       198 ~~~gy~~~vDWWsLGillYeML~G~pPF~~~~-~~~~~~~I~~  239 (357)
T KOG0598|consen  198 LGKGYDKAVDWWSLGILLYEMLTGKPPFYAED-VKKMYDKILK  239 (357)
T ss_pred             hcCCCCcccchHhHHHHHHHHhhCCCCCcCcc-HHHHHHHHhc
Confidence            98755554556778888889999999997665 2333444454

>KOG0659|consensus

Probab=99.97  E-value=3.2e-32  Score=267.84  Aligned_cols=224  Identities=21%  Similarity=0.309  Sum_probs=181.3

Q ss_pred             CCCceeeeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCccccc
Q psy9184         261 SALKNCKKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTEL  334 (562)
Q Consensus       261 ~~y~~~~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~l  334 (562)
                      .+|...++||+|+||.||+|      +.||||.|+....      ....-...++||.+|+.++|               
T Consensus         2 ~rY~~~~~lGEG~~gvVyka~d~~t~~~VAIKKIkl~~~------kdGi~~talREIK~Lqel~h---------------   60 (318)
T KOG0659|consen    2 DRYEKLEKLGEGTYGVVYKARDTETGKRVAIKKIKLGNA------KDGINRTALREIKLLQELKH---------------   60 (318)
T ss_pred             chhhhhhhhcCcceEEEEEEEecCCCcEEEEEEeecccc------ccCccHHHHHHHHHHHHccC---------------
Confidence            46888999999999999999      8999999997631      11122457899999999999               


Q ss_pred             ccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc-----cCCHHHHHHHHHHHHHHH
Q psy9184         335 LKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK-----YRSPNQTYAMILQVVFSL  409 (562)
Q Consensus       335 ~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~-----~l~e~~i~~I~~QIl~aL  409 (562)
                                 +||+.+.++|-.             .+.+.||+||++  ++++.+.     .++..+++.++.|++.||
T Consensus        61 -----------~nIi~LiD~F~~-------------~~~l~lVfEfm~--tdLe~vIkd~~i~l~pa~iK~y~~m~LkGl  114 (318)
T KOG0659|consen   61 -----------PNIIELIDVFPH-------------KSNLSLVFEFMP--TDLEVVIKDKNIILSPADIKSYMLMTLKGL  114 (318)
T ss_pred             -----------cchhhhhhhccC-------------CCceEEEEEecc--ccHHHHhcccccccCHHHHHHHHHHHHHHH
Confidence                       999999999965             558999999996  6777664     389999999999999999


Q ss_pred             HHHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecC--------------------
Q psy9184         410 AVAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVG--------------------  469 (562)
Q Consensus       410 ~yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~--------------------  469 (562)
                      +|||+ ..|+||||||.|+||+.+|                    .+||+||||||.+..                    
T Consensus       115 ~y~H~-~~IlHRDlKPnNLLis~~g--------------------~lKiADFGLAr~f~~p~~~~~~~V~TRWYRAPELL  173 (318)
T KOG0659|consen  115 AYCHS-KWILHRDLKPNNLLISSDG--------------------QLKIADFGLARFFGSPNRIQTHQVVTRWYRAPELL  173 (318)
T ss_pred             HHHHh-hhhhcccCCccceEEcCCC--------------------cEEeecccchhccCCCCcccccceeeeeccChHHh
Confidence            99999 6999999999999999998                    799999999998763                    


Q ss_pred             --------------CcEEEeecCCCccccCCCCCcH--HHHHHHhhcccCCCCCCCCCCChhhhHHHHHHHHhhcccCCC
Q psy9184         470 --------------EKICYYDLSQDEELFEGEGDYQ--FDMYRMMRKQCQNNWQNFTPKNNVFWIHYLVDKATCLKKGYQ  533 (562)
Q Consensus       470 --------------~g~v~~~l~~~pelF~g~~~~q--~dIy~lm~~~~~~~W~~~~P~tn~~wl~yl~~~Ll~~~~~~~  533 (562)
                                    .||+++++..+-++|.|+.|.+  ..||+.+|+|...+|+......+..-+.       .  .+.+
T Consensus       174 fGsr~Yg~~VDmWavGCI~AELllr~P~fpG~sDidQL~~If~~LGTP~~~~WP~~~~lpdY~~~~-------~--~P~~  244 (318)
T KOG0659|consen  174 FGSRQYGTGVDMWAVGCIFAELLLRVPFFPGDSDIDQLSKIFRALGTPTPDQWPEMTSLPDYVKIQ-------Q--FPKP  244 (318)
T ss_pred             ccchhcCCcchhhhHHHHHHHHHccCCCCCCCchHHHHHHHHHHcCCCCcccCccccccccHHHHh-------c--CCCC
Confidence                          5788888888888889987766  8899999999999999998776654222       1  1222


Q ss_pred             CCCCchhHHHHHHHHHHHhcCCCcCcCC
Q psy9184         534 YLRAPRHQAFELLEELGQNALHFDSCYE  561 (562)
Q Consensus       534 ~~~~~~~~~~~~l~~l~~~~l~~~s~~~  561 (562)
                      +.+.-...+-....+|..+|++|+.+.|
T Consensus       245 ~~~~lf~aas~d~ldLl~~m~~ynP~~R  272 (318)
T KOG0659|consen  245 PLNNLFPAASSDALDLLSKMLTYNPKKR  272 (318)
T ss_pred             ccccccccccHHHHHHHHhhhccCchhc
Confidence            2222222234455778899999988765

>KOG0600|consensus

Probab=99.97  E-value=4.6e-32  Score=285.67  Aligned_cols=183  Identities=20%  Similarity=0.345  Sum_probs=156.5

Q ss_pred             CCCCceeeeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCcccc
Q psy9184         260 SSALKNCKKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTE  333 (562)
Q Consensus       260 ~~~y~~~~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~  333 (562)
                      .+.|+.+++||+|+||.||+|      +.||+|.|....      +......-..+||.||++|+|              
T Consensus       116 ~~~feki~kIGeGTyg~VYkAr~~~tgkivALKKvr~d~------~~~~~~~t~~REI~ILr~l~H--------------  175 (560)
T KOG0600|consen  116 ADSFEKIEKIGEGTYGQVYKARDLETGKIVALKKVRFDN------EKEGFPITAIREIKILRRLDH--------------  175 (560)
T ss_pred             hHHHHHHHHhcCcchhheeEeeecccCcEEEEEEeeccc------CCCcchHHHHHHHHHHHhcCC--------------
Confidence            367899999999999999999      899999999874      223344556899999999999              


Q ss_pred             cccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCcccc----ccCCHHHHHHHHHHHHHHH
Q psy9184         334 LLKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDI----KYRSPNQTYAMILQVVFSL  409 (562)
Q Consensus       334 l~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l----~~l~e~~i~~I~~QIl~aL  409 (562)
                                  |||++|.+...++.           ...+|+|+|||++ +|.-.+    ..|++.+++.++.||+.||
T Consensus       176 ------------pNIikL~eivt~~~-----------~~siYlVFeYMdh-DL~GLl~~p~vkft~~qIKc~mkQLl~Gl  231 (560)
T KOG0600|consen  176 ------------PNIIKLEEIVTSKL-----------SGSIYLVFEYMDH-DLSGLLSSPGVKFTEPQIKCYMKQLLEGL  231 (560)
T ss_pred             ------------CcccceeeEEEecC-----------CceEEEEEecccc-hhhhhhcCCCcccChHHHHHHHHHHHHHH
Confidence                        99999988877631           4589999999984 233222    2599999999999999999


Q ss_pred             HHHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecC--------------------
Q psy9184         410 AVAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVG--------------------  469 (562)
Q Consensus       410 ~yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~--------------------  469 (562)
                      +|||. .||+|||||.+||||+.+|                    .+||+|||||+++..                    
T Consensus       232 ~~cH~-~gvlHRDIK~SNiLidn~G--------------------~LKiaDFGLAr~y~~~~~~~~T~rVvTLWYRpPEL  290 (560)
T KOG0600|consen  232 EYCHS-RGVLHRDIKGSNILIDNNG--------------------VLKIADFGLARFYTPSGSAPYTSRVVTLWYRPPEL  290 (560)
T ss_pred             HHHhh-cCeeeccccccceEEcCCC--------------------CEEeccccceeeccCCCCcccccceEEeeccChHH
Confidence            99999 7999999999999999998                    799999999997654                    


Q ss_pred             ---------------CcEEEeecCCCccccCCCCCcH--HHHHHHhhcccCCCCC
Q psy9184         470 ---------------EKICYYDLSQDEELFEGEGDYQ--FDMYRMMRKQCQNNWQ  507 (562)
Q Consensus       470 ---------------~g~v~~~l~~~pelF~g~~~~q--~dIy~lm~~~~~~~W~  507 (562)
                                     .||+++++|.+.++|+|..+..  -.||.++|.+....|.
T Consensus       291 LLG~t~Yg~aVDlWS~GCIl~El~~gkPI~~G~tEveQl~kIfklcGSP~e~~W~  345 (560)
T KOG0600|consen  291 LLGATSYGTAVDLWSVGCILAELFLGKPILQGRTEVEQLHKIFKLCGSPTEDYWP  345 (560)
T ss_pred             hcCCcccccceeehhhhHHHHHHHcCCCCcCCccHHHHHHHHHHHhCCCChhccc
Confidence                           6899999999999999976544  8899999999999997

>KOG0581|consensus

Probab=99.97  E-value=7.1e-32  Score=276.27  Aligned_cols=176  Identities=21%  Similarity=0.276  Sum_probs=153.2

Q ss_pred             CCCceeeeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCccccc
Q psy9184         261 SALKNCKKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTEL  334 (562)
Q Consensus       261 ~~y~~~~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~l  334 (562)
                      ++++.++.||+|+.|+||+|      +.+|+|.|....       +....+++.+|++|+++++|               
T Consensus        79 ~dle~~~~lG~G~gG~V~kv~Hk~t~~i~AlK~I~~~~-------~~~~~~Qi~rEl~il~~~~s---------------  136 (364)
T KOG0581|consen   79 SDLERLGVLGSGNGGTVYKVRHKPTGKIYALKVILLNI-------DPALQKQILRELEILRSCQS---------------  136 (364)
T ss_pred             HHhhhhhhcccCCCcEEEEEEEcCCCeEEEEEeecccC-------CHHHHHHHHHHHHHHhhCCC---------------
Confidence            46778899999999999999      899999996543       45666899999999999988               


Q ss_pred             ccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCC-eEEEEEEecCCCCCccccc---cCCHHHHHHHHHHHHHHHH
Q psy9184         335 LKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEED-QIFIILELKNGGNDSGDIK---YRSPNQTYAMILQVVFSLA  410 (562)
Q Consensus       335 ~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~-~l~LVmE~~~gG~ll~~l~---~l~e~~i~~I~~QIl~aL~  410 (562)
                                 |+||.+|+.|..             ++ .++|+||||+||++-..+.   .++|.....|+.||+.||.
T Consensus       137 -----------pyIV~~ygaF~~-------------~~~~isI~mEYMDgGSLd~~~k~~g~i~E~~L~~ia~~VL~GL~  192 (364)
T KOG0581|consen  137 -----------PYIVGFYGAFYS-------------NGEEISICMEYMDGGSLDDILKRVGRIPEPVLGKIARAVLRGLS  192 (364)
T ss_pred             -----------CCeeeEeEEEEe-------------CCceEEeehhhcCCCCHHHHHhhcCCCCHHHHHHHHHHHHHHHH
Confidence                       999999999986             44 6999999999997655444   4999999999999999999


Q ss_pred             HHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecC---CcEEEeecCCCccccCC-
Q psy9184         411 VAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVG---EKICYYDLSQDEELFEG-  486 (562)
Q Consensus       411 yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~---~g~v~~~l~~~pelF~g-  486 (562)
                      |||+.++||||||||+|||++..|                    .|||||||.|+.+..   .+.++|-.||+||-+.| 
T Consensus       193 YLh~~~~IIHRDIKPsNlLvNskG--------------------eVKicDFGVS~~lvnS~a~tfvGT~~YMsPERi~g~  252 (364)
T KOG0581|consen  193 YLHEERKIIHRDIKPSNLLVNSKG--------------------EVKICDFGVSGILVNSIANTFVGTSAYMSPERISGE  252 (364)
T ss_pred             HHhhccCeeeccCCHHHeeeccCC--------------------CEEeccccccHHhhhhhcccccccccccChhhhcCC
Confidence            999768999999999999999998                    799999999998765   55678899999999998 


Q ss_pred             CCCcHHHHHHHhhccc
Q psy9184         487 EGDYQFDMYRMMRKQC  502 (562)
Q Consensus       487 ~~~~q~dIy~lm~~~~  502 (562)
                      .+..+.|||++.-..+
T Consensus       253 ~Ys~~sDIWSLGLsll  268 (364)
T KOG0581|consen  253 SYSVKSDIWSLGLSLL  268 (364)
T ss_pred             cCCcccceecccHHHH
Confidence            5778899998755444

>KOG0616|consensus

Probab=99.97  E-value=3.1e-31  Score=264.26  Aligned_cols=217  Identities=18%  Similarity=0.249  Sum_probs=189.2

Q ss_pred             CCCCCceeeeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCccc
Q psy9184         259 PSSALKNCKKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFT  332 (562)
Q Consensus       259 ~~~~y~~~~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv  332 (562)
                      .-++|+.++.||.|+||.|.++      ..+|+|++.+..     ....+..++..+|..+|+.+.|             
T Consensus        42 ~l~dfe~~~tlGtGSFGrV~LVr~k~~g~yYAmKvL~k~~-----vVklKQveH~~nEk~vL~~v~~-------------  103 (355)
T KOG0616|consen   42 SLQDFERLKTLGTGSFGRVHLVREKHSGNYYAMKVLDKQK-----VVKLKQVEHTHNEKRVLKAVSH-------------  103 (355)
T ss_pred             chhhhhheeeeccCccceEEEEEEccCCceeehhhcCHHH-----HHHHHHHHHHhhHHHHHhhccC-------------
Confidence            4478999999999999999999      899999999875     5667888999999999999998             


Q ss_pred             ccccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc---cCCHHHHHHHHHHHHHHH
Q psy9184         333 ELLKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK---YRSPNQTYAMILQVVFSL  409 (562)
Q Consensus       333 ~l~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~---~l~e~~i~~I~~QIl~aL  409 (562)
                                   |++++++..|.+             .+.+|+||||.+||.++..+.   ++++..++.++.||+.||
T Consensus       104 -------------PFlv~l~~t~~d-------------~~~lymvmeyv~GGElFS~Lrk~~rF~e~~arFYAAeivlAl  157 (355)
T KOG0616|consen  104 -------------PFLVKLYGTFKD-------------NSNLYMVMEYVPGGELFSYLRKSGRFSEPHARFYAAEIVLAL  157 (355)
T ss_pred             -------------ceeEEEEEeecc-------------CCeEEEEEeccCCccHHHHHHhcCCCCchhHHHHHHHHHHHH
Confidence                         999999999986             669999999999999988775   599999999999999999


Q ss_pred             HHHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecCC--cEEEeecCCCccccCCC
Q psy9184         410 AVAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVGE--KICYYDLSQDEELFEGE  487 (562)
Q Consensus       410 ~yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~~--g~v~~~l~~~pelF~g~  487 (562)
                      +|||+ ++|++||||||||||+.+|                    ++||+|||+|+...+.  ..++++-|.+||+....
T Consensus       158 eylH~-~~iiYRDLKPENiLlD~~G--------------------~iKitDFGFAK~v~~rT~TlCGTPeYLAPEii~sk  216 (355)
T KOG0616|consen  158 EYLHS-LDIIYRDLKPENLLLDQNG--------------------HIKITDFGFAKRVSGRTWTLCGTPEYLAPEIIQSK  216 (355)
T ss_pred             HHHHh-cCeeeccCChHHeeeccCC--------------------cEEEEeccceEEecCcEEEecCCccccChHHhhcC
Confidence            99999 8999999999999999998                    8999999999998774  34568999999999998


Q ss_pred             CCcHHHHHHHhhcccCCCCCCCCCCChhhhHHHHHHHHhhcccCCCCCCCchhH
Q psy9184         488 GDYQFDMYRMMRKQCQNNWQNFTPKNNVFWIHYLVDKATCLKKGYQYLRAPRHQ  541 (562)
Q Consensus       488 ~~~q~dIy~lm~~~~~~~W~~~~P~tn~~wl~yl~~~Ll~~~~~~~~~~~~~~~  541 (562)
                      +...+.-|+.+|...+++-.++.|+-+..-+ -+.++.+.....|++--....+
T Consensus       217 ~ynkavDWWalGVLIYEMlaG~pPF~~~~~~-~iY~KI~~~~v~fP~~fs~~~k  269 (355)
T KOG0616|consen  217 GYNKAVDWWALGVLIYEMLAGYPPFYDDNPI-QIYEKILEGKVKFPSYFSSDAK  269 (355)
T ss_pred             CCCcchhHHHHHHHHHHHHcCCCCCcCCChH-HHHHHHHhCcccCCcccCHHHH
Confidence            7777677888999999999999999655433 3456666658888887765444

>KOG0661|consensus

Probab=99.97  E-value=4.3e-32  Score=284.18  Aligned_cols=224  Identities=18%  Similarity=0.256  Sum_probs=173.2

Q ss_pred             CCCCceeeeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCcccc
Q psy9184         260 SSALKNCKKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTE  333 (562)
Q Consensus       260 ~~~y~~~~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~  333 (562)
                      .++|.++++||.|+||.||+|      +.||||.++..-..      -.. -.-+||+..|++|+.              
T Consensus         9 m~RY~~i~klGDGTfGsV~la~~~~~~~~VAIK~MK~Kf~s------~ee-~~nLREvksL~kln~--------------   67 (538)
T KOG0661|consen    9 MDRYTVIRKLGDGTFGSVYLAKSKETGELVAIKKMKKKFYS------WEE-CMNLREVKSLRKLNP--------------   67 (538)
T ss_pred             HHHHHHHHHhcCCcceeEEEeeecCCCceeeHHHHHhhhcc------HHH-HHHHHHHHHHHhcCC--------------
Confidence            378999999999999999999      89999999876411      111 123789999999993              


Q ss_pred             cccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc----cCCHHHHHHHHHHHHHHH
Q psy9184         334 LLKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK----YRSPNQTYAMILQVVFSL  409 (562)
Q Consensus       334 l~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~----~l~e~~i~~I~~QIl~aL  409 (562)
                                 |||||++++++.+            .+..+|+|||||+. .+++.++    .|++..++.|+.||+.||
T Consensus        68 -----------hpniikL~Evi~d------------~~~~L~fVfE~Md~-NLYqLmK~R~r~fse~~irnim~QilqGL  123 (538)
T KOG0661|consen   68 -----------HPNIIKLKEVIRD------------NDRILYFVFEFMDC-NLYQLMKDRNRLFSESDIRNIMYQILQGL  123 (538)
T ss_pred             -----------CCcchhhHHHhhc------------cCceEeeeHHhhhh-hHHHHHhhcCCcCCHHHHHHHHHHHHHHH
Confidence                       3999999999987            23489999999973 3544443    399999999999999999


Q ss_pred             HHHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecC--------------------
Q psy9184         410 AVAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVG--------------------  469 (562)
Q Consensus       410 ~yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~--------------------  469 (562)
                      +|+|. +|+.||||||||||+....                    .+||+||||||....                    
T Consensus       124 ~hiHk-~GfFHRDlKPENiLi~~~~--------------------~iKiaDFGLARev~SkpPYTeYVSTRWYRAPEvLL  182 (538)
T KOG0661|consen  124 AHIHK-HGFFHRDLKPENILISGND--------------------VIKIADFGLAREVRSKPPYTEYVSTRWYRAPEVLL  182 (538)
T ss_pred             HHHHh-cCcccccCChhheEecccc--------------------eeEecccccccccccCCCcchhhhcccccchHHhh
Confidence            99999 8999999999999999654                    799999999998764                    


Q ss_pred             -------------CcEEEeecCCCccccCCCCCcH--HHHHHHhhcccCCCCCCCCCCChhhhHHHHHHHHhhcccCCCC
Q psy9184         470 -------------EKICYYDLSQDEELFEGEGDYQ--FDMYRMMRKQCQNNWQNFTPKNNVFWIHYLVDKATCLKKGYQY  534 (562)
Q Consensus       470 -------------~g~v~~~l~~~pelF~g~~~~q--~dIy~lm~~~~~~~W~~~~P~tn~~wl~yl~~~Ll~~~~~~~~  534 (562)
                                   .||+++++|+-.++|.|..+..  +.|...+|+|....|..=         .-+...|--   .|+.
T Consensus       183 rs~~Ys~pvD~wA~GcI~aEl~sLrPLFPG~sE~Dqi~KIc~VLGtP~~~~~~eg---------~~La~~mnf---~~P~  250 (538)
T KOG0661|consen  183 RSGYYSSPVDMWAVGCIMAELYSLRPLFPGASEIDQIYKICEVLGTPDKDSWPEG---------YNLASAMNF---RFPQ  250 (538)
T ss_pred             hccccCCchHHHHHHHHHHHHHHhcccCCCCcHHHHHHHHHHHhCCCccccchhH---------HHHHHHhcc---CCCc
Confidence                         6899999999999999987765  888889999998877542         112222221   2222


Q ss_pred             CCCchhH-----HHHHHHHHHHhcCCCcCcCC
Q psy9184         535 LRAPRHQ-----AFELLEELGQNALHFDSCYE  561 (562)
Q Consensus       535 ~~~~~~~-----~~~~l~~l~~~~l~~~s~~~  561 (562)
                      .....-+     +....-+|+..||.|+.+.|
T Consensus       251 ~~~~~l~~L~p~~s~~~~~li~~ll~WDP~kR  282 (538)
T KOG0661|consen  251 VKPSPLKDLLPNASSEAASLIERLLAWDPDKR  282 (538)
T ss_pred             CCCCChHHhCcccCHHHHHHHHHHhcCCCccC
Confidence            1111111     14455667888999998875

>KOG0593|consensus

Probab=99.97  E-value=4.8e-31  Score=263.38  Aligned_cols=170  Identities=22%  Similarity=0.343  Sum_probs=145.1

Q ss_pred             CCCceeeeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCccccc
Q psy9184         261 SALKNCKKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTEL  334 (562)
Q Consensus       261 ~~y~~~~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~l  334 (562)
                      ++|+.+.++|+|+||.||+|      +.||||.+..+      ++++.-.+-.++|+++|+.|+|               
T Consensus         2 ekYE~LgkvGEGSYGvV~KCrnk~TgqIVAIKkF~Es------edd~~VkKIAlREIrmLKqLkH---------------   60 (396)
T KOG0593|consen    2 EKYEKLGKVGEGSYGVVMKCRNKDTGQIVAIKKFVES------EDDPVVKKIALREIRMLKQLKH---------------   60 (396)
T ss_pred             cHHhhhhccccCcceEEEEeccCCcccEEEEEeeccC------CccHHHHHHHHHHHHHHHhccc---------------
Confidence            56889999999999999999      99999998765      3344555667999999999999               


Q ss_pred             ccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCcccccc----CCHHHHHHHHHHHHHHHH
Q psy9184         335 LKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIKY----RSPNQTYAMILQVVFSLA  410 (562)
Q Consensus       335 ~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~~----l~e~~i~~I~~QIl~aL~  410 (562)
                                 +|+|.+.++|..             ...++||+|||+. +.++.+..    ++.+.+..+++|++.|+.
T Consensus        61 -----------~NLVnLiEVFrr-------------krklhLVFE~~dh-TvL~eLe~~p~G~~~~~vk~~l~Q~l~ai~  115 (396)
T KOG0593|consen   61 -----------ENLVNLIEVFRR-------------KRKLHLVFEYCDH-TVLHELERYPNGVPSELVKKYLYQLLKAIH  115 (396)
T ss_pred             -----------chHHHHHHHHHh-------------cceeEEEeeecch-HHHHHHHhccCCCCHHHHHHHHHHHHHHhh
Confidence                       999999999986             4589999999984 46666653    789999999999999999


Q ss_pred             HHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecCCcEEE-----eecCCCccccC
Q psy9184         411 VAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVGEKICY-----YDLSQDEELFE  485 (562)
Q Consensus       411 yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~~g~v~-----~~l~~~pelF~  485 (562)
                      |+|+ +++||||||||||||+.++                    .+||||||+||.+...|..|     |.+|.+||+.-
T Consensus       116 ~cHk-~n~IHRDIKPENILit~~g--------------------vvKLCDFGFAR~L~~pgd~YTDYVATRWYRaPELLv  174 (396)
T KOG0593|consen  116 FCHK-NNCIHRDIKPENILITQNG--------------------VVKLCDFGFARTLSAPGDNYTDYVATRWYRAPELLV  174 (396)
T ss_pred             hhhh-cCeecccCChhheEEecCC--------------------cEEeccchhhHhhcCCcchhhhhhhhhhccChhhhc
Confidence            9999 7999999999999999998                    89999999999988655554     55688899888


Q ss_pred             CCCCc--HHHHHHH
Q psy9184         486 GEGDY--QFDMYRM  497 (562)
Q Consensus       486 g~~~~--q~dIy~l  497 (562)
                      |+..|  ..|||.+
T Consensus       175 GDtqYG~pVDiWAi  188 (396)
T KOG0593|consen  175 GDTQYGKPVDIWAI  188 (396)
T ss_pred             ccCcCCCcccchhh
Confidence            85433  3788765

>KOG0663|consensus

Probab=99.97  E-value=7.5e-32  Score=272.11  Aligned_cols=230  Identities=20%  Similarity=0.312  Sum_probs=177.8

Q ss_pred             CCCCceeeeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCcccc
Q psy9184         260 SSALKNCKKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTE  333 (562)
Q Consensus       260 ~~~y~~~~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~  333 (562)
                      -+.|+.+++|++|+||.||+|      +.||+|.++.+..  .++.+    --.++||.+|.++.|              
T Consensus        75 v~efe~lnrI~EGtyGiVYRakdk~t~eIVALKr~kmeke--k~GFP----ItsLREIniLl~~~H--------------  134 (419)
T KOG0663|consen   75 VEEFEKLNRIEEGTYGVVYRAKDKKTDEIVALKRLKMEKE--KEGFP----ITSLREINILLKARH--------------  134 (419)
T ss_pred             HHHHHHHhhcccCcceeEEEeccCCcceeEEeeecccccc--cCCCc----chhHHHHHHHHhcCC--------------
Confidence            367899999999999999999      8999999998641  11222    234799999999998              


Q ss_pred             cccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCC---ccccc-cCCHHHHHHHHHHHHHHH
Q psy9184         334 LLKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGND---SGDIK-YRSPNQTYAMILQVVFSL  409 (562)
Q Consensus       334 l~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~l---l~~l~-~l~e~~i~~I~~QIl~aL  409 (562)
                                  ||||.+-++..-..           -+.+|||||||++ ++   ++.+. .|...+++.++.|++.||
T Consensus       135 ------------~NIV~vkEVVvG~~-----------~d~iy~VMe~~Eh-DLksl~d~m~q~F~~~evK~L~~QlL~gl  190 (419)
T KOG0663|consen  135 ------------PNIVEVKEVVVGSN-----------MDKIYIVMEYVEH-DLKSLMETMKQPFLPGEVKTLMLQLLRGL  190 (419)
T ss_pred             ------------CCeeeeEEEEeccc-----------cceeeeeHHHHHh-hHHHHHHhccCCCchHHHHHHHHHHHHHH
Confidence                        88888887765322           4569999999974 23   23333 588999999999999999


Q ss_pred             HHHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecC--------------------
Q psy9184         410 AVAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVG--------------------  469 (562)
Q Consensus       410 ~yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~--------------------  469 (562)
                      +|||. ..|+||||||+|+|+...|                    .+||+||||||.+..                    
T Consensus       191 k~lH~-~wilHRDLK~SNLLm~~~G--------------------~lKiaDFGLAR~ygsp~k~~T~lVVTLWYRaPELL  249 (419)
T KOG0663|consen  191 KHLHD-NWILHRDLKTSNLLLSHKG--------------------ILKIADFGLAREYGSPLKPYTPLVVTLWYRAPELL  249 (419)
T ss_pred             HHHhh-ceeEecccchhheeeccCC--------------------cEEecccchhhhhcCCcccCcceEEEeeecCHHHh
Confidence            99999 7999999999999999998                    799999999998765                    


Q ss_pred             --------------CcEEEeecCCCccccCCCCCcH--HHHHHHhhcccCCCCCCCCCCChhhhHHHHHHHHhhcccCCC
Q psy9184         470 --------------EKICYYDLSQDEELFEGEGDYQ--FDMYRMMRKQCQNNWQNFTPKNNVFWIHYLVDKATCLKKGYQ  533 (562)
Q Consensus       470 --------------~g~v~~~l~~~pelF~g~~~~q--~dIy~lm~~~~~~~W~~~~P~tn~~wl~yl~~~Ll~~~~~~~  533 (562)
                                    .||++.++.+..++|.|.++..  ..||++||+|....|+++.-...+--+.+.       ..+|.
T Consensus       250 LG~~tyst~iDMWSvGCI~aE~l~~kPlf~G~sE~dQl~~If~llGtPte~iwpg~~~lp~~k~~~f~-------~~pyn  322 (419)
T KOG0663|consen  250 LGAKTYSTAVDMWSVGCIFAELLTQKPLFPGKSEIDQLDKIFKLLGTPSEAIWPGYSELPAVKKMTFS-------EHPYN  322 (419)
T ss_pred             cCCcccCcchhhhhHHHHHHHHHhcCCCCCCCchHHHHHHHHHHhCCCccccCCCccccchhhccccC-------CCCch
Confidence                          5888899999999999987665  889999999999999999765443211111       12222


Q ss_pred             CCCCchhHH--HHHHHHHHHhcCCCcCcCC
Q psy9184         534 YLRAPRHQA--FELLEELGQNALHFDSCYE  561 (562)
Q Consensus       534 ~~~~~~~~~--~~~l~~l~~~~l~~~s~~~  561 (562)
                      +.+.+.+..  -+.--.|.+.+|+|+.+.|
T Consensus       323 ~lr~kF~~~~lse~g~~Lln~llt~dP~kR  352 (419)
T KOG0663|consen  323 NLRKKFGALSLSEQGFDLLNKLLTYDPGKR  352 (419)
T ss_pred             hhhhhccccccchhHHHHHHHHhccCcccc
Confidence            222222111  1445567899999998876

>KOG0605|consensus

Probab=99.97  E-value=5.5e-31  Score=279.55  Aligned_cols=189  Identities=18%  Similarity=0.252  Sum_probs=162.8

Q ss_pred             CCCCCceeeeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCccc
Q psy9184         259 PSSALKNCKKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFT  332 (562)
Q Consensus       259 ~~~~y~~~~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv  332 (562)
                      .-++|++++.||+|+||+||+|      ..+|+|+++++.     ......+..++.|-.||...++             
T Consensus       139 ~~~DFe~Lk~IgkGAfGeVrLarKk~Tg~iyAmK~LkKS~-----M~~~~Qv~hV~aERdiL~~~ds-------------  200 (550)
T KOG0605|consen  139 SLDDFELLKVIGKGAFGEVRLARKKDTGEIYAMKILKKSE-----MLKKNQVEHVRAERDILAEVDS-------------  200 (550)
T ss_pred             CcccchhheeeccccceeEEEEEEccCCcEEeeecccHHH-----HHhhhhHHHHHHHHHHhhhcCC-------------
Confidence            4478999999999999999999      899999999875     4456677899999999999777             


Q ss_pred             ccccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc---cCCHHHHHHHHHHHHHHH
Q psy9184         333 ELLKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK---YRSPNQTYAMILQVVFSL  409 (562)
Q Consensus       333 ~l~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~---~l~e~~i~~I~~QIl~aL  409 (562)
                                   |+||++|..|++             .+.+||||||++||+....+.   .|+++.++.++.+++.|+
T Consensus       201 -------------~~vVKLyYsFQD-------------~~~LYLiMEylPGGD~mTLL~~~~~L~e~~arfYiaE~vlAI  254 (550)
T KOG0605|consen  201 -------------PWVVKLYYSFQD-------------KEYLYLIMEYLPGGDMMTLLMRKDTLTEDWARFYIAETVLAI  254 (550)
T ss_pred             -------------CcEEEEEEEecC-------------CCeeEEEEEecCCccHHHHHHhcCcCchHHHHHHHHHHHHHH
Confidence                         999999999997             559999999999997766665   399999999999999999


Q ss_pred             HHHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecC--------------------
Q psy9184         410 AVAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVG--------------------  469 (562)
Q Consensus       410 ~yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~--------------------  469 (562)
                      .-+|+ +|+|||||||+|+||+..|                    ++||+|||||..+..                    
T Consensus       255 ~~iH~-~gyIHRDIKPdNlLiD~~G--------------------HiKLSDFGLs~gl~~~~~~~~~~~~~~~~~~~~~~  313 (550)
T KOG0605|consen  255 ESIHQ-LGYIHRDIKPDNLLIDAKG--------------------HIKLSDFGLSTGLDKKHRIESYRLDEQMQINLSEA  313 (550)
T ss_pred             HHHHH-cCcccccCChhheeecCCC--------------------CEeeccccccchhhhhhhhhhhcchhhhhhhhccC
Confidence            99999 8999999999999999998                    899999999954321                    


Q ss_pred             --------------------------------CcEEEeecCCCccccCCCC-CcHHHHHHHhhcccCCCCCCCCCCC
Q psy9184         470 --------------------------------EKICYYDLSQDEELFEGEG-DYQFDMYRMMRKQCQNNWQNFTPKN  513 (562)
Q Consensus       470 --------------------------------~g~v~~~l~~~pelF~g~~-~~q~dIy~lm~~~~~~~W~~~~P~t  513 (562)
                                                      ...++++-|+|||+|.|.+ +..+|.|+ +|....++.-++.||.
T Consensus       314 ~~~~~~~~~~~~~~~~~~~~~~~w~~nrr~~a~StVGTPDYiAPEVll~kgY~~~cDwWS-LG~ImyEmLvGyPPF~  389 (550)
T KOG0605|consen  314 KPSDFPKFNTPRSTMSRREQLQTWKRNRRQLAYSTVGTPDYIAPEVLLGKGYGKECDWWS-LGCIMYEMLVGYPPFC  389 (550)
T ss_pred             CCccccccccccchhhHHHHHHHHHhhhhhhhhcccCCccccchHHHhcCCCCccccHHH-HHHHHHHHHhCCCCCC
Confidence                                            3567899999999999976 44477655 6666667777888884

>KOG0592|consensus

Probab=99.97  E-value=8.9e-31  Score=277.91  Aligned_cols=228  Identities=18%  Similarity=0.170  Sum_probs=183.6

Q ss_pred             CCCCCceeeeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCccc
Q psy9184         259 PSSALKNCKKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFT  332 (562)
Q Consensus       259 ~~~~y~~~~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv  332 (562)
                      ...+|..++.||+|+|++|++|      +.||||++.+..     ...++...-+.+|-.+|..|++             
T Consensus        71 ~~~DF~Fg~~lGeGSYStV~~A~~~~t~keYAiKVl~K~~-----Iike~KvkYV~~Ek~~l~~L~~-------------  132 (604)
T KOG0592|consen   71 TPNDFKFGKILGEGSYSTVVLAREKATGKEYAIKVLDKRY-----IIKEKKVKYVTREKEALTQLSG-------------  132 (604)
T ss_pred             ChhhcchhheeccccceeEEEeeecCCCceeeHhhhhHHH-----HHhhcccchhhHHHHHHHHhhC-------------
Confidence            4478999999999999999999      899999999875     4455666778899999999976             


Q ss_pred             ccccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCcccccc---CCHHHHHHHHHHHHHHH
Q psy9184         333 ELLKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIKY---RSPNQTYAMILQVVFSL  409 (562)
Q Consensus       333 ~l~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~~---l~e~~i~~I~~QIl~aL  409 (562)
                                  ||.|++||-.|++             +..+|+||||+++|++++.+.+   |++..++.++.||+.||
T Consensus       133 ------------hPgivkLy~TFQD-------------~~sLYFvLe~A~nGdll~~i~K~Gsfde~caR~YAAeIldAl  187 (604)
T KOG0592|consen  133 ------------HPGIVKLYFTFQD-------------EESLYFVLEYAPNGDLLDLIKKYGSFDETCARFYAAEILDAL  187 (604)
T ss_pred             ------------CCCeEEEEEEeec-------------ccceEEEEEecCCCcHHHHHHHhCcchHHHHHHHHHHHHHHH
Confidence                        6999999999997             5689999999999999998864   89999999999999999


Q ss_pred             HHHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecC------------------Cc
Q psy9184         410 AVAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVG------------------EK  471 (562)
Q Consensus       410 ~yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~------------------~g  471 (562)
                      +|||+ +|||||||||||||++.++                    +++|+|||.|+.+.+                  ..
T Consensus       188 eylH~-~GIIHRDlKPENILLd~dm--------------------hikITDFGsAK~l~~~~~~~~~~~~~~~a~s~~~S  246 (604)
T KOG0592|consen  188 EYLHS-NGIIHRDLKPENILLDKDG--------------------HIKITDFGSAKILSPSQKSQENPVDPNQASSRRSS  246 (604)
T ss_pred             HHHHh-cCceeccCChhheeEcCCC--------------------cEEEeeccccccCChhhccccCccCcccccCcccc
Confidence            99999 8999999999999999998                    899999999998765                  22


Q ss_pred             EEEeecCCCccccCC-CCCcHHHHHHHhhcccCCCCCCCCCCChhhhHHHHHHHHhhcccCCCCCCCchhHHHHHHHHHH
Q psy9184         472 ICYYDLSQDEELFEG-EGDYQFDMYRMMRKQCQNNWQNFTPKNNVFWIHYLVDKATCLKKGYQYLRAPRHQAFELLEELG  550 (562)
Q Consensus       472 ~v~~~l~~~pelF~g-~~~~q~dIy~lm~~~~~~~W~~~~P~tn~~wl~yl~~~Ll~~~~~~~~~~~~~~~~~~~l~~l~  550 (562)
                      -++|-.|..||++.. ..++.+|||. +|-.++.+..+..||-...-. -+-++.+.....|+..-..      ....|.
T Consensus       247 FVGTAeYVSPElL~~~~~~~~sDiWA-lGCilyQmlaG~PPFra~Ney-liFqkI~~l~y~fp~~fp~------~a~dLv  318 (604)
T KOG0592|consen  247 FVGTAEYVSPELLNDSPAGPSSDLWA-LGCILYQMLAGQPPFRAANEY-LIFQKIQALDYEFPEGFPE------DARDLI  318 (604)
T ss_pred             eeeeecccCHHHhcCCCCCcccchHH-HHHHHHHHhcCCCCCccccHH-HHHHHHHHhcccCCCCCCH------HHHHHH
Confidence            577889999998877 4567799976 444555667777787433211 1234555556677777653      445556


Q ss_pred             HhcCCCcC
Q psy9184         551 QNALHFDS  558 (562)
Q Consensus       551 ~~~l~~~s  558 (562)
                      ++||.-+.
T Consensus       319 ~KLLv~dp  326 (604)
T KOG0592|consen  319 KKLLVRDP  326 (604)
T ss_pred             HHHHccCc
Confidence            66665443

>KOG0583|consensus

Probab=99.97  E-value=3.4e-30  Score=273.51  Aligned_cols=233  Identities=20%  Similarity=0.205  Sum_probs=178.9

Q ss_pred             CCCCceeeeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCcccc
Q psy9184         260 SSALKNCKKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTE  333 (562)
Q Consensus       260 ~~~y~~~~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~  333 (562)
                      .++|.+.+.||+|+||.|++|      ..||+|++.......  .. ....+.+.+|+.+++.+.+              
T Consensus        16 ~g~y~~~~~lG~GsfgkV~~a~~~~t~~~vAiKii~~~~~~~--~~-~~~~~~i~rEi~~~~~~~~--------------   78 (370)
T KOG0583|consen   16 IGKYELGRTLGSGSFGKVKLAKHRLTGEKVAIKIIDRKKVSS--KS-QKLDELIKREISILRRLRS--------------   78 (370)
T ss_pred             cCceeeeeeecCCCCeeEEEeeeccCCCeEEEEEechhcccc--cc-cccchhhHHHHHHHHHhcc--------------
Confidence            478999999999999999999      899999887752110  11 1233566689999999995              


Q ss_pred             cccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc---cCCHHHHHHHHHHHHHHHH
Q psy9184         334 LLKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK---YRSPNQTYAMILQVVFSLA  410 (562)
Q Consensus       334 l~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~---~l~e~~i~~I~~QIl~aL~  410 (562)
                                 ||||+++++++..             ...+|+|||||.||++++.+.   ++.|.+++.+|+||+.|++
T Consensus        79 -----------HpnI~~l~ev~~t-------------~~~~~ivmEy~~gGdL~~~i~~~g~l~E~~ar~~F~Qlisav~  134 (370)
T KOG0583|consen   79 -----------HPNIIRLLEVFAT-------------PTKIYIVMEYCSGGDLFDYIVNKGRLKEDEARKYFRQLISAVA  134 (370)
T ss_pred             -----------CCCEeEEEEEEec-------------CCeEEEEEEecCCccHHHHHHHcCCCChHHHHHHHHHHHHHHH
Confidence                       5999999999986             457999999999999999885   4899999999999999999


Q ss_pred             HHHhhCCeEeccCCCCCEEEccC-CCCCcccccCCcccccccCCceEEEEeccceeeec-C----CcEEEeecCCCcccc
Q psy9184         411 VAEVELEFEHRDLHMSNILVLQT-DQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFV-G----EKICYYDLSQDEELF  484 (562)
Q Consensus       411 yLH~~~~IiHRDLKpeNILl~~~-~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~-~----~g~v~~~l~~~pelF  484 (562)
                      |||+ +||+||||||+|||++.+ +                    .+||+|||+|.... .    ...++++.|++||+|
T Consensus       135 y~H~-~gi~HRDLK~ENilld~~~~--------------------~~Kl~DFG~s~~~~~~~~~l~t~cGsp~Y~aPEvl  193 (370)
T KOG0583|consen  135 YCHS-RGIVHRDLKPENILLDGNEG--------------------NLKLSDFGLSAISPGEDGLLKTFCGSPAYAAPEVL  193 (370)
T ss_pred             HHHh-CCEeeCCCCHHHEEecCCCC--------------------CEEEeccccccccCCCCCcccCCCCCcccCCHHHh
Confidence            9999 799999999999999998 5                    79999999999872 2    456789999999999


Q ss_pred             CCCCCc---HHHHHHHhhcccCCCCCCCCCCChhhhHHHHHHHHhhcccCCCCCCCchhHHHHHHHHHHHhcCCCcCcCC
Q psy9184         485 EGEGDY---QFDMYRMMRKQCQNNWQNFTPKNNVFWIHYLVDKATCLKKGYQYLRAPRHQAFELLEELGQNALHFDSCYE  561 (562)
Q Consensus       485 ~g~~~~---q~dIy~lm~~~~~~~W~~~~P~tn~~wl~yl~~~Ll~~~~~~~~~~~~~~~~~~~l~~l~~~~l~~~s~~~  561 (562)
                      .+...|   ..|||+ +|..+..+-.+..||.+.. ..-+..+.......++..-.     -..+..|.++||..+...|
T Consensus       194 ~~~~~Y~g~~aDvWS-~GViLy~ml~G~~PF~d~~-~~~l~~ki~~~~~~~p~~~~-----S~~~~~Li~~mL~~~P~~R  266 (370)
T KOG0583|consen  194 SGKGTYSGKAADVWS-LGVILYVLLCGRLPFDDSN-VPNLYRKIRKGEFKIPSYLL-----SPEARSLIEKMLVPDPSTR  266 (370)
T ss_pred             CCCCCcCCchhhhhh-hHHHHHHHHhCCCCCCCcc-HHHHHHHHhcCCccCCCCcC-----CHHHHHHHHHHcCCCcccC
Confidence            996633   389976 5666666667777775432 22223333331233333221     2256667788887776654

>KOG0575|consensus

Probab=99.96  E-value=9.5e-30  Score=273.73  Aligned_cols=172  Identities=19%  Similarity=0.354  Sum_probs=153.1

Q ss_pred             CCCceeeeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCccccc
Q psy9184         261 SALKNCKKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTEL  334 (562)
Q Consensus       261 ~~y~~~~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~l  334 (562)
                      .+|...+.||+|||+.||.+      +.||+|+|++..     .......+.+.+||+|.+.|+|               
T Consensus        18 ~~Y~~g~~LGkGgFA~cYe~~~~~tge~~A~KvVpk~~-----l~k~~~reKv~~EIeIHr~L~H---------------   77 (592)
T KOG0575|consen   18 KRYKRGRFLGKGGFARCYEARDLDTGEVVAVKVVPKKL-----LKKPKQREKVLNEIEIHRSLKH---------------   77 (592)
T ss_pred             ceeeeeeeeccCcceEEEEEEEcCCCcEEEEEEeehHH-----hcCcchHHHHHHHHHHHHhcCC---------------
Confidence            56999999999999999999      899999999864     3345667899999999999999               


Q ss_pred             ccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc---cCCHHHHHHHHHHHHHHHHH
Q psy9184         335 LKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK---YRSPNQTYAMILQVVFSLAV  411 (562)
Q Consensus       335 ~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~---~l~e~~i~~I~~QIl~aL~y  411 (562)
                                 ||||+++++|++             .+.+|||+|+|..|++.+.++   .++|.+++.+++||+.||.|
T Consensus        78 -----------pnIV~f~~~FED-------------s~nVYivLELC~~~sL~el~Krrk~ltEpEary~l~QIv~GlkY  133 (592)
T KOG0575|consen   78 -----------PNIVQFYHFFED-------------SNNVYIVLELCHRGSLMELLKRRKPLTEPEARYFLRQIVEGLKY  133 (592)
T ss_pred             -----------CcEEeeeeEeec-------------CCceEEEEEecCCccHHHHHHhcCCCCcHHHHHHHHHHHHHHHH
Confidence                       999999999997             559999999999998877775   39999999999999999999


Q ss_pred             HHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecC-----CcEEEeecCCCccccCC
Q psy9184         412 AEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVG-----EKICYYDLSQDEELFEG  486 (562)
Q Consensus       412 LH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~-----~g~v~~~l~~~pelF~g  486 (562)
                      ||+ ++|||||||.+|++++.+-                    +|||+|||||.....     ...++|+-|.+||+...
T Consensus       134 LH~-~~IiHRDLKLGNlfL~~~~--------------------~VKIgDFGLAt~le~~~Erk~TlCGTPNYIAPEVl~k  192 (592)
T KOG0575|consen  134 LHS-LGIIHRDLKLGNLFLNENM--------------------NVKIGDFGLATQLEYDGERKKTLCGTPNYIAPEVLNK  192 (592)
T ss_pred             HHh-cCceecccchhheeecCcC--------------------cEEecccceeeeecCcccccceecCCCcccChhHhcc
Confidence            999 7999999999999999995                    799999999999874     35678999999998877


Q ss_pred             CC-CcHHHHHHH
Q psy9184         487 EG-DYQFDMYRM  497 (562)
Q Consensus       487 ~~-~~q~dIy~l  497 (562)
                      .+ ....|||++
T Consensus       193 ~gHsfEvDiWSl  204 (592)
T KOG0575|consen  193 SGHSFEVDIWSL  204 (592)
T ss_pred             CCCCCchhhhhh
Confidence            54 445899875

>KOG0591|consensus

Probab=99.96  E-value=9.8e-31  Score=259.00  Aligned_cols=173  Identities=21%  Similarity=0.333  Sum_probs=149.0

Q ss_pred             CCCceeeeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCccccc
Q psy9184         261 SALKNCKKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTEL  334 (562)
Q Consensus       261 ~~y~~~~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~l  334 (562)
                      .+|++.++||+|+||+||++      ..+|.|.|...      .-+.+..+++..|+.+|+.|+|               
T Consensus        19 ~~y~Il~~IG~GsFg~vykv~~~~~g~l~a~K~i~f~------~md~k~rq~~v~Ei~lLkQL~H---------------   77 (375)
T KOG0591|consen   19 ADYQILKKIGRGSFGEVYKVQCLLDGKLVALKKIQFG------MMDAKARQDCVKEISLLKQLNH---------------   77 (375)
T ss_pred             HHHHHHHHHcCCcchheEEeeeccCcchhhhhhcchh------hccHHHHHHHHHHHHHHHhcCC---------------
Confidence            56899999999999999999      89999999854      3456778899999999999999               


Q ss_pred             ccccccCCCCCCCceeehh-hhhccccCCCCCCCCCCCCe-EEEEEEecCCCCCccccc-------cCCHHHHHHHHHHH
Q psy9184         335 LKCSCVRGRYPDRLVTLWE-EFAKTKKSYNDHPSMFEEDQ-IFIILELKNGGNDSGDIK-------YRSPNQTYAMILQV  405 (562)
Q Consensus       335 ~~~~iv~g~~~pnIv~l~~-~f~~~~~s~~~~p~~~~~~~-l~LVmE~~~gG~ll~~l~-------~l~e~~i~~I~~QI  405 (562)
                                 ||||++|. .|..             +.+ ++||||||.+|++..-++       .+++..+|.++.|+
T Consensus        78 -----------pNIVqYy~~~f~~-------------~~evlnivmE~c~~GDLsqmIk~~K~qkr~ipE~~Vwk~f~QL  133 (375)
T KOG0591|consen   78 -----------PNIVQYYAHSFIE-------------DNEVLNIVMELCDAGDLSQMIKHFKKQKRLIPEKTVWKYFVQL  133 (375)
T ss_pred             -----------chHHHHHHHhhhc-------------cchhhHHHHHhhcccCHHHHHHHHHhccccCchHHHHHHHHHH
Confidence                       99999998 5554             334 999999999997755543       38999999999999


Q ss_pred             HHHHHHHHh--hCC-eEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecC-----CcEEEeec
Q psy9184         406 VFSLAVAEV--ELE-FEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVG-----EKICYYDL  477 (562)
Q Consensus       406 l~aL~yLH~--~~~-IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~-----~g~v~~~l  477 (562)
                      +.||.++|.  ..| |+||||||.||+|+.+|                    .|||+||||+|.+..     ..-++|+.
T Consensus       134 ~~AL~~cH~~~~r~~VmHRDIKPaNIFl~~~g--------------------vvKLGDfGL~r~l~s~~tfA~S~VGTPy  193 (375)
T KOG0591|consen  134 CRALYHCHSKIPRGTVMHRDIKPANIFLTANG--------------------VVKLGDFGLGRFLSSKTTFAHSLVGTPY  193 (375)
T ss_pred             HHHHHHHhccccccceeeccCcchheEEcCCC--------------------ceeeccchhHhHhcchhHHHHhhcCCCc
Confidence            999999998  322 89999999999999998                    799999999998875     45688999


Q ss_pred             CCCccccCC-CCCcHHHHHHHh
Q psy9184         478 SQDEELFEG-EGDYQFDMYRMM  498 (562)
Q Consensus       478 ~~~pelF~g-~~~~q~dIy~lm  498 (562)
                      ||.||+..+ .++..+|||++.
T Consensus       194 YMSPE~i~~~~Y~~kSDiWslG  215 (375)
T KOG0591|consen  194 YMSPERIHESGYNFKSDIWSLG  215 (375)
T ss_pred             ccCHHHHhcCCCCcchhHHHHH
Confidence            999998887 467779998753

>KOG0594|consensus

Probab=99.96  E-value=8.4e-30  Score=260.32  Aligned_cols=230  Identities=18%  Similarity=0.288  Sum_probs=172.5

Q ss_pred             CCCceeeeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCccccc
Q psy9184         261 SALKNCKKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTEL  334 (562)
Q Consensus       261 ~~y~~~~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~l  334 (562)
                      ..|+.+++||+|+||+||+|      +.||+|.+......      +.......+|+.++++|+|               
T Consensus        11 ~~~~~~eklGeGtyg~Vykar~~~~g~~VALKkirl~~~~------EG~P~taiREisllk~L~~---------------   69 (323)
T KOG0594|consen   11 FDYEKVEKLGEGTYGVVYKARSKRTGKFVALKKIRLEFEE------EGVPSTAIREISLLKRLSH---------------   69 (323)
T ss_pred             HHHHHHHHhCCCCceEEEEEEEecCCCEEEEEEEeccccc------cCCCchhhHHHHHHHHhCC---------------
Confidence            45778899999999999999      79999999987521      1122356899999999999               


Q ss_pred             ccccccCCCCCCC-ceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCcccc-c-------cCCHHHHHHHHHHH
Q psy9184         335 LKCSCVRGRYPDR-LVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDI-K-------YRSPNQTYAMILQV  405 (562)
Q Consensus       335 ~~~~iv~g~~~pn-Iv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l-~-------~l~e~~i~~I~~QI  405 (562)
                                 +| |+.+++++.+...       ......+++|+||++  .++..+ .       .++...++.+++||
T Consensus        70 -----------~~~iv~L~dv~~~~~~-------~~~~~~l~lvfe~~d--~DL~~ymd~~~~~~~g~~~~~ik~~m~Ql  129 (323)
T KOG0594|consen   70 -----------ANHIVRLHDVIHTSNN-------HRGIGKLYLVFEFLD--RDLKKYMDSLPKKPQGLPPRLIKSFMRQL  129 (323)
T ss_pred             -----------CcceEEEEeeeeeccc-------ccccceEEEEEEeec--ccHHHHHHhccccccCCCHHHHHHHHHHH
Confidence                       66 9999999876321       122448999999996  333332 2       25567899999999


Q ss_pred             HHHHHHHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecC----------------
Q psy9184         406 VFSLAVAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVG----------------  469 (562)
Q Consensus       406 l~aL~yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~----------------  469 (562)
                      +.||+|||+ ++|+||||||+||||+..|                    .+||+|||+|+...-                
T Consensus       130 l~gl~~~H~-~~IlHRDLKPQNlLi~~~G--------------------~lKlaDFGlAra~~ip~~~yt~evvTlWYRa  188 (323)
T KOG0594|consen  130 LRGLAFLHS-HGILHRDLKPQNLLISSSG--------------------VLKLADFGLARAFSIPMRTYTPEVVTLWYRA  188 (323)
T ss_pred             HHHHHHHHh-CCeecccCCcceEEECCCC--------------------cEeeeccchHHHhcCCcccccccEEEeeccC
Confidence            999999999 8999999999999999987                    799999999986551                


Q ss_pred             ------------------CcEEEeecCCCccccCCCCCcH--HHHHHHhhcccCCCCCCCCCCChhhhHHHHHHHHhhcc
Q psy9184         470 ------------------EKICYYDLSQDEELFEGEGDYQ--FDMYRMMRKQCQNNWQNFTPKNNVFWIHYLVDKATCLK  529 (562)
Q Consensus       470 ------------------~g~v~~~l~~~pelF~g~~~~q--~dIy~lm~~~~~~~W~~~~P~tn~~wl~yl~~~Ll~~~  529 (562)
                                        .||++++++...++|.|..+..  ..||+++|+|....|++.....+.-.       ...  
T Consensus       189 PEvLlGs~~Ys~~vDiWs~GcIfaEm~~~~~LFpG~se~~ql~~If~~lGtP~e~~Wp~v~~~~~~k~-------~f~--  259 (323)
T KOG0594|consen  189 PEVLLGSTSYSTSVDIWSLGCIFAEMFTRRPLFPGDSEIDQLFRIFRLLGTPNEKDWPGVSSLPDYKA-------PFP--  259 (323)
T ss_pred             HHHhcCCCcCCCCcchHhHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHcCCCCccCCCCccccccccc-------cCc--
Confidence                              5788888888899999977665  89999999999999998865533320       000  


Q ss_pred             cCCCCCCCchhHH---HHHHHHHHHhcCCCcCcCCC
Q psy9184         530 KGYQYLRAPRHQA---FELLEELGQNALHFDSCYEM  562 (562)
Q Consensus       530 ~~~~~~~~~~~~~---~~~l~~l~~~~l~~~s~~~~  562 (562)
                       .++.++.-....   .....++..++|+|+.+.++
T Consensus       260 -~~~~~~~l~~~~~~~~~~~~dll~~~L~y~p~~R~  294 (323)
T KOG0594|consen  260 -KWPGPKDLSSILPKLDPDGIELLSKLLQYDPAKRI  294 (323)
T ss_pred             -CCCCccchHHhccccCccHHHHHHHHhccCcccCc
Confidence             111111111111   23566778888888877653

>KOG0597|consensus

Probab=99.96  E-value=3.4e-29  Score=266.01  Aligned_cols=225  Identities=20%  Similarity=0.222  Sum_probs=180.1

Q ss_pred             CCCceeeeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCccccc
Q psy9184         261 SALKNCKKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTEL  334 (562)
Q Consensus       261 ~~y~~~~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~l  334 (562)
                      ++|.+.+.||+|+||.||+|      +.||+|.+.+.+      -..+.++.+.+|++|+++|+|               
T Consensus         2 e~yhv~e~iG~Gsfg~VYKgrrK~t~~~vAik~i~K~g------r~~k~l~~l~~ev~i~r~lkH---------------   60 (808)
T KOG0597|consen    2 EQYHVYEMIGEGSFGRVYKGRRKYTIQVVAIKFIDKSG------RNEKELKNLRQEVRILRSLKH---------------   60 (808)
T ss_pred             cchhHHHHhcCCccceeeecccccceeEEEEEEehhcC------CchHHHHHHHHHHHHHHhcCC---------------
Confidence            46888999999999999999      899999999874      356777889999999999999               


Q ss_pred             ccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc---cCCHHHHHHHHHHHHHHHHH
Q psy9184         335 LKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK---YRSPNQTYAMILQVVFSLAV  411 (562)
Q Consensus       335 ~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~---~l~e~~i~~I~~QIl~aL~y  411 (562)
                                 ||||.++++|++             ..++|+|.|||.| ++...+.   .++|+.++.|..|++.||.|
T Consensus        61 -----------pniv~m~esfEt-------------~~~~~vVte~a~g-~L~~il~~d~~lpEe~v~~~a~~LVsaL~y  115 (808)
T KOG0597|consen   61 -----------PNIVEMLESFET-------------SAHLWVVTEYAVG-DLFTILEQDGKLPEEQVRAIAYDLVSALYY  115 (808)
T ss_pred             -----------cchhhHHHhhcc-------------cceEEEEehhhhh-hHHHHHHhccCCCHHHHHHHHHHHHHHHHH
Confidence                       999999999986             5699999999986 5655553   49999999999999999999


Q ss_pred             HHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecCCcEE-----EeecCCCccccCC
Q psy9184         412 AEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVGEKIC-----YYDLSQDEELFEG  486 (562)
Q Consensus       412 LH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~~g~v-----~~~l~~~pelF~g  486 (562)
                      ||+ ++|+|||+||.|||+...+                    .+|+||||+||.......+     ++++||+||+..+
T Consensus       116 Lhs-~rilhrd~kPqniLl~~~~--------------------~~KlcdFg~Ar~m~~~t~vltsikGtPlYmAPElv~e  174 (808)
T KOG0597|consen  116 LHS-NRILHRDMKPQNILLEKGG--------------------TLKLCDFGLARAMSTNTSVLTSIKGTPLYMAPELVEE  174 (808)
T ss_pred             HHh-cCcccccCCcceeeecCCC--------------------ceeechhhhhhhcccCceeeeeccCcccccCHHHHcC
Confidence            999 7999999999999999987                    7999999999988764433     5899999999987


Q ss_pred             -CCCcHHHHHHHhhcccCCCCCCCCCCChhhhHHHHHHHHhhcccCCCCCCCchhHHHHHHHHHHHhcCCCcCcC
Q psy9184         487 -EGDYQFDMYRMMRKQCQNNWQNFTPKNNVFWIHYLVDKATCLKKGYQYLRAPRHQAFELLEELGQNALHFDSCY  560 (562)
Q Consensus       487 -~~~~q~dIy~lm~~~~~~~W~~~~P~tn~~wl~yl~~~Ll~~~~~~~~~~~~~~~~~~~l~~l~~~~l~~~s~~  560 (562)
                       .++...|+|+ +|-.+++.+.+-.||-..- +.-+++..+.--+++++      ..-..+..|.+.+|.=+.+.
T Consensus       175 ~pyd~~sDlWs-lGcilYE~~~G~PPF~a~s-i~~Lv~~I~~d~v~~p~------~~S~~f~nfl~gLL~kdP~~  241 (808)
T KOG0597|consen  175 QPYDHTSDLWS-LGCILYELYVGQPPFYARS-ITQLVKSILKDPVKPPS------TASSSFVNFLQGLLIKDPAQ  241 (808)
T ss_pred             CCccchhhHHH-HHHHHHHHhcCCCCchHHH-HHHHHHHHhcCCCCCcc------cccHHHHHHHHHHhhcChhh
Confidence             4566699976 5566668888888885444 33344444431333333      22335666777777655443

>KOG0032|consensus

Probab=99.95  E-value=3e-28  Score=259.20  Aligned_cols=238  Identities=17%  Similarity=0.248  Sum_probs=185.0

Q ss_pred             CCCceeeeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCccccc
Q psy9184         261 SALKNCKKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTEL  334 (562)
Q Consensus       261 ~~y~~~~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~l  334 (562)
                      ..|++.+.||.|.||.||+|      +.+|+|++++...     ......+.+.+|+.||+++..               
T Consensus        35 ~~Y~l~~~lG~G~Fg~v~~~~~~~tg~~~A~K~i~k~~~-----~~~~~~~~v~~Ev~il~~l~~---------------   94 (382)
T KOG0032|consen   35 EKYELGRELGRGQFGVVYLCREKSTGKEVACKVIPKRKL-----RGKEDREDVRREVAILQQLSG---------------   94 (382)
T ss_pred             ccEEehhhhCCCCceEEEEEEecCCCceeEEEEeehhhc-----cccccHHHHHHHHHHHHhccC---------------
Confidence            57899999999999999999      7899999998652     122255788999999999994               


Q ss_pred             ccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCcccccc--CCHHHHHHHHHHHHHHHHHH
Q psy9184         335 LKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIKY--RSPNQTYAMILQVVFSLAVA  412 (562)
Q Consensus       335 ~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~~--l~e~~i~~I~~QIl~aL~yL  412 (562)
                                |||||.+++.|++             ...+|+|||+|.||++++.+..  +++.++..+++||+.|+.||
T Consensus        95 ----------hpniv~l~~~~e~-------------~~~~~lvmEL~~GGeLfd~i~~~~~sE~da~~~~~~il~av~~l  151 (382)
T KOG0032|consen   95 ----------HPNIVQLKDAFED-------------PDSVYLVMELCEGGELFDRIVKKHYSERDAAGIIRQILEAVKYL  151 (382)
T ss_pred             ----------CCCEEEEEEEEEc-------------CCeEEEEEEecCCchHHHHHHHccCCHHHHHHHHHHHHHHHHHH
Confidence                      4999999999987             5589999999999999998875  89999999999999999999


Q ss_pred             HhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecC----CcEEEeecCCCccccCC-C
Q psy9184         413 EVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVG----EKICYYDLSQDEELFEG-E  487 (562)
Q Consensus       413 H~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~----~g~v~~~l~~~pelF~g-~  487 (562)
                      |+ +||+||||||+|+|+.......                ..+|++|||+|.....    .++++++.|++||+..+ .
T Consensus       152 H~-~gvvHrDlKpEN~L~~~~~~~~----------------~~ik~~DFGla~~~~~~~~~~~~~Gtp~y~APEvl~~~~  214 (382)
T KOG0032|consen  152 HS-LGVVHRDLKPENLLLASKDEGS----------------GRIKLIDFGLAKFIKPGERLHTIVGTPEYVAPEVLGGRP  214 (382)
T ss_pred             Hh-CCceeccCCHHHeeeccccCCC----------------CcEEEeeCCCceEccCCceEeeecCCccccCchhhcCCC
Confidence            99 8999999999999998875311                2699999999998876    45678999999999885 6


Q ss_pred             CCcHHHHHHHhhcccCCCCCCCCCCChhhhHHHHHHHHhhcccCCCCCCCchhHHHHHHHHHHHhcCCCcCcCCC
Q psy9184         488 GDYQFDMYRMMRKQCQNNWQNFTPKNNVFWIHYLVDKATCLKKGYQYLRAPRHQAFELLEELGQNALHFDSCYEM  562 (562)
Q Consensus       488 ~~~q~dIy~lm~~~~~~~W~~~~P~tn~~wl~yl~~~Ll~~~~~~~~~~~~~~~~~~~l~~l~~~~l~~~s~~~~  562 (562)
                      +....|+|++... ++..-.++.|+...-+..-...-+.. ...|...  .-...-...+.|++.+|.++...|+
T Consensus       215 y~~~~DiWS~Gvi-~yiLL~G~~PF~~~~~~~~~~~i~~~-~~~f~~~--~w~~is~~akd~i~~ll~~dp~~R~  285 (382)
T KOG0032|consen  215 YGDEVDVWSIGVI-LYILLSGVPPFWGETEFEIFLAILRG-DFDFTSE--PWDDISESAKDFIRKLLEFDPRKRL  285 (382)
T ss_pred             CCcccchhHHHHH-HHHHhhCCCCCcCCChhHHHHHHHcC-CCCCCCC--CccccCHHHHHHHHHhcccCcccCC
Confidence            6777999885443 33445666676433322222222222 2223322  2222366788889999998877664

>KOG0578|consensus

Probab=99.95  E-value=4e-28  Score=259.41  Aligned_cols=229  Identities=18%  Similarity=0.220  Sum_probs=182.6

Q ss_pred             CCCCCceeeeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCccc
Q psy9184         259 PSSALKNCKKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFT  332 (562)
Q Consensus       259 ~~~~y~~~~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv  332 (562)
                      +...|....+||+|+-|.||.|      +.||||++.+..        +...+-+++|+.+|+..+|             
T Consensus       271 P~~~y~~~~kigqgaSG~vy~A~~~~~~~~VaiK~m~l~~--------Q~~keLilnEi~Vm~~~~H-------------  329 (550)
T KOG0578|consen  271 PRSKYTDFKKIGQGATGGVYVARKISTKQEVAIKRMDLRK--------QPKKELLLNEILVMRDLHH-------------  329 (550)
T ss_pred             hhhhhcchhhhccccccceeeeeeccCCceEEEEEEEecc--------CCchhhhHHHHHHHHhccc-------------
Confidence            3355788899999999999999      899999999864        4445678999999999998             


Q ss_pred             ccccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc--cCCHHHHHHHHHHHHHHHH
Q psy9184         333 ELLKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK--YRSPNQTYAMILQVVFSLA  410 (562)
Q Consensus       333 ~l~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~--~l~e~~i~~I~~QIl~aL~  410 (562)
                                   +|||++++.|..             .+.+|+||||++||++.+.+.  .++|.++..|+++++.||+
T Consensus       330 -------------~NiVnfl~Sylv-------------~deLWVVMEym~ggsLTDvVt~~~~~E~qIA~Icre~l~aL~  383 (550)
T KOG0578|consen  330 -------------PNIVNFLDSYLV-------------GDELWVVMEYMEGGSLTDVVTKTRMTEGQIAAICREILQGLK  383 (550)
T ss_pred             -------------hHHHHHHHHhcc-------------cceeEEEEeecCCCchhhhhhcccccHHHHHHHHHHHHHHHH
Confidence                         999999999875             568999999999999777665  3899999999999999999


Q ss_pred             HHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecC-----CcEEEeecCCCccccC
Q psy9184         411 VAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVG-----EKICYYDLSQDEELFE  485 (562)
Q Consensus       411 yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~-----~g~v~~~l~~~pelF~  485 (562)
                      |||. .||+|||||.+|||+..++                    .+||+|||+|..+..     ...+++++||+||+..
T Consensus       384 fLH~-~gIiHrDIKSDnILL~~~g--------------------~vKltDFGFcaqi~~~~~KR~TmVGTPYWMAPEVvt  442 (550)
T KOG0578|consen  384 FLHA-RGIIHRDIKSDNILLTMDG--------------------SVKLTDFGFCAQISEEQSKRSTMVGTPYWMAPEVVT  442 (550)
T ss_pred             HHHh-cceeeeccccceeEeccCC--------------------cEEEeeeeeeeccccccCccccccCCCCccchhhhh
Confidence            9999 7999999999999999998                    699999999998875     4578899999999988


Q ss_pred             C-CCCcHHHHHHHhhcccCCCCCCCCCCChhhhHHHHHHHHhhcccCCCCCCCchhHHHHHHHHHHHhcCCCcCcC
Q psy9184         486 G-EGDYQFDMYRMMRKQCQNNWQNFTPKNNVFWIHYLVDKATCLKKGYQYLRAPRHQAFELLEELGQNALHFDSCY  560 (562)
Q Consensus       486 g-~~~~q~dIy~lm~~~~~~~W~~~~P~tn~~wl~yl~~~Ll~~~~~~~~~~~~~~~~~~~l~~l~~~~l~~~s~~  560 (562)
                      - .+....|||++. ...-++..+-.|+-|---|..+  +|+..  .-+..-...++.-..|++|.+.+|+.+...
T Consensus       443 rk~YG~KVDIWSLG-IMaIEMveGEPPYlnE~PlrAl--yLIa~--ng~P~lk~~~klS~~~kdFL~~cL~~dv~~  513 (550)
T KOG0578|consen  443 RKPYGPKVDIWSLG-IMAIEMVEGEPPYLNENPLRAL--YLIAT--NGTPKLKNPEKLSPELKDFLDRCLVVDVEQ  513 (550)
T ss_pred             hcccCccccchhhh-hHHHHHhcCCCCccCCChHHHH--HHHhh--cCCCCcCCccccCHHHHHHHHHHhhcchhc
Confidence            7 577889998854 3333666777787554334333  34431  111222223344667888889999877543

>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases

Probab=99.95  E-value=7.2e-28  Score=245.97  Aligned_cols=228  Identities=18%  Similarity=0.199  Sum_probs=170.4

Q ss_pred             CCCceeeeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCccccc
Q psy9184         261 SALKNCKKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTEL  334 (562)
Q Consensus       261 ~~y~~~~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~l  334 (562)
                      ++|++.+.||+|+||.||+|      +.||+|++....     ....+..+.+.+|+.+++.++|               
T Consensus         1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~-----~~~~~~~~~~~~E~~~l~~l~h---------------   60 (291)
T cd05612           1 DDLERIKTVGTGTFGRVHLVRDRISEHYYALKVMAIPE-----VIRLKQEQHVHNEKRVLKEVSH---------------   60 (291)
T ss_pred             CCceeeeeeecCCCeEEEEEEEcCCCCEEEEEEEEHHH-----HhhhHHHHHHHHHHHHHHhCCC---------------
Confidence            36889999999999999999      789999998642     1223345678899999999998               


Q ss_pred             ccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc---cCCHHHHHHHHHHHHHHHHH
Q psy9184         335 LKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK---YRSPNQTYAMILQVVFSLAV  411 (562)
Q Consensus       335 ~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~---~l~e~~i~~I~~QIl~aL~y  411 (562)
                                 |||+++++.+.+             ++.+|+||||+.+|++.+.+.   .+++..+..++.||+.||+|
T Consensus        61 -----------p~iv~~~~~~~~-------------~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~  116 (291)
T cd05612          61 -----------PFIIRLFWTEHD-------------QRFLYMLMEYVPGGELFSYLRNSGRFSNSTGLFYASEIVCALEY  116 (291)
T ss_pred             -----------CcHhhhHhhhcc-------------CCeEEEEEeCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHH
Confidence                       999999988875             558999999999998876653   48899999999999999999


Q ss_pred             HHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecCC--cEEEeecCCCccccCCC-C
Q psy9184         412 AEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVGE--KICYYDLSQDEELFEGE-G  488 (562)
Q Consensus       412 LH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~~--g~v~~~l~~~pelF~g~-~  488 (562)
                      ||+ .||+||||||+|||++.++                    .+||+|||+++.....  ...++..|++||++.+. .
T Consensus       117 lH~-~~i~H~dlkp~NIli~~~~--------------------~~kl~Dfg~~~~~~~~~~~~~gt~~y~aPE~~~~~~~  175 (291)
T cd05612         117 LHS-KEIVYRDLKPENILLDKEG--------------------HIKLTDFGFAKKLRDRTWTLCGTPEYLAPEVIQSKGH  175 (291)
T ss_pred             HHH-CCeeecCCCHHHeEECCCC--------------------CEEEEecCcchhccCCcccccCChhhcCHHHHcCCCC
Confidence            999 7999999999999998876                    7999999999876542  23456788999998874 4


Q ss_pred             CcHHHHHHHhhcccCCCCCCCCCCChhhhHHHHHHHHhhcccCCCCCCCchhHHHHHHHHHHHhcCCCcCcCC
Q psy9184         489 DYQFDMYRMMRKQCQNNWQNFTPKNNVFWIHYLVDKATCLKKGYQYLRAPRHQAFELLEELGQNALHFDSCYE  561 (562)
Q Consensus       489 ~~q~dIy~lm~~~~~~~W~~~~P~tn~~wl~yl~~~Ll~~~~~~~~~~~~~~~~~~~l~~l~~~~l~~~s~~~  561 (562)
                      +.+.|||++. ......+.+..|+...... -+.+........++...      -..+.+|.++||.++...|
T Consensus       176 ~~~~DiwSlG-~il~~l~~g~~pf~~~~~~-~~~~~i~~~~~~~~~~~------~~~~~~li~~~l~~dp~~R  240 (291)
T cd05612         176 NKAVDWWALG-ILIYEMLVGYPPFFDDNPF-GIYEKILAGKLEFPRHL------DLYAKDLIKKLLVVDRTRR  240 (291)
T ss_pred             CchhhHHHHH-HHHHHHHhCCCCCCCCCHH-HHHHHHHhCCcCCCccC------CHHHHHHHHHHcCCCHHHc
Confidence            5568998863 3333445555565433211 12233333122333222      2356677888888776554

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt

>KOG0611|consensus

Probab=99.95  E-value=1.3e-28  Score=253.02  Aligned_cols=163  Identities=23%  Similarity=0.393  Sum_probs=147.8

Q ss_pred             CCCceeeeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCccccc
Q psy9184         261 SALKNCKKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTEL  334 (562)
Q Consensus       261 ~~y~~~~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~l  334 (562)
                      .+|++.+.||+|+||.|-+|      +.||||.|++..     ..+...+-.+.+||+||..|+|               
T Consensus        53 HRyE~~etLGkGTYGKVk~A~e~~sgR~VAiKsIrKdk-----IkdeqDlvhIRREIeIMSsLNH---------------  112 (668)
T KOG0611|consen   53 HRYEITETLGKGTYGKVKLAYEHKSGREVAIKSIRKDK-----IKDEQDLVHIRREIEIMSSLNH---------------  112 (668)
T ss_pred             hHHHHHHHhcCCcccceeehhhccCCcEeehhhhhhhh-----cccHHHHHHHHHHHHHHhhcCC---------------
Confidence            57899999999999999999      899999999876     4456667789999999999999               


Q ss_pred             ccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc---cCCHHHHHHHHHHHHHHHHH
Q psy9184         335 LKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK---YRSPNQTYAMILQVVFSLAV  411 (562)
Q Consensus       335 ~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~---~l~e~~i~~I~~QIl~aL~y  411 (562)
                                 |||+.+|++|++             .+.+.|||||..+|++++++.   .+++.+++.+|+||+.|+.|
T Consensus       113 -----------PhII~IyEVFEN-------------kdKIvivMEYaS~GeLYDYiSer~~LsErEaRhfFRQIvSAVhY  168 (668)
T KOG0611|consen  113 -----------PHIIQIYEVFEN-------------KDKIVIVMEYASGGELYDYISERGSLSEREARHFFRQIVSAVHY  168 (668)
T ss_pred             -----------CceeehhhhhcC-------------CceEEEEEEecCCccHHHHHHHhccccHHHHHHHHHHHHHHHHH
Confidence                       999999999986             568999999999999999885   49999999999999999999


Q ss_pred             HHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecC----CcEEEeecCCCccccCCC
Q psy9184         412 AEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVG----EKICYYDLSQDEELFEGE  487 (562)
Q Consensus       412 LH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~----~g~v~~~l~~~pelF~g~  487 (562)
                      +|. ++++|||||.+|||++.++                    .+||+||||+-.+.+    ...++.++|..||+..|+
T Consensus       169 CHk-nrVvHRDLKLENILLD~N~--------------------NiKIADFGLSNly~~~kfLqTFCGSPLYASPEIvNG~  227 (668)
T KOG0611|consen  169 CHK-NRVVHRDLKLENILLDQNN--------------------NIKIADFGLSNLYADKKFLQTFCGSPLYASPEIVNGT  227 (668)
T ss_pred             Hhh-ccceecccchhheeecCCC--------------------CeeeeccchhhhhccccHHHHhcCCcccCCccccCCC
Confidence            999 7999999999999999998                    799999999987765    345678999999999986


Q ss_pred             C
Q psy9184         488 G  488 (562)
Q Consensus       488 ~  488 (562)
                      .
T Consensus       228 P  228 (668)
T KOG0611|consen  228 P  228 (668)
T ss_pred             C
Confidence            4

>KOG0694|consensus

Probab=99.95  E-value=1.4e-27  Score=259.65  Aligned_cols=192  Identities=17%  Similarity=0.200  Sum_probs=166.2

Q ss_pred             cCCCCCCceeeeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCc
Q psy9184         257 RYPSSALKNCKKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPC  330 (562)
Q Consensus       257 ~~~~~~y~~~~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~  330 (562)
                      .+...+|.++++||+|+||.|+++      +.||||++++..     ......++....|..|+...+.           
T Consensus       364 ~~~l~~F~~l~vLGkGsFGkV~lae~k~~~e~yAIK~LKK~~-----Il~~d~Ve~~~~EkrI~~la~~-----------  427 (694)
T KOG0694|consen  364 PLTLDDFRLLAVLGRGSFGKVLLAELKGTNEYYAIKVLKKGD-----ILQRDEVESLMCEKRIFELANR-----------  427 (694)
T ss_pred             cccccceEEEEEeccCcCceEEEEEEcCCCcEEEEEEeeccc-----eeccccHHHHHHHHHHHHHhcc-----------
Confidence            344578999999999999999999      899999999875     3445566788899999988885           


Q ss_pred             ccccccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc---cCCHHHHHHHHHHHHH
Q psy9184         331 FTELLKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK---YRSPNQTYAMILQVVF  407 (562)
Q Consensus       331 fv~l~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~---~l~e~~i~~I~~QIl~  407 (562)
                                    ||++++++..|++             .+++|+||||+.||+ +..++   .|++..++.++..|+.
T Consensus       428 --------------HPFL~~L~~~fQT-------------~~~l~fvmey~~Ggd-m~~~~~~~~F~e~rarfyaAev~l  479 (694)
T KOG0694|consen  428 --------------HPFLVNLFSCFQT-------------KEHLFFVMEYVAGGD-LMHHIHTDVFSEPRARFYAAEVVL  479 (694)
T ss_pred             --------------CCeEeeccccccc-------------CCeEEEEEEecCCCc-EEEEEecccccHHHHHHHHHHHHH
Confidence                          6999999999997             569999999999998 55554   4999999999999999


Q ss_pred             HHHHHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecC-----CcEEEeecCCCcc
Q psy9184         408 SLAVAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVG-----EKICYYDLSQDEE  482 (562)
Q Consensus       408 aL~yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~-----~g~v~~~l~~~pe  482 (562)
                      ||.|||+ +|||+||||.+|||++..|                    ++||+||||++....     ...++|+-|++||
T Consensus       480 ~L~fLH~-~~IIYRDlKLdNiLLD~eG--------------------h~kiADFGlcKe~m~~g~~TsTfCGTpey~aPE  538 (694)
T KOG0694|consen  480 GLQFLHE-NGIIYRDLKLDNLLLDTEG--------------------HVKIADFGLCKEGMGQGDRTSTFCGTPEFLAPE  538 (694)
T ss_pred             HHHHHHh-cCceeeecchhheEEcccC--------------------cEEecccccccccCCCCCccccccCChhhcChh
Confidence            9999999 7999999999999999998                    899999999998764     3456799999999


Q ss_pred             ccCCCCCcHHHHHHHhhcccCCCCCCCCCCC
Q psy9184         483 LFEGEGDYQFDMYRMMRKQCQNNWQNFTPKN  513 (562)
Q Consensus       483 lF~g~~~~q~dIy~lm~~~~~~~W~~~~P~t  513 (562)
                      +..+.....+.-|+.+|..++++.-+..|+.
T Consensus       539 il~e~~Yt~aVDWW~lGVLlyeML~Gq~PF~  569 (694)
T KOG0694|consen  539 VLTEQSYTRAVDWWGLGVLLYEMLVGESPFP  569 (694)
T ss_pred             hhccCcccchhhHHHHHHHHHHHHcCCCCCC
Confidence            9998655555667788888888888888886

>KOG0585|consensus

Probab=99.95  E-value=1.8e-27  Score=249.40  Aligned_cols=235  Identities=23%  Similarity=0.229  Sum_probs=169.3

Q ss_pred             CCCCCceeeeeeccCceEEEEE------eeEEEEEeecCCCCCCcc----h--hHHHHHHHHHHHHHHHhcCCccccCCC
Q psy9184         259 PSSALKNCKKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNG----E--EQKKFREIFSEIMVTKETSDLQYRTEN  326 (562)
Q Consensus       259 ~~~~y~~~~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~----~--~~~~~~~il~Ei~ilk~L~h~~~~~~n  326 (562)
                      .-..|++.+.||.|.||.|-+|      +.||||++.+........    .  ...-.+.+.+||.||++|.|       
T Consensus        95 ~lNqy~l~~eiG~G~yGkVkLar~~~~~~l~AiKil~K~~~~~~~~~~~~~a~~~~~~ekv~~EIailKkl~H-------  167 (576)
T KOG0585|consen   95 QLNQYELIKEIGSGQYGKVKLARDEVDGKLYAIKILPKKELRRQYGFPRQPAMKLMPIEKVRREIAILKKLHH-------  167 (576)
T ss_pred             ehhheehhhhhcCCccceEEEEeecCCCcEEEEEeechhhhhhhcccccccccccCcHHHHHHHHHHHHhcCC-------
Confidence            3467999999999999999999      899999998753211100    0  01124688999999999999       


Q ss_pred             CCCcccccccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc--c-CCHHHHHHHHH
Q psy9184         327 STPCFTELLKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK--Y-RSPNQTYAMIL  403 (562)
Q Consensus       327 ~~p~fv~l~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~--~-l~e~~i~~I~~  403 (562)
                                         ||||+|+++..+..           .+.+|||+|||..|.....-.  . +++.+++.|++
T Consensus       168 -------------------~nVV~LiEvLDDP~-----------s~~~YlVley~s~G~v~w~p~d~~els~~~Ar~ylr  217 (576)
T KOG0585|consen  168 -------------------PNVVKLIEVLDDPE-----------SDKLYLVLEYCSKGEVKWCPPDKPELSEQQARKYLR  217 (576)
T ss_pred             -------------------cCeeEEEEeecCcc-----------cCceEEEEEeccCCccccCCCCcccccHHHHHHHHH
Confidence                               99999999998743           678999999999997765432  3 88999999999


Q ss_pred             HHHHHHHHHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecC----------CcEE
Q psy9184         404 QVVFSLAVAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVG----------EKIC  473 (562)
Q Consensus       404 QIl~aL~yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~----------~g~v  473 (562)
                      .++.||.|||. +|||||||||+|+||+.++                    +|||+|||.|-....          ...+
T Consensus       218 Dvv~GLEYLH~-QgiiHRDIKPsNLLl~~~g--------------------~VKIsDFGVs~~~~~~~~~~~d~~L~~tv  276 (576)
T KOG0585|consen  218 DVVLGLEYLHY-QGIIHRDIKPSNLLLSSDG--------------------TVKISDFGVSNEFPQGSDEGSDDQLSRTV  276 (576)
T ss_pred             HHHHHHHHHHh-cCeeccccchhheEEcCCC--------------------cEEeeccceeeecccCCccccHHHHhhcC
Confidence            99999999999 7999999999999999997                    899999999987622          3467


Q ss_pred             EeecCCCccccCCCC-----CcHHHHHHHhhcccCCCCCCCCCCChhhhHHHHHHHHhhcccCCCCCCCchhHHHHHHHH
Q psy9184         474 YYDLSQDEELFEGEG-----DYQFDMYRMMRKQCQNNWQNFTPKNNVFWIHYLVDKATCLKKGYQYLRAPRHQAFELLEE  548 (562)
Q Consensus       474 ~~~l~~~pelF~g~~-----~~q~dIy~lm~~~~~~~W~~~~P~tn~~wl~yl~~~Ll~~~~~~~~~~~~~~~~~~~l~~  548 (562)
                      +|+.++|||+..+..     ....|||.+.-+.. =..-+-.||-... .--+-++.......|+...    ..-..++.
T Consensus       277 GTPAF~APE~c~~~~~~~~~g~a~DiWalGVTLY-CllfG~~PF~~~~-~~~l~~KIvn~pL~fP~~p----e~~e~~kD  350 (576)
T KOG0585|consen  277 GTPAFFAPELCSGGNSFSYSGFALDIWALGVTLY-CLLFGQLPFFDDF-ELELFDKIVNDPLEFPENP----EINEDLKD  350 (576)
T ss_pred             CCccccchHhhcCCCCccccchhhhhhhhhhhHH-HhhhccCCcccch-HHHHHHHHhcCcccCCCcc----cccHHHHH
Confidence            899999999877622     22378887655544 2222334553332 2223334433122233322    12344555


Q ss_pred             HHHhcCCCc
Q psy9184         549 LGQNALHFD  557 (562)
Q Consensus       549 l~~~~l~~~  557 (562)
                      |+.+||.=+
T Consensus       351 li~~lL~Kd  359 (576)
T KOG0585|consen  351 LIKRLLEKD  359 (576)
T ss_pred             HHHHHhhcC
Confidence            555655433

>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B

Probab=99.95  E-value=2e-27  Score=246.72  Aligned_cols=222  Identities=17%  Similarity=0.172  Sum_probs=167.4

Q ss_pred             eeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCccccccccccc
Q psy9184         267 KKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTELLKCSCV  340 (562)
Q Consensus       267 ~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~l~~~~iv  340 (562)
                      +.||+|+||.||+|      +.||+|++....     .........+.+|+.+++.++|                     
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~-----~~~~~~~~~~~~e~~~l~~l~h---------------------   54 (323)
T cd05571           1 KLLGKGTFGKVILVREKATGKYYAMKILKKEV-----IIAKDEVAHTLTESRVLQNTRH---------------------   54 (323)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHH-----hhhhHHHHHHHHHHHHHHhCCC---------------------
Confidence            46999999999999      789999998642     1223445677899999999998                     


Q ss_pred             CCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc---cCCHHHHHHHHHHHHHHHHHHHhhCC
Q psy9184         341 RGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK---YRSPNQTYAMILQVVFSLAVAEVELE  417 (562)
Q Consensus       341 ~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~---~l~e~~i~~I~~QIl~aL~yLH~~~~  417 (562)
                           |||+++++.|..             ++.+|+||||+.||++...+.   .+++.++..++.||+.||+|||+ .|
T Consensus        55 -----p~i~~~~~~~~~-------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~L~~lH~-~~  115 (323)
T cd05571          55 -----PFLTALKYSFQT-------------HDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALGYLHS-CD  115 (323)
T ss_pred             -----CCCCCEEEEEEc-------------CCEEEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHh-CC
Confidence                 999999988875             568999999999998866654   38999999999999999999999 79


Q ss_pred             eEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecC-----CcEEEeecCCCccccCCC-CCcH
Q psy9184         418 FEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVG-----EKICYYDLSQDEELFEGE-GDYQ  491 (562)
Q Consensus       418 IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~-----~g~v~~~l~~~pelF~g~-~~~q  491 (562)
                      |+||||||+|||++.++                    .+||+|||+|+....     ...+++..|++||++.+. .+..
T Consensus       116 ivHrDlkp~NIll~~~~--------------------~~kl~DfG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~  175 (323)
T cd05571         116 VVYRDLKLENLMLDKDG--------------------HIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDNDYGRA  175 (323)
T ss_pred             eEeCCCCHHHEEECCCC--------------------CEEEeeCCCCcccccCCCcccceecCccccChhhhcCCCCCcc
Confidence            99999999999999886                    799999999986432     234567889999998774 5667


Q ss_pred             HHHHHHhhcccCCCCCCCCCCChhhhHHHHHHHHhhcccCCCCCCCchhHHHHHHHHHHHhcCCCcCcCC
Q psy9184         492 FDMYRMMRKQCQNNWQNFTPKNNVFWIHYLVDKATCLKKGYQYLRAPRHQAFELLEELGQNALHFDSCYE  561 (562)
Q Consensus       492 ~dIy~lm~~~~~~~W~~~~P~tn~~wl~yl~~~Ll~~~~~~~~~~~~~~~~~~~l~~l~~~~l~~~s~~~  561 (562)
                      .|||++ |......+.+..|+.+..+.... .........++..      .-..+.+|.+.||.++...|
T Consensus       176 ~DiwSl-G~il~elltg~~Pf~~~~~~~~~-~~~~~~~~~~p~~------~~~~~~~li~~~L~~dP~~R  237 (323)
T cd05571         176 VDWWGL-GVVMYEMMCGRLPFYNQDHEKLF-ELILMEEIRFPRT------LSPEAKSLLAGLLKKDPKQR  237 (323)
T ss_pred             ccCccc-chhhhhhhcCCCCCCCCCHHHHH-HHHHcCCCCCCCC------CCHHHHHHHHHHccCCHHHc
Confidence            899875 44455666677777544332222 2222212333322      13466778888888776654

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be

>PTZ00263 protein kinase A catalytic subunit; Provisional

Probab=99.95  E-value=8.2e-28  Score=250.39  Aligned_cols=229  Identities=16%  Similarity=0.175  Sum_probs=172.8

Q ss_pred             CCCCceeeeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCcccc
Q psy9184         260 SSALKNCKKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTE  333 (562)
Q Consensus       260 ~~~y~~~~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~  333 (562)
                      .++|++.+.||+|+||.||+|      +.||+|++....     .......+.+.+|+.+++.++|              
T Consensus        17 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~-----~~~~~~~~~~~~E~~~l~~l~h--------------   77 (329)
T PTZ00263         17 LSDFEMGETLGTGSFGRVRIAKHKGTGEYYAIKCLKKRE-----ILKMKQVQHVAQEKSILMELSH--------------   77 (329)
T ss_pred             chheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHH-----HhhhhhHHHHHHHHHHHHhCCC--------------
Confidence            367999999999999999999      789999998642     1223345678899999999998              


Q ss_pred             cccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc---cCCHHHHHHHHHHHHHHHH
Q psy9184         334 LLKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK---YRSPNQTYAMILQVVFSLA  410 (562)
Q Consensus       334 l~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~---~l~e~~i~~I~~QIl~aL~  410 (562)
                                  |||+++++.|..             ++.+|+||||+.||++.+.+.   .+++..+..++.||+.||+
T Consensus        78 ------------p~iv~~~~~~~~-------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~  132 (329)
T PTZ00263         78 ------------PFIVNMMCSFQD-------------ENRVYFLLEFVVGGELFTHLRKAGRFPNDVAKFYHAELVLAFE  132 (329)
T ss_pred             ------------CCCCcEEEEEEc-------------CCEEEEEEcCCCCChHHHHHHHcCCCCHHHHHHHHHHHHHHHH
Confidence                        999999998875             568999999999998877664   4889999999999999999


Q ss_pred             HHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecCC--cEEEeecCCCccccCCC-
Q psy9184         411 VAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVGE--KICYYDLSQDEELFEGE-  487 (562)
Q Consensus       411 yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~~--g~v~~~l~~~pelF~g~-  487 (562)
                      |||+ .||+||||||+|||++.++                    .+||+|||+++.....  ...++..|++||++.+. 
T Consensus       133 ~LH~-~~ivH~dlkp~NIll~~~~--------------------~~kl~Dfg~~~~~~~~~~~~~gt~~y~aPE~~~~~~  191 (329)
T PTZ00263        133 YLHS-KDIIYRDLKPENLLLDNKG--------------------HVKVTDFGFAKKVPDRTFTLCGTPEYLAPEVIQSKG  191 (329)
T ss_pred             HHHH-CCeeecCCCHHHEEECCCC--------------------CEEEeeccCceEcCCCcceecCChhhcCHHHHcCCC
Confidence            9999 7999999999999999886                    7999999999876542  23456778999998874 


Q ss_pred             CCcHHHHHHHhhcccCCCCCCCCCCChhhhHHHHHHHHhhcccCCCCCCCchhHHHHHHHHHHHhcCCCcCcCC
Q psy9184         488 GDYQFDMYRMMRKQCQNNWQNFTPKNNVFWIHYLVDKATCLKKGYQYLRAPRHQAFELLEELGQNALHFDSCYE  561 (562)
Q Consensus       488 ~~~q~dIy~lm~~~~~~~W~~~~P~tn~~wl~yl~~~Ll~~~~~~~~~~~~~~~~~~~l~~l~~~~l~~~s~~~  561 (562)
                      .+...|||++ |......+.+..|+.+...... ..........++...      -..+.+|.+.+|+.+...|
T Consensus       192 ~~~~~Diwsl-G~il~elltg~~pf~~~~~~~~-~~~i~~~~~~~p~~~------~~~~~~li~~~L~~dP~~R  257 (329)
T PTZ00263        192 HGKAVDWWTM-GVLLYEFIAGYPPFFDDTPFRI-YEKILAGRLKFPNWF------DGRARDLVKGLLQTDHTKR  257 (329)
T ss_pred             CCCcceeech-HHHHHHHHcCCCCCCCCCHHHH-HHHHhcCCcCCCCCC------CHHHHHHHHHHhhcCHHHc
Confidence            4556888875 4444456667777654332221 222333122222211      2356677888888776655

>KOG0660|consensus

Probab=99.95  E-value=2.7e-28  Score=249.22  Aligned_cols=146  Identities=22%  Similarity=0.315  Sum_probs=125.1

Q ss_pred             CCCCceeeeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCcccc
Q psy9184         260 SSALKNCKKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTE  333 (562)
Q Consensus       260 ~~~y~~~~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~  333 (562)
                      ...|..++.||+|+||.|+.|      +.||||.+...      -..+-..++.++|+.+|+.++|              
T Consensus        21 ~~~y~~~~~iG~GAyGvVcsA~~~~t~~~VAIKKi~~~------F~~~~~akRtlRElklLr~~~H--------------   80 (359)
T KOG0660|consen   21 PRYYVLIEPIGRGAYGVVCSAKDKRTGEKVAIKKILNP------FENQIDAKRTLRELKLLRHLRH--------------   80 (359)
T ss_pred             cceecccccccCcceeeEEEEEEcCCCCEeehhhhhhh------hhchHHHHHHHHHHHHHHHhcC--------------
Confidence            356677899999999999999      89999998843      2235566788999999999999              


Q ss_pred             cccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCcccccc----CCHHHHHHHHHHHHHHH
Q psy9184         334 LLKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIKY----RSPNQTYAMILQVVFSL  409 (562)
Q Consensus       334 l~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~~----l~e~~i~~I~~QIl~aL  409 (562)
                                  +||+.+++++..        |....-..+|+|+|+|  ++++..+.+    ++++.+..++.||+.||
T Consensus        81 ------------eNIi~l~di~~p--------~~~~~f~DvYiV~elM--etDL~~iik~~~~L~d~H~q~f~YQiLrgL  138 (359)
T KOG0660|consen   81 ------------ENIIGLLDIFRP--------PSRDKFNDVYLVFELM--ETDLHQIIKSQQDLTDDHAQYFLYQILRGL  138 (359)
T ss_pred             ------------CCcceEEeeccc--------ccccccceeEEehhHH--hhHHHHHHHcCccccHHHHHHHHHHHHHhc
Confidence                        888888888864        2333456899999999  678887742    89999999999999999


Q ss_pred             HHHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeec
Q psy9184         410 AVAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFV  468 (562)
Q Consensus       410 ~yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~  468 (562)
                      .|+|+ .+|+||||||.|+|++.+.                    .+|||||||||...
T Consensus       139 KyiHS-AnViHRDLKPsNll~n~~c--------------------~lKI~DFGLAR~~~  176 (359)
T KOG0660|consen  139 KYIHS-ANVIHRDLKPSNLLLNADC--------------------DLKICDFGLARYLD  176 (359)
T ss_pred             chhhc-ccccccccchhheeeccCC--------------------CEEeccccceeecc
Confidence            99999 7999999999999999997                    68999999999984

>KOG0198|consensus

Probab=99.94  E-value=1e-26  Score=240.09  Aligned_cols=228  Identities=16%  Similarity=0.163  Sum_probs=169.6

Q ss_pred             CCCceeeeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCccccc
Q psy9184         261 SALKNCKKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTEL  334 (562)
Q Consensus       261 ~~y~~~~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~l  334 (562)
                      .++...+.||+|+||.||++      ..+|||.+....     .   ...+.+.+|+.+|.+|+|               
T Consensus        17 ~~~~~~~~lG~Gs~G~V~l~~~~~~g~~~AvK~v~~~~-----~---~~~~~l~~Ei~iL~~l~~---------------   73 (313)
T KOG0198|consen   17 SNWSKGKLLGRGSFGSVYLATNKKTGELMAVKSVELED-----S---PTSESLEREIRILSRLNH---------------   73 (313)
T ss_pred             chhhhhccccCccceEEEEEEecCCCcceeeeeeeccc-----c---hhHHHHHHHHHHHHhCCC---------------
Confidence            45788899999999999999      589999998763     1   115678999999999998               


Q ss_pred             ccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc----cCCHHHHHHHHHHHHHHHH
Q psy9184         335 LKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK----YRSPNQTYAMILQVVFSLA  410 (562)
Q Consensus       335 ~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~----~l~e~~i~~I~~QIl~aL~  410 (562)
                                 ||||++++......           +..++|.|||+.||++.+.+.    .+++..++.+.+||+.||.
T Consensus        74 -----------p~IV~~~G~~~~~~-----------~~~~~i~mEy~~~GsL~~~~~~~g~~l~E~~v~~ytr~iL~GL~  131 (313)
T KOG0198|consen   74 -----------PNIVQYYGSSSSRE-----------NDEYNIFMEYAPGGSLSDLIKRYGGKLPEPLVRRYTRQILEGLA  131 (313)
T ss_pred             -----------CCEEeeCCcccccc-----------CeeeEeeeeccCCCcHHHHHHHcCCCCCHHHHHHHHHHHHHHHH
Confidence                       99999998654321           126999999999998877665    4899999999999999999


Q ss_pred             HHHhhCCeEeccCCCCCEEEcc-CCCCCcccccCCcccccccCCceEEEEeccceeeecC--------CcEEEeecCCCc
Q psy9184         411 VAEVELEFEHRDLHMSNILVLQ-TDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVG--------EKICYYDLSQDE  481 (562)
Q Consensus       411 yLH~~~~IiHRDLKpeNILl~~-~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~--------~g~v~~~l~~~p  481 (562)
                      |||+ .|||||||||+|||++. ++                    .+||+|||+|+....        ....+++.|++|
T Consensus       132 ylHs-~g~vH~DiK~~NiLl~~~~~--------------------~~KlaDFG~a~~~~~~~~~~~~~~~~~Gtp~~maP  190 (313)
T KOG0198|consen  132 YLHS-KGIVHCDIKPANILLDPSNG--------------------DVKLADFGLAKKLESKGTKSDSELSVQGTPNYMAP  190 (313)
T ss_pred             HHHh-CCEeccCcccceEEEeCCCC--------------------eEEeccCccccccccccccccccccccCCccccCc
Confidence            9999 79999999999999999 45                    799999999987662        346678999999


Q ss_pred             cccC-CC-CCcHHHHHHHhhcccCCCCCCCCCCChh-hhHHHHHHHHhhcccCCCCCCCchhHHHHHHHHHHHhcCCCcC
Q psy9184         482 ELFE-GE-GDYQFDMYRMMRKQCQNNWQNFTPKNNV-FWIHYLVDKATCLKKGYQYLRAPRHQAFELLEELGQNALHFDS  558 (562)
Q Consensus       482 elF~-g~-~~~q~dIy~lm~~~~~~~W~~~~P~tn~-~wl~yl~~~Ll~~~~~~~~~~~~~~~~~~~l~~l~~~~l~~~s  558 (562)
                      |+.. |. .....|||+++-+.. ++..+..|+.+. .+..++..-...  ...+.....   .-...+.|.++.+.++.
T Consensus       191 Evi~~g~~~~~~sDiWSlGCtVv-EM~Tg~~PW~~~~~~~~~~~~ig~~--~~~P~ip~~---ls~~a~~Fl~~C~~~~p  264 (313)
T KOG0198|consen  191 EVIRNGEVARRESDIWSLGCTVV-EMLTGKPPWSEFFEEAEALLLIGRE--DSLPEIPDS---LSDEAKDFLRKCFKRDP  264 (313)
T ss_pred             hhhcCCCcCCccchhhhcCCEEE-eccCCCCcchhhcchHHHHHHHhcc--CCCCCCCcc---cCHHHHHHHHHHhhcCc
Confidence            9988 42 234699999887776 455555565552 222222222222  111111111   23456667777777765


Q ss_pred             cC
Q psy9184         559 CY  560 (562)
Q Consensus       559 ~~  560 (562)
                      ..
T Consensus       265 ~~  266 (313)
T KOG0198|consen  265 EK  266 (313)
T ss_pred             cc
Confidence            43

>KOG0658|consensus

Probab=99.94  E-value=7.7e-29  Score=253.56  Aligned_cols=174  Identities=19%  Similarity=0.267  Sum_probs=140.6

Q ss_pred             CCceeeeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCcccccc
Q psy9184         262 ALKNCKKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTELL  335 (562)
Q Consensus       262 ~y~~~~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~l~  335 (562)
                      .|...+++|.|+||.||+|      +.||||.+-.+..            ---+|+.+|+.++|                
T Consensus        25 ~~~~~~liG~GsFg~Vyq~~~~e~~~~vAIKKv~~d~r------------~knrEl~im~~l~H----------------   76 (364)
T KOG0658|consen   25 SYEAVRLIGSGSFGVVYQAKLRETEEEVAIKKVLQDKR------------YKNRELQIMRKLDH----------------   76 (364)
T ss_pred             EEEeeEEEeecccceEEEEEEcCCCceeEEEEecCCCC------------cCcHHHHHHHhcCC----------------
Confidence            3677899999999999999      8999999876541            12479999999998                


Q ss_pred             cccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc-------cCCHHHHHHHHHHHHHH
Q psy9184         336 KCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK-------YRSPNQTYAMILQVVFS  408 (562)
Q Consensus       336 ~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~-------~l~e~~i~~I~~QIl~a  408 (562)
                                ||||++.-+|....+.        ..-.+.+||||++ -++.+.+.       .++.-.++-+.+||++|
T Consensus        77 ----------pNIV~L~~~f~~~~~~--------d~~~lnlVleymP-~tL~~~~r~~~~~~~~mp~~~iKLYt~Qlfrg  137 (364)
T KOG0658|consen   77 ----------PNIVRLLYFFSSSTES--------DEVYLNLVLEYMP-ETLYRVIRHYTRANQRMPLLEIKLYTYQLFRG  137 (364)
T ss_pred             ----------cCeeeEEEEEEecCCC--------chhHHHHHHHhch-HHHHHHHHHHhhcCCCCceeeeHHHHHHHHHH
Confidence                      9999998888764311        1236779999997 34544443       37888999999999999


Q ss_pred             HHHHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecC-------------------
Q psy9184         409 LAVAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVG-------------------  469 (562)
Q Consensus       409 L~yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~-------------------  469 (562)
                      |+|||+ .||+||||||+|||++.+..                   .+||||||.|+.+..                   
T Consensus       138 l~yLh~-~~IcHRDIKPqNlLvD~~tg-------------------~LKicDFGSAK~L~~~epniSYicSRyYRaPELi  197 (364)
T KOG0658|consen  138 LAYLHS-HGICHRDIKPQNLLVDPDTG-------------------VLKICDFGSAKVLVKGEPNISYICSRYYRAPELI  197 (364)
T ss_pred             HHHHHh-cCcccCCCChheEEEcCCCC-------------------eEEeccCCcceeeccCCCceeEEEeccccCHHHH
Confidence            999999 89999999999999999853                   899999999998764                   


Q ss_pred             --------------CcEEEeecCCCccccCCCCCcH--HHHHHHhhccc
Q psy9184         470 --------------EKICYYDLSQDEELFEGEGDYQ--FDMYRMMRKQC  502 (562)
Q Consensus       470 --------------~g~v~~~l~~~pelF~g~~~~q--~dIy~lm~~~~  502 (562)
                                    .||+++|+..+.++|.|.....  ..|..++|+|.
T Consensus       198 fga~~Yt~~IDiWSaGCV~aELl~g~plFpG~s~~dQL~eIik~lG~Pt  246 (364)
T KOG0658|consen  198 FGATEYTTSIDIWSAGCVMAELLKGQPLFPGDSSVDQLVEIIKVLGTPT  246 (364)
T ss_pred             cCccccCceeEEhhhhHHHHHHhcCCcccCCCCHHHHHHHHHHHhCCCC
Confidence                          5777788888888888854333  77777888876

>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional

Probab=99.94  E-value=4.3e-27  Score=246.83  Aligned_cols=227  Identities=16%  Similarity=0.147  Sum_probs=169.2

Q ss_pred             CCCceeeeeeccCceEEEEE-------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCcccc
Q psy9184         261 SALKNCKKIGEGVYGEVFKL-------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTE  333 (562)
Q Consensus       261 ~~y~~~~~LG~GsfG~Vyka-------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~  333 (562)
                      ++|++.+.||+|+||.||+|       ..||+|++....     .......+.+.+|+.+++.++|              
T Consensus        30 ~~y~~~~~ig~G~~g~Vy~a~~~~~~~~~vavK~~~~~~-----~~~~~~~~~~~~E~~~l~~l~h--------------   90 (340)
T PTZ00426         30 EDFNFIRTLGTGSFGRVILATYKNEDFPPVAIKRFEKSK-----IIKQKQVDHVFSERKILNYINH--------------   90 (340)
T ss_pred             hhcEEEEEEeecCCeEEEEEEEECCCCeEEEEEEEEHHH-----hhhhhhHHHHHHHHHHHHhCCC--------------
Confidence            67999999999999999999       479999997542     1223445678899999999998              


Q ss_pred             cccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc---cCCHHHHHHHHHHHHHHHH
Q psy9184         334 LLKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK---YRSPNQTYAMILQVVFSLA  410 (562)
Q Consensus       334 l~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~---~l~e~~i~~I~~QIl~aL~  410 (562)
                                  |||++++++|.+             ++.+|+||||+.||++.+.+.   .+++..+..++.||+.||.
T Consensus        91 ------------p~Iv~~~~~~~~-------------~~~~~lv~Ey~~~g~L~~~i~~~~~~~~~~~~~~~~qi~~aL~  145 (340)
T PTZ00426         91 ------------PFCVNLYGSFKD-------------ESYLYLVLEFVIGGEFFTFLRRNKRFPNDVGCFYAAQIVLIFE  145 (340)
T ss_pred             ------------CCCcceEEEEEe-------------CCEEEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHH
Confidence                        999999999875             558999999999998877664   4889999999999999999


Q ss_pred             HHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecC--CcEEEeecCCCccccCCC-
Q psy9184         411 VAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVG--EKICYYDLSQDEELFEGE-  487 (562)
Q Consensus       411 yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~--~g~v~~~l~~~pelF~g~-  487 (562)
                      |||+ .||+||||||+|||++.++                    .+||+|||+++....  ....++..|++||++.+. 
T Consensus       146 ~LH~-~~ivHrDLkp~NILl~~~~--------------------~ikL~DFG~a~~~~~~~~~~~gt~~y~aPE~~~~~~  204 (340)
T PTZ00426        146 YLQS-LNIVYRDLKPENLLLDKDG--------------------FIKMTDFGFAKVVDTRTYTLCGTPEYIAPEILLNVG  204 (340)
T ss_pred             HHHH-CCeEccCCCHHHEEECCCC--------------------CEEEecCCCCeecCCCcceecCChhhcCHHHHhCCC
Confidence            9999 7999999999999998876                    799999999987654  233457779999998774 


Q ss_pred             CCcHHHHHHHhhcccCCCCCCCCCCChhhhHHHHHHHHhhcccCCCCCCCchhHHHHHHHHHHHhcCCCcCcC
Q psy9184         488 GDYQFDMYRMMRKQCQNNWQNFTPKNNVFWIHYLVDKATCLKKGYQYLRAPRHQAFELLEELGQNALHFDSCY  560 (562)
Q Consensus       488 ~~~q~dIy~lm~~~~~~~W~~~~P~tn~~wl~yl~~~Ll~~~~~~~~~~~~~~~~~~~l~~l~~~~l~~~s~~  560 (562)
                      .+...|||++ |........+..|+....-. .+.+.+......++..-      -..+..|.+++|..+...
T Consensus       205 ~~~~~DiwSl-Gvil~ell~G~~Pf~~~~~~-~~~~~i~~~~~~~p~~~------~~~~~~li~~~l~~dp~~  269 (340)
T PTZ00426        205 HGKAADWWTL-GIFIYEILVGCPPFYANEPL-LIYQKILEGIIYFPKFL------DNNCKHLMKKLLSHDLTK  269 (340)
T ss_pred             CCccccccch-hhHHHHHhcCCCCCCCCCHH-HHHHHHhcCCCCCCCCC------CHHHHHHHHHHcccCHHH
Confidence            4556899875 44444555666676443212 22233333122222211      234566677777655443

>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1

Probab=99.94  E-value=6.4e-27  Score=246.93  Aligned_cols=187  Identities=19%  Similarity=0.238  Sum_probs=150.7

Q ss_pred             CCCceeeeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCccccc
Q psy9184         261 SALKNCKKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTEL  334 (562)
Q Consensus       261 ~~y~~~~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~l  334 (562)
                      ++|++.+.||+|+||.||+|      +.||+|++....     .........+.+|+.+++.++|               
T Consensus         1 ~~y~~~~~LG~G~~g~V~~~~~~~~~~~~aiK~~~~~~-----~~~~~~~~~~~~E~~il~~~~~---------------   60 (363)
T cd05628           1 EDFESLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKAD-----MLEKEQVGHIRAERDILVEADS---------------   60 (363)
T ss_pred             CCceEeEEEEeCCCEEEEEEEECCCCCEEEEEEEEHHH-----HHHhhHHHHHHHHHHHHHhCCC---------------
Confidence            36899999999999999999      789999998642     1223345678889999999998               


Q ss_pred             ccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc---cCCHHHHHHHHHHHHHHHHH
Q psy9184         335 LKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK---YRSPNQTYAMILQVVFSLAV  411 (562)
Q Consensus       335 ~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~---~l~e~~i~~I~~QIl~aL~y  411 (562)
                                 |+|+++++.|.+             ...+|+|||||+||++.+.+.   .+++.+++.++.||+.||+|
T Consensus        61 -----------~~iv~~~~~~~~-------------~~~~~lv~E~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~  116 (363)
T cd05628          61 -----------LWVVKMFYSFQD-------------KLNLYLIMEFLPGGDMMTLLMKKDTLTEEETQFYIAETVLAIDS  116 (363)
T ss_pred             -----------CCcceEEEEEec-------------CCeEEEEEcCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHH
Confidence                       999999998875             558999999999998877664   48999999999999999999


Q ss_pred             HHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecC----------------------
Q psy9184         412 AEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVG----------------------  469 (562)
Q Consensus       412 LH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~----------------------  469 (562)
                      ||+ .||+||||||+|||++.++                    .+||+|||+|+....                      
T Consensus       117 lH~-~givHrDlKp~NILi~~~~--------------------~vkL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~  175 (363)
T cd05628         117 IHQ-LGFIHRDIKPDNLLLDSKG--------------------HVKLSDFGLCTGLKKAHRTEFYRNLNHSLPSDFTFQN  175 (363)
T ss_pred             HHh-CCeEecCCCHHHeEECCCC--------------------CEEEeeccCcccccccccccccccccccccccccccc
Confidence            999 7999999999999998876                    799999999875421                      


Q ss_pred             ------------------CcEEEeecCCCccccCCC-CCcHHHHHHHhhcccCCCCCCCCCCC
Q psy9184         470 ------------------EKICYYDLSQDEELFEGE-GDYQFDMYRMMRKQCQNNWQNFTPKN  513 (562)
Q Consensus       470 ------------------~g~v~~~l~~~pelF~g~-~~~q~dIy~lm~~~~~~~W~~~~P~t  513 (562)
                                        .+.+++..|++||++.+. .+...|||++. ........+..|+.
T Consensus       176 ~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~~DvwSlG-vil~ell~G~~Pf~  237 (363)
T cd05628         176 MNSKRKAETWKRNRRQLAFSTVGTPDYIAPEVFMQTGYNKLCDWWSLG-VIMYEMLIGYPPFC  237 (363)
T ss_pred             cccccccchhhhccccccccccCCccccCHHHHcCCCCCCchhhhhhH-HHHHHHHhCCCCCC
Confidence                              123567789999998764 45568998753 33334445555553

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus

>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=99.94  E-value=2.7e-27  Score=249.00  Aligned_cols=189  Identities=17%  Similarity=0.250  Sum_probs=152.1

Q ss_pred             CCCceeeeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCccccc
Q psy9184         261 SALKNCKKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTEL  334 (562)
Q Consensus       261 ~~y~~~~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~l  334 (562)
                      ++|++.+.||+|+||.||+|      +.||||++....     .........+.+|+.+++.++|               
T Consensus         1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~-----~~~~~~~~~~~~E~~il~~l~h---------------   60 (364)
T cd05599           1 DDFESIKVIGRGAFGEVRLVQKKDTGHIYAMKKLRKSE-----MLEKEQVAHVRAERDILAEADN---------------   60 (364)
T ss_pred             CCceEEEEEEecCCEEEEEEEECCCCCEEEEEEEEHHH-----hhhhhHHHHHHHHHHHHHhCCC---------------
Confidence            36899999999999999999      789999998642     1123344667889999999998               


Q ss_pred             ccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc---cCCHHHHHHHHHHHHHHHHH
Q psy9184         335 LKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK---YRSPNQTYAMILQVVFSLAV  411 (562)
Q Consensus       335 ~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~---~l~e~~i~~I~~QIl~aL~y  411 (562)
                                 |||+++++.|.+             ++.+|+|||||.||++.+.+.   .+++..++.++.||+.||+|
T Consensus        61 -----------~~iv~~~~~~~~-------------~~~~~lv~E~~~~g~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~  116 (364)
T cd05599          61 -----------PWVVKLYYSFQD-------------ENYLYLIMEYLPGGDMMTLLMKKDTFTEEETRFYIAETILAIDS  116 (364)
T ss_pred             -----------CCCcceEEEEEc-------------CCeEEEEECCCCCcHHHHHHHHcCCCCHHHHHHHHHHHHHHHHH
Confidence                       999999999875             568999999999998877664   38999999999999999999


Q ss_pred             HHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecCC---------------------
Q psy9184         412 AEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVGE---------------------  470 (562)
Q Consensus       412 LH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~~---------------------  470 (562)
                      ||+ .||+||||||+|||++.++                    .++|+|||+++.....                     
T Consensus       117 lH~-~~ivH~Dlkp~NIl~~~~~--------------------~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  175 (364)
T cd05599         117 IHK-LGYIHRDIKPDNLLLDAKG--------------------HIKLSDFGLCTGLKKSHRTEFYRILSHALPSNFLDFI  175 (364)
T ss_pred             HHH-CCeEeccCCHHHeEECCCC--------------------CEEEeecccceeccccccccccccccccccccccccc
Confidence            999 7999999999999999886                    7999999999764321                     


Q ss_pred             ----------------------cEEEeecCCCccccCCC-CCcHHHHHHHhhcccCCCCCCCCCCChh
Q psy9184         471 ----------------------KICYYDLSQDEELFEGE-GDYQFDMYRMMRKQCQNNWQNFTPKNNV  515 (562)
Q Consensus       471 ----------------------g~v~~~l~~~pelF~g~-~~~q~dIy~lm~~~~~~~W~~~~P~tn~  515 (562)
                                            ..+++..|++||++.+. .....|||++ |..+...+.+..|+...
T Consensus       176 ~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSl-G~il~el~~G~~Pf~~~  242 (364)
T cd05599         176 SKPMSSKRKAETWKRNRRALAYSTVGTPDYIAPEVFLQTGYNKECDWWSL-GVIMYEMLVGYPPFCSD  242 (364)
T ss_pred             cccccccccccchhhcccccccccccCccccCHHHHcCCCCCCeeeeecc-hhHHHHhhcCCCCCCCC
Confidence                                  13467789999988764 4555888875 44444555666666443

Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica

>KOG0667|consensus

Probab=99.94  E-value=7.3e-27  Score=253.63  Aligned_cols=179  Identities=21%  Similarity=0.263  Sum_probs=148.7

Q ss_pred             CCceeeeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCcccccc
Q psy9184         262 ALKNCKKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTELL  335 (562)
Q Consensus       262 ~y~~~~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~l~  335 (562)
                      +|.+.+.||+|+||+|.+|      +.||||+++..         .....+...|+.||..|+.. ....          
T Consensus       187 rY~V~e~LGkGtFGQVvk~~d~~T~e~VAIKIiKN~---------k~f~~Q~~~Ei~iL~~ln~~-d~~~----------  246 (586)
T KOG0667|consen  187 RYEVLEVLGKGSFGQVVKAYDHKTGEIVAIKIIKNK---------KRFLRQAQIEIRILELLNKH-DPDD----------  246 (586)
T ss_pred             EEEEEEEecccccceeEEEEecCCCcEEEEEeeccC---------hHHHHHHHHHHHHHHHHhcc-CCCC----------
Confidence            7899999999999999999      89999999965         35667888999999999931 1111          


Q ss_pred             cccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCcccccc-----CCHHHHHHHHHHHHHHHH
Q psy9184         336 KCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIKY-----RSPNQTYAMILQVVFSLA  410 (562)
Q Consensus       336 ~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~~-----l~e~~i~~I~~QIl~aL~  410 (562)
                               --|+|+++++|..             .+++|||+|++. -.|.+.++.     ++...++.++.||+.||.
T Consensus       247 ---------~~n~Vrm~d~F~f-------------r~HlciVfELL~-~NLYellK~n~f~Glsl~~ir~~~~Qil~~L~  303 (586)
T KOG0667|consen  247 ---------KYNIVRMLDYFYF-------------RNHLCIVFELLS-TNLYELLKNNKFRGLSLPLVRKFAQQILTALL  303 (586)
T ss_pred             ---------CeeEEEeeecccc-------------ccceeeeehhhh-hhHHHHHHhcCCCCCCHHHHHHHHHHHHHHHH
Confidence                     1589999999986             559999999995 345555542     889999999999999999


Q ss_pred             HHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecC---------------------
Q psy9184         411 VAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVG---------------------  469 (562)
Q Consensus       411 yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~---------------------  469 (562)
                      +||+ .+|||+|||||||||...+..                  .|||+|||+|.....                     
T Consensus       304 ~L~~-l~IIHcDLKPENILL~~~~r~------------------~vKVIDFGSSc~~~q~vytYiQSRfYRAPEVILGlp  364 (586)
T KOG0667|consen  304 FLHE-LGIIHCDLKPENILLKDPKRS------------------RIKVIDFGSSCFESQRVYTYIQSRFYRAPEVILGLP  364 (586)
T ss_pred             HHHh-CCeeeccCChhheeeccCCcC------------------ceeEEecccccccCCcceeeeeccccccchhhccCC
Confidence            9999 899999999999999987642                  799999999987654                     


Q ss_pred             ---------CcEEEeecCCCccccCCCCCcH--HHHHHHhhccc
Q psy9184         470 ---------EKICYYDLSQDEELFEGEGDYQ--FDMYRMMRKQC  502 (562)
Q Consensus       470 ---------~g~v~~~l~~~pelF~g~~~~q--~dIy~lm~~~~  502 (562)
                               .||+.+||+.|.++|.|..++.  .-|-..+|.|.
T Consensus       365 Y~~~IDmWSLGCIlAEL~tG~PLfpG~ne~DQl~~I~e~lG~Pp  408 (586)
T KOG0667|consen  365 YDTAIDMWSLGCILAELFTGEPLFPGDNEYDQLARIIEVLGLPP  408 (586)
T ss_pred             CCCccceeehhhhHHhHhcCccccCCCCHHHHHHHHHHHhCCCC
Confidence                     6999999999999999987665  55666666665

>KOG0192|consensus

Probab=99.94  E-value=8.9e-27  Score=246.19  Aligned_cols=172  Identities=20%  Similarity=0.248  Sum_probs=142.7

Q ss_pred             CCceeeeeeccCceEEEEE----ee-EEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCccccccc
Q psy9184         262 ALKNCKKIGEGVYGEVFKL----NN-SVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTELLK  336 (562)
Q Consensus       262 ~y~~~~~LG~GsfG~Vyka----~~-vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~l~~  336 (562)
                      .+...+.||.|+||+||+|    .. ||+|++.....      .....+.+.+|+.+|.+++|                 
T Consensus        42 ~l~~~~~iG~G~~g~V~~~~~~g~~~vavK~~~~~~~------~~~~~~~f~~E~~il~~l~H-----------------   98 (362)
T KOG0192|consen   42 ELPIEEVLGSGSFGTVYKGKWRGTDVVAVKIISDPDF------DDESRKAFRREASLLSRLRH-----------------   98 (362)
T ss_pred             HhhhhhhcccCCceeEEEEEeCCceeEEEEEecchhc------ChHHHHHHHHHHHHHHhCCC-----------------
Confidence            3455677999999999999    55 99999986531      12226789999999999999                 


Q ss_pred             ccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCcccc-----ccCCHHHHHHHHHHHHHHHHH
Q psy9184         337 CSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDI-----KYRSPNQTYAMILQVVFSLAV  411 (562)
Q Consensus       337 ~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l-----~~l~e~~i~~I~~QIl~aL~y  411 (562)
                               ||||++++++.+.            ...++|||||+++|++.+.+     ..++...+..++.||+.||.|
T Consensus        99 ---------pNIV~f~G~~~~~------------~~~~~iVtEy~~~GsL~~~l~~~~~~~l~~~~~l~~aldiArGm~Y  157 (362)
T KOG0192|consen   99 ---------PNIVQFYGACTSP------------PGSLCIVTEYMPGGSLSVLLHKKRKRKLPLKVRLRIALDIARGMEY  157 (362)
T ss_pred             ---------CCeeeEEEEEcCC------------CCceEEEEEeCCCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHH
Confidence                     9999999888751            12689999999999887766     248999999999999999999


Q ss_pred             HHhhCC-eEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecCC-----cEEEeecCCCccccC
Q psy9184         412 AEVELE-FEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVGE-----KICYYDLSQDEELFE  485 (562)
Q Consensus       412 LH~~~~-IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~~-----g~v~~~l~~~pelF~  485 (562)
                      ||+ ++ ||||||||+|||++.+..                   ++||+|||+|+.....     +..+|..|||||+|.
T Consensus       158 LH~-~~~iIHrDLK~~NiLv~~~~~-------------------~~KI~DFGlsr~~~~~~~~~~~~~GT~~wMAPEv~~  217 (362)
T KOG0192|consen  158 LHS-EGPIIHRDLKSDNILVDLKGK-------------------TLKIADFGLSREKVISKTSMTSVAGTYRWMAPEVLR  217 (362)
T ss_pred             Hhc-CCCeeecccChhhEEEcCCCC-------------------EEEECCCccceeeccccccccCCCCCccccChhhhc
Confidence            999 79 999999999999999852                   8999999999987642     245678899999999


Q ss_pred             CC---CCcHHHHHHH
Q psy9184         486 GE---GDYQFDMYRM  497 (562)
Q Consensus       486 g~---~~~q~dIy~l  497 (562)
                      +.   ++.++|||+-
T Consensus       218 ~~~~~~~~K~DvySF  232 (362)
T KOG0192|consen  218 GEKSPYTEKSDVYSF  232 (362)
T ss_pred             CCCCcCCccchhhhH
Confidence            64   6767888874

>KOG0588|consensus

Probab=99.94  E-value=2.5e-27  Score=256.21  Aligned_cols=228  Identities=18%  Similarity=0.186  Sum_probs=175.9

Q ss_pred             CCCceeeeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCccccc
Q psy9184         261 SALKNCKKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTEL  334 (562)
Q Consensus       261 ~~y~~~~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~l  334 (562)
                      +-|++++.||.|+-|.|-+|      +.+|||+|.+..     ...+.....+.+||.||+.|.|               
T Consensus        12 GpwkLgkTLG~Gstg~vrlakh~~TGqlaaiKii~k~~-----~~s~s~~~~IerEIviMkLi~H---------------   71 (786)
T KOG0588|consen   12 GPWKLGKTLGKGSTGCVRLAKHAETGQLAAIKIIPKRS-----ELSSSQPAGIEREIVIMKLIEH---------------   71 (786)
T ss_pred             cceeccccccCCCCceehhhhcccccceeEEEeecccc-----ccccccccchhhhhHHHHHhcC---------------
Confidence            56889999999999999999      999999999864     2234445678899999999999               


Q ss_pred             ccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc---cCCHHHHHHHHHHHHHHHHH
Q psy9184         335 LKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK---YRSPNQTYAMILQVVFSLAV  411 (562)
Q Consensus       335 ~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~---~l~e~~i~~I~~QIl~aL~y  411 (562)
                                 ||++++|++|.+             ..++|+|+||++||.+++.+.   .+++.++..+|+||+.|+.|
T Consensus        72 -----------pnVl~LydVwe~-------------~~~lylvlEyv~gGELFdylv~kG~l~e~eaa~ff~QIi~gv~y  127 (786)
T KOG0588|consen   72 -----------PNVLRLYDVWEN-------------KQHLYLVLEYVPGGELFDYLVRKGPLPEREAAHFFRQILDGVSY  127 (786)
T ss_pred             -----------CCeeeeeeeecc-------------CceEEEEEEecCCchhHHHHHhhCCCCCHHHHHHHHHHHHHHHH
Confidence                       999999999986             559999999999999999885   49999999999999999999


Q ss_pred             HHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecCC----cEEEeecCCCccccCCC
Q psy9184         412 AEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVGE----KICYYDLSQDEELFEGE  487 (562)
Q Consensus       412 LH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~~----g~v~~~l~~~pelF~g~  487 (562)
                      +|. ++|+||||||+|+|++..+                    .+||+|||+|....++    ..++.+-|.+||+..|.
T Consensus       128 CH~-~~icHRDLKpENlLLd~~~--------------------nIKIADFGMAsLe~~gklLeTSCGSPHYA~PEIV~G~  186 (786)
T KOG0588|consen  128 CHA-FNICHRDLKPENLLLDVKN--------------------NIKIADFGMASLEVPGKLLETSCGSPHYAAPEIVSGR  186 (786)
T ss_pred             Hhh-hcceeccCCchhhhhhccc--------------------CEeeeccceeecccCCccccccCCCcccCCchhhcCC
Confidence            999 8999999999999999997                    6999999999987763    34567889999999885


Q ss_pred             C--CcHHHHHHHhhcccCCCCCCCCCCChhhhHHHHHHHHhhcccCCCCCCCchhHHHHHHHHHHHhcCCCcCcCC
Q psy9184         488 G--DYQFDMYRMMRKQCQNNWQNFTPKNNVFWIHYLVDKATCLKKGYQYLRAPRHQAFELLEELGQNALHFDSCYE  561 (562)
Q Consensus       488 ~--~~q~dIy~lm~~~~~~~W~~~~P~tn~~wl~yl~~~Ll~~~~~~~~~~~~~~~~~~~l~~l~~~~l~~~s~~~  561 (562)
                      .  ...+|||+ +|..+.--..+.-||.+.. ++-+..|.....-..+..-      --+...|.++||.-++..|
T Consensus       187 pYdG~~sDVWS-CGVILfALLtG~LPFdDdN-ir~LLlKV~~G~f~MPs~I------s~eaQdLLr~ml~VDp~~R  254 (786)
T KOG0588|consen  187 PYDGRPSDVWS-CGVILFALLTGKLPFDDDN-IRVLLLKVQRGVFEMPSNI------SSEAQDLLRRMLDVDPSTR  254 (786)
T ss_pred             CCCCCccccch-hHHHHHHHHhCCCCCCCcc-HHHHHHHHHcCcccCCCcC------CHHHHHHHHHHhccCcccc
Confidence            2  22378865 3444333345666775544 4555555444111222111      1233455677777766654

>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor

Probab=99.94  E-value=6e-27  Score=247.89  Aligned_cols=187  Identities=17%  Similarity=0.227  Sum_probs=151.0

Q ss_pred             CCCceeeeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCccccc
Q psy9184         261 SALKNCKKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTEL  334 (562)
Q Consensus       261 ~~y~~~~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~l  334 (562)
                      ++|++++.||+|+||.||+|      +.||+|++....     .........+.+|+.+++.++|               
T Consensus         1 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~~avK~~~~~~-----~~~~~~~~~~~~E~~il~~l~h---------------   60 (376)
T cd05598           1 SMFVKIKTIGIGAFGEVCLVRKVDTNALYAMKTLRKAD-----VLMRNQAAHVKAERDILAEADN---------------   60 (376)
T ss_pred             CCceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEcHHH-----HHhhhhHHHHHHHHHHHHhCCC---------------
Confidence            36899999999999999999      789999987532     1122334667899999999998               


Q ss_pred             ccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc---cCCHHHHHHHHHHHHHHHHH
Q psy9184         335 LKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK---YRSPNQTYAMILQVVFSLAV  411 (562)
Q Consensus       335 ~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~---~l~e~~i~~I~~QIl~aL~y  411 (562)
                                 |||+++++.|.+             ++.+|+|||||+||++.+.+.   .+++..++.++.||+.||+|
T Consensus        61 -----------~~iv~~~~~~~~-------------~~~~~lv~E~~~~g~L~~~i~~~~~~~~~~~~~~~~qi~~al~~  116 (376)
T cd05598          61 -----------EWVVKLYYSFQD-------------KDNLYFVMDYIPGGDMMSLLIRLGIFEEDLARFYIAELTCAIES  116 (376)
T ss_pred             -----------CCcceEEEEEEc-------------CCEEEEEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHH
Confidence                       999999999875             568999999999998877664   37899999999999999999


Q ss_pred             HHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeec-----------------------
Q psy9184         412 AEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFV-----------------------  468 (562)
Q Consensus       412 LH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~-----------------------  468 (562)
                      ||+ .||+||||||+|||++.++                    .++|+|||+|....                       
T Consensus       117 lH~-~~ivHrDlkp~Nill~~~~--------------------~ikL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~  175 (376)
T cd05598         117 VHK-MGFIHRDIKPDNILIDRDG--------------------HIKLTDFGLCTGFRWTHDSKYYQKGDHHRQDSMEPSE  175 (376)
T ss_pred             HHH-CCeEeCCCCHHHEEECCCC--------------------CEEEEeCCCCccccccccccccccccccccccccccc
Confidence            999 7999999999999999876                    79999999975321                       


Q ss_pred             -------------------------CCcEEEeecCCCccccCCC-CCcHHHHHHHhhcccCCCCCCCCCCC
Q psy9184         469 -------------------------GEKICYYDLSQDEELFEGE-GDYQFDMYRMMRKQCQNNWQNFTPKN  513 (562)
Q Consensus       469 -------------------------~~g~v~~~l~~~pelF~g~-~~~q~dIy~lm~~~~~~~W~~~~P~t  513 (562)
                                               ..+.+++..|++||++.+. .+.+.|||++ |......+.+..|+.
T Consensus       176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSl-Gvilyell~G~~Pf~  245 (376)
T cd05598         176 EWSEIDRCRLKPLERRRKRQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSV-GVILYEMLVGQPPFL  245 (376)
T ss_pred             cccccccccccchhhhhhhhcccccccccCCCccccCHHHHcCCCCCcceeeeec-cceeeehhhCCCCCC
Confidence                                     0123567789999988764 5566899875 444555666666764

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.

>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C

Probab=99.94  E-value=1.1e-26  Score=241.14  Aligned_cols=187  Identities=17%  Similarity=0.187  Sum_probs=147.4

Q ss_pred             CCceeeeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCcccccc
Q psy9184         262 ALKNCKKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTELL  335 (562)
Q Consensus       262 ~y~~~~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~l~  335 (562)
                      +|++.+.||+|+||.||+|      +.||||++....     .......+.+..|+.++..+.|                
T Consensus         1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~-----~~~~~~~~~~~~e~~~l~~~~~----------------   59 (324)
T cd05587           1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDV-----IIQDDDVECTMVEKRVLALPGK----------------   59 (324)
T ss_pred             CceEEEEEeeccCeEEEEEEECCCCCEEEEEEEEHHH-----hhhhhHHHHHHHHHHHHHhcCC----------------
Confidence            4788999999999999999      689999998642     1123344677889999999988                


Q ss_pred             cccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc---cCCHHHHHHHHHHHHHHHHHH
Q psy9184         336 KCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK---YRSPNQTYAMILQVVFSLAVA  412 (562)
Q Consensus       336 ~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~---~l~e~~i~~I~~QIl~aL~yL  412 (562)
                               |++|+.+++.|..             .+.+|+||||++||++...+.   .+++.++..++.||+.||.||
T Consensus        60 ---------~~~i~~~~~~~~~-------------~~~~~lv~E~~~~g~L~~~~~~~~~~~~~~~~~~~~qi~~al~~l  117 (324)
T cd05587          60 ---------PPFLTQLHSCFQT-------------MDRLYFVMEYVNGGDLMYHIQQVGKFKEPHAVFYAAEIAIGLFFL  117 (324)
T ss_pred             ---------CCceeeeEEEEEc-------------CCEEEEEEcCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHH
Confidence                     5788889888865             558999999999998876653   488999999999999999999


Q ss_pred             HhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecC-----CcEEEeecCCCccccCCC
Q psy9184         413 EVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVG-----EKICYYDLSQDEELFEGE  487 (562)
Q Consensus       413 H~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~-----~g~v~~~l~~~pelF~g~  487 (562)
                      |+ .||+||||||+|||++.++                    .++|+|||+++....     ....++..|++||++.+.
T Consensus       118 H~-~~ivH~dlkp~Nill~~~~--------------------~~kL~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~  176 (324)
T cd05587         118 HS-KGIIYRDLKLDNVMLDAEG--------------------HIKIADFGMCKENIFGGKTTRTFCGTPDYIAPEIIAYQ  176 (324)
T ss_pred             HH-CCeEecCCCHHHeEEcCCC--------------------CEEEeecCcceecCCCCCceeeecCCccccChhhhcCC
Confidence            99 7999999999999999886                    799999999875422     123356789999988774


Q ss_pred             -CCcHHHHHHHhhcccCCCCCCCCCCC
Q psy9184         488 -GDYQFDMYRMMRKQCQNNWQNFTPKN  513 (562)
Q Consensus       488 -~~~q~dIy~lm~~~~~~~W~~~~P~t  513 (562)
                       .+...|||++.-.. .....+..|+.
T Consensus       177 ~~~~~~DiwslGvil-~elltG~~pf~  202 (324)
T cd05587         177 PYGKSVDWWAFGVLL-YEMLAGQPPFD  202 (324)
T ss_pred             CCCcccchhhhHHHH-HHHHhCCCCCC
Confidence             45668998754333 23344455553

Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory

>KOG0582|consensus

Probab=99.94  E-value=1.7e-26  Score=240.73  Aligned_cols=233  Identities=16%  Similarity=0.181  Sum_probs=185.2

Q ss_pred             CCCCceeeeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCcccc
Q psy9184         260 SSALKNCKKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTE  333 (562)
Q Consensus       260 ~~~y~~~~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~  333 (562)
                      ...|++..+||.|.-++||+|      +.||||++..+.       -...++.+.+|+..|..++|              
T Consensus        25 ~~~YeL~e~IG~G~sa~V~~A~c~p~~e~VAIK~inLEk-------c~~~ld~l~kE~~~msl~~H--------------   83 (516)
T KOG0582|consen   25 AKDYELQEVIGVGASAVVYLARCIPTNEVVAIKIINLEK-------CNNDLDALRKEVQTMSLIDH--------------   83 (516)
T ss_pred             ccceeEEEEEeccceeEeeeeeecccCCEEEEEEeehhh-------hhhhHHHHHHHHHHhhhcCC--------------
Confidence            468999999999999999999      899999999874       23347889999999999998              


Q ss_pred             cccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCcccccc-----CCHHHHHHHHHHHHHH
Q psy9184         334 LLKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIKY-----RSPNQTYAMILQVVFS  408 (562)
Q Consensus       334 l~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~~-----l~e~~i~~I~~QIl~a  408 (562)
                                  |||+++|..|..             +..+|+||.||.+|+.++.+..     ++|..+..|+++++.|
T Consensus        84 ------------PNIv~~~~sFvv-------------~~~LWvVmpfMa~GS~ldIik~~~~~Gl~E~~Ia~iLre~Lka  138 (516)
T KOG0582|consen   84 ------------PNIVTYHCSFVV-------------DSELWVVMPFMAGGSLLDIIKTYYPDGLEEASIATILREVLKA  138 (516)
T ss_pred             ------------CCcceEEEEEEe-------------cceeEEeehhhcCCcHHHHHHHHccccccHHHHHHHHHHHHHH
Confidence                        999999999986             6699999999999999887753     8899999999999999


Q ss_pred             HHHHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecCC---------cEEEeecCC
Q psy9184         409 LAVAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVGE---------KICYYDLSQ  479 (562)
Q Consensus       409 L~yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~~---------g~v~~~l~~  479 (562)
                      |.|||. +|-||||||+.||||+.+|                    .|||+|||.+-.+...         ..+.++.|+
T Consensus       139 L~YLH~-~G~IHRdvKAgnILi~~dG--------------------~VkLadFgvsa~l~~~G~R~~~rf~tfvgtp~wm  197 (516)
T KOG0582|consen  139 LDYLHQ-NGHIHRDVKAGNILIDSDG--------------------TVKLADFGVSASLFDSGDRQVTRFNTFVGTPCWM  197 (516)
T ss_pred             HHHHHh-cCceecccccccEEEcCCC--------------------cEEEcCceeeeeecccCceeeEeeccccCccccc
Confidence            999999 7999999999999999998                    7999999988766552         235688899


Q ss_pred             Cccc-cCC--CCCcHHHHHHHhhcccCCCCCCCCCCChhhhHHHHHHHHhhcccCCCCCCCchhHH----HHHHHHHHHh
Q psy9184         480 DEEL-FEG--EGDYQFDMYRMMRKQCQNNWQNFTPKNNVFWIHYLVDKATCLKKGYQYLRAPRHQA----FELLEELGQN  552 (562)
Q Consensus       480 ~pel-F~g--~~~~q~dIy~lm~~~~~~~W~~~~P~tn~~wl~yl~~~Ll~~~~~~~~~~~~~~~~----~~~l~~l~~~  552 (562)
                      +||+ .+.  .++.++|||+..-+.+ +-=.+..|+....-+..+..+|-. ..+..-.......+    -+.+.+|...
T Consensus       198 APEvl~q~~~GYdfKaDIwSfGITA~-ELA~G~aPf~k~pPmkvLl~tLqn-~pp~~~t~~~~~d~~k~~~ksf~e~i~~  275 (516)
T KOG0582|consen  198 APEVLMQQLHGYDFKADIWSFGITAC-ELAHGHAPFSKYPPMKVLLLTLQN-DPPTLLTSGLDKDEDKKFSKSFREMIAL  275 (516)
T ss_pred             ChHHhhhcccCccchhhhhhhhHHHH-HHhcCCCCcccCChHHHHHHHhcC-CCCCcccccCChHHhhhhcHHHHHHHHH
Confidence            9998 444  3566799999766665 333566777777778888777776 22211111111111    4567788888


Q ss_pred             cCCCcCcCC
Q psy9184         553 ALHFDSCYE  561 (562)
Q Consensus       553 ~l~~~s~~~  561 (562)
                      .|+++...|
T Consensus       276 CL~kDP~kR  284 (516)
T KOG0582|consen  276 CLVKDPSKR  284 (516)
T ss_pred             HhhcCcccC
Confidence            888776543

>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases

Probab=99.94  E-value=1e-26  Score=241.93  Aligned_cols=187  Identities=19%  Similarity=0.301  Sum_probs=152.1

Q ss_pred             CCceeeeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCcccccc
Q psy9184         262 ALKNCKKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTELL  335 (562)
Q Consensus       262 ~y~~~~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~l~  335 (562)
                      +|++.+.||+|+||.||+|      +.||||++....     .........+.+|+.+++.++|                
T Consensus         2 ~y~~~~~ig~G~~g~Vy~~~~~~~~~~vaiK~~~~~~-----~~~~~~~~~~~~e~~~l~~~~h----------------   60 (333)
T cd05600           2 DFQILTQVGQGGYGQVFLAKKKDTGEIVALKRMKKSL-----LFKLNEVRHVLTERDILTTTKS----------------   60 (333)
T ss_pred             CcEEEEEEeecCCeEEEEEEECCCCCEEEEEEEEHHH-----HhhhhHHHHHHHHHHHHHhCCC----------------
Confidence            6899999999999999999      789999998642     1122345678899999999998                


Q ss_pred             cccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc---cCCHHHHHHHHHHHHHHHHHH
Q psy9184         336 KCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK---YRSPNQTYAMILQVVFSLAVA  412 (562)
Q Consensus       336 ~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~---~l~e~~i~~I~~QIl~aL~yL  412 (562)
                                |||+++++.+..             ++.+|+||||++||++.+.+.   .+++.+++.++.||+.||.||
T Consensus        61 ----------~~iv~~~~~~~~-------------~~~~~lv~e~~~g~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~l  117 (333)
T cd05600          61 ----------EWLVKLLYAFQD-------------DEYLYLAMEYVPGGDFRTLLNNLGVLSEDHARFYMAEMFEAVDAL  117 (333)
T ss_pred             ----------CCCccEEEEEEc-------------CCEEEEEEeCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHH
Confidence                      999999988875             558999999999998876664   488999999999999999999


Q ss_pred             HhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecC--CcEEEeecCCCccccCCC-CC
Q psy9184         413 EVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVG--EKICYYDLSQDEELFEGE-GD  489 (562)
Q Consensus       413 H~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~--~g~v~~~l~~~pelF~g~-~~  489 (562)
                      |+ .||+||||||+|||++.++                    .+||+|||+|+....  ...+++..|++||++.+. .+
T Consensus       118 H~-~~ivH~dlkp~Nil~~~~~--------------------~~kL~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~  176 (333)
T cd05600         118 HE-LGYIHRDLKPENFLIDASG--------------------HIKLTDFGLSKGIVTYANSVVGSPDYMAPEVLRGKGYD  176 (333)
T ss_pred             HH-CCccccCCCHHHEEECCCC--------------------CEEEEeCcCCcccccccCCcccCccccChhHhcCCCCC
Confidence            99 7999999999999998876                    799999999987643  344567789999988774 45


Q ss_pred             cHHHHHHHhhcccCCCCCCCCCCCh
Q psy9184         490 YQFDMYRMMRKQCQNNWQNFTPKNN  514 (562)
Q Consensus       490 ~q~dIy~lm~~~~~~~W~~~~P~tn  514 (562)
                      ...|||++ |........+..|+..
T Consensus       177 ~~~Dvwsl-G~il~ell~g~~pf~~  200 (333)
T cd05600         177 FTVDYWSL-GCMLYEFLCGFPPFSG  200 (333)
T ss_pred             Cccceecc-hHHHhhhhhCCCCCCC
Confidence            66899875 3333344555566543

Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.

>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=99.94  E-value=7.7e-27  Score=247.36  Aligned_cols=186  Identities=20%  Similarity=0.264  Sum_probs=149.4

Q ss_pred             CCceeeeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCcccccc
Q psy9184         262 ALKNCKKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTELL  335 (562)
Q Consensus       262 ~y~~~~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~l~  335 (562)
                      +|.+.++||+|+||.||+|      +.||||++....     .........+.+|+.+++.++|                
T Consensus         2 ~y~~~~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~-----~~~~~~~~~~~~E~~il~~l~h----------------   60 (377)
T cd05629           2 DFHTVKVIGKGAFGEVRLVQKKDTGKIYAMKTLLKSE-----MFKKDQLAHVKAERDVLAESDS----------------   60 (377)
T ss_pred             CceEeEEEeecCCEEEEEEEECCCCCEEEEEEEEHHH-----HHHhHHHHHHHHHHHHHHhCCC----------------
Confidence            6889999999999999999      789999987542     1223445678899999999998                


Q ss_pred             cccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc---cCCHHHHHHHHHHHHHHHHHH
Q psy9184         336 KCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK---YRSPNQTYAMILQVVFSLAVA  412 (562)
Q Consensus       336 ~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~---~l~e~~i~~I~~QIl~aL~yL  412 (562)
                                |||++++++|.+             ++.+|+||||++||++.+.+.   .+++..++.++.||+.||.||
T Consensus        61 ----------p~iv~~~~~~~~-------------~~~~~lv~E~~~gg~L~~~l~~~~~~~~~~~~~~~~ql~~aL~~L  117 (377)
T cd05629          61 ----------PWVVSLYYSFQD-------------AQYLYLIMEFLPGGDLMTMLIKYDTFSEDVTRFYMAECVLAIEAV  117 (377)
T ss_pred             ----------CCcceEEEEEEc-------------CCeeEEEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHH
Confidence                      999999999875             558999999999998877654   488999999999999999999


Q ss_pred             HhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecC-----------------------
Q psy9184         413 EVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVG-----------------------  469 (562)
Q Consensus       413 H~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~-----------------------  469 (562)
                      |+ +||+||||||+|||++.++                    .++|+|||+|+....                       
T Consensus       118 H~-~givHrDlkp~NIll~~~~--------------------~~kl~DfGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~  176 (377)
T cd05629         118 HK-LGFIHRDIKPDNILIDRGG--------------------HIKLSDFGLSTGFHKQHDSAYYQKLLQGKSNKNRIDNR  176 (377)
T ss_pred             Hh-CCeeccCCCHHHEEECCCC--------------------CEEEeecccccccccccccccccccccccccccccccc
Confidence            99 7999999999999998876                    799999999963211                       


Q ss_pred             -----------------------------CcEEEeecCCCccccCCC-CCcHHHHHHHhhcccCCCCCCCCCCC
Q psy9184         470 -----------------------------EKICYYDLSQDEELFEGE-GDYQFDMYRMMRKQCQNNWQNFTPKN  513 (562)
Q Consensus       470 -----------------------------~g~v~~~l~~~pelF~g~-~~~q~dIy~lm~~~~~~~W~~~~P~t  513 (562)
                                                   ...+++..|++||++.+. .+...|||++ |..+.....+..|+.
T Consensus       177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSl-Gvil~elltG~~Pf~  249 (377)
T cd05629         177 NSVAVDSINLTMSSKDQIATWKKNRRLMAYSTVGTPDYIAPEIFLQQGYGQECDWWSL-GAIMFECLIGWPPFC  249 (377)
T ss_pred             cccccccccccccchhhhhhhhhcccccccccCCCccccCHHHHccCCCCCceeeEec-chhhhhhhcCCCCCC
Confidence                                         013467779999988763 4556888875 444445556666663

Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of

>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3

Probab=99.94  E-value=9.2e-27  Score=242.33  Aligned_cols=176  Identities=20%  Similarity=0.264  Sum_probs=138.6

Q ss_pred             CCCCCCceeeeeeccCceEEEEE-----------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCC
Q psy9184         258 YPSSALKNCKKIGEGVYGEVFKL-----------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTEN  326 (562)
Q Consensus       258 ~~~~~y~~~~~LG~GsfG~Vyka-----------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n  326 (562)
                      ++.++|++.++||+|+||.||+|           ..||+|++....       .......+.+|+.+++.+.+       
T Consensus         4 ~~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~-------~~~~~~~~~~E~~~l~~l~~-------   69 (338)
T cd05102           4 FPRDRLRLGKVLGHGAFGKVVEASAFGIDKKSSCNTVAVKMLKEGA-------TASEHKALMSELKILIHIGN-------   69 (338)
T ss_pred             cchhHceeeeEeccCCcceEEEEEEeccCCcccchhhheecccccc-------chHHHHHHHHHHHHHHHhcc-------
Confidence            45678999999999999999998           369999987532       12334678899999999943       


Q ss_pred             CCCcccccccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc---------------
Q psy9184         327 STPCFTELLKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK---------------  391 (562)
Q Consensus       327 ~~p~fv~l~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~---------------  391 (562)
                                        ||||+++++++..            .++.+|++|||+++|++.+.+.               
T Consensus        70 ------------------h~niv~~~~~~~~------------~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~  119 (338)
T cd05102          70 ------------------HLNVVNLLGACTK------------PNGPLMVIVEFCKYGNLSNFLRAKREFFSPYREKSPK  119 (338)
T ss_pred             ------------------CcceeeEEeEecC------------CCCceEEEEecCCCCcHHHHHHhcchhcccccccchh
Confidence                              3999999988764            1346899999999998754432               


Q ss_pred             --------------------------------------------------cCCHHHHHHHHHHHHHHHHHHHhhCCeEec
Q psy9184         392 --------------------------------------------------YRSPNQTYAMILQVVFSLAVAEVELEFEHR  421 (562)
Q Consensus       392 --------------------------------------------------~l~e~~i~~I~~QIl~aL~yLH~~~~IiHR  421 (562)
                                                                        .+++..+..++.||+.||.|||+ .||+||
T Consensus       120 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~-~~ivHr  198 (338)
T cd05102         120 QRGRFRAMVEQSRVDRRIEAGQASVLFSRFQPSTSGSTNPPQETDDLWKSPLTMEDLICYSFQVARGMEFLAS-RKCIHR  198 (338)
T ss_pred             hhhhhhhhhhhhccccccccccCCccccccccccCcccccchhccccccCCCCHHHHHHHHHHHHHHHHHHHH-CCEECC
Confidence                                                              25677889999999999999999 799999


Q ss_pred             cCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecCC-------cEEEeecCCCccccCC-CCCcHHH
Q psy9184         422 DLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVGE-------KICYYDLSQDEELFEG-EGDYQFD  493 (562)
Q Consensus       422 DLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~~-------g~v~~~l~~~pelF~g-~~~~q~d  493 (562)
                      ||||+|||++.++                    .+||+|||+++.....       ....+..|++||++.+ ..+.+.|
T Consensus       199 DiKp~Nil~~~~~--------------------~~kl~DfG~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sD  258 (338)
T cd05102         199 DLAARNILLSENN--------------------VVKICDFGLARDIYKDPDYVRKGSARLPLKWMAPESIFDKVYTTQSD  258 (338)
T ss_pred             CCccceEEEcCCC--------------------cEEEeecccccccccCcchhcccCCCCCccccCcHHhhcCCCCcccC
Confidence            9999999998876                    7999999999865321       1122346889997655 4566689


Q ss_pred             HHHHh
Q psy9184         494 MYRMM  498 (562)
Q Consensus       494 Iy~lm  498 (562)
                      ||++.
T Consensus       259 iwslG  263 (338)
T cd05102         259 VWSFG  263 (338)
T ss_pred             HHHHH
Confidence            98753

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V

>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha

Probab=99.94  E-value=1.5e-26  Score=240.04  Aligned_cols=223  Identities=17%  Similarity=0.166  Sum_probs=163.0

Q ss_pred             eeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCccccccccccc
Q psy9184         267 KKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTELLKCSCV  340 (562)
Q Consensus       267 ~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~l~~~~iv  340 (562)
                      +.||+|+||.||+|      ..||+|++....     .........+.+|+.+++.++|                     
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~a~K~~~~~~-----~~~~~~~~~~~~e~~~l~~~~h---------------------   54 (325)
T cd05594           1 KLLGKGTFGKVILVKEKATGRYYAMKILKKEV-----IVAKDEVAHTLTENRVLQNSRH---------------------   54 (325)
T ss_pred             CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHH-----hhhhhHHHHHHHHHHHHHhCCC---------------------
Confidence            46999999999999      789999998642     1123344567889999999998                     


Q ss_pred             CCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc---cCCHHHHHHHHHHHHHHHHHHHhhCC
Q psy9184         341 RGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK---YRSPNQTYAMILQVVFSLAVAEVELE  417 (562)
Q Consensus       341 ~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~---~l~e~~i~~I~~QIl~aL~yLH~~~~  417 (562)
                           |||+++++.|..             ++.+|+||||+.||++...+.   .+++..+..++.||+.||.|||+..|
T Consensus        55 -----p~i~~~~~~~~~-------------~~~~~lv~E~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~lH~~~~  116 (325)
T cd05594          55 -----PFLTALKYSFQT-------------HDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEKN  116 (325)
T ss_pred             -----CCCCceEEEEEc-------------CCEEEEEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhcCC
Confidence                 999999988875             558999999999998766553   48999999999999999999997359


Q ss_pred             eEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecC-----CcEEEeecCCCccccCC-CCCcH
Q psy9184         418 FEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVG-----EKICYYDLSQDEELFEG-EGDYQ  491 (562)
Q Consensus       418 IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~-----~g~v~~~l~~~pelF~g-~~~~q  491 (562)
                      |+||||||+|||++.++                    .+||+|||+++....     ....++..|++||++.+ ..+..
T Consensus       117 ivHrDikp~NIll~~~~--------------------~~kL~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~  176 (325)
T cd05594         117 VVYRDLKLENLMLDKDG--------------------HIKITDFGLCKEGIKDGATMKTFCGTPEYLAPEVLEDNDYGRA  176 (325)
T ss_pred             EEecCCCCCeEEECCCC--------------------CEEEecCCCCeecCCCCcccccccCCcccCCHHHHccCCCCCc
Confidence            99999999999999886                    799999999986432     12345678999999876 45566


Q ss_pred             HHHHHHhhcccCCCCCCCCCCChhhhHHHHHHHHhhcccCCCCCCCchhHHHHHHHHHHHhcCCCcCcCC
Q psy9184         492 FDMYRMMRKQCQNNWQNFTPKNNVFWIHYLVDKATCLKKGYQYLRAPRHQAFELLEELGQNALHFDSCYE  561 (562)
Q Consensus       492 ~dIy~lm~~~~~~~W~~~~P~tn~~wl~yl~~~Ll~~~~~~~~~~~~~~~~~~~l~~l~~~~l~~~s~~~  561 (562)
                      .|||++ |..+...+.+..|+.+...-.. ..........++..-      -..+..|.+.||.++...|
T Consensus       177 ~Diwsl-G~il~el~tG~~Pf~~~~~~~~-~~~i~~~~~~~p~~~------~~~~~~li~~~L~~dP~~R  238 (325)
T cd05594         177 VDWWGL-GVVMYEMMCGRLPFYNQDHEKL-FELILMEEIRFPRTL------SPEAKSLLSGLLKKDPKQR  238 (325)
T ss_pred             cccccc-cceeeeeccCCCCCCCCCHHHH-HHHHhcCCCCCCCCC------CHHHHHHHHHHhhcCHHHh
Confidence            899875 4444456667777744332221 122222122333221      2356667777777665544

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien

>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase

Probab=99.94  E-value=1.4e-26  Score=237.31  Aligned_cols=186  Identities=16%  Similarity=0.222  Sum_probs=147.6

Q ss_pred             CCCCceeeeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCcccc
Q psy9184         260 SSALKNCKKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTE  333 (562)
Q Consensus       260 ~~~y~~~~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~  333 (562)
                      .++|++.++||+|+||.||+|      +.||+|++.....       ......+.+|+.+++.++|              
T Consensus         4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~-------~~~~~~~~~E~~~l~~l~h--------------   62 (303)
T cd07869           4 ADSYEKLEKLGEGSYATVYKGKSKVNGKLVALKVIRLQEE-------EGTPFTAIREASLLKGLKH--------------   62 (303)
T ss_pred             cccceEeeeEEecCCEEEEEEEECCCCCEEEEEEeccccc-------cccchhHHHHHHHHhhCCC--------------
Confidence            478999999999999999999      6899999975431       1112356789999999998              


Q ss_pred             cccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc----cCCHHHHHHHHHHHHHHH
Q psy9184         334 LLKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK----YRSPNQTYAMILQVVFSL  409 (562)
Q Consensus       334 l~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~----~l~e~~i~~I~~QIl~aL  409 (562)
                                  |||+++++++.+             +...|+||||+. |++++.+.    .+++..++.++.||+.||
T Consensus        63 ------------~niv~~~~~~~~-------------~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~al  116 (303)
T cd07869          63 ------------ANIVLLHDIIHT-------------KETLTLVFEYVH-TDLCQYMDKHPGGLHPENVKLFLFQLLRGL  116 (303)
T ss_pred             ------------CCcCeEEEEEec-------------CCeEEEEEECCC-cCHHHHHHhCCCCCCHHHHHHHHHHHHHHH
Confidence                        999999998875             558999999996 45655543    378999999999999999


Q ss_pred             HHHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecC-----CcEEEeecCCCcccc
Q psy9184         410 AVAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVG-----EKICYYDLSQDEELF  484 (562)
Q Consensus       410 ~yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~-----~g~v~~~l~~~pelF  484 (562)
                      +|||+ .+|+||||||+|||++.++                    .+||+|||+++....     .+...+..|++||++
T Consensus       117 ~~lH~-~~ivH~dlkp~Nill~~~~--------------------~~kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~  175 (303)
T cd07869         117 SYIHQ-RYILHRDLKPQNLLISDTG--------------------ELKLADFGLARAKSVPSHTYSNEVVTLWYRPPDVL  175 (303)
T ss_pred             HHHHH-CCeecCCCCHHHEEECCCC--------------------CEEECCCCcceeccCCCccCCCCcccCCCCChHHH
Confidence            99999 7999999999999999876                    799999999986542     234456789999998


Q ss_pred             CCC--CCcHHHHHHHhhcccCCCCCCCCCCCh
Q psy9184         485 EGE--GDYQFDMYRMMRKQCQNNWQNFTPKNN  514 (562)
Q Consensus       485 ~g~--~~~q~dIy~lm~~~~~~~W~~~~P~tn  514 (562)
                      .+.  .+...|||++. ......+.+..|+..
T Consensus       176 ~~~~~~~~~~DiwslG-~il~~l~~g~~pf~~  206 (303)
T cd07869         176 LGSTEYSTCLDMWGVG-CIFVEMIQGVAAFPG  206 (303)
T ss_pred             cCCCCCCcHHHHHHHH-HHHHHHHhCCCCCCC
Confidence            764  34568998864 333345556666643

Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an

>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma

Probab=99.94  E-value=1e-26  Score=242.29  Aligned_cols=222  Identities=18%  Similarity=0.152  Sum_probs=161.6

Q ss_pred             eeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCccccccccccc
Q psy9184         267 KKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTELLKCSCV  340 (562)
Q Consensus       267 ~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~l~~~~iv  340 (562)
                      +.||+|+||.||+|      ..||+|++....     .........+.+|+.+++.++|                     
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~-----~~~~~~~~~~~~E~~~l~~l~h---------------------   54 (328)
T cd05593           1 KLLGKGTFGKVILVREKASGKYYAMKILKKEV-----IIAKDEVAHTLTESRVLKNTRH---------------------   54 (328)
T ss_pred             CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHH-----hhhhhHHHHHHHHHHHHHhCCC---------------------
Confidence            46999999999999      789999998642     1223345678899999999998                     


Q ss_pred             CCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc---cCCHHHHHHHHHHHHHHHHHHHhhCC
Q psy9184         341 RGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK---YRSPNQTYAMILQVVFSLAVAEVELE  417 (562)
Q Consensus       341 ~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~---~l~e~~i~~I~~QIl~aL~yLH~~~~  417 (562)
                           |||+++++.+..             ++.+|+||||+.+|++...+.   .+++.++..++.||+.||+|||+ .|
T Consensus        55 -----p~iv~~~~~~~~-------------~~~~~lv~Ey~~~g~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~LH~-~~  115 (328)
T cd05593          55 -----PFLTSLKYSFQT-------------KDRLCFVMEYVNGGELFFHLSRERVFSEDRTRFYGAEIVSALDYLHS-GK  115 (328)
T ss_pred             -----CCCcceEEEEEc-------------CCEEEEEEeCCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHh-CC
Confidence                 999999888875             568999999999998866553   48899999999999999999999 79


Q ss_pred             eEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecC-----CcEEEeecCCCccccCCC-CCcH
Q psy9184         418 FEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVG-----EKICYYDLSQDEELFEGE-GDYQ  491 (562)
Q Consensus       418 IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~-----~g~v~~~l~~~pelF~g~-~~~q  491 (562)
                      |+||||||+|||++.++                    .+||+|||+++....     ....++..|++||++.+. .+..
T Consensus       116 ivHrDikp~NIll~~~~--------------------~~kL~DfG~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~  175 (328)
T cd05593         116 IVYRDLKLENLMLDKDG--------------------HIKITDFGLCKEGITDAATMKTFCGTPEYLAPEVLEDNDYGRA  175 (328)
T ss_pred             eEecccCHHHeEECCCC--------------------cEEEecCcCCccCCCcccccccccCCcCccChhhhcCCCCCcc
Confidence            99999999999999876                    799999999986432     123356788999998763 4556


Q ss_pred             HHHHHHhhcccCCCCCCCCCCChhhhHHHHHHHHhhcccCCCCCCCchhHHHHHHHHHHHhcCCCcCcCC
Q psy9184         492 FDMYRMMRKQCQNNWQNFTPKNNVFWIHYLVDKATCLKKGYQYLRAPRHQAFELLEELGQNALHFDSCYE  561 (562)
Q Consensus       492 ~dIy~lm~~~~~~~W~~~~P~tn~~wl~yl~~~Ll~~~~~~~~~~~~~~~~~~~l~~l~~~~l~~~s~~~  561 (562)
                      .|||++ |......+.+..|+.+.-+...+...+.. ...++..-      -..+..|.++||..+...|
T Consensus       176 ~Diwsl-Gvil~elltG~~Pf~~~~~~~~~~~~~~~-~~~~p~~~------~~~~~~li~~~L~~dP~~R  237 (328)
T cd05593         176 VDWWGL-GVVMYEMMCGRLPFYNQDHEKLFELILME-DIKFPRTL------SADAKSLLSGLLIKDPNKR  237 (328)
T ss_pred             CCcccc-chHHHHHhhCCCCCCCCCHHHHHHHhccC-CccCCCCC------CHHHHHHHHHHcCCCHHHc
Confidence            888875 33333455566666544333322222222 22232211      2356667777777665443

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate

>KOG0610|consensus

Probab=99.94  E-value=5.4e-27  Score=242.73  Aligned_cols=226  Identities=19%  Similarity=0.187  Sum_probs=179.2

Q ss_pred             CCCceeeeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCccccc
Q psy9184         261 SALKNCKKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTEL  334 (562)
Q Consensus       261 ~~y~~~~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~l  334 (562)
                      ..|++++.||.|.-|.||+|      ..+|+|++.+..     ....+...++..|-.||+.++|               
T Consensus        77 ~~f~llk~LG~GdiG~VyL~~l~~t~~~fAmKVmdK~~-----l~~rkKl~Ra~tE~eIL~~lDH---------------  136 (459)
T KOG0610|consen   77 RHFRLLKRLGCGDIGTVYLVELRGTNCLFAMKVMDKES-----LASRKKLKRAQTEREILSLLDH---------------  136 (459)
T ss_pred             HHHHHHHHcCCCCceeEEEEEecCCCceEEEEEecHHH-----HhhhhHHHHHHHHHHHHHhcCC---------------
Confidence            56889999999999999999      799999999875     3446677888999999999999               


Q ss_pred             ccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc-----cCCHHHHHHHHHHHHHHH
Q psy9184         335 LKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK-----YRSPNQTYAMILQVVFSL  409 (562)
Q Consensus       335 ~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~-----~l~e~~i~~I~~QIl~aL  409 (562)
                                 |.+..||..|+.             +...|+|||||+||++....+     .+++..++.++.+|+.||
T Consensus       137 -----------PFlPTLYa~fet-------------~~~~cl~meyCpGGdL~~LrqkQp~~~fse~~aRFYaAEvl~AL  192 (459)
T KOG0610|consen  137 -----------PFLPTLYASFET-------------DKYSCLVMEYCPGGDLHSLRQKQPGKRFSESAARFYAAEVLLAL  192 (459)
T ss_pred             -----------Cccchhhheeec-------------cceeEEEEecCCCccHHHHHhhCCCCccchhhHHHHHHHHHHHH
Confidence                       999999999986             668999999999997755554     299999999999999999


Q ss_pred             HHHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeec---------------------
Q psy9184         410 AVAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFV---------------------  468 (562)
Q Consensus       410 ~yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~---------------------  468 (562)
                      +|||- +|||.||||||||||..+|                    +|-|+||-||....                     
T Consensus       193 EYLHm-lGivYRDLKPENILvredG--------------------HIMLsDFDLS~~~~~~Pt~~~s~~~~~~~~~~~~~  251 (459)
T KOG0610|consen  193 EYLHM-LGIVYRDLKPENILVREDG--------------------HIMLSDFDLSLRCPVSPTLVKSSSPRSSGSQPSCR  251 (459)
T ss_pred             HHHHh-hceeeccCCcceeEEecCC--------------------cEEeeeccccccCCCCCeeeccCCCCCCCCCcccc
Confidence            99999 8999999999999999998                    56666665543210                     


Q ss_pred             ----------------------------------------CCcEEEeecCCCccccCCCCCcHHHHHHHhhcccCCCCCC
Q psy9184         469 ----------------------------------------GEKICYYDLSQDEELFEGEGDYQFDMYRMMRKQCQNNWQN  508 (562)
Q Consensus       469 ----------------------------------------~~g~v~~~l~~~pelF~g~~~~q~dIy~lm~~~~~~~W~~  508 (562)
                                                              ...+++|+-|.+||+..|.+.-.+.-||.+|..++++.-+
T Consensus       252 ~~~~s~f~~r~~~~~~~~~k~~~~~~~~~p~~~aep~~~RSnSFVGThEYlAPEvI~G~GHgsAVDWWtfGIflYEmLyG  331 (459)
T KOG0610|consen  252 SRQPSCFSPRCLSSSKKRKKKDESASRSLPELVAEPTGARSNSFVGTHEYLAPEVIRGEGHGSAVDWWTFGIFLYEMLYG  331 (459)
T ss_pred             cccccccccchhccccccccccccccccchhhhcCCCCccccccccccccccceeeecCCCCchhhHHHHHHHHHHHHhC
Confidence                                                    0346778889999999998776667788899998888888


Q ss_pred             CCCC---ChhhhHHHHHHHHhhcccCCCCCCCchhHHHHHHHHHHHhcCCCcCc
Q psy9184         509 FTPK---NNVFWIHYLVDKATCLKKGYQYLRAPRHQAFELLEELGQNALHFDSC  559 (562)
Q Consensus       509 ~~P~---tn~~wl~yl~~~Ll~~~~~~~~~~~~~~~~~~~l~~l~~~~l~~~s~  559 (562)
                      ..|+   .|..-|..|+.+-+    .|+...    ......+.|++++|.=+..
T Consensus       332 ~TPFKG~~~~~Tl~NIv~~~l----~Fp~~~----~vs~~akDLIr~LLvKdP~  377 (459)
T KOG0610|consen  332 TTPFKGSNNKETLRNIVGQPL----KFPEEP----EVSSAAKDLIRKLLVKDPS  377 (459)
T ss_pred             CCCcCCCCchhhHHHHhcCCC----cCCCCC----cchhHHHHHHHHHhccChh
Confidence            8888   34444555544333    354443    2345667777888764443

>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase

Probab=99.94  E-value=1.9e-26  Score=234.95  Aligned_cols=184  Identities=18%  Similarity=0.213  Sum_probs=146.8

Q ss_pred             CCCceeeeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCccccc
Q psy9184         261 SALKNCKKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTEL  334 (562)
Q Consensus       261 ~~y~~~~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~l  334 (562)
                      ++|++.++||+|+||.||+|      ..||+|++.....       ......+.+|+.+++.++|               
T Consensus         5 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~-------~~~~~~~~~E~~~l~~l~h---------------   62 (288)
T cd07871           5 ETYVKLDKLGEGTYATVFKGRSKLTENLVALKEIRLEHE-------EGAPCTAIREVSLLKNLKH---------------   62 (288)
T ss_pred             ccceEeeEEecCCCEEEEEEEECCCCCEEEEEEeccccc-------CCcchhHHHHHHHHHhCCC---------------
Confidence            67999999999999999999      7899999976431       1122456789999999998               


Q ss_pred             ccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc----cCCHHHHHHHHHHHHHHHH
Q psy9184         335 LKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK----YRSPNQTYAMILQVVFSLA  410 (562)
Q Consensus       335 ~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~----~l~e~~i~~I~~QIl~aL~  410 (562)
                                 |||+++++++.+             ++..|+||||+.+ ++.+.+.    .+++..+..++.||+.||+
T Consensus        63 -----------~niv~~~~~~~~-------------~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~~~~qi~~aL~  117 (288)
T cd07871          63 -----------ANIVTLHDIIHT-------------ERCLTLVFEYLDS-DLKQYLDNCGNLMSMHNVKIFMFQLLRGLS  117 (288)
T ss_pred             -----------CCEeeEEEEEcC-------------CCeEEEEEeCCCc-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHH
Confidence                       999999998875             4589999999984 5655443    3788999999999999999


Q ss_pred             HHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecC-----CcEEEeecCCCccccC
Q psy9184         411 VAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVG-----EKICYYDLSQDEELFE  485 (562)
Q Consensus       411 yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~-----~g~v~~~l~~~pelF~  485 (562)
                      |||+ .||+||||||+|||++.++                    .+||+|||+++....     .+...+..|++||++.
T Consensus       118 ~LH~-~~ivH~dlkp~Nil~~~~~--------------------~~kl~DfG~~~~~~~~~~~~~~~~~~~~y~aPE~~~  176 (288)
T cd07871         118 YCHK-RKILHRDLKPQNLLINEKG--------------------ELKLADFGLARAKSVPTKTYSNEVVTLWYRPPDVLL  176 (288)
T ss_pred             HHHh-CCcccCCCCHHHEEECCCC--------------------CEEECcCcceeeccCCCccccCceecccccChHHhc
Confidence            9999 7999999999999999886                    799999999986542     2345677899999887


Q ss_pred             CC--CCcHHHHHHHhhcccCCCCCCCCCCC
Q psy9184         486 GE--GDYQFDMYRMMRKQCQNNWQNFTPKN  513 (562)
Q Consensus       486 g~--~~~q~dIy~lm~~~~~~~W~~~~P~t  513 (562)
                      +.  .....|||++. ......+.+..|+.
T Consensus       177 ~~~~~~~~~DiwslG-~~l~~l~~g~~pf~  205 (288)
T cd07871         177 GSTEYSTPIDMWGVG-CILYEMATGRPMFP  205 (288)
T ss_pred             CCcccCcHHHHHHHH-HHHHHHHhCCCCCC
Confidence            63  45569999864 33334455555553

Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament

>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta

Probab=99.94  E-value=1.6e-26  Score=239.67  Aligned_cols=228  Identities=14%  Similarity=0.128  Sum_probs=164.7

Q ss_pred             CCceeeeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCcccccc
Q psy9184         262 ALKNCKKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTELL  335 (562)
Q Consensus       262 ~y~~~~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~l~  335 (562)
                      +|.+.+.||+|+||.||+|      +.||+|++....     .........+..|..++..+.|                
T Consensus         1 df~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~-----~~~~~~~~~~~~e~~~l~~~~~----------------   59 (323)
T cd05616           1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDV-----VIQDDDVECTMVEKRVLALSGK----------------   59 (323)
T ss_pred             CceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEHHH-----hhhhhHHHHHHHHHHHHHhccC----------------
Confidence            4788999999999999999      689999998642     1122334567788888888876                


Q ss_pred             cccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc---cCCHHHHHHHHHHHHHHHHHH
Q psy9184         336 KCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK---YRSPNQTYAMILQVVFSLAVA  412 (562)
Q Consensus       336 ~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~---~l~e~~i~~I~~QIl~aL~yL  412 (562)
                               |++|+.+++.+..             .+.+|+||||++||++...+.   .+++.++..++.||+.||+||
T Consensus        60 ---------~~~i~~~~~~~~~-------------~~~~~lv~E~~~~g~L~~~~~~~~~~~~~~~~~~~~qi~~aL~~L  117 (323)
T cd05616          60 ---------PPFLTQLHSCFQT-------------MDRLYFVMEYVNGGDLMYQIQQVGRFKEPHAVFYAAEIAIGLFFL  117 (323)
T ss_pred             ---------CCeEeeEEEEEec-------------CCEEEEEEcCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHH
Confidence                     6999999988875             558999999999998876653   488999999999999999999


Q ss_pred             HhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecC-----CcEEEeecCCCccccCCC
Q psy9184         413 EVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVG-----EKICYYDLSQDEELFEGE  487 (562)
Q Consensus       413 H~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~-----~g~v~~~l~~~pelF~g~  487 (562)
                      |+ .||+||||||+|||++.++                    .+||+|||+++....     ....++..|++||++.+.
T Consensus       118 H~-~~ivHrDlkp~Nill~~~~--------------------~~kL~DfG~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~  176 (323)
T cd05616         118 HS-KGIIYRDLKLDNVMLDSEG--------------------HIKIADFGMCKENMWDGVTTKTFCGTPDYIAPEIIAYQ  176 (323)
T ss_pred             HH-CCEEecCCCHHHeEECCCC--------------------cEEEccCCCceecCCCCCccccCCCChhhcCHHHhcCC
Confidence            99 7999999999999999886                    799999999986432     123456779999988774


Q ss_pred             -CCcHHHHHHHhhcccCCCCCCCCCCChhhhHHHHHHHHhhcccCCCCCCCchhHHHHHHHHHHHhcCCCcCcCC
Q psy9184         488 -GDYQFDMYRMMRKQCQNNWQNFTPKNNVFWIHYLVDKATCLKKGYQYLRAPRHQAFELLEELGQNALHFDSCYE  561 (562)
Q Consensus       488 -~~~q~dIy~lm~~~~~~~W~~~~P~tn~~wl~yl~~~Ll~~~~~~~~~~~~~~~~~~~l~~l~~~~l~~~s~~~  561 (562)
                       .+...|||++.-. ......+..|+..... ..+..........++..      ....+..|..++|+.+...|
T Consensus       177 ~~~~~~DiwSlGvi-l~elltg~~Pf~~~~~-~~~~~~i~~~~~~~p~~------~s~~~~~li~~~l~~~p~~R  243 (323)
T cd05616         177 PYGKSVDWWAFGVL-LYEMLAGQAPFEGEDE-DELFQSIMEHNVAYPKS------MSKEAVAICKGLMTKHPGKR  243 (323)
T ss_pred             CCCCccchhchhHH-HHHHHhCCCCCCCCCH-HHHHHHHHhCCCCCCCc------CCHHHHHHHHHHcccCHHhc
Confidence             4556899876433 3334455556543321 12223333312222221      12355666777776655443

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and

>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1

Probab=99.94  E-value=8e-27  Score=247.66  Aligned_cols=140  Identities=18%  Similarity=0.322  Sum_probs=122.3

Q ss_pred             CCceeeeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCcccccc
Q psy9184         262 ALKNCKKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTELL  335 (562)
Q Consensus       262 ~y~~~~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~l~  335 (562)
                      +|..+++||+|+||.||+|      +.||+|++....     .........+.+|+.+++.++|                
T Consensus         2 ~f~~~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~-----~~~~~~~~~~~~E~~il~~~~h----------------   60 (382)
T cd05625           2 MFVKIKTLGIGAFGEVCLARKVDTKALYAMKTLRKKD-----VLLRNQVAHVKAERDILAEADN----------------   60 (382)
T ss_pred             CcEEEEEEEeCCCEEEEEEEECCCCCEEEEEEEeHHH-----hhhHHHHHHHHHHHHHHHhCCC----------------
Confidence            5889999999999999999      789999998642     1223445678899999999998                


Q ss_pred             cccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc---cCCHHHHHHHHHHHHHHHHHH
Q psy9184         336 KCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK---YRSPNQTYAMILQVVFSLAVA  412 (562)
Q Consensus       336 ~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~---~l~e~~i~~I~~QIl~aL~yL  412 (562)
                                |||+++++.|.+             ++.+|+|||||+||++.+.+.   .+++..++.++.||+.||.||
T Consensus        61 ----------~~iv~~~~~~~~-------------~~~~~lv~E~~~gg~L~~~l~~~~~~~e~~~~~~~~qi~~al~~l  117 (382)
T cd05625          61 ----------EWVVRLYYSFQD-------------KDNLYFVMDYIPGGDMMSLLIRMGIFPEDLARFYIAELTCAVESV  117 (382)
T ss_pred             ----------CcCCeEEEEEEe-------------CCEEEEEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHH
Confidence                      999999999875             558999999999998877664   378999999999999999999


Q ss_pred             HhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceee
Q psy9184         413 EVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRC  466 (562)
Q Consensus       413 H~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~  466 (562)
                      |+ .||+||||||+|||++.++                    .+||+|||+|+.
T Consensus       118 H~-~~ivHrDlKp~NILl~~~g--------------------~~kL~DFGla~~  150 (382)
T cd05625         118 HK-MGFIHRDIKPDNILIDRDG--------------------HIKLTDFGLCTG  150 (382)
T ss_pred             Hh-CCeecCCCCHHHEEECCCC--------------------CEEEeECCCCcc
Confidence            99 7999999999999999886                    799999999753

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an

>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta

Probab=99.94  E-value=1.5e-26  Score=240.40  Aligned_cols=221  Identities=16%  Similarity=0.158  Sum_probs=159.8

Q ss_pred             eeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCccccccccccc
Q psy9184         267 KKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTELLKCSCV  340 (562)
Q Consensus       267 ~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~l~~~~iv  340 (562)
                      +.||+|+||.||+|      ..||+|++....     .........+.+|+.+++.++|                     
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~-----~~~~~~~~~~~~E~~~l~~l~h---------------------   54 (323)
T cd05595           1 KLLGKGTFGKVILVREKATGRYYAMKILRKEV-----IIAKDEVAHTVTESRVLQNTRH---------------------   54 (323)
T ss_pred             CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHH-----hhhhHHHHHHHHHHHHHHhCCC---------------------
Confidence            46999999999999      789999998642     1123345677889999999998                     


Q ss_pred             CCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc---cCCHHHHHHHHHHHHHHHHHHHhhCC
Q psy9184         341 RGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK---YRSPNQTYAMILQVVFSLAVAEVELE  417 (562)
Q Consensus       341 ~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~---~l~e~~i~~I~~QIl~aL~yLH~~~~  417 (562)
                           |||+++++.|..             ++.+|+||||+.||++...+.   .+++..++.++.||+.||.|||+ .|
T Consensus        55 -----p~i~~~~~~~~~-------------~~~~~lv~E~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~-~~  115 (323)
T cd05595          55 -----PFLTALKYAFQT-------------HDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHS-RD  115 (323)
T ss_pred             -----CCCcceeeEEec-------------CCEEEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHH-CC
Confidence                 999999988875             558999999999998765553   38999999999999999999999 79


Q ss_pred             eEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecC-----CcEEEeecCCCccccCC-CCCcH
Q psy9184         418 FEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVG-----EKICYYDLSQDEELFEG-EGDYQ  491 (562)
Q Consensus       418 IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~-----~g~v~~~l~~~pelF~g-~~~~q  491 (562)
                      |+||||||+|||++.++                    .+||+|||+++....     ....++..|++||.+.+ ..+..
T Consensus       116 ivH~Dlkp~NIll~~~~--------------------~~kL~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~  175 (323)
T cd05595         116 VVYRDIKLENLMLDKDG--------------------HIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDNDYGRA  175 (323)
T ss_pred             eEecCCCHHHEEEcCCC--------------------CEEecccHHhccccCCCCccccccCCcCcCCcccccCCCCCch
Confidence            99999999999999886                    799999999886432     12345678999999876 45666


Q ss_pred             HHHHHHhhcccCCCCCCCCCCChhhhHHHHHHHHhhcccCCCCCCCchhHHHHHHHHHHHhcCCCcCcC
Q psy9184         492 FDMYRMMRKQCQNNWQNFTPKNNVFWIHYLVDKATCLKKGYQYLRAPRHQAFELLEELGQNALHFDSCY  560 (562)
Q Consensus       492 ~dIy~lm~~~~~~~W~~~~P~tn~~wl~yl~~~Ll~~~~~~~~~~~~~~~~~~~l~~l~~~~l~~~s~~  560 (562)
                      .|||++.-.. ...+.+..|+......... .........++..-      -..+.+|.+.+|..+...
T Consensus       176 ~DiwSlGvil-~ell~g~~Pf~~~~~~~~~-~~~~~~~~~~p~~~------~~~~~~li~~~L~~dP~~  236 (323)
T cd05595         176 VDWWGLGVVM-YEMMCGRLPFYNQDHERLF-ELILMEEIRFPRTL------SPEAKSLLAGLLKKDPKQ  236 (323)
T ss_pred             hchhhhHHHH-HHHHhCCCCCCCCCHHHHH-HHHhcCCCCCCCCC------CHHHHHHHHHHccCCHHH
Confidence            8998754333 3344455565433222222 22222122232211      235566677777665443

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in

>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2

Probab=99.94  E-value=2.3e-26  Score=239.06  Aligned_cols=187  Identities=21%  Similarity=0.282  Sum_probs=148.3

Q ss_pred             CCceeeeeeccCceEEEEE---------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCccc
Q psy9184         262 ALKNCKKIGEGVYGEVFKL---------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFT  332 (562)
Q Consensus       262 ~y~~~~~LG~GsfG~Vyka---------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv  332 (562)
                      +|++.+.||+|+||.||+|         ..||+|++.....    .......+.+..|+.+++.+.+             
T Consensus         1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~----~~~~~~~~~~~~e~~~l~~l~~-------------   63 (332)
T cd05614           1 NFELLKVLGTGAYGKVFLVRKVTGHDTGKLYAMKVLQKAAL----VQKAKTVEHTRTERNVLEHVRQ-------------   63 (332)
T ss_pred             CceEEEEEeecCCEEEEEEEEcccCCCCCEEEEEEEEHHHH----hhhhhHHHHHHHHHHHHHhccC-------------
Confidence            4789999999999999987         5799999975321    1122344567889999999976             


Q ss_pred             ccccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc---cCCHHHHHHHHHHHHHHH
Q psy9184         333 ELLKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK---YRSPNQTYAMILQVVFSL  409 (562)
Q Consensus       333 ~l~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~---~l~e~~i~~I~~QIl~aL  409 (562)
                                  ||+|+.+++.|..             ++.+|+||||+.||++.+.+.   .+++.++..++.||+.||
T Consensus        64 ------------~~~i~~~~~~~~~-------------~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l  118 (332)
T cd05614          64 ------------SPFLVTLHYAFQT-------------EAKLHLILDYVSGGEMFTHLYQRDNFSEDEVRFYSGEIILAL  118 (332)
T ss_pred             ------------CCCcccEEEEEec-------------CCEEEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHH
Confidence                        5999999988875             568999999999998877663   489999999999999999


Q ss_pred             HHHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecC------CcEEEeecCCCccc
Q psy9184         410 AVAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVG------EKICYYDLSQDEEL  483 (562)
Q Consensus       410 ~yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~------~g~v~~~l~~~pel  483 (562)
                      .|||+ .||+||||||+|||++.++                    .+||+|||+++....      ....++..|++||+
T Consensus       119 ~~lH~-~~ivHrDlkp~Nili~~~~--------------------~~kl~DfG~~~~~~~~~~~~~~~~~gt~~y~aPE~  177 (332)
T cd05614         119 EHLHK-LGIVYRDIKLENILLDSEG--------------------HVVLTDFGLSKEFLSEEKERTYSFCGTIEYMAPEI  177 (332)
T ss_pred             HHHHH-CCcEecCCCHHHeEECCCC--------------------CEEEeeCcCCccccccCCCccccccCCccccCHHH
Confidence            99999 7999999999999999886                    799999999986432      12345778999999


Q ss_pred             cCCC--CCcHHHHHHHhhcccCCCCCCCCCC
Q psy9184         484 FEGE--GDYQFDMYRMMRKQCQNNWQNFTPK  512 (562)
Q Consensus       484 F~g~--~~~q~dIy~lm~~~~~~~W~~~~P~  512 (562)
                      +.+.  .....|||++ |........+..|+
T Consensus       178 ~~~~~~~~~~~Diwsl-G~il~elltg~~pf  207 (332)
T cd05614         178 IRGKGGHGKAVDWWSL-GILIFELLTGASPF  207 (332)
T ss_pred             hcCCCCCCCccccccc-hhhhhhhhcCCCCC
Confidence            8764  3455899875 33444445555555

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph

>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases

Probab=99.94  E-value=1.7e-26  Score=240.94  Aligned_cols=189  Identities=18%  Similarity=0.291  Sum_probs=153.7

Q ss_pred             CCCceeeeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCccccc
Q psy9184         261 SALKNCKKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTEL  334 (562)
Q Consensus       261 ~~y~~~~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~l  334 (562)
                      ++|.+.+.||+|+||.||+|      +.||||++....     .........+..|+.++..++|               
T Consensus         1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~-----~~~~~~~~~~~~e~~~l~~~~~---------------   60 (350)
T cd05573           1 DDFEVIKVIGRGAFGEVWLVRDKDTGQVYAMKVLRKSD-----MIKRNQIAHVRAERDILADADS---------------   60 (350)
T ss_pred             CCceEEEEEEeCCcEEEEEEEECCCCCEEEEEEEEHHH-----HhhccHHHHHHHHHHHHHhcCC---------------
Confidence            36899999999999999999      789999998642     1122344677889999999998               


Q ss_pred             ccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc---cCCHHHHHHHHHHHHHHHHH
Q psy9184         335 LKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK---YRSPNQTYAMILQVVFSLAV  411 (562)
Q Consensus       335 ~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~---~l~e~~i~~I~~QIl~aL~y  411 (562)
                                 |||+++++.|.+             ++.+|+||||+.||++.+.+.   .+++..++.++.||+.||+|
T Consensus        61 -----------~~i~~~~~~~~~-------------~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~i~~qi~~aL~~  116 (350)
T cd05573          61 -----------PWIVKLYYSFQD-------------EEHLYLVMEYMPGGDLMNLLIRKDVFPEETARFYIAELVLALDS  116 (350)
T ss_pred             -----------CCccchhhheec-------------CCeEEEEEcCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHH
Confidence                       999999998875             568999999999998876653   48999999999999999999


Q ss_pred             HHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecCC---------------------
Q psy9184         412 AEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVGE---------------------  470 (562)
Q Consensus       412 LH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~~---------------------  470 (562)
                      ||+ .||+||||||+|||++.++                    .++|+|||+++.....                     
T Consensus       117 LH~-~giiH~Dlkp~NIll~~~~--------------------~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  175 (350)
T cd05573         117 VHK-LGFIHRDIKPDNILIDADG--------------------HIKLADFGLCKKMNKAKDREYYLNDSHNLLFRDNVLV  175 (350)
T ss_pred             HHH-CCeeccCCCHHHeEECCCC--------------------CEEeecCCCCccCcccCcccccccccccccccccccc
Confidence            999 7999999999999999886                    7999999999865432                     


Q ss_pred             -------------cEEEeecCCCccccCCC-CCcHHHHHHHhhcccCCCCCCCCCCChh
Q psy9184         471 -------------KICYYDLSQDEELFEGE-GDYQFDMYRMMRKQCQNNWQNFTPKNNV  515 (562)
Q Consensus       471 -------------g~v~~~l~~~pelF~g~-~~~q~dIy~lm~~~~~~~W~~~~P~tn~  515 (562)
                                   ..+++..|++||++.+. .+...|||++ |..+...+.+..|+...
T Consensus       176 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSl-G~il~ell~g~~Pf~~~  233 (350)
T cd05573         176 RRRDHKQRRVRANSTVGTPDYIAPEVLRGTPYGLECDWWSL-GVILYEMLYGFPPFYSD  233 (350)
T ss_pred             cccccccccccccccccCccccCHHHHcCCCCCCceeeEec-chhhhhhccCCCCCCCC
Confidence                         23457788999988774 5566899875 44444566677776443

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the

>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases

Probab=99.94  E-value=1.2e-26  Score=239.53  Aligned_cols=220  Identities=15%  Similarity=0.149  Sum_probs=161.4

Q ss_pred             eeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCcccccccccccCC
Q psy9184         269 IGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTELLKCSCVRG  342 (562)
Q Consensus       269 LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~l~~~~iv~g  342 (562)
                      ||+|+||.||+|      +.||+|++....     .........+.+|+.+++.++|                       
T Consensus         1 lg~G~~g~Vy~~~~~~~~~~~aiK~i~~~~-----~~~~~~~~~~~~E~~~l~~l~h-----------------------   52 (312)
T cd05585           1 IGKGSFGKVMQVRKRDTQRIYALKTIRKAH-----IVSRSEVTHTLAERTVLAQVNC-----------------------   52 (312)
T ss_pred             CCcCCCeEEEEEEECCCCCEEEEEEEEHHH-----hhhhhHHHHHHHHHHHHHhCCC-----------------------
Confidence            799999999999      689999998542     1123345677899999999998                       


Q ss_pred             CCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc---cCCHHHHHHHHHHHHHHHHHHHhhCCeE
Q psy9184         343 RYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK---YRSPNQTYAMILQVVFSLAVAEVELEFE  419 (562)
Q Consensus       343 ~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~---~l~e~~i~~I~~QIl~aL~yLH~~~~Ii  419 (562)
                         |||+++++.|..             ++.+|+||||++||++.+.+.   .+++..+..++.||+.||.|||+ .||+
T Consensus        53 ---~~iv~~~~~~~~-------------~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~-~~i~  115 (312)
T cd05585          53 ---PFIVPLKFSFQS-------------PEKLYLVLAFINGGELFHHLQREGRFDLSRARFYTAELLCALENLHK-FNVI  115 (312)
T ss_pred             ---CcEeceeeEEec-------------CCeEEEEEcCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHh-CCeE
Confidence               999999988875             568999999999998877664   48899999999999999999999 7999


Q ss_pred             eccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecC-----CcEEEeecCCCccccCCC-CCcHHH
Q psy9184         420 HRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVG-----EKICYYDLSQDEELFEGE-GDYQFD  493 (562)
Q Consensus       420 HRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~-----~g~v~~~l~~~pelF~g~-~~~q~d  493 (562)
                      ||||||+|||++.++                    .++|+|||+++....     ....++..|++||++.+. .+...|
T Consensus       116 HrDlkp~Nili~~~~--------------------~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~D  175 (312)
T cd05585         116 YRDLKPENILLDYQG--------------------HIALCDFGLCKLNMKDDDKTNTFCGTPEYLAPELLLGHGYTKAVD  175 (312)
T ss_pred             eCCCCHHHeEECCCC--------------------cEEEEECcccccCccCCCccccccCCcccCCHHHHcCCCCCCccc
Confidence            999999999998876                    799999999986432     223457789999998774 455588


Q ss_pred             HHHHhhcccCCCCCCCCCCChhhhHHHHHHHHhhcccCCCCCCCchhHHHHHHHHHHHhcCCCcCcCC
Q psy9184         494 MYRMMRKQCQNNWQNFTPKNNVFWIHYLVDKATCLKKGYQYLRAPRHQAFELLEELGQNALHFDSCYE  561 (562)
Q Consensus       494 Iy~lm~~~~~~~W~~~~P~tn~~wl~yl~~~Ll~~~~~~~~~~~~~~~~~~~l~~l~~~~l~~~s~~~  561 (562)
                      ||++.- .......+..|+........ ....+.....++..      .-..+.+|...+|.++...|
T Consensus       176 vwslGv-il~el~tg~~pf~~~~~~~~-~~~~~~~~~~~~~~------~~~~~~~li~~~L~~dp~~R  235 (312)
T cd05585         176 WWTLGV-LLYEMLTGLPPFYDENVNEM-YRKILQEPLRFPDG------FDRDAKDLLIGLLSRDPTRR  235 (312)
T ss_pred             eechhH-HHHHHHhCCCCcCCCCHHHH-HHHHHcCCCCCCCc------CCHHHHHHHHHHcCCCHHHc
Confidence            877533 33334455556533222222 22223212222221      13456777888888776654

Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl

>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2

Probab=99.94  E-value=1.4e-26  Score=245.98  Aligned_cols=140  Identities=18%  Similarity=0.322  Sum_probs=122.2

Q ss_pred             CCceeeeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCcccccc
Q psy9184         262 ALKNCKKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTELL  335 (562)
Q Consensus       262 ~y~~~~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~l~  335 (562)
                      .|+.++.||+|+||.||+|      +.||||++....     .........+.+|+.+++.++|                
T Consensus         2 ~f~~~~~LG~G~~g~Vy~~~~~~~~~~~aiK~i~~~~-----~~~~~~~~~~~~E~~il~~l~h----------------   60 (381)
T cd05626           2 MFVKIKTLGIGAFGEVCLACKVDTHALYAMKTLRKKD-----VLNRNQVAHVKAERDILAEADN----------------   60 (381)
T ss_pred             CceEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHH-----hhhhHHHHHHHHHHHHHHhcCC----------------
Confidence            5889999999999999999      789999998643     2223445678899999999998                


Q ss_pred             cccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc---cCCHHHHHHHHHHHHHHHHHH
Q psy9184         336 KCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK---YRSPNQTYAMILQVVFSLAVA  412 (562)
Q Consensus       336 ~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~---~l~e~~i~~I~~QIl~aL~yL  412 (562)
                                |||+++++.|.+             .+.+|+|||||+||++.+.+.   .+++..++.++.||+.||.||
T Consensus        61 ----------~~iv~l~~~~~~-------------~~~~~lv~E~~~gg~L~~~l~~~~~~~e~~~~~~~~qi~~aL~~L  117 (381)
T cd05626          61 ----------EWVVKLYYSFQD-------------KDNLYFVMDYIPGGDMMSLLIRMEVFPEVLARFYIAELTLAIESV  117 (381)
T ss_pred             ----------CCeeeeEEEEec-------------CCEEEEEEecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHH
Confidence                      999999999875             558999999999998876653   488999999999999999999


Q ss_pred             HhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceee
Q psy9184         413 EVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRC  466 (562)
Q Consensus       413 H~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~  466 (562)
                      |+ .||+||||||+|||++.++                    .+||+|||+++.
T Consensus       118 H~-~givHrDlKp~Nili~~~~--------------------~~kL~DFGl~~~  150 (381)
T cd05626         118 HK-MGFIHRDIKPDNILIDLDG--------------------HIKLTDFGLCTG  150 (381)
T ss_pred             Hh-CCeeecCCcHHHEEECCCC--------------------CEEEeeCcCCcc
Confidence            99 7999999999999998876                    799999999763

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po

>KOG0662|consensus

Probab=99.94  E-value=3.4e-27  Score=221.04  Aligned_cols=183  Identities=23%  Similarity=0.438  Sum_probs=150.0

Q ss_pred             CCceeeeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCcccccc
Q psy9184         262 ALKNCKKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTELL  335 (562)
Q Consensus       262 ~y~~~~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~l~  335 (562)
                      +|...++||+|+||+||+|      +.||+|.++....      ++.--...++|+.+++.++|                
T Consensus         3 ~ydkmekigegtygtvfkarn~~t~eivalkrvrlddd------degvpssalreicllkelkh----------------   60 (292)
T KOG0662|consen    3 KYDKMEKIGEGTYGTVFKARNRETHEIVALKRVRLDDD------DEGVPSSALREICLLKELKH----------------   60 (292)
T ss_pred             chHHHHhhcCCcceeeEecccCCccceEEEEEEeccCC------CCCCcHHHHHHHHHHHHhhh----------------
Confidence            4667789999999999999      8999999998642      22223467899999999999                


Q ss_pred             cccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCcccc-c----cCCHHHHHHHHHHHHHHHH
Q psy9184         336 KCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDI-K----YRSPNQTYAMILQVVFSLA  410 (562)
Q Consensus       336 ~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l-~----~l~e~~i~~I~~QIl~aL~  410 (562)
                                .|||++++....             +..+-+|+|||..  ++..+ .    .++.+.++.++.|++.||.
T Consensus        61 ----------knivrl~dvlhs-------------dkkltlvfe~cdq--dlkkyfdslng~~d~~~~rsfmlqllrgl~  115 (292)
T KOG0662|consen   61 ----------KNIVRLHDVLHS-------------DKKLTLVFEFCDQ--DLKKYFDSLNGDLDPEIVRSFMLQLLRGLG  115 (292)
T ss_pred             ----------cceeehhhhhcc-------------CceeEEeHHHhhH--HHHHHHHhcCCcCCHHHHHHHHHHHHhhhh
Confidence                      999999999875             6689999999962  33322 2    3788999999999999999


Q ss_pred             HHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecC---------------------
Q psy9184         411 VAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVG---------------------  469 (562)
Q Consensus       411 yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~---------------------  469 (562)
                      |+|+ +++.||||||+|.||+.+|                    .+||+|||+||...-                     
T Consensus       116 fchs-hnvlhrdlkpqnllin~ng--------------------elkladfglarafgipvrcysaevvtlwyrppdvlf  174 (292)
T KOG0662|consen  116 FCHS-HNVLHRDLKPQNLLINRNG--------------------ELKLADFGLARAFGIPVRCYSAEVVTLWYRPPDVLF  174 (292)
T ss_pred             hhhh-hhhhhccCCcceEEeccCC--------------------cEEecccchhhhcCCceEeeeceeeeeeccCcceee
Confidence            9999 8999999999999999998                    799999999987653                     


Q ss_pred             -------------CcEEEeecCC-CccccCCCC-CcH-HHHHHHhhcccCCCCCCCCCC
Q psy9184         470 -------------EKICYYDLSQ-DEELFEGEG-DYQ-FDMYRMMRKQCQNNWQNFTPK  512 (562)
Q Consensus       470 -------------~g~v~~~l~~-~pelF~g~~-~~q-~dIy~lm~~~~~~~W~~~~P~  512 (562)
                                   .||+++++.. +.++|.|.. +.| ..||+.+|.+..++|+.....
T Consensus       175 gakly~tsidmwsagcifaelanagrplfpg~dvddqlkrif~~lg~p~ed~wps~t~l  233 (292)
T KOG0662|consen  175 GAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEDQWPSMTKL  233 (292)
T ss_pred             eeehhccchHhhhcchHHHHHhhcCCCCCCCCcHHHHHHHHHHHhCCCccccCCccccC
Confidence                         4666666543 567888853 333 889999999999999876544

>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4

Probab=99.94  E-value=4e-26  Score=232.17  Aligned_cols=184  Identities=16%  Similarity=0.151  Sum_probs=145.1

Q ss_pred             CceeeeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCccccccc
Q psy9184         263 LKNCKKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTELLK  336 (562)
Q Consensus       263 y~~~~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~l~~  336 (562)
                      |+..+.||+|+||.||+|      +.||+|++....     .........+.+|+.+++.++|                 
T Consensus         2 f~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~-----~~~~~~~~~~~~E~~il~~l~~-----------------   59 (285)
T cd05631           2 FRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKR-----IKKRKGEAMALNEKRILEKVNS-----------------   59 (285)
T ss_pred             ceEEEEEecCCCEEEEEEEEecCCceEEEEEeeHhh-----hhhhhhHHHHHHHHHHHHhcCC-----------------
Confidence            678899999999999999      789999988643     1112233467889999999998                 


Q ss_pred             ccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc-----cCCHHHHHHHHHHHHHHHHH
Q psy9184         337 CSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK-----YRSPNQTYAMILQVVFSLAV  411 (562)
Q Consensus       337 ~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~-----~l~e~~i~~I~~QIl~aL~y  411 (562)
                               ++|+.+++.|.+             ++.+|+||||+.+|++...+.     .+++..+..++.||+.||+|
T Consensus        60 ---------~~iv~~~~~~~~-------------~~~~~lv~e~~~~g~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~  117 (285)
T cd05631          60 ---------RFVVSLAYAYET-------------KDALCLVLTIMNGGDLKFHIYNMGNPGFDEQRAIFYAAELCCGLED  117 (285)
T ss_pred             ---------CcEEEEEEEEcc-------------CCeEEEEEEecCCCcHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHH
Confidence                     999999988875             558999999999998755442     37899999999999999999


Q ss_pred             HHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecC----CcEEEeecCCCccccCC-
Q psy9184         412 AEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVG----EKICYYDLSQDEELFEG-  486 (562)
Q Consensus       412 LH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~----~g~v~~~l~~~pelF~g-  486 (562)
                      ||+ .+|+||||||+|||++.++                    .++|+|||+++....    .+.+++..|++||++.+ 
T Consensus       118 lH~-~~iiH~dikp~Nill~~~~--------------------~~kl~Dfg~~~~~~~~~~~~~~~g~~~y~aPE~~~~~  176 (285)
T cd05631         118 LQR-ERIVYRDLKPENILLDDRG--------------------HIRISDLGLAVQIPEGETVRGRVGTVGYMAPEVINNE  176 (285)
T ss_pred             HHh-CCEEeCCCCHHHEEECCCC--------------------CEEEeeCCCcEEcCCCCeecCCCCCCCccCHhhhcCC
Confidence            999 7999999999999998876                    799999999987543    22345778899999876 


Q ss_pred             CCCcHHHHHHHhhcccCCCCCCCCCC
Q psy9184         487 EGDYQFDMYRMMRKQCQNNWQNFTPK  512 (562)
Q Consensus       487 ~~~~q~dIy~lm~~~~~~~W~~~~P~  512 (562)
                      ..+...|||++.-... ....+..|+
T Consensus       177 ~~~~~~DvwslGvil~-el~~g~~pf  201 (285)
T cd05631         177 KYTFSPDWWGLGCLIY-EMIQGQSPF  201 (285)
T ss_pred             CCCcccCchhHHHHHH-HHHhCCCCC
Confidence            4455688887543332 233344444

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i

>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2

Probab=99.94  E-value=2.2e-26  Score=242.36  Aligned_cols=188  Identities=20%  Similarity=0.256  Sum_probs=152.4

Q ss_pred             CCCceeeeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCccccc
Q psy9184         261 SALKNCKKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTEL  334 (562)
Q Consensus       261 ~~y~~~~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~l  334 (562)
                      ++|+..+.||+|+||.||+|      +.||+|++....     .........+..|+.++..++|               
T Consensus         1 ~~f~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~-----~~~~~~~~~~~~e~~~l~~l~~---------------   60 (360)
T cd05627           1 DDFESLKVIGRGAFGEVRLVQKKDTGHIYAMKILRKAD-----MLEKEQVAHIRAERDILVEADG---------------   60 (360)
T ss_pred             CCceEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHH-----HhhhhhHHHHHHHHHHHHhCCC---------------
Confidence            35889999999999999999      789999998532     1123345677889999999988               


Q ss_pred             ccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc---cCCHHHHHHHHHHHHHHHHH
Q psy9184         335 LKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK---YRSPNQTYAMILQVVFSLAV  411 (562)
Q Consensus       335 ~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~---~l~e~~i~~I~~QIl~aL~y  411 (562)
                                 |+|+++++.|.+             ++.+|+|||||+||++.+.+.   .+++..++.++.||+.||+|
T Consensus        61 -----------~~iv~~~~~~~~-------------~~~~~lv~E~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~~L~~  116 (360)
T cd05627          61 -----------AWVVKMFYSFQD-------------KRNLYLIMEFLPGGDMMTLLMKKDTLSEEATQFYIAETVLAIDA  116 (360)
T ss_pred             -----------CCEeeEEEEEEc-------------CCEEEEEEeCCCCccHHHHHHhcCCCCHHHHHHHHHHHHHHHHH
Confidence                       999999998875             568999999999998877664   48999999999999999999


Q ss_pred             HHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecC----------------------
Q psy9184         412 AEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVG----------------------  469 (562)
Q Consensus       412 LH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~----------------------  469 (562)
                      ||+ .||+||||||+|||++.++                    .++|+|||+++....                      
T Consensus       117 lH~-~givHrDLkp~NIli~~~~--------------------~vkL~DfG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  175 (360)
T cd05627         117 IHQ-LGFIHRDIKPDNLLLDAKG--------------------HVKLSDFGLCTGLKKAHRTEFYRNLTHNPPSDFSFQN  175 (360)
T ss_pred             HHH-CCeEccCCCHHHEEECCCC--------------------CEEEeeccCCcccccccccccccccccCCcccccccc
Confidence            999 7999999999999998876                    799999999875421                      


Q ss_pred             ------------------CcEEEeecCCCccccCCC-CCcHHHHHHHhhcccCCCCCCCCCCCh
Q psy9184         470 ------------------EKICYYDLSQDEELFEGE-GDYQFDMYRMMRKQCQNNWQNFTPKNN  514 (562)
Q Consensus       470 ------------------~g~v~~~l~~~pelF~g~-~~~q~dIy~lm~~~~~~~W~~~~P~tn  514 (562)
                                        ...+++..|++||++.+. .+...|||++ |........+..|+..
T Consensus       176 ~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSl-Gvilyel~tG~~Pf~~  238 (360)
T cd05627         176 MNSKRKAETWKKNRRQLAYSTVGTPDYIAPEVFMQTGYNKLCDWWSL-GVIMYEMLIGYPPFCS  238 (360)
T ss_pred             cccccccccccccccccccccCCCccccCHHHHcCCCCCCcceeccc-cceeeecccCCCCCCC
Confidence                              123467789999998774 4556899875 4555566667777643

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul

>KOG0033|consensus

Probab=99.94  E-value=6e-28  Score=235.29  Aligned_cols=234  Identities=16%  Similarity=0.176  Sum_probs=177.8

Q ss_pred             CCCceeeeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCccccc
Q psy9184         261 SALKNCKKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTEL  334 (562)
Q Consensus       261 ~~y~~~~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~l  334 (562)
                      +.|++.+.||+|.|+.|++|      +.+|+|+|....      ..+..++++.+|+.|.+.|+|               
T Consensus        11 d~y~l~e~igkG~FSvVrRc~~~~tg~~fa~kiin~~k------~~~~~~e~l~rEarIC~~LqH---------------   69 (355)
T KOG0033|consen   11 DNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKK------LSARDFQKLEREARICRKLQH---------------   69 (355)
T ss_pred             hhhhHHHHHccCchHHHHHHHhccchHHHHHHHhhhhh------hccccHHHHHHHHHHHHhcCC---------------
Confidence            67899999999999999999      889999998763      334567899999999999999               


Q ss_pred             ccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCcccccc---CCHHHHHHHHHHHHHHHHH
Q psy9184         335 LKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIKY---RSPNQTYAMILQVVFSLAV  411 (562)
Q Consensus       335 ~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~~---l~e~~i~~I~~QIl~aL~y  411 (562)
                                 |||+++.+.+..             ++..|+|+|++.||++...+..   ++|..+..+++||+.||.|
T Consensus        70 -----------P~IvrL~~ti~~-------------~~~~ylvFe~m~G~dl~~eIV~R~~ySEa~aSH~~rQiLeal~y  125 (355)
T KOG0033|consen   70 -----------PNIVRLHDSIQE-------------ESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILEALAY  125 (355)
T ss_pred             -----------CcEeehhhhhcc-------------cceeEEEEecccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence                       999999998875             6689999999999999887753   8999999999999999999


Q ss_pred             HHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecC----CcEEEeecCCCccccCCC
Q psy9184         412 AEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVG----EKICYYDLSQDEELFEGE  487 (562)
Q Consensus       412 LH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~----~g~v~~~l~~~pelF~g~  487 (562)
                      +|. .+|||||+||+|+|+.....                 |.-+||+|||+|....+    .|-++++-|++||+....
T Consensus       126 CH~-n~IvHRDvkP~nllLASK~~-----------------~A~vKL~~FGvAi~l~~g~~~~G~~GtP~fmaPEvvrkd  187 (355)
T KOG0033|consen  126 CHS-NGIVHRDLKPENLLLASKAK-----------------GAAVKLADFGLAIEVNDGEAWHGFAGTPGYLSPEVLKKD  187 (355)
T ss_pred             HHh-cCceeccCChhheeeeeccC-----------------CCceeecccceEEEeCCccccccccCCCcccCHHHhhcC
Confidence            999 79999999999999988753                 23699999999998875    456679999999988764


Q ss_pred             -CCcHHHHHHHhhcccCCCCCCCCCCChhhhHHHHHHHHhhcccCCCCCCCchhHHHHHHHHHHHhcCCCcCcCC
Q psy9184         488 -GDYQFDMYRMMRKQCQNNWQNFTPKNNVFWIHYLVDKATCLKKGYQYLRAPRHQAFELLEELGQNALHFDSCYE  561 (562)
Q Consensus       488 -~~~q~dIy~lm~~~~~~~W~~~~P~tn~~wl~yl~~~Ll~~~~~~~~~~~~~~~~~~~l~~l~~~~l~~~s~~~  561 (562)
                       +.-..|||. .|..+..-..++.||...- -+-+.+........++++.-.  ..-..-+.|.++||+-+.++|
T Consensus       188 py~kpvDiW~-cGViLfiLL~G~~PF~~~~-~~rlye~I~~g~yd~~~~~w~--~is~~Ak~LvrrML~~dP~kR  258 (355)
T KOG0033|consen  188 PYSKPVDIWA-CGVILYILLVGYPPFWDED-QHRLYEQIKAGAYDYPSPEWD--TVTPEAKSLIRRMLTVNPKKR  258 (355)
T ss_pred             CCCCcchhhh-hhHHHHHHHhCCCCCCCcc-HHHHHHHHhccccCCCCcccC--cCCHHHHHHHHHHhccChhhh
Confidence             333477765 3333333335555554421 233344444434455543211  112345667778887777665

>KOG0580|consensus

Probab=99.94  E-value=5.3e-27  Score=228.23  Aligned_cols=231  Identities=16%  Similarity=0.196  Sum_probs=183.3

Q ss_pred             CCCCCceeeeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCccc
Q psy9184         259 PSSALKNCKKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFT  332 (562)
Q Consensus       259 ~~~~y~~~~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv  332 (562)
                      .-++|++++.||+|-||.||+|      -.||+|++.++.     .......+++.+|++|...|+|             
T Consensus        20 ~l~dfeigr~LgkgkFG~vYlarekks~~IvalKVlfKsq-----i~~~~v~~qlrREiEIqs~L~h-------------   81 (281)
T KOG0580|consen   20 TLDDFEIGRPLGKGKFGNVYLAREKKSLFIVALKVLFKSQ-----ILKTQVEHQLRREIEIQSHLRH-------------   81 (281)
T ss_pred             chhhccccccccCCccccEeEeeeccCCcEEEEeeeeHHH-----HHHhcchhhhhheeEeecccCC-------------
Confidence            4478999999999999999999      799999999864     2333445688899999999998             


Q ss_pred             ccccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc-----cCCHHHHHHHHHHHHH
Q psy9184         333 ELLKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK-----YRSPNQTYAMILQVVF  407 (562)
Q Consensus       333 ~l~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~-----~l~e~~i~~I~~QIl~  407 (562)
                                   |||+++|++|.+             +..+||++||...|+++..+.     .+++..++.++.|++.
T Consensus        82 -------------pnilrlY~~fhd-------------~~riyLilEya~~gel~k~L~~~~~~~f~e~~~a~Yi~q~A~  135 (281)
T KOG0580|consen   82 -------------PNILRLYGYFHD-------------SKRIYLILEYAPRGELYKDLQEGRMKRFDEQRAATYIKQLAN  135 (281)
T ss_pred             -------------ccHHhhhhheec-------------cceeEEEEEecCCchHHHHHHhcccccccccchhHHHHHHHH
Confidence                         999999999987             559999999999999988775     4899999999999999


Q ss_pred             HHHHHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecC---CcEEEeecCCCcccc
Q psy9184         408 SLAVAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVG---EKICYYDLSQDEELF  484 (562)
Q Consensus       408 aL~yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~---~g~v~~~l~~~pelF  484 (562)
                      ||.|+|. .+||||||||+|+|+...+                    .+||+|||.|.....   ...+++-.|.+||+.
T Consensus       136 Al~y~h~-k~VIhRdiKpenlLlg~~~--------------------~lkiAdfGwsV~~p~~kR~tlcgt~dyl~pEmv  194 (281)
T KOG0580|consen  136 ALLYCHL-KRVIHRDIKPENLLLGSAG--------------------ELKIADFGWSVHAPSNKRKTLCGTLDYLPPEMV  194 (281)
T ss_pred             HHHHhcc-CCcccCCCCHHHhccCCCC--------------------CeeccCCCceeecCCCCceeeecccccCCHhhc
Confidence            9999999 6999999999999999998                    699999999987753   345667788899999


Q ss_pred             CCC-CCcHHHHHHHhhcccCCCCCCCCCCChhhhHHHHHHHHhhcccCCCCCCCchhHHHHHHHHHHHhcCCCcCcCCC
Q psy9184         485 EGE-GDYQFDMYRMMRKQCQNNWQNFTPKNNVFWIHYLVDKATCLKKGYQYLRAPRHQAFELLEELGQNALHFDSCYEM  562 (562)
Q Consensus       485 ~g~-~~~q~dIy~lm~~~~~~~W~~~~P~tn~~wl~yl~~~Ll~~~~~~~~~~~~~~~~~~~l~~l~~~~l~~~s~~~~  562 (562)
                      .+. .+...|+|. +|....+..-+..||.... -.-..+++......+++.-+      .....++-.+|..++..+|
T Consensus       195 ~~~~hd~~Vd~w~-lgvl~yeflvg~ppFes~~-~~etYkrI~k~~~~~p~~is------~~a~dlI~~ll~~~p~~r~  265 (281)
T KOG0580|consen  195 EGRGHDKFVDLWS-LGVLCYEFLVGLPPFESQS-HSETYKRIRKVDLKFPSTIS------GGAADLISRLLVKNPIERL  265 (281)
T ss_pred             CCCCccchhhHHH-HHHHHHHHHhcCCchhhhh-hHHHHHHHHHccccCCcccC------hhHHHHHHHHhccCccccc
Confidence            985 555688865 5566556666777775554 55556666663344443332      2344556777777776654

>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N

Probab=99.94  E-value=4e-26  Score=236.86  Aligned_cols=188  Identities=19%  Similarity=0.213  Sum_probs=144.1

Q ss_pred             CceeeeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCccccccc
Q psy9184         263 LKNCKKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTELLK  336 (562)
Q Consensus       263 y~~~~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~l~~  336 (562)
                      |++.+.||+|+||.||+|      +.||||+++...     .......+.+.+|+.++..+..++               
T Consensus         1 y~i~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~-----~~~~~~~~~l~~e~~~~~~~~~l~---------------   60 (324)
T cd05589           1 FRCLAVLGRGHFGKVLLAEYKKTGELYAIKALKKGD-----IIARDEVESLMCEKRIFETANSER---------------   60 (324)
T ss_pred             CeEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHH-----hhhhhHHHHHHHHHHHHHhccccC---------------
Confidence            578899999999999999      789999998542     112234456777877765444211               


Q ss_pred             ccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc--cCCHHHHHHHHHHHHHHHHHHHh
Q psy9184         337 CSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK--YRSPNQTYAMILQVVFSLAVAEV  414 (562)
Q Consensus       337 ~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~--~l~e~~i~~I~~QIl~aL~yLH~  414 (562)
                              ||||++++++|..             .+.+|+||||+.||++...+.  .+++.++..++.||+.||.|||+
T Consensus        61 --------hp~i~~~~~~~~~-------------~~~~~lv~E~~~~~~L~~~~~~~~l~~~~~~~~~~qi~~al~~lH~  119 (324)
T cd05589          61 --------HPFLVNLFACFQT-------------EDHVCFVMEYAAGGDLMMHIHTDVFSEPRAVFYAACVVLGLQYLHE  119 (324)
T ss_pred             --------CCChhceeeEEEc-------------CCEEEEEEcCCCCCcHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHh
Confidence                    3999999998875             558999999999998766554  48999999999999999999999


Q ss_pred             hCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecC-----CcEEEeecCCCccccCCC-C
Q psy9184         415 ELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVG-----EKICYYDLSQDEELFEGE-G  488 (562)
Q Consensus       415 ~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~-----~g~v~~~l~~~pelF~g~-~  488 (562)
                       .||+||||||+|||++.++                    .+||+|||+++....     ...+++..|++||++.+. .
T Consensus       120 -~~ivHrdlkp~Nill~~~~--------------------~~kL~Dfg~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~  178 (324)
T cd05589         120 -NKIVYRDLKLDNLLLDTEG--------------------FVKIADFGLCKEGMGFGDRTSTFCGTPEFLAPEVLTETSY  178 (324)
T ss_pred             -CCeEecCCCHHHeEECCCC--------------------cEEeCcccCCccCCCCCCcccccccCccccCHhHhcCCCC
Confidence             7999999999999999886                    799999999875432     223456778999998774 4


Q ss_pred             CcHHHHHHHhhcccCCCCCCCCCCC
Q psy9184         489 DYQFDMYRMMRKQCQNNWQNFTPKN  513 (562)
Q Consensus       489 ~~q~dIy~lm~~~~~~~W~~~~P~t  513 (562)
                      +.+.|||++. ........+..|+.
T Consensus       179 ~~~~DiwslG-~il~el~~G~~pf~  202 (324)
T cd05589         179 TRAVDWWGLG-VLIYEMLVGESPFP  202 (324)
T ss_pred             CcccchhhHH-HHHHHHHhCCCCCC
Confidence            5568998753 33333344455553

Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved

>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase

Probab=99.93  E-value=4.9e-26  Score=236.37  Aligned_cols=188  Identities=15%  Similarity=0.195  Sum_probs=151.5

Q ss_pred             CCceeeeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCcccccc
Q psy9184         262 ALKNCKKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTELL  335 (562)
Q Consensus       262 ~y~~~~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~l~  335 (562)
                      +|.+.+.||+|+||.||+|      +.||+|+++...     .........+.+|+.+++.++|                
T Consensus         2 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~-----~~~~~~~~~~~~e~~i~~~~~~----------------   60 (330)
T cd05601           2 DFDVKSLVGRGHFGEVQVVREKATGDIYAMKVMKKSV-----LLAQETVSFFEEERDILSISNS----------------   60 (330)
T ss_pred             CceEEEEEEeccCEEEEEEEECCCCCEEEEEEEEHHH-----hhhhhHHHHHHHHHHHHHhCCC----------------
Confidence            5889999999999999999      789999998642     1123344567889999999888                


Q ss_pred             cccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc----cCCHHHHHHHHHHHHHHHHH
Q psy9184         336 KCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK----YRSPNQTYAMILQVVFSLAV  411 (562)
Q Consensus       336 ~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~----~l~e~~i~~I~~QIl~aL~y  411 (562)
                                |+|+++++.+.+             ++.+|+||||++||++.+.+.    .+++..+..++.||+.||.|
T Consensus        61 ----------~~i~~~~~~~~~-------------~~~~~lv~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~qi~~aL~~  117 (330)
T cd05601          61 ----------PWIPQLQYAFQD-------------KDNLYLVMEYQPGGDLLSLLNRYEDQFDEDMAQFYLAELVLAIHS  117 (330)
T ss_pred             ----------CCCcceeeEEec-------------CCeEEEEECCCCCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHH
Confidence                      999999988875             558999999999998877663    48899999999999999999


Q ss_pred             HHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecCCc------EEEeecCCCccccC
Q psy9184         412 AEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVGEK------ICYYDLSQDEELFE  485 (562)
Q Consensus       412 LH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~~g------~v~~~l~~~pelF~  485 (562)
                      ||+ .+|+||||||+|||++.++                    .+||+|||+++.....+      ..++..|++||++.
T Consensus       118 lH~-~~i~H~Dlkp~NIll~~~~--------------------~~kL~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~  176 (330)
T cd05601         118 VHQ-MGYVHRDIKPENVLIDRTG--------------------HIKLADFGSAARLTANKMVNSKLPVGTPDYIAPEVLT  176 (330)
T ss_pred             HHH-CCeEcccCchHheEECCCC--------------------CEEeccCCCCeECCCCCceeeecccCCccccCHHHhc
Confidence            999 7999999999999999886                    79999999998765422      23466799999886


Q ss_pred             C-------CCCcHHHHHHHhhcccCCCCCCCCCCChh
Q psy9184         486 G-------EGDYQFDMYRMMRKQCQNNWQNFTPKNNV  515 (562)
Q Consensus       486 g-------~~~~q~dIy~lm~~~~~~~W~~~~P~tn~  515 (562)
                      +       ..+..+|||++ |........+..|+...
T Consensus       177 ~~~~~~~~~~~~~~Diwsl-G~il~el~~g~~Pf~~~  212 (330)
T cd05601         177 TMNGDGKGTYGVECDWWSL-GVIAYEMIYGRSPFHEG  212 (330)
T ss_pred             cccccccCCCCCcceeecc-cceeeeeccCCCCCCCC
Confidence            3       23456899875 44444566677777543

Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor

>KOG0201|consensus

Probab=99.93  E-value=5.2e-27  Score=244.31  Aligned_cols=186  Identities=20%  Similarity=0.330  Sum_probs=162.2

Q ss_pred             CCCCCceeeeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCccc
Q psy9184         259 PSSALKNCKKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFT  332 (562)
Q Consensus       259 ~~~~y~~~~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv  332 (562)
                      +...|.....||+|+||.||+|      +.||+|++....       .....+++.+|+.+|..+++             
T Consensus        11 ~~~~~~~~~~IgrGsfG~Vyk~~d~~t~k~vAiKii~Le~-------~~deIediqqei~~Ls~~~~-------------   70 (467)
T KOG0201|consen   11 PELLYTKLELIGRGSFGEVYKAIDNKTKKVVAIKIIDLEE-------AEDEIEDIQQEISVLSQCDS-------------   70 (467)
T ss_pred             cccccccchhccccccceeeeeeeccccceEEEEEechhh-------cchhhHHHHHHHHHHHhcCc-------------
Confidence            3456778899999999999999      899999999864       34556788999999999998             


Q ss_pred             ccccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCcccccc---CCHHHHHHHHHHHHHHH
Q psy9184         333 ELLKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIKY---RSPNQTYAMILQVVFSL  409 (562)
Q Consensus       333 ~l~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~~---l~e~~i~~I~~QIl~aL  409 (562)
                                   +||.++|+.|..             +..+|++||||.||+.++.+..   +++.++..++++++.||
T Consensus        71 -------------~~it~yygsyl~-------------g~~LwiiMey~~gGsv~~lL~~~~~~~E~~i~~ilre~l~~l  124 (467)
T KOG0201|consen   71 -------------PNITEYYGSYLK-------------GTKLWIIMEYCGGGSVLDLLKSGNILDEFEIAVILREVLKGL  124 (467)
T ss_pred             -------------chHHhhhhheee-------------cccHHHHHHHhcCcchhhhhccCCCCccceeeeehHHHHHHh
Confidence                         999999988875             6689999999999999888864   58999999999999999


Q ss_pred             HHHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecC-----CcEEEeecCCCcccc
Q psy9184         410 AVAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVG-----EKICYYDLSQDEELF  484 (562)
Q Consensus       410 ~yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~-----~g~v~~~l~~~pelF  484 (562)
                      .|||. .+.+|||||+.|||+...+                    .+||+|||.|.+...     ...+++++||+||+.
T Consensus       125 ~ylH~-~~kiHrDIKaanil~s~~g--------------------~vkl~DfgVa~ql~~~~~rr~tfvGTPfwMAPEVI  183 (467)
T KOG0201|consen  125 DYLHS-EKKIHRDIKAANILLSESG--------------------DVKLADFGVAGQLTNTVKRRKTFVGTPFWMAPEVI  183 (467)
T ss_pred             hhhhh-cceecccccccceeEeccC--------------------cEEEEecceeeeeechhhccccccccccccchhhh
Confidence            99999 6999999999999999997                    799999999988775     567889999999999


Q ss_pred             CC-CCCcHHHHHHHhhccc-----CCCCCCCCC
Q psy9184         485 EG-EGDYQFDMYRMMRKQC-----QNNWQNFTP  511 (562)
Q Consensus       485 ~g-~~~~q~dIy~lm~~~~-----~~~W~~~~P  511 (562)
                      .+ .++..+|||++.-+.+     .+.|.+.+|
T Consensus       184 ~~~~Y~~KADIWSLGITaiEla~GePP~s~~hP  216 (467)
T KOG0201|consen  184 KQSGYDTKADIWSLGITAIELAKGEPPHSKLHP  216 (467)
T ss_pred             ccccccchhhhhhhhHHHHHHhcCCCCCcccCc
Confidence            98 5788899999876665     456777666

>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2

Probab=99.93  E-value=1.7e-26  Score=245.18  Aligned_cols=188  Identities=15%  Similarity=0.174  Sum_probs=150.0

Q ss_pred             CCCCceeeeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCcccc
Q psy9184         260 SSALKNCKKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTE  333 (562)
Q Consensus       260 ~~~y~~~~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~  333 (562)
                      .++|++.+.||+|+||.||+|      +.+|+|++....     .........+.+|+.+++.++|              
T Consensus        42 ~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~aiK~~~~~~-----~~~~~~~~~~~~e~~i~~~~~h--------------  102 (370)
T cd05621          42 AEDYDVVKVIGRGAFGEVQLVRHKSSQKVYAMKLLSKFE-----MIKRSDSAFFWEERDIMAFANS--------------  102 (370)
T ss_pred             HHHCeEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHH-----hhhhhhHHHHHHHHHHHHhCCC--------------
Confidence            467999999999999999999      689999997532     1122233567789999999998              


Q ss_pred             cccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc--cCCHHHHHHHHHHHHHHHHH
Q psy9184         334 LLKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK--YRSPNQTYAMILQVVFSLAV  411 (562)
Q Consensus       334 l~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~--~l~e~~i~~I~~QIl~aL~y  411 (562)
                                  |||+++++.|.+             ++.+|+|||||+||++.+.+.  .+++..+..++.||+.||+|
T Consensus       103 ------------p~iv~~~~~~~~-------------~~~~~lv~Ey~~gg~L~~~l~~~~~~~~~~~~~~~qil~aL~~  157 (370)
T cd05621         103 ------------PWVVQLFCAFQD-------------DKYLYMVMEYMPGGDLVNLMSNYDVPEKWAKFYTAEVVLALDA  157 (370)
T ss_pred             ------------CCEeeEEEEEEc-------------CCEEEEEEcCCCCCcHHHHHHhcCCCHHHHHHHHHHHHHHHHH
Confidence                        999999999875             568999999999998877664  37899999999999999999


Q ss_pred             HHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecCC------cEEEeecCCCccccC
Q psy9184         412 AEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVGE------KICYYDLSQDEELFE  485 (562)
Q Consensus       412 LH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~~------g~v~~~l~~~pelF~  485 (562)
                      ||+ .+|+||||||+|||++.++                    .+||+|||+|+.....      ..+++..|++||++.
T Consensus       158 LH~-~~IvHrDLKp~NILl~~~~--------------------~~kL~DFG~a~~~~~~~~~~~~~~~gt~~Y~aPE~~~  216 (370)
T cd05621         158 IHS-MGLIHRDVKPDNMLLDKHG--------------------HLKLADFGTCMKMDETGMVRCDTAVGTPDYISPEVLK  216 (370)
T ss_pred             HHH-CCeEecCCCHHHEEECCCC--------------------CEEEEecccceecccCCceecccCCCCcccCCHHHHh
Confidence            999 7999999999999999876                    7999999999876432      334677899999987


Q ss_pred             CC-----CCcHHHHHHHhhcccCCCCCCCCCCC
Q psy9184         486 GE-----GDYQFDMYRMMRKQCQNNWQNFTPKN  513 (562)
Q Consensus       486 g~-----~~~q~dIy~lm~~~~~~~W~~~~P~t  513 (562)
                      +.     ...+.|+|++ |..+...+.+..|+.
T Consensus       217 ~~~~~~~~~~~~DiwSl-G~ilyell~G~~Pf~  248 (370)
T cd05621         217 SQGGDGYYGRECDWWSV-GVFLFEMLVGDTPFY  248 (370)
T ss_pred             ccCCCCCCCcccCEEee-hHHHHHHHhCCCCCC
Confidence            53     2345788764 333334445555654

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found

>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase

Probab=99.93  E-value=4.2e-26  Score=236.75  Aligned_cols=224  Identities=17%  Similarity=0.172  Sum_probs=162.2

Q ss_pred             eeeeeccCceEEEEE---------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCccccccc
Q psy9184         266 CKKIGEGVYGEVFKL---------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTELLK  336 (562)
Q Consensus       266 ~~~LG~GsfG~Vyka---------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~l~~  336 (562)
                      ++.||+|+||.||+|         +.||+|++.....    .........+..|+.+++.++|                 
T Consensus         1 ~~~lg~G~~g~V~~~~~~~~~~~~~~~avK~~~~~~~----~~~~~~~~~~~~E~~il~~l~h-----------------   59 (323)
T cd05584           1 LKVLGKGGYGKVFQVRKVTGADTGKIFAMKVLKKATI----VRNQKDTAHTKAERNILEAVKH-----------------   59 (323)
T ss_pred             CceeeecCCeEEEEEEEcccCCCCCEEEEEEEEHHHH----HhhhhhHHHHHHHHHHHHhCCC-----------------
Confidence            368999999999998         5799999985421    1122334567889999999998                 


Q ss_pred             ccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc---cCCHHHHHHHHHHHHHHHHHHH
Q psy9184         337 CSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK---YRSPNQTYAMILQVVFSLAVAE  413 (562)
Q Consensus       337 ~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~---~l~e~~i~~I~~QIl~aL~yLH  413 (562)
                               |||+++++.|..             ++.+|+||||+.||++.+.+.   .+++..+..++.||+.||.|||
T Consensus        60 ---------p~iv~~~~~~~~-------------~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH  117 (323)
T cd05584          60 ---------PFIVDLIYAFQT-------------GGKLYLILEYLSGGELFMHLEREGIFMEDTACFYLSEISLALEHLH  117 (323)
T ss_pred             ---------CchhceeeEEec-------------CCeEEEEEeCCCCchHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHH
Confidence                     999999988875             558999999999998877664   3788999999999999999999


Q ss_pred             hhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecCC-----cEEEeecCCCccccCCC-
Q psy9184         414 VELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVGE-----KICYYDLSQDEELFEGE-  487 (562)
Q Consensus       414 ~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~~-----g~v~~~l~~~pelF~g~-  487 (562)
                      + .||+||||||+|||++.++                    .+||+|||+++.....     ...++..|++||++.+. 
T Consensus       118 ~-~~ivH~dlkp~Nil~~~~~--------------------~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~  176 (323)
T cd05584         118 Q-QGIIYRDLKPENILLDAQG--------------------HVKLTDFGLCKESIHEGTVTHTFCGTIEYMAPEILMRSG  176 (323)
T ss_pred             H-CCeecCCCCHHHeEECCCC--------------------CEEEeeCcCCeecccCCCcccccCCCccccChhhccCCC
Confidence            9 7999999999999998886                    7999999999864321     22356778999998774 


Q ss_pred             CCcHHHHHHHhhcccCCCCCCCCCCChhhhHHHHHHHHhhcccCCCCCCCchhHHHHHHHHHHHhcCCCcCcCC
Q psy9184         488 GDYQFDMYRMMRKQCQNNWQNFTPKNNVFWIHYLVDKATCLKKGYQYLRAPRHQAFELLEELGQNALHFDSCYE  561 (562)
Q Consensus       488 ~~~q~dIy~lm~~~~~~~W~~~~P~tn~~wl~yl~~~Ll~~~~~~~~~~~~~~~~~~~l~~l~~~~l~~~s~~~  561 (562)
                      .+...|||++ |......+.+..|+........ ...++.....++...      -..+..|.+++|..+...|
T Consensus       177 ~~~~~Diwsl-G~il~ell~G~~pf~~~~~~~~-~~~~~~~~~~~~~~~------~~~~~~li~~~l~~~p~~R  242 (323)
T cd05584         177 HGKAVDWWSL-GALMYDMLTGAPPFTAENRKKT-IDKILKGKLNLPPYL------TPEARDLLKKLLKRNPSSR  242 (323)
T ss_pred             CCCcceeccc-HHHHHHHhcCCCCCCCCCHHHH-HHHHHcCCCCCCCCC------CHHHHHHHHHHcccCHhHc
Confidence            4556899875 4444455666667654432222 233333122222211      2355666777776654443

Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in

>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C

Probab=99.93  E-value=3.3e-26  Score=238.34  Aligned_cols=224  Identities=16%  Similarity=0.186  Sum_probs=160.4

Q ss_pred             eeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCccccccccccc
Q psy9184         267 KKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTELLKCSCV  340 (562)
Q Consensus       267 ~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~l~~~~iv  340 (562)
                      +.||+|+||.||+|      +.||+|+++...     .........+..|..+++.+.+                     
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~i~~~~-----~~~~~~~~~~~~e~~il~~~~~---------------------   54 (329)
T cd05588           1 RVIGRGSYAKVLLVELKKTRRIYAMKVIKKEL-----VNDDEDIDWVQTEKHVFETASN---------------------   54 (329)
T ss_pred             CeEeeCCCeEEEEEEECCCCCEEEEEEEEHHH-----hhhhhHHHHHHHHHHHHHhccC---------------------
Confidence            46999999999999      789999998643     1123344567889999999864                     


Q ss_pred             CCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc---cCCHHHHHHHHHHHHHHHHHHHhhCC
Q psy9184         341 RGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK---YRSPNQTYAMILQVVFSLAVAEVELE  417 (562)
Q Consensus       341 ~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~---~l~e~~i~~I~~QIl~aL~yLH~~~~  417 (562)
                          ||||+++++.|.+             .+.+|+|||||+||++...+.   .+++..++.++.||+.||.|||+ .|
T Consensus        55 ----hp~Iv~~~~~~~~-------------~~~~~lv~e~~~~g~L~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~-~~  116 (329)
T cd05588          55 ----HPFLVGLHSCFQT-------------ESRLFFVIEFVSGGDLMFHMQRQRKLPEEHARFYSAEISLALNFLHE-RG  116 (329)
T ss_pred             ----CCCCCceEEEEEc-------------CCEEEEEEeCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHH-CC
Confidence                4999999998875             558999999999998766553   48999999999999999999999 79


Q ss_pred             eEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecC-----CcEEEeecCCCccccCCC-CCcH
Q psy9184         418 FEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVG-----EKICYYDLSQDEELFEGE-GDYQ  491 (562)
Q Consensus       418 IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~-----~g~v~~~l~~~pelF~g~-~~~q  491 (562)
                      |+||||||+|||++.++                    .+||+|||+++....     ...+++..|++||++.+. .+..
T Consensus       117 ivH~dlkp~Nili~~~~--------------------~~kL~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~  176 (329)
T cd05588         117 IIYRDLKLDNVLLDAEG--------------------HIKLTDYGMCKEGIRPGDTTSTFCGTPNYIAPEILRGEDYGFS  176 (329)
T ss_pred             eEecCCCHHHeEECCCC--------------------CEEECcCccccccccCCCccccccCCccccCHHHHcCCCCCCc
Confidence            99999999999999886                    799999999975322     123456778999998874 4556


Q ss_pred             HHHHHHhhcccCCCCCCCCCCC--------hhhhHHHHHHHHhhcccCCCCCCCchhHHHHHHHHHHHhcCCCcCcCC
Q psy9184         492 FDMYRMMRKQCQNNWQNFTPKN--------NVFWIHYLVDKATCLKKGYQYLRAPRHQAFELLEELGQNALHFDSCYE  561 (562)
Q Consensus       492 ~dIy~lm~~~~~~~W~~~~P~t--------n~~wl~yl~~~Ll~~~~~~~~~~~~~~~~~~~l~~l~~~~l~~~s~~~  561 (562)
                      .|+|++.-... ..+.+..|+.        ...-..++.+.++.....++..      .-..+..|.++||.++...|
T Consensus       177 ~DiwslG~~l~-el~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~------~~~~~~~li~~~L~~dP~~R  247 (329)
T cd05588         177 VDWWALGVLMF-EMMAGRSPFDIVGMSDNPDQNTEDYLFQVILEKQIRIPRS------LSVKASSVLKGFLNKDPKER  247 (329)
T ss_pred             cceechHHHHH-HHHHCCCCcccccccccccccchHHHHHHHHcCCCCCCCC------CCHHHHHHHHHHhccCHHHc
Confidence            88887543322 2233333331        1111223334444411122211      12356777888888777665

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl

>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases

Probab=99.93  E-value=7.1e-26  Score=236.06  Aligned_cols=188  Identities=15%  Similarity=0.188  Sum_probs=149.1

Q ss_pred             CCCceeeeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCccccc
Q psy9184         261 SALKNCKKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTEL  334 (562)
Q Consensus       261 ~~y~~~~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~l  334 (562)
                      ++|++.+.||+|+||.||++      +.||+|++....     .........+.+|+.+++.++|               
T Consensus         1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~-----~~~~~~~~~~~~e~~~l~~~~~---------------   60 (331)
T cd05597           1 DDFEILKVIGRGAFGEVAVVKMKNTGQVYAMKILNKWE-----MLKRAETACFREERDVLVNGDR---------------   60 (331)
T ss_pred             CCceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHH-----HhhhhhHHHHHHHHHHHHhCCC---------------
Confidence            36899999999999999999      789999997532     1123334567889999999988               


Q ss_pred             ccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc----cCCHHHHHHHHHHHHHHHH
Q psy9184         335 LKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK----YRSPNQTYAMILQVVFSLA  410 (562)
Q Consensus       335 ~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~----~l~e~~i~~I~~QIl~aL~  410 (562)
                                 ++|+.+++.|.+             ++.+|+||||+.||++.+.+.    .+++..+..++.||+.||+
T Consensus        61 -----------~~i~~~~~~~~~-------------~~~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~  116 (331)
T cd05597          61 -----------RWITNLHYAFQD-------------ENNLYLVMDYYVGGDLLTLLSKFEDRLPEDMARFYLAEMVLAID  116 (331)
T ss_pred             -----------CCCCceEEEEec-------------CCeEEEEEecCCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHH
Confidence                       999999998875             568999999999998877663    3889999999999999999


Q ss_pred             HHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecCC------cEEEeecCCCcccc
Q psy9184         411 VAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVGE------KICYYDLSQDEELF  484 (562)
Q Consensus       411 yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~~------g~v~~~l~~~pelF  484 (562)
                      |||+ .+|+||||||+|||++.++                    .+||+|||+++.....      ..+++..|++||++
T Consensus       117 ~lH~-~~ivH~dlkp~Nill~~~~--------------------~~kl~Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE~~  175 (331)
T cd05597         117 SVHQ-LGYVHRDIKPDNVLLDKNG--------------------HIRLADFGSCLRLLADGTVQSNVAVGTPDYISPEIL  175 (331)
T ss_pred             HHHh-CCeEECCCCHHHEEECCCC--------------------CEEEEECCceeecCCCCCccccceeccccccCHHHH
Confidence            9999 7999999999999998876                    7999999999876432      13467789999998


Q ss_pred             CC------CCCcHHHHHHHhhcccCCCCCCCCCCCh
Q psy9184         485 EG------EGDYQFDMYRMMRKQCQNNWQNFTPKNN  514 (562)
Q Consensus       485 ~g------~~~~q~dIy~lm~~~~~~~W~~~~P~tn  514 (562)
                      .+      ....+.|||++. ......+.+..|+..
T Consensus       176 ~~~~~~~~~~~~~~DiwslG-~~l~el~~g~~Pf~~  210 (331)
T cd05597         176 QAMEDGKGRYGPECDWWSLG-VCMYEMLYGETPFYA  210 (331)
T ss_pred             hhccccccCCCCcceeehhh-hHHHHHhhCCCCCCC
Confidence            63      234458888753 333344455666543

Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,

>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta

Probab=99.93  E-value=4.1e-26  Score=236.78  Aligned_cols=223  Identities=14%  Similarity=0.129  Sum_probs=159.7

Q ss_pred             eeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCccccccccccc
Q psy9184         267 KKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTELLKCSCV  340 (562)
Q Consensus       267 ~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~l~~~~iv  340 (562)
                      +.||+|+||.||+|      +.||+|++....     .........+..|..+++.+.+                     
T Consensus         1 ~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~-----~~~~~~~~~~~~e~~~l~~~~~---------------------   54 (320)
T cd05590           1 RVLGKGSFGKVMLARLKESGRLYAVKVLKKDV-----ILQDDDVECTMTEKRILSLARN---------------------   54 (320)
T ss_pred             CeeeeCCCeEEEEEEEcCCCCEEEEEEEEHHH-----HhhccHHHHHHHHHHHHHhccC---------------------
Confidence            46999999999999      689999998542     1122344567789999888754                     


Q ss_pred             CCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc---cCCHHHHHHHHHHHHHHHHHHHhhCC
Q psy9184         341 RGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK---YRSPNQTYAMILQVVFSLAVAEVELE  417 (562)
Q Consensus       341 ~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~---~l~e~~i~~I~~QIl~aL~yLH~~~~  417 (562)
                          ||||+++++.|..             .+.+|+||||++||++...+.   .+++..+..++.||+.||.|||+ .+
T Consensus        55 ----h~~iv~~~~~~~~-------------~~~~~iv~Ey~~~g~L~~~i~~~~~l~~~~~~~~~~ql~~~L~~lH~-~~  116 (320)
T cd05590          55 ----HPFLTQLYCCFQT-------------PDRLFFVMEFVNGGDLMFHIQKSRRFDEARARFYAAEITSALMFLHD-KG  116 (320)
T ss_pred             ----CCchhceeeEEEc-------------CCEEEEEEcCCCCchHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHH-CC
Confidence                4999999998875             568999999999998876553   48999999999999999999999 79


Q ss_pred             eEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecC-----CcEEEeecCCCccccCCC-CCcH
Q psy9184         418 FEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVG-----EKICYYDLSQDEELFEGE-GDYQ  491 (562)
Q Consensus       418 IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~-----~g~v~~~l~~~pelF~g~-~~~q  491 (562)
                      |+||||||+|||++.++                    .++|+|||+++....     ....++..|++||++.+. .+..
T Consensus       117 ivH~dlkp~NIli~~~~--------------------~~kL~DfG~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~  176 (320)
T cd05590         117 IIYRDLKLDNVLLDHEG--------------------HCKLADFGMCKEGIFNGKTTSTFCGTPDYIAPEILQEMLYGPS  176 (320)
T ss_pred             eEeCCCCHHHeEECCCC--------------------cEEEeeCCCCeecCcCCCcccccccCccccCHHHHcCCCCCCc
Confidence            99999999999999886                    799999999886432     223456778999998764 4556


Q ss_pred             HHHHHHhhcccCCCCCCCCCCChhhhHHHHHHHHhhcccCCCCCCCchhHHHHHHHHHHHhcCCCcCcCC
Q psy9184         492 FDMYRMMRKQCQNNWQNFTPKNNVFWIHYLVDKATCLKKGYQYLRAPRHQAFELLEELGQNALHFDSCYE  561 (562)
Q Consensus       492 ~dIy~lm~~~~~~~W~~~~P~tn~~wl~yl~~~Ll~~~~~~~~~~~~~~~~~~~l~~l~~~~l~~~s~~~  561 (562)
                      .|||++.-.. .....+..|+....... +....+.....++..      .-..+.+|.+.+|+.+...|
T Consensus       177 ~DiwslG~il-~el~~g~~Pf~~~~~~~-~~~~i~~~~~~~~~~------~~~~~~~li~~~L~~dP~~R  238 (320)
T cd05590         177 VDWWAMGVLL-YEMLCGHAPFEAENEDD-LFEAILNDEVVYPTW------LSQDAVDILKAFMTKNPTMR  238 (320)
T ss_pred             cchhhhHHHH-HHHhhCCCCCCCCCHHH-HHHHHhcCCCCCCCC------CCHHHHHHHHHHcccCHHHC
Confidence            8998764333 23334555553322111 122233212222221      13356677788887766544

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal

>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon

Probab=99.93  E-value=4.5e-26  Score=236.14  Aligned_cols=223  Identities=15%  Similarity=0.121  Sum_probs=158.2

Q ss_pred             eeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCccccccccccc
Q psy9184         267 KKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTELLKCSCV  340 (562)
Q Consensus       267 ~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~l~~~~iv  340 (562)
                      +.||+|+||.||+|      +.||+|++....     .........+..|..+++.+.+                     
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~-----~~~~~~~~~~~~e~~il~~~~~---------------------   54 (321)
T cd05591           1 KVLGKGSFGKVMLAELKGTDEVYAIKVLKKDV-----ILQDDDVDCTMTEKRILALAAK---------------------   54 (321)
T ss_pred             CccccCCCeEEEEEEECCCCCEEEEEEEeHHH-----hhhhhHHHHHHHHHHHHHhccC---------------------
Confidence            46999999999999      689999998642     1123344567789999987755                     


Q ss_pred             CCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc---cCCHHHHHHHHHHHHHHHHHHHhhCC
Q psy9184         341 RGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK---YRSPNQTYAMILQVVFSLAVAEVELE  417 (562)
Q Consensus       341 ~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~---~l~e~~i~~I~~QIl~aL~yLH~~~~  417 (562)
                          ||+|+++++.|..             ++.+|+||||++||++...+.   .+++..+..++.||+.||.|||+ .|
T Consensus        55 ----hp~i~~~~~~~~~-------------~~~~~lv~E~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~-~~  116 (321)
T cd05591          55 ----HPFLTALHCCFQT-------------KDRLFFVMEYVNGGDLMFQIQRSRKFDEPRSRFYAAEVTLALMFLHR-HG  116 (321)
T ss_pred             ----CCCccceeeEEEc-------------CCeEEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHH-CC
Confidence                5999999999875             558999999999998866553   48899999999999999999999 79


Q ss_pred             eEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecC-----CcEEEeecCCCccccCC-CCCcH
Q psy9184         418 FEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVG-----EKICYYDLSQDEELFEG-EGDYQ  491 (562)
Q Consensus       418 IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~-----~g~v~~~l~~~pelF~g-~~~~q  491 (562)
                      |+||||||+|||++.++                    .++|+|||+++....     ....++..|++||++.+ ..+.+
T Consensus       117 ivHrDikp~Nill~~~~--------------------~~kL~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~  176 (321)
T cd05591         117 VIYRDLKLDNILLDAEG--------------------HCKLADFGMCKEGILNGVTTTTFCGTPDYIAPEILQELEYGPS  176 (321)
T ss_pred             eeccCCCHHHeEECCCC--------------------CEEEeecccceecccCCccccccccCccccCHHHHcCCCCCCc
Confidence            99999999999999886                    799999999986432     22335677899998876 34556


Q ss_pred             HHHHHHhhcccCCCCCCCCCCChhhhHHHHHHHHhhcccCCCCCCCchhHHHHHHHHHHHhcCCCcCcCC
Q psy9184         492 FDMYRMMRKQCQNNWQNFTPKNNVFWIHYLVDKATCLKKGYQYLRAPRHQAFELLEELGQNALHFDSCYE  561 (562)
Q Consensus       492 ~dIy~lm~~~~~~~W~~~~P~tn~~wl~yl~~~Ll~~~~~~~~~~~~~~~~~~~l~~l~~~~l~~~s~~~  561 (562)
                      .|||++.-. ......+..|+........ ..........++...      -..+.+|...+|+.+...|
T Consensus       177 ~DvwslG~i-l~el~tg~~Pf~~~~~~~~-~~~i~~~~~~~p~~~------~~~~~~ll~~~L~~dp~~R  238 (321)
T cd05591         177 VDWWALGVL-MYEMMAGQPPFEADNEDDL-FESILHDDVLYPVWL------SKEAVSILKAFMTKNPNKR  238 (321)
T ss_pred             cceechhHH-HHHHhcCCCCCCCCCHHHH-HHHHHcCCCCCCCCC------CHHHHHHHHHHhccCHHHc
Confidence            888875333 3344455566543321222 222232122222211      2345566677776655443

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to

>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta

Probab=99.93  E-value=9.2e-26  Score=234.82  Aligned_cols=224  Identities=17%  Similarity=0.199  Sum_probs=162.2

Q ss_pred             eeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCccccccccccc
Q psy9184         267 KKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTELLKCSCV  340 (562)
Q Consensus       267 ~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~l~~~~iv  340 (562)
                      +.||+|+||.||+|      +.||+|++....     .........+.+|+.++..+.+                     
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~-----~~~~~~~~~~~~e~~~~~~~~~---------------------   54 (327)
T cd05617           1 RVIGRGSYAKVLLVRLKKNDQIYAMKVVKKEL-----VHDDEDIDWVQTEKHVFEQASS---------------------   54 (327)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHH-----hhhhhHHHHHHHHHHHHHhhcC---------------------
Confidence            47999999999999      789999998653     2223445678899999999876                     


Q ss_pred             CCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc---cCCHHHHHHHHHHHHHHHHHHHhhCC
Q psy9184         341 RGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK---YRSPNQTYAMILQVVFSLAVAEVELE  417 (562)
Q Consensus       341 ~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~---~l~e~~i~~I~~QIl~aL~yLH~~~~  417 (562)
                          ||+|+.+++.|..             .+.+|+||||++||++...+.   .+++..++.++.||+.||+|||+ .|
T Consensus        55 ----~~~i~~~~~~~~~-------------~~~~~lv~e~~~~~~L~~~~~~~~~l~~~~~~~~~~qi~~al~~lH~-~~  116 (327)
T cd05617          55 ----NPFLVGLHSCFQT-------------TSRLFLVIEYVNGGDLMFHMQRQRKLPEEHARFYAAEICIALNFLHE-RG  116 (327)
T ss_pred             ----CCCEeeEEEEEEe-------------CCEEEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHH-CC
Confidence                5999999998875             558999999999998866553   48999999999999999999999 79


Q ss_pred             eEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecC-----CcEEEeecCCCccccCC-CCCcH
Q psy9184         418 FEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVG-----EKICYYDLSQDEELFEG-EGDYQ  491 (562)
Q Consensus       418 IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~-----~g~v~~~l~~~pelF~g-~~~~q  491 (562)
                      |+||||||+|||++.++                    .+||+|||+++....     ...+++..|++||++.+ ..+..
T Consensus       117 ivHrDlkp~Nili~~~~--------------------~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~  176 (327)
T cd05617         117 IIYRDLKLDNVLLDADG--------------------HIKLTDYGMCKEGLGPGDTTSTFCGTPNYIAPEILRGEEYGFS  176 (327)
T ss_pred             eeccCCCHHHEEEeCCC--------------------CEEEeccccceeccCCCCceecccCCcccCCHHHHCCCCCCch
Confidence            99999999999999886                    799999999986322     22345678899998876 45566


Q ss_pred             HHHHHHhhcccCCCCCCCCCCC------hhhhHHHHHHHHhhcccCCCCCCCchhHHHHHHHHHHHhcCCCcCcCC
Q psy9184         492 FDMYRMMRKQCQNNWQNFTPKN------NVFWIHYLVDKATCLKKGYQYLRAPRHQAFELLEELGQNALHFDSCYE  561 (562)
Q Consensus       492 ~dIy~lm~~~~~~~W~~~~P~t------n~~wl~yl~~~Ll~~~~~~~~~~~~~~~~~~~l~~l~~~~l~~~s~~~  561 (562)
                      .|||++. ..+...+.+..|+.      ......++.+.++.....++..-      -..+..+..++|.++...|
T Consensus       177 ~DiwslG-vil~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~------~~~~~~li~~~L~~dP~~R  245 (327)
T cd05617         177 VDWWALG-VLMFEMMAGRSPFDIITDNPDMNTEDYLFQVILEKPIRIPRFL------SVKASHVLKGFLNKDPKER  245 (327)
T ss_pred             heeehhH-HHHHHHHhCCCCCCccCCCcccccHHHHHHHHHhCCCCCCCCC------CHHHHHHHHHHhccCHHHc
Confidence            8888753 33323334444441      11223344444444112222211      2345667777787766554

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways

>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha

Probab=99.93  E-value=6.7e-26  Score=235.45  Aligned_cols=187  Identities=17%  Similarity=0.196  Sum_probs=146.5

Q ss_pred             CCceeeeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCcccccc
Q psy9184         262 ALKNCKKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTELL  335 (562)
Q Consensus       262 ~y~~~~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~l~  335 (562)
                      +|...+.||+|+||.||+|      +.||+|++....     .......+.+..|+.+++.+.|                
T Consensus         1 ~f~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~-----~~~~~~~~~~~~e~~~l~~~~~----------------   59 (323)
T cd05615           1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDV-----VIQDDDVECTMVEKRVLALQDK----------------   59 (323)
T ss_pred             CceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHH-----hhhhhHHHHHHHHHHHHHhccC----------------
Confidence            3677899999999999999      689999998642     1122334567789999999988                


Q ss_pred             cccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc---cCCHHHHHHHHHHHHHHHHHH
Q psy9184         336 KCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK---YRSPNQTYAMILQVVFSLAVA  412 (562)
Q Consensus       336 ~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~---~l~e~~i~~I~~QIl~aL~yL  412 (562)
                               |++|+.+++.|..             ++.+|+||||++||++...+.   .+++.++..++.||+.||.||
T Consensus        60 ---------~~~i~~~~~~~~~-------------~~~~~lv~Ey~~~g~L~~~i~~~~~l~~~~~~~i~~qi~~al~~l  117 (323)
T cd05615          60 ---------PPFLTQLHSCFQT-------------VDRLYFVMEYVNGGDLMYHIQQVGKFKEPQAVFYAAEISVGLFFL  117 (323)
T ss_pred             ---------CCchhheeeEEec-------------CCEEEEEEcCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHH
Confidence                     6888889888875             558999999999998776653   489999999999999999999


Q ss_pred             HhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecCC-----cEEEeecCCCccccCCC
Q psy9184         413 EVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVGE-----KICYYDLSQDEELFEGE  487 (562)
Q Consensus       413 H~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~~-----g~v~~~l~~~pelF~g~  487 (562)
                      |+ .||+||||||+|||++.++                    .++|+|||+++.....     ...++..|++||++.+.
T Consensus       118 H~-~~ivHrDikp~Nill~~~~--------------------~ikL~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~  176 (323)
T cd05615         118 HR-RGIIYRDLKLDNVMLDSEG--------------------HIKIADFGMCKEHMVDGVTTRTFCGTPDYIAPEIIAYQ  176 (323)
T ss_pred             HH-CCeeccCCCHHHeEECCCC--------------------CEEEeccccccccCCCCccccCccCCccccCHHHHcCC
Confidence            99 7999999999999999886                    7999999999864321     22356778999988764


Q ss_pred             -CCcHHHHHHHhhcccCCCCCCCCCCC
Q psy9184         488 -GDYQFDMYRMMRKQCQNNWQNFTPKN  513 (562)
Q Consensus       488 -~~~q~dIy~lm~~~~~~~W~~~~P~t  513 (562)
                       .+...|||++.-... ....+..|+.
T Consensus       177 ~~~~~~DiwslGvil~-elltG~~pf~  202 (323)
T cd05615         177 PYGKSVDWWAYGVLLY-EMLAGQPPFD  202 (323)
T ss_pred             CCCCccchhhhHHHHH-HHHhCCCCCC
Confidence             455689987543332 3334455553

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a

>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota

Probab=99.93  E-value=5.3e-26  Score=236.95  Aligned_cols=224  Identities=17%  Similarity=0.184  Sum_probs=160.0

Q ss_pred             eeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCccccccccccc
Q psy9184         267 KKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTELLKCSCV  340 (562)
Q Consensus       267 ~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~l~~~~iv  340 (562)
                      +.||+|+||.||+|      +.||+|++....     .........+..|+.++..+.+                     
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~-----~~~~~~~~~~~~E~~~l~~~~~---------------------   54 (329)
T cd05618           1 RVIGRGSYAKVLLVRLKKTERIYAMKVVKKEL-----VNDDEDIDWVQTEKHVFEQASN---------------------   54 (329)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEhhH-----hcchhHHHHHHHHHHHHHhcCC---------------------
Confidence            46999999999999      789999998653     1123344567889999888754                     


Q ss_pred             CCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc---cCCHHHHHHHHHHHHHHHHHHHhhCC
Q psy9184         341 RGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK---YRSPNQTYAMILQVVFSLAVAEVELE  417 (562)
Q Consensus       341 ~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~---~l~e~~i~~I~~QIl~aL~yLH~~~~  417 (562)
                          ||||++++++|..             ++.+|+||||+++|++...+.   .+++..++.++.||+.||.|||+ .+
T Consensus        55 ----hp~iv~~~~~~~~-------------~~~~~lv~E~~~~~~L~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH~-~~  116 (329)
T cd05618          55 ----HPFLVGLHSCFQT-------------ESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHE-RG  116 (329)
T ss_pred             ----CCcCCceeeEEEe-------------CCEEEEEEeCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHH-CC
Confidence                4999999998875             568999999999998766553   48999999999999999999999 79


Q ss_pred             eEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecC-----CcEEEeecCCCccccCCC-CCcH
Q psy9184         418 FEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVG-----EKICYYDLSQDEELFEGE-GDYQ  491 (562)
Q Consensus       418 IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~-----~g~v~~~l~~~pelF~g~-~~~q  491 (562)
                      |+||||||+|||++.++                    .+||+|||+++....     ....++..|++||++.+. .+..
T Consensus       117 ivH~Dikp~Nili~~~~--------------------~~kL~DfG~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~  176 (329)
T cd05618         117 IIYRDLKLDNVLLDSEG--------------------HIKLTDYGMCKEGLRPGDTTSTFCGTPNYIAPEILRGEDYGFS  176 (329)
T ss_pred             eeeCCCCHHHEEECCCC--------------------CEEEeeCCccccccCCCCccccccCCccccCHHHHcCCCCCCc
Confidence            99999999999999886                    799999999986432     223456788999988764 4556


Q ss_pred             HHHHHHhhcccCCCCCCCCCCC--------hhhhHHHHHHHHhhcccCCCCCCCchhHHHHHHHHHHHhcCCCcCcCC
Q psy9184         492 FDMYRMMRKQCQNNWQNFTPKN--------NVFWIHYLVDKATCLKKGYQYLRAPRHQAFELLEELGQNALHFDSCYE  561 (562)
Q Consensus       492 ~dIy~lm~~~~~~~W~~~~P~t--------n~~wl~yl~~~Ll~~~~~~~~~~~~~~~~~~~l~~l~~~~l~~~s~~~  561 (562)
                      .|+|++.-... ..+.+..|+.        ......++.+..+.....++..-      ...+..|.+++|.++...|
T Consensus       177 ~DiwslG~il~-el~~g~~Pf~~~~~~~~~~~~~~~~~~~~i~~~~~~~p~~~------~~~~~~ll~~~L~~dP~~R  247 (329)
T cd05618         177 VDWWALGVLMF-EMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIPRSL------SVKAASVLKSFLNKDPKER  247 (329)
T ss_pred             cceecccHHHH-HHhhCCCCCccCCCcCCcccccHHHHHHHHhcCCCCCCCCC------CHHHHHHHHHHhcCCHHHc
Confidence            88877533322 2333334431        11112333344443222233221      2356677788887776554

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o

>KOG0574|consensus

Probab=99.93  E-value=1.9e-27  Score=237.09  Aligned_cols=172  Identities=22%  Similarity=0.332  Sum_probs=151.6

Q ss_pred             CCCceeeeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCccccc
Q psy9184         261 SALKNCKKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTEL  334 (562)
Q Consensus       261 ~~y~~~~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~l  334 (562)
                      +-|.++.+||+|+||.||+|      +.+|||.++...          .++++..|+.||+.++.               
T Consensus        33 EVFDi~~KLGEGSYGSV~KAIH~EsG~v~AIK~VPV~s----------DLQEIIKEISIMQQC~S---------------   87 (502)
T KOG0574|consen   33 EVFDIVGKLGEGSYGSVHKAIHRESGHVLAIKKVPVDT----------DLQEIIKEISIMQQCKS---------------   87 (502)
T ss_pred             HHHHHHHHhcCCcchHHHHHHHhccCcEEEEEecCccc----------hHHHHHHHHHHHHHcCC---------------
Confidence            45778899999999999999      899999999753          45789999999999998               


Q ss_pred             ccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc----cCCHHHHHHHHHHHHHHHH
Q psy9184         335 LKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK----YRSPNQTYAMILQVVFSLA  410 (562)
Q Consensus       335 ~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~----~l~e~~i~~I~~QIl~aL~  410 (562)
                                 |++|++|+.|..             ...+|||||||..|+..+-+.    .++++++..+++..+.||.
T Consensus        88 -----------~yVVKYYGSYFK-------------~sDLWIVMEYCGAGSiSDI~R~R~K~L~E~EIs~iL~~TLKGL~  143 (502)
T KOG0574|consen   88 -----------KYVVKYYGSYFK-------------HSDLWIVMEYCGAGSISDIMRARRKPLSEQEISAVLRDTLKGLQ  143 (502)
T ss_pred             -----------chhhhhhhhhcc-------------CCceEeehhhcCCCcHHHHHHHhcCCccHHHHHHHHHHHHhHHH
Confidence                       999999987754             668999999999997766543    4999999999999999999


Q ss_pred             HHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecC-----CcEEEeecCCCccccC
Q psy9184         411 VAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVG-----EKICYYDLSQDEELFE  485 (562)
Q Consensus       411 yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~-----~g~v~~~l~~~pelF~  485 (562)
                      |||. +.-||||||..|||++.+|                    ..||+|||.|..+.+     ..+++++.|++||+.+
T Consensus       144 YLH~-~~KIHRDIKAGNILLNT~G--------------------~AKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVI~  202 (502)
T KOG0574|consen  144 YLHD-LKKIHRDIKAGNILLNTDG--------------------IAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIE  202 (502)
T ss_pred             HHHH-HHHHHhhcccccEEEcccc--------------------hhhhhhccccchhhhhHHhhCccccCcccccHHHHH
Confidence            9999 8999999999999999998                    799999999998876     6789999999999988


Q ss_pred             C-CCCcHHHHHHHhhccc
Q psy9184         486 G-EGDYQFDMYRMMRKQC  502 (562)
Q Consensus       486 g-~~~~q~dIy~lm~~~~  502 (562)
                      . .++...|||++.-+..
T Consensus       203 EIGY~~~ADIWSLGITaI  220 (502)
T KOG0574|consen  203 EIGYDTKADIWSLGITAI  220 (502)
T ss_pred             HhccchhhhHhhhcchhh
Confidence            7 5677799999765554

>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta

Probab=99.93  E-value=7.8e-26  Score=235.73  Aligned_cols=187  Identities=17%  Similarity=0.179  Sum_probs=149.1

Q ss_pred             CCCceeeeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCccccc
Q psy9184         261 SALKNCKKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTEL  334 (562)
Q Consensus       261 ~~y~~~~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~l  334 (562)
                      ++|++.+.||+|+||.||++      +.||+|++....     .........+..|+.++..++|               
T Consensus         1 d~y~i~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~-----~~~~~~~~~~~~e~~~l~~~~~---------------   60 (331)
T cd05624           1 DDFEIIKVIGRGAFGEVAVVKMKHTERIYAMKILNKWE-----MLKRAETACFREERNVLVNGDC---------------   60 (331)
T ss_pred             CCceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHH-----HHhhHHHHHHHHHHHHHHhCCC---------------
Confidence            36899999999999999999      789999997532     1123334557789999999988               


Q ss_pred             ccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc----cCCHHHHHHHHHHHHHHHH
Q psy9184         335 LKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK----YRSPNQTYAMILQVVFSLA  410 (562)
Q Consensus       335 ~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~----~l~e~~i~~I~~QIl~aL~  410 (562)
                                 ++|+.+++.|.+             ++..|+||||+.||++...+.    .+++..+..++.||+.||+
T Consensus        61 -----------~~i~~l~~~~~~-------------~~~~~lv~Ey~~gg~L~~~l~~~~~~l~~~~~~~~~~qi~~~L~  116 (331)
T cd05624          61 -----------QWITTLHYAFQD-------------ENYLYLVMDYYVGGDLLTLLSKFEDRLPEDMARFYIAEMVLAIH  116 (331)
T ss_pred             -----------CCEeeEEEEEEc-------------CCEEEEEEeCCCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHH
Confidence                       999999998875             568999999999998877663    3789999999999999999


Q ss_pred             HHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecCCc------EEEeecCCCcccc
Q psy9184         411 VAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVGEK------ICYYDLSQDEELF  484 (562)
Q Consensus       411 yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~~g------~v~~~l~~~pelF  484 (562)
                      |||+ .+|+||||||+|||++.++                    .+||+|||+|+.....+      ..++..|++||++
T Consensus       117 ~lH~-~~iiHrDlkp~Nill~~~~--------------------~~kl~DfG~a~~~~~~~~~~~~~~~gt~~y~aPE~~  175 (331)
T cd05624         117 SIHQ-LHYVHRDIKPDNVLLDMNG--------------------HIRLADFGSCLKMNQDGTVQSSVAVGTPDYISPEIL  175 (331)
T ss_pred             HHHH-CCeeeccCchHHEEEcCCC--------------------CEEEEeccceeeccCCCceeeccccCCcccCCHHHH
Confidence            9999 7999999999999998876                    79999999998765421      2356778999988


Q ss_pred             CC------CCCcHHHHHHHhhcccCCCCCCCCCCC
Q psy9184         485 EG------EGDYQFDMYRMMRKQCQNNWQNFTPKN  513 (562)
Q Consensus       485 ~g------~~~~q~dIy~lm~~~~~~~W~~~~P~t  513 (562)
                      .+      ......|+|++ |..+...+.+..|+.
T Consensus       176 ~~~~~~~~~~~~~~DiwSl-Gvil~ell~g~~Pf~  209 (331)
T cd05624         176 QAMEDGMGKYGPECDWWSL-GVCMYEMLYGETPFY  209 (331)
T ss_pred             hccccCCCCCCCcccEEee-ehhhhhhhhCCCCcc
Confidence            75      23455788764 444445556666664

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.

>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase

Probab=99.93  E-value=8.4e-26  Score=233.61  Aligned_cols=221  Identities=16%  Similarity=0.182  Sum_probs=162.6

Q ss_pred             eeeeccCceEEEEE---------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCcccccccc
Q psy9184         267 KKIGEGVYGEVFKL---------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTELLKC  337 (562)
Q Consensus       267 ~~LG~GsfG~Vyka---------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~l~~~  337 (562)
                      +.||+|+||.||++         +.||+|++....      ........+.+|+.+++.++|                  
T Consensus         2 ~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~------~~~~~~~~~~~E~~~l~~l~h------------------   57 (318)
T cd05582           2 KVLGQGSFGKVFLVRKITGPDAGQLYAMKVLKKAT------LKVRDRVRTKMERDILAEVNH------------------   57 (318)
T ss_pred             ceeeeCCCEEEEEEEEeccCCCCCEEEEEEEEHHH------hhhhhHHHHHHHHHHHHhCCC------------------
Confidence            67999999999987         679999998642      112233466789999999998                  


Q ss_pred             cccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc---cCCHHHHHHHHHHHHHHHHHHHh
Q psy9184         338 SCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK---YRSPNQTYAMILQVVFSLAVAEV  414 (562)
Q Consensus       338 ~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~---~l~e~~i~~I~~QIl~aL~yLH~  414 (562)
                              |||+++++.|..             ++.+|+||||+.+|++.+.+.   .+++.+++.++.||+.||.|||+
T Consensus        58 --------~niv~~~~~~~~-------------~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~  116 (318)
T cd05582          58 --------PFIVKLHYAFQT-------------EGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLHS  116 (318)
T ss_pred             --------CCcccEEEEEEc-------------CCEEEEEEcCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHH
Confidence                    999999998875             568999999999998876654   38999999999999999999999


Q ss_pred             hCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecCC-----cEEEeecCCCccccCCC-C
Q psy9184         415 ELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVGE-----KICYYDLSQDEELFEGE-G  488 (562)
Q Consensus       415 ~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~~-----g~v~~~l~~~pelF~g~-~  488 (562)
                       ++|+||||||+|||++.++                    .++|+|||+++.....     ...++..|++||.+.+. .
T Consensus       117 -~~i~H~dlkp~Nil~~~~~--------------------~~kL~Dfg~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~  175 (318)
T cd05582         117 -LGIIYRDLKPENILLDEEG--------------------HIKLTDFGLSKESIDHEKKAYSFCGTVEYMAPEVVNRRGH  175 (318)
T ss_pred             -CCEecCCCCHHHeEECCCC--------------------cEEEeeccCCcccCCCCCceecccCChhhcCHHHHcCCCC
Confidence             7999999999999999886                    7999999999865432     23346678999988764 4


Q ss_pred             CcHHHHHHHhhcccCCCCCCCCCCChhhhHHHHHHHHhhcccCCCCCCCchhHHHHHHHHHHHhcCCCcCcCC
Q psy9184         489 DYQFDMYRMMRKQCQNNWQNFTPKNNVFWIHYLVDKATCLKKGYQYLRAPRHQAFELLEELGQNALHFDSCYE  561 (562)
Q Consensus       489 ~~q~dIy~lm~~~~~~~W~~~~P~tn~~wl~yl~~~Ll~~~~~~~~~~~~~~~~~~~l~~l~~~~l~~~s~~~  561 (562)
                      ....|||++ |......+.+..|+........+ ..+......++..      .-..+..|.+.+|..+...|
T Consensus       176 ~~~~Diwsl-G~il~el~tg~~p~~~~~~~~~~-~~i~~~~~~~p~~------~~~~~~~li~~~l~~~P~~R  240 (318)
T cd05582         176 TQSADWWSF-GVLMFEMLTGSLPFQGKDRKETM-TMILKAKLGMPQF------LSPEAQSLLRALFKRNPANR  240 (318)
T ss_pred             CCccceecc-ceEeeeeccCCCCCCCCCHHHHH-HHHHcCCCCCCCC------CCHHHHHHHHHHhhcCHhHc
Confidence            556899875 55555666677777543322222 2222211122211      12355667777777665544

Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate

>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1

Probab=99.93  E-value=6.4e-26  Score=240.72  Aligned_cols=188  Identities=16%  Similarity=0.193  Sum_probs=149.4

Q ss_pred             CCCCCceeeeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCccc
Q psy9184         259 PSSALKNCKKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFT  332 (562)
Q Consensus       259 ~~~~y~~~~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv  332 (562)
                      ...+|++.+.||+|+||.||+|      +.||+|++....     .........+.+|+.+++.++|             
T Consensus        41 ~~~~y~i~~~lG~G~fg~Vy~~~~~~~~~~~aiK~i~~~~-----~~~~~~~~~~~~e~~i~~~~~h-------------  102 (371)
T cd05622          41 KAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFE-----MIKRSDSAFFWEERDIMAFANS-------------  102 (371)
T ss_pred             chhhcEEEEEEeecCCeEEEEEEECCCCcEEEEEEEEHHH-----hhhhHHHHHHHHHHHHHHhCCC-------------
Confidence            4478999999999999999999      789999997532     1122334567789999999988             


Q ss_pred             ccccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc--cCCHHHHHHHHHHHHHHHH
Q psy9184         333 ELLKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK--YRSPNQTYAMILQVVFSLA  410 (562)
Q Consensus       333 ~l~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~--~l~e~~i~~I~~QIl~aL~  410 (562)
                                   |||+++++.|.+             ++.+|+|||||+||++...+.  .+++..+..++.||+.||.
T Consensus       103 -------------p~iv~~~~~~~~-------------~~~~~lv~Ey~~gg~L~~~~~~~~~~~~~~~~~~~qi~~aL~  156 (371)
T cd05622         103 -------------PWVVQLFYAFQD-------------DRYLYMVMEYMPGGDLVNLMSNYDVPEKWARFYTAEVVLALD  156 (371)
T ss_pred             -------------CCCCeEEEEEEc-------------CCEEEEEEcCCCCCcHHHHHHhcCCCHHHHHHHHHHHHHHHH
Confidence                         999999988875             568999999999998866554  3789999999999999999


Q ss_pred             HHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecCC------cEEEeecCCCcccc
Q psy9184         411 VAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVGE------KICYYDLSQDEELF  484 (562)
Q Consensus       411 yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~~------g~v~~~l~~~pelF  484 (562)
                      |||+ .||+||||||+|||++.++                    .+||+|||+|+.....      ..+++..|++||++
T Consensus       157 ~LH~-~~ivHrDLkp~NIll~~~~--------------------~ikL~DfG~a~~~~~~~~~~~~~~~gt~~y~aPE~l  215 (371)
T cd05622         157 AIHS-MGFIHRDVKPDNMLLDKSG--------------------HLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVL  215 (371)
T ss_pred             HHHH-CCEEeCCCCHHHEEECCCC--------------------CEEEEeCCceeEcCcCCcccccCcccCccccCHHHH
Confidence            9999 7999999999999999876                    7999999999876532      33467889999998


Q ss_pred             CCC-----CCcHHHHHHHhhcccCCCCCCCCCC
Q psy9184         485 EGE-----GDYQFDMYRMMRKQCQNNWQNFTPK  512 (562)
Q Consensus       485 ~g~-----~~~q~dIy~lm~~~~~~~W~~~~P~  512 (562)
                      .+.     ....+|||++. ..+.....+..|+
T Consensus       216 ~~~~~~~~~~~~~DiwSlG-vilyell~G~~Pf  247 (371)
T cd05622         216 KSQGGDGYYGRECDWWSVG-VFLYEMLVGDTPF  247 (371)
T ss_pred             hccCCCccCCCccceeehh-HHHHHHHhCCCCC
Confidence            753     33458887753 3333334445555

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an

>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta

Probab=99.93  E-value=9e-26  Score=233.79  Aligned_cols=169  Identities=19%  Similarity=0.260  Sum_probs=134.9

Q ss_pred             eeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCccccccccccc
Q psy9184         267 KKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTELLKCSCV  340 (562)
Q Consensus       267 ~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~l~~~~iv  340 (562)
                      +.||+|+||.||+|      +.||+|+++...     .......+.+..|..++..+.+                     
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~-----~~~~~~~~~~~~e~~~l~~~~~---------------------   54 (316)
T cd05592           1 KVLGKGSFGKVMLAELKGTNEFFAIKALKKDV-----VLEDDDVECTMVERRVLALAWE---------------------   54 (316)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHH-----hhhhhhHHHHHHHHHHHHhccC---------------------
Confidence            47999999999999      679999998642     1122334456677777776544                     


Q ss_pred             CCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc---cCCHHHHHHHHHHHHHHHHHHHhhCC
Q psy9184         341 RGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK---YRSPNQTYAMILQVVFSLAVAEVELE  417 (562)
Q Consensus       341 ~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~---~l~e~~i~~I~~QIl~aL~yLH~~~~  417 (562)
                          ||||+++++.+..             ++.+|+||||++||++...+.   .+++.++..++.||+.||.|||+ .+
T Consensus        55 ----hp~i~~~~~~~~~-------------~~~~~lv~e~~~gg~L~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~-~~  116 (316)
T cd05592          55 ----HPFLTHLFCTFQT-------------KEHLFFVMEYLNGGDLMFHIQSSGRFDEARARFYAAEIICGLQFLHK-KG  116 (316)
T ss_pred             ----CCCccceeeEEEc-------------CCEEEEEEcCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHH-CC
Confidence                4999999988875             558999999999998876553   48999999999999999999999 79


Q ss_pred             eEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecC-----CcEEEeecCCCccccCCC-CCcH
Q psy9184         418 FEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVG-----EKICYYDLSQDEELFEGE-GDYQ  491 (562)
Q Consensus       418 IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~-----~g~v~~~l~~~pelF~g~-~~~q  491 (562)
                      |+||||||+|||++.++                    .+||+|||+|+....     ...+++..|++||++.+. .+..
T Consensus       117 ivH~dlkp~Nill~~~~--------------------~~kL~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~  176 (316)
T cd05592         117 IIYRDLKLDNVLLDKDG--------------------HIKIADFGMCKENMNGEGKASTFCGTPDYIAPEILKGQKYNES  176 (316)
T ss_pred             EEeCCCCHHHeEECCCC--------------------CEEEccCcCCeECCCCCCccccccCCccccCHHHHcCCCCCCc
Confidence            99999999999999886                    799999999986532     223457789999998774 4556


Q ss_pred             HHHHHHhh
Q psy9184         492 FDMYRMMR  499 (562)
Q Consensus       492 ~dIy~lm~  499 (562)
                      .|||++.-
T Consensus       177 ~DvwslG~  184 (316)
T cd05592         177 VDWWSFGV  184 (316)
T ss_pred             ccchhHHH
Confidence            88887543

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp

>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5

Probab=99.93  E-value=5e-25  Score=223.11  Aligned_cols=184  Identities=17%  Similarity=0.253  Sum_probs=146.2

Q ss_pred             CCceeeeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCcccccc
Q psy9184         262 ALKNCKKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTELL  335 (562)
Q Consensus       262 ~y~~~~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~l~  335 (562)
                      +|++.+.||+|+||.||+|      +.||+|++.....      .....+.+.+|+.+++.++|                
T Consensus         2 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~------~~~~~~~~~~E~~~l~~l~h----------------   59 (287)
T cd07848           2 KFEVLGVVGEGAYGVVLKCRHKETKEIVAIKKFKDSEE------NEEVKETTLRELKMLRTLKQ----------------   59 (287)
T ss_pred             CceEEEEecccCCEEEEEEEECCCCcEEEEEEEecccc------cccchhhHHHHHHHHHhCCC----------------
Confidence            6899999999999999999      6899999986531      12234567889999999998                


Q ss_pred             cccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc----cCCHHHHHHHHHHHHHHHHH
Q psy9184         336 KCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK----YRSPNQTYAMILQVVFSLAV  411 (562)
Q Consensus       336 ~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~----~l~e~~i~~I~~QIl~aL~y  411 (562)
                                |||+++++.|..             ++.+|+||||+.++ ++..+.    .+++..++.++.||+.||.|
T Consensus        60 ----------~~iv~~~~~~~~-------------~~~~~lv~e~~~~~-~l~~~~~~~~~~~~~~~~~~~~qi~~~L~~  115 (287)
T cd07848          60 ----------ENIVELKEAFRR-------------RGKLYLVFEYVEKN-MLELLEEMPNGVPPEKVRSYIYQLIKAIHW  115 (287)
T ss_pred             ----------ccccchhhhEec-------------CCEEEEEEecCCCC-HHHHHHhcCCCCCHHHHHHHHHHHHHHHHH
Confidence                      999999998875             56899999999976 444332    38899999999999999999


Q ss_pred             HHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecCC------cEEEeecCCCccccC
Q psy9184         412 AEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVGE------KICYYDLSQDEELFE  485 (562)
Q Consensus       412 LH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~~------g~v~~~l~~~pelF~  485 (562)
                      ||+ .+|+||||||+|||++.++                    .+||+|||+++.....      ....+..|++||++.
T Consensus       116 lH~-~~i~H~dlkp~Nill~~~~--------------------~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~  174 (287)
T cd07848         116 CHK-NDIVHRDIKPENLLISHND--------------------VLKLCDFGFARNLSEGSNANYTEYVATRWYRSPELLL  174 (287)
T ss_pred             HHH-CCeecCCCCHHHEEEcCCC--------------------cEEEeeccCcccccccccccccccccccccCCcHHHc
Confidence            999 7999999999999998876                    7999999999876431      234566789999886


Q ss_pred             C-CCCcHHHHHHHhhcccCCCCCCCCCCC
Q psy9184         486 G-EGDYQFDMYRMMRKQCQNNWQNFTPKN  513 (562)
Q Consensus       486 g-~~~~q~dIy~lm~~~~~~~W~~~~P~t  513 (562)
                      + ..+...|+|++ |......+.+..|+.
T Consensus       175 ~~~~~~~~Diwsl-Gvil~el~~g~~pf~  202 (287)
T cd07848         175 GAPYGKAVDMWSV-GCILGELSDGQPLFP  202 (287)
T ss_pred             CCCCCCchhHHhH-HHHHHHHHhCCCCCC
Confidence            6 34556899875 333334445555553

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes

>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase

Probab=99.93  E-value=4.3e-26  Score=241.85  Aligned_cols=189  Identities=16%  Similarity=0.199  Sum_probs=149.4

Q ss_pred             CCCCCceeeeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCccc
Q psy9184         259 PSSALKNCKKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFT  332 (562)
Q Consensus       259 ~~~~y~~~~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv  332 (562)
                      ..++|++.+.||+|+||.||+|      ..||+|++....     .........+.+|+.+++.++|             
T Consensus        41 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~-----~~~~~~~~~~~~e~~il~~~~h-------------  102 (370)
T cd05596          41 KAEDFDVIKVIGRGAFGEVQLVRHKSSKQVYAMKLLSKFE-----MIKRSDSAFFWEERDIMAHANS-------------  102 (370)
T ss_pred             CHHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHH-----hhhhhhHHHHHHHHHHHHhCCC-------------
Confidence            3467999999999999999999      689999997532     1112233457789999999998             


Q ss_pred             ccccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc--cCCHHHHHHHHHHHHHHHH
Q psy9184         333 ELLKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK--YRSPNQTYAMILQVVFSLA  410 (562)
Q Consensus       333 ~l~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~--~l~e~~i~~I~~QIl~aL~  410 (562)
                                   |||+++++.|.+             ++.+|+||||+.||++.+.+.  .+++..+..++.||+.||+
T Consensus       103 -------------~~iv~~~~~~~~-------------~~~~~lv~Ey~~gg~L~~~l~~~~l~~~~~~~~~~qi~~aL~  156 (370)
T cd05596         103 -------------EWIVQLHYAFQD-------------DKYLYMVMEYMPGGDLVNLMSNYDIPEKWARFYTAEVVLALD  156 (370)
T ss_pred             -------------CCcceEEEEEec-------------CCEEEEEEcCCCCCcHHHHHHhcCCCHHHHHHHHHHHHHHHH
Confidence                         999999988875             558999999999998876654  3789999999999999999


Q ss_pred             HHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecCC------cEEEeecCCCcccc
Q psy9184         411 VAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVGE------KICYYDLSQDEELF  484 (562)
Q Consensus       411 yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~~------g~v~~~l~~~pelF  484 (562)
                      |||+ .||+||||||+|||++.++                    .+||+|||+++.....      ..+++..|++||++
T Consensus       157 ~LH~-~~ivHrDLkp~NILl~~~~--------------------~~kL~DfG~~~~~~~~~~~~~~~~~gt~~y~aPE~~  215 (370)
T cd05596         157 AIHS-MGFIHRDVKPDNMLLDKSG--------------------HLKLADFGTCMKMDANGMVRCDTAVGTPDYISPEVL  215 (370)
T ss_pred             HHHH-CCeeccCCCHHHEEEcCCC--------------------CEEEEeccceeeccCCCcccCCCCCCCcCeECHHHh
Confidence            9999 7999999999999999886                    7999999999876432      23457788999988


Q ss_pred             CCC-----CCcHHHHHHHhhcccCCCCCCCCCCC
Q psy9184         485 EGE-----GDYQFDMYRMMRKQCQNNWQNFTPKN  513 (562)
Q Consensus       485 ~g~-----~~~q~dIy~lm~~~~~~~W~~~~P~t  513 (562)
                      .+.     ...+.|||++ |..+.....+..|+.
T Consensus       216 ~~~~~~~~~~~~~DiwSl-GvilyelltG~~Pf~  248 (370)
T cd05596         216 KSQGGDGYYGRECDWWSV-GVFLYEMLVGDTPFY  248 (370)
T ss_pred             ccCCCCCCCCCceeeeeh-hHHHHHHHhCCCCcC
Confidence            653     3445788775 333334445555554

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in

>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1

Probab=99.93  E-value=5.4e-25  Score=225.48  Aligned_cols=174  Identities=22%  Similarity=0.247  Sum_probs=140.2

Q ss_pred             CCCCCceeeeeeccCceEEEEEe----------------------eEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHh
Q psy9184         259 PSSALKNCKKIGEGVYGEVFKLN----------------------NSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKE  316 (562)
Q Consensus       259 ~~~~y~~~~~LG~GsfG~Vyka~----------------------~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~  316 (562)
                      +.++|.+.++||+|+||.||+|.                      .||+|++....       .......+.+|+.+++.
T Consensus         3 ~~~~~~~~~~lg~G~fg~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~~-------~~~~~~~~~~E~~~l~~   75 (304)
T cd05096           3 PRGHLLFKEKLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDA-------NKNARNDFLKEVKILSR   75 (304)
T ss_pred             chhhCeeeeEecccCCeEEEEEEeccCcccccccccccccCCcceEEEEEEecCCC-------CHHHHHHHHHHHHHHhh
Confidence            55789999999999999999981                      59999987542       23345678899999999


Q ss_pred             cCCccccCCCCCCcccccccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc-----
Q psy9184         317 TSDLQYRTENSTPCFTELLKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK-----  391 (562)
Q Consensus       317 L~h~~~~~~n~~p~fv~l~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~-----  391 (562)
                      ++|                          |||+++++++.+             .+..|+||||+.+|++.+.+.     
T Consensus        76 l~h--------------------------~niv~~~~~~~~-------------~~~~~lv~e~~~~~~L~~~l~~~~~~  116 (304)
T cd05096          76 LKD--------------------------PNIIRLLGVCVD-------------EDPLCMITEYMENGDLNQFLSSHHLD  116 (304)
T ss_pred             cCC--------------------------CCeeEEEEEEec-------------CCceEEEEecCCCCcHHHHHHhcccc
Confidence            998                          999999998875             457899999999998765442     


Q ss_pred             -----------------cCCHHHHHHHHHHHHHHHHHHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCc
Q psy9184         392 -----------------YRSPNQTYAMILQVVFSLAVAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGV  454 (562)
Q Consensus       392 -----------------~l~e~~i~~I~~QIl~aL~yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~  454 (562)
                                       .+++..+..++.||+.||.|||+ +||+||||||+|||++.++                    
T Consensus       117 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~-~~ivH~dlkp~Nill~~~~--------------------  175 (304)
T cd05096         117 DKEENGNDAVPPAHCLPAISYSSLLHVALQIASGMKYLSS-LNFVHRDLATRNCLVGENL--------------------  175 (304)
T ss_pred             ccccccccccccccccccccHHHHHHHHHHHHHHHHHHHH-CCccccCcchhheEEcCCc--------------------
Confidence                             25677889999999999999999 7999999999999999876                    


Q ss_pred             eEEEEeccceeeecCCc-------EEEeecCCCccccCC-CCCcHHHHHHHhh
Q psy9184         455 QVTIIDFTISRCFVGEK-------ICYYDLSQDEELFEG-EGDYQFDMYRMMR  499 (562)
Q Consensus       455 ~vKL~DFGLSr~~~~~g-------~v~~~l~~~pelF~g-~~~~q~dIy~lm~  499 (562)
                      .+||+|||+++......       ...+..|++||.+.+ ..+...|||++.-
T Consensus       176 ~~kl~DfG~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~  228 (304)
T cd05096         176 TIKIADFGMSRNLYAGDYYRIQGRAVLPIRWMAWECILMGKFTTASDVWAFGV  228 (304)
T ss_pred             cEEECCCccceecccCceeEecCcCCCCccccCHHHHhcCCCCchhhhHHHHH
Confidence            79999999998754321       122446889997654 5566789988643

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k

>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2

Probab=99.93  E-value=3.2e-25  Score=230.91  Aligned_cols=175  Identities=22%  Similarity=0.261  Sum_probs=145.9

Q ss_pred             CCCCCceeeeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCccc
Q psy9184         259 PSSALKNCKKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFT  332 (562)
Q Consensus       259 ~~~~y~~~~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv  332 (562)
                      ..++|++.+.||+|+||.||+|      ..+|+|++....       .......+.+|+.+++.++|             
T Consensus         3 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~-------~~~~~~~~~~E~~~l~~l~h-------------   62 (331)
T cd06649           3 KDDDFERISELGAGNGGVVTKVQHKPSGLIMARKLIHLEI-------KPAIRNQIIRELQVLHECNS-------------   62 (331)
T ss_pred             CcccceEEEeecCCCCEEEEEEEECCCCcEEEEEEeeccc-------CHHHHHHHHHHHHHHHHCCC-------------
Confidence            3478999999999999999999      679999998642       23345678999999999998             


Q ss_pred             ccccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc---cCCHHHHHHHHHHHHHHH
Q psy9184         333 ELLKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK---YRSPNQTYAMILQVVFSL  409 (562)
Q Consensus       333 ~l~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~---~l~e~~i~~I~~QIl~aL  409 (562)
                                   |||+++++++..             ++.+|+||||++||++.+.+.   .+++..+..++.|++.||
T Consensus        63 -------------~~iv~~~~~~~~-------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~l  116 (331)
T cd06649          63 -------------PYIVGFYGAFYS-------------DGEISICMEHMDGGSLDQVLKEAKRIPEEILGKVSIAVLRGL  116 (331)
T ss_pred             -------------CCCCeEEEEEEE-------------CCEEEEEeecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHH
Confidence                         999999998875             558999999999998766553   388999999999999999


Q ss_pred             HHHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecC---CcEEEeecCCCccccCC
Q psy9184         410 AVAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVG---EKICYYDLSQDEELFEG  486 (562)
Q Consensus       410 ~yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~---~g~v~~~l~~~pelF~g  486 (562)
                      .|||+..+|+||||||+|||++.++                    .++|+|||+++....   ....++..|++||.+.+
T Consensus       117 ~~lH~~~~ivH~dlkp~Nil~~~~~--------------------~~kl~Dfg~~~~~~~~~~~~~~g~~~y~aPE~~~~  176 (331)
T cd06649         117 AYLREKHQIMHRDVKPSNILVNSRG--------------------EIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQG  176 (331)
T ss_pred             HHHhhcCCEEcCCCChhhEEEcCCC--------------------cEEEccCcccccccccccccCCCCcCcCCHhHhcC
Confidence            9999854699999999999999886                    799999999986643   22345678899999887


Q ss_pred             C-CCcHHHHHHHhh
Q psy9184         487 E-GDYQFDMYRMMR  499 (562)
Q Consensus       487 ~-~~~q~dIy~lm~  499 (562)
                      . .+.+.|||++.-
T Consensus       177 ~~~~~~~DiwslG~  190 (331)
T cd06649         177 THYSVQSDIWSMGL  190 (331)
T ss_pred             CCCCchHhHHHHHH
Confidence            4 566799998643

Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst

>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2

Probab=99.93  E-value=1.4e-25  Score=232.27  Aligned_cols=222  Identities=19%  Similarity=0.174  Sum_probs=156.7

Q ss_pred             eeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHH-HHHhcCCccccCCCCCCcccccccccc
Q psy9184         267 KKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIM-VTKETSDLQYRTENSTPCFTELLKCSC  339 (562)
Q Consensus       267 ~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~-ilk~L~h~~~~~~n~~p~fv~l~~~~i  339 (562)
                      +.||+|+||.||+|      +.||+|++....     .........+..|.. +++.++|                    
T Consensus         1 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~-----~~~~~~~~~~~~e~~~~l~~~~h--------------------   55 (321)
T cd05603           1 KVIGKGSFGKVLLAKRKSDGSFYAVKVLQKKT-----ILKKKEQNHIMAERNVLLKNLKH--------------------   55 (321)
T ss_pred             CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHH-----HHHhhHHHHHHHHHHHHHHhCCC--------------------
Confidence            47999999999999      689999998542     112233345566655 5777887                    


Q ss_pred             cCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc---cCCHHHHHHHHHHHHHHHHHHHhhC
Q psy9184         340 VRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK---YRSPNQTYAMILQVVFSLAVAEVEL  416 (562)
Q Consensus       340 v~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~---~l~e~~i~~I~~QIl~aL~yLH~~~  416 (562)
                            |||+++++.|.+             .+.+|+||||++||++...+.   .+++.++..++.||+.||.|||+ .
T Consensus        56 ------~~iv~~~~~~~~-------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~L~~lH~-~  115 (321)
T cd05603          56 ------PFLVGLHYSFQT-------------AEKLYFVLDYVNGGELFFHLQRERCFLEPRARFYAAEVASAIGYLHS-L  115 (321)
T ss_pred             ------CCccceeeEEEc-------------CCEEEEEEcCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHH-C
Confidence                  999999988875             558999999999998866553   38899999999999999999999 7


Q ss_pred             CeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecC-----CcEEEeecCCCccccCCC-CCc
Q psy9184         417 EFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVG-----EKICYYDLSQDEELFEGE-GDY  490 (562)
Q Consensus       417 ~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~-----~g~v~~~l~~~pelF~g~-~~~  490 (562)
                      ||+||||||+|||++.++                    .+||+|||+++....     ...+++..|++||.+.+. .+.
T Consensus       116 ~ivH~Dlkp~NIll~~~~--------------------~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~  175 (321)
T cd05603         116 NIIYRDLKPENILLDSQG--------------------HVVLTDFGLCKEGVEPEETTSTFCGTPEYLAPEVLRKEPYDR  175 (321)
T ss_pred             CeEeccCCHHHeEECCCC--------------------CEEEccCCCCccCCCCCCccccccCCcccCCHHHhcCCCCCC
Confidence            999999999999999886                    799999999886322     123456778999988763 455


Q ss_pred             HHHHHHHhhcccCCCCCCCCCCChhhhHHHHHHHHhhcccCCCCCCCchhHHHHHHHHHHHhcCCCcCcCC
Q psy9184         491 QFDMYRMMRKQCQNNWQNFTPKNNVFWIHYLVDKATCLKKGYQYLRAPRHQAFELLEELGQNALHFDSCYE  561 (562)
Q Consensus       491 q~dIy~lm~~~~~~~W~~~~P~tn~~wl~yl~~~Ll~~~~~~~~~~~~~~~~~~~l~~l~~~~l~~~s~~~  561 (562)
                      ..|||++ |........+..|+...-. .-+...++.....++...      ...+.++...+|+.+...|
T Consensus       176 ~~Diwsl-G~il~el~~g~~pf~~~~~-~~~~~~i~~~~~~~~~~~------~~~~~~li~~~l~~~p~~R  238 (321)
T cd05603         176 TVDWWCL-GAVLYEMLYGLPPFYSRDV-SQMYDNILHKPLQLPGGK------TVAACDLLVGLLHKDQRRR  238 (321)
T ss_pred             cCccccc-chhhhhhhcCCCCCCCCCH-HHHHHHHhcCCCCCCCCC------CHHHHHHHHHHccCCHhhc
Confidence            6899875 4444455666667643321 112223333111222111      2345566677776655444

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.

>PLN00034 mitogen-activated protein kinase kinase; Provisional

Probab=99.93  E-value=3.1e-25  Score=233.02  Aligned_cols=226  Identities=19%  Similarity=0.238  Sum_probs=163.0

Q ss_pred             CCCceeeeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCccccc
Q psy9184         261 SALKNCKKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTEL  334 (562)
Q Consensus       261 ~~y~~~~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~l  334 (562)
                      ++|+.+++||+|+||.||+|      +.||||++....       .......+.+|+.+++.++|               
T Consensus        74 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-------~~~~~~~~~~E~~~l~~l~h---------------  131 (353)
T PLN00034         74 SELERVNRIGSGAGGTVYKVIHRPTGRLYALKVIYGNH-------EDTVRRQICREIEILRDVNH---------------  131 (353)
T ss_pred             HHHhhhhhccCCCCeEEEEEEECCCCCEEEEEEEecCC-------cHHHHHHHHHHHHHHHhCCC---------------
Confidence            45778899999999999999      789999997542       23344678899999999998               


Q ss_pred             ccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccccCCHHHHHHHHHHHHHHHHHHHh
Q psy9184         335 LKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIKYRSPNQTYAMILQVVFSLAVAEV  414 (562)
Q Consensus       335 ~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~~l~e~~i~~I~~QIl~aL~yLH~  414 (562)
                                 +||++++++|..             ++.+|+||||+.+|++. .....++..+..++.||+.||.|||+
T Consensus       132 -----------~~iv~~~~~~~~-------------~~~~~lv~e~~~~~~L~-~~~~~~~~~~~~i~~qi~~aL~~LH~  186 (353)
T PLN00034        132 -----------PNVVKCHDMFDH-------------NGEIQVLLEFMDGGSLE-GTHIADEQFLADVARQILSGIAYLHR  186 (353)
T ss_pred             -----------CCcceeeeEecc-------------CCeEEEEEecCCCCccc-ccccCCHHHHHHHHHHHHHHHHHHHH
Confidence                       999999998875             55899999999988654 33456788899999999999999999


Q ss_pred             hCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecC-----CcEEEeecCCCccccCCC--
Q psy9184         415 ELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVG-----EKICYYDLSQDEELFEGE--  487 (562)
Q Consensus       415 ~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~-----~g~v~~~l~~~pelF~g~--  487 (562)
                       +||+||||||+|||++.++                    .+||+|||+++....     ...+++..|++||.+...  
T Consensus       187 -~~ivHrDlkp~NIll~~~~--------------------~~kL~DfG~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~  245 (353)
T PLN00034        187 -RHIVHRDIKPSNLLINSAK--------------------NVKIADFGVSRILAQTMDPCNSSVGTIAYMSPERINTDLN  245 (353)
T ss_pred             -CCEeecCCCHHHEEEcCCC--------------------CEEEcccccceecccccccccccccCccccCccccccccc
Confidence             7999999999999999876                    799999999987653     233557789999987532  


Q ss_pred             ----CCcHHHHHHHhhcccCCCCCCCCCCC---hhhhHHHHHHHHhhcccCCCCCCCchhHHHHHHHHHHHhcCCCcCcC
Q psy9184         488 ----GDYQFDMYRMMRKQCQNNWQNFTPKN---NVFWIHYLVDKATCLKKGYQYLRAPRHQAFELLEELGQNALHFDSCY  560 (562)
Q Consensus       488 ----~~~q~dIy~lm~~~~~~~W~~~~P~t---n~~wl~yl~~~Ll~~~~~~~~~~~~~~~~~~~l~~l~~~~l~~~s~~  560 (562)
                          .....|||++.-... ..+.+..|+.   ...|...+......  ......    ...-..+.+|.+.+|..+...
T Consensus       246 ~~~~~~~~~DvwslGvil~-el~~g~~pf~~~~~~~~~~~~~~~~~~--~~~~~~----~~~~~~l~~li~~~l~~~P~~  318 (353)
T PLN00034        246 HGAYDGYAGDIWSLGVSIL-EFYLGRFPFGVGRQGDWASLMCAICMS--QPPEAP----ATASREFRHFISCCLQREPAK  318 (353)
T ss_pred             cCcCCCcchhHHHHHHHHH-HHHhCCCCCCCCCCccHHHHHHHHhcc--CCCCCC----CccCHHHHHHHHHHccCChhh
Confidence                124589988543332 3334444442   12233333222222  111100    112346777888888877665


Q ss_pred             C
Q psy9184         561 E  561 (562)
Q Consensus       561 ~  561 (562)
                      |
T Consensus       319 R  319 (353)
T PLN00034        319 R  319 (353)
T ss_pred             C
Confidence            4

>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C

Probab=99.93  E-value=1.7e-25  Score=231.77  Aligned_cols=223  Identities=15%  Similarity=0.129  Sum_probs=162.2

Q ss_pred             eeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCccccccccccc
Q psy9184         267 KKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTELLKCSCV  340 (562)
Q Consensus       267 ~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~l~~~~iv  340 (562)
                      +.||+|+||.||+|      +.||+|+++...     .........+.+|+.+++.+.+                     
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~-----~~~~~~~~~~~~e~~il~~~~~---------------------   54 (318)
T cd05570           1 KVLGKGSFGKVLLAELKGTDELYAVKVLKKDV-----ILQDDDVECTMTEKRVLALAGK---------------------   54 (318)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHH-----HhhhhHHHHHHHHHHHHHhccC---------------------
Confidence            46999999999999      689999998642     1123344567789999988854                     


Q ss_pred             CCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc---cCCHHHHHHHHHHHHHHHHHHHhhCC
Q psy9184         341 RGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK---YRSPNQTYAMILQVVFSLAVAEVELE  417 (562)
Q Consensus       341 ~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~---~l~e~~i~~I~~QIl~aL~yLH~~~~  417 (562)
                          ||||+++++.|..             .+.+|+||||+.||++...+.   .+++.++..++.||+.||.|||+ .+
T Consensus        55 ----h~~i~~~~~~~~~-------------~~~~~lv~e~~~~~~L~~~~~~~~~l~~~~~~~~~~qi~~~l~~LH~-~~  116 (318)
T cd05570          55 ----HPFLTQLHSCFQT-------------KDRLFFVMEYVNGGDLMFHIQRSGRFDEPRARFYAAEIVLGLQFLHE-RG  116 (318)
T ss_pred             ----CCCccceeeEEEc-------------CCEEEEEEcCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHh-CC
Confidence                5999999998875             558999999999998766553   48999999999999999999999 79


Q ss_pred             eEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecC-----CcEEEeecCCCccccCC-CCCcH
Q psy9184         418 FEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVG-----EKICYYDLSQDEELFEG-EGDYQ  491 (562)
Q Consensus       418 IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~-----~g~v~~~l~~~pelF~g-~~~~q  491 (562)
                      |+||||||+|||++.++                    .++|+|||+++....     ...+++..|++||++.+ ..+..
T Consensus       117 ivH~dlkp~Nill~~~~--------------------~~kl~Dfg~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~  176 (318)
T cd05570         117 IIYRDLKLDNVLLDSEG--------------------HIKIADFGMCKEGILGGVTTSTFCGTPDYIAPEILSYQPYGPA  176 (318)
T ss_pred             eEccCCCHHHeEECCCC--------------------cEEecccCCCeecCcCCCcccceecCccccCHHHhcCCCCCcc
Confidence            99999999999999886                    799999999976322     22345678999999877 45566


Q ss_pred             HHHHHHhhcccCCCCCCCCCCChhhhHHHHHHHHhhcccCCCCCCCchhHHHHHHHHHHHhcCCCcCcCC
Q psy9184         492 FDMYRMMRKQCQNNWQNFTPKNNVFWIHYLVDKATCLKKGYQYLRAPRHQAFELLEELGQNALHFDSCYE  561 (562)
Q Consensus       492 ~dIy~lm~~~~~~~W~~~~P~tn~~wl~yl~~~Ll~~~~~~~~~~~~~~~~~~~l~~l~~~~l~~~s~~~  561 (562)
                      .|||++. ......+.+..|+........ ...+......++..      .-..+.+|.+++|..+...|
T Consensus       177 ~DiwslG-vil~~l~~G~~pf~~~~~~~~-~~~i~~~~~~~~~~------~~~~~~~li~~~l~~dP~~R  238 (318)
T cd05570         177 VDWWALG-VLLYEMLAGQSPFEGDDEDEL-FQSILEDEVRYPRW------LSKEAKSILKSFLTKNPEKR  238 (318)
T ss_pred             hhhhhHH-HHHHHHhhCCCCCCCCCHHHH-HHHHHcCCCCCCCc------CCHHHHHHHHHHccCCHHHc
Confidence            8998863 333344455566643332222 22233212222211      12456777888888776554

Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re

>PTZ00267 NIMA-related protein kinase; Provisional

Probab=99.93  E-value=3.8e-25  Score=242.64  Aligned_cols=170  Identities=20%  Similarity=0.309  Sum_probs=141.5

Q ss_pred             CCCceeeeeeccCceEEEEE-------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCcccc
Q psy9184         261 SALKNCKKIGEGVYGEVFKL-------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTE  333 (562)
Q Consensus       261 ~~y~~~~~LG~GsfG~Vyka-------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~  333 (562)
                      ..|.+.+.||+|+||.||+|       ..||+|.+....        ......+.+|+.+++.++|              
T Consensus        67 ~~y~~~~~lg~G~~g~vy~a~~~~~~~~~vv~K~~~~~~--------~~~~~~~~~E~~~l~~l~H--------------  124 (478)
T PTZ00267         67 HMYVLTTLVGRNPTTAAFVATRGSDPKEKVVAKFVMLND--------ERQAAYARSELHCLAACDH--------------  124 (478)
T ss_pred             eeEEEEEEEEeCCCcEEEEEEEcCCCCeEEEEEEcccCC--------HHHHHHHHHHHHHHHhCCC--------------
Confidence            34899999999999999999       568888776432        2334567789999999998              


Q ss_pred             cccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc-------cCCHHHHHHHHHHHH
Q psy9184         334 LLKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK-------YRSPNQTYAMILQVV  406 (562)
Q Consensus       334 l~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~-------~l~e~~i~~I~~QIl  406 (562)
                                  |||+++++.|..             ++.+||||||++||++.+.+.       .+++.++..++.||+
T Consensus       125 ------------pniv~~~~~~~~-------------~~~~~lv~E~~~gg~L~~~l~~~~~~~~~l~~~~~~~i~~qi~  179 (478)
T PTZ00267        125 ------------FGIVKHFDDFKS-------------DDKLLLIMEYGSGGDLNKQIKQRLKEHLPFQEYEVGLLFYQIV  179 (478)
T ss_pred             ------------CCEeEEEEEEEE-------------CCEEEEEEECCCCCCHHHHHHHHHhccCCCCHHHHHHHHHHHH
Confidence                        999999999875             568999999999998865442       378999999999999


Q ss_pred             HHHHHHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecCC-------cEEEeecCC
Q psy9184         407 FSLAVAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVGE-------KICYYDLSQ  479 (562)
Q Consensus       407 ~aL~yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~~-------g~v~~~l~~  479 (562)
                      .||.|||+ .+|+||||||+|||++.++                    .+||+|||+|+.....       ..+++..|+
T Consensus       180 ~aL~~lH~-~~ivHrDlkp~NIll~~~~--------------------~~kL~DFgla~~~~~~~~~~~~~~~~gt~~y~  238 (478)
T PTZ00267        180 LALDEVHS-RKMMHRDLKSANIFLMPTG--------------------IIKLGDFGFSKQYSDSVSLDVASSFCGTPYYL  238 (478)
T ss_pred             HHHHHHHh-CCEEECCcCHHhEEECCCC--------------------cEEEEeCcCceecCCccccccccccCCCcccc
Confidence            99999999 7999999999999999876                    7999999999876431       223577899


Q ss_pred             CccccCCC-CCcHHHHHHHh
Q psy9184         480 DEELFEGE-GDYQFDMYRMM  498 (562)
Q Consensus       480 ~pelF~g~-~~~q~dIy~lm  498 (562)
                      +||++.+. .....|||++.
T Consensus       239 aPE~~~~~~~~~~~Dv~slG  258 (478)
T PTZ00267        239 APELWERKRYSKKADMWSLG  258 (478)
T ss_pred             CHhHhCCCCCCcHHhHHHHH
Confidence            99998774 55668998863

>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants

Probab=99.93  E-value=3e-25  Score=229.99  Aligned_cols=188  Identities=20%  Similarity=0.189  Sum_probs=143.8

Q ss_pred             CCceeeeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCcccccc
Q psy9184         262 ALKNCKKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTELL  335 (562)
Q Consensus       262 ~y~~~~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~l~  335 (562)
                      +|++.++||+|+||.||+|      ..||||++....      ........+.+|+.+++.++|                
T Consensus         1 ry~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~------~~~~~~~~~~~E~~~l~~l~h----------------   58 (338)
T cd07859           1 RYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKINDVF------EHVSDATRILREIKLLRLLRH----------------   58 (338)
T ss_pred             CeEEEEEEeecCCeEEEEEEECCCCCEEEEEEechhh------ccchhHHHHHHHHHHHHhCCC----------------
Confidence            4889999999999999999      789999987532      112233567899999999998                


Q ss_pred             cccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc---cCCHHHHHHHHHHHHHHHHHH
Q psy9184         336 KCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK---YRSPNQTYAMILQVVFSLAVA  412 (562)
Q Consensus       336 ~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~---~l~e~~i~~I~~QIl~aL~yL  412 (562)
                                |||+++++++....        ......+|+|||||. +++.+.+.   .+++..+..++.||+.||.||
T Consensus        59 ----------pniv~~~~~~~~~~--------~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~L  119 (338)
T cd07859          59 ----------PDIVEIKHIMLPPS--------RREFKDIYVVFELME-SDLHQVIKANDDLTPEHHQFFLYQLLRALKYI  119 (338)
T ss_pred             ----------CCEeeecceEeccC--------CCCCceEEEEEecCC-CCHHHHHHhcccCCHHHHHHHHHHHHHHHHHH
Confidence                      99999988875421        111246899999995 55555443   489999999999999999999


Q ss_pred             HhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecC--------CcEEEeecCCCcccc
Q psy9184         413 EVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVG--------EKICYYDLSQDEELF  484 (562)
Q Consensus       413 H~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~--------~g~v~~~l~~~pelF  484 (562)
                      |+ .||+||||||+|||++.++                    .+||+|||+++....        ...+++..|++||++
T Consensus       120 H~-~~ivH~dlkp~NIll~~~~--------------------~~kL~Dfg~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~  178 (338)
T cd07859         120 HT-ANVFHRDLKPKNILANADC--------------------KLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELC  178 (338)
T ss_pred             HH-CCeecCCCCHHHeEECCCC--------------------cEEEccCccccccccccCccccccCCCCCCCcCCHHHH
Confidence            99 7999999999999999886                    799999999986532        123456778999987


Q ss_pred             CC---CCCcHHHHHHHhhcccCCCCCCCCCC
Q psy9184         485 EG---EGDYQFDMYRMMRKQCQNNWQNFTPK  512 (562)
Q Consensus       485 ~g---~~~~q~dIy~lm~~~~~~~W~~~~P~  512 (562)
                      .+   ..+...|||++. ......+.+..|+
T Consensus       179 ~~~~~~~~~~~DvwSlG-vvl~el~tg~~pf  208 (338)
T cd07859         179 GSFFSKYTPAIDIWSIG-CIFAEVLTGKPLF  208 (338)
T ss_pred             hccccccCchhHHHHHH-HHHHHHHcCCCCC
Confidence            65   345569998863 3333344444444

Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos

>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase

Probab=99.93  E-value=1.7e-25  Score=231.97  Aligned_cols=182  Identities=20%  Similarity=0.262  Sum_probs=141.3

Q ss_pred             eeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHH-HHHhcCCccccCCCCCCcccccccccc
Q psy9184         267 KKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIM-VTKETSDLQYRTENSTPCFTELLKCSC  339 (562)
Q Consensus       267 ~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~-ilk~L~h~~~~~~n~~p~fv~l~~~~i  339 (562)
                      +.||+|+||+||+|      +.||+|++....     .........+..|.. +++.++|                    
T Consensus         1 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-----~~~~~~~~~~~~e~~~~~~~l~h--------------------   55 (323)
T cd05575           1 KVIGKGSFGKVLLAKHKADGKFYAVKVLQKKA-----ILKKKEQKHIMAERNVLLKNVKH--------------------   55 (323)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHH-----HhhhhHHHHHHHHHHHHHhhCCC--------------------
Confidence            46999999999999      789999998642     111222345556655 4577887                    


Q ss_pred             cCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc---cCCHHHHHHHHHHHHHHHHHHHhhC
Q psy9184         340 VRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK---YRSPNQTYAMILQVVFSLAVAEVEL  416 (562)
Q Consensus       340 v~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~---~l~e~~i~~I~~QIl~aL~yLH~~~  416 (562)
                            |||+++++.|..             .+..|+||||+.||++...+.   .+++..+..++.||+.||.|||+ .
T Consensus        56 ------p~iv~~~~~~~~-------------~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~-~  115 (323)
T cd05575          56 ------PFLVGLHYSFQT-------------ADKLYFVLDYVNGGELFFHLQRERSFPEPRARFYAAEIASALGYLHS-L  115 (323)
T ss_pred             ------CCCCCeeEEEEe-------------CCEEEEEEcCCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHH-C
Confidence                  999999988875             558999999999998866654   48899999999999999999999 7


Q ss_pred             CeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecC-----CcEEEeecCCCccccCCC-CCc
Q psy9184         417 EFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVG-----EKICYYDLSQDEELFEGE-GDY  490 (562)
Q Consensus       417 ~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~-----~g~v~~~l~~~pelF~g~-~~~  490 (562)
                      ||+||||||+|||++.++                    .+||+|||+++....     ....++..|++||.+.+. .+.
T Consensus       116 givH~dikp~NIll~~~~--------------------~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~  175 (323)
T cd05575         116 NIIYRDLKPENILLDSQG--------------------HVVLTDFGLCKEGIEHSKTTSTFCGTPEYLAPEVLRKQPYDR  175 (323)
T ss_pred             CeEeCCCCHHHeEECCCC--------------------cEEEeccCCCcccccCCCccccccCChhhcChhhhcCCCCCc
Confidence            999999999999998886                    799999999976432     223456778999988773 455


Q ss_pred             HHHHHHHhhcccCCCCCCCCCCCh
Q psy9184         491 QFDMYRMMRKQCQNNWQNFTPKNN  514 (562)
Q Consensus       491 q~dIy~lm~~~~~~~W~~~~P~tn  514 (562)
                      ..|||++ |......+.+..|+..
T Consensus       176 ~~Dvwsl-G~il~ell~g~~pf~~  198 (323)
T cd05575         176 TVDWWCL-GAVLYEMLYGLPPFYS  198 (323)
T ss_pred             ccccccc-chhhhhhhcCCCCCCC
Confidence            6899875 4444456666667643

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr

>KOG0589|consensus

Probab=99.93  E-value=7.3e-26  Score=240.10  Aligned_cols=175  Identities=17%  Similarity=0.277  Sum_probs=153.8

Q ss_pred             CCCceeeeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCccccc
Q psy9184         261 SALKNCKKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTEL  334 (562)
Q Consensus       261 ~~y~~~~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~l  334 (562)
                      +.|..++++|+|+||.++++      ..+|+|.|.....      .....+...+|+.+++++.|               
T Consensus         4 ~~Ye~~~~iG~GafG~a~lvrhk~~~~~~vlK~I~l~~~------t~~~r~~A~~E~~lis~~~h---------------   62 (426)
T KOG0589|consen    4 DNYEVLRQVGRGAFGSALLVRHKSDDKLYVLKKINLEKL------TEPERRSAIQEMDLLSKLLH---------------   62 (426)
T ss_pred             chhhhhhhcCccccchhhhhhhccCCceEEEEEEecccc------CchhhHHHHHHHHHHHhccC---------------
Confidence            67899999999999999999      8999999998752      23444578899999999998               


Q ss_pred             ccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCe-EEEEEEecCCCCCccccc-----cCCHHHHHHHHHHHHHH
Q psy9184         335 LKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQ-IFIILELKNGGNDSGDIK-----YRSPNQTYAMILQVVFS  408 (562)
Q Consensus       335 ~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~-l~LVmE~~~gG~ll~~l~-----~l~e~~i~~I~~QIl~a  408 (562)
                                 ||||.+.+.|..             +++ ++|||+||+||++.+.+.     .++++.+..++.|++.|
T Consensus        63 -----------P~iv~y~ds~~~-------------~~~~l~Ivm~Y~eGg~l~~~i~~~k~~~f~E~~i~~~~~Q~~~a  118 (426)
T KOG0589|consen   63 -----------PNIVEYKDSFEE-------------DGQLLCIVMEYCEGGDLAQLIKEQKGVLFPEERILKWFVQILLA  118 (426)
T ss_pred             -----------CCeeeeccchhc-------------CCceEEEEEeecCCCCHHHHHHHHhhccccHHHHHHHHHHHHHH
Confidence                       999999999986             456 999999999998877774     38999999999999999


Q ss_pred             HHHHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecCC-----cEEEeecCCCccc
Q psy9184         409 LAVAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVGE-----KICYYDLSQDEEL  483 (562)
Q Consensus       409 L~yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~~-----g~v~~~l~~~pel  483 (562)
                      |.|||+ .+|+|||||+.||+++.++                    .|+|+|||+|+.....     .+++++.|+-||+
T Consensus       119 v~ylH~-~~iLHRDlK~~Nifltk~~--------------------~VkLgDfGlaK~l~~~~~~a~tvvGTp~YmcPEi  177 (426)
T KOG0589|consen  119 VNYLHE-NRVLHRDLKCANIFLTKDK--------------------KVKLGDFGLAKILNPEDSLASTVVGTPYYMCPEI  177 (426)
T ss_pred             HHHHHh-hhhhcccchhhhhhccccC--------------------ceeecchhhhhhcCCchhhhheecCCCcccCHHH
Confidence            999998 6999999999999999997                    6899999999998874     4889999999999


Q ss_pred             cCC-CCCcHHHHHHHhhcc
Q psy9184         484 FEG-EGDYQFDMYRMMRKQ  501 (562)
Q Consensus       484 F~g-~~~~q~dIy~lm~~~  501 (562)
                      +.+ .+.+..|||++.-..
T Consensus       178 l~d~pYn~KSDiWsLGC~~  196 (426)
T KOG0589|consen  178 LSDIPYNEKSDIWSLGCCL  196 (426)
T ss_pred             hCCCCCCccCcchhhcchH
Confidence            999 577788998864443

>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases

Probab=99.93  E-value=1.4e-25  Score=233.17  Aligned_cols=222  Identities=16%  Similarity=0.195  Sum_probs=159.7

Q ss_pred             eeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcC--CccccCCCCCCccccccccccc
Q psy9184         269 IGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETS--DLQYRTENSTPCFTELLKCSCV  340 (562)
Q Consensus       269 LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~--h~~~~~~n~~p~fv~l~~~~iv  340 (562)
                      ||+|+||.||+|      +.||+|++....     ............|..++..+.  +                     
T Consensus         1 lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~-----~~~~~~~~~~~~e~~~l~~~~~~~---------------------   54 (330)
T cd05586           1 IGKGTFGQVYQVRKKDTRRIYAMKVLSKKE-----IVAKKEVAHTIGERNILVRTLLDE---------------------   54 (330)
T ss_pred             CCCCCceEEEEEEECCCCCEEEEEEEeHHH-----HhhhhHHHHHHHHHHHHHHhccCC---------------------
Confidence            799999999999      789999997542     112233345566777776653  2                     


Q ss_pred             CCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc---cCCHHHHHHHHHHHHHHHHHHHhhCC
Q psy9184         341 RGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK---YRSPNQTYAMILQVVFSLAVAEVELE  417 (562)
Q Consensus       341 ~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~---~l~e~~i~~I~~QIl~aL~yLH~~~~  417 (562)
                          ||+|+.+++.|..             .+.+|+||||+.+|++...+.   .+++..++.++.||+.||+|||+ .|
T Consensus        55 ----~p~i~~~~~~~~~-------------~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qil~al~~LH~-~~  116 (330)
T cd05586          55 ----SPFIVGLKFSFQT-------------DSDLYLVTDYMSGGELFWHLQKEGRFSEDRAKFYIAELVLALEHLHK-YD  116 (330)
T ss_pred             ----CCcCcceEEEEec-------------CCeEEEEEcCCCCChHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHH-CC
Confidence                4999999988875             558999999999998876654   48999999999999999999999 79


Q ss_pred             eEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecC-----CcEEEeecCCCccccCCC--CCc
Q psy9184         418 FEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVG-----EKICYYDLSQDEELFEGE--GDY  490 (562)
Q Consensus       418 IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~-----~g~v~~~l~~~pelF~g~--~~~  490 (562)
                      |+||||||+|||++.++                    .++|+|||+++....     ....++..|++||.+.+.  ...
T Consensus       117 ivHrDlkp~Nili~~~~--------------------~~kl~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~  176 (330)
T cd05586         117 IVYRDLKPENILLDATG--------------------HIALCDFGLSKANLTDNKTTNTFCGTTEYLAPEVLLDEKGYTK  176 (330)
T ss_pred             eEeccCCHHHeEECCCC--------------------CEEEecCCcCcCCCCCCCCccCccCCccccCHHHHcCCCCCCC
Confidence            99999999999999886                    799999999976432     223457789999988753  455


Q ss_pred             HHHHHHHhhcccCCCCCCCCCCChhhhHHHHHHHHhhcccCCCCCCCchhHHHHHHHHHHHhcCCCcCcCC
Q psy9184         491 QFDMYRMMRKQCQNNWQNFTPKNNVFWIHYLVDKATCLKKGYQYLRAPRHQAFELLEELGQNALHFDSCYE  561 (562)
Q Consensus       491 q~dIy~lm~~~~~~~W~~~~P~tn~~wl~yl~~~Ll~~~~~~~~~~~~~~~~~~~l~~l~~~~l~~~s~~~  561 (562)
                      ..|||++ |......+.+..|+........ ...+......++..     ..-..+..|.+.||..+...|
T Consensus       177 ~~Dvwsl-Gvil~elltG~~Pf~~~~~~~~-~~~i~~~~~~~~~~-----~~~~~~~~li~~~L~~~P~~R  240 (330)
T cd05586         177 HVDFWSL-GVLVFEMCCGWSPFYAEDTQQM-YRNIAFGKVRFPKN-----VLSDEGRQFVKGLLNRNPQHR  240 (330)
T ss_pred             ccceecc-ccEEEEeccCCCCCCCCCHHHH-HHHHHcCCCCCCCc-----cCCHHHHHHHHHHcCCCHHHC
Confidence            6999875 5555566677777644332222 22222212222221     113456677788887766554

Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of

>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2

Probab=99.93  E-value=4.4e-25  Score=232.23  Aligned_cols=190  Identities=18%  Similarity=0.227  Sum_probs=146.1

Q ss_pred             CCCceeeeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCccccc
Q psy9184         261 SALKNCKKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTEL  334 (562)
Q Consensus       261 ~~y~~~~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~l  334 (562)
                      .+|++.+.||+|+||.||+|      ..||+|++....      ........+.+|+.+++.++|               
T Consensus        21 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~------~~~~~~~~~~~E~~~l~~l~h---------------   79 (359)
T cd07876          21 KRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPF------QNQTHAKRAYRELVLLKCVNH---------------   79 (359)
T ss_pred             hceEEEEEeecCCCEEEEEEEEcCCCceeEEEEecccc------cchhHHHHHHHHHHHHHhCCC---------------
Confidence            67999999999999999999      789999997542      123334577899999999998               


Q ss_pred             ccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc-cCCHHHHHHHHHHHHHHHHHHH
Q psy9184         335 LKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK-YRSPNQTYAMILQVVFSLAVAE  413 (562)
Q Consensus       335 ~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~-~l~e~~i~~I~~QIl~aL~yLH  413 (562)
                                 |||++++++|....       .......+|+||||+.++ +...+. .+++..+..++.||+.||.|||
T Consensus        80 -----------~niv~~~~~~~~~~-------~~~~~~~~~lv~e~~~~~-l~~~~~~~~~~~~~~~~~~qi~~~L~~LH  140 (359)
T cd07876          80 -----------KNIISLLNVFTPQK-------SLEEFQDVYLVMELMDAN-LCQVIHMELDHERMSYLLYQMLCGIKHLH  140 (359)
T ss_pred             -----------CCEeeeeeeeccCC-------CccccceeEEEEeCCCcC-HHHHHhccCCHHHHHHHHHHHHHHHHHHH
Confidence                       99999998886422       011224689999999854 544433 4889999999999999999999


Q ss_pred             hhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecC----CcEEEeecCCCccccCCC-C
Q psy9184         414 VELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVG----EKICYYDLSQDEELFEGE-G  488 (562)
Q Consensus       414 ~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~----~g~v~~~l~~~pelF~g~-~  488 (562)
                      + .||+||||||+|||++.++                    .+||+|||+++....    ....++..|++||++.+. .
T Consensus       141 ~-~~ivHrDlkp~NIl~~~~~--------------------~~kl~Dfg~a~~~~~~~~~~~~~~t~~y~aPE~~~~~~~  199 (359)
T cd07876         141 S-AGIIHRDLKPSNIVVKSDC--------------------TLKILDFGLARTACTNFMMTPYVVTRYYRAPEVILGMGY  199 (359)
T ss_pred             h-CCcccCCCCHHHEEECCCC--------------------CEEEecCCCccccccCccCCCCcccCCCCCchhccCCCC
Confidence            9 7999999999999999886                    799999999986543    223557789999998773 5


Q ss_pred             CcHHHHHHHhhcccCCCCCCCCCC
Q psy9184         489 DYQFDMYRMMRKQCQNNWQNFTPK  512 (562)
Q Consensus       489 ~~q~dIy~lm~~~~~~~W~~~~P~  512 (562)
                      ....|||++.-. ....+.+..|+
T Consensus       200 ~~~~DiwSlG~i-l~el~tg~~pf  222 (359)
T cd07876         200 KENVDIWSVGCI-MGELVKGSVIF  222 (359)
T ss_pred             CcchhhHHHHHH-HHHHHhCCCCC
Confidence            556899886433 32333444444

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta

Probab=99.93  E-value=1.3e-25  Score=232.62  Aligned_cols=181  Identities=18%  Similarity=0.220  Sum_probs=139.5

Q ss_pred             eeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCccccccccccc
Q psy9184         267 KKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTELLKCSCV  340 (562)
Q Consensus       267 ~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~l~~~~iv  340 (562)
                      +.||+|+||.||+|      ..||+|+++....     ...........|..++..+.+                     
T Consensus         1 ~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~-----~~~~~~~~~~~e~~~l~~~~~---------------------   54 (316)
T cd05620           1 KVLGKGSFGKVLLAELKGKGEYFAVKALKKDVV-----LIDDDVECTMVEKRVLALAWE---------------------   54 (316)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHh-----hhcchHHHHHHHHHHHHhccC---------------------
Confidence            47999999999999      6899999986421     112233556778888876543                     


Q ss_pred             CCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc---cCCHHHHHHHHHHHHHHHHHHHhhCC
Q psy9184         341 RGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK---YRSPNQTYAMILQVVFSLAVAEVELE  417 (562)
Q Consensus       341 ~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~---~l~e~~i~~I~~QIl~aL~yLH~~~~  417 (562)
                          ||+|+++++.|.+             .+.+|+||||+.||++...+.   .+++.++..++.||+.||+|||+ .|
T Consensus        55 ----~~~i~~~~~~~~~-------------~~~~~lv~E~~~~g~L~~~i~~~~~~~~~~~~~~~~qi~~~l~~lH~-~~  116 (316)
T cd05620          55 ----NPFLTHLYCTFQT-------------KEHLFFVMEFLNGGDLMFHIQDKGRFDLYRATFYAAEIVCGLQFLHS-KG  116 (316)
T ss_pred             ----CCCccCeeEEEEe-------------CCEEEEEECCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHH-CC
Confidence                4999999999875             568999999999998876664   48899999999999999999999 79


Q ss_pred             eEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecC-----CcEEEeecCCCccccCCC-CCcH
Q psy9184         418 FEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVG-----EKICYYDLSQDEELFEGE-GDYQ  491 (562)
Q Consensus       418 IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~-----~g~v~~~l~~~pelF~g~-~~~q  491 (562)
                      |+||||||+|||++.++                    .++|+|||+++....     ....++..|++||++.+. .+..
T Consensus       117 ivHrDlkp~Nil~~~~~--------------------~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~  176 (316)
T cd05620         117 IIYRDLKLDNVMLDRDG--------------------HIKIADFGMCKENVFGDNRASTFCGTPDYIAPEILQGLKYTFS  176 (316)
T ss_pred             eEecCCCHHHeEECCCC--------------------CEEeCccCCCeecccCCCceeccCCCcCccCHHHHcCCCCCcc
Confidence            99999999999999886                    799999999975321     223457788999998774 4556


Q ss_pred             HHHHHHhhcccCCCCCCCCCC
Q psy9184         492 FDMYRMMRKQCQNNWQNFTPK  512 (562)
Q Consensus       492 ~dIy~lm~~~~~~~W~~~~P~  512 (562)
                      .|||++.-.. .....+..|+
T Consensus       177 ~DiwslGvil-~el~~g~~Pf  196 (316)
T cd05620         177 VDWWSFGVLL-YEMLIGQSPF  196 (316)
T ss_pred             cchhhhHHHH-HHHHhCCCCC
Confidence            8888754332 2333444454

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I

>KOG1989|consensus

Probab=99.93  E-value=2.4e-25  Score=248.35  Aligned_cols=229  Identities=17%  Similarity=0.195  Sum_probs=170.3

Q ss_pred             CCCCCceeeeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCccc
Q psy9184         259 PSSALKNCKKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFT  332 (562)
Q Consensus       259 ~~~~y~~~~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv  332 (562)
                      ...++++.+.|.+|||+.||+|      ..||+|++-..        +...++.+.+||.+|+.|+.             
T Consensus        35 g~~~v~V~~vLAEGGFa~VYla~~~~~~~~~AlKrm~~~--------de~~L~~v~~EI~~MK~L~g-------------   93 (738)
T KOG1989|consen   35 GSHRVTVEKVLAEGGFAQVYLAQDVKGGKKYALKRMYVN--------DEEALNAVKREIDIMKLLSG-------------   93 (738)
T ss_pred             CCEEEEEEEEEccCCcEEEEEEEecCCCceeeeeeeecC--------CHHHHHHHHHHHHHHHHhcC-------------
Confidence            3456789999999999999999      68999998854        36777899999999999996             


Q ss_pred             ccccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc-----cCCHHHHHHHHHHHHH
Q psy9184         333 ELLKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK-----YRSPNQTYAMILQVVF  407 (562)
Q Consensus       333 ~l~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~-----~l~e~~i~~I~~QIl~  407 (562)
                                  |+|||.+++.......+.      ...-.++|.||||.||.+++.+.     .|++.+++.||.|+++
T Consensus        94 ------------h~nIV~yidss~~~~~~~------~~~~EvllLmEyC~gg~Lvd~mn~Rlq~~lte~eVLkIf~dv~~  155 (738)
T KOG1989|consen   94 ------------HKNIVSYIDSSAINRSSN------NGVWEVLLLMEYCKGGSLVDFMNTRLQTRLTEDEVLKIFYDVCE  155 (738)
T ss_pred             ------------CCceeeEeccccccccCC------CceeEEEeehhhccCCcHHHHHHHHHhccCChHHHHHHHHHHHH
Confidence                        699999998432211110      01246899999999998988774     3999999999999999


Q ss_pred             HHHHHHhhCC--eEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecC--------------Cc
Q psy9184         408 SLAVAEVELE--FEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVG--------------EK  471 (562)
Q Consensus       408 aL~yLH~~~~--IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~--------------~g  471 (562)
                      |+++||. ++  |||||||-|||||..++                    ..||||||.|.-...              ..
T Consensus       156 AVa~mH~-~~pPiIHRDLKiENvLls~~g--------------------~~KLCDFGSatt~~~~~~~~~e~~~ve~eI~  214 (738)
T KOG1989|consen  156 AVAAMHY-LKPPIIHRDLKIENVLLSADG--------------------NYKLCDFGSATTKILSPTSAQEVNYVEEEIE  214 (738)
T ss_pred             HHHHHhc-CCCccchhhhhhhheEEcCCC--------------------CEEeCcccccccccCCCccHHHHHHHHHHHH
Confidence            9999999 78  99999999999999998                    799999999864332              12


Q ss_pred             EEEeecCCCccc---cCC-CCCcHHHHHHHhhccc---------C---------C--CCCCCCCCChhhhHHHHHHHHhh
Q psy9184         472 ICYYDLSQDEEL---FEG-EGDYQFDMYRMMRKQC---------Q---------N--NWQNFTPKNNVFWIHYLVDKATC  527 (562)
Q Consensus       472 ~v~~~l~~~pel---F~g-~~~~q~dIy~lm~~~~---------~---------~--~W~~~~P~tn~~wl~yl~~~Ll~  527 (562)
                      ..-|..|.+||+   |.| .-+.+.|||.+.--..         +         .  ..+.+.++  .--|+.|+..||.
T Consensus       215 k~TTp~YRsPEMIDlysg~pI~eKsDIWALGclLYkLCy~t~PFe~sg~laIlng~Y~~P~~p~y--s~~l~~LI~~mL~  292 (738)
T KOG1989|consen  215 KYTTPQYRSPEMIDLYSGLPIGEKSDIWALGCLLYKLCYFTTPFEESGKLAILNGNYSFPPFPNY--SDRLKDLIRTMLQ  292 (738)
T ss_pred             hhCCccccChHHHhhhcCCCCcchhHHHHHHHHHHHHHHhCCCcCcCcceeEEeccccCCCCccH--HHHHHHHHHHHhc
Confidence            233778899996   455 3456789977533222         0         0  12222222  2347888888888


Q ss_pred             cccCCCCCCCchhHHHHHHHHHHHh
Q psy9184         528 LKKGYQYLRAPRHQAFELLEELGQN  552 (562)
Q Consensus       528 ~~~~~~~~~~~~~~~~~~l~~l~~~  552 (562)
                         .-+..|....+.+..+.++...
T Consensus       293 ---~nP~~RPnI~Qv~~~~~~l~~~  314 (738)
T KOG1989|consen  293 ---PNPDERPNIYQVLEEIFELANK  314 (738)
T ss_pred             ---cCcccCCCHHHHHHHHHHHhcC
Confidence               5566666666666666666554

>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1

Probab=99.93  E-value=5.1e-25  Score=229.98  Aligned_cols=174  Identities=22%  Similarity=0.283  Sum_probs=144.5

Q ss_pred             CCCCCceeeeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCccc
Q psy9184         259 PSSALKNCKKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFT  332 (562)
Q Consensus       259 ~~~~y~~~~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv  332 (562)
                      ..++|++.++||+|+||.||+|      ..+|+|++....       .......+.+|+.+++.++|             
T Consensus         3 ~~~~y~~~~~lg~g~~g~V~~~~~~~~~~~~a~k~~~~~~-------~~~~~~~~~~E~~~l~~l~h-------------   62 (333)
T cd06650           3 KDDDFEKISELGAGNGGVVFKVSHKPSGLIMARKLIHLEI-------KPAIRNQIIRELQVLHECNS-------------   62 (333)
T ss_pred             chhhhheeccccCCCCEEEEEEEECCCCcEEEEEEeeccc-------CHHHHHHHHHHHHHHHHCCC-------------
Confidence            3478999999999999999999      689999988642       12344678899999999998             


Q ss_pred             ccccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc---cCCHHHHHHHHHHHHHHH
Q psy9184         333 ELLKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK---YRSPNQTYAMILQVVFSL  409 (562)
Q Consensus       333 ~l~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~---~l~e~~i~~I~~QIl~aL  409 (562)
                                   |||++++++|.+             ++.+|+||||+.||++.+.+.   .+++..+..++.||+.||
T Consensus        63 -------------~~iv~~~~~~~~-------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~l~~~l  116 (333)
T cd06650          63 -------------PYIVGFYGAFYS-------------DGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGL  116 (333)
T ss_pred             -------------CcccceeEEEEE-------------CCEEEEEEecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHH
Confidence                         999999999875             568999999999998876653   488999999999999999


Q ss_pred             HHHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecC---CcEEEeecCCCccccCC
Q psy9184         410 AVAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVG---EKICYYDLSQDEELFEG  486 (562)
Q Consensus       410 ~yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~---~g~v~~~l~~~pelF~g  486 (562)
                      .|||+..+|+||||||+|||++.++                    .+||+|||+++....   ....++..|++||.+.+
T Consensus       117 ~~lH~~~~ivH~dlkp~Nili~~~~--------------------~~kL~Dfg~~~~~~~~~~~~~~~~~~y~aPE~~~~  176 (333)
T cd06650         117 TYLREKHKIMHRDVKPSNILVNSRG--------------------EIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQG  176 (333)
T ss_pred             HHHHhcCCEEecCCChhhEEEcCCC--------------------CEEEeeCCcchhhhhhccccCCCCccccCHHHhcC
Confidence            9999845799999999999998876                    699999999976543   22345667899999877


Q ss_pred             C-CCcHHHHHHHh
Q psy9184         487 E-GDYQFDMYRMM  498 (562)
Q Consensus       487 ~-~~~q~dIy~lm  498 (562)
                      . .....|+|++.
T Consensus       177 ~~~~~~~DvwslG  189 (333)
T cd06650         177 THYSVQSDIWSMG  189 (333)
T ss_pred             CCCCcHHHHHHHH
Confidence            4 45668998863

Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst

>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha

Probab=99.93  E-value=1.5e-25  Score=233.57  Aligned_cols=188  Identities=16%  Similarity=0.195  Sum_probs=147.1

Q ss_pred             CCCceeeeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCccccc
Q psy9184         261 SALKNCKKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTEL  334 (562)
Q Consensus       261 ~~y~~~~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~l  334 (562)
                      ++|++.++||+|+||.||++      +.+|+|++....     .........+..|+.++..++|               
T Consensus         1 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~-----~~~~~~~~~~~~e~~~l~~~~~---------------   60 (332)
T cd05623           1 EDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWE-----MLKRAETACFREERDVLVNGDN---------------   60 (332)
T ss_pred             CCceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEeHHH-----HHHhhHHHHHHHHHHHHhhCCC---------------
Confidence            36899999999999999999      689999997532     1122333457789999999887               


Q ss_pred             ccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc----cCCHHHHHHHHHHHHHHHH
Q psy9184         335 LKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK----YRSPNQTYAMILQVVFSLA  410 (562)
Q Consensus       335 ~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~----~l~e~~i~~I~~QIl~aL~  410 (562)
                                 ++|+.+++.+.+             ++.+|+||||+.||++.+.+.    .+++..++.++.||+.||.
T Consensus        61 -----------~~i~~~~~~~~~-------------~~~~~lv~ey~~~g~L~~~l~~~~~~l~~~~~~~~~~qi~~al~  116 (332)
T cd05623          61 -----------QWITTLHYAFQD-------------ENNLYLVMDYYVGGDLLTLLSKFEDRLPEDMARFYLAEMVIAID  116 (332)
T ss_pred             -----------CCEeeEEEEEec-------------CCEEEEEEeccCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHH
Confidence                       999999988875             568999999999998877763    3789999999999999999


Q ss_pred             HHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecCC------cEEEeecCCCcccc
Q psy9184         411 VAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVGE------KICYYDLSQDEELF  484 (562)
Q Consensus       411 yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~~------g~v~~~l~~~pelF  484 (562)
                      |||+ .+|+||||||+|||++.++                    .++|+|||+++.....      ..+++..|++||++
T Consensus       117 ~lH~-~~iiHrDlkp~Nili~~~~--------------------~~kL~DfG~a~~~~~~~~~~~~~~~gt~~y~aPE~~  175 (332)
T cd05623         117 SVHQ-LHYVHRDIKPDNILMDMNG--------------------HIRLADFGSCLKLMEDGTVQSSVAVGTPDYISPEIL  175 (332)
T ss_pred             HHHH-CCeEecCCCHHHEEECCCC--------------------CEEEeecchheecccCCcceecccccCccccCHHHH
Confidence            9999 7999999999999998876                    7999999999765432      23457789999987


Q ss_pred             CC------CCCcHHHHHHHhhcccCCCCCCCCCCCh
Q psy9184         485 EG------EGDYQFDMYRMMRKQCQNNWQNFTPKNN  514 (562)
Q Consensus       485 ~g------~~~~q~dIy~lm~~~~~~~W~~~~P~tn  514 (562)
                      .+      ......|||++ |..+...+.+..|+..
T Consensus       176 ~~~~~~~~~~~~~~DvwSl-Gvil~ell~g~~Pf~~  210 (332)
T cd05623         176 QAMEDGKGKYGPECDWWSL-GVCMYEMLYGETPFYA  210 (332)
T ss_pred             hccccCCCCCCCcCCEEee-HHHHHHHhcCCCCCCC
Confidence            53      23445788764 3333344455556543

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw

>PTZ00036 glycogen synthase kinase; Provisional

Probab=99.93  E-value=4.7e-25  Score=239.55  Aligned_cols=190  Identities=15%  Similarity=0.146  Sum_probs=141.5

Q ss_pred             CCCCCceeeeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCccc
Q psy9184         259 PSSALKNCKKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFT  332 (562)
Q Consensus       259 ~~~~y~~~~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv  332 (562)
                      +..+|++.++||+|+||.||+|      +.||||++....            ....+|+.+++.++|             
T Consensus        64 ~~~~y~~~~~LG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~------------~~~~~Ei~il~~l~h-------------  118 (440)
T PTZ00036         64 PNKSYKLGNIIGNGSFGVVYEAICIDTSEKVAIKKVLQDP------------QYKNRELLIMKNLNH-------------  118 (440)
T ss_pred             cCCeEEEeEEEEeCCCEEEEEEEECCCCCEEEEEEEecCc------------chHHHHHHHHHhcCC-------------
Confidence            4467999999999999999999      789999886432            123479999999998             


Q ss_pred             ccccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCcccc-------ccCCHHHHHHHHHHH
Q psy9184         333 ELLKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDI-------KYRSPNQTYAMILQV  405 (562)
Q Consensus       333 ~l~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l-------~~l~e~~i~~I~~QI  405 (562)
                                   |||++++++|....-.     .......+++||||++++ +...+       ..+++..++.++.||
T Consensus       119 -------------~niv~l~~~~~~~~~~-----~~~~~~~l~lvmE~~~~~-l~~~~~~~~~~~~~l~~~~~~~~~~qi  179 (440)
T PTZ00036        119 -------------INIIFLKDYYYTECFK-----KNEKNIFLNVVMEFIPQT-VHKYMKHYARNNHALPLFLVKLYSYQL  179 (440)
T ss_pred             -------------CCCcceeeeEeecccc-----cCCCceEEEEEEecCCcc-HHHHHHHHhhcCCCCCHHHHHHHHHHH
Confidence                         8888888776431100     000123578999999854 43333       238899999999999


Q ss_pred             HHHHHHHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecC----CcEEEeecCCCc
Q psy9184         406 VFSLAVAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVG----EKICYYDLSQDE  481 (562)
Q Consensus       406 l~aL~yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~----~g~v~~~l~~~p  481 (562)
                      +.||+|||+ .+|+||||||+|||++..+.                   .+||+|||+|+....    ...+++..|++|
T Consensus       180 ~~gL~yLH~-~~IiHrDLKp~NILl~~~~~-------------------~vkL~DFGla~~~~~~~~~~~~~~t~~y~aP  239 (440)
T PTZ00036        180 CRALAYIHS-KFICHRDLKPQNLLIDPNTH-------------------TLKLCDFGSAKNLLAGQRSVSYICSRFYRAP  239 (440)
T ss_pred             HHHHHHHHH-CCEecCCcCHHHEEEcCCCC-------------------ceeeeccccchhccCCCCcccCCCCcCccCH
Confidence            999999999 79999999999999987642                   699999999987643    233457789999


Q ss_pred             cccCCC--CCcHHHHHHHhhcccCCCCCCCCCCC
Q psy9184         482 ELFEGE--GDYQFDMYRMMRKQCQNNWQNFTPKN  513 (562)
Q Consensus       482 elF~g~--~~~q~dIy~lm~~~~~~~W~~~~P~t  513 (562)
                      |++.+.  .....|||++.-.. .....+..|+.
T Consensus       240 E~~~~~~~~~~~~DiwSlGvil-~elltG~~pf~  272 (440)
T PTZ00036        240 ELMLGATNYTTHIDLWSLGCII-AEMILGYPIFS  272 (440)
T ss_pred             HHhcCCCCCCcHHHHHHHHHHH-HHHHhCCCCCC
Confidence            988764  45669999864333 33444555553

>KOG0666|consensus

Probab=99.93  E-value=3.8e-26  Score=228.98  Aligned_cols=192  Identities=22%  Similarity=0.366  Sum_probs=154.7

Q ss_pred             CCceeeeeeccCceEEEEE----------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCcc
Q psy9184         262 ALKNCKKIGEGVYGEVFKL----------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCF  331 (562)
Q Consensus       262 ~y~~~~~LG~GsfG~Vyka----------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~f  331 (562)
                      .|+.+..||+|+||.||+|          ..+|||.++-+..  ..+..    ....+|+.++++|+|            
T Consensus        25 ~ye~ig~Ig~GTYG~VykA~~~~~n~kr~k~yAiKkfk~~kd--~tGiS----~SAcREiaL~REl~h------------   86 (438)
T KOG0666|consen   25 EYEGIGKIGRGTYGKVYKAVRKNTNDKRTKEYAIKKFKGEKD--GTGIS----MSACREIALLRELKH------------   86 (438)
T ss_pred             HhhccceecccccceeeEeeeccCCcccchhhHHHHHhccCC--CCCcC----HHHHHHHHHHHHhcC------------
Confidence            4889999999999999999          4899999886531  11222    356789999999999            


Q ss_pred             cccccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc--------cCCHHHHHHHHH
Q psy9184         332 TELLKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK--------YRSPNQTYAMIL  403 (562)
Q Consensus       332 v~l~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~--------~l~e~~i~~I~~  403 (562)
                                    ||++.+..+|..            .+..+|+++||.+. ++++-+.        .++...++.|++
T Consensus        87 --------------~nvi~Lv~Vfl~------------~d~~v~l~fdYAEh-DL~~II~fHr~~~~~~lp~~mvKsilw  139 (438)
T KOG0666|consen   87 --------------PNVISLVKVFLS------------HDKKVWLLFDYAEH-DLWHIIKFHRASKAKQLPRSMVKSILW  139 (438)
T ss_pred             --------------CcchhHHHHHhc------------cCceEEEEehhhhh-hHHHHHHHhccchhccCCHHHHHHHHH
Confidence                          999999999975            36689999999974 3554443        288899999999


Q ss_pred             HHHHHHHHHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecC--------------
Q psy9184         404 QVVFSLAVAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVG--------------  469 (562)
Q Consensus       404 QIl~aL~yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~--------------  469 (562)
                      ||+.|++|||+ .=|+||||||.|||+..++.+.               | .|||+|||+||.+..              
T Consensus       140 Qil~Gv~YLH~-NWvlHRDLKPaNIlvmgdgper---------------G-~VKIaDlGlaR~~~~plkpl~s~d~VVVT  202 (438)
T KOG0666|consen  140 QILDGVHYLHS-NWVLHRDLKPANILVMGDGPER---------------G-RVKIADLGLARLFNNPLKPLASLDPVVVT  202 (438)
T ss_pred             HHHhhhHHHhh-hheeeccCCcceEEEeccCCcc---------------C-eeEeecccHHHHhhccccccccCCceEEE
Confidence            99999999999 5899999999999999986432               2 799999999998764              


Q ss_pred             -----------------------CcEEEeecCCCccccCCCC-------CcH----HHHHHHhhcccCCCCCCCCCCChh
Q psy9184         470 -----------------------EKICYYDLSQDEELFEGEG-------DYQ----FDMYRMMRKQCQNNWQNFTPKNNV  515 (562)
Q Consensus       470 -----------------------~g~v~~~l~~~pelF~g~~-------~~q----~dIy~lm~~~~~~~W~~~~P~tn~  515 (562)
                                             .||+++++.+..++|.|..       -++    -.||.++|.|....|+.....+..
T Consensus       203 iWYRAPELLLGa~hYT~AiDvWAiGCIfaElLtl~PlF~g~E~k~~~~~Pfq~dQl~rIf~vLG~Pt~~~Wp~lkk~Pe~  282 (438)
T KOG0666|consen  203 IWYRAPELLLGARHYTKAIDVWAIGCIFAELLTLEPLFKGREEKIKTKNPFQHDQLDRIFEVLGTPTDKDWPDLKKMPEY  282 (438)
T ss_pred             EEecChHHhcccccccchhhhHHHHHHHHHHHccCccccchhhhcccCCCchHHHHHHHHHHcCCCccccchhhhhCcch
Confidence                                   5788888888888888732       122    568899999999999887665443

>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3

Probab=99.92  E-value=3e-25  Score=230.42  Aligned_cols=182  Identities=19%  Similarity=0.251  Sum_probs=142.1

Q ss_pred             eeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHH-HHHhcCCccccCCCCCCcccccccccc
Q psy9184         267 KKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIM-VTKETSDLQYRTENSTPCFTELLKCSC  339 (562)
Q Consensus       267 ~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~-ilk~L~h~~~~~~n~~p~fv~l~~~~i  339 (562)
                      +.||+|+||+||+|      +.||+|++....     .........+..|.. +++.++|                    
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~-----~~~~~~~~~~~~e~~~~l~~~~h--------------------   55 (325)
T cd05604           1 KVIGKGSFGKVLLAKRKLDGKCYAVKVLQKKI-----VLNRKEQKHIMAERNVLLKNVKH--------------------   55 (325)
T ss_pred             CceeeCCCeEEEEEEECCCCCEEEEEEEEHHH-----hhhhhHHHHHHHHHHHHHHhCCC--------------------
Confidence            46999999999999      689999998642     112233345566665 4666777                    


Q ss_pred             cCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc---cCCHHHHHHHHHHHHHHHHHHHhhC
Q psy9184         340 VRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK---YRSPNQTYAMILQVVFSLAVAEVEL  416 (562)
Q Consensus       340 v~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~---~l~e~~i~~I~~QIl~aL~yLH~~~  416 (562)
                            |||+++++.|..             ++.+|+||||+.||++...+.   .+++.++..++.||+.||+|||+ .
T Consensus        56 ------p~iv~~~~~~~~-------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~al~~lH~-~  115 (325)
T cd05604          56 ------PFLVGLHYSFQT-------------TEKLYFVLDFVNGGELFFHLQRERSFPEPRARFYAAEIASALGYLHS-I  115 (325)
T ss_pred             ------CCCccEEEEEec-------------CCEEEEEEcCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHH-C
Confidence                  999999988875             568999999999998876653   48899999999999999999999 7


Q ss_pred             CeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecC-----CcEEEeecCCCccccCCC-CCc
Q psy9184         417 EFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVG-----EKICYYDLSQDEELFEGE-GDY  490 (562)
Q Consensus       417 ~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~-----~g~v~~~l~~~pelF~g~-~~~  490 (562)
                      ||+||||||+|||++.++                    .+||+|||+++....     ....++..|++||++.+. .+.
T Consensus       116 givH~Dlkp~NIll~~~~--------------------~~kL~DfG~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~  175 (325)
T cd05604         116 NIVYRDLKPENILLDSQG--------------------HVVLTDFGLCKEGIAQSDTTTTFCGTPEYLAPEVIRKQPYDN  175 (325)
T ss_pred             CeeecCCCHHHeEECCCC--------------------CEEEeecCCcccCCCCCCCcccccCChhhCCHHHHcCCCCCC
Confidence            999999999999999886                    799999999986432     223456778999988774 456


Q ss_pred             HHHHHHHhhcccCCCCCCCCCCCh
Q psy9184         491 QFDMYRMMRKQCQNNWQNFTPKNN  514 (562)
Q Consensus       491 q~dIy~lm~~~~~~~W~~~~P~tn  514 (562)
                      +.|||++ |......+.+..|+..
T Consensus       176 ~~Dvwsl-G~il~el~~G~~pf~~  198 (325)
T cd05604         176 TVDWWCL-GAVLYEMLYGLPPFYC  198 (325)
T ss_pred             cCccccc-cceehhhhcCCCCCCC
Confidence            6899875 4444456666667643

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,

>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3

Probab=99.92  E-value=3.2e-25  Score=232.70  Aligned_cols=179  Identities=21%  Similarity=0.276  Sum_probs=142.7

Q ss_pred             CCCceeeeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCccccc
Q psy9184         261 SALKNCKKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTEL  334 (562)
Q Consensus       261 ~~y~~~~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~l  334 (562)
                      ++|++.+.||+|+||.||+|      +.||+|++....      ........+.+|+.+++.++|               
T Consensus        17 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~------~~~~~~~~~~~E~~~l~~l~h---------------   75 (355)
T cd07874          17 KRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPF------QNQTHAKRAYRELVLMKCVNH---------------   75 (355)
T ss_pred             hceeEEEEeeecCCEEEEEEEecCCCceEEEEEeCCcc------cChHHHHHHHHHHHHHHHhCC---------------
Confidence            67999999999999999999      789999987542      123344677899999999998               


Q ss_pred             ccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc-cCCHHHHHHHHHHHHHHHHHHH
Q psy9184         335 LKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK-YRSPNQTYAMILQVVFSLAVAE  413 (562)
Q Consensus       335 ~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~-~l~e~~i~~I~~QIl~aL~yLH  413 (562)
                                 |||++++++|....       ........|+||||++++ +...+. .+++..+..++.||+.||.|||
T Consensus        76 -----------~niv~~~~~~~~~~-------~~~~~~~~~lv~e~~~~~-l~~~~~~~l~~~~~~~~~~qi~~aL~~LH  136 (355)
T cd07874          76 -----------KNIISLLNVFTPQK-------SLEEFQDVYLVMELMDAN-LCQVIQMELDHERMSYLLYQMLCGIKHLH  136 (355)
T ss_pred             -----------Cchhceeeeeeccc-------cccccceeEEEhhhhccc-HHHHHhhcCCHHHHHHHHHHHHHHHHHHH
Confidence                       89999988876421       111234689999999854 544443 4889999999999999999999


Q ss_pred             hhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecC----CcEEEeecCCCccccCCC-C
Q psy9184         414 VELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVG----EKICYYDLSQDEELFEGE-G  488 (562)
Q Consensus       414 ~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~----~g~v~~~l~~~pelF~g~-~  488 (562)
                      + .||+||||||+|||++.++                    .+||+|||+++....    ...+++..|++||++.+. .
T Consensus       137 ~-~givHrDikp~Nill~~~~--------------------~~kl~Dfg~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~  195 (355)
T cd07874         137 S-AGIIHRDLKPSNIVVKSDC--------------------TLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGY  195 (355)
T ss_pred             h-CCcccCCCChHHEEECCCC--------------------CEEEeeCcccccCCCccccCCccccCCccCHHHHcCCCC
Confidence            9 7999999999999998876                    799999999987654    234567789999998774 4


Q ss_pred             CcHHHHHHHhhc
Q psy9184         489 DYQFDMYRMMRK  500 (562)
Q Consensus       489 ~~q~dIy~lm~~  500 (562)
                      ....|||++.-.
T Consensus       196 ~~~~DiwslG~i  207 (355)
T cd07874         196 KENVDIWSVGCI  207 (355)
T ss_pred             CchhhHHHHHHH
Confidence            566899886433

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok

>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases

Probab=99.92  E-value=4.8e-25  Score=224.27  Aligned_cols=186  Identities=16%  Similarity=0.151  Sum_probs=145.9

Q ss_pred             CCceeeeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCcccccc
Q psy9184         262 ALKNCKKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTELL  335 (562)
Q Consensus       262 ~y~~~~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~l~  335 (562)
                      .|++.++||+|+||.||++      +.||+|++....     .........+.+|+.+++.++|                
T Consensus         1 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-----~~~~~~~~~~~~E~~~l~~l~h----------------   59 (285)
T cd05605           1 TFRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKR-----IKKRKGEAMALNEKQILEKVNS----------------   59 (285)
T ss_pred             CceEEEEEecCCCeEEEEEEEcCCCceEEEEEEehhh-----hhhhhhHHHHHHHHHHHHhcCC----------------
Confidence            3788999999999999999      689999997542     1112223456789999999998                


Q ss_pred             cccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc-----cCCHHHHHHHHHHHHHHHH
Q psy9184         336 KCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK-----YRSPNQTYAMILQVVFSLA  410 (562)
Q Consensus       336 ~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~-----~l~e~~i~~I~~QIl~aL~  410 (562)
                                |||+.+++.+..             ++.+|+||||+.||++.+.+.     .+++..+..++.|++.||.
T Consensus        60 ----------~~iv~~~~~~~~-------------~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~  116 (285)
T cd05605          60 ----------RFVVSLAYAYET-------------KDALCLVLTLMNGGDLKFHIYNMGNPGFDEERAVFYAAEITCGLE  116 (285)
T ss_pred             ----------CCEeeeeeeecC-------------CCeEEEEEeccCCCcHHHHHHhcCcCCCCHHHHHHHHHHHHHHHH
Confidence                      999999988865             458999999999998765442     3889999999999999999


Q ss_pred             HHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecCC----cEEEeecCCCccccCC
Q psy9184         411 VAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVGE----KICYYDLSQDEELFEG  486 (562)
Q Consensus       411 yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~~----g~v~~~l~~~pelF~g  486 (562)
                      |||+ .+|+||||||+|||++..+                    .++|+|||+++.....    +.+++..|++||++.+
T Consensus       117 ~lH~-~~ivH~dlkp~Nil~~~~~--------------------~~~l~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~  175 (285)
T cd05605         117 DLHR-ERIVYRDLKPENILLDDYG--------------------HIRISDLGLAVEIPEGETIRGRVGTVGYMAPEVVKN  175 (285)
T ss_pred             HHHH-CCcEecCCCHHHEEECCCC--------------------CEEEeeCCCceecCCCCccccccCCCCccCcHHhcC
Confidence            9999 7999999999999998876                    7999999999875432    2244667899998876


Q ss_pred             C-CCcHHHHHHHhhcccCCCCCCCCCCC
Q psy9184         487 E-GDYQFDMYRMMRKQCQNNWQNFTPKN  513 (562)
Q Consensus       487 ~-~~~q~dIy~lm~~~~~~~W~~~~P~t  513 (562)
                      . .+...|||++ |......+.+..|+.
T Consensus       176 ~~~~~~~Diws~-G~~l~el~~g~~pf~  202 (285)
T cd05605         176 ERYTFSPDWWGL-GCLIYEMIEGKSPFR  202 (285)
T ss_pred             CCCCccccchhH-HHHHHHHHHCCCCCC
Confidence            3 4445788875 333334445555553

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,

>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta

Probab=99.92  E-value=3.7e-25  Score=229.39  Aligned_cols=181  Identities=19%  Similarity=0.212  Sum_probs=139.7

Q ss_pred             eeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCccccccccccc
Q psy9184         267 KKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTELLKCSCV  340 (562)
Q Consensus       267 ~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~l~~~~iv  340 (562)
                      +.||+|+||.||+|      +.||+|+++...     ............|..+++.+.+                     
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~-----~~~~~~~~~~~~e~~~l~~~~~---------------------   54 (316)
T cd05619           1 KMLGKGSFGKVFLAELKGTNQFFAIKALKKDV-----VLMDDDVECTMVEKRVLSLAWE---------------------   54 (316)
T ss_pred             CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHH-----hhhcchHHHHHHHHHHHHhccC---------------------
Confidence            47999999999999      689999998642     1112233456778888876533                     


Q ss_pred             CCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc---cCCHHHHHHHHHHHHHHHHHHHhhCC
Q psy9184         341 RGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK---YRSPNQTYAMILQVVFSLAVAEVELE  417 (562)
Q Consensus       341 ~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~---~l~e~~i~~I~~QIl~aL~yLH~~~~  417 (562)
                          ||||+++++++.+             .+.+|+||||++||++...+.   .+++.++..++.||+.||.|||+ .|
T Consensus        55 ----hp~iv~~~~~~~~-------------~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~al~~LH~-~~  116 (316)
T cd05619          55 ----HPFLTHLYCTFQT-------------KENLFFVMEYLNGGDLMFHIQSCHKFDLPRATFYAAEIICGLQFLHS-KG  116 (316)
T ss_pred             ----CCcCcceEEEEEe-------------CCEEEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHh-CC
Confidence                4999999999875             558999999999998877664   48899999999999999999999 79


Q ss_pred             eEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecC-----CcEEEeecCCCccccCCC-CCcH
Q psy9184         418 FEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVG-----EKICYYDLSQDEELFEGE-GDYQ  491 (562)
Q Consensus       418 IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~-----~g~v~~~l~~~pelF~g~-~~~q  491 (562)
                      |+||||||+|||++.++                    .++|+|||+++....     ....++..|++||++.+. .+..
T Consensus       117 ivHrdikp~Nil~~~~~--------------------~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~  176 (316)
T cd05619         117 IVYRDLKLDNILLDTDG--------------------HIKIADFGMCKENMLGDAKTCTFCGTPDYIAPEILLGQKYNTS  176 (316)
T ss_pred             eEeCCCCHHHEEECCCC--------------------CEEEccCCcceECCCCCCceeeecCCccccCHHHHcCCCCCch
Confidence            99999999999999886                    799999999986422     223456779999998773 4566


Q ss_pred             HHHHHHhhcccCCCCCCCCCC
Q psy9184         492 FDMYRMMRKQCQNNWQNFTPK  512 (562)
Q Consensus       492 ~dIy~lm~~~~~~~W~~~~P~  512 (562)
                      .|||++.-... ....+..|+
T Consensus       177 ~DvwslG~il~-el~~G~~pf  196 (316)
T cd05619         177 VDWWSFGVLLY-EMLIGQSPF  196 (316)
T ss_pred             hhhhhHHHHHH-HHHhCCCCC
Confidence            89988643333 233344454

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in

>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1

Probab=99.92  E-value=2.7e-25  Score=230.67  Aligned_cols=181  Identities=20%  Similarity=0.259  Sum_probs=138.2

Q ss_pred             eeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHH-HHHhcCCccccCCCCCCcccccccccc
Q psy9184         267 KKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIM-VTKETSDLQYRTENSTPCFTELLKCSC  339 (562)
Q Consensus       267 ~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~-ilk~L~h~~~~~~n~~p~fv~l~~~~i  339 (562)
                      +.||+|+||.||+|      +.||+|++....     .........+..|.. +++.++|                    
T Consensus         1 ~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~-----~~~~~~~~~~~~e~~~~l~~~~h--------------------   55 (325)
T cd05602           1 KVIGKGSFGKVLLARHKAEEKFYAVKVLQKKA-----ILKKKEEKHIMSERNVLLKNVKH--------------------   55 (325)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHH-----HHhhhHHHHHHHHHHHHHHhCCC--------------------
Confidence            46999999999999      679999998542     111222234455554 4677777                    


Q ss_pred             cCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc---cCCHHHHHHHHHHHHHHHHHHHhhC
Q psy9184         340 VRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK---YRSPNQTYAMILQVVFSLAVAEVEL  416 (562)
Q Consensus       340 v~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~---~l~e~~i~~I~~QIl~aL~yLH~~~  416 (562)
                            |||+++++.|..             ++.+|+||||+.||++...+.   .+++..+..++.||+.||.|||+ .
T Consensus        56 ------~~Iv~~~~~~~~-------------~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~-~  115 (325)
T cd05602          56 ------PFLVGLHFSFQT-------------ADKLYFVLDYINGGELFYHLQRERCFLEPRARFYAAEIASALGYLHS-L  115 (325)
T ss_pred             ------CCCCceeEEEEc-------------CCeEEEEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHH-C
Confidence                  999999988875             568999999999998876664   37889999999999999999999 7


Q ss_pred             CeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecC-----CcEEEeecCCCccccCCC-CCc
Q psy9184         417 EFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVG-----EKICYYDLSQDEELFEGE-GDY  490 (562)
Q Consensus       417 ~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~-----~g~v~~~l~~~pelF~g~-~~~  490 (562)
                      ||+||||||+|||++.++                    .++|+|||+|+....     ...+++..|++||++.+. .+.
T Consensus       116 giiHrDlkp~Nili~~~~--------------------~~kl~DfG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~  175 (325)
T cd05602         116 NIVYRDLKPENILLDSQG--------------------HIVLTDFGLCKENIEHNGTTSTFCGTPEYLAPEVLHKQPYDR  175 (325)
T ss_pred             CeEecCCCHHHeEECCCC--------------------CEEEccCCCCcccccCCCCcccccCCccccCHHHHcCCCCCC
Confidence            999999999999998876                    799999999986432     223457789999988774 455


Q ss_pred             HHHHHHHhhcccCCCCCCCCCCC
Q psy9184         491 QFDMYRMMRKQCQNNWQNFTPKN  513 (562)
Q Consensus       491 q~dIy~lm~~~~~~~W~~~~P~t  513 (562)
                      ..|||++. ........+..|+.
T Consensus       176 ~~DiwslG-~il~el~~g~~pf~  197 (325)
T cd05602         176 TVDWWCLG-AVLYEMLYGLPPFY  197 (325)
T ss_pred             cccccccc-HHHHHHhcCCCCCC
Confidence            68888753 33334445555553

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt

>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1

Probab=99.92  E-value=3e-25  Score=225.17  Aligned_cols=165  Identities=19%  Similarity=0.225  Sum_probs=134.6

Q ss_pred             eeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCcccccccccccCC
Q psy9184         269 IGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTELLKCSCVRG  342 (562)
Q Consensus       269 LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~l~~~~iv~g  342 (562)
                      ||+|+||+||+|      +.||+|.+....     .......+.+..|+.+++.++|                       
T Consensus         1 lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~-----~~~~~~~~~~~~E~~il~~l~~-----------------------   52 (280)
T cd05608           1 LGKGGFGEVSACQMRATGKLYACKKLNKKR-----LKKRKGYEGAMVEKRILAKVHS-----------------------   52 (280)
T ss_pred             CCCCCceeEEEEEEccCCcEEEEEeeeHHH-----HhhhHHHHHHHHHHHHHHhCCC-----------------------
Confidence            799999999998      689999987643     1223344667889999999988                       


Q ss_pred             CCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCcccc-------ccCCHHHHHHHHHHHHHHHHHHHhh
Q psy9184         343 RYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDI-------KYRSPNQTYAMILQVVFSLAVAEVE  415 (562)
Q Consensus       343 ~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l-------~~l~e~~i~~I~~QIl~aL~yLH~~  415 (562)
                         |||+++.+.|..             ++.+|+||||++||++...+       ..+++..+..++.||+.||.|||+ 
T Consensus        53 ---~~i~~~~~~~~~-------------~~~~~lv~e~~~~g~L~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~-  115 (280)
T cd05608          53 ---RFIVSLAYAFQT-------------KTDLCLVMTIMNGGDLRYHIYNVDEENPGFPEPRACFYTAQIISGLEHLHQ-  115 (280)
T ss_pred             ---CcEeeeeEEEcC-------------CCeEEEEEeCCCCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHH-
Confidence               999999988875             55899999999999875433       238899999999999999999999 


Q ss_pred             CCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecCC-----cEEEeecCCCccccCCC-CC
Q psy9184         416 LEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVGE-----KICYYDLSQDEELFEGE-GD  489 (562)
Q Consensus       416 ~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~~-----g~v~~~l~~~pelF~g~-~~  489 (562)
                      .+|+||||||+|||++.++                    .++|+|||+++.....     +..++..|++||.+.+. .+
T Consensus       116 ~~i~H~dlkp~Nili~~~~--------------------~~~l~dfg~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~  175 (280)
T cd05608         116 RRIIYRDLKPENVLLDNDG--------------------NVRISDLGLAVELKDGQSKTKGYAGTPGFMAPELLQGEEYD  175 (280)
T ss_pred             CCcccCCCCHHHEEECCCC--------------------CEEEeeCccceecCCCCccccccCCCcCccCHHHhcCCCCC
Confidence            7999999999999998876                    6999999999875432     23456678999988763 45


Q ss_pred             cHHHHHHHh
Q psy9184         490 YQFDMYRMM  498 (562)
Q Consensus       490 ~q~dIy~lm  498 (562)
                      ...|+|++.
T Consensus       176 ~~~DvwslG  184 (280)
T cd05608         176 FSVDYFALG  184 (280)
T ss_pred             ccccHHHHH
Confidence            568998863

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g

>PHA03212 serine/threonine kinase US3; Provisional

Probab=99.92  E-value=6.9e-25  Score=234.76  Aligned_cols=164  Identities=15%  Similarity=0.113  Sum_probs=136.9

Q ss_pred             CCCCceeeeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCcccc
Q psy9184         260 SSALKNCKKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTE  333 (562)
Q Consensus       260 ~~~y~~~~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~  333 (562)
                      ..+|++.+.||+|+||.||+|      +.||+|....              ..+.+|+.+++.|+|              
T Consensus        91 ~~~y~~~~~lg~G~~g~V~~~~d~~~~~~vaiK~~~~--------------~~~~~E~~il~~l~H--------------  142 (391)
T PHA03212         91 KAGFSILETFTPGAEGFAFACIDNKTCEHVVIKAGQR--------------GGTATEAHILRAINH--------------  142 (391)
T ss_pred             cCCcEEEEEEcCCCCeEEEEEEECCCCCEEEEechhh--------------hhhHHHHHHHHhCCC--------------
Confidence            367999999999999999999      7899996542              245789999999998              


Q ss_pred             cccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc---cCCHHHHHHHHHHHHHHHH
Q psy9184         334 LLKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK---YRSPNQTYAMILQVVFSLA  410 (562)
Q Consensus       334 l~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~---~l~e~~i~~I~~QIl~aL~  410 (562)
                                  |||++++++|..             +...++|||++. ++++..+.   .+++.+++.++.||+.||.
T Consensus       143 ------------pnIv~~~~~~~~-------------~~~~~lv~e~~~-~~L~~~l~~~~~l~~~~~~~i~~qi~~aL~  196 (391)
T PHA03212        143 ------------PSIIQLKGTFTY-------------NKFTCLILPRYK-TDLYCYLAAKRNIAICDILAIERSVLRAIQ  196 (391)
T ss_pred             ------------CCCCCEeEEEEE-------------CCeeEEEEecCC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHH
Confidence                        999999998875             458899999996 55655543   4889999999999999999


Q ss_pred             HHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecC------CcEEEeecCCCcccc
Q psy9184         411 VAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVG------EKICYYDLSQDEELF  484 (562)
Q Consensus       411 yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~------~g~v~~~l~~~pelF  484 (562)
                      |||+ .||+||||||+|||++..+                    .++|+|||+|+....      .+..++..|++||++
T Consensus       197 ylH~-~~IvHrDiKP~NIll~~~~--------------------~vkL~DFG~a~~~~~~~~~~~~~~~gt~~y~aPE~~  255 (391)
T PHA03212        197 YLHE-NRIIHRDIKAENIFINHPG--------------------DVCLGDFGAACFPVDINANKYYGWAGTIATNAPELL  255 (391)
T ss_pred             HHHh-CCcccCCCChHhEEEcCCC--------------------CEEEEeCCcccccccccccccccccCccCCCChhhh
Confidence            9999 7999999999999999876                    699999999975432      234567888999998


Q ss_pred             CCC-CCcHHHHHHHh
Q psy9184         485 EGE-GDYQFDMYRMM  498 (562)
Q Consensus       485 ~g~-~~~q~dIy~lm  498 (562)
                      .+. .....|||++.
T Consensus       256 ~~~~~~~~~DiwSlG  270 (391)
T PHA03212        256 ARDPYGPAVDIWSAG  270 (391)
T ss_pred             cCCCCCcHHHHHHHH
Confidence            763 56679999864

>PTZ00283 serine/threonine protein kinase; Provisional

Probab=99.92  E-value=1e-24  Score=240.42  Aligned_cols=195  Identities=18%  Similarity=0.235  Sum_probs=150.0

Q ss_pred             CCCCCceeeeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCccc
Q psy9184         259 PSSALKNCKKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFT  332 (562)
Q Consensus       259 ~~~~y~~~~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv  332 (562)
                      ...+|.+.+.||+|+||.||+|      +.||||++....      ........+.+|+.++..++|             
T Consensus        30 ~~~rY~i~~~LG~G~fG~Vy~a~~~~~g~~vAvK~i~~~~------~~~~~~~~~~~Ei~~l~~~~h-------------   90 (496)
T PTZ00283         30 QAKKYWISRVLGSGATGTVLCAKRVSDGEPFAVKVVDMEG------MSEADKNRAQAEVCCLLNCDF-------------   90 (496)
T ss_pred             cCCCEEEEEEEecCCCEEEEEEEEcCCCCEEEEEEEeccc------CCHHHHHHHHHHHHHHhcCCC-------------
Confidence            4478999999999999999999      789999998653      123445677899999999988             


Q ss_pred             ccccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc-------cCCHHHHHHHHHHH
Q psy9184         333 ELLKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK-------YRSPNQTYAMILQV  405 (562)
Q Consensus       333 ~l~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~-------~l~e~~i~~I~~QI  405 (562)
                                   ++++++++.|......     .......+++||||+++|++.+.+.       .+++..+..++.||
T Consensus        91 -------------~~iv~~~~~~~~~~~~-----~~~~~~~i~lV~Ey~~~gsL~~~l~~~~~~~~~l~e~~~~~i~~ql  152 (496)
T PTZ00283         91 -------------FSIVKCHEDFAKKDPR-----NPENVLMIALVLDYANAGDLRQEIKSRAKTNRTFREHEAGLLFIQV  152 (496)
T ss_pred             -------------CcEEEeecceeccccc-----CcccceEEEEEEeCCCCCcHHHHHHHhhccCCCCCHHHHHHHHHHH
Confidence                         8999888776542100     0011225789999999998876553       38899999999999


Q ss_pred             HHHHHHHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecC-------CcEEEeecC
Q psy9184         406 VFSLAVAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVG-------EKICYYDLS  478 (562)
Q Consensus       406 l~aL~yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~-------~g~v~~~l~  478 (562)
                      +.||+|||+ .+|+||||||+|||++.++                    .+||+|||+++....       ....++..|
T Consensus       153 l~aL~~lH~-~~IiHrDLKP~NILl~~~~--------------------~vkL~DFGls~~~~~~~~~~~~~~~~Gt~~Y  211 (496)
T PTZ00283        153 LLAVHHVHS-KHMIHRDIKSANILLCSNG--------------------LVKLGDFGFSKMYAATVSDDVGRTFCGTPYY  211 (496)
T ss_pred             HHHHHHHHh-CCEecCCCCHHHEEEeCCC--------------------CEEEEecccCeeccccccccccccccCCcce
Confidence            999999999 7999999999999999876                    799999999987543       123457789


Q ss_pred             CCccccCCC-CCcHHHHHHHhhcccCCCCCCCCCC
Q psy9184         479 QDEELFEGE-GDYQFDMYRMMRKQCQNNWQNFTPK  512 (562)
Q Consensus       479 ~~pelF~g~-~~~q~dIy~lm~~~~~~~W~~~~P~  512 (562)
                      ++||++.+. .+.+.|||++.-. +...+.+..|+
T Consensus       212 ~aPE~~~~~~~s~k~DVwSlGvi-lyeLltG~~Pf  245 (496)
T PTZ00283        212 VAPEIWRRKPYSKKADMFSLGVL-LYELLTLKRPF  245 (496)
T ss_pred             eCHHHhCCCCCCcHHHHHHHHHH-HHHHHHCCCCC
Confidence            999998874 5667999986433 32333444444

>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit

Probab=99.92  E-value=5.3e-25  Score=233.93  Aligned_cols=175  Identities=18%  Similarity=0.205  Sum_probs=138.7

Q ss_pred             CCCCCCceeeeeeccCceEEEEE-----------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCC
Q psy9184         258 YPSSALKNCKKIGEGVYGEVFKL-----------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTEN  326 (562)
Q Consensus       258 ~~~~~y~~~~~LG~GsfG~Vyka-----------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n  326 (562)
                      ++.++|++.++||+|+||.||+|           ..||+|+++...       .....+.+.+|+.+++.+.+       
T Consensus        32 ~~~~~~~~~~~LG~G~fG~V~~~~~~~~~~~~~~~~vavK~l~~~~-------~~~~~~~~~~Ei~il~~l~~-------   97 (375)
T cd05104          32 FPRNRLSFGKTLGAGAFGKVVEATAYGLFKSDAAMTVAVKMLKPSA-------HLTEREALMSELKVLSYLGN-------   97 (375)
T ss_pred             cchHHeehhheecCCccceEEEEEEeccccCccceeEEEEeccCCc-------CcHHHHHHHHHHHHHHHhcC-------
Confidence            34568999999999999999988           379999987542       12334678899999999943       


Q ss_pred             CCCcccccccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc---------------
Q psy9184         327 STPCFTELLKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK---------------  391 (562)
Q Consensus       327 ~~p~fv~l~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~---------------  391 (562)
                                        ||||+++++++..             .+..|+|||||+||++.+.+.               
T Consensus        98 ------------------HpnIv~l~~~~~~-------------~~~~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~  146 (375)
T cd05104          98 ------------------HINIVNLLGACTV-------------GGPTLVITEYCCYGDLLNFLRRKRDSFICPKHEDHA  146 (375)
T ss_pred             ------------------Ccceeeeeeeecc-------------CCcceeeehhccCCcHHHHHHhcccccccccccchh
Confidence                              3999999998875             557899999999998865542               


Q ss_pred             ---------------------------------------------------------------cCCHHHHHHHHHHHHHH
Q psy9184         392 ---------------------------------------------------------------YRSPNQTYAMILQVVFS  408 (562)
Q Consensus       392 ---------------------------------------------------------------~l~e~~i~~I~~QIl~a  408 (562)
                                                                                     .+++..+..++.||+.|
T Consensus       147 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~~  226 (375)
T cd05104         147 EAALYKNLLHQREMSCDSLNEYMDMKPGVSYVVPTKADKRRSVRSGSYIDQDVTSEILEEDELALDTEDLLSFSYQVAKG  226 (375)
T ss_pred             hhHHHHhhhhhhcccchhhhhhhhcCCCcccccccccccccccccceecccccHHHHHhccCCCCCHHHHHHHHHHHHHH
Confidence                                                                           25678889999999999


Q ss_pred             HHHHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecCCc-------EEEeecCCCc
Q psy9184         409 LAVAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVGEK-------ICYYDLSQDE  481 (562)
Q Consensus       409 L~yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~~g-------~v~~~l~~~p  481 (562)
                      |.|||+ .+|+||||||+|||++.++                    .+||+|||+++......       ......|++|
T Consensus       227 l~~lH~-~~ivH~Dlkp~Nill~~~~--------------------~~kl~DfG~a~~~~~~~~~~~~~~~~~~~~y~aP  285 (375)
T cd05104         227 MSFLAS-KNCIHRDLAARNILLTHGR--------------------ITKICDFGLARDIRNDSNYVVKGNARLPVKWMAP  285 (375)
T ss_pred             HHHHHH-CCeeccCCchhhEEEECCC--------------------cEEEecCccceeccCcccccccCCCCCCcceeCh
Confidence            999999 7999999999999998765                    79999999998765321       1123358899


Q ss_pred             cccCC-CCCcHHHHHHHh
Q psy9184         482 ELFEG-EGDYQFDMYRMM  498 (562)
Q Consensus       482 elF~g-~~~~q~dIy~lm  498 (562)
                      |.+.+ ..+...|||++.
T Consensus       286 E~~~~~~~~~~sDi~slG  303 (375)
T cd05104         286 ESIFNCVYTFESDVWSYG  303 (375)
T ss_pred             hHhcCCCCCCCCCHHHHH
Confidence            98765 445568888753

Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce

>KOG0608|consensus

Probab=99.92  E-value=7.9e-26  Score=242.56  Aligned_cols=174  Identities=18%  Similarity=0.293  Sum_probs=149.0

Q ss_pred             CCCCCCceeeeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCcc
Q psy9184         258 YPSSALKNCKKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCF  331 (562)
Q Consensus       258 ~~~~~y~~~~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~f  331 (562)
                      +..+.|..++.||-|+||+|.++      ..||+|.+.+..     .........+..|-.||.+.+.            
T Consensus       626 MdKSmFvkik~iGvGAFGeV~Lv~KvDT~~lYAmKTLrKaD-----Vl~rnQvaHVKAERDILAEADn------------  688 (1034)
T KOG0608|consen  626 MDKSMFVKIKTIGVGAFGEVCLVRKVDTRALYAMKTLRKAD-----VLMRNQVAHVKAERDILAEADN------------  688 (1034)
T ss_pred             ccccceEEEeeecccccceeEEEeecchhhHHHHhhhHHHH-----HHhhhhhhhhhhhhhhHhhcCC------------
Confidence            44567889999999999999999      789999998764     3445556778889999999998            


Q ss_pred             cccccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCcccccc---CCHHHHHHHHHHHHHH
Q psy9184         332 TELLKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIKY---RSPNQTYAMILQVVFS  408 (562)
Q Consensus       332 v~l~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~~---l~e~~i~~I~~QIl~a  408 (562)
                                    +.||+||..|++             .+.+|+||+|++||+++..+.+   |.|..++.++..|..|
T Consensus       689 --------------~WVVrLyySFQD-------------kdnLYFVMdYIPGGDmMSLLIrmgIFeE~LARFYIAEltcA  741 (1034)
T KOG0608|consen  689 --------------EWVVRLYYSFQD-------------KDNLYFVMDYIPGGDMMSLLIRMGIFEEDLARFYIAELTCA  741 (1034)
T ss_pred             --------------cceEEEEEEecc-------------CCceEEEEeccCCccHHHHHHHhccCHHHHHHHHHHHHHHH
Confidence                          999999999997             5699999999999998887754   8999999999999999


Q ss_pred             HHHHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeec---C----------------
Q psy9184         409 LAVAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFV---G----------------  469 (562)
Q Consensus       409 L~yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~---~----------------  469 (562)
                      +++.|. +|||||||||+||||+.+|                    ++||+||||+.-+.   +                
T Consensus       742 iesVHk-mGFIHRDiKPDNILIDrdG--------------------HIKLTDFGLCTGfRWTHdskYYq~gdH~RqDSme  800 (1034)
T KOG0608|consen  742 IESVHK-MGFIHRDIKPDNILIDRDG--------------------HIKLTDFGLCTGFRWTHDSKYYQEGDHHRQDSME  800 (1034)
T ss_pred             HHHHHh-ccceecccCccceEEccCC--------------------ceeeeeccccccceeccccccccCCCccccccCC
Confidence            999999 9999999999999999998                    89999999985322   1                


Q ss_pred             ----------------------------CcEEEeecCCCccccCCCCCcH-HHHHH
Q psy9184         470 ----------------------------EKICYYDLSQDEELFEGEGDYQ-FDMYR  496 (562)
Q Consensus       470 ----------------------------~g~v~~~l~~~pelF~g~~~~q-~dIy~  496 (562)
                                                  ...+++.-|++||++..++..| +|.|.
T Consensus       801 p~~e~~d~~~~lkvL~~ra~~~h~r~~ahslvgt~nyiapevl~r~g~~q~cdwws  856 (1034)
T KOG0608|consen  801 PSPEWADISKCLKVLERRAMRQHQRILAHSLVGTPNYIAPEVLARTGYTQLCDWWS  856 (1034)
T ss_pred             CchhhccccccchHHHHHHHhhhhhhhhhhhcCCCcccChHHhcccCccccchhhH
Confidence                                        2356688899999998887767 55544

>KOG0577|consensus

Probab=99.92  E-value=4.4e-26  Score=243.05  Aligned_cols=177  Identities=19%  Similarity=0.273  Sum_probs=149.7

Q ss_pred             CCCCCceeeeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCccc
Q psy9184         259 PSSALKNCKKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFT  332 (562)
Q Consensus       259 ~~~~y~~~~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv  332 (562)
                      |...|..++.||.|+||.||-|      +.||||.+.-++     ......+++++.|+..|+.|.|             
T Consensus        24 PEklf~dLrEIGHGSFGAVYfArd~~n~evVAIKKMsySG-----KQs~EKWqDIlKEVrFL~~l~H-------------   85 (948)
T KOG0577|consen   24 PEKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSG-----KQSNEKWQDILKEVRFLRQLRH-------------   85 (948)
T ss_pred             HHHHHHHHHHhcCCccceeEEeeccCccceeeeeeccccc-----cccHHHHHHHHHHHHHHHhccC-------------
Confidence            4455778899999999999999      899999998876     4556778999999999999999             


Q ss_pred             ccccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCcccc----ccCCHHHHHHHHHHHHHH
Q psy9184         333 ELLKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDI----KYRSPNQTYAMILQVVFS  408 (562)
Q Consensus       333 ~l~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l----~~l~e~~i~~I~~QIl~a  408 (562)
                                   ||+|.+-++|..             +...|||||||-| +..+.+    +.+.+.++..|..+.+.|
T Consensus        86 -------------PntieYkgCyLr-------------e~TaWLVMEYClG-SAsDlleVhkKplqEvEIAAi~~gaL~g  138 (948)
T KOG0577|consen   86 -------------PNTIEYKGCYLR-------------EHTAWLVMEYCLG-SASDLLEVHKKPLQEVEIAAITHGALQG  138 (948)
T ss_pred             -------------CCcccccceeec-------------cchHHHHHHHHhc-cHHHHHHHHhccchHHHHHHHHHHHHHH
Confidence                         888888877765             5688999999974 344433    248899999999999999


Q ss_pred             HHHHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecC-CcEEEeecCCCccccCC-
Q psy9184         409 LAVAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVG-EKICYYDLSQDEELFEG-  486 (562)
Q Consensus       409 L~yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~-~g~v~~~l~~~pelF~g-  486 (562)
                      |+|||+ ++.||||||..|||+...|                    .|||+|||.|....+ ...+++++||+||+.-+ 
T Consensus       139 LaYLHS-~~~IHRDiKAGNILLse~g--------------------~VKLaDFGSAsi~~PAnsFvGTPywMAPEVILAM  197 (948)
T KOG0577|consen  139 LAYLHS-HNRIHRDIKAGNILLSEPG--------------------LVKLADFGSASIMAPANSFVGTPYWMAPEVILAM  197 (948)
T ss_pred             HHHHHH-hhHHhhhccccceEecCCC--------------------eeeeccccchhhcCchhcccCCccccchhHheec
Confidence            999999 8999999999999999998                    799999999988766 56788999999998654 


Q ss_pred             ---CCCcHHHHHHHhhcc
Q psy9184         487 ---EGDYQFDMYRMMRKQ  501 (562)
Q Consensus       487 ---~~~~q~dIy~lm~~~  501 (562)
                         .++-..|||++.-+-
T Consensus       198 DEGqYdgkvDvWSLGITC  215 (948)
T KOG0577|consen  198 DEGQYDGKVDVWSLGITC  215 (948)
T ss_pred             cccccCCccceeeccchh
Confidence               455559998875443

>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6

Probab=99.92  E-value=8.7e-25  Score=221.69  Aligned_cols=191  Identities=18%  Similarity=0.244  Sum_probs=141.0

Q ss_pred             CCceeeeeeccCceEEEEE-------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCccccc
Q psy9184         262 ALKNCKKIGEGVYGEVFKL-------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTEL  334 (562)
Q Consensus       262 ~y~~~~~LG~GsfG~Vyka-------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~l  334 (562)
                      +|++.+.||+|+||.||+|       ..||+|++.....      .......+.+|+.+++.+..+.             
T Consensus         2 ~Y~~~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~------~~~~~~~~~~e~~~l~~l~~~~-------------   62 (290)
T cd07862           2 QYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTG------EEGMPLSTIREVAVLRHLETFE-------------   62 (290)
T ss_pred             CcceeeEeccCCCeEEEEEEEcCCCCeEEEEEEEecccC------CCCchHHHHHHHHHHHhhcccC-------------
Confidence            5889999999999999999       5699999886531      1112234567888887765211             


Q ss_pred             ccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc-----cCCHHHHHHHHHHHHHHH
Q psy9184         335 LKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK-----YRSPNQTYAMILQVVFSL  409 (562)
Q Consensus       335 ~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~-----~l~e~~i~~I~~QIl~aL  409 (562)
                                ||||+++++++....        ......+++||||+. |++...+.     .+++..++.++.||+.||
T Consensus        63 ----------hpniv~~~~~~~~~~--------~~~~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL  123 (290)
T cd07862          63 ----------HPNVVRLFDVCTVSR--------TDRETKLTLVFEHVD-QDLTTYLDKVPEPGVPTETIKDMMFQLLRGL  123 (290)
T ss_pred             ----------CCCcceEEEEEeccc--------CCCCCcEEEEEccCC-CCHHHHHHhCCCCCCCHHHHHHHHHHHHHHH
Confidence                      399999988875311        012457899999997 45554442     278999999999999999


Q ss_pred             HHHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecC----CcEEEeecCCCccccC
Q psy9184         410 AVAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVG----EKICYYDLSQDEELFE  485 (562)
Q Consensus       410 ~yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~----~g~v~~~l~~~pelF~  485 (562)
                      .|||+ .||+||||||+|||++.++                    .+||+|||+++....    ....++..|++||.+.
T Consensus       124 ~~lH~-~~iiH~dlkp~Nil~~~~~--------------------~~kl~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~  182 (290)
T cd07862         124 DFLHS-HRVVHRDLKPQNILVTSSG--------------------QIKLADFGLARIYSFQMALTSVVVTLWYRAPEVLL  182 (290)
T ss_pred             HHHHH-CCeeeCCCCHHHEEEcCCC--------------------CEEEccccceEeccCCcccccccccccccChHHHh
Confidence            99999 7999999999999998886                    799999999987643    2345677899999886


Q ss_pred             C-CCCcHHHHHHHhhcccCCCCCCCCCC
Q psy9184         486 G-EGDYQFDMYRMMRKQCQNNWQNFTPK  512 (562)
Q Consensus       486 g-~~~~q~dIy~lm~~~~~~~W~~~~P~  512 (562)
                      + ......|||++.-.. ...+.+..|+
T Consensus       183 ~~~~~~~~DiwslG~il-~el~~g~~~f  209 (290)
T cd07862         183 QSSYATPVDLWSVGCIF-AEMFRRKPLF  209 (290)
T ss_pred             CCCCCCccchHHHHHHH-HHHHcCCCCc
Confidence            5 445568998864333 2334444444

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla

>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor

Probab=99.92  E-value=7.4e-25  Score=232.84  Aligned_cols=174  Identities=17%  Similarity=0.215  Sum_probs=138.6

Q ss_pred             CCCCCCceeeeeeccCceEEEEE-----------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhc-CCccccCC
Q psy9184         258 YPSSALKNCKKIGEGVYGEVFKL-----------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKET-SDLQYRTE  325 (562)
Q Consensus       258 ~~~~~y~~~~~LG~GsfG~Vyka-----------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L-~h~~~~~~  325 (562)
                      ++.++|++.+.||+|+||.||+|           ..||+|++....       .......+.+|+.+++.+ .|      
T Consensus        35 ~~~~~~~~~~~LG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~-------~~~~~~~~~~E~~il~~l~~h------  101 (374)
T cd05106          35 FPRDNLQFGKTLGAGAFGKVVEATAFGLGKEDNVLRVAVKMLKASA-------HTDEREALMSELKILSHLGQH------  101 (374)
T ss_pred             ccHHHceehheecCCCcccEEEEEEecCCcccccceeEEEeccCCC-------CHHHHHHHHHHHHHHHhhccC------
Confidence            34578999999999999999987           379999998643       123346788999999999 56      


Q ss_pred             CCCCcccccccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc--------------
Q psy9184         326 NSTPCFTELLKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK--------------  391 (562)
Q Consensus       326 n~~p~fv~l~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~--------------  391 (562)
                                          |||+++++.+..             .+.+|+|||||.+|++.+.+.              
T Consensus       102 --------------------~nIv~~~~~~~~-------------~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~  148 (374)
T cd05106         102 --------------------KNIVNLLGACTH-------------GGPVLVITEYCCYGDLLNFLRKKAETFLNFVMALP  148 (374)
T ss_pred             --------------------CceeeEeeEecC-------------CCCeEEeHhhccCCcHHHHHHhhhhhhcccccccc
Confidence                                999999998875             458999999999998765431              


Q ss_pred             -----------------------------------------------------------cCCHHHHHHHHHHHHHHHHHH
Q psy9184         392 -----------------------------------------------------------YRSPNQTYAMILQVVFSLAVA  412 (562)
Q Consensus       392 -----------------------------------------------------------~l~e~~i~~I~~QIl~aL~yL  412 (562)
                                                                                 .+++.+++.++.||+.||.||
T Consensus       149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~yL  228 (374)
T cd05106         149 EISETSSDYKNITLEKKYIRSDSGFSSQGSDTYVEMRPVSSSSSQSSDSKDEEDTEDSWPLDLDDLLRFSSQVAQGMDFL  228 (374)
T ss_pred             ccccccccccccchhcccccccccccccccccccccCCccccccccccccchhccCCCCCcCHHHHHHHHHHHHHHHHHH
Confidence                                                                       256788999999999999999


Q ss_pred             HhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecCCc-------EEEeecCCCccccC
Q psy9184         413 EVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVGEK-------ICYYDLSQDEELFE  485 (562)
Q Consensus       413 H~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~~g-------~v~~~l~~~pelF~  485 (562)
                      |+ .||+||||||+|||++.++                    .++|+|||+++......       ...+..|++||.+.
T Consensus       229 H~-~giiHrDLkp~Nil~~~~~--------------------~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~  287 (374)
T cd05106         229 AS-KNCIHRDVAARNVLLTDGR--------------------VAKICDFGLARDIMNDSNYVVKGNARLPVKWMAPESIF  287 (374)
T ss_pred             HH-CCEEeccCchheEEEeCCC--------------------eEEEeeceeeeeccCCcceeeccCCCCccceeCHHHhc
Confidence            99 7999999999999998775                    79999999998754321       11223588999765


Q ss_pred             C-CCCcHHHHHHHh
Q psy9184         486 G-EGDYQFDMYRMM  498 (562)
Q Consensus       486 g-~~~~q~dIy~lm  498 (562)
                      + ..+...|||++.
T Consensus       288 ~~~~~~~~DvwSlG  301 (374)
T cd05106         288 DCVYTVQSDVWSYG  301 (374)
T ss_pred             CCCCCccccHHHHH
Confidence            4 456668888753

Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti

>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1

Probab=99.92  E-value=1.5e-24  Score=228.63  Aligned_cols=179  Identities=21%  Similarity=0.273  Sum_probs=141.7

Q ss_pred             CCCceeeeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCccccc
Q psy9184         261 SALKNCKKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTEL  334 (562)
Q Consensus       261 ~~y~~~~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~l  334 (562)
                      .+|++.+.||+|+||.||+|      +.||||++....      ........+.+|+.+++.++|               
T Consensus        24 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~------~~~~~~~~~~~E~~~l~~l~h---------------   82 (364)
T cd07875          24 KRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPF------QNQTHAKRAYRELVLMKCVNH---------------   82 (364)
T ss_pred             cceeEEEEeecCCCeEEEEEEECCCCcEEEEEEeCccc------cCchhHHHHHHHHHHHHhcCC---------------
Confidence            67999999999999999999      789999987542      123334567899999999998               


Q ss_pred             ccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc-cCCHHHHHHHHHHHHHHHHHHH
Q psy9184         335 LKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK-YRSPNQTYAMILQVVFSLAVAE  413 (562)
Q Consensus       335 ~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~-~l~e~~i~~I~~QIl~aL~yLH  413 (562)
                                 |||+++++.|....       .......+|+||||+.++ +...+. .+++..+..++.|++.||.|||
T Consensus        83 -----------~~ii~~~~~~~~~~-------~~~~~~~~~lv~e~~~~~-l~~~~~~~~~~~~~~~~~~qi~~aL~~LH  143 (364)
T cd07875          83 -----------KNIIGLLNVFTPQK-------SLEEFQDVYIVMELMDAN-LCQVIQMELDHERMSYLLYQMLCGIKHLH  143 (364)
T ss_pred             -----------CCccccceeecccc-------cccccCeEEEEEeCCCCC-HHHHHHhcCCHHHHHHHHHHHHHHHHHHh
Confidence                       89998888775421       011234689999999754 544443 4789999999999999999999


Q ss_pred             hhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecC----CcEEEeecCCCccccCCC-C
Q psy9184         414 VELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVG----EKICYYDLSQDEELFEGE-G  488 (562)
Q Consensus       414 ~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~----~g~v~~~l~~~pelF~g~-~  488 (562)
                      + .||+||||||+|||++.++                    .+||+|||+|+....    ...+.+..|++||++.+. .
T Consensus       144 ~-~~ivH~Dlkp~NIll~~~~--------------------~~kL~DfG~a~~~~~~~~~~~~~~t~~y~aPE~~~~~~~  202 (364)
T cd07875         144 S-AGIIHRDLKPSNIVVKSDC--------------------TLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGY  202 (364)
T ss_pred             h-CCeecCCCCHHHEEECCCC--------------------cEEEEeCCCccccCCCCcccCCcccCCcCCHHHHhCCCC
Confidence            9 7999999999999999876                    799999999987643    233557789999988774 4


Q ss_pred             CcHHHHHHHhhc
Q psy9184         489 DYQFDMYRMMRK  500 (562)
Q Consensus       489 ~~q~dIy~lm~~  500 (562)
                      +...|||++.-.
T Consensus       203 ~~~~DiwSlG~i  214 (364)
T cd07875         203 KENVDIWSVGCI  214 (364)
T ss_pred             CchhhHHhHHHH
Confidence            566999986433

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3

Probab=99.92  E-value=4.3e-24  Score=212.29  Aligned_cols=226  Identities=15%  Similarity=0.232  Sum_probs=173.4

Q ss_pred             CCceeeeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCcccccc
Q psy9184         262 ALKNCKKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTELL  335 (562)
Q Consensus       262 ~y~~~~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~l~  335 (562)
                      +|++.++||+|+||.||++      ..+|+|.++...       .....+.+.+|+.+++.++|                
T Consensus         1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~-------~~~~~~~~~~e~~~l~~l~h----------------   57 (255)
T cd08219           1 QYNVLRVVGEGSFGRALLVQHVNSDQKYAMKEIRLPK-------SSSAVEDSRKEAVLLAKMKH----------------   57 (255)
T ss_pred             CceEEEEeeccCCeEEEEEEEcCCCceEEEEEEEcCc-------chHHHHHHHHHHHHHHhCCC----------------
Confidence            4788999999999999999      789999987542       12344677889999999998                


Q ss_pred             cccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc-----cCCHHHHHHHHHHHHHHHH
Q psy9184         336 KCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK-----YRSPNQTYAMILQVVFSLA  410 (562)
Q Consensus       336 ~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~-----~l~e~~i~~I~~QIl~aL~  410 (562)
                                |||+++++.|..             ++.+|++|||+++|++.+.+.     .+++..+..++.||+.||.
T Consensus        58 ----------~~i~~~~~~~~~-------------~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~al~  114 (255)
T cd08219          58 ----------PNIVAFKESFEA-------------DGHLYIVMEYCDGGDLMQKIKLQRGKLFPEDTILQWFVQMCLGVQ  114 (255)
T ss_pred             ----------CCcceEEEEEEE-------------CCEEEEEEeeCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHH
Confidence                      999999998875             568999999999998876553     3789999999999999999


Q ss_pred             HHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecCCc-----EEEeecCCCccccC
Q psy9184         411 VAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVGEK-----ICYYDLSQDEELFE  485 (562)
Q Consensus       411 yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~~g-----~v~~~l~~~pelF~  485 (562)
                      |||+ .||+|+||||+|||++.++                    .++|+|||+++.....+     ...+..|++||++.
T Consensus       115 ~lH~-~~i~H~dl~p~nili~~~~--------------------~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~aPE~~~  173 (255)
T cd08219         115 HIHE-KRVLHRDIKSKNIFLTQNG--------------------KVKLGDFGSARLLTSPGAYACTYVGTPYYVPPEIWE  173 (255)
T ss_pred             HHhh-CCcccCCCCcceEEECCCC--------------------cEEEcccCcceeecccccccccccCCccccCHHHHc
Confidence            9999 7999999999999998876                    79999999998765422     33456688999887


Q ss_pred             CC-CCcHHHHHHHhhcccCCCCCCCCCCChhhhHHHHHHHHhhcccCCCCCCCchhHHHHHHHHHHHhcCCCcCcCC
Q psy9184         486 GE-GDYQFDMYRMMRKQCQNNWQNFTPKNNVFWIHYLVDKATCLKKGYQYLRAPRHQAFELLEELGQNALHFDSCYE  561 (562)
Q Consensus       486 g~-~~~q~dIy~lm~~~~~~~W~~~~P~tn~~wl~yl~~~Ll~~~~~~~~~~~~~~~~~~~l~~l~~~~l~~~s~~~  561 (562)
                      +. .+...|+|++ |......|.+..|+....+...+......   .+.....   ..-..+..|.+++|..+...|
T Consensus       174 ~~~~~~~~Dv~sl-G~i~~~l~~g~~p~~~~~~~~~~~~~~~~---~~~~~~~---~~~~~~~~li~~~l~~~P~~R  243 (255)
T cd08219         174 NMPYNNKSDIWSL-GCILYELCTLKHPFQANSWKNLILKVCQG---SYKPLPS---HYSYELRSLIKQMFKRNPRSR  243 (255)
T ss_pred             cCCcCchhhhhhh-chhheehhhccCCCCCCCHHHHHHHHhcC---CCCCCCc---ccCHHHHHHHHHHHhCCcccC
Confidence            74 4556899876 55566778888888665544443332222   1111111   123456778888888877665

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati

>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase

Probab=99.92  E-value=1.3e-24  Score=226.76  Aligned_cols=190  Identities=17%  Similarity=0.229  Sum_probs=145.2

Q ss_pred             CCCceeeeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCccccc
Q psy9184         261 SALKNCKKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTEL  334 (562)
Q Consensus       261 ~~y~~~~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~l  334 (562)
                      ++|++.+.||.|+||.||+|      ..||+|++....      ........+.+|+.+++.++|               
T Consensus        15 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~------~~~~~~~~~~~E~~~l~~l~h---------------   73 (343)
T cd07878          15 ERYQNLTPVGSGAYGSVCSAYDTRLRQKVAVKKLSRPF------QSLIHARRTYRELRLLKHMKH---------------   73 (343)
T ss_pred             hhhhhheecccCCCeEEEEEEECCCCCEEEEEEeCchh------hhhHHHHHHHHHHHHHHhcCC---------------
Confidence            67999999999999999999      789999987542      112334567789999999998               


Q ss_pred             ccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc--cCCHHHHHHHHHHHHHHHHHH
Q psy9184         335 LKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK--YRSPNQTYAMILQVVFSLAVA  412 (562)
Q Consensus       335 ~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~--~l~e~~i~~I~~QIl~aL~yL  412 (562)
                                 |||++++++|....       ........|++||++ ++++...+.  .+++.++..++.||+.||.||
T Consensus        74 -----------~~iv~~~~~~~~~~-------~~~~~~~~~~~~~~~-~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~L  134 (343)
T cd07878          74 -----------ENVIGLLDVFTPAT-------SIENFNEVYLVTNLM-GADLNNIVKCQKLSDEHVQFLIYQLLRGLKYI  134 (343)
T ss_pred             -----------Cchhhhhhhhcccc-------cccccCcEEEEeecC-CCCHHHHHhcCCCCHHHHHHHHHHHHHHHHHH
Confidence                       99999999886421       111234689999998 454433332  489999999999999999999


Q ss_pred             HhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecC--CcEEEeecCCCccccCCC--C
Q psy9184         413 EVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVG--EKICYYDLSQDEELFEGE--G  488 (562)
Q Consensus       413 H~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~--~g~v~~~l~~~pelF~g~--~  488 (562)
                      |+ .||+||||||+|||++.++                    .+||+|||+++....  .+.+.+..|++||++.+.  .
T Consensus       135 H~-~~ivHrdikp~Nil~~~~~--------------------~~kl~Dfg~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~  193 (343)
T cd07878         135 HS-AGIIHRDLKPSNVAVNEDC--------------------ELRILDFGLARQADDEMTGYVATRWYRAPEIMLNWMHY  193 (343)
T ss_pred             HH-CCeecccCChhhEEECCCC--------------------CEEEcCCccceecCCCcCCccccccccCchHhcCCccC
Confidence            99 7999999999999999886                    799999999987654  334567789999998763  4


Q ss_pred             CcHHHHHHHhhcccCCCCCCCCCC
Q psy9184         489 DYQFDMYRMMRKQCQNNWQNFTPK  512 (562)
Q Consensus       489 ~~q~dIy~lm~~~~~~~W~~~~P~  512 (562)
                      ....|||++.-. ....+.+..|+
T Consensus       194 ~~~~DiwslG~i-l~el~~g~~pf  216 (343)
T cd07878         194 NQTVDIWSVGCI-MAELLKGKALF  216 (343)
T ss_pred             CchhhhHhHHHH-HHHHHHCCCCC
Confidence            456899885433 22333444444

Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is

>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity

Probab=99.92  E-value=3.7e-25  Score=219.38  Aligned_cols=230  Identities=18%  Similarity=0.217  Sum_probs=166.8

Q ss_pred             CceeeeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCccccccc
Q psy9184         263 LKNCKKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTELLK  336 (562)
Q Consensus       263 y~~~~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~l~~  336 (562)
                      |++.+.||+|+||.||+|      +.||+|++....      ..........+|+.+++.++|                 
T Consensus         1 y~~~~~lg~G~~g~v~~~~~~~~~~~~~~K~~~~~~------~~~~~~~~~~~e~~~~~~l~~-----------------   57 (260)
T PF00069_consen    1 YRLVKKLGSGGFGTVYKAKNKKNGQKVAVKIIDKSE------IEEEEREENIREIKILRRLRH-----------------   57 (260)
T ss_dssp             EEEEEEEEEESSEEEEEEEETTTTEEEEEEEEESTT------HHHHHHHHHHHHHHHHHHHTB-----------------
T ss_pred             CEEeEEEEeCCCEEEEEEEECCCCeEEEEEEecccc------ccccccchhhhhhhccccccc-----------------
Confidence            678999999999999999      689999999864      223333344669999999987                 


Q ss_pred             ccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc---cCCHHHHHHHHHHHHHHHHHHH
Q psy9184         337 CSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK---YRSPNQTYAMILQVVFSLAVAE  413 (562)
Q Consensus       337 ~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~---~l~e~~i~~I~~QIl~aL~yLH  413 (562)
                               |||+++++++..             ....++|||++.+|++.+.+.   .+++.++..++.||+.||.+||
T Consensus        58 ---------~~i~~~~~~~~~-------------~~~~~~v~~~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~L~~Lh  115 (260)
T PF00069_consen   58 ---------PNIVQILDVFQD-------------DNYLYIVMEYCPGGSLQDYLQKNKPLSEEEILKIAYQILEALAYLH  115 (260)
T ss_dssp             ---------TTBCHEEEEEEE-------------SSEEEEEEEEETTEBHHHHHHHHSSBBHHHHHHHHHHHHHHHHHHH
T ss_pred             ---------cccccccccccc-------------cccccccccccccccccccccccccccccccccccccccccccccc
Confidence                     999999999876             558999999999887765553   4899999999999999999999


Q ss_pred             hhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecC-----CcEEEeecCCCccccC--C
Q psy9184         414 VELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVG-----EKICYYDLSQDEELFE--G  486 (562)
Q Consensus       414 ~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~-----~g~v~~~l~~~pelF~--g  486 (562)
                      + .+|+||||||+|||++.++                    .++|+|||++.....     .....+..|.+||++.  .
T Consensus       116 ~-~~i~H~dikp~NIl~~~~~--------------------~~~l~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~  174 (260)
T PF00069_consen  116 S-KGIVHRDIKPENILLDENG--------------------EVKLIDFGSSVKLSENNENFNPFVGTPEYMAPEVLQQGK  174 (260)
T ss_dssp             H-TTEEESSBSGGGEEESTTS--------------------EEEESSGTTTEESTSTTSEBSSSSSSGGGSCHHHHTTTS
T ss_pred             c-ccccccccccccccccccc--------------------ccccccccccccccccccccccccccccccccccccccc
Confidence            9 7999999999999999776                    799999999986321     2334467789999987  3


Q ss_pred             CCCcHHHHHHHhhcccCCCCCCCCCCChh---hhHHHHHHHHhhcccCCCCCCCchhHHHHHHHHHHHhcCCCcCcCCC
Q psy9184         487 EGDYQFDMYRMMRKQCQNNWQNFTPKNNV---FWIHYLVDKATCLKKGYQYLRAPRHQAFELLEELGQNALHFDSCYEM  562 (562)
Q Consensus       487 ~~~~q~dIy~lm~~~~~~~W~~~~P~tn~---~wl~yl~~~Ll~~~~~~~~~~~~~~~~~~~l~~l~~~~l~~~s~~~~  562 (562)
                      ......|+|++..... ..+.+..|+.+.   --...+...+..   ...............+.++...||+.+...|+
T Consensus       175 ~~~~~~Di~slG~il~-~l~~~~~p~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~l~~li~~~l~~~p~~R~  249 (260)
T PF00069_consen  175 KYTRKSDIWSLGIILY-ELLTGKLPFEESNSDDQLEIIEKILKR---PLPSSSQQSREKSEELRDLIKKMLSKDPEQRP  249 (260)
T ss_dssp             SBSTHHHHHHHHHHHH-HHHHSSSSSTTSSHHHHHHHHHHHHHT---HHHHHTTSHTTSHHHHHHHHHHHSSSSGGGST
T ss_pred             cccccccccccccccc-cccccccccccccchhhhhhhhhcccc---cccccccccchhHHHHHHHHHHHccCChhHCc
Confidence            5666799987655433 333344444332   112222222221   00000100001126888899999998887663

Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....

>KOG0579|consensus

Probab=99.92  E-value=1.2e-25  Score=240.70  Aligned_cols=177  Identities=20%  Similarity=0.314  Sum_probs=150.7

Q ss_pred             cCCCCCCceeeeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCc
Q psy9184         257 RYPSSALKNCKKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPC  330 (562)
Q Consensus       257 ~~~~~~y~~~~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~  330 (562)
                      .-|.+.+.++..||.|+||.||+|      -..|.|+|....        ...+++++-||.||..++|           
T Consensus        28 lnP~d~WeIiGELGDGAFGKVyKA~nket~~lAAaKvIetks--------eEELEDylVEIeILa~CdH-----------   88 (1187)
T KOG0579|consen   28 LNPRDHWEIIGELGDGAFGKVYKAVNKETKLLAAAKVIETKS--------EEELEDYLVEIEILAECDH-----------   88 (1187)
T ss_pred             CCHHHHHHHHhhhcCccchhhhhhhcccchhhhhhhhhcccc--------hhHHhhhhhhhhhhhcCCC-----------
Confidence            345567889999999999999999      456778887653        4567899999999999999           


Q ss_pred             ccccccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc-----cCCHHHHHHHHHHH
Q psy9184         331 FTELLKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK-----YRSPNQTYAMILQV  405 (562)
Q Consensus       331 fv~l~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~-----~l~e~~i~~I~~QI  405 (562)
                                     |+||++++.|..             ++.+||.+|||.|| ..+.+.     .+.+.++..+++|+
T Consensus        89 ---------------P~ivkLl~ayy~-------------enkLwiliEFC~GG-AVDaimlEL~r~LtE~QIqvvc~q~  139 (1187)
T KOG0579|consen   89 ---------------PVIVKLLSAYYF-------------ENKLWILIEFCGGG-AVDAIMLELGRVLTEDQIQVVCYQV  139 (1187)
T ss_pred             ---------------hHHHHHHHHHhc-------------cCceEEEEeecCCc-hHhHHHHHhccccchHHHHHHHHHH
Confidence                           999999998864             77999999999988 445443     38999999999999


Q ss_pred             HHHHHHHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecC-----CcEEEeecCCC
Q psy9184         406 VFSLAVAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVG-----EKICYYDLSQD  480 (562)
Q Consensus       406 l~aL~yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~-----~g~v~~~l~~~  480 (562)
                      +.||.|||+ .+|||||||.+|||++.+|                    .++|+|||.|.....     +..+++++||+
T Consensus       140 ldALn~LHs-~~iIHRDLKAGNiL~TldG--------------------dirLADFGVSAKn~~t~qkRDsFIGTPYWMA  198 (1187)
T KOG0579|consen  140 LDALNWLHS-QNIIHRDLKAGNILLTLDG--------------------DIRLADFGVSAKNKSTRQKRDSFIGTPYWMA  198 (1187)
T ss_pred             HHHHHHHhh-cchhhhhccccceEEEecC--------------------cEeeecccccccchhHHhhhccccCCccccc
Confidence            999999999 6999999999999999998                    699999998866543     67889999999


Q ss_pred             ccccCC------CCCcHHHHHHHhhccc
Q psy9184         481 EELFEG------EGDYQFDMYRMMRKQC  502 (562)
Q Consensus       481 pelF~g------~~~~q~dIy~lm~~~~  502 (562)
                      |++..+      .++|.+|||++.-+.+
T Consensus       199 PEVvmCET~KD~PYDykaDiWSlGITLI  226 (1187)
T KOG0579|consen  199 PEVVMCETFKDQPYDYKADIWSLGITLI  226 (1187)
T ss_pred             chheeeccccCCCchhhhhHHhhhhHHH
Confidence            998765      3788899998755554

>KOG4250|consensus

Probab=99.92  E-value=1.3e-25  Score=244.96  Aligned_cols=182  Identities=16%  Similarity=0.206  Sum_probs=147.9

Q ss_pred             CceeeeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCccccccc
Q psy9184         263 LKNCKKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTELLK  336 (562)
Q Consensus       263 y~~~~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~l~~  336 (562)
                      +...+.||+|+||.||+|      +.||||.++...       ..+-.+.+.+|+++|++|+|                 
T Consensus        15 W~~~e~LG~Ga~g~V~rgrnketG~~vAvK~~~~~~-------~~r~~e~~~~EieilkKLnh-----------------   70 (732)
T KOG4250|consen   15 WEMDERLGKGAFGNVYRGRNKETGRLVAVKTFNKES-------SLRPRERWCREIEILKKLNH-----------------   70 (732)
T ss_pred             eeehhhhcCCccceeeeecccccccchhHHhhhhhc-------ccchHHHHHHHHHHHHHcCc-----------------
Confidence            456789999999999999      899999998753       23445778899999999999                 


Q ss_pred             ccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCcccccc------CCHHHHHHHHHHHHHHHH
Q psy9184         337 CSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIKY------RSPNQTYAMILQVVFSLA  410 (562)
Q Consensus       337 ~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~~------l~e~~i~~I~~QIl~aL~  410 (562)
                               ||||+++++-++..      + ........+|||||.||++...+..      +++.+.+.++..++.||.
T Consensus        71 ---------~NIVk~f~iee~~~------~-~~~~~~~vlvmEyC~gGsL~~~L~~PEN~~GLpE~e~l~lL~d~~~al~  134 (732)
T KOG4250|consen   71 ---------PNIVKLFDIEETKF------L-GLVTRLPVLVMEYCSGGSLRKVLNSPENAYGLPESEFLDLLSDLVSALR  134 (732)
T ss_pred             ---------hhhhhhcccCCccc------c-CcccccceEEEeecCCCcHHHHhcCcccccCCCHHHHHHHHHHHHHHHH
Confidence                     99999998765432      1 2234567899999999988777753      999999999999999999


Q ss_pred             HHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecC----CcEEEeecCCCccccC-
Q psy9184         411 VAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVG----EKICYYDLSQDEELFE-  485 (562)
Q Consensus       411 yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~----~g~v~~~l~~~pelF~-  485 (562)
                      |||+ +||+||||||+||++-...+..                ...||+|||.||.+.+    ...++|+-|-+|+++. 
T Consensus       135 ~LrE-n~IvHRDlKP~NIvl~~Gedgq----------------~IyKLtDfG~Arel~d~s~~~S~vGT~~YLhPel~E~  197 (732)
T KOG4250|consen  135 HLRE-NGIVHRDLKPGNIVLQIGEDGQ----------------SIYKLTDFGAARELDDNSLFTSLVGTEEYLHPELYER  197 (732)
T ss_pred             HHHH-cCceeccCCCCcEEEeecCCCc----------------eEEeeecccccccCCCCCeeeeecCchhhcChHHHhh
Confidence            9999 8999999999999998765321                2579999999999887    3456788899999999 


Q ss_pred             -CCCCcHHHHHHHhhcc
Q psy9184         486 -GEGDYQFDMYRMMRKQ  501 (562)
Q Consensus       486 -g~~~~q~dIy~lm~~~  501 (562)
                       +.+..+.|.|+..-+.
T Consensus       198 q~~y~~tVDLWS~Gvtl  214 (732)
T KOG4250|consen  198 QKKYTATVDLWSFGVTL  214 (732)
T ss_pred             ccCcCceeehhhhhhHH
Confidence             4556668887754433

>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha

Probab=99.92  E-value=1.8e-24  Score=232.45  Aligned_cols=174  Identities=19%  Similarity=0.203  Sum_probs=139.1

Q ss_pred             CCCCCceeeeeeccCceEEEEE-----------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCC
Q psy9184         259 PSSALKNCKKIGEGVYGEVFKL-----------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENS  327 (562)
Q Consensus       259 ~~~~y~~~~~LG~GsfG~Vyka-----------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~  327 (562)
                      +.++|.+.++||+|+||.||+|           ..||||++....       .....+.+.+|+.+++.+..        
T Consensus        35 ~~~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~-------~~~~~~~~~~Ei~~l~~l~~--------   99 (400)
T cd05105          35 PRDGLVLGRILGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTA-------RSSEKQALMSELKIMTHLGP--------   99 (400)
T ss_pred             cccceehhheecCCCCceEEEEEEcccCCCCCceEEEEEecCCCC-------ChHHHHHHHHHHHHHHhcCC--------
Confidence            4578999999999999999998           259999997543       12334678999999999973        


Q ss_pred             CCcccccccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc----------------
Q psy9184         328 TPCFTELLKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK----------------  391 (562)
Q Consensus       328 ~p~fv~l~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~----------------  391 (562)
                                       ||||+++++++..             .+.+|||||||++|++.+.+.                
T Consensus       100 -----------------HpnIv~l~~~~~~-------------~~~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~  149 (400)
T cd05105         100 -----------------HLNIVNLLGACTK-------------SGPIYIITEYCFYGDLVNYLHKNRDNFLSRHPEKPKK  149 (400)
T ss_pred             -----------------CCCeeeEEEEEcc-------------CCceEEEEEecCCCcHHHHHHHhhhhhhccccccccc
Confidence                             3999999999875             458999999999998754331                


Q ss_pred             --------------------------------------------------------------------------------
Q psy9184         392 --------------------------------------------------------------------------------  391 (562)
Q Consensus       392 --------------------------------------------------------------------------------  391 (562)
                                                                                                      
T Consensus       150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~  229 (400)
T cd05105         150 DLDIFGINPADESTRSYVILSFENKGDYMDMKQADTTQYVPMLEIKEASKYSDIQRSNYDRPASYKGSNDSEVKNLLSDD  229 (400)
T ss_pred             cccccCCCcccccccchhhhhhcccccccccccccccccchhhhhhhhhhhhhcccCcccccccccCcchhhHHHHHHhc
Confidence                                                                                            


Q ss_pred             ---cCCHHHHHHHHHHHHHHHHHHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeec
Q psy9184         392 ---YRSPNQTYAMILQVVFSLAVAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFV  468 (562)
Q Consensus       392 ---~l~e~~i~~I~~QIl~aL~yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~  468 (562)
                         .+++.++..++.||+.||.|||+ .+|+||||||+|||++.++                    .+||+|||+++...
T Consensus       230 ~~~~l~~~~~~~~~~qi~~aL~~LH~-~~ivH~dikp~Nill~~~~--------------------~~kL~DfGla~~~~  288 (400)
T cd05105         230 GSEGLTTLDLLSFTYQVARGMEFLAS-KNCVHRDLAARNVLLAQGK--------------------IVKICDFGLARDIM  288 (400)
T ss_pred             ccCCCCHHHHHHHHHHHHHHHHHHHh-CCeeCCCCChHhEEEeCCC--------------------EEEEEeCCcceecc
Confidence               25677888999999999999999 7999999999999998875                    79999999998764


Q ss_pred             CC-------cEEEeecCCCccccCC-CCCcHHHHHHHh
Q psy9184         469 GE-------KICYYDLSQDEELFEG-EGDYQFDMYRMM  498 (562)
Q Consensus       469 ~~-------g~v~~~l~~~pelF~g-~~~~q~dIy~lm  498 (562)
                      ..       ....+..|++||.+.+ ..+.+.|||++.
T Consensus       289 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwSlG  326 (400)
T cd05105         289 HDSNYVSKGSTFLPVKWMAPESIFDNLYTTLSDVWSYG  326 (400)
T ss_pred             ccccccccCCcCCCcceEChhhhcCCCCCchhhHHHHH
Confidence            31       1122345889997765 456678998853

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-

>PTZ00284 protein kinase; Provisional

Probab=99.92  E-value=5e-24  Score=232.78  Aligned_cols=206  Identities=21%  Similarity=0.146  Sum_probs=146.0

Q ss_pred             CCCCceeeeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCcccc
Q psy9184         260 SSALKNCKKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTE  333 (562)
Q Consensus       260 ~~~y~~~~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~  333 (562)
                      .++|++.++||+|+||.||+|      +.||||+++...         ........|+.+++.+.|...           
T Consensus       128 ~~~y~i~~~lG~G~fg~V~~a~~~~~~~~vAvK~i~~~~---------~~~~~~~~e~~~l~~l~~~~~-----------  187 (467)
T PTZ00284        128 TQRFKILSLLGEGTFGKVVEAWDRKRKEYCAVKIVRNVP---------KYTRDAKIEIQFMEKVRQADP-----------  187 (467)
T ss_pred             CCcEEEEEEEEeccCEEEEEEEEcCCCeEEEEEEEecch---------hhHHHHHHHHHHHHHHhhcCc-----------
Confidence            478999999999999999999      789999997431         222455678888888877211           


Q ss_pred             cccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc---cCCHHHHHHHHHHHHHHHH
Q psy9184         334 LLKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK---YRSPNQTYAMILQVVFSLA  410 (562)
Q Consensus       334 l~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~---~l~e~~i~~I~~QIl~aL~  410 (562)
                               ..|.+++.++++|..            ....+|+|||++ |+++++.+.   .+++.++..|+.||+.||.
T Consensus       188 ---------~~~~~i~~i~~~~~~------------~~~~~~iv~~~~-g~~l~~~l~~~~~l~~~~~~~i~~qi~~aL~  245 (467)
T PTZ00284        188 ---------ADRFPLMKIQRYFQN------------ETGHMCIVMPKY-GPCLLDWIMKHGPFSHRHLAQIIFQTGVALD  245 (467)
T ss_pred             ---------ccCcceeeeEEEEEc------------CCceEEEEEecc-CCCHHHHHHHcCCCCHHHHHHHHHHHHHHHH
Confidence                     113568888887764            235789999998 566766554   4899999999999999999


Q ss_pred             HHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecC--CcEEEeecCCCccccCC-C
Q psy9184         411 VAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVG--EKICYYDLSQDEELFEG-E  487 (562)
Q Consensus       411 yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~--~g~v~~~l~~~pelF~g-~  487 (562)
                      |||+++|||||||||+|||++..+... ..   ............+||+|||++.....  ...+++..|++||++.+ .
T Consensus       246 yLH~~~gIiHrDlKP~NILl~~~~~~~-~~---~~~~~~~~~~~~vkl~DfG~~~~~~~~~~~~~gt~~Y~APE~~~~~~  321 (467)
T PTZ00284        246 YFHTELHLMHTDLKPENILMETSDTVV-DP---VTNRALPPDPCRVRICDLGGCCDERHSRTAIVSTRHYRSPEVVLGLG  321 (467)
T ss_pred             HHHhcCCeecCCCCHHHEEEecCCccc-cc---ccccccCCCCceEEECCCCccccCccccccccCCccccCcHHhhcCC
Confidence            999746999999999999998765210 00   00001112223699999999865432  33456788999999877 4


Q ss_pred             CCcHHHHHHHhhcccCCCCCCCCCC
Q psy9184         488 GDYQFDMYRMMRKQCQNNWQNFTPK  512 (562)
Q Consensus       488 ~~~q~dIy~lm~~~~~~~W~~~~P~  512 (562)
                      .+...|||++.-... ....+..|+
T Consensus       322 ~~~~~DiwSlGvil~-elltG~~pf  345 (467)
T PTZ00284        322 WMYSTDMWSMGCIIY-ELYTGKLLY  345 (467)
T ss_pred             CCcHHHHHHHHHHHH-HHHhCCCCC
Confidence            566799988643332 333344444

>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase

Probab=99.92  E-value=1e-24  Score=230.73  Aligned_cols=175  Identities=18%  Similarity=0.250  Sum_probs=138.8

Q ss_pred             CCceeeeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCcccccc
Q psy9184         262 ALKNCKKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTELL  335 (562)
Q Consensus       262 ~y~~~~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~l~  335 (562)
                      +|++.+.||+|+||.||+|      +.||||.+....      ........+.+|+.+++.++|                
T Consensus         1 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~------~~~~~~~~~~~E~~~l~~l~h----------------   58 (372)
T cd07853           1 DVEPDRPIGYGAFGVVWSVTDPRDGKRVALKKMPNVF------QNLVSCKRVFRELKMLCFFKH----------------   58 (372)
T ss_pred             CCcccceeeeCCCEEEEEEEECCCCCEEEEEeccccc------cchHHHHHHHHHHHHHHhCCC----------------
Confidence            3788899999999999999      789999986532      122334678899999999998                


Q ss_pred             cccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc---cCCHHHHHHHHHHHHHHHHHH
Q psy9184         336 KCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK---YRSPNQTYAMILQVVFSLAVA  412 (562)
Q Consensus       336 ~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~---~l~e~~i~~I~~QIl~aL~yL  412 (562)
                                |||+++++++....        ......+|+||||+. +++...+.   .+++..++.++.||+.||.||
T Consensus        59 ----------~niv~~~~~~~~~~--------~~~~~~~~lv~e~~~-~~l~~~~~~~~~l~~~~~~~~~~qi~~aL~~L  119 (372)
T cd07853          59 ----------DNVLSALDILQPPH--------IDPFEEIYVVTELMQ-SDLHKIIVSPQPLSSDHVKVFLYQILRGLKYL  119 (372)
T ss_pred             ----------CCcCCHhheecCCC--------ccccceEEEEeeccc-cCHHHHHhcCCCCCHHHHHHHHHHHHHHHHHH
Confidence                      99999999887521        111237899999997 44544442   489999999999999999999


Q ss_pred             HhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecC------CcEEEeecCCCccccCC
Q psy9184         413 EVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVG------EKICYYDLSQDEELFEG  486 (562)
Q Consensus       413 H~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~------~g~v~~~l~~~pelF~g  486 (562)
                      |+ .||+||||||+|||++.++                    .+||+|||+|+....      ...+.+..|++||++.+
T Consensus       120 H~-~~ivH~dlkp~Nili~~~~--------------------~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~y~aPE~~~~  178 (372)
T cd07853         120 HS-AGILHRDIKPGNLLVNSNC--------------------VLKICDFGLARVEEPDESKHMTQEVVTQYYRAPEILMG  178 (372)
T ss_pred             Hh-CCeeCCCCChHHEEECCCC--------------------CEEeccccceeecccCccccCCCCCcCCCcCCHHHHcC
Confidence            99 7999999999999999876                    799999999987543      12344667899999887


Q ss_pred             C--CCcHHHHHHHh
Q psy9184         487 E--GDYQFDMYRMM  498 (562)
Q Consensus       487 ~--~~~q~dIy~lm  498 (562)
                      .  .....|||++.
T Consensus       179 ~~~~~~~~DiwslG  192 (372)
T cd07853         179 SRHYTSAVDIWSVG  192 (372)
T ss_pred             CCCCCcHHHHHhHH
Confidence            4  35568998864

Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription

>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase

Probab=99.92  E-value=2.1e-24  Score=221.90  Aligned_cols=183  Identities=19%  Similarity=0.223  Sum_probs=143.5

Q ss_pred             CCCceeeeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCccccc
Q psy9184         261 SALKNCKKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTEL  334 (562)
Q Consensus       261 ~~y~~~~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~l  334 (562)
                      ++|.+.++||+|+||.||+|      ..||+|++.....       ......+.+|+.+++.++|               
T Consensus         6 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~-------~~~~~~~~~E~~~l~~l~h---------------   63 (309)
T cd07872           6 ETYIKLEKLGEGTYATVFKGRSKLTENLVALKEIRLEHE-------EGAPCTAIREVSLLKDLKH---------------   63 (309)
T ss_pred             CceEEEEEecccCCEEEEEEEecCCCCeEEEEEeecccc-------CCcchhHHHHHHHHHhCCC---------------
Confidence            67999999999999999999      7899999986531       1112356789999999998               


Q ss_pred             ccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc----cCCHHHHHHHHHHHHHHHH
Q psy9184         335 LKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK----YRSPNQTYAMILQVVFSLA  410 (562)
Q Consensus       335 ~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~----~l~e~~i~~I~~QIl~aL~  410 (562)
                                 |||+++++.+..             ++..|+||||+.+ ++.+.+.    .+++..+..++.||+.||.
T Consensus        64 -----------~~iv~~~~~~~~-------------~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~  118 (309)
T cd07872          64 -----------ANIVTLHDIVHT-------------DKSLTLVFEYLDK-DLKQYMDDCGNIMSMHNVKIFLYQILRGLA  118 (309)
T ss_pred             -----------CCcceEEEEEee-------------CCeEEEEEeCCCC-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHH
Confidence                       999999998875             5589999999974 5555443    2788999999999999999


Q ss_pred             HHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecC-----CcEEEeecCCCccccC
Q psy9184         411 VAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVG-----EKICYYDLSQDEELFE  485 (562)
Q Consensus       411 yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~-----~g~v~~~l~~~pelF~  485 (562)
                      |||+ .||+||||||+|||++.++                    .+||+|||+++....     .....+..|++||.+.
T Consensus       119 ~lH~-~~ivH~dlkp~Nill~~~~--------------------~~kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~  177 (309)
T cd07872         119 YCHR-RKVLHRDLKPQNLLINERG--------------------ELKLADFGLARAKSVPTKTYSNEVVTLWYRPPDVLL  177 (309)
T ss_pred             HHHH-CCeecCCCCHHHEEECCCC--------------------CEEECccccceecCCCccccccccccccccCCHHHh
Confidence            9999 7999999999999999876                    799999999986542     1234466789999876


Q ss_pred             CC--CCcHHHHHHHhhcccCCCCCCCCCC
Q psy9184         486 GE--GDYQFDMYRMMRKQCQNNWQNFTPK  512 (562)
Q Consensus       486 g~--~~~q~dIy~lm~~~~~~~W~~~~P~  512 (562)
                      +.  .+...|||++.-... ..+.+..|+
T Consensus       178 ~~~~~~~~~DiwslG~il~-el~tg~~pf  205 (309)
T cd07872         178 GSSEYSTQIDMWGVGCIFF-EMASGRPLF  205 (309)
T ss_pred             CCCCCCcHHHHHHHHHHHH-HHHhCCCCC
Confidence            53  456699988643332 333444444

Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play

>KOG4717|consensus

Probab=99.91  E-value=1.6e-24  Score=228.25  Aligned_cols=227  Identities=19%  Similarity=0.194  Sum_probs=170.1

Q ss_pred             CCCceeeeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCccccc
Q psy9184         261 SALKNCKKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTEL  334 (562)
Q Consensus       261 ~~y~~~~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~l  334 (562)
                      +-|.+.+.||+|.|+.|-+|      +.||||+|.+...      +.....++.+|++.|+.++|               
T Consensus        18 GLYDLekTlG~GHFAVVKLArHVFTGekVAVKviDKTKl------D~~st~hlfqEVRCMKLVQH---------------   76 (864)
T KOG4717|consen   18 GLYDLEKTLGRGHFAVVKLARHVFTGEKVAVKVIDKTKL------DTLSTGHLFQEVRCMKLVQH---------------   76 (864)
T ss_pred             eeehhhhhhcCCceehhhhhhhhcccceeEEEEeccccc------chhhhhHHHHHHHHHHHhcC---------------
Confidence            45788899999999999988      9999999998742      33445688999999999999               


Q ss_pred             ccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCcccccc----CCHHHHHHHHHHHHHHHH
Q psy9184         335 LKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIKY----RSPNQTYAMILQVVFSLA  410 (562)
Q Consensus       335 ~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~~----l~e~~i~~I~~QIl~aL~  410 (562)
                                 ||||++|++...             +..+|||+|+-++|++++.+.+    ++++.++.+|+||+.|+.
T Consensus        77 -----------pNiVRLYEViDT-------------QTKlyLiLELGD~GDl~DyImKHe~Gl~E~La~kYF~QI~~AI~  132 (864)
T KOG4717|consen   77 -----------PNIVRLYEVIDT-------------QTKLYLILELGDGGDLFDYIMKHEEGLNEDLAKKYFAQIVHAIS  132 (864)
T ss_pred             -----------cCeeeeeehhcc-------------cceEEEEEEecCCchHHHHHHhhhccccHHHHHHHHHHHHHHHH
Confidence                       999999999986             5689999999999999999875    899999999999999999


Q ss_pred             HHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecC----CcEEEeecCCCccccCC
Q psy9184         411 VAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVG----EKICYYDLSQDEELFEG  486 (562)
Q Consensus       411 yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~----~g~v~~~l~~~pelF~g  486 (562)
                      |+|+ ..+|||||||+|+.+...-.                   -|||.|||++-.+.+    ...++.-.|.+||++-|
T Consensus       133 YCHq-LHVVHRDLKPENVVFFEKlG-------------------lVKLTDFGFSNkf~PG~kL~TsCGSLAYSAPEILLG  192 (864)
T KOG4717|consen  133 YCHQ-LHVVHRDLKPENVVFFEKLG-------------------LVKLTDFGFSNKFQPGKKLTTSCGSLAYSAPEILLG  192 (864)
T ss_pred             HHhh-hhhhcccCCcceeEEeeecC-------------------ceEeeeccccccCCCcchhhcccchhhccCchhhhc
Confidence            9999 89999999999998877642                   699999999988776    23455667899999988


Q ss_pred             C-CC-cHHHHHHHhhcccCCCCCCCCCCChhhhHHHHHHHHhhcccCCCCCCCchhHHHHHHHHHHHhcCCCcCcC
Q psy9184         487 E-GD-YQFDMYRMMRKQCQNNWQNFTPKNNVFWIHYLVDKATCLKKGYQYLRAPRHQAFELLEELGQNALHFDSCY  560 (562)
Q Consensus       487 ~-~~-~q~dIy~lm~~~~~~~W~~~~P~tn~~wl~yl~~~Ll~~~~~~~~~~~~~~~~~~~l~~l~~~~l~~~s~~  560 (562)
                      . ++ +..|||++.-... ---.+-.||....--. .....++  .+|.-+.    -.-++.+.|+..||+-+..+
T Consensus       193 DsYDAPAVDiWSLGVILy-MLVCGq~PFqeANDSE-TLTmImD--CKYtvPs----hvS~eCrdLI~sMLvRdPkk  260 (864)
T KOG4717|consen  193 DSYDAPAVDIWSLGVILY-MLVCGQPPFQEANDSE-TLTMIMD--CKYTVPS----HVSKECRDLIQSMLVRDPKK  260 (864)
T ss_pred             CccCCcchhhhHHHHHHH-HHHhCCCccccccchh-hhhhhhc--ccccCch----hhhHHHHHHHHHHHhcCchh
Confidence            5 33 3389987543332 1122333442221000 1122233  2333322    23556777778888766544

>KOG0599|consensus

Probab=99.91  E-value=4.5e-25  Score=217.97  Aligned_cols=177  Identities=16%  Similarity=0.224  Sum_probs=150.3

Q ss_pred             CCCceeeeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCccccc
Q psy9184         261 SALKNCKKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTEL  334 (562)
Q Consensus       261 ~~y~~~~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~l  334 (562)
                      ..|.-.+.||.|..+.|-+|      ..+|+|+|.........+......+.-.+|+.||+++..               
T Consensus        17 ~~y~pkeilgrgvss~vrRci~k~t~~e~a~kii~~~at~~~~e~~~~~~EaT~~Ev~ILRqv~G---------------   81 (411)
T KOG0599|consen   17 AKYEPKEILGRGVSSVVRRCIHKETGKEFAVKIIDVTATTESGETPYEMREATRQEISILRQVMG---------------   81 (411)
T ss_pred             hhcChHHHhcccchhhhhhhhhcccccceeEEEEEecccccCCccHHHHHHHHHHHHHHHHHhcC---------------
Confidence            34677789999999999999      889999998765544444455566778899999999987               


Q ss_pred             ccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCcccccc---CCHHHHHHHHHHHHHHHHH
Q psy9184         335 LKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIKY---RSPNQTYAMILQVVFSLAV  411 (562)
Q Consensus       335 ~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~~---l~e~~i~~I~~QIl~aL~y  411 (562)
                                ||+|+++.++|++             +..+|+|+|+|+.|.+++.+..   +++++++.|++|++.|+.|
T Consensus        82 ----------HP~II~l~D~yes-------------~sF~FlVFdl~prGELFDyLts~VtlSEK~tR~iMrqlfegVey  138 (411)
T KOG0599|consen   82 ----------HPYIIDLQDVYES-------------DAFVFLVFDLMPRGELFDYLTSKVTLSEKETRRIMRQLFEGVEY  138 (411)
T ss_pred             ----------CCcEEEeeeeccC-------------cchhhhhhhhcccchHHHHhhhheeecHHHHHHHHHHHHHHHHH
Confidence                      8999999999986             5689999999999999998864   9999999999999999999


Q ss_pred             HHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecCC----cEEEeecCCCccccCC-
Q psy9184         412 AEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVGE----KICYYDLSQDEELFEG-  486 (562)
Q Consensus       412 LH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~~----g~v~~~l~~~pelF~g-  486 (562)
                      ||. .+|+||||||+|||++.+.                    +++|+|||+|..+..+    ..++++.|.+||...+ 
T Consensus       139 lHa-~~IVHRDLKpENILlddn~--------------------~i~isDFGFa~~l~~GekLrelCGTPgYLAPEtikC~  197 (411)
T KOG0599|consen  139 LHA-RNIVHRDLKPENILLDDNM--------------------NIKISDFGFACQLEPGEKLRELCGTPGYLAPETIKCS  197 (411)
T ss_pred             HHH-hhhhhcccChhheeecccc--------------------ceEEeccceeeccCCchhHHHhcCCCcccChhheeee
Confidence            999 6999999999999999986                    7999999999998763    4567999999997655 


Q ss_pred             ----CCCcH--HHHHH
Q psy9184         487 ----EGDYQ--FDMYR  496 (562)
Q Consensus       487 ----~~~~q--~dIy~  496 (562)
                          ...|.  .|+|.
T Consensus       198 m~e~~pGYs~EVD~Wa  213 (411)
T KOG0599|consen  198 MYENHPGYSKEVDEWA  213 (411)
T ss_pred             cccCCCCccchhhHHH
Confidence                22333  67765

>PTZ00266 NIMA-related protein kinase; Provisional

Probab=99.91  E-value=2e-24  Score=249.75  Aligned_cols=247  Identities=20%  Similarity=0.210  Sum_probs=166.9

Q ss_pred             CCCceeeeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCccccc
Q psy9184         261 SALKNCKKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTEL  334 (562)
Q Consensus       261 ~~y~~~~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~l  334 (562)
                      .+|.++++||+|+||.||+|      ..+|+|++....      ........+..|+.+++.|+|               
T Consensus        13 ~~YeIl~kLG~GgFGtVYLAkdk~tg~~vAlKvIk~~~------l~e~~~~~~~~EI~IL~~L~H---------------   71 (1021)
T PTZ00266         13 NEYEVIKKIGNGRFGEVFLVKHKRTQEFFCWKAISYRG------LKEREKSQLVIEVNVMRELKH---------------   71 (1021)
T ss_pred             CCEEEEEEEecCCCeEEEEEEECCCCeEEEEEEEeccc------cCHHHHHHHHHHHHHHHHcCC---------------
Confidence            67999999999999999999      789999998653      123445678899999999998               


Q ss_pred             ccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc-------cCCHHHHHHHHHHHHH
Q psy9184         335 LKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK-------YRSPNQTYAMILQVVF  407 (562)
Q Consensus       335 ~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~-------~l~e~~i~~I~~QIl~  407 (562)
                                 |||++++++|....           ...+||||||+.+|+|...+.       .+++..++.|+.||+.
T Consensus        72 -----------PNIVrl~d~f~de~-----------~~~lyIVMEY~~gGSL~~lL~k~~~~~g~L~E~~Il~Ia~QIL~  129 (1021)
T PTZ00266         72 -----------KNIVRYIDRFLNKA-----------NQKLYILMEFCDAGDLSRNIQKCYKMFGKIEEHAIVDITRQLLH  129 (1021)
T ss_pred             -----------CCcCeEEEEEEecC-----------CCEEEEEEeCCCCCcHHHHHHHHhhccCCCCHHHHHHHHHHHHH
Confidence                       99999999886422           457999999999998876653       4899999999999999


Q ss_pred             HHHHHHhhCC-------eEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecC----CcEEEee
Q psy9184         408 SLAVAEVELE-------FEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVG----EKICYYD  476 (562)
Q Consensus       408 aL~yLH~~~~-------IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~----~g~v~~~  476 (562)
                      ||.|||+ .+       ||||||||+||||...........  ..... ......+||+|||+++....    ..++++.
T Consensus       130 ALaYLHs-~g~~~~~k~IVHRDLKPeNILL~s~~~~lg~i~--~~~~n-~ng~~iVKLsDFGlAr~l~~~s~~~s~vGTp  205 (1021)
T PTZ00266        130 ALAYCHN-LKDGPNGERVLHRDLKPQNIFLSTGIRHIGKIT--AQANN-LNGRPIAKIGDFGLSKNIGIESMAHSCVGTP  205 (1021)
T ss_pred             HHHHHHh-cccccccCCceeccCcHHHeEeecCcccccccc--ccccc-cCCCCceEEccCCccccccccccccccCCCc
Confidence            9999998 44       999999999999976431100000  00000 01112599999999987643    3456788


Q ss_pred             cCCCccccCCC---CCcHHHHHHHhhcccCCCCCCCCCCChhhhHHHHHHHHhhcccCCCCCCCchhHHHHHHHHHHHhc
Q psy9184         477 LSQDEELFEGE---GDYQFDMYRMMRKQCQNNWQNFTPKNNVFWIHYLVDKATCLKKGYQYLRAPRHQAFELLEELGQNA  553 (562)
Q Consensus       477 l~~~pelF~g~---~~~q~dIy~lm~~~~~~~W~~~~P~tn~~wl~yl~~~Ll~~~~~~~~~~~~~~~~~~~l~~l~~~~  553 (562)
                      .|++||++.+.   ....+|||++.-.. .....+..|+....-+..+...+.. ...++...     .-..+..|+..|
T Consensus       206 ~YmAPEvL~ge~~~~s~KSDVWSLG~IL-YELLTGk~PF~~~~~~~qli~~lk~-~p~lpi~~-----~S~eL~dLI~~~  278 (1021)
T PTZ00266        206 YYWSPELLLHETKSYDDKSDMWALGCII-YELCSGKTPFHKANNFSQLISELKR-GPDLPIKG-----KSKELNILIKNL  278 (1021)
T ss_pred             cccCHHHHhccCCCCCchhHHHHHHHHH-HHHHHCCCCCCcCCcHHHHHHHHhc-CCCCCcCC-----CCHHHHHHHHHH
Confidence            89999988642   45568999864333 2333444454321112222222222 11111110     123566677777


Q ss_pred             CCCcCcCC
Q psy9184         554 LHFDSCYE  561 (562)
Q Consensus       554 l~~~s~~~  561 (562)
                      |.++...|
T Consensus       279 L~~dPeeR  286 (1021)
T PTZ00266        279 LNLSAKER  286 (1021)
T ss_pred             hcCChhHC
Confidence            77665443

>KOG0586|consensus

Probab=99.91  E-value=8.2e-25  Score=235.90  Aligned_cols=186  Identities=21%  Similarity=0.283  Sum_probs=155.9

Q ss_pred             CCCceeeeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCccccc
Q psy9184         261 SALKNCKKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTEL  334 (562)
Q Consensus       261 ~~y~~~~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~l  334 (562)
                      ..|.+.+.||+|.|+.|.+|      ..||||++.+..      .+....+.+.+|+.+|+.|+|               
T Consensus        56 g~y~i~~tig~g~f~~V~La~~~~t~~~VaiK~idkt~------ln~~~~~k~~rev~imk~l~H---------------  114 (596)
T KOG0586|consen   56 GLYVIIKTIGKGNFAKVKLARHILTGTEVAIKIIDKTQ------LNPSKRQKLGREVDIMKSLNH---------------  114 (596)
T ss_pred             cceeeeeeeccceeEEEEeeEecCCCceEEEEEehhcc------cChHHHHHHHHHHHHHHhcCC---------------
Confidence            56899999999999999999      899999999875      234455668999999999999               


Q ss_pred             ccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCcccccc---CCHHHHHHHHHHHHHHHHH
Q psy9184         335 LKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIKY---RSPNQTYAMILQVVFSLAV  411 (562)
Q Consensus       335 ~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~~---l~e~~i~~I~~QIl~aL~y  411 (562)
                                 ||||++|.+...             ...+|+||||+.+|.+++++..   +.+..+..+|+|++.|++|
T Consensus       115 -----------PnIvkl~~v~~t-------------~~~lylV~eya~~ge~~~yl~~~gr~~e~~ar~~F~q~vsaveY  170 (596)
T KOG0586|consen  115 -----------PNIVKLFSVIET-------------EATLYLVMEYASGGELFDYLVKHGRMKEKEARAKFRQIVSAVEY  170 (596)
T ss_pred             -----------cceeeeeeeeee-------------cceeEEEEEeccCchhHHHHHhcccchhhhhhhhhHHHHHHHHH
Confidence                       999999999875             5699999999999999888864   7789999999999999999


Q ss_pred             HHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecC----CcEEEeecCCCccccCCC
Q psy9184         412 AEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVG----EKICYYDLSQDEELFEGE  487 (562)
Q Consensus       412 LH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~----~g~v~~~l~~~pelF~g~  487 (562)
                      ||+ .+|+|||||++||||+.+-                    .+||+|||+|..+..    ...++..-|.+||+|.|.
T Consensus       171 cH~-k~ivHrdLk~eNilL~~~m--------------------nikIaDfgfS~~~~~~~~lqt~cgsppyAaPEl~~g~  229 (596)
T KOG0586|consen  171 CHS-KNIVHRDLKAENILLDENM--------------------NIKIADFGFSTFFDYGLMLQTFCGSPPYAAPELFNGK  229 (596)
T ss_pred             Hhh-cceeccccchhhccccccc--------------------ceeeeccccceeecccccccccCCCCCccChHhhcCc
Confidence            999 6999999999999999985                    699999999998875    334567788999999995


Q ss_pred             C--CcHHHHHHHhhcccCCCCCCCCCCC
Q psy9184         488 G--DYQFDMYRMMRKQCQNNWQNFTPKN  513 (562)
Q Consensus       488 ~--~~q~dIy~lm~~~~~~~W~~~~P~t  513 (562)
                      .  ..+.|+|. ++..++-.-.+.-||.
T Consensus       230 ~y~gpe~D~Ws-lgvvly~LV~GsLPFD  256 (596)
T KOG0586|consen  230 KYDGPEVDIWS-LGVVLYALVEGSLPFD  256 (596)
T ss_pred             ccCCcceehhh-hhhhheeeeecccccC
Confidence            3  34588866 4455444445555553

>KOG0197|consensus

Probab=99.91  E-value=4.7e-25  Score=234.98  Aligned_cols=169  Identities=22%  Similarity=0.280  Sum_probs=138.7

Q ss_pred             CCCCCceeeeeeccCceEEEEE-----eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCcccc
Q psy9184         259 PSSALKNCKKIGEGVYGEVFKL-----NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTE  333 (562)
Q Consensus       259 ~~~~y~~~~~LG~GsfG~Vyka-----~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~  333 (562)
                      +...+.+++.||+|.||+||+|     ..||+|.++...         ...+++++|+.+|++|+|              
T Consensus       204 ~r~~l~l~~~LG~G~FG~V~~g~~~~~~~vavk~ik~~~---------m~~~~f~~Ea~iMk~L~H--------------  260 (468)
T KOG0197|consen  204 PREELKLIRELGSGQFGEVWLGKWNGSTKVAVKTIKEGS---------MSPEAFLREAQIMKKLRH--------------  260 (468)
T ss_pred             cHHHHHHHHHhcCCccceEEEEEEcCCCcccceEEeccc---------cChhHHHHHHHHHHhCcc--------------
Confidence            3455678999999999999999     699999998642         223577899999999999              


Q ss_pred             cccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCcccccc-----CCHHHHHHHHHHHHHH
Q psy9184         334 LLKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIKY-----RSPNQTYAMILQVVFS  408 (562)
Q Consensus       334 l~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~~-----l~e~~i~~I~~QIl~a  408 (562)
                                  ++||++++++..             ++.+||||||+..|+|++.++.     ++..+...++.|||+|
T Consensus       261 ------------~~lV~l~gV~~~-------------~~piyIVtE~m~~GsLl~yLr~~~~~~l~~~~Ll~~a~qIaeG  315 (468)
T KOG0197|consen  261 ------------EKLVKLYGVCTK-------------QEPIYIVTEYMPKGSLLDYLRTREGGLLNLPQLLDFAAQIAEG  315 (468)
T ss_pred             ------------cCeEEEEEEEec-------------CCceEEEEEecccCcHHHHhhhcCCCccchHHHHHHHHHHHHH
Confidence                        999999999875             4479999999999999998863     8889999999999999


Q ss_pred             HHHHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecCC------cEEEeecCCCcc
Q psy9184         409 LAVAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVGE------KICYYDLSQDEE  482 (562)
Q Consensus       409 L~yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~~------g~v~~~l~~~pe  482 (562)
                      ++||++ +++|||||-..|||++.+.                    .+||+||||||...+.      |.-+---|++||
T Consensus       316 M~YLes-~~~IHRDLAARNiLV~~~~--------------------~vKIsDFGLAr~~~d~~Y~~~~~~kfPIkWtAPE  374 (468)
T KOG0197|consen  316 MAYLES-KNYIHRDLAARNILVDEDL--------------------VVKISDFGLARLIGDDEYTASEGGKFPIKWTAPE  374 (468)
T ss_pred             HHHHHh-CCccchhhhhhheeeccCc--------------------eEEEcccccccccCCCceeecCCCCCCceecCHH
Confidence            999999 7999999999999999997                    8999999999965442      111223466888


Q ss_pred             ccCC-CCCcHHHHHH
Q psy9184         483 LFEG-EGDYQFDMYR  496 (562)
Q Consensus       483 lF~g-~~~~q~dIy~  496 (562)
                      .|.- .-..++|+|+
T Consensus       375 a~~~~~FS~kSDVWS  389 (468)
T KOG0197|consen  375 ALNYGKFSSKSDVWS  389 (468)
T ss_pred             HHhhCCcccccceee
Confidence            6654 4455566655

>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases

Probab=99.91  E-value=7.6e-24  Score=210.51  Aligned_cols=232  Identities=19%  Similarity=0.236  Sum_probs=171.3

Q ss_pred             CCCCCceeeeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCccc
Q psy9184         259 PSSALKNCKKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFT  332 (562)
Q Consensus       259 ~~~~y~~~~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv  332 (562)
                      |.++|++.+.||.|+||.||+|      ..+|+|++....        ....+.+.+|+.+++.++|             
T Consensus         1 ~~~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~--------~~~~~~~~~e~~~l~~~~h-------------   59 (262)
T cd06613           1 PQEDYELIQRIGSGTYGDVYKARDIATGELVAIKVIKLEP--------GDDFEIIQQEISMLKECRH-------------   59 (262)
T ss_pred             CccceEEEEEecCCCceEEEEeEecCCCCEEEEEEEEcCc--------hhhHHHHHHHHHHHHhCCC-------------
Confidence            3467999999999999999999      679999998653        2245678899999999998             


Q ss_pred             ccccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCcccc----ccCCHHHHHHHHHHHHHH
Q psy9184         333 ELLKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDI----KYRSPNQTYAMILQVVFS  408 (562)
Q Consensus       333 ~l~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l----~~l~e~~i~~I~~QIl~a  408 (562)
                                   |||+++++.+..             .+.+|++|||+.++++.+.+    ..+++.++..++.|++.|
T Consensus        60 -------------~~i~~~~~~~~~-------------~~~~~l~~e~~~~~~l~~~~~~~~~~l~~~~~~~~~~ql~~~  113 (262)
T cd06613          60 -------------PNIVAYFGSYLR-------------RDKLWIVMEYCGGGSLQDIYQVTRGPLSELQIAYVCRETLKG  113 (262)
T ss_pred             -------------CChhceEEEEEe-------------CCEEEEEEeCCCCCcHHHHHHhhccCCCHHHHHHHHHHHHHH
Confidence                         999999988765             55899999999988776544    248899999999999999


Q ss_pred             HHHHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecCC-----cEEEeecCCCccc
Q psy9184         409 LAVAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVGE-----KICYYDLSQDEEL  483 (562)
Q Consensus       409 L~yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~~-----g~v~~~l~~~pel  483 (562)
                      |.|||+ ++|+||||+|+||+++.++                    .++|+|||++......     ....+..|.+||+
T Consensus       114 l~~lh~-~~i~h~dl~p~ni~i~~~~--------------------~~~l~d~g~~~~~~~~~~~~~~~~~~~~y~~Pe~  172 (262)
T cd06613         114 LAYLHE-TGKIHRDIKGANILLTEDG--------------------DVKLADFGVSAQLTATIAKRKSFIGTPYWMAPEV  172 (262)
T ss_pred             HHHHHh-CCceecCCChhhEEECCCC--------------------CEEECccccchhhhhhhhccccccCCccccCchh
Confidence            999999 7999999999999999876                    6999999998865432     2233556889998


Q ss_pred             cCCC----CCcHHHHHHHhhcccCCCCCCCCCCChhhhHHHHHHHHhhcccCCCCCCCc-hhHHHHHHHHHHHhcCCCcC
Q psy9184         484 FEGE----GDYQFDMYRMMRKQCQNNWQNFTPKNNVFWIHYLVDKATCLKKGYQYLRAP-RHQAFELLEELGQNALHFDS  558 (562)
Q Consensus       484 F~g~----~~~q~dIy~lm~~~~~~~W~~~~P~tn~~wl~yl~~~Ll~~~~~~~~~~~~-~~~~~~~l~~l~~~~l~~~s  558 (562)
                      +.+.    .+..+|+|++ |......+.+..|+.+.....-+.. +..  ..++..... ..+.-..+.+|.+.++..+.
T Consensus       173 ~~~~~~~~~~~~~Di~sl-G~~l~~~~tg~~p~~~~~~~~~~~~-~~~--~~~~~~~~~~~~~~~~~~~~li~~~l~~~p  248 (262)
T cd06613         173 AAVERKGGYDGKCDIWAL-GITAIELAELQPPMFDLHPMRALFL-ISK--SNFPPPKLKDKEKWSPVFHDFIKKCLTKDP  248 (262)
T ss_pred             hcccccCCcCchhhhHHH-HHHHHHHHhCCCCCCCCCHHHHHHH-HHh--ccCCCccccchhhhhHHHHHHHHHHcCCCh
Confidence            8754    4556899875 4444455556666543321111111 111  122222211 12234678889999999887


Q ss_pred             cCCC
Q psy9184         559 CYEM  562 (562)
Q Consensus       559 ~~~~  562 (562)
                      ..|+
T Consensus       249 ~~Rp  252 (262)
T cd06613         249 KKRP  252 (262)
T ss_pred             hhCC
Confidence            7664

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ

>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5

Probab=99.91  E-value=9.3e-24  Score=213.69  Aligned_cols=169  Identities=22%  Similarity=0.301  Sum_probs=140.6

Q ss_pred             CCceeeeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCcccccc
Q psy9184         262 ALKNCKKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTELL  335 (562)
Q Consensus       262 ~y~~~~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~l~  335 (562)
                      +|+..+.||+|+||.||+|      +.||+|++....       .......+.+|+.+++.++|                
T Consensus         2 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~-------~~~~~~~~~~E~~~l~~l~h----------------   58 (279)
T cd06619           2 DIQYQEILGHGNGGTVYKAYHLLTRRILAVKVIPLDI-------TVELQKQIMSELEILYKCDS----------------   58 (279)
T ss_pred             cchheeeeccCCCeEEEEEEEcCCCcEEEEEEEecCC-------ChHHHHHHHHHHHHHHhCCC----------------
Confidence            5788899999999999999      889999987642       12334578899999999998                


Q ss_pred             cccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccccCCHHHHHHHHHHHHHHHHHHHhh
Q psy9184         336 KCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIKYRSPNQTYAMILQVVFSLAVAEVE  415 (562)
Q Consensus       336 ~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~~l~e~~i~~I~~QIl~aL~yLH~~  415 (562)
                                |||+++++.|..             ++..++||||+++|++ ..+..+++..+..++.|++.||.|||+ 
T Consensus        59 ----------~~iv~~~~~~~~-------------~~~~~lv~e~~~~~~l-~~~~~~~~~~~~~~~~qi~~~l~~lH~-  113 (279)
T cd06619          59 ----------PYIIGFYGAFFV-------------ENRISICTEFMDGGSL-DVYRKIPEHVLGRIAVAVVKGLTYLWS-  113 (279)
T ss_pred             ----------CCeeeEEEEEEE-------------CCEEEEEEecCCCCCh-HHhhcCCHHHHHHHHHHHHHHHHHHHH-
Confidence                      999999998875             5588999999998855 445568899999999999999999999 


Q ss_pred             CCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecC---CcEEEeecCCCccccCCC-CCcH
Q psy9184         416 LEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVG---EKICYYDLSQDEELFEGE-GDYQ  491 (562)
Q Consensus       416 ~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~---~g~v~~~l~~~pelF~g~-~~~q  491 (562)
                      .||+|+||||+|||++.++                    .++|+|||++.....   ...+.+..|++||.+.+. ....
T Consensus       114 ~~i~H~dlkp~Nill~~~~--------------------~~~l~dfg~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~  173 (279)
T cd06619         114 LKILHRDVKPSNMLVNTRG--------------------QVKLCDFGVSTQLVNSIAKTYVGTNAYMAPERISGEQYGIH  173 (279)
T ss_pred             CCEeeCCCCHHHEEECCCC--------------------CEEEeeCCcceecccccccCCCCChhhcCceeecCCCCCCc
Confidence            7999999999999999886                    799999999986543   233456678899988763 4556


Q ss_pred             HHHHHHh
Q psy9184         492 FDMYRMM  498 (562)
Q Consensus       492 ~dIy~lm  498 (562)
                      .|+|++.
T Consensus       174 ~DvwslG  180 (279)
T cd06619         174 SDVWSLG  180 (279)
T ss_pred             chHHHHH
Confidence            8988864

Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p

>KOG1187|consensus

Probab=99.91  E-value=6.8e-25  Score=232.44  Aligned_cols=172  Identities=19%  Similarity=0.193  Sum_probs=140.0

Q ss_pred             CCCCCceeeeeeccCceEEEEE-----eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCcccc
Q psy9184         259 PSSALKNCKKIGEGVYGEVFKL-----NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTE  333 (562)
Q Consensus       259 ~~~~y~~~~~LG~GsfG~Vyka-----~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~  333 (562)
                      ++++|.....||+|+||.||+|     ..||||.+.....       +. ..+|.+|+.++.+++|              
T Consensus        73 AT~~Fs~~~~ig~Ggfg~VYkG~l~~~~~vAVK~~~~~~~-------~~-~~eF~~Ei~~ls~l~H--------------  130 (361)
T KOG1187|consen   73 ATNNFSESNLIGEGGFGTVYKGVLSDGTVVAVKRLSSNSG-------QG-EREFLNEVEILSRLRH--------------  130 (361)
T ss_pred             HHhCCchhcceecCCCeEEEEEEECCCCEEEEEEecCCCC-------cc-hhHHHHHHHHHhcCCC--------------
Confidence            3567888899999999999999     5899997776431       11 3459999999999999              


Q ss_pred             cccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCC-eEEEEEEecCCCCCccccc-----cCCHHHHHHHHHHHHH
Q psy9184         334 LLKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEED-QIFIILELKNGGNDSGDIK-----YRSPNQTYAMILQVVF  407 (562)
Q Consensus       334 l~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~-~l~LVmE~~~gG~ll~~l~-----~l~e~~i~~I~~QIl~  407 (562)
                                  ||+|+|++++.+             .+ +.+||+||+.+|+|.+.+.     .++|.....|+.+++.
T Consensus       131 ------------~Nlv~LlGyC~e-------------~~~~~~LVYEym~nGsL~d~L~~~~~~~L~W~~R~kIa~g~A~  185 (361)
T KOG1187|consen  131 ------------PNLVKLLGYCLE-------------GGEHRLLVYEYMPNGSLEDHLHGKKGEPLDWETRLKIALGAAR  185 (361)
T ss_pred             ------------cCcccEEEEEec-------------CCceEEEEEEccCCCCHHHHhCCCCCCCCCHHHHHHHHHHHHH
Confidence                        899999888875             33 5999999999998866653     4789999999999999


Q ss_pred             HHHHHHhhCC--eEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecC-CcE-----EEeecCC
Q psy9184         408 SLAVAEVELE--FEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVG-EKI-----CYYDLSQ  479 (562)
Q Consensus       408 aL~yLH~~~~--IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~-~g~-----v~~~l~~  479 (562)
                      ||+|||+.+.  ||||||||+|||++.+.                    .+||+|||||+.... ...     .++..|.
T Consensus       186 gL~yLH~~~~~~iiHrDiKssNILLD~~~--------------------~aKlsDFGLa~~~~~~~~~~~~~~~gt~gY~  245 (361)
T KOG1187|consen  186 GLAYLHEGCPPPIIHRDIKSSNILLDEDF--------------------NAKLSDFGLAKLGPEGDTSVSTTVMGTFGYL  245 (361)
T ss_pred             HHHHHccCCCCCEecCCCCHHHeeECCCC--------------------CEEccCccCcccCCccccceeeecCCCCccC
Confidence            9999999764  99999999999999874                    899999999977654 222     3566789


Q ss_pred             CccccCC-CCCcHHHHHHH
Q psy9184         480 DEELFEG-EGDYQFDMYRM  497 (562)
Q Consensus       480 ~pelF~g-~~~~q~dIy~l  497 (562)
                      +||.+.. .-....|||+-
T Consensus       246 ~PEy~~~g~lt~KsDVySF  264 (361)
T KOG1187|consen  246 APEYASTGKLTEKSDVYSF  264 (361)
T ss_pred             ChhhhccCCcCcccccccc
Confidence            9998864 44555777763

>KOG1035|consensus

Probab=99.91  E-value=7.2e-25  Score=249.61  Aligned_cols=210  Identities=19%  Similarity=0.222  Sum_probs=148.6

Q ss_pred             CCCceeeeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCccccc
Q psy9184         261 SALKNCKKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTEL  334 (562)
Q Consensus       261 ~~y~~~~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~l  334 (562)
                      .+|+.+..||+||||.||++      ..||||.|+...       ..+....+++|+.+|.+|+|         ||+|++
T Consensus       479 ~DFEEL~lLGkGGFG~VvkVRNKlDGr~YAIKKIpl~~-------s~~~~skI~rEVk~LArLnH---------pNVVRY  542 (1351)
T KOG1035|consen  479 NDFEELELLGKGGFGSVVKVRNKLDGREYAIKKIPLKA-------SDKLYSKILREVKLLARLNH---------PNVVRY  542 (1351)
T ss_pred             hhhHHHHHhcCCCCceEEEEeecccchhhhhhhccCch-------HHHHHHHHHHHHHHHhhcCC---------cceeee
Confidence            46889999999999999999      899999999863       46667889999999999999         888888


Q ss_pred             ccccccCCCCC---------------------CCceeeh----------hhh---hcc-ccCCCC---------------
Q psy9184         335 LKCSCVRGRYP---------------------DRLVTLW----------EEF---AKT-KKSYND---------------  364 (562)
Q Consensus       335 ~~~~iv~g~~~---------------------pnIv~l~----------~~f---~~~-~~s~~~---------------  364 (562)
                      +.++|....-.                     -..+...          ..+   .+. ..++..               
T Consensus       543 ysAWVEs~~~~~~~ei~~~~~~~~sQs~s~~~~~~~~~q~t~~p~~~~~~~~~~~~dd~sss~~~~~~~~~~~~d~e~~d  622 (1351)
T KOG1035|consen  543 YSAWVESTAELTVLEIVASDSESRSQSASKYNGVDIRYQPTSSPSLTLSELDSEDEDDKSSSYTTRKASYESSTDEENDD  622 (1351)
T ss_pred             ehhhhccCCccccccccccchhhhcccCCCcccceeeeccCCCcccCcchhhccccCccccccccccccccccCCccccc
Confidence            87766411100                     0000000          000   000 000000               


Q ss_pred             ---CC---C-------------------------CCCC--------CeEEEEEEecCCCCCcccccc---C--CHHHHHH
Q psy9184         365 ---HP---S-------------------------MFEE--------DQIFIILELKNGGNDSGDIKY---R--SPNQTYA  400 (562)
Q Consensus       365 ---~p---~-------------------------~~~~--------~~l~LVmE~~~gG~ll~~l~~---l--~e~~i~~  400 (562)
                         ++   +                         ...+        ..+||.||||+.- ++..+..   +  ....++.
T Consensus       623 ~dedg~~~S~tS~~e~~~~~d~~~ess~s~~~~~n~~e~~~~~q~~~~LYIQMEyCE~~-ll~~iI~~N~~~~~~d~~wr  701 (1351)
T KOG1035|consen  623 SDEDGRNLSNTSDSEGSVILDDTSESSESIPKTENSSEPMVPVQKPLILYIQMEYCEKT-LLRDIIRRNHFNSQRDEAWR  701 (1351)
T ss_pred             ccccccccccccccCCccccCcchhhhhhccccCCccccccccccceEEEEEHhhhhhh-HHHHHHHhcccchhhHHHHH
Confidence               00   0                         0001        3589999999854 4444432   3  3788999


Q ss_pred             HHHHHHHHHHHHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecC-----------
Q psy9184         401 MILQVVFSLAVAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVG-----------  469 (562)
Q Consensus       401 I~~QIl~aL~yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~-----------  469 (562)
                      +|+||+.||+|+|+ +|||||||||.||+++..+                    .|||+|||+|.....           
T Consensus       702 LFreIlEGLaYIH~-~giIHRDLKP~NIFLd~~~--------------------~VKIGDFGLAt~~~~~~~~~d~~~~~  760 (1351)
T KOG1035|consen  702 LFREILEGLAYIHD-QGIIHRDLKPRNIFLDSRN--------------------SVKIGDFGLATDLKENLESIDQDLSF  760 (1351)
T ss_pred             HHHHHHHHHHHHHh-CceeeccCCcceeEEcCCC--------------------CeeecccccchhhhhhhhhHhhccCc
Confidence            99999999999999 7999999999999999876                    799999999987221           


Q ss_pred             ------------CcEEEeecCCCccccCCCC----CcHHHHHHHhhcccCCCCCCC
Q psy9184         470 ------------EKICYYDLSQDEELFEGEG----DYQFDMYRMMRKQCQNNWQNF  509 (562)
Q Consensus       470 ------------~g~v~~~l~~~pelF~g~~----~~q~dIy~lm~~~~~~~W~~~  509 (562)
                                  .+-++|-+|++||+|.+..    +.+.|+|++.-. +-++|..|
T Consensus       761 ~~~~~g~~~~~~Ts~VGTalYvAPEll~~~~~~~Yn~KiDmYSLGIV-lFEM~yPF  815 (1351)
T KOG1035|consen  761 STNRAGSNDGDLTSQVGTALYVAPELLSDTSSNKYNSKIDMYSLGIV-LFEMLYPF  815 (1351)
T ss_pred             cccccCCCCcccccccceeeeecHHHhcccccccccchhhhHHHHHH-HHHHhccC
Confidence                        4678899999999999854    445999986433 33444443

>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase

Probab=99.91  E-value=4.5e-24  Score=217.20  Aligned_cols=227  Identities=18%  Similarity=0.228  Sum_probs=164.9

Q ss_pred             CCceeeeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCcccccc
Q psy9184         262 ALKNCKKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTELL  335 (562)
Q Consensus       262 ~y~~~~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~l~  335 (562)
                      +|++.+.||+|+||.||++      +.+|+|++....     ....+....+.+|+.+++.++|                
T Consensus         2 ~y~~~~~ig~g~~~~vy~~~~~~~~~~~aiK~~~~~~-----~~~~~~~~~~~~e~~~l~~l~h----------------   60 (290)
T cd05580           2 DFEFIKTLGTGSFGRVMLVRHKGSGKYYALKILSKAK-----IVKLKQVEHVLNEKRILQSIRH----------------   60 (290)
T ss_pred             ceEEEEEeecCCCeEEEEEEEcCCCCEEEEEEEEHHH-----hhhhhHHHHHHHHHHHHHhCCC----------------
Confidence            5889999999999999999      889999997542     1223445678899999999998                


Q ss_pred             cccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc---cCCHHHHHHHHHHHHHHHHHH
Q psy9184         336 KCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK---YRSPNQTYAMILQVVFSLAVA  412 (562)
Q Consensus       336 ~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~---~l~e~~i~~I~~QIl~aL~yL  412 (562)
                                |||+++++.+..             ++.+|+||||+.+|++.+.+.   .+++..+..++.||+.||.||
T Consensus        61 ----------~~i~~~~~~~~~-------------~~~~~~v~e~~~~~~L~~~~~~~~~l~~~~~~~~~~qil~~l~~l  117 (290)
T cd05580          61 ----------PFLVNLYGSFQD-------------DSNLYLVMEYVPGGELFSHLRKSGRFPEPVARFYAAQVVLALEYL  117 (290)
T ss_pred             ----------CCccceeeEEEc-------------CCeEEEEEecCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHH
Confidence                      999999998865             558999999999998876653   489999999999999999999


Q ss_pred             HhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecCC--cEEEeecCCCccccCCC-CC
Q psy9184         413 EVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVGE--KICYYDLSQDEELFEGE-GD  489 (562)
Q Consensus       413 H~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~~--g~v~~~l~~~pelF~g~-~~  489 (562)
                      |+ .||+||||+|.|||++.++                    .++|+|||+++.....  ....+..|++||.+.+. .+
T Consensus       118 H~-~~i~H~dl~p~nili~~~~--------------------~~kl~dfg~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~  176 (290)
T cd05580         118 HS-LDIVYRDLKPENLLLDSDG--------------------YIKITDFGFAKRVKGRTYTLCGTPEYLAPEIILSKGYG  176 (290)
T ss_pred             HH-CCEecCCCCHHHEEECCCC--------------------CEEEeeCCCccccCCCCCCCCCCccccChhhhcCCCCC
Confidence            99 7999999999999999886                    7999999999876543  12235568899988764 34


Q ss_pred             cHHHHHHHhhcccCCCCCCCCCCChhhhHHHHHHHHhhcccCCCCCCCchhHHHHHHHHHHHhcCCCcCcCC
Q psy9184         490 YQFDMYRMMRKQCQNNWQNFTPKNNVFWIHYLVDKATCLKKGYQYLRAPRHQAFELLEELGQNALHFDSCYE  561 (562)
Q Consensus       490 ~q~dIy~lm~~~~~~~W~~~~P~tn~~wl~yl~~~Ll~~~~~~~~~~~~~~~~~~~l~~l~~~~l~~~s~~~  561 (562)
                      ...|||++. ......+.+..|+.+..+... ..........++..-      -..+.+|.+.+|+.+...|
T Consensus       177 ~~~Di~slG-~il~~l~~g~~p~~~~~~~~~-~~~~~~~~~~~~~~~------~~~l~~li~~~l~~~p~~R  240 (290)
T cd05580         177 KAVDWWALG-ILIYEMLAGYPPFFDDNPIQI-YEKILEGKVRFPSFF------SPDAKDLIRNLLQVDLTKR  240 (290)
T ss_pred             ccccHHHHH-HHHHHHHhCCCCCCCCCHHHH-HHHHhcCCccCCccC------CHHHHHHHHHHccCCHHHc
Confidence            558998863 333344455556543332221 122222111222111      2355566677776554443

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi

>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4

Probab=99.91  E-value=9.1e-24  Score=213.72  Aligned_cols=179  Identities=18%  Similarity=0.240  Sum_probs=135.9

Q ss_pred             CCceeeeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCcccccc
Q psy9184         262 ALKNCKKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTELL  335 (562)
Q Consensus       262 ~y~~~~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~l~  335 (562)
                      +|++.+.||+|+||.||+|      +.||+|++......      ......+.+|+.+++.+.++.              
T Consensus         1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~------~~~~~~~~~e~~~l~~l~~~~--------------   60 (288)
T cd07863           1 QYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVQTNE------DGLPLSTVREVALLKRLEAFD--------------   60 (288)
T ss_pred             CceEeeEEeecCCeEEEEEEECCCCcEEEEEEeccCcCC------CCCchHHHHHHHHHHHhhhcC--------------
Confidence            4788999999999999999      68999998864311      111134567888777764211              


Q ss_pred             cccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc-----cCCHHHHHHHHHHHHHHHH
Q psy9184         336 KCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK-----YRSPNQTYAMILQVVFSLA  410 (562)
Q Consensus       336 ~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~-----~l~e~~i~~I~~QIl~aL~  410 (562)
                               ||||+++++++....        ......++++||++.+ ++...+.     .+++.+++.++.||+.||.
T Consensus        61 ---------h~ni~~~~~~~~~~~--------~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~qi~~al~  122 (288)
T cd07863          61 ---------HPNIVRLMDVCATSR--------TDRETKVTLVFEHVDQ-DLRTYLDKVPPPGLPAETIKDLMRQFLRGLD  122 (288)
T ss_pred             ---------CCCeeeeeeeecccc--------CCCCceEEEEEccccc-CHHHHHHhcCCCCCCHHHHHHHHHHHHHHHH
Confidence                     399999998876421        1124578999999984 4544442     2789999999999999999


Q ss_pred             HHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecC----CcEEEeecCCCccccCC
Q psy9184         411 VAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVG----EKICYYDLSQDEELFEG  486 (562)
Q Consensus       411 yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~----~g~v~~~l~~~pelF~g  486 (562)
                      |||+ .||+||||||+|||++.++                    .+||+|||+++....    .....+..|++||++.+
T Consensus       123 ~lH~-~~ivH~dikp~Nili~~~~--------------------~~kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~  181 (288)
T cd07863         123 FLHA-NCIVHRDLKPENILVTSGG--------------------QVKLADFGLARIYSCQMALTPVVVTLWYRAPEVLLQ  181 (288)
T ss_pred             HHHh-CCeecCCCCHHHEEECCCC--------------------CEEECccCccccccCcccCCCccccccccCchHhhC
Confidence            9999 7999999999999998886                    799999999987643    22345677999998866


Q ss_pred             -CCCcHHHHHHHhh
Q psy9184         487 -EGDYQFDMYRMMR  499 (562)
Q Consensus       487 -~~~~q~dIy~lm~  499 (562)
                       ..+...|||++.-
T Consensus       182 ~~~~~~~DiwslG~  195 (288)
T cd07863         182 STYATPVDMWSVGC  195 (288)
T ss_pred             CCCCCcchhhhHHH
Confidence             3456689988643

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou

>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2

Probab=99.91  E-value=4.3e-24  Score=223.73  Aligned_cols=175  Identities=21%  Similarity=0.280  Sum_probs=137.9

Q ss_pred             CCCCCCceeeeeeccCceEEEEE-----------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCC
Q psy9184         258 YPSSALKNCKKIGEGVYGEVFKL-----------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTEN  326 (562)
Q Consensus       258 ~~~~~y~~~~~LG~GsfG~Vyka-----------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n  326 (562)
                      |+.++|++.+.||+|+||.||+|           +.||||+++...       .......+.+|+.+++.+.|       
T Consensus         4 ~~~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~-------~~~~~~~~~~E~~~l~~l~~-------   69 (343)
T cd05103           4 FPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGA-------THSEHRALMSELKILIHIGH-------   69 (343)
T ss_pred             cchhHhcccccccCCccceEEEEeeccCCccccceeEEEEEeccCC-------ChHHHHHHHHHHHHHHhccC-------
Confidence            45678999999999999999998           579999997542       12334678899999999976       


Q ss_pred             CCCcccccccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc---------------
Q psy9184         327 STPCFTELLKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK---------------  391 (562)
Q Consensus       327 ~~p~fv~l~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~---------------  391 (562)
                                        ||||+++++.+..            .+..++++||||++|++.+.+.               
T Consensus        70 ------------------h~niv~~~~~~~~------------~~~~~~lv~ey~~~g~L~~~i~~~~~~~~~~~~~~~~  119 (343)
T cd05103          70 ------------------HLNVVNLLGACTK------------PGGPLMVIVEFCKFGNLSNYLRSKRGEFVPYKTKDAR  119 (343)
T ss_pred             ------------------CccHhhhcceeec------------CCCceEEEEeccCCCcHHHHHHhcCCccccccccccc
Confidence                              5999999987754            1346899999999998754431               


Q ss_pred             -------------------------------------------------------cCCHHHHHHHHHHHHHHHHHHHhhC
Q psy9184         392 -------------------------------------------------------YRSPNQTYAMILQVVFSLAVAEVEL  416 (562)
Q Consensus       392 -------------------------------------------------------~l~e~~i~~I~~QIl~aL~yLH~~~  416 (562)
                                                                             .+++.++..++.||+.||+|||+ .
T Consensus       120 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~-~  198 (343)
T cd05103         120 FRQGKSGYGDISEDLKRRLDSITSSQSSASSGFVEEKSLSDVEEEEAEQEDLYKKVLTLEDLICYSFQVAKGMEFLAS-R  198 (343)
T ss_pred             cccccccccchhhhhhhhccccccccccccccccCCCccccchhhhhhhhhhhhccCCHHHHHHHHHHHHHHHHHHHh-C
Confidence                                                                   15677888999999999999999 7


Q ss_pred             CeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecCC-------cEEEeecCCCccccCC-CC
Q psy9184         417 EFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVGE-------KICYYDLSQDEELFEG-EG  488 (562)
Q Consensus       417 ~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~~-------g~v~~~l~~~pelF~g-~~  488 (562)
                      +|+||||||+|||++.++                    .++|+|||+++.....       ....+..|++||.+.+ ..
T Consensus       199 ~i~H~dikp~Nil~~~~~--------------------~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~  258 (343)
T cd05103         199 KCIHRDLAARNILLSENN--------------------VVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVY  258 (343)
T ss_pred             CeecCCCccCeEEEcCCC--------------------cEEEEecccccccccCcchhhcCCCCCCcceECcHHhcCCCC
Confidence            999999999999998776                    7999999999865321       1122334788987655 45


Q ss_pred             CcHHHHHHH
Q psy9184         489 DYQFDMYRM  497 (562)
Q Consensus       489 ~~q~dIy~l  497 (562)
                      ..+.|||++
T Consensus       259 ~~~~Di~sl  267 (343)
T cd05103         259 TIQSDVWSF  267 (343)
T ss_pred             CchhhHHHH
Confidence            566888875

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp

>PHA02988 hypothetical protein; Provisional

Probab=99.91  E-value=3.7e-24  Score=218.36  Aligned_cols=229  Identities=12%  Similarity=0.054  Sum_probs=164.2

Q ss_pred             eeeeccCceEEEEE----eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCcccccccccccCC
Q psy9184         267 KKIGEGVYGEVFKL----NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTELLKCSCVRG  342 (562)
Q Consensus       267 ~~LG~GsfG~Vyka----~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~l~~~~iv~g  342 (562)
                      ..||+|++|.||+|    +.||||.+....     .......+.+.+|+.+|++++|                       
T Consensus        26 ~~i~~g~~~~v~~~~~~~~~vavK~~~~~~-----~~~~~~~~~~~~E~~~l~~l~h-----------------------   77 (283)
T PHA02988         26 VLIKENDQNSIYKGIFNNKEVIIRTFKKFH-----KGHKVLIDITENEIKNLRRIDS-----------------------   77 (283)
T ss_pred             eEEeeCCceEEEEEEECCEEEEEEeccccc-----cccHHHHHHHHHHHHHHHhcCC-----------------------
Confidence            78999999999999    899999998653     2223335678899999999998                       


Q ss_pred             CCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc---cCCHHHHHHHHHHHHHHHHHHHhhCCeE
Q psy9184         343 RYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK---YRSPNQTYAMILQVVFSLAVAEVELEFE  419 (562)
Q Consensus       343 ~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~---~l~e~~i~~I~~QIl~aL~yLH~~~~Ii  419 (562)
                         |||+++++++.+..         .....+++||||++||++.+.+.   .+++.....++.|++.||.|||+..+++
T Consensus        78 ---~nIv~~~g~~~~~~---------~~~~~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~  145 (283)
T PHA02988         78 ---NNILKIYGFIIDIV---------DDLPRLSLILEYCTRGYLREVLDKEKDLSFKTKLDMAIDCCKGLYNLYKYTNKP  145 (283)
T ss_pred             ---CCEEEEeeeEEecc---------cCCCceEEEEEeCCCCcHHHHHhhCCCCChhHHHHHHHHHHHHHHHHHhcCCCC
Confidence               89999998876410         01346899999999998877664   3888999999999999999999845899


Q ss_pred             eccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecC--CcEEEeecCCCccccCC---CCCcHHHH
Q psy9184         420 HRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVG--EKICYYDLSQDEELFEG---EGDYQFDM  494 (562)
Q Consensus       420 HRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~--~g~v~~~l~~~pelF~g---~~~~q~dI  494 (562)
                      ||||||+|||++.++                    .+||+|||+++....  ...+.+..|++||++.+   ..+.+.||
T Consensus       146 Hrdlkp~nill~~~~--------------------~~kl~dfg~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~k~Di  205 (283)
T PHA02988        146 YKNLTSVSFLVTENY--------------------KLKIICHGLEKILSSPPFKNVNFMVYFSYKMLNDIFSEYTIKDDI  205 (283)
T ss_pred             CCcCChhhEEECCCC--------------------cEEEcccchHhhhccccccccCcccccCHHHhhhccccccchhhh
Confidence            999999999999886                    799999999986443  22344567899999875   45667999


Q ss_pred             HHHhhcccCCCCCCCCCCChhhhHHHHHHHHhhcccCCCCCCCchhHHHHHHHHHHHhcCCCcCcCC
Q psy9184         495 YRMMRKQCQNNWQNFTPKNNVFWIHYLVDKATCLKKGYQYLRAPRHQAFELLEELGQNALHFDSCYE  561 (562)
Q Consensus       495 y~lm~~~~~~~W~~~~P~tn~~wl~yl~~~Ll~~~~~~~~~~~~~~~~~~~l~~l~~~~l~~~s~~~  561 (562)
                      |++ |......+.+..|+.+.. ...+..........++.+.    ..-..+.+|.+.+++.+...|
T Consensus       206 ~Sl-Gvil~el~~g~~Pf~~~~-~~~~~~~i~~~~~~~~~~~----~~~~~l~~li~~cl~~dp~~R  266 (283)
T PHA02988        206 YSL-GVVLWEIFTGKIPFENLT-TKEIYDLIINKNNSLKLPL----DCPLEIKCIVEACTSHDSIKR  266 (283)
T ss_pred             hHH-HHHHHHHHHCCCCCCCCC-HHHHHHHHHhcCCCCCCCC----cCcHHHHHHHHHHhcCCcccC
Confidence            875 444444555666664432 1112222222122222211    113356777777877776554

>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=99.91  E-value=9.3e-24  Score=210.28  Aligned_cols=232  Identities=16%  Similarity=0.197  Sum_probs=165.3

Q ss_pred             CCCceeeeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCccccc
Q psy9184         261 SALKNCKKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTEL  334 (562)
Q Consensus       261 ~~y~~~~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~l  334 (562)
                      +.|++.+.||+|+||.||+|      ..+|+|.+......   .........+.+|+.+++.++|               
T Consensus         2 ~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~lk~~~~~~~~---~~~~~~~~~~~~e~~~l~~l~~---------------   63 (263)
T cd06625           2 TNWRRGKLLGQGAFGRVYLCYDVDTGRELAVKQVPFDPDS---PETKKEVNALECEIQLLKNLQH---------------   63 (263)
T ss_pred             CcccccceecCCCceEEEEEEEcCCCcEEEEEEEeecccc---hhhHHHHHHHHHHHHHHHhCCC---------------
Confidence            46889999999999999999      78999998764311   1223345678899999999998               


Q ss_pred             ccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc---cCCHHHHHHHHHHHHHHHHH
Q psy9184         335 LKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK---YRSPNQTYAMILQVVFSLAV  411 (562)
Q Consensus       335 ~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~---~l~e~~i~~I~~QIl~aL~y  411 (562)
                                 |||+++++++..             ++.+|++|||++||++.+.+.   .+++..+..++.|++.||.|
T Consensus        64 -----------~~i~~~~~~~~~-------------~~~~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~  119 (263)
T cd06625          64 -----------ERIVQYYGCLRD-------------DETLSIFMEYMPGGSVKDQLKAYGALTETVTRKYTRQILEGVEY  119 (263)
T ss_pred             -----------CCeeeeEEEEcc-------------CCeEEEEEEECCCCcHHHHHHHhCCCCHHHHHHHHHHHHHHHHH
Confidence                       999999999875             458999999999997766554   47899999999999999999


Q ss_pred             HHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecCC--------cEEEeecCCCccc
Q psy9184         412 AEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVGE--------KICYYDLSQDEEL  483 (562)
Q Consensus       412 LH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~~--------g~v~~~l~~~pel  483 (562)
                      ||+ .||+||||||+||+++.++                    .++|+|||+++.....        .......|.+||+
T Consensus       120 lH~-~~i~H~dl~p~nilv~~~~--------------------~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~  178 (263)
T cd06625         120 LHS-NMIVHRDIKGANILRDSAG--------------------NVKLGDFGASKRLQTICSSGTGMKSVTGTPYWMSPEV  178 (263)
T ss_pred             HHh-CCeecCCCCHHHEEEcCCC--------------------CEEEeecccceeccccccccccccCCCcCccccCcce
Confidence            999 7999999999999998876                    7999999999865431        1223457889998


Q ss_pred             cCCC-CCcHHHHHHHhhcccCCCCCCCCCCChhhhHHHHHHHHhhcccCCCCCCCchhHHHHHHHHHHHhcCCCcCcCC
Q psy9184         484 FEGE-GDYQFDMYRMMRKQCQNNWQNFTPKNNVFWIHYLVDKATCLKKGYQYLRAPRHQAFELLEELGQNALHFDSCYE  561 (562)
Q Consensus       484 F~g~-~~~q~dIy~lm~~~~~~~W~~~~P~tn~~wl~yl~~~Ll~~~~~~~~~~~~~~~~~~~l~~l~~~~l~~~s~~~  561 (562)
                      +.+. .+...|||++.- .....+.+..|+.+......+.. .........-    ....-..+.+|.+.+|..+...|
T Consensus       179 ~~~~~~~~~~Di~slG~-il~el~~g~~p~~~~~~~~~~~~-~~~~~~~~~~----~~~~~~~~~~li~~~l~~~p~~R  251 (263)
T cd06625         179 ISGEGYGRKADVWSVGC-TVVEMLTEKPPWAEFEAMAAIFK-IATQPTNPQL----PSHVSPDARNFLRRTFVENAKKR  251 (263)
T ss_pred             eccCCCCchhhhHHHHH-HHHHHHhCCCCccccchHHHHHH-HhccCCCCCC----CccCCHHHHHHHHHHhhcCcccC
Confidence            8764 456689987533 33334445555543322222211 1110111111    11124466777788887765544

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t

>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5

Probab=99.91  E-value=9.2e-24  Score=214.84  Aligned_cols=184  Identities=15%  Similarity=0.137  Sum_probs=143.5

Q ss_pred             CceeeeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCccccccc
Q psy9184         263 LKNCKKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTELLK  336 (562)
Q Consensus       263 y~~~~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~l~~  336 (562)
                      |+..+.||+|+||+||+|      +.+|+|++....     .........+.+|+.+++.++|                 
T Consensus         2 ~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~-----~~~~~~~~~~~~E~~il~~l~~-----------------   59 (285)
T cd05632           2 FRQYRVLGKGGFGEVCACQVRATGKMYACKRLEKKR-----IKKRKGESMALNEKQILEKVNS-----------------   59 (285)
T ss_pred             ceEEEEEecCCCeEEEEEEECCCCcEEEEEEeehhh-----hhhhhHHHHHHHHHHHHHHcCC-----------------
Confidence            677899999999999999      789999987642     1122333567889999999998                 


Q ss_pred             ccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc-----cCCHHHHHHHHHHHHHHHHH
Q psy9184         337 CSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK-----YRSPNQTYAMILQVVFSLAV  411 (562)
Q Consensus       337 ~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~-----~l~e~~i~~I~~QIl~aL~y  411 (562)
                               ++++.+++.|..             ++..|++|||+.+|++.+.+.     .+++..+..++.|++.||.|
T Consensus        60 ---------~~i~~~~~~~~~-------------~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~  117 (285)
T cd05632          60 ---------QFVVNLAYAYET-------------KDALCLVLTIMNGGDLKFHIYNMGNPGFEEERALFYAAEILCGLED  117 (285)
T ss_pred             ---------cCceeEEEEEec-------------CCEEEEEEEeccCccHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHH
Confidence                     999999888764             568999999999987755442     38899999999999999999


Q ss_pred             HHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecC----CcEEEeecCCCccccCC-
Q psy9184         412 AEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVG----EKICYYDLSQDEELFEG-  486 (562)
Q Consensus       412 LH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~----~g~v~~~l~~~pelF~g-  486 (562)
                      ||+ .+|+||||||+|||++.++                    .++|+|||+++....    ....++..|++||...+ 
T Consensus       118 lH~-~~iiH~dikp~Nili~~~~--------------------~~kl~Dfg~~~~~~~~~~~~~~~g~~~~~aPE~~~~~  176 (285)
T cd05632         118 LHR-ENTVYRDLKPENILLDDYG--------------------HIRISDLGLAVKIPEGESIRGRVGTVGYMAPEVLNNQ  176 (285)
T ss_pred             HHh-CCeeecCCCHHHEEECCCC--------------------CEEEecCCcceecCCCCcccCCCCCcCccChHHhcCC
Confidence            999 7999999999999998876                    799999999976532    23345677889998765 


Q ss_pred             CCCcHHHHHHHhhcccCCCCCCCCCC
Q psy9184         487 EGDYQFDMYRMMRKQCQNNWQNFTPK  512 (562)
Q Consensus       487 ~~~~q~dIy~lm~~~~~~~W~~~~P~  512 (562)
                      ..+...|+|++. ......+.+..|+
T Consensus       177 ~~~~~~Di~slG-~~l~~l~~g~~P~  201 (285)
T cd05632         177 RYTLSPDYWGLG-CLIYEMIEGQSPF  201 (285)
T ss_pred             CCCcccchHHHH-HHHHHHHhCCCCC
Confidence            345558888763 3333334444554

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with

>KOG0612|consensus

Probab=99.91  E-value=2.1e-25  Score=252.31  Aligned_cols=190  Identities=16%  Similarity=0.201  Sum_probs=157.9

Q ss_pred             CCCCCCceeeeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCcc
Q psy9184         258 YPSSALKNCKKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCF  331 (562)
Q Consensus       258 ~~~~~y~~~~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~f  331 (562)
                      ...++|.++++||+|+||+|.++      +.||+|++.+-.     .........|..|-.||..-+.            
T Consensus        72 l~~~DfeilKvIGrGaFGEV~lVr~k~t~~VYAMK~lnK~e-----MlKr~~tA~F~EERDimv~~ns------------  134 (1317)
T KOG0612|consen   72 LKAEDFEILKVIGRGAFGEVALVRHKSTEKVYAMKILNKWE-----MLKRAETACFREERDIMVFGNS------------  134 (1317)
T ss_pred             CCHHhhHHHHHhcccccceeEEEEeeccccchhHHHhhHHH-----HhhchhHHHHHHHhHHHHcCCc------------
Confidence            34588999999999999999999      899999998621     1112223456778888888776            


Q ss_pred             cccccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc---cCCHHHHHHHHHHHHHH
Q psy9184         332 TELLKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK---YRSPNQTYAMILQVVFS  408 (562)
Q Consensus       332 v~l~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~---~l~e~~i~~I~~QIl~a  408 (562)
                                    +.|+.++..|++             +..+|+||||++||+++..+.   .+|++-+++++..|+.|
T Consensus       135 --------------~Wiv~LhyAFQD-------------~~~LYlVMdY~pGGDlltLlSk~~~~pE~~ArFY~aEiVlA  187 (1317)
T KOG0612|consen  135 --------------EWIVQLHYAFQD-------------ERYLYLVMDYMPGGDLLTLLSKFDRLPEDWARFYTAEIVLA  187 (1317)
T ss_pred             --------------HHHHHHHHHhcC-------------ccceEEEEecccCchHHHHHhhcCCChHHHHHHHHHHHHHH
Confidence                          999999999997             669999999999998876664   48899999999999999


Q ss_pred             HHHHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecCCc------EEEeecCCCcc
Q psy9184         409 LAVAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVGEK------ICYYDLSQDEE  482 (562)
Q Consensus       409 L~yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~~g------~v~~~l~~~pe  482 (562)
                      |+-||+ +|+|||||||+||||+..|                    ++||+|||.+-.....|      .++|+=|..||
T Consensus       188 ldslH~-mgyVHRDiKPDNvLld~~G--------------------HikLADFGsClkm~~dG~V~s~~aVGTPDYISPE  246 (1317)
T KOG0612|consen  188 LDSLHS-MGYVHRDIKPDNVLLDKSG--------------------HIKLADFGSCLKMDADGTVRSSVAVGTPDYISPE  246 (1317)
T ss_pred             HHHHHh-ccceeccCCcceeEecccC--------------------cEeeccchhHHhcCCCCcEEeccccCCCCccCHH
Confidence            999999 9999999999999999998                    89999999998887655      45688999999


Q ss_pred             ccCCCC----CcH--HHHHHHhhcccCCCCCCCCCCC
Q psy9184         483 LFEGEG----DYQ--FDMYRMMRKQCQNNWQNFTPKN  513 (562)
Q Consensus       483 lF~g~~----~~q--~dIy~lm~~~~~~~W~~~~P~t  513 (562)
                      ++.+.+    .|.  +|. |.+|...+++.-+-.||-
T Consensus       247 vLqs~~~~~g~yG~ecDw-WSlGV~~YEMlyG~TPFY  282 (1317)
T KOG0612|consen  247 VLQSQGDGKGEYGRECDW-WSLGVFMYEMLYGETPFY  282 (1317)
T ss_pred             HHHhhcCCccccCCccch-hhhHHHHHHHHcCCCcch
Confidence            987633    233  554 567888888888888883

>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor

Probab=99.91  E-value=1.2e-23  Score=217.12  Aligned_cols=172  Identities=20%  Similarity=0.182  Sum_probs=138.1

Q ss_pred             CCCCCceeeeeeccCceEEEEE----------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCC
Q psy9184         259 PSSALKNCKKIGEGVYGEVFKL----------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENST  328 (562)
Q Consensus       259 ~~~~y~~~~~LG~GsfG~Vyka----------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~  328 (562)
                      ...+|+..+.||+|+||.||+|          ..||+|++....       .....+.+.+|+.+++.++|         
T Consensus         5 ~~~~f~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~-------~~~~~~~~~~e~~~l~~l~h---------   68 (316)
T cd05108           5 KETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREAT-------SPKANKEILDEAYVMASVDN---------   68 (316)
T ss_pred             chhhceeeeeeecCCCceEEEEEEecCCCccceeEEEEeccccC-------CHHHHHHHHHHHHHHHhCCC---------
Confidence            4467999999999999999998          238999987432       23344678899999999998         


Q ss_pred             CcccccccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc----cCCHHHHHHHHHH
Q psy9184         329 PCFTELLKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK----YRSPNQTYAMILQ  404 (562)
Q Consensus       329 p~fv~l~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~----~l~e~~i~~I~~Q  404 (562)
                                       |||+++++++..              ...++++||+.+|++.+.+.    .+++..+..++.|
T Consensus        69 -----------------~niv~~~g~~~~--------------~~~~~v~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~q  117 (316)
T cd05108          69 -----------------PHVCRLLGICLT--------------STVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ  117 (316)
T ss_pred             -----------------CCCCeEEEEEcC--------------CCceeeeecCCCCCHHHHHHhccccCCHHHHHHHHHH
Confidence                             999999887753              35689999999998887664    3788899999999


Q ss_pred             HHHHHHHHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecCCc-------EEEeec
Q psy9184         405 VVFSLAVAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVGEK-------ICYYDL  477 (562)
Q Consensus       405 Il~aL~yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~~g-------~v~~~l  477 (562)
                      |+.||+|||+ .+|+||||||+|||++.++                    .+||+|||+++......       ...+..
T Consensus       118 i~~~L~~LH~-~~iiH~dlkp~Nill~~~~--------------------~~kl~DfG~a~~~~~~~~~~~~~~~~~~~~  176 (316)
T cd05108         118 IAKGMNYLEE-RRLVHRDLAARNVLVKTPQ--------------------HVKITDFGLAKLLGADEKEYHAEGGKVPIK  176 (316)
T ss_pred             HHHHHHHHHh-cCeeccccchhheEecCCC--------------------cEEEccccccccccCCCcceeccCCcccee
Confidence            9999999999 7999999999999998876                    79999999999765321       112345


Q ss_pred             CCCccccCC-CCCcHHHHHHHh
Q psy9184         478 SQDEELFEG-EGDYQFDMYRMM  498 (562)
Q Consensus       478 ~~~pelF~g-~~~~q~dIy~lm  498 (562)
                      |++||.+.+ ..+...|||+..
T Consensus       177 y~apE~~~~~~~~~~~Di~slG  198 (316)
T cd05108         177 WMALESILHRIYTHQSDVWSYG  198 (316)
T ss_pred             ecChHHhccCCCCchhhhHHHH
Confidence            788987765 455668888753

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor

>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3

Probab=99.91  E-value=4.2e-24  Score=213.84  Aligned_cols=174  Identities=21%  Similarity=0.335  Sum_probs=142.7

Q ss_pred             CCCCCCceeeeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCcc
Q psy9184         258 YPSSALKNCKKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCF  331 (562)
Q Consensus       258 ~~~~~y~~~~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~f  331 (562)
                      .+.++|++.+.||+|+||.||+|      +.||+|+++...        ......+.+|+.+++.++|            
T Consensus         6 ~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~--------~~~~~~~~~e~~~~~~l~h------------   65 (267)
T cd06645           6 NPQEDFELIQRIGSGTYGDVYKARNVNTGELAAIKVIKLEP--------GEDFAVVQQEIIMMKDCKH------------   65 (267)
T ss_pred             CcHHHHHHHHHhCCCCCeEEEEEEEcCCCcEEEEEEEecCc--------hhHHHHHHHHHHHHHhCCC------------
Confidence            34467899999999999999999      799999988653        2233567789999999998            


Q ss_pred             cccccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc---cCCHHHHHHHHHHHHHH
Q psy9184         332 TELLKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK---YRSPNQTYAMILQVVFS  408 (562)
Q Consensus       332 v~l~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~---~l~e~~i~~I~~QIl~a  408 (562)
                                    |||+++++.+..             .+.+|+||||+.+|++.+.+.   .+++.++..++.|++.|
T Consensus        66 --------------~~ii~~~~~~~~-------------~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~i~~~  118 (267)
T cd06645          66 --------------SNIVAYFGSYLR-------------RDKLWICMEFCGGGSLQDIYHVTGPLSESQIAYVSRETLQG  118 (267)
T ss_pred             --------------CCeeeEEEEEEe-------------CCEEEEEEeccCCCcHHHHHHhcCCCCHHHHHHHHHHHHHH
Confidence                          999999988865             558999999999988776553   48999999999999999


Q ss_pred             HHHHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecC-----CcEEEeecCCCccc
Q psy9184         409 LAVAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVG-----EKICYYDLSQDEEL  483 (562)
Q Consensus       409 L~yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~-----~g~v~~~l~~~pel  483 (562)
                      |.|||+ .||+||||||+||+++.++                    .++|+|||++.....     ....++..|++||.
T Consensus       119 l~~lH~-~~i~H~dlkp~nili~~~~--------------------~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~  177 (267)
T cd06645         119 LYYLHS-KGKMHRDIKGANILLTDNG--------------------HVKLADFGVSAQITATIAKRKSFIGTPYWMAPEV  177 (267)
T ss_pred             HHHHHH-CCeecCCCCHHHEEECCCC--------------------CEEECcceeeeEccCcccccccccCcccccChhh
Confidence            999999 7999999999999998876                    699999999876543     12244667899998


Q ss_pred             cC----CCCCcHHHHHHHhh
Q psy9184         484 FE----GEGDYQFDMYRMMR  499 (562)
Q Consensus       484 F~----g~~~~q~dIy~lm~  499 (562)
                      +.    +..+...|+|+++-
T Consensus       178 ~~~~~~~~~~~~~DvwSlG~  197 (267)
T cd06645         178 AAVERKGGYNQLCDIWAVGI  197 (267)
T ss_pred             hccccCCCCCchhhhHHHHH
Confidence            74    23455689988643

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10

Probab=99.91  E-value=9.2e-24  Score=212.27  Aligned_cols=171  Identities=15%  Similarity=0.145  Sum_probs=138.1

Q ss_pred             CCCceeeeeeccCceEEEEE---------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCcc
Q psy9184         261 SALKNCKKIGEGVYGEVFKL---------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCF  331 (562)
Q Consensus       261 ~~y~~~~~LG~GsfG~Vyka---------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~f  331 (562)
                      .+|++.+.||+|+||.||+|         ..||+|.++...       .......+.+|+.+++.++|            
T Consensus         5 ~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vaik~~~~~~-------~~~~~~~~~~e~~~l~~l~h------------   65 (266)
T cd05064           5 KSIKIERILGTGRFGELCRGCLKLPSKRELPVAIHTLRAGC-------SDKQRRGFLAEALTLGQFDH------------   65 (266)
T ss_pred             HHeEEeeeecccCCCeEEEEEEecCCCceeeEEEEecCCCC-------CHHHHHHHHHHHHHHhcCCC------------
Confidence            56899999999999999998         589999988642       12334578899999999988            


Q ss_pred             cccccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc----cCCHHHHHHHHHHHHH
Q psy9184         332 TELLKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK----YRSPNQTYAMILQVVF  407 (562)
Q Consensus       332 v~l~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~----~l~e~~i~~I~~QIl~  407 (562)
                                    |||+++++.+..             ++..|+||||+.+|++.+.+.    .+++.+++.++.||+.
T Consensus        66 --------------~~iv~~~~~~~~-------------~~~~~lv~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~i~~  118 (266)
T cd05064          66 --------------SNIVRLEGVITR-------------GNTMMIVTEYMSNGALDSFLRKHEGQLVAGQLMGMLPGLAS  118 (266)
T ss_pred             --------------CCcCeEEEEEec-------------CCCcEEEEEeCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHH
Confidence                          999999988864             458999999999997755443    3789999999999999


Q ss_pred             HHHHHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecCCc------EEEeecCCCc
Q psy9184         408 SLAVAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVGEK------ICYYDLSQDE  481 (562)
Q Consensus       408 aL~yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~~g------~v~~~l~~~p  481 (562)
                      ||+|||+ .+++||||||+|||++.++                    .++|+|||++.......      ...+..|++|
T Consensus       119 al~~lH~-~~iiH~dikp~nili~~~~--------------------~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~aP  177 (266)
T cd05064         119 GMKYLSE-MGYVHKGLAAHKVLVNSDL--------------------VCKISGFRRLQEDKSEAIYTTMSGKSPVLWAAP  177 (266)
T ss_pred             HHHHHHH-CCEeeccccHhhEEEcCCC--------------------cEEECCCcccccccccchhcccCCCCceeecCH
Confidence            9999999 7999999999999998876                    79999999876543211      1123467899


Q ss_pred             cccCC-CCCcHHHHHHHh
Q psy9184         482 ELFEG-EGDYQFDMYRMM  498 (562)
Q Consensus       482 elF~g-~~~~q~dIy~lm  498 (562)
                      |.+.+ ..+...|||+..
T Consensus       178 E~~~~~~~~~~~Di~slG  195 (266)
T cd05064         178 EAIQYHHFSSASDVWSFG  195 (266)
T ss_pred             HHHhhCCccchhHHHHHH
Confidence            98765 455668998854

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor

>KOG0690|consensus

Probab=99.91  E-value=1.1e-24  Score=219.24  Aligned_cols=215  Identities=17%  Similarity=0.138  Sum_probs=169.4

Q ss_pred             CCCCceeeeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCcccc
Q psy9184         260 SSALKNCKKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTE  333 (562)
Q Consensus       260 ~~~y~~~~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~  333 (562)
                      .++|..+++||+|.||.|.+|      +.||||+++++-     ........+-+.|-++|+...|              
T Consensus       167 m~dFdfLKvLGkGTFGKVIL~rEKat~k~YAiKIlkKev-----iiakdEVAHTlTE~RVL~~~~H--------------  227 (516)
T KOG0690|consen  167 MEDFDFLKVLGKGTFGKVILCREKATGKLYAIKILKKEV-----IIAKDEVAHTLTENRVLQNCRH--------------  227 (516)
T ss_pred             cchhhHHHHhcCCccceEEEEeecccCceeehhhhhhhh-----eeehHHhhhhhhHHHHHHhccC--------------
Confidence            467889999999999999999      899999999864     3344555677889999999998              


Q ss_pred             cccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCcccccc---CCHHHHHHHHHHHHHHHH
Q psy9184         334 LLKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIKY---RSPNQTYAMILQVVFSLA  410 (562)
Q Consensus       334 l~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~~---l~e~~i~~I~~QIl~aL~  410 (562)
                                  |++..+-..|+.             .+++|+||||.+||.++.++.+   ++++.++.+-..|+.||.
T Consensus       228 ------------PFLt~LKYsFQt-------------~drlCFVMeyanGGeLf~HLsrer~FsE~RtRFYGaEIvsAL~  282 (516)
T KOG0690|consen  228 ------------PFLTSLKYSFQT-------------QDRLCFVMEYANGGELFFHLSRERVFSEDRTRFYGAEIVSALG  282 (516)
T ss_pred             ------------cHHHHhhhhhcc-------------CceEEEEEEEccCceEeeehhhhhcccchhhhhhhHHHHHHhh
Confidence                        999999888886             6799999999999999988864   999999999999999999


Q ss_pred             HHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecCCc-----EEEeecCCCccccC
Q psy9184         411 VAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVGEK-----ICYYDLSQDEELFE  485 (562)
Q Consensus       411 yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~~g-----~v~~~l~~~pelF~  485 (562)
                      |||+ .+||.||||.+|.|++.+|                    ++||+||||++.....|     .++++-|.+||+..
T Consensus       283 YLHs-~~ivYRDlKLENLlLDkDG--------------------HIKitDFGLCKE~I~~g~t~kTFCGTPEYLAPEVle  341 (516)
T KOG0690|consen  283 YLHS-RNIVYRDLKLENLLLDKDG--------------------HIKITDFGLCKEEIKYGDTTKTFCGTPEYLAPEVLE  341 (516)
T ss_pred             hhhh-CCeeeeechhhhheeccCC--------------------ceEeeecccchhcccccceeccccCChhhcCchhhc
Confidence            9999 6999999999999999998                    89999999999766533     45688888999887


Q ss_pred             CCCCcHHHHHHHhhcccCCCCCCCCCCChhhhHHHHHHHHhhcccCCCCCCCchh
Q psy9184         486 GEGDYQFDMYRMMRKQCQNNWQNFTPKNNVFWIHYLVDKATCLKKGYQYLRAPRH  540 (562)
Q Consensus       486 g~~~~q~dIy~lm~~~~~~~W~~~~P~tn~~wl~yl~~~Ll~~~~~~~~~~~~~~  540 (562)
                      ....-++.-|+..|...+++..+..|+.|.---....--|.. ..+|++.-++.+
T Consensus       342 DnDYgraVDWWG~GVVMYEMmCGRLPFyn~dh~kLFeLIl~e-d~kFPr~ls~eA  395 (516)
T KOG0690|consen  342 DNDYGRAVDWWGVGVVMYEMMCGRLPFYNKDHEKLFELILME-DLKFPRTLSPEA  395 (516)
T ss_pred             cccccceeehhhhhHHHHHHHhccCcccccchhHHHHHHHhh-hccCCccCCHHH
Confidence            643333444555666666666777777654311111112223 556666555433

>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7

Probab=99.91  E-value=5.2e-24  Score=215.82  Aligned_cols=165  Identities=16%  Similarity=0.210  Sum_probs=132.5

Q ss_pred             eeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCcccccccccccCC
Q psy9184         269 IGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTELLKCSCVRG  342 (562)
Q Consensus       269 LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~l~~~~iv~g  342 (562)
                      ||+|+||.||++      +.||+|.+.....     ........+..|+.+++.++|                       
T Consensus         1 lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~-----~~~~~~~~~~~E~~il~~l~h-----------------------   52 (277)
T cd05607           1 LGKGGFGEVCAVQVKNTGKMYACKKLDKKRL-----KKKSGEKMALLEKEILEKVNS-----------------------   52 (277)
T ss_pred             CCCCCceEEEEEEEccCCcEEEEEEEcHHHh-----hcchhhHHHHHHHHHHHhcCC-----------------------
Confidence            799999999998      7899999875321     111122345679999999988                       


Q ss_pred             CCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc-----cCCHHHHHHHHHHHHHHHHHHHhhCC
Q psy9184         343 RYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK-----YRSPNQTYAMILQVVFSLAVAEVELE  417 (562)
Q Consensus       343 ~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~-----~l~e~~i~~I~~QIl~aL~yLH~~~~  417 (562)
                         |||+++++.|..             +..+|+||||+.||++...+.     .+++..+..++.||+.||.|||+ .|
T Consensus        53 ---p~i~~~~~~~~~-------------~~~~~lv~e~~~g~~L~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~-~~  115 (277)
T cd05607          53 ---PFIVNLAYAFES-------------KTHLCLVMSLMNGGDLKYHIYNVGERGLEMERVIHYSAQITCGILHLHS-MD  115 (277)
T ss_pred             ---CcEEEEEEEEec-------------CCeEEEEEecCCCCCHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHH-CC
Confidence               999999988875             558999999999998765542     37888999999999999999999 79


Q ss_pred             eEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecCCc----EEEeecCCCccccCCC-CCcHH
Q psy9184         418 FEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVGEK----ICYYDLSQDEELFEGE-GDYQF  492 (562)
Q Consensus       418 IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~~g----~v~~~l~~~pelF~g~-~~~q~  492 (562)
                      |+||||||+|||++.++                    .++|+|||++.......    ..++..|++||.+.+. .+.+.
T Consensus       116 ivH~dikp~Nili~~~~--------------------~~~l~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~  175 (277)
T cd05607         116 IVYRDMKPENVLLDDQG--------------------NCRLSDLGLAVELKDGKTITQRAGTNGYMAPEILKEEPYSYPV  175 (277)
T ss_pred             EEEccCChHhEEEcCCC--------------------CEEEeeceeeeecCCCceeeccCCCCCccCHHHHccCCCCCch
Confidence            99999999999999876                    69999999998765422    2345678899988764 45568


Q ss_pred             HHHHHh
Q psy9184         493 DMYRMM  498 (562)
Q Consensus       493 dIy~lm  498 (562)
                      |+|++.
T Consensus       176 DvwslG  181 (277)
T cd05607         176 DWFAMG  181 (277)
T ss_pred             hHHHHH
Confidence            998864

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr

>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6

Probab=99.91  E-value=1.7e-23  Score=213.19  Aligned_cols=171  Identities=16%  Similarity=0.167  Sum_probs=138.4

Q ss_pred             CceeeeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCccccccc
Q psy9184         263 LKNCKKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTELLK  336 (562)
Q Consensus       263 y~~~~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~l~~  336 (562)
                      |+..+.||+|+||.||+|      +.||+|.+....     .........+.+|+.+++.++|                 
T Consensus         2 f~~~~~ig~G~~g~v~~~~~~~~~~~~avK~~~~~~-----~~~~~~~~~~~~E~~il~~l~~-----------------   59 (285)
T cd05630           2 FRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKR-----IKKRKGESMALNEKQILEKVNS-----------------   59 (285)
T ss_pred             ceeeEEeecCCCeEEEEEEEcCCCceEEEEEEehhh-----ccchHHHHHHHHHHHHHHhCCC-----------------
Confidence            677899999999999999      689999987643     1122233457789999999998                 


Q ss_pred             ccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc-----cCCHHHHHHHHHHHHHHHHH
Q psy9184         337 CSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK-----YRSPNQTYAMILQVVFSLAV  411 (562)
Q Consensus       337 ~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~-----~l~e~~i~~I~~QIl~aL~y  411 (562)
                               ++++.+++.+.+             ++.+|+||||+.||++.+.+.     .+++.++..++.|++.||.|
T Consensus        60 ---------~~i~~~~~~~~~-------------~~~~~lv~e~~~g~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~  117 (285)
T cd05630          60 ---------RFVVSLAYAYET-------------KDALCLVLTLMNGGDLKFHIYHMGEAGFEEGRAVFYAAEICCGLED  117 (285)
T ss_pred             ---------CCeeeeeEEEec-------------CCEEEEEEEecCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHH
Confidence                     999999888865             558999999999997765542     38899999999999999999


Q ss_pred             HHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecCC----cEEEeecCCCccccCC-
Q psy9184         412 AEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVGE----KICYYDLSQDEELFEG-  486 (562)
Q Consensus       412 LH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~~----g~v~~~l~~~pelF~g-  486 (562)
                      ||+ .+|+||||||+|||++.++                    .++|+|||++......    +..++..|++||.+.+ 
T Consensus       118 lH~-~~iiH~dikp~Nil~~~~~--------------------~~~l~Dfg~~~~~~~~~~~~~~~g~~~y~aPE~~~~~  176 (285)
T cd05630         118 LHQ-ERIVYRDLKPENILLDDHG--------------------HIRISDLGLAVHVPEGQTIKGRVGTVGYMAPEVVKNE  176 (285)
T ss_pred             HHh-CCEEeCCCCHHHEEECCCC--------------------CEEEeeccceeecCCCccccCCCCCccccChHHHcCC
Confidence            999 7999999999999999876                    6999999999865432    2345667889998866 


Q ss_pred             CCCcHHHHHHHh
Q psy9184         487 EGDYQFDMYRMM  498 (562)
Q Consensus       487 ~~~~q~dIy~lm  498 (562)
                      ..+.+.|||++.
T Consensus       177 ~~~~~~DiwslG  188 (285)
T cd05630         177 RYTFSPDWWALG  188 (285)
T ss_pred             CCCCccccHHHH
Confidence            345567887753

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as

>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors

Probab=99.91  E-value=1.2e-23  Score=212.27  Aligned_cols=228  Identities=18%  Similarity=0.145  Sum_probs=161.6

Q ss_pred             CCCCceeeeeeccCceEEEEE-----------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCC
Q psy9184         260 SSALKNCKKIGEGVYGEVFKL-----------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENST  328 (562)
Q Consensus       260 ~~~y~~~~~LG~GsfG~Vyka-----------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~  328 (562)
                      ..+|++.+.||+|+||.||+|           ..||+|.+....       .......+.+|+.+++.++|         
T Consensus         4 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~v~~K~~~~~~-------~~~~~~~~~~ei~~l~~l~h---------   67 (283)
T cd05048           4 LSAVRFLEELGEGAFGKVYKGELTGPNERLSATSVAIKTLKENA-------EPKVQQEFRQEAELMSDLQH---------   67 (283)
T ss_pred             hHHcchhhcccCccCCcEEEEEEecCCCCcceeeEEEEecccCC-------CHHHHHHHHHHHHHHHhcCC---------
Confidence            356889999999999999998           358999887542       23344678899999999998         


Q ss_pred             CcccccccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc-----------------
Q psy9184         329 PCFTELLKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK-----------------  391 (562)
Q Consensus       329 p~fv~l~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~-----------------  391 (562)
                                       |||+++++++..             ....|++|||+++|++.+.+.                 
T Consensus        68 -----------------~~i~~~~~~~~~-------------~~~~~~~~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~  117 (283)
T cd05048          68 -----------------PNIVCLLGVCTK-------------EQPTCMLFEYLAHGDLHEFLVRNSPHSDVGAESGDETV  117 (283)
T ss_pred             -----------------cccceEEEEEcC-------------CCceEEEEecCCCCcHHHHHHhcCCCcccccccccccc
Confidence                             999999988864             457899999999998765542                 


Q ss_pred             --cCCHHHHHHHHHHHHHHHHHHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecC
Q psy9184         392 --YRSPNQTYAMILQVVFSLAVAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVG  469 (562)
Q Consensus       392 --~l~e~~i~~I~~QIl~aL~yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~  469 (562)
                        .+++..+..++.||+.||.|||+ .+|+||||||+|||++.++                    .++|+|||+++....
T Consensus       118 ~~~l~~~~~~~~~~~l~~al~~lH~-~~i~H~dlkp~Nil~~~~~--------------------~~~L~dfg~~~~~~~  176 (283)
T cd05048         118 KSSLDCSDFLHIAIQIAAGMEYLSS-HHFVHRDLAARNCLVGEGL--------------------TVKISDFGLSRDIYS  176 (283)
T ss_pred             cCCCCHHHHHHHHHHHHHHHHHHHh-CCeeccccccceEEEcCCC--------------------cEEECCCcceeeccc
Confidence              26788899999999999999999 7999999999999998876                    799999999986532


Q ss_pred             -------CcEEEeecCCCccccCC-CCCcHHHHHHHhhcccCCCCC-CCCCCChhhhHHHHHHHHhhcccCCCCCCCchh
Q psy9184         470 -------EKICYYDLSQDEELFEG-EGDYQFDMYRMMRKQCQNNWQ-NFTPKNNVFWIHYLVDKATCLKKGYQYLRAPRH  540 (562)
Q Consensus       470 -------~g~v~~~l~~~pelF~g-~~~~q~dIy~lm~~~~~~~W~-~~~P~tn~~wl~yl~~~Ll~~~~~~~~~~~~~~  540 (562)
                             .....+..|++||.+.+ ..+...|+|++.-... ..+. +..|+..... ..+...+.. +.....+    .
T Consensus       177 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~il~-el~~~g~~p~~~~~~-~~~~~~i~~-~~~~~~~----~  249 (283)
T cd05048         177 ADYYRVQSKSLLPVRWMPPEAILYGKFTTESDIWSFGVVLW-EIFSYGLQPYYGFSN-QEVIEMIRS-RQLLPCP----E  249 (283)
T ss_pred             cccccccCCCcccccccCHHHhccCcCchhhhHHHHHHHHH-HHHcCCCCCCCCCCH-HHHHHHHHc-CCcCCCc----c
Confidence                   12333556899997654 4566789988643332 2222 3444432221 122232222 1111111    1


Q ss_pred             HHHHHHHHHHHhcCCCcCcCC
Q psy9184         541 QAFELLEELGQNALHFDSCYE  561 (562)
Q Consensus       541 ~~~~~l~~l~~~~l~~~s~~~  561 (562)
                      ..-..+.+|...++..+.+.|
T Consensus       250 ~~~~~~~~l~~~c~~~~p~~R  270 (283)
T cd05048         250 DCPARVYALMIECWNEIPARR  270 (283)
T ss_pred             cCCHHHHHHHHHHccCChhhC
Confidence            123456677777777666655

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer

>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases

Probab=99.91  E-value=1.2e-23  Score=213.03  Aligned_cols=228  Identities=18%  Similarity=0.194  Sum_probs=161.5

Q ss_pred             CCCceeeeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCccccc
Q psy9184         261 SALKNCKKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTEL  334 (562)
Q Consensus       261 ~~y~~~~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~l  334 (562)
                      ++|++.+.||+|+||.||+|      ..||+|.+....       .......+.+|+.+++.++|               
T Consensus         1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~-------~~~~~~~~~~e~~~l~~~~~---------------   58 (286)
T cd06622           1 DEIEVLDELGKGNYGSVYKVLHRPTGVTMAMKEIRLEL-------DESKFNQIIMELDILHKAVS---------------   58 (286)
T ss_pred             ChhhhhhhhcccCCeEEEEEEEcCCCcEEEEEEeeccc-------CHHHHHHHHHHHHHHHhcCC---------------
Confidence            35889999999999999999      889999987542       23344678899999999988               


Q ss_pred             ccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc------cCCHHHHHHHHHHHHHH
Q psy9184         335 LKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK------YRSPNQTYAMILQVVFS  408 (562)
Q Consensus       335 ~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~------~l~e~~i~~I~~QIl~a  408 (562)
                                 |||+++++.+..             ++.+|+||||++|+++...+.      .+++..+..++.||+.|
T Consensus        59 -----------~~i~~~~~~~~~-------------~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~  114 (286)
T cd06622          59 -----------PYIVDFYGAFFI-------------EGAVYMCMEYMDAGSLDKLYAGGVATEGIPEDVLRRITYAVVKG  114 (286)
T ss_pred             -----------CcHHhhhhheec-------------CCeEEEEEeecCCCCHHHHHHhccccCCCCHHHHHHHHHHHHHH
Confidence                       999999998875             568999999999987754432      47899999999999999


Q ss_pred             HHHHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecCC---cEEEeecCCCccccC
Q psy9184         409 LAVAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVGE---KICYYDLSQDEELFE  485 (562)
Q Consensus       409 L~yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~~---g~v~~~l~~~pelF~  485 (562)
                      |.|||++++|+||||||+||+++.++                    .++|+|||+++.....   ....+..|.+||.+.
T Consensus       115 l~~LH~~~~i~H~dl~p~nil~~~~~--------------------~~~l~dfg~~~~~~~~~~~~~~~~~~y~aPE~~~  174 (286)
T cd06622         115 LKFLKEEHNIIHRDVKPTNVLVNGNG--------------------QVKLCDFGVSGNLVASLAKTNIGCQSYMAPERIK  174 (286)
T ss_pred             HHHHHhcCCEeeCCCCHHHEEECCCC--------------------CEEEeecCCcccccCCccccCCCccCccCcchhc
Confidence            99999746999999999999999876                    7999999999765331   122344678899876


Q ss_pred             CCC-------CcHHHHHHHhhcccCCCCCCCCCCChh---hhHHHHHHHHhhcccCCCCCCCchhHHHHHHHHHHHhcCC
Q psy9184         486 GEG-------DYQFDMYRMMRKQCQNNWQNFTPKNNV---FWIHYLVDKATCLKKGYQYLRAPRHQAFELLEELGQNALH  555 (562)
Q Consensus       486 g~~-------~~q~dIy~lm~~~~~~~W~~~~P~tn~---~wl~yl~~~Ll~~~~~~~~~~~~~~~~~~~l~~l~~~~l~  555 (562)
                      +..       ..+.|+|+++-. ....+.+..|+...   .+...+. .... + .+....   ...-..+..|...++.
T Consensus       175 ~~~~~~~~~~~~~~DiwslG~i-l~~l~~g~~pf~~~~~~~~~~~~~-~~~~-~-~~~~~~---~~~~~~~~~li~~~l~  247 (286)
T cd06622         175 SGGPNQNPTYTVQSDVWSLGLS-ILEMALGRYPYPPETYANIFAQLS-AIVD-G-DPPTLP---SGYSDDAQDFVAKCLN  247 (286)
T ss_pred             CCCCCccCCCCcccchHhHHHH-HHHHHhCCCCCCCcchhhHHHHHH-HHhh-c-CCCCCC---cccCHHHHHHHHHHcc
Confidence            532       345888876433 32344444554321   1122211 1112 1 111111   1134466677778887


Q ss_pred             CcCcCC
Q psy9184         556 FDSCYE  561 (562)
Q Consensus       556 ~~s~~~  561 (562)
                      .+...|
T Consensus       248 ~~p~~R  253 (286)
T cd06622         248 KIPNRR  253 (286)
T ss_pred             cCcccC
Confidence            766554

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>PHA03207 serine/threonine kinase US3; Provisional

Probab=99.91  E-value=1.1e-23  Score=224.94  Aligned_cols=166  Identities=14%  Similarity=0.099  Sum_probs=137.4

Q ss_pred             CCCceeeeeeccCceEEEEE--------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCccc
Q psy9184         261 SALKNCKKIGEGVYGEVFKL--------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFT  332 (562)
Q Consensus       261 ~~y~~~~~LG~GsfG~Vyka--------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv  332 (562)
                      .+|.+++.||+|+||.||+|        ..||+|.+....             ...+|+.+++.++|             
T Consensus        92 ~~y~i~~~Lg~G~~g~Vy~~~~~~~~~~~~v~vK~~~~~~-------------~~~~E~~il~~l~h-------------  145 (392)
T PHA03207         92 MQYNILSSLTPGSEGEVFVCTKHGDEQRKKVIVKAVTGGK-------------TPGREIDILKTISH-------------  145 (392)
T ss_pred             CceEEEEeecCCCCeEEEEEEEcCCccceeEEEEeccccc-------------cHHHHHHHHHhcCC-------------
Confidence            57999999999999999998        578999876431             34579999999998             


Q ss_pred             ccccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc---cCCHHHHHHHHHHHHHHH
Q psy9184         333 ELLKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK---YRSPNQTYAMILQVVFSL  409 (562)
Q Consensus       333 ~l~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~---~l~e~~i~~I~~QIl~aL  409 (562)
                                   |||+++++.|..             ...+|+|||++. +++++.+.   .+++.+++.++.||+.||
T Consensus       146 -------------~~iv~~~~~~~~-------------~~~~~lv~e~~~-~~l~~~l~~~~~l~~~~~~~i~~ql~~aL  198 (392)
T PHA03207        146 -------------RAIINLIHAYRW-------------KSTVCMVMPKYK-CDLFTYVDRSGPLPLEQAITIQRRLLEAL  198 (392)
T ss_pred             -------------CCccceeeeEee-------------CCEEEEEehhcC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHH
Confidence                         999999988865             558999999996 45665543   489999999999999999


Q ss_pred             HHHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecC-------CcEEEeecCCCcc
Q psy9184         410 AVAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVG-------EKICYYDLSQDEE  482 (562)
Q Consensus       410 ~yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~-------~g~v~~~l~~~pe  482 (562)
                      .|||+ .||+||||||+|||++..+                    .++|+|||+++....       .+..++..|++||
T Consensus       199 ~~LH~-~givHrDlkp~Nill~~~~--------------------~~~l~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE  257 (392)
T PHA03207        199 AYLHG-RGIIHRDVKTENIFLDEPE--------------------NAVLGDFGAACKLDAHPDTPQCYGWSGTLETNSPE  257 (392)
T ss_pred             HHHHH-CCccccCCCHHHEEEcCCC--------------------CEEEccCccccccCcccccccccccccccCccCHh
Confidence            99999 7999999999999999886                    799999999976543       1335677889999


Q ss_pred             ccCCC-CCcHHHHHHHhhc
Q psy9184         483 LFEGE-GDYQFDMYRMMRK  500 (562)
Q Consensus       483 lF~g~-~~~q~dIy~lm~~  500 (562)
                      ++.+. .....|||++.-.
T Consensus       258 ~~~~~~~~~~~DvwslGvi  276 (392)
T PHA03207        258 LLALDPYCAKTDIWSAGLV  276 (392)
T ss_pred             HhcCCCCCchhhHHHHHHH
Confidence            98874 5566899886433

>KOG2345|consensus

Probab=99.91  E-value=8.9e-24  Score=206.69  Aligned_cols=222  Identities=16%  Similarity=0.190  Sum_probs=170.4

Q ss_pred             CCCCCceeeeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCccc
Q psy9184         259 PSSALKNCKKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFT  332 (562)
Q Consensus       259 ~~~~y~~~~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv  332 (562)
                      ...+|.+.+.||+|||+.||++      ..||+|.|....        .+..+.+++|+...++++|             
T Consensus        19 n~~Ryri~~~LgeGGfsfv~LV~~~s~~~~YAlKkI~c~~--------~~~~e~~~rEid~~rkf~s-------------   77 (302)
T KOG2345|consen   19 NNKRYRIQRLLGEGGFSFVDLVKGLSTGHLYALKKILCHS--------QEDIEEALREIDNHRKFNS-------------   77 (302)
T ss_pred             cCceEEEeeeecCCCceeeeeecccCcccchhhheeeccc--------hHHHHHHHHHHHHHHhhCC-------------
Confidence            4578999999999999999999      899999999763        5566788999999999999             


Q ss_pred             ccccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc-------cCCHHHHHHHHHHH
Q psy9184         333 ELLKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK-------YRSPNQTYAMILQV  405 (562)
Q Consensus       333 ~l~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~-------~l~e~~i~~I~~QI  405 (562)
                                   ||+++++++.....+.        .....||++.|...|++++.+.       .+++.++..|+.+|
T Consensus        78 -------------~~vl~l~dh~l~~~~D--------~~~~~yll~Pyy~~Gsl~d~i~~~k~kg~~~sE~~iL~if~gi  136 (302)
T KOG2345|consen   78 -------------PNVLRLVDHQLREEKD--------GKHEAYLLLPYYKRGSLLDEIERLKIKGNFVSEAQILWIFLGI  136 (302)
T ss_pred             -------------cchHHHHHHHHHhhcc--------CceeEEEEeehhccccHHHHHHHHhhcCCccCHHHHHHHHHHH
Confidence                         9999998887653311        3457999999999999998875       38999999999999


Q ss_pred             HHHHHHHHhhCC--eEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecC--------------
Q psy9184         406 VFSLAVAEVELE--FEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVG--------------  469 (562)
Q Consensus       406 l~aL~yLH~~~~--IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~--------------  469 (562)
                      +.||.+||+ ..  +.||||||.|||+...+                    .++|.|||.++...-              
T Consensus       137 c~gL~~lH~-~~~~yAH~DiKP~NILls~~~--------------------~~vl~D~GS~~~a~i~i~~~~~a~~lQe~  195 (302)
T KOG2345|consen  137 CRGLEALHE-KEPPYAHRDIKPANILLSDSG--------------------LPVLMDLGSATQAPIQIEGSRQALRLQEW  195 (302)
T ss_pred             HHHHHHHhc-cCCcccccCCCcceeEecCCC--------------------ceEEEeccCccccceEeechHHHHHHHHH
Confidence            999999999 57  99999999999999976                    799999999876432              


Q ss_pred             CcEEEeecCCCccccCCCC----CcHHHHHHHhhccc--------------------------CCCCCCCCCCChhhhHH
Q psy9184         470 EKICYYDLSQDEELFEGEG----DYQFDMYRMMRKQC--------------------------QNNWQNFTPKNNVFWIH  519 (562)
Q Consensus       470 ~g~v~~~l~~~pelF~g~~----~~q~dIy~lm~~~~--------------------------~~~W~~~~P~tn~~wl~  519 (562)
                      ....-+-.|.+||+|....    +...|||++.-+..                          +-.|+.-.|++..  |+
T Consensus       196 a~e~Ct~pyRAPELf~vk~~~ti~ertDIWSLGCtLYa~mf~~sPfe~~~~~GgSlaLAv~n~q~s~P~~~~yse~--l~  273 (302)
T KOG2345|consen  196 AEERCTIPYRAPELFNVKSHCTITERTDIWSLGCTLYAMMFGESPFERIYQQGGSLALAVQNAQISIPNSSRYSEA--LH  273 (302)
T ss_pred             HHHhCCCcccCchheecccCcccccccchhhhhHHHHHHHHcCCcchHHhhcCCeEEEeeeccccccCCCCCccHH--HH
Confidence            1112255789999998742    33477777544332                          2366777777666  67


Q ss_pred             HHHHHHhhcccCCCCCCCchhHHHHHHHH
Q psy9184         520 YLVDKATCLKKGYQYLRAPRHQAFELLEE  548 (562)
Q Consensus       520 yl~~~Ll~~~~~~~~~~~~~~~~~~~l~~  548 (562)
                      -++.+|+.   .-+..|+.....+..+..
T Consensus       274 ~lik~mlq---vdP~qRP~i~~ll~~~d~  299 (302)
T KOG2345|consen  274 QLIKSMLQ---VDPNQRPTIPELLSKLDD  299 (302)
T ss_pred             HHHHHHhc---CCcccCCCHHHHHHHHHh
Confidence            77777887   223333333333444443

>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase

Probab=99.90  E-value=8.7e-24  Score=216.24  Aligned_cols=170  Identities=19%  Similarity=0.268  Sum_probs=138.6

Q ss_pred             CCCceeeeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCccccc
Q psy9184         261 SALKNCKKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTEL  334 (562)
Q Consensus       261 ~~y~~~~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~l  334 (562)
                      ++|...++||+|+||.||+|      ..||+|.+.....       ......+.+|+.+++.++|               
T Consensus         6 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~vaiK~~~~~~~-------~~~~~~~~~E~~~l~~l~h---------------   63 (301)
T cd07873           6 ETYIKLDKLGEGTYATVYKGRSKLTDNLVALKEIRLEHE-------EGAPCTAIREVSLLKDLKH---------------   63 (301)
T ss_pred             cceEEeeEeccCcCEEEEEEEEcCCCcEEEEEEEecccc-------cCchhHHHHHHHHHHhcCC---------------
Confidence            57999999999999999999      7899999976431       1122356789999999998               


Q ss_pred             ccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc----cCCHHHHHHHHHHHHHHHH
Q psy9184         335 LKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK----YRSPNQTYAMILQVVFSLA  410 (562)
Q Consensus       335 ~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~----~l~e~~i~~I~~QIl~aL~  410 (562)
                                 |||+++++++..             ++..|+||||+. |++...+.    .+++..+..++.||+.||.
T Consensus        64 -----------~nI~~~~~~~~~-------------~~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~qi~~aL~  118 (301)
T cd07873          64 -----------ANIVTLHDIIHT-------------EKSLTLVFEYLD-KDLKQYLDDCGNSINMHNVKLFLFQLLRGLN  118 (301)
T ss_pred             -----------CCcceEEEEEec-------------CCeEEEEEeccc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHH
Confidence                       999999999875             558999999997 45655443    3789999999999999999


Q ss_pred             HHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecC-----CcEEEeecCCCccccC
Q psy9184         411 VAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVG-----EKICYYDLSQDEELFE  485 (562)
Q Consensus       411 yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~-----~g~v~~~l~~~pelF~  485 (562)
                      |||+ .+|+||||||+|||++.++                    .++|+|||+++....     .....+..|++||.+.
T Consensus       119 ~lH~-~~i~H~dlkp~Nil~~~~~--------------------~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~~PE~~~  177 (301)
T cd07873         119 YCHR-RKVLHRDLKPQNLLINERG--------------------ELKLADFGLARAKSIPTKTYSNEVVTLWYRPPDILL  177 (301)
T ss_pred             HHHh-CCeeCCCCCHHHEEECCCC--------------------cEEECcCcchhccCCCCCcccccceeecccCcHHHh
Confidence            9999 7999999999999999886                    799999999976542     1234467789999887


Q ss_pred             CC--CCcHHHHHHHh
Q psy9184         486 GE--GDYQFDMYRMM  498 (562)
Q Consensus       486 g~--~~~q~dIy~lm  498 (562)
                      +.  ...+.|||++.
T Consensus       178 ~~~~~~~~~Dv~slG  192 (301)
T cd07873         178 GSTDYSTQIDMWGVG  192 (301)
T ss_pred             CCCCCccHHHHHHHH
Confidence            64  34568998863

Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl

>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase

Probab=99.90  E-value=8.9e-24  Score=211.76  Aligned_cols=235  Identities=19%  Similarity=0.266  Sum_probs=164.6

Q ss_pred             CCCCCceeeeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCccc
Q psy9184         259 PSSALKNCKKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFT  332 (562)
Q Consensus       259 ~~~~y~~~~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv  332 (562)
                      +.+.|...+.||+|+||.||+|      +.||+|++....         .....+.+|+.+++.+.+             
T Consensus         4 ~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~---------~~~~~~~~e~~~l~~~~~-------------   61 (272)
T cd06637           4 PAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTG---------DEEEEIKQEINMLKKYSH-------------   61 (272)
T ss_pred             hhhhhhHHHheeecCCeEEEEEEEcCCCcEEEEEEEEcCC---------ccHHHHHHHHHHHHHhcC-------------
Confidence            4577899999999999999999      689999987542         112467889999999854             


Q ss_pred             ccccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc-----cCCHHHHHHHHHHHHH
Q psy9184         333 ELLKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK-----YRSPNQTYAMILQVVF  407 (562)
Q Consensus       333 ~l~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~-----~l~e~~i~~I~~QIl~  407 (562)
                                  ||||+++++.|....      +. ..+..+|++|||+.+|++.+.+.     .+++..+..++.|++.
T Consensus        62 ------------h~~i~~~~~~~~~~~------~~-~~~~~~~iv~e~~~~~~L~~~l~~~~~~~l~~~~~~~~~~qi~~  122 (272)
T cd06637          62 ------------HRNIATYYGAFIKKN------PP-GMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILR  122 (272)
T ss_pred             ------------CCCeeeEeeEEeecC------CC-CCCcEEEEEEEcCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHH
Confidence                        499999998886522      00 11347899999999988776553     3789999999999999


Q ss_pred             HHHHHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecC-----CcEEEeecCCCcc
Q psy9184         408 SLAVAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVG-----EKICYYDLSQDEE  482 (562)
Q Consensus       408 aL~yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~-----~g~v~~~l~~~pe  482 (562)
                      ||+|||+ .+|+||||||+||+++.++                    .++|+|||+++....     ....++..|++||
T Consensus       123 ~l~~LH~-~~ivh~dl~~~nili~~~~--------------------~~~l~Dfg~~~~~~~~~~~~~~~~g~~~y~aPE  181 (272)
T cd06637         123 GLSHLHQ-HKVIHRDIKGQNVLLTENA--------------------EVKLVDFGVSAQLDRTVGRRNTFIGTPYWMAPE  181 (272)
T ss_pred             HHHHHHH-CCCccCCCCHHHEEECCCC--------------------CEEEccCCCceecccccccCCcccccccccCHh
Confidence            9999999 7999999999999999886                    699999999986543     1234466788999


Q ss_pred             ccCC------CCCcHHHHHHHhhcccCCCCCCCCCCChhhhHHHHHHHHhhcccCCCCCCCchhHHHHHHHHHHHhcCCC
Q psy9184         483 LFEG------EGDYQFDMYRMMRKQCQNNWQNFTPKNNVFWIHYLVDKATCLKKGYQYLRAPRHQAFELLEELGQNALHF  556 (562)
Q Consensus       483 lF~g------~~~~q~dIy~lm~~~~~~~W~~~~P~tn~~wl~yl~~~Ll~~~~~~~~~~~~~~~~~~~l~~l~~~~l~~  556 (562)
                      ++.+      ..+...|+|++ |......+.+..|+...........  .. ........  ....-+.+.+|...+|..
T Consensus       182 ~~~~~~~~~~~~~~~~Dv~sl-Gv~l~el~~g~~p~~~~~~~~~~~~--~~-~~~~~~~~--~~~~~~~~~~li~~~l~~  255 (272)
T cd06637         182 VIACDENPDATYDFKSDLWSL-GITAIEMAEGAPPLCDMHPMRALFL--IP-RNPAPRLK--SKKWSKKFQSFIESCLVK  255 (272)
T ss_pred             HhccccCcCCCCCchhhHHHH-HHHHHHHHhCCCCccccCHHHHHHH--Hh-cCCCCCCC--CCCcCHHHHHHHHHHcCC
Confidence            8753      24456899886 3333334445555533221211111  11 11111111  111234677888888887


Q ss_pred             cCcCC
Q psy9184         557 DSCYE  561 (562)
Q Consensus       557 ~s~~~  561 (562)
                      +...|
T Consensus       256 ~p~~R  260 (272)
T cd06637         256 NHSQR  260 (272)
T ss_pred             ChhhC
Confidence            76655

Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ

>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2

Probab=99.90  E-value=2.6e-23  Score=210.01  Aligned_cols=175  Identities=20%  Similarity=0.205  Sum_probs=139.9

Q ss_pred             CCCCCceeeeeeccCceEEEEE----------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCC
Q psy9184         259 PSSALKNCKKIGEGVYGEVFKL----------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENST  328 (562)
Q Consensus       259 ~~~~y~~~~~LG~GsfG~Vyka----------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~  328 (562)
                      ...+|+..++||+|+||.||+|          ..||+|++....       .......+.+|+.+++.++|         
T Consensus         5 ~~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~va~K~~~~~~-------~~~~~~~~~~e~~~l~~~~~---------   68 (279)
T cd05109           5 KETELKKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENT-------SPKANKEILDEAYVMAGVGS---------   68 (279)
T ss_pred             chhheeeeeecCCCCCceEEEEEEecCCCccceEEEEEEecCCC-------CHHHHHHHHHHHHHHHhcCC---------
Confidence            4467899999999999999999          148999987543       23344678899999999988         


Q ss_pred             CcccccccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc----cCCHHHHHHHHHH
Q psy9184         329 PCFTELLKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK----YRSPNQTYAMILQ  404 (562)
Q Consensus       329 p~fv~l~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~----~l~e~~i~~I~~Q  404 (562)
                                       |||+++++.+..              ...+++|||+++|++++.+.    .+++..+..++.|
T Consensus        69 -----------------~~i~~~~~~~~~--------------~~~~l~~~~~~~g~l~~~l~~~~~~~~~~~~~~~~~q  117 (279)
T cd05109          69 -----------------PYVCRLLGICLT--------------STVQLVTQLMPYGCLLDYVRENKDRIGSQDLLNWCVQ  117 (279)
T ss_pred             -----------------CCCceEEEEEcC--------------CCcEEEEEcCCCCCHHHHHhhccCCCCHHHHHHHHHH
Confidence                             899998877752              35789999999999887764    3789999999999


Q ss_pred             HHHHHHHHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecCCcE-------EEeec
Q psy9184         405 VVFSLAVAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVGEKI-------CYYDL  477 (562)
Q Consensus       405 Il~aL~yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~~g~-------v~~~l  477 (562)
                      |+.||.|||+ .+|+||||||+|||++.++                    .+||+|||+++.......       .....
T Consensus       118 i~~~L~~lH~-~~iiH~dlkp~Nil~~~~~--------------------~~kL~dfG~~~~~~~~~~~~~~~~~~~~~~  176 (279)
T cd05109         118 IAKGMSYLEE-VRLVHRDLAARNVLVKSPN--------------------HVKITDFGLARLLDIDETEYHADGGKVPIK  176 (279)
T ss_pred             HHHHHHHHHH-CCeeccccccceEEEcCCC--------------------cEEECCCCceeecccccceeecCCCccchh
Confidence            9999999999 7999999999999998775                    699999999987653211       12345


Q ss_pred             CCCccccCC-CCCcHHHHHHHhhcc
Q psy9184         478 SQDEELFEG-EGDYQFDMYRMMRKQ  501 (562)
Q Consensus       478 ~~~pelF~g-~~~~q~dIy~lm~~~  501 (562)
                      |++||...+ ..+...|||++.-..
T Consensus       177 y~~PE~~~~~~~~~~~Di~slG~~l  201 (279)
T cd05109         177 WMALESILHRRFTHQSDVWSYGVTV  201 (279)
T ss_pred             hCCHHHhccCCCCchhHHHHHHHHH
Confidence            788887655 456678998865433

Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve

>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases

Probab=99.90  E-value=1.5e-23  Score=211.03  Aligned_cols=227  Identities=15%  Similarity=0.109  Sum_probs=163.5

Q ss_pred             CCCceeeeeeccCceEEEEE-----------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCC
Q psy9184         261 SALKNCKKIGEGVYGEVFKL-----------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTP  329 (562)
Q Consensus       261 ~~y~~~~~LG~GsfG~Vyka-----------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p  329 (562)
                      .+|.+.+.||+|+||.||+|           ..||+|++....       .....+.+.+|+.+++.+.|          
T Consensus         5 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~~~vaiK~~~~~~-------~~~~~~~~~~e~~~l~~l~~----------   67 (280)
T cd05049           5 DTIVLKRELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETA-------SNDARKDFEREAELLTNFQH----------   67 (280)
T ss_pred             HHhhHHhhccccCCceEeeeeeccccCcCCcceEEEEeecccC-------CHHHHHHHHHHHHHHHhcCC----------
Confidence            56888999999999999998           358999987543       12234678899999999998          


Q ss_pred             cccccccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc-----------------c
Q psy9184         330 CFTELLKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK-----------------Y  392 (562)
Q Consensus       330 ~fv~l~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~-----------------~  392 (562)
                                      |||+++++.+..             ....|+||||++||++.+.+.                 .
T Consensus        68 ----------------~~i~~~~~~~~~-------------~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~  118 (280)
T cd05049          68 ----------------ENIVKFYGVCTE-------------GDPPIMVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGE  118 (280)
T ss_pred             ----------------CCchheeeEEec-------------CCCeEEEEecCCCCCHHHHHHhcCCchhhhccccccccc
Confidence                            999999988865             458999999999998765542                 2


Q ss_pred             CCHHHHHHHHHHHHHHHHHHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecC---
Q psy9184         393 RSPNQTYAMILQVVFSLAVAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVG---  469 (562)
Q Consensus       393 l~e~~i~~I~~QIl~aL~yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~---  469 (562)
                      +++.++..++.||+.||.|||+ .||+||||||+|||++.++                    .++|+|||+++....   
T Consensus       119 l~~~~~~~~~~~i~~~l~~lH~-~~i~h~dlkp~nili~~~~--------------------~~kl~d~g~~~~~~~~~~  177 (280)
T cd05049         119 LTLSQLLQIAVQIASGMVYLAS-QHFVHRDLATRNCLVGYDL--------------------VVKIGDFGMSRDVYTTDY  177 (280)
T ss_pred             ccHHHHHHHHHHHHHHHHHHhh-CCeeccccccceEEEcCCC--------------------eEEECCcccceecccCcc
Confidence            6788999999999999999999 7999999999999999886                    799999999986532   


Q ss_pred             ----CcEEEeecCCCccccCC-CCCcHHHHHHHhhcccCCCCC-CCCCCChhhhHHHHHHHHhhcccCCCCCCCchhHHH
Q psy9184         470 ----EKICYYDLSQDEELFEG-EGDYQFDMYRMMRKQCQNNWQ-NFTPKNNVFWIHYLVDKATCLKKGYQYLRAPRHQAF  543 (562)
Q Consensus       470 ----~g~v~~~l~~~pelF~g-~~~~q~dIy~lm~~~~~~~W~-~~~P~tn~~wl~yl~~~Ll~~~~~~~~~~~~~~~~~  543 (562)
                          .....+..|++||++.+ ..+...|||++. ......+. +..|+.... ..-+...... +. +.....   ..-
T Consensus       178 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG-~il~e~~~~g~~p~~~~~-~~~~~~~~~~-~~-~~~~~~---~~~  250 (280)
T cd05049         178 YRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFG-VVLWEIFTYGKQPWYGLS-NEEVIECITQ-GR-LLQRPR---TCP  250 (280)
T ss_pred             eecCCCCcccceecChhhhccCCcchhhhHHHHH-HHHHHHHhcCCCCCCCCC-HHHHHHHHHc-CC-cCCCCC---CCC
Confidence                12223456889998776 445568998864 33334443 555553221 1111222222 11 111111   123


Q ss_pred             HHHHHHHHhcCCCcCcCC
Q psy9184         544 ELLEELGQNALHFDSCYE  561 (562)
Q Consensus       544 ~~l~~l~~~~l~~~s~~~  561 (562)
                      ..+.+|.+.+|..+...|
T Consensus       251 ~~~~~li~~~l~~~p~~R  268 (280)
T cd05049         251 SEVYDIMLGCWKRDPQQR  268 (280)
T ss_pred             HHHHHHHHHHcCCCcccC
Confidence            467778888888887765

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt

>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9

Probab=99.90  E-value=2.7e-23  Score=206.40  Aligned_cols=227  Identities=18%  Similarity=0.214  Sum_probs=164.0

Q ss_pred             CCceeeeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCcccccc
Q psy9184         262 ALKNCKKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTELL  335 (562)
Q Consensus       262 ~y~~~~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~l~  335 (562)
                      +|+..+.||+|+||.||.+      +.+|+|.+....      ........+.+|+.+++.++|                
T Consensus         1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~k~~~~~~------~~~~~~~~~~~e~~~l~~~~h----------------   58 (256)
T cd08221           1 HYIPIRVLGKGAFGEATLYRRTEDDSLVVWKEVNLTR------LSEKERRDALNEIVILSLLQH----------------   58 (256)
T ss_pred             CceEeeEecccCCceEEEEEEcCCCcEEEEEEEeecc------cchhHHHHHHHHHHHHHhCCC----------------
Confidence            4889999999999999888      789999987653      123344677899999999988                


Q ss_pred             cccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc-----cCCHHHHHHHHHHHHHHHH
Q psy9184         336 KCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK-----YRSPNQTYAMILQVVFSLA  410 (562)
Q Consensus       336 ~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~-----~l~e~~i~~I~~QIl~aL~  410 (562)
                                +||+++++++.+             .+.++++|||+++|++.+.+.     .+++.++..++.|++.||.
T Consensus        59 ----------~~i~~~~~~~~~-------------~~~~~~~~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~  115 (256)
T cd08221          59 ----------PNIIAYYNHFMD-------------DNTLLIEMEYANGGTLYDKIVRQKGQLFEEEMVLWYLFQIVSAVS  115 (256)
T ss_pred             ----------CCeeEEEeEEec-------------CCeEEEEEEecCCCcHHHHHHhccccCCCHHHHHHHHHHHHHHHH
Confidence                      999999999875             558999999999998877663     2789999999999999999


Q ss_pred             HHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecCCc-----EEEeecCCCccccC
Q psy9184         411 VAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVGEK-----ICYYDLSQDEELFE  485 (562)
Q Consensus       411 yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~~g-----~v~~~l~~~pelF~  485 (562)
                      |||+ .+++||||+|+||+++.++                    .+||+|||+++......     ...+..|.+||.+.
T Consensus       116 ~lh~-~~i~h~dl~p~ni~~~~~~--------------------~~kl~d~~~~~~~~~~~~~~~~~~~~~~y~ape~~~  174 (256)
T cd08221         116 YIHK-AGILHRDIKTLNIFLTKAG--------------------LIKLGDFGISKILGSEYSMAETVVGTPYYMSPELCQ  174 (256)
T ss_pred             HHHh-CCccccCCChHhEEEeCCC--------------------CEEECcCcceEEcccccccccccCCCccccCHhhcC
Confidence            9999 7999999999999999876                    79999999998765422     34566788899876


Q ss_pred             CC-CCcHHHHHHHhhcccCCCCCCCCCCChhhhHHHHHHHHhhcccCCCCCCCchhHHHHHHHHHHHhcCCCcCcCC
Q psy9184         486 GE-GDYQFDMYRMMRKQCQNNWQNFTPKNNVFWIHYLVDKATCLKKGYQYLRAPRHQAFELLEELGQNALHFDSCYE  561 (562)
Q Consensus       486 g~-~~~q~dIy~lm~~~~~~~W~~~~P~tn~~wl~yl~~~Ll~~~~~~~~~~~~~~~~~~~l~~l~~~~l~~~s~~~  561 (562)
                      +. .+.+.|+|++.-... ..+.+..|+....-.. ....... + .++...   ......+..|...+|..+...|
T Consensus       175 ~~~~~~~~Dv~slG~i~~-~l~~g~~~~~~~~~~~-~~~~~~~-~-~~~~~~---~~~~~~~~~~i~~~l~~~p~~R  244 (256)
T cd08221         175 GVKYNFKSDIWALGCVLY-ELLTLKRTFDATNPLN-LVVKIVQ-G-NYTPVV---SVYSSELISLVHSLLQQDPEKR  244 (256)
T ss_pred             CCCCCCcchhHHHHHHHH-HHHHCCCCCCCCCHHH-HHHHHHc-C-CCCCCc---cccCHHHHHHHHHHcccCcccC
Confidence            63 455688888543332 2223333432221111 1112222 1 122111   1123467777788887776655

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa

>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5

Probab=99.90  E-value=7.6e-24  Score=211.96  Aligned_cols=171  Identities=20%  Similarity=0.287  Sum_probs=139.6

Q ss_pred             CCCCceeeeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCcccc
Q psy9184         260 SSALKNCKKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTE  333 (562)
Q Consensus       260 ~~~y~~~~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~  333 (562)
                      ..+|++.+.||+|+||.||+|      +.||+|++....        ......+.+|+.+++.++|              
T Consensus         8 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~--------~~~~~~~~~e~~~l~~~~h--------------   65 (267)
T cd06646           8 QHDYELIQRVGSGTYGDVYKARNLHTGELAAVKIIKLEP--------GDDFSLIQQEIFMVKECKH--------------   65 (267)
T ss_pred             hhhcchhheeecCCCeEEEEEEECCCCeEEEEEEEecCc--------cchHHHHHHHHHHHHhcCC--------------
Confidence            467999999999999999999      679999997543        1223467789999999998              


Q ss_pred             cccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc---cCCHHHHHHHHHHHHHHHH
Q psy9184         334 LLKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK---YRSPNQTYAMILQVVFSLA  410 (562)
Q Consensus       334 l~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~---~l~e~~i~~I~~QIl~aL~  410 (562)
                                  |||+++++.+..             ++.+|+||||+.+|++.+.+.   .+++.++..++.|++.||.
T Consensus        66 ------------~~ii~~~~~~~~-------------~~~~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~  120 (267)
T cd06646          66 ------------CNIVAYFGSYLS-------------REKLWICMEYCGGGSLQDIYHVTGPLSELQIAYVCRETLQGLA  120 (267)
T ss_pred             ------------CCeeeeeEEEEe-------------CCEEEEEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHH
Confidence                        999999988865             558999999999988766553   4889999999999999999


Q ss_pred             HHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecC-----CcEEEeecCCCccccC
Q psy9184         411 VAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVG-----EKICYYDLSQDEELFE  485 (562)
Q Consensus       411 yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~-----~g~v~~~l~~~pelF~  485 (562)
                      |||+ .+|+||||||+||+++.++                    .++|+|||+++....     .+...+..|++||.+.
T Consensus       121 ~lH~-~~i~H~dl~p~nill~~~~--------------------~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~~PE~~~  179 (267)
T cd06646         121 YLHS-KGKMHRDIKGANILLTDNG--------------------DVKLADFGVAAKITATIAKRKSFIGTPYWMAPEVAA  179 (267)
T ss_pred             HHHH-CCccccCCCHHHEEECCCC--------------------CEEECcCccceeecccccccCccccCccccCHhHcc
Confidence            9999 7999999999999998876                    699999999987643     1233456788999874


Q ss_pred             C----CCCcHHHHHHHh
Q psy9184         486 G----EGDYQFDMYRMM  498 (562)
Q Consensus       486 g----~~~~q~dIy~lm  498 (562)
                      +    ..+.+.|+|+.+
T Consensus       180 ~~~~~~~~~~~Dvws~G  196 (267)
T cd06646         180 VEKNGGYNQLCDIWAVG  196 (267)
T ss_pred             cccCCCCcchhhHHHHH
Confidence            3    234458888753

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6

Probab=99.90  E-value=3.4e-23  Score=207.02  Aligned_cols=231  Identities=19%  Similarity=0.249  Sum_probs=162.9

Q ss_pred             CCCceeeeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCccccc
Q psy9184         261 SALKNCKKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTEL  334 (562)
Q Consensus       261 ~~y~~~~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~l  334 (562)
                      ++|++.+.||+|+||.||+|      ..||||.+....     .........+.+|+.+++.++|               
T Consensus         2 ~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~-----~~~~~~~~~~~~e~~~l~~l~h---------------   61 (267)
T cd08228           2 ANFQIEKKIGRGQFSEVYRATCLLDRKPVALKKVQIFE-----MMDAKARQDCVKEIDLLKQLNH---------------   61 (267)
T ss_pred             cceeeeeeeccCCCeeEEEEEEeCCCCEEEEEEeeccc-----cCCHHHHHHHHHHHHHHHhCCC---------------
Confidence            46899999999999999999      899999887532     1223444678899999999998               


Q ss_pred             ccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc-------cCCHHHHHHHHHHHHH
Q psy9184         335 LKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK-------YRSPNQTYAMILQVVF  407 (562)
Q Consensus       335 ~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~-------~l~e~~i~~I~~QIl~  407 (562)
                                 |||+++++.+..             .+..|++|||+++|++...+.       .+++..+..++.||+.
T Consensus        62 -----------~~i~~~~~~~~~-------------~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~  117 (267)
T cd08228          62 -----------PNVIKYLDSFIE-------------DNELNIVLELADAGDLSQMIKYFKKQKRLIPERTVWKYFVQLCS  117 (267)
T ss_pred             -----------cceeeeeeeEEE-------------CCeEEEEEEecCCCcHHHHHHHhhhccCCCCHHHHHHHHHHHHH
Confidence                       999999988875             458999999999987754442       2788999999999999


Q ss_pred             HHHHHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecCC-----cEEEeecCCCcc
Q psy9184         408 SLAVAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVGE-----KICYYDLSQDEE  482 (562)
Q Consensus       408 aL~yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~~-----g~v~~~l~~~pe  482 (562)
                      ||.|||+ .+|+||||||+|||++.++                    .++|+|||+++.....     .......|++||
T Consensus       118 ~l~~LH~-~~i~H~dl~~~nil~~~~~--------------------~~~l~d~g~~~~~~~~~~~~~~~~~~~~~~aPE  176 (267)
T cd08228         118 AVEHMHS-RRVMHRDIKPANVFITATG--------------------VVKLGDLGLGRFFSSKTTAAHSLVGTPYYMSPE  176 (267)
T ss_pred             HHHHHhh-CCeeCCCCCHHHEEEcCCC--------------------CEEECccccceeccchhHHHhcCCCCccccChh
Confidence            9999999 7999999999999998876                    6999999999876531     223455688999


Q ss_pred             ccCCC-CCcHHHHHHHhhcccCCCCCCCCCCCh-hhhHHHHHHHHhhcccCCCCCCCchhHHHHHHHHHHHhcCCCcCcC
Q psy9184         483 LFEGE-GDYQFDMYRMMRKQCQNNWQNFTPKNN-VFWIHYLVDKATCLKKGYQYLRAPRHQAFELLEELGQNALHFDSCY  560 (562)
Q Consensus       483 lF~g~-~~~q~dIy~lm~~~~~~~W~~~~P~tn-~~wl~yl~~~Ll~~~~~~~~~~~~~~~~~~~l~~l~~~~l~~~s~~  560 (562)
                      .+.+. .+...|+|++. ......+.+..|+.+ ..-...+.+.+..  ..++..  .....-..+.++...++..+...
T Consensus       177 ~~~~~~~~~~~Di~slG-~~l~el~~g~~p~~~~~~~~~~~~~~~~~--~~~~~~--~~~~~~~~~~~li~~cl~~~p~~  251 (267)
T cd08228         177 RIHENGYNFKSDIWSLG-CLLYEMAALQSPFYGDKMNLFSLCQKIEQ--CDYPPL--PTEHYSEKLRELVSMCIYPDPDQ  251 (267)
T ss_pred             hhccCCCCchhhHHHHH-HHHHHHhcCCCCCccccccHHHHHHHHhc--CCCCCC--ChhhcCHHHHHHHHHHCCCCccc
Confidence            87663 45568998763 333233334444321 1111122232222  112111  11122345667777777766655


Q ss_pred             C
Q psy9184         561 E  561 (562)
Q Consensus       561 ~  561 (562)
                      |
T Consensus       252 R  252 (267)
T cd08228         252 R  252 (267)
T ss_pred             C
Confidence            4

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase

>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase

Probab=99.90  E-value=1.6e-23  Score=211.73  Aligned_cols=228  Identities=17%  Similarity=0.204  Sum_probs=163.9

Q ss_pred             CCCceeeeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCccccc
Q psy9184         261 SALKNCKKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTEL  334 (562)
Q Consensus       261 ~~y~~~~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~l  334 (562)
                      +.|++.+.||+|+||.||+|      ..+|+|.+....        ......+.+|+.+++.++|               
T Consensus         5 ~~~~i~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~--------~~~~~~~~~e~~~l~~l~h---------------   61 (282)
T cd06643           5 EFWEIIGELGDGAFGKVYKAQNKETGVLAAAKVIDTKS--------EEELEDYMVEIDILASCDH---------------   61 (282)
T ss_pred             HHHHHHhhcccCCCeEEEEEEECCCCeEEEEEEeCCCC--------HHHHHHHHHHHHHHHHCCC---------------
Confidence            44688899999999999999      678888886542        3445678899999999998               


Q ss_pred             ccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc----cCCHHHHHHHHHHHHHHHH
Q psy9184         335 LKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK----YRSPNQTYAMILQVVFSLA  410 (562)
Q Consensus       335 ~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~----~l~e~~i~~I~~QIl~aL~  410 (562)
                                 ||++++++.|..             ++..|+||||+.+|++...+.    .+++..+..++.||+.||.
T Consensus        62 -----------~~ii~~~~~~~~-------------~~~~~~v~e~~~~~~l~~~~~~~~~~l~~~~~~~~~~qi~~~L~  117 (282)
T cd06643          62 -----------PNIVKLLDAFYY-------------ENNLWILIEFCAGGAVDAVMLELERPLTEPQIRVVCKQTLEALN  117 (282)
T ss_pred             -----------CCeeeEEEEEee-------------CCEEEEEEEecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHH
Confidence                       999999988865             458999999999887755442    3889999999999999999


Q ss_pred             HHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecC-----CcEEEeecCCCccccC
Q psy9184         411 VAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVG-----EKICYYDLSQDEELFE  485 (562)
Q Consensus       411 yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~-----~g~v~~~l~~~pelF~  485 (562)
                      |||+ .||+||||||+|||++.++                    .++|+|||+++....     .....+..|++||++.
T Consensus       118 ~LH~-~~i~H~dlkp~nili~~~~--------------------~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~  176 (282)
T cd06643         118 YLHE-NKIIHRDLKAGNILFTLDG--------------------DIKLADFGVSAKNTRTIQRRDSFIGTPYWMAPEVVM  176 (282)
T ss_pred             HHHH-CCeeecCCCcccEEEccCC--------------------CEEEccccccccccccccccccccccccccCHhhcc
Confidence            9999 7999999999999998876                    799999999976543     1223456789999875


Q ss_pred             C------CCCcHHHHHHHhhcccCCCCCCCCCCChhhhHHHHHHHHhhcccCCCCCCCchhHHHHHHHHHHHhcCCCcCc
Q psy9184         486 G------EGDYQFDMYRMMRKQCQNNWQNFTPKNNVFWIHYLVDKATCLKKGYQYLRAPRHQAFELLEELGQNALHFDSC  559 (562)
Q Consensus       486 g------~~~~q~dIy~lm~~~~~~~W~~~~P~tn~~wl~yl~~~Ll~~~~~~~~~~~~~~~~~~~l~~l~~~~l~~~s~  559 (562)
                      +      ..+...|+|+++ ......+.+..|+........+......  . .+. .......-..+.+|...++.++..
T Consensus       177 ~~~~~~~~~~~~~Dv~slG-vil~el~~g~~p~~~~~~~~~~~~~~~~--~-~~~-~~~~~~~~~~~~~li~~~l~~~p~  251 (282)
T cd06643         177 CETSKDRPYDYKADVWSLG-ITLIEMAQIEPPHHELNPMRVLLKIAKS--E-PPT-LAQPSRWSSEFKDFLKKCLEKNVD  251 (282)
T ss_pred             ccCCCCCCCCccchhhhHH-HHHHHHccCCCCccccCHHHHHHHHhhc--C-CCC-CCCccccCHHHHHHHHHHccCChh
Confidence            3      123458998763 3333344455555433223333332222  1 111 011111235678888999988876


Q ss_pred             CC
Q psy9184         560 YE  561 (562)
Q Consensus       560 ~~  561 (562)
                      .|
T Consensus       252 ~R  253 (282)
T cd06643         252 AR  253 (282)
T ss_pred             hC
Confidence            65

Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.

>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase

Probab=99.90  E-value=2.6e-23  Score=211.58  Aligned_cols=172  Identities=19%  Similarity=0.322  Sum_probs=140.4

Q ss_pred             CCCCCceeeeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCccc
Q psy9184         259 PSSALKNCKKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFT  332 (562)
Q Consensus       259 ~~~~y~~~~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv  332 (562)
                      +.+.|+++++||.|+||.||+|      ..+|+|++....        ....+.+.+|+.+++.++|             
T Consensus        10 ~~~~y~i~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~--------~~~~~~~~~e~~~l~~l~h-------------   68 (292)
T cd06644          10 PNEVWEIIGELGDGAFGKVYKAKNKETGALAAAKVIETKS--------EEELEDYMVEIEILATCNH-------------   68 (292)
T ss_pred             cchhhhhhheecCCCCeEEEEEEECCCCceEEEEEeccCC--------HHHHHHHHHHHHHHHhCCC-------------
Confidence            4577999999999999999999      789999987542        3445678899999999998             


Q ss_pred             ccccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc----cCCHHHHHHHHHHHHHH
Q psy9184         333 ELLKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK----YRSPNQTYAMILQVVFS  408 (562)
Q Consensus       333 ~l~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~----~l~e~~i~~I~~QIl~a  408 (562)
                                   ||++++++.+..             ++..|+||||+.||.+...+.    .+++..+..++.||+.|
T Consensus        69 -------------~~i~~~~~~~~~-------------~~~~~lv~e~~~~~~l~~~~~~~~~~l~~~~~~~~~~ql~~~  122 (292)
T cd06644          69 -------------PYIVKLLGAFYW-------------DGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVICRQMLEA  122 (292)
T ss_pred             -------------CcEeeeEEEEEe-------------CCeEEEEEecCCCCcHHHHHHhhcCCCCHHHHHHHHHHHHHH
Confidence                         999999988864             558999999999887654432    37899999999999999


Q ss_pred             HHHHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecC-----CcEEEeecCCCccc
Q psy9184         409 LAVAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVG-----EKICYYDLSQDEEL  483 (562)
Q Consensus       409 L~yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~-----~g~v~~~l~~~pel  483 (562)
                      |.|||+ .+|+||||||+||+++.++                    .++|+|||++.....     .....+..|.+||+
T Consensus       123 l~~lH~-~~i~H~dlkp~Nili~~~~--------------------~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~  181 (292)
T cd06644         123 LQYLHS-MKIIHRDLKAGNVLLTLDG--------------------DIKLADFGVSAKNVKTLQRRDSFIGTPYWMAPEV  181 (292)
T ss_pred             HHHHhc-CCeeecCCCcceEEEcCCC--------------------CEEEccCccceeccccccccceecCCccccCcee
Confidence            999999 7999999999999998776                    799999999876433     22234557889998


Q ss_pred             cCC------CCCcHHHHHHHh
Q psy9184         484 FEG------EGDYQFDMYRMM  498 (562)
Q Consensus       484 F~g------~~~~q~dIy~lm  498 (562)
                      +.+      ..+...|+|++.
T Consensus       182 ~~~~~~~~~~~~~~~Dv~slG  202 (292)
T cd06644         182 VMCETMKDTPYDYKADIWSLG  202 (292)
T ss_pred             eccccccCCCCCchhhhHhHH
Confidence            753      234458998763

Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.

>PRK13184 pknD serine/threonine-protein kinase; Reviewed

Probab=99.90  E-value=1.1e-23  Score=242.65  Aligned_cols=173  Identities=17%  Similarity=0.185  Sum_probs=141.6

Q ss_pred             CCCceeeeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCccccc
Q psy9184         261 SALKNCKKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTEL  334 (562)
Q Consensus       261 ~~y~~~~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~l  334 (562)
                      ++|++.++||+|+||.||+|      +.||+|++....     .......+++.+|+.+++.++|               
T Consensus         2 grYeIi~~LGkGgfG~VYlA~d~~tg~~VAIK~I~~~l-----~~~e~~~~rflrEi~ILs~L~H---------------   61 (932)
T PRK13184          2 QRYDIIRLIGKGGMGEVYLAYDPVCSRRVALKKIREDL-----SENPLLKKRFLREAKIAADLIH---------------   61 (932)
T ss_pred             CCeEEEEEEecCCCEEEEEEEECCCCcEEEEEEECccc-----ccCHHHHHHHHHHHHHHHhCCC---------------
Confidence            57999999999999999999      789999997543     1223445678999999999998               


Q ss_pred             ccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc--------------cCCHHHHHH
Q psy9184         335 LKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK--------------YRSPNQTYA  400 (562)
Q Consensus       335 ~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~--------------~l~e~~i~~  400 (562)
                                 |||+++++.+.+             ++..|+||||++||++.+.+.              .++...+..
T Consensus        62 -----------PNIVkl~~v~~d-------------~~~lyLVMEY~eGGSL~~lL~s~~~~~~l~e~~~~~lsv~~iL~  117 (932)
T PRK13184         62 -----------PGIVPVYSICSD-------------GDPVYYTMPYIEGYTLKSLLKSVWQKESLSKELAEKTSVGAFLS  117 (932)
T ss_pred             -----------cCcCeEEEEEee-------------CCEEEEEEEcCCCCCHHHHHHHhhhccccchhhhcccCHHHHHH
Confidence                       999999988865             558999999999998765442              144567889


Q ss_pred             HHHHHHHHHHHHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecC-----------
Q psy9184         401 MILQVVFSLAVAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVG-----------  469 (562)
Q Consensus       401 I~~QIl~aL~yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~-----------  469 (562)
                      ++.||+.||+|||+ .||+||||||+|||++.++                    .++|+|||+|+....           
T Consensus       118 I~~QIa~AL~yLHs-~GIIHRDLKPeNILLd~dg--------------------~vKLiDFGLAk~i~~~~~~~~~l~~~  176 (932)
T PRK13184        118 IFHKICATIEYVHS-KGVLHRDLKPDNILLGLFG--------------------EVVILDWGAAIFKKLEEEDLLDIDVD  176 (932)
T ss_pred             HHHHHHHHHHHHHH-CCccccCCchheEEEcCCC--------------------CEEEEecCcceecccccccccccccc
Confidence            99999999999999 7999999999999999886                    699999999987621           


Q ss_pred             ------------CcEEEeecCCCccccCC-CCCcHHHHHHHh
Q psy9184         470 ------------EKICYYDLSQDEELFEG-EGDYQFDMYRMM  498 (562)
Q Consensus       470 ------------~g~v~~~l~~~pelF~g-~~~~q~dIy~lm  498 (562)
                                  ...+++..|++||.+.+ ..+.+.|||++.
T Consensus       177 ~~~s~~s~~t~~g~~vGT~~YmAPE~l~g~~~S~kSDIWSLG  218 (932)
T PRK13184        177 ERNICYSSMTIPGKIVGTPDYMAPERLLGVPASESTDIYALG  218 (932)
T ss_pred             cccccccccccCCCCCCCCCCCCHHHhcCCCCCcHhHHHHHH
Confidence                        11346778999998876 456668998864

>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases

Probab=99.90  E-value=3.9e-23  Score=206.40  Aligned_cols=171  Identities=20%  Similarity=0.270  Sum_probs=140.7

Q ss_pred             CCCCCceeeeeeccCceEEEEE-----eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCcccc
Q psy9184         259 PSSALKNCKKIGEGVYGEVFKL-----NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTE  333 (562)
Q Consensus       259 ~~~~y~~~~~LG~GsfG~Vyka-----~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~  333 (562)
                      +.++|++.+.||+|+||.||+|     ..||+|.+....         ...+.+.+|+.+++.++|              
T Consensus         4 ~~~~~~~~~~lg~g~~~~v~~~~~~~~~~v~iK~~~~~~---------~~~~~~~~e~~~l~~l~h--------------   60 (261)
T cd05068           4 DRTSIQLLRKLGAGQFGEVWEGLWNNTTPVAVKTLKPGT---------MDPKDFLAEAQIMKKLRH--------------   60 (261)
T ss_pred             chhheeeEEEecccCCccEEEEEecCCeEEEEEeeCCCc---------ccHHHHHHHHHHHHHCCC--------------
Confidence            3467899999999999999999     689999987542         113467889999999998              


Q ss_pred             cccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc-----cCCHHHHHHHHHHHHHH
Q psy9184         334 LLKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK-----YRSPNQTYAMILQVVFS  408 (562)
Q Consensus       334 l~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~-----~l~e~~i~~I~~QIl~a  408 (562)
                                  |||+++++++..             .+..|++|||+.+|++.+.+.     .+++.++..++.|++.|
T Consensus        61 ------------~~i~~~~~~~~~-------------~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~  115 (261)
T cd05068          61 ------------PKLIQLYAVCTL-------------EEPIYIVTELMKYGSLLEYLQGGAGRALKLPQLIDMAAQVASG  115 (261)
T ss_pred             ------------CCccceeEEEec-------------CCCeeeeeecccCCcHHHHHhccCCCCCCHHHHHHHHHHHHHH
Confidence                        999999988764             457899999999998876653     37899999999999999


Q ss_pred             HHHHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecCC------cEEEeecCCCcc
Q psy9184         409 LAVAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVGE------KICYYDLSQDEE  482 (562)
Q Consensus       409 L~yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~~------g~v~~~l~~~pe  482 (562)
                      |.|||+ .||+||||||+||+++.++                    .++|+|||+++.....      +..+...|++||
T Consensus       116 l~~lH~-~~i~H~dl~p~Nil~~~~~--------------------~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE  174 (261)
T cd05068         116 MAYLEA-QNYIHRDLAARNVLVGENN--------------------ICKVADFGLARVIKEDIYEAREGAKFPIKWTAPE  174 (261)
T ss_pred             HHHHHh-CCeeeccCCcceEEEcCCC--------------------CEEECCcceEEEccCCcccccCCCcCceeccCcc
Confidence            999999 7999999999999999886                    6999999999876542      222234688999


Q ss_pred             ccCCC-CCcHHHHHHHh
Q psy9184         483 LFEGE-GDYQFDMYRMM  498 (562)
Q Consensus       483 lF~g~-~~~q~dIy~lm  498 (562)
                      .+.+. .+.+.|+|++.
T Consensus       175 ~~~~~~~~~~~Di~slG  191 (261)
T cd05068         175 AALYNRFSIKSDVWSFG  191 (261)
T ss_pred             ccccCCCCchhhHHHHH
Confidence            88763 45568998864

Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a

>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase

Probab=99.90  E-value=2.9e-23  Score=206.76  Aligned_cols=225  Identities=19%  Similarity=0.161  Sum_probs=159.6

Q ss_pred             CCCceeeeeeccCceEEEEE-----eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCcccccc
Q psy9184         261 SALKNCKKIGEGVYGEVFKL-----NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTELL  335 (562)
Q Consensus       261 ~~y~~~~~LG~GsfG~Vyka-----~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~l~  335 (562)
                      ++|++.+.||+|+||.||++     ..+|+|.+....         .....+.+|+.+++.++|                
T Consensus         4 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~a~K~~~~~~---------~~~~~~~~e~~~l~~l~h----------------   58 (256)
T cd05114           4 SELTFMKELGSGQFGVVHLGKWRAQIKVAIKAINEGA---------MSEEDFIEEAKVMMKLSH----------------   58 (256)
T ss_pred             HHcEEeeEecCCcCceEEEEEeccCceEEEEecccCC---------ccHHHHHHHHHHHHHCCC----------------
Confidence            45888999999999999999     589999876432         112467889999999998                


Q ss_pred             cccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc----cCCHHHHHHHHHHHHHHHHH
Q psy9184         336 KCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK----YRSPNQTYAMILQVVFSLAV  411 (562)
Q Consensus       336 ~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~----~l~e~~i~~I~~QIl~aL~y  411 (562)
                                |||+++++++..             .+..|+||||+++|++.+.+.    .+++..+..++.|++.||.|
T Consensus        59 ----------~~i~~~~~~~~~-------------~~~~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~  115 (256)
T cd05114          59 ----------PKLVQLYGVCTQ-------------QKPLYIVTEFMENGCLLNYLRQRQGKLSKDMLLSMCQDVCEGMEY  115 (256)
T ss_pred             ----------CCceeEEEEEcc-------------CCCEEEEEEcCCCCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHH
Confidence                      999999988865             457999999999998877664    37899999999999999999


Q ss_pred             HHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecCC------cEEEeecCCCccccC
Q psy9184         412 AEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVGE------KICYYDLSQDEELFE  485 (562)
Q Consensus       412 LH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~~------g~v~~~l~~~pelF~  485 (562)
                      ||+ .+|+||||||+||+++.++                    .++|+|||+++.....      +......|++||.+.
T Consensus       116 lH~-~~i~H~dl~p~ni~i~~~~--------------------~~kl~d~g~~~~~~~~~~~~~~~~~~~~~y~aPE~~~  174 (256)
T cd05114         116 LER-NSFIHRDLAARNCLVSSTG--------------------VVKVSDFGMTRYVLDDEYTSSSGAKFPVKWSPPEVFN  174 (256)
T ss_pred             HHH-CCccccccCcceEEEcCCC--------------------eEEECCCCCccccCCCceeccCCCCCchhhCChhhcc
Confidence            999 7999999999999998875                    7999999999865431      222234588999887


Q ss_pred             CC-CCcHHHHHHHhhcccCCCCC-CCCCCChhhhHHHHHHHHhhcccCCCCCCCchhHHHHHHHHHHHhcCCCcCcCC
Q psy9184         486 GE-GDYQFDMYRMMRKQCQNNWQ-NFTPKNNVFWIHYLVDKATCLKKGYQYLRAPRHQAFELLEELGQNALHFDSCYE  561 (562)
Q Consensus       486 g~-~~~q~dIy~lm~~~~~~~W~-~~~P~tn~~wl~yl~~~Ll~~~~~~~~~~~~~~~~~~~l~~l~~~~l~~~s~~~  561 (562)
                      +. .....|+|+..-... ..+. +..|+....-. -+...... +.....+..    ....+..+...++..+...|
T Consensus       175 ~~~~~~~~Di~s~G~~l~-el~~~g~~p~~~~~~~-~~~~~i~~-~~~~~~~~~----~~~~~~~li~~c~~~~p~~R  245 (256)
T cd05114         175 FSKYSSKSDVWSFGVLMW-EVFTEGKMPFEKKSNY-EVVEMISR-GFRLYRPKL----ASMTVYEVMYSCWHEKPEGR  245 (256)
T ss_pred             cCccchhhhhHHHHHHHH-HHHcCCCCCCCCCCHH-HHHHHHHC-CCCCCCCCC----CCHHHHHHHHHHccCCcccC
Confidence            63 455689988643332 2222 33344322101 11122222 111111111    12356777778887776655

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h

>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors

Probab=99.90  E-value=9.7e-24  Score=220.96  Aligned_cols=175  Identities=20%  Similarity=0.255  Sum_probs=138.4

Q ss_pred             CCCCCceeeeeeccCceEEEEE-----------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCC
Q psy9184         259 PSSALKNCKKIGEGVYGEVFKL-----------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENS  327 (562)
Q Consensus       259 ~~~~y~~~~~LG~GsfG~Vyka-----------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~  327 (562)
                      +.++|++.+.||+|+||.||+|           +.||+|++....       .....+.+.+|+.+++++.+        
T Consensus         5 ~~~~~~i~~~lG~G~fg~Vy~a~~~~~~~~~~~~~va~K~~~~~~-------~~~~~~~~~~E~~~~~~l~~--------   69 (337)
T cd05054           5 PRDRLKLGKPLGRGAFGKVIQASAFGIEKSASCRTVAVKMLKEGA-------TASEYKALMTELKILIHIGH--------   69 (337)
T ss_pred             CHHHhhhhcccccCcCceEEeccccccccccccceeeeeeccCCC-------CHHHHHHHHHHHHHHHhhcc--------
Confidence            4568999999999999999998           369999987542       13344677899999999944        


Q ss_pred             CCcccccccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc----------------
Q psy9184         328 TPCFTELLKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK----------------  391 (562)
Q Consensus       328 ~p~fv~l~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~----------------  391 (562)
                                       ||||+++++.+..            .+..++++|||+++|++.+.+.                
T Consensus        70 -----------------h~niv~~~~~~~~------------~~~~~~~v~ey~~~~~L~~~i~~~~~~~~~~~~~~~~~  120 (337)
T cd05054          70 -----------------HLNVVNLLGACTK------------PGGPLMVIVEYCKFGNLSNYLRSKRECFSPYRNKSTRK  120 (337)
T ss_pred             -----------------CcchhheeeeEec------------CCCCEEEEEecCCCCCHHHHHHhccccccccccccccc
Confidence                             4999999887754            2457899999999987754431                


Q ss_pred             ------------------------------------------------cCCHHHHHHHHHHHHHHHHHHHhhCCeEeccC
Q psy9184         392 ------------------------------------------------YRSPNQTYAMILQVVFSLAVAEVELEFEHRDL  423 (562)
Q Consensus       392 ------------------------------------------------~l~e~~i~~I~~QIl~aL~yLH~~~~IiHRDL  423 (562)
                                                                      .+++..+..++.||+.||.|||+ .+|+||||
T Consensus       121 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~-~~ivHrDi  199 (337)
T cd05054         121 REMKQKEGKKQRLDSVSSSQSSASSGFIEDKSLSDVEEDEEGDELYKEPLTLEDLISYSFQVARGMEFLAS-RKCIHRDL  199 (337)
T ss_pred             cccccccccccccccCCccccccccccccCcchhhcccchhhhHHhhcCCCHHHHHHHHHHHHHHHHHHHh-CCeecCCC
Confidence                                                            36788899999999999999999 79999999


Q ss_pred             CCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecCC-------cEEEeecCCCccccCC-CCCcHHHHH
Q psy9184         424 HMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVGE-------KICYYDLSQDEELFEG-EGDYQFDMY  495 (562)
Q Consensus       424 KpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~~-------g~v~~~l~~~pelF~g-~~~~q~dIy  495 (562)
                      ||+|||++.++                    .++|+|||+++.....       ....+..|++||.+.+ ......|||
T Consensus       200 kp~Nill~~~~--------------------~vkL~DfG~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~  259 (337)
T cd05054         200 AARNILLSENN--------------------VVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPESIFDKVYTTQSDVW  259 (337)
T ss_pred             CcceEEEeCCC--------------------cEEEeccccchhcccCcchhhccCCCCCccccCcHHhcCCCCCccccHH
Confidence            99999999875                    7999999999875431       1222345889996655 556678998


Q ss_pred             HHh
Q psy9184         496 RMM  498 (562)
Q Consensus       496 ~lm  498 (562)
                      ++.
T Consensus       260 SlG  262 (337)
T cd05054         260 SFG  262 (337)
T ss_pred             HHH
Confidence            853

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto

>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases

Probab=99.90  E-value=2.8e-23  Score=213.69  Aligned_cols=229  Identities=17%  Similarity=0.183  Sum_probs=166.1

Q ss_pred             CCceeeeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCcccccc
Q psy9184         262 ALKNCKKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTELL  335 (562)
Q Consensus       262 ~y~~~~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~l~  335 (562)
                      +|+..+.||+|+||.||+|      +.||+|.+....     .........+..|+.+++.++|                
T Consensus         2 ~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~-----~~~~~~~~~~~~e~~~l~~l~~----------------   60 (316)
T cd05574           2 HFKKIKLLGKGDVGRVFLVRLKGTGKLFALKVLDKKE-----MIKRNKVKRVLTEQEILATLDH----------------   60 (316)
T ss_pred             ceEEeeeecCCccEEEEEEEEcCCCcEEEEEEEeccc-----cchHHHHHHHHHHHHHHHhCCC----------------
Confidence            5889999999999999999      799999998653     2223355678899999999998                


Q ss_pred             cccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc-----cCCHHHHHHHHHHHHHHHH
Q psy9184         336 KCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK-----YRSPNQTYAMILQVVFSLA  410 (562)
Q Consensus       336 ~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~-----~l~e~~i~~I~~QIl~aL~  410 (562)
                                |+|+++++.+..             +...|++|||+.||++.+.+.     .+++..+..++.||+.||.
T Consensus        61 ----------~~i~~~~~~~~~-------------~~~~~lv~e~~~~~~L~~~~~~~~~~~l~~~~~~~~~~qi~~~l~  117 (316)
T cd05574          61 ----------PFLPTLYASFQT-------------ETYLCLVMDYCPGGELFRLLQRQPGKCLSEEVARFYAAEVLLALE  117 (316)
T ss_pred             ----------CCchhheeeeec-------------CCEEEEEEEecCCCCHHHHHHhCCCCccCHHHHHHHHHHHHHHHH
Confidence                      999999988865             558999999999998766553     3789999999999999999


Q ss_pred             HHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecCC--------------------
Q psy9184         411 VAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVGE--------------------  470 (562)
Q Consensus       411 yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~~--------------------  470 (562)
                      |||+ .|++||||||+||+++.++                    .++|+|||++......                    
T Consensus       118 ~lH~-~~i~H~dlkp~Nili~~~~--------------------~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~  176 (316)
T cd05574         118 YLHL-LGIVYRDLKPENILLHESG--------------------HIMLSDFDLSKQSDVEPPPVSKALRKGSRRSSVNSI  176 (316)
T ss_pred             HHHH-CCeeccCCChHHeEEcCCC--------------------CEEEeecchhhccccccccccccccccccccccccc
Confidence            9999 7999999999999999876                    6999999998765321                    


Q ss_pred             --------------cEEEeecCCCccccCCC-CCcHHHHHHHhhcccCCCCCCCCCCChhhhHHHHHHHHhhcccCCCCC
Q psy9184         471 --------------KICYYDLSQDEELFEGE-GDYQFDMYRMMRKQCQNNWQNFTPKNNVFWIHYLVDKATCLKKGYQYL  535 (562)
Q Consensus       471 --------------g~v~~~l~~~pelF~g~-~~~q~dIy~lm~~~~~~~W~~~~P~tn~~wl~yl~~~Ll~~~~~~~~~  535 (562)
                                    ..+++..|++||++.+. .....|||++ |......+.+..|+.....-..+.. .......++..
T Consensus       177 ~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Di~sl-G~ll~~l~~g~~pf~~~~~~~~~~~-~~~~~~~~~~~  254 (316)
T cd05574         177 PSETFSEEPSFRSNSFVGTEEYIAPEVISGDGHGSAVDWWTL-GILLYEMLYGTTPFKGSNRDETFSN-ILKKEVTFPGS  254 (316)
T ss_pred             chhhhcccccCCCCCCcCccCCcCHHHHcCCCCCchHHHHHH-HHHHHHHhhCCCCCCCCchHHHHHH-HhcCCccCCCc
Confidence                          11335568889887664 4455899886 3333345556666543332222211 12201112211


Q ss_pred             CCchhHHHHHHHHHHHhcCCCcCcCC
Q psy9184         536 RAPRHQAFELLEELGQNALHFDSCYE  561 (562)
Q Consensus       536 ~~~~~~~~~~l~~l~~~~l~~~s~~~  561 (562)
                      .    ..-..+.+|.+.||..+...|
T Consensus       255 ~----~~~~~~~~li~~~l~~~p~~R  276 (316)
T cd05574         255 P----PVSSSARDLIRKLLVKDPSKR  276 (316)
T ss_pred             c----ccCHHHHHHHHHHccCCHhHC
Confidence            1    124567777788877666554

Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin

>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1

Probab=99.90  E-value=1.7e-23  Score=211.78  Aligned_cols=227  Identities=15%  Similarity=0.140  Sum_probs=158.9

Q ss_pred             CCCceeeeeeccCceEEEEE----------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCc
Q psy9184         261 SALKNCKKIGEGVYGEVFKL----------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPC  330 (562)
Q Consensus       261 ~~y~~~~~LG~GsfG~Vyka----------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~  330 (562)
                      ++|++.+.||+|+||.||+|          ..+|+|.+....       .......+.+|+.+++.+.|           
T Consensus         5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~ik~~~~~~-------~~~~~~~~~~E~~~l~~l~h-----------   66 (283)
T cd05090           5 SAVRFMEELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDIN-------NPQQWGEFQQEASLMAELHH-----------   66 (283)
T ss_pred             hhceeeeeccccCCcceEEEEEecCCCCCcceEEEEeccCCC-------CHHHHHHHHHHHHHHhhCCC-----------
Confidence            56889999999999999998          478999987532       23344678899999999998           


Q ss_pred             ccccccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc-------------------
Q psy9184         331 FTELLKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK-------------------  391 (562)
Q Consensus       331 fv~l~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~-------------------  391 (562)
                                     |||+++++.+..             .+..|+||||+.+|++.+.+.                   
T Consensus        67 ---------------~niv~~~~~~~~-------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~  118 (283)
T cd05090          67 ---------------PNIVCLLGVVTQ-------------EQPVCMLFEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVK  118 (283)
T ss_pred             ---------------CCeeeEEEEEec-------------CCceEEEEEcCCCCcHHHHHHhcCCCCccccccccccccc
Confidence                           999999988764             457899999999987765541                   


Q ss_pred             -cCCHHHHHHHHHHHHHHHHHHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecCC
Q psy9184         392 -YRSPNQTYAMILQVVFSLAVAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVGE  470 (562)
Q Consensus       392 -~l~e~~i~~I~~QIl~aL~yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~~  470 (562)
                       .+++.++..++.|++.||.|||+ .+|+||||||+|||++.++                    .++|+|||+++.....
T Consensus       119 ~~~~~~~~~~i~~~i~~al~~lH~-~~i~H~dlkp~nili~~~~--------------------~~kl~dfg~~~~~~~~  177 (283)
T cd05090         119 SSLDHGDFLHIAIQIAAGMEYLSS-HFFVHKDLAARNILIGEQL--------------------HVKISDLGLSREIYSA  177 (283)
T ss_pred             cccCHHHHHHHHHHHHHHHHHHHh-cCeehhccccceEEEcCCC--------------------cEEeccccccccccCC
Confidence             26788899999999999999999 7999999999999999875                    6999999999865431


Q ss_pred             -------cEEEeecCCCccccCC-CCCcHHHHHHHhhcccCCCCC-CCCCCChhhhHHHHHHHHhhcccCCCCCCCchhH
Q psy9184         471 -------KICYYDLSQDEELFEG-EGDYQFDMYRMMRKQCQNNWQ-NFTPKNNVFWIHYLVDKATCLKKGYQYLRAPRHQ  541 (562)
Q Consensus       471 -------g~v~~~l~~~pelF~g-~~~~q~dIy~lm~~~~~~~W~-~~~P~tn~~wl~yl~~~Ll~~~~~~~~~~~~~~~  541 (562)
                             ....+..|++||.+.+ ..+...|+|++.-. +...+. +..|+.... -.-+.+.... ...++.+.    .
T Consensus       178 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i-l~el~~~g~~p~~~~~-~~~~~~~~~~-~~~~~~~~----~  250 (283)
T cd05090         178 DYYRVQPKSLLPIRWMPPEAIMYGKFSSDSDIWSFGVV-LWEIFSFGLQPYYGFS-NQEVIEMVRK-RQLLPCSE----D  250 (283)
T ss_pred             cceecccCCCccceecChHHhccCCCCchhhhHHHHHH-HHHHHcCCCCCCCCCC-HHHHHHHHHc-CCcCCCCC----C
Confidence                   1222345789998765 45566899886433 223333 444442211 0111222222 22222111    1


Q ss_pred             HHHHHHHHHHhcCCCcCcCC
Q psy9184         542 AFELLEELGQNALHFDSCYE  561 (562)
Q Consensus       542 ~~~~l~~l~~~~l~~~s~~~  561 (562)
                      ....+.++...+++.+.+.|
T Consensus       251 ~~~~~~~li~~cl~~~p~~R  270 (283)
T cd05090         251 CPPRMYSLMTECWQEGPSRR  270 (283)
T ss_pred             CCHHHHHHHHHHcccCcccC
Confidence            12356667777777666554

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases

Probab=99.90  E-value=1.6e-23  Score=213.72  Aligned_cols=174  Identities=21%  Similarity=0.246  Sum_probs=138.6

Q ss_pred             CCCCCCceeeeeeccCceEEEEE--------------------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhc
Q psy9184         258 YPSSALKNCKKIGEGVYGEVFKL--------------------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKET  317 (562)
Q Consensus       258 ~~~~~y~~~~~LG~GsfG~Vyka--------------------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L  317 (562)
                      |+..+|++.++||+|+||.||+|                    ..||+|.+....       .......+.+|+.+++.+
T Consensus         2 ~~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~vavK~~~~~~-------~~~~~~~~~~ei~~l~~l   74 (295)
T cd05097           2 FPRQQLRLKEKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADV-------TKTARNDFLKEIKIMSRL   74 (295)
T ss_pred             CchHhCeehhccCCCCCceEEecccccchhhccccCcccCCCceEEEEEecCCCC-------CHHHHHHHHHHHHHHHhC
Confidence            35578999999999999999998                    148999987542       133446788999999999


Q ss_pred             CCccccCCCCCCcccccccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc------
Q psy9184         318 SDLQYRTENSTPCFTELLKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK------  391 (562)
Q Consensus       318 ~h~~~~~~n~~p~fv~l~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~------  391 (562)
                      +|                          ||++++++++..             .+..|+||||+.+|++.+.+.      
T Consensus        75 ~h--------------------------~~i~~~~~~~~~-------------~~~~~lv~e~~~~~~L~~~l~~~~~~~  115 (295)
T cd05097          75 KN--------------------------PNIIRLLGVCVS-------------DDPLCMITEYMENGDLNQFLSQREIES  115 (295)
T ss_pred             CC--------------------------CCcCeEEEEEcC-------------CCccEEEEecCCCCcHHHHHHhccccc
Confidence            98                          999999988864             457899999999997755442      


Q ss_pred             ---------cCCHHHHHHHHHHHHHHHHHHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEecc
Q psy9184         392 ---------YRSPNQTYAMILQVVFSLAVAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFT  462 (562)
Q Consensus       392 ---------~l~e~~i~~I~~QIl~aL~yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFG  462 (562)
                               .+++..+..++.||+.||.|||+ .+++||||||+|||++.++                    .+||+|||
T Consensus       116 ~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~-~~i~H~dlkp~Nill~~~~--------------------~~kl~dfg  174 (295)
T cd05097         116 TFTHANNIPSVSIANLLYMAVQIASGMKYLAS-LNFVHRDLATRNCLVGNHY--------------------TIKIADFG  174 (295)
T ss_pred             cccccccCCcccHHHHHHHHHHHHHHHHHHHh-cCeeccccChhhEEEcCCC--------------------cEEecccc
Confidence                     25788899999999999999999 7999999999999998775                    69999999


Q ss_pred             ceeeecCCc-------EEEeecCCCccccCC-CCCcHHHHHHHh
Q psy9184         463 ISRCFVGEK-------ICYYDLSQDEELFEG-EGDYQFDMYRMM  498 (562)
Q Consensus       463 LSr~~~~~g-------~v~~~l~~~pelF~g-~~~~q~dIy~lm  498 (562)
                      +++......       ......|++||.+.+ ......|+|++.
T Consensus       175 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG  218 (295)
T cd05097         175 MSRNLYSGDYYRIQGRAVLPIRWMAWESILLGKFTTASDVWAFG  218 (295)
T ss_pred             cccccccCcceeccCcCcCceeecChhhhccCCcCchhhHHHHH
Confidence            998654321       122346788887654 456668998863

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including

>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains

Probab=99.90  E-value=4.9e-23  Score=203.97  Aligned_cols=227  Identities=18%  Similarity=0.219  Sum_probs=165.1

Q ss_pred             CCceeeeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCcccccc
Q psy9184         262 ALKNCKKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTELL  335 (562)
Q Consensus       262 ~y~~~~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~l~  335 (562)
                      +|...+.||+|+||.||+|      ..||+|.+....      ........+.+|+.+++.++|                
T Consensus         1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~------~~~~~~~~~~~e~~~l~~l~h----------------   58 (256)
T cd08529           1 DFEILNKIGKGSFGVVFKVVRKADKRVYAMKQIDLSK------MNRREREEAIDEARVLAKLDS----------------   58 (256)
T ss_pred             CceEeEEecCCCCeEEEEEEEcCCCcEEEEEEeehhh------CCHHHHHHHHHHHHHHHhcCC----------------
Confidence            3778899999999999999      789999988653      123445678899999999998                


Q ss_pred             cccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc-----cCCHHHHHHHHHHHHHHHH
Q psy9184         336 KCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK-----YRSPNQTYAMILQVVFSLA  410 (562)
Q Consensus       336 ~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~-----~l~e~~i~~I~~QIl~aL~  410 (562)
                                |||+++++.+..             ++..|+||||+.|+++.+.+.     .+++..++.++.||+.||.
T Consensus        59 ----------~~i~~~~~~~~~-------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~~l~~al~  115 (256)
T cd08529          59 ----------SYIIRYYESFLD-------------KGKLNIVMEYAENGDLHKLLKMQRGRPLPEDQVWRFFIQILLGLA  115 (256)
T ss_pred             ----------CCeehheeeecc-------------CCEEEEEEEeCCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHH
Confidence                      999999988875             458999999999998766542     3788999999999999999


Q ss_pred             HHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecCC-----cEEEeecCCCccccC
Q psy9184         411 VAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVGE-----KICYYDLSQDEELFE  485 (562)
Q Consensus       411 yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~~-----g~v~~~l~~~pelF~  485 (562)
                      |||+ .||+||||||+||+++.++                    .++|+|||+++.....     .......|.+||++.
T Consensus       116 ~lH~-~~i~h~dl~~~nili~~~~--------------------~~~l~df~~~~~~~~~~~~~~~~~~~~~y~aPE~~~  174 (256)
T cd08529         116 HLHS-KKILHRDIKSLNLFLDAYD--------------------NVKIGDLGVAKLLSDNTNFANTIVGTPYYLSPELCE  174 (256)
T ss_pred             HHHH-CCcccCCCCcceEEEeCCC--------------------CEEEcccccceeccCccchhhccccCccccCHHHhc
Confidence            9999 7999999999999999876                    7999999999876542     123455688999887


Q ss_pred             CC-CCcHHHHHHHhhcccCCCCCCCCCCChhhhHHHHHHHHhhcccCCCCCCCchhHHHHHHHHHHHhcCCCcCcCC
Q psy9184         486 GE-GDYQFDMYRMMRKQCQNNWQNFTPKNNVFWIHYLVDKATCLKKGYQYLRAPRHQAFELLEELGQNALHFDSCYE  561 (562)
Q Consensus       486 g~-~~~q~dIy~lm~~~~~~~W~~~~P~tn~~wl~yl~~~Ll~~~~~~~~~~~~~~~~~~~l~~l~~~~l~~~s~~~  561 (562)
                      +. .+...|+|++. ......+.+..|+.....-.. ..+...  ..++....   .....+.++.+.+++.+...|
T Consensus       175 ~~~~~~~~Di~slG-~il~~l~~g~~p~~~~~~~~~-~~~~~~--~~~~~~~~---~~~~~~~~~i~~~l~~~p~~R  244 (256)
T cd08529         175 DKPYNEKSDVWALG-VVLYECCTGKHPFDANNQGAL-ILKIIR--GVFPPVSQ---MYSQQLAQLIDQCLTKDYRQR  244 (256)
T ss_pred             CCCCCCccchHHHH-HHHHHHHhCCCCCCCCCHHHH-HHHHHc--CCCCCCcc---ccCHHHHHHHHHHccCCcccC
Confidence            64 45568998863 333334445555532221111 122222  11221111   224567778888888776655

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc

>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn

Probab=99.90  E-value=2.8e-23  Score=207.15  Aligned_cols=226  Identities=18%  Similarity=0.178  Sum_probs=161.2

Q ss_pred             CCCCceeeeeeccCceEEEEE-----eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCccccc
Q psy9184         260 SSALKNCKKIGEGVYGEVFKL-----NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTEL  334 (562)
Q Consensus       260 ~~~y~~~~~LG~GsfG~Vyka-----~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~l  334 (562)
                      .++|++.++||+|+||.||+|     ..||+|.+....         ...+.+.+|+.+++.++|               
T Consensus         5 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~v~iK~~~~~~---------~~~~~~~~e~~~l~~l~h---------------   60 (261)
T cd05072           5 RESIKLVKKLGAGQFGEVWMGYYNNSTKVAVKTLKPGT---------MSVQAFLEEANLMKTLQH---------------   60 (261)
T ss_pred             hHHeEEeeecCCcCCceEEEEEecCCceEEEEEccCCc---------hhHHHHHHHHHHHHhCCC---------------
Confidence            467999999999999999999     679999877532         123578899999999998               


Q ss_pred             ccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc-----cCCHHHHHHHHHHHHHHH
Q psy9184         335 LKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK-----YRSPNQTYAMILQVVFSL  409 (562)
Q Consensus       335 ~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~-----~l~e~~i~~I~~QIl~aL  409 (562)
                                 |||+++++.+..             .+..|++|||+.+|++.+.+.     .+++..+..++.||+.||
T Consensus        61 -----------~~i~~~~~~~~~-------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~l~~~l  116 (261)
T cd05072          61 -----------DKLVRLYAVVTK-------------EEPIYIITEYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGM  116 (261)
T ss_pred             -----------CCeeeEEEEEcC-------------CCCcEEEEecCCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHH
Confidence                       999999988764             457899999999998876653     377889999999999999


Q ss_pred             HHHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecCCc------EEEeecCCCccc
Q psy9184         410 AVAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVGEK------ICYYDLSQDEEL  483 (562)
Q Consensus       410 ~yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~~g------~v~~~l~~~pel  483 (562)
                      +|||+ .+++||||||+||+++.++                    .++|+|||+++......      ......|++||.
T Consensus       117 ~~LH~-~~i~H~dl~p~nili~~~~--------------------~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~  175 (261)
T cd05072         117 AYIER-KNYIHRDLRAANVLVSESL--------------------MCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEA  175 (261)
T ss_pred             HHHHH-CCeeccccchhhEEecCCC--------------------cEEECCCccceecCCCceeccCCCccceecCCHHH
Confidence            99999 7999999999999999876                    79999999998765421      122345888998


Q ss_pred             cCC-CCCcHHHHHHHhhcccCCCCC-CCCCCChhhhHHHHHHHHhhcccCCCCCCCchhHHHHHHHHHHHhcCCCcCcCC
Q psy9184         484 FEG-EGDYQFDMYRMMRKQCQNNWQ-NFTPKNNVFWIHYLVDKATCLKKGYQYLRAPRHQAFELLEELGQNALHFDSCYE  561 (562)
Q Consensus       484 F~g-~~~~q~dIy~lm~~~~~~~W~-~~~P~tn~~wl~yl~~~Ll~~~~~~~~~~~~~~~~~~~l~~l~~~~l~~~s~~~  561 (562)
                      +.+ ..+...|||++.-... ..+. +..|+.... ...+...+.. ...++...    ..-..+.++...++..+...|
T Consensus       176 ~~~~~~~~~~Di~slG~~l~-~l~t~g~~p~~~~~-~~~~~~~~~~-~~~~~~~~----~~~~~~~~li~~~l~~~p~~R  248 (261)
T cd05072         176 INFGSFTIKSDVWSFGILLY-EIVTYGKIPYPGMS-NSDVMSALQR-GYRMPRME----NCPDELYDIMKTCWKEKAEER  248 (261)
T ss_pred             hccCCCChhhhhhhhHHHHH-HHHccCCCCCCCCC-HHHHHHHHHc-CCCCCCCC----CCCHHHHHHHHHHccCCcccC
Confidence            765 3455689988643332 2222 444442211 1112222222 22221111    112356667777777766554

Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa

>KOG0607|consensus

Probab=99.90  E-value=1.8e-24  Score=217.55  Aligned_cols=182  Identities=18%  Similarity=0.252  Sum_probs=145.5

Q ss_pred             eeeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCcccccccccc
Q psy9184         266 CKKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTELLKCSC  339 (562)
Q Consensus       266 ~~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~l~~~~i  339 (562)
                      .+.||+|+||.|-.|      ..||||+|.+..        .....++++|++++..++.                    
T Consensus        83 ~e~LGeGAyasVqtcv~i~t~~EYAVKiidKq~--------gHsR~RvfREVe~f~~Cqg--------------------  134 (463)
T KOG0607|consen   83 SELLGEGAYASVQTCVSIQTGKEYAVKIIDKQP--------GHSRSRVFREVETFYQCQG--------------------  134 (463)
T ss_pred             HHHhcCccceeeeeeeeeccchhhhhhhhhcCC--------chHHHHHHHHHHHHHHhcC--------------------
Confidence            378999999999999      899999998763        3345689999999999987                    


Q ss_pred             cCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCcccccc---CCHHHHHHHHHHHHHHHHHHHhhC
Q psy9184         340 VRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIKY---RSPNQTYAMILQVVFSLAVAEVEL  416 (562)
Q Consensus       340 v~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~~---l~e~~i~~I~~QIl~aL~yLH~~~  416 (562)
                           |+||+.++++|++             +...|||||.+.||.++.+++.   |++.++..+++.|+.||.|||. .
T Consensus       135 -----h~nilqLiefFEd-------------d~~FYLVfEKm~GGplLshI~~~~~F~E~EAs~vvkdia~aLdFlH~-k  195 (463)
T KOG0607|consen  135 -----HKNILQLIEFFED-------------DTRFYLVFEKMRGGPLLSHIQKRKHFNEREASRVVKDIASALDFLHT-K  195 (463)
T ss_pred             -----CccHHHHHHHhcc-------------cceEEEEEecccCchHHHHHHHhhhccHHHHHHHHHHHHHHHHHHhh-c
Confidence                 8999999999997             6699999999999999999964   9999999999999999999999 5


Q ss_pred             CeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecC------------CcEEEeecCCCccc-
Q psy9184         417 EFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVG------------EKICYYDLSQDEEL-  483 (562)
Q Consensus       417 ~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~------------~g~v~~~l~~~pel-  483 (562)
                      ||.||||||+|||-...+.-.                 -||||||.|......            ...++.--||+||+ 
T Consensus       196 gIAHRDlKPENiLC~~pn~vs-----------------PvKiCDfDLgSg~k~~~~~spastP~L~tPvGSAEfMAPEVV  258 (463)
T KOG0607|consen  196 GIAHRDLKPENILCESPNKVS-----------------PVKICDFDLGSGIKLNNDCSPASTPELLTPVGSAEFMAPEVV  258 (463)
T ss_pred             CcccccCCccceeecCCCCcC-----------------ceeeeccccccccccCCCCCCCCCccccCcccchhhcchhHH
Confidence            999999999999998765311                 499999988765432            23344556789985 


Q ss_pred             --cCCC---CCcHHHHHHHhhcccCCCCCCCCCC
Q psy9184         484 --FEGE---GDYQFDMYRMMRKQCQNNWQNFTPK  512 (562)
Q Consensus       484 --F~g~---~~~q~dIy~lm~~~~~~~W~~~~P~  512 (562)
                        |.+.   ++-.+|+|++ |..++.+..++.||
T Consensus       259 d~fv~qA~~YDKrCDlwSL-GvIlYImLsGYpPF  291 (463)
T KOG0607|consen  259 DVFVDQATFYDKRCDLWSL-GVILYIMLSGYPPF  291 (463)
T ss_pred             hhhccccccccccccHHHH-HHHHHHHHhCCCCc
Confidence              5553   3444888774 33333444444444

>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8

Probab=99.90  E-value=1.4e-23  Score=215.94  Aligned_cols=168  Identities=20%  Similarity=0.290  Sum_probs=131.1

Q ss_pred             eeeeeccCceEEEEE--------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCcccccccc
Q psy9184         266 CKKIGEGVYGEVFKL--------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTELLKC  337 (562)
Q Consensus       266 ~~~LG~GsfG~Vyka--------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~l~~~  337 (562)
                      .++||+|+||.||+|        ..||+|.+.....          ...+.+|+.+++.++|                  
T Consensus         6 ~~~lG~G~~g~Vy~~~~~~~~~~~~~aiK~~~~~~~----------~~~~~~E~~~l~~l~h------------------   57 (317)
T cd07868           6 GCKVGRGTYGHVYKAKRKDGKDDRDYALKQIEGTGI----------SMSACREIALLRELKH------------------   57 (317)
T ss_pred             ccccccCCCeEEEEEEEccCCCCceEEEEEECCCCC----------cHHHHHHHHHHHhcCC------------------
Confidence            478999999999999        5699999875421          1346789999999998                  


Q ss_pred             cccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc------------cCCHHHHHHHHHHH
Q psy9184         338 SCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK------------YRSPNQTYAMILQV  405 (562)
Q Consensus       338 ~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~------------~l~e~~i~~I~~QI  405 (562)
                              |||+++++.|....           +..+|++|||+.+ ++.+.+.            .+++..++.++.||
T Consensus        58 --------~niv~~~~~~~~~~-----------~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi  117 (317)
T cd07868          58 --------PNVISLQKVFLSHA-----------DRKVWLLFDYAEH-DLWHIIKFHRASKANKKPVQLPRGMVKSLLYQI  117 (317)
T ss_pred             --------CCCcceeeeEecCC-----------CcEEEEEEeccCC-CHHHHHHhcccccccCCcccCCHHHHHHHHHHH
Confidence                    99999998886422           4578999999964 3433221            37899999999999


Q ss_pred             HHHHHHHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecC--------CcEEEeec
Q psy9184         406 VFSLAVAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVG--------EKICYYDL  477 (562)
Q Consensus       406 l~aL~yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~--------~g~v~~~l  477 (562)
                      +.||.|||+ .||+||||||+|||+...+..                ...+||+|||+|+....        ...+++..
T Consensus       118 ~~al~~LH~-~~ivHrDlkp~Nil~~~~~~~----------------~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~t~~  180 (317)
T cd07868         118 LDGIHYLHA-NWVLHRDLKPANILVMGEGPE----------------RGRVKIADMGFARLFNSPLKPLADLDPVVVTFW  180 (317)
T ss_pred             HHHHHHHHh-CCEEcCCCCHHHEEEecCCCC----------------cCcEEEeecCceeccCCCCccccccCCcccccc
Confidence            999999999 799999999999999644211                01799999999987543        23456778


Q ss_pred             CCCccccCCC--CCcHHHHHHHh
Q psy9184         478 SQDEELFEGE--GDYQFDMYRMM  498 (562)
Q Consensus       478 ~~~pelF~g~--~~~q~dIy~lm  498 (562)
                      |++||++.+.  .+...|||++.
T Consensus       181 y~aPE~~~~~~~~~~~~DiwslG  203 (317)
T cd07868         181 YRAPELLLGARHYTKAIDIWAIG  203 (317)
T ss_pred             ccCCHHHcCCCCcCchhhHHHHH
Confidence            9999988764  45568998864

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p

>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like

Probab=99.90  E-value=7.2e-23  Score=206.59  Aligned_cols=170  Identities=21%  Similarity=0.326  Sum_probs=137.3

Q ss_pred             CCceeeeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCcccccc
Q psy9184         262 ALKNCKKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTELL  335 (562)
Q Consensus       262 ~y~~~~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~l~  335 (562)
                      +|.+.+.||+|+||.||+|      ..||+|.+.....      .......+.+|+.+++.++|                
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~------~~~~~~~~~~e~~~l~~l~h----------------   58 (285)
T cd07861           1 DYTKIEKIGEGTYGVVYKGRNKKTGQIVAMKKIRLESE------EEGVPSTAIREISLLKELQH----------------   58 (285)
T ss_pred             CceEeeEecccCceEEEEEEECCCCcEEEEEEeccccc------cCCchHHHHHHHHHHHhcCC----------------
Confidence            4788999999999999999      6899999876431      12223567789999999998                


Q ss_pred             cccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCcccc------ccCCHHHHHHHHHHHHHHH
Q psy9184         336 KCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDI------KYRSPNQTYAMILQVVFSL  409 (562)
Q Consensus       336 ~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l------~~l~e~~i~~I~~QIl~aL  409 (562)
                                |||+++++.+.+             ++.+|+||||+. |++...+      ..+++.+++.++.||+.||
T Consensus        59 ----------~~i~~~~~~~~~-------------~~~~~~v~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~L  114 (285)
T cd07861          59 ----------PNIVCLQDVLMQ-------------ESRLYLIFEFLS-MDLKKYLDSLPKGQYMDAELVKSYLYQILQGI  114 (285)
T ss_pred             ----------CCEeeeEEEEee-------------CCeEEEEEecCC-CCHHHHHhcCCCCCcCCHHHHHHHHHHHHHHH
Confidence                      999999998875             558999999997 4454443      2378999999999999999


Q ss_pred             HHHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecC-----CcEEEeecCCCcccc
Q psy9184         410 AVAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVG-----EKICYYDLSQDEELF  484 (562)
Q Consensus       410 ~yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~-----~g~v~~~l~~~pelF  484 (562)
                      .|||+ .+|+||||||+|||++.++                    .++|+|||+++....     .....+..|++||.+
T Consensus       115 ~~lH~-~~i~H~dl~p~nil~~~~~--------------------~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~  173 (285)
T cd07861         115 LFCHS-RRVLHRDLKPQNLLIDNKG--------------------VIKLADFGLARAFGIPVRVYTHEVVTLWYRAPEVL  173 (285)
T ss_pred             HHHHh-CCeeecCCCHHHEEEcCCC--------------------cEEECcccceeecCCCcccccCCcccccccChHHh
Confidence            99999 7999999999999999876                    799999999986542     122345678999988


Q ss_pred             CCC--CCcHHHHHHHh
Q psy9184         485 EGE--GDYQFDMYRMM  498 (562)
Q Consensus       485 ~g~--~~~q~dIy~lm  498 (562)
                      .+.  .....|+|++.
T Consensus       174 ~~~~~~~~~~Dv~slG  189 (285)
T cd07861         174 LGSPRYSTPVDIWSIG  189 (285)
T ss_pred             cCCCCcCcHHHHHHHH
Confidence            764  35568998863

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2

>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases

Probab=99.90  E-value=3.6e-23  Score=206.86  Aligned_cols=232  Identities=16%  Similarity=0.141  Sum_probs=157.5

Q ss_pred             CceeeeeeccCceEEEEE---------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCcccc
Q psy9184         263 LKNCKKIGEGVYGEVFKL---------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTE  333 (562)
Q Consensus       263 y~~~~~LG~GsfG~Vyka---------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~  333 (562)
                      |++.+.||+|+||.||+|         ..||+|+++...      ........+.+|+.+++.++|              
T Consensus         1 ~~~~~~lg~G~~g~v~~~~~~~~~~~~~~vaiK~~~~~~------~~~~~~~~~~~e~~~l~~l~h--------------   60 (273)
T cd05035           1 LKLGKILGEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDI------HTYSEIEEFLSEAACMKDFDH--------------   60 (273)
T ss_pred             CccccccCcCCCceEEEEEEecCCCCcceEEEEEeccCc------CCHHHHHHHHHHHHHHHhCCC--------------
Confidence            467899999999999998         359999988642      224445678999999999998              


Q ss_pred             cccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCcccc---------ccCCHHHHHHHHHH
Q psy9184         334 LLKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDI---------KYRSPNQTYAMILQ  404 (562)
Q Consensus       334 l~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l---------~~l~e~~i~~I~~Q  404 (562)
                                  |||+++++.+....       ........+++|||+++|++...+         ..+++..+..++.|
T Consensus        61 ------------~~iv~~~~~~~~~~-------~~~~~~~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~  121 (273)
T cd05035          61 ------------PNVMKLIGVCFEAS-------SLQKIPKPMVILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVD  121 (273)
T ss_pred             ------------CCeeeEEeeeccCC-------ccccCcccEEEEeccCCCCHHHHHHHhhccCCcccCCHHHHHHHHHH
Confidence                        89999888765421       011233589999999999775444         14789999999999


Q ss_pred             HHHHHHHHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecCCcE-------EEeec
Q psy9184         405 VVFSLAVAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVGEKI-------CYYDL  477 (562)
Q Consensus       405 Il~aL~yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~~g~-------v~~~l  477 (562)
                      ++.||.|||+ .+|+||||||+||+++.++                    .+||+|||+++.......       ..+..
T Consensus       122 i~~aL~~lH~-~~i~H~dlkp~Nil~~~~~--------------------~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~  180 (273)
T cd05035         122 IALGMEYLSN-RNFIHRDLAARNCMLREDM--------------------TVCVADFGLSKKIYSGDYYRQGRIAKMPVK  180 (273)
T ss_pred             HHHHHHHHHh-CCeeccccchheEEECCCC--------------------eEEECCccceeeccccccccccccccCCcc
Confidence            9999999999 7999999999999998876                    799999999987653211       11335


Q ss_pred             CCCccccCC-CCCcHHHHHHHhhcccCCCCC-CCCCCChhhhHHHHHHHHhhcccCCCCCCCchhHHHHHHHHHHHhcCC
Q psy9184         478 SQDEELFEG-EGDYQFDMYRMMRKQCQNNWQ-NFTPKNNVFWIHYLVDKATCLKKGYQYLRAPRHQAFELLEELGQNALH  555 (562)
Q Consensus       478 ~~~pelF~g-~~~~q~dIy~lm~~~~~~~W~-~~~P~tn~~wl~yl~~~Ll~~~~~~~~~~~~~~~~~~~l~~l~~~~l~  555 (562)
                      |++||.+.+ ..+...|||++.-... ..+. +..|+...... -+.+.+.. +..++.+.    .....+.++..++|.
T Consensus       181 ~~~pe~~~~~~~~~~~Dv~SlG~il~-el~~~g~~p~~~~~~~-~~~~~~~~-~~~~~~~~----~~~~~~~~li~~~l~  253 (273)
T cd05035         181 WIAIESLADRVYTSKSDVWAFGVTMW-EIATRGQTPYPGVENH-EIYDYLRH-GNRLKQPE----DCLDELYDLMYSCWR  253 (273)
T ss_pred             ccCHhhcccCCCCcccchHHHHHHHH-HHHhCCCCCCCCCCHH-HHHHHHHc-CCCCCCCc----CCCHHHHHHHHHHcC
Confidence            778887765 3455688888533322 2222 33343222111 11222222 11111111    124466777777887


Q ss_pred             CcCcCC
Q psy9184         556 FDSCYE  561 (562)
Q Consensus       556 ~~s~~~  561 (562)
                      .+...|
T Consensus       254 ~~p~~R  259 (273)
T cd05035         254 ADPKDR  259 (273)
T ss_pred             CChhhC
Confidence            776654

Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu

>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases

Probab=99.90  E-value=1.3e-23  Score=212.04  Aligned_cols=187  Identities=22%  Similarity=0.321  Sum_probs=149.0

Q ss_pred             CCCCCceeeeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCccc
Q psy9184         259 PSSALKNCKKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFT  332 (562)
Q Consensus       259 ~~~~y~~~~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv  332 (562)
                      |.++|++.+.||.|+||.||+|      ..+|+|++....        ....+.+.+|+.+++.++|             
T Consensus         3 ~~~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~--------~~~~~~~~~e~~~l~~l~h-------------   61 (280)
T cd06611           3 PNDIWEIIGELGDGAFGKVYKAQHKETGLFAAAKIIQIES--------EEELEDFMVEIDILSECKH-------------   61 (280)
T ss_pred             chhHHHHHHHhcCCCCceEEEEEEcCCCcEEEEEEEeeCC--------HHHHHHHHHHHHHHHhCCC-------------
Confidence            4577999999999999999999      789999987542        3445678899999999998             


Q ss_pred             ccccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc----cCCHHHHHHHHHHHHHH
Q psy9184         333 ELLKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK----YRSPNQTYAMILQVVFS  408 (562)
Q Consensus       333 ~l~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~----~l~e~~i~~I~~QIl~a  408 (562)
                                   |||+++++.+..             +...|+||||+++|++.+.+.    .+++.+++.++.|++.|
T Consensus        62 -------------~~i~~~~~~~~~-------------~~~~~lv~e~~~~~~L~~~~~~~~~~l~~~~~~~~~~ql~~~  115 (280)
T cd06611          62 -------------PNIVGLYEAYFY-------------ENKLWILIEFCDGGALDSIMLELERGLTEPQIRYVCRQMLEA  115 (280)
T ss_pred             -------------CceeEEEEEEec-------------CCeEEEEeeccCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHH
Confidence                         999999998875             558999999999987765543    38899999999999999


Q ss_pred             HHHHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecC-----CcEEEeecCCCccc
Q psy9184         409 LAVAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVG-----EKICYYDLSQDEEL  483 (562)
Q Consensus       409 L~yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~-----~g~v~~~l~~~pel  483 (562)
                      |.|||+ .+|+||||||+||+++.++                    .++|+|||++.....     .....+..|.+||.
T Consensus       116 l~~lh~-~~i~h~dl~p~nili~~~~--------------------~~~l~d~g~~~~~~~~~~~~~~~~~~~~y~~PE~  174 (280)
T cd06611         116 LNFLHS-HKVIHRDLKAGNILLTLDG--------------------DVKLADFGVSAKNKSTLQKRDTFIGTPYWMAPEV  174 (280)
T ss_pred             HHHHHH-CCcccCCCChhhEEECCCC--------------------CEEEccCccchhhcccccccceeecchhhcCHHH
Confidence            999999 7999999999999998886                    799999999876543     22345667889998


Q ss_pred             cCC------CCCcHHHHHHHhhcccCCCCCCCCCCCh
Q psy9184         484 FEG------EGDYQFDMYRMMRKQCQNNWQNFTPKNN  514 (562)
Q Consensus       484 F~g------~~~~q~dIy~lm~~~~~~~W~~~~P~tn  514 (562)
                      +.+      ..+..+|+|++ |......+.+..|+.+
T Consensus       175 ~~~~~~~~~~~~~~sDi~sl-G~il~~l~~g~~p~~~  210 (280)
T cd06611         175 VACETFKDNPYDYKADIWSL-GITLIELAQMEPPHHE  210 (280)
T ss_pred             HhhcccCCCCCCccccHHHH-HHHHHHHHhCCCCccc
Confidence            642      13445899886 3333344555556543

Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti

>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome

Probab=99.90  E-value=3.4e-23  Score=207.02  Aligned_cols=225  Identities=21%  Similarity=0.183  Sum_probs=162.3

Q ss_pred             CCCceeeeeeccCceEEEEE-----eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCcccccc
Q psy9184         261 SALKNCKKIGEGVYGEVFKL-----NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTELL  335 (562)
Q Consensus       261 ~~y~~~~~LG~GsfG~Vyka-----~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~l~  335 (562)
                      .+|.+.+.||+|+||.||+|     ..+|+|.+....         .....+.+|+.+++.++|                
T Consensus         4 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~aik~~~~~~---------~~~~~~~~e~~~l~~l~h----------------   58 (256)
T cd05113           4 KDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGS---------MSEDEFIEEAKVMMKLSH----------------   58 (256)
T ss_pred             HHeEEeeEecCcccceEEEEEecCCCcEEEEEcCCCc---------ccHHHHHHHHHHHhcCCC----------------
Confidence            56889999999999999999     469999987542         112467899999999998                


Q ss_pred             cccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc----cCCHHHHHHHHHHHHHHHHH
Q psy9184         336 KCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK----YRSPNQTYAMILQVVFSLAV  411 (562)
Q Consensus       336 ~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~----~l~e~~i~~I~~QIl~aL~y  411 (562)
                                |||+++++++..             .+..|++|||+.+|++.+.+.    .+++.+++.++.||+.||+|
T Consensus        59 ----------~~i~~~~~~~~~-------------~~~~~lv~e~~~~~~l~~~i~~~~~~~~~~~~~~~~~~i~~~l~~  115 (256)
T cd05113          59 ----------EKLVQLYGVCTK-------------QRPIYIVTEYMSNGCLLNYLREHGKRFQPSQLLEMCKDVCEGMAY  115 (256)
T ss_pred             ----------CCeeeEEEEEcc-------------CCCcEEEEEcCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHH
Confidence                      999999998864             446899999999998776553    37899999999999999999


Q ss_pred             HHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecCCc------EEEeecCCCccccC
Q psy9184         412 AEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVGEK------ICYYDLSQDEELFE  485 (562)
Q Consensus       412 LH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~~g------~v~~~l~~~pelF~  485 (562)
                      ||+ .||+||||||+|||++.++                    .+||+|||+++......      ......|++||.+.
T Consensus       116 lH~-~~i~H~dl~p~nili~~~~--------------------~~kl~d~g~~~~~~~~~~~~~~~~~~~~~y~~pe~~~  174 (256)
T cd05113         116 LES-KQFIHRDLAARNCLVDDQG--------------------CVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLL  174 (256)
T ss_pred             HHh-CCeeccccCcceEEEcCCC--------------------CEEECCCccceecCCCceeecCCCccChhhCCHHHHh
Confidence            999 7999999999999998876                    79999999998664321      12234578899887


Q ss_pred             C-CCCcHHHHHHHhhcccCCCCC-CCCCCChhhhHHHHHHHHhhcccCCCCCCCchhHHHHHHHHHHHhcCCCcCcCC
Q psy9184         486 G-EGDYQFDMYRMMRKQCQNNWQ-NFTPKNNVFWIHYLVDKATCLKKGYQYLRAPRHQAFELLEELGQNALHFDSCYE  561 (562)
Q Consensus       486 g-~~~~q~dIy~lm~~~~~~~W~-~~~P~tn~~wl~yl~~~Ll~~~~~~~~~~~~~~~~~~~l~~l~~~~l~~~s~~~  561 (562)
                      + ..+...|||++. ......|. +..|+.....-. +...... ......+..    ....+.++...+|..+...|
T Consensus       175 ~~~~~~~~Di~slG-~~l~~l~~~g~~p~~~~~~~~-~~~~~~~-~~~~~~~~~----~~~~~~~li~~cl~~~p~~R  245 (256)
T cd05113         175 YSKFSSKSDVWAFG-VLMWEVYSLGKMPYERFNNSE-TVEKVSQ-GLRLYRPHL----ASEKVYAIMYSCWHEKAEER  245 (256)
T ss_pred             cCcccchhHHHHHH-HHHHHHhcCCCCCcCcCCHHH-HHHHHhc-CCCCCCCCC----CCHHHHHHHHHHcCCCcccC
Confidence            5 455669998754 33333443 455553222111 1222233 222211111    13467777888888777655

Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds

>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor

Probab=99.90  E-value=3.7e-23  Score=208.64  Aligned_cols=174  Identities=20%  Similarity=0.218  Sum_probs=137.6

Q ss_pred             CCCCceeeeeeccCceEEEEE-----------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCC
Q psy9184         260 SSALKNCKKIGEGVYGEVFKL-----------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENST  328 (562)
Q Consensus       260 ~~~y~~~~~LG~GsfG~Vyka-----------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~  328 (562)
                      .++|++.+.||+|+||.||+|           ..||+|.+....       ......++.+|+.+++.++|         
T Consensus         5 ~~~~~~~~~ig~G~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~-------~~~~~~~~~~e~~~l~~l~~---------   68 (277)
T cd05062           5 REKITMSRELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEAA-------SMRERIEFLNEASVMKEFNC---------   68 (277)
T ss_pred             HHHceeeeeeccccCCeEEEEEeccCCCCCceeEEEEEeccccC-------CHHHHHHHHHHHHHHHhCCC---------
Confidence            467999999999999999987           369999876432       12334568899999999988         


Q ss_pred             CcccccccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCcccccc-------------CCH
Q psy9184         329 PCFTELLKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIKY-------------RSP  395 (562)
Q Consensus       329 p~fv~l~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~~-------------l~e  395 (562)
                                       |||+++++++..             ....++||||+.+|++.+.+..             +++
T Consensus        69 -----------------~~iv~~~~~~~~-------------~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~  118 (277)
T cd05062          69 -----------------HHVVRLLGVVSQ-------------GQPTLVIMELMTRGDLKSYLRSLRPEMENNPVQAPPSL  118 (277)
T ss_pred             -----------------CCeeeEEEEEcC-------------CCCeEEEEecCCCCCHHHHHHHcCccccccccccCCCH
Confidence                             999999988864             4578999999999977654431             456


Q ss_pred             HHHHHHHHHHHHHHHHHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecCC-----
Q psy9184         396 NQTYAMILQVVFSLAVAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVGE-----  470 (562)
Q Consensus       396 ~~i~~I~~QIl~aL~yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~~-----  470 (562)
                      ..+..++.|++.||.|||+ .+++||||||+|||++.++                    .++|+|||+++.....     
T Consensus       119 ~~~~~~~~~l~~~l~~lH~-~~~vH~dlkp~Nil~~~~~--------------------~~~l~dfg~~~~~~~~~~~~~  177 (277)
T cd05062         119 KKMIQMAGEIADGMAYLNA-NKFVHRDLAARNCMVAEDF--------------------TVKIGDFGMTRDIYETDYYRK  177 (277)
T ss_pred             HHHHHHHHHHHHHHHHHHH-CCcccCCcchheEEEcCCC--------------------CEEECCCCCccccCCcceeec
Confidence            7889999999999999999 7999999999999999876                    7999999999765321     


Q ss_pred             --cEEEeecCCCccccCC-CCCcHHHHHHHhhc
Q psy9184         471 --KICYYDLSQDEELFEG-EGDYQFDMYRMMRK  500 (562)
Q Consensus       471 --g~v~~~l~~~pelF~g-~~~~q~dIy~lm~~  500 (562)
                        ....+..|++||.+.+ ..+...|||++.-.
T Consensus       178 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~  210 (277)
T cd05062         178 GGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVV  210 (277)
T ss_pred             CCCCccCHhhcChhHhhcCCcCchhHHHHHHHH
Confidence              1122345889998765 45666899885433

Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh

>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1

Probab=99.90  E-value=4.2e-23  Score=211.03  Aligned_cols=171  Identities=20%  Similarity=0.207  Sum_probs=134.2

Q ss_pred             CCCceeeeeeccCceEEEEE--------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCccc
Q psy9184         261 SALKNCKKIGEGVYGEVFKL--------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFT  332 (562)
Q Consensus       261 ~~y~~~~~LG~GsfG~Vyka--------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv  332 (562)
                      ++|++.+.||+|+||.||+|        ..+|+|.++...       .....+.+.+|+.++.++.+             
T Consensus         2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~ik~~~~~~-------~~~~~~~~~~E~~~l~~l~~-------------   61 (297)
T cd05089           2 EDIKFEDVIGEGNFGQVIRAMIKKDGLKMNAAIKMLKEFA-------SENDHRDFAGELEVLCKLGH-------------   61 (297)
T ss_pred             ccceeeeeecCCCcceEEEEEecCCCCcceeEEEEccccC-------CHHHHHHHHHHHHHHHhhcC-------------
Confidence            46889999999999999999        246888876421       12334678899999999954             


Q ss_pred             ccccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc-------------------cC
Q psy9184         333 ELLKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK-------------------YR  393 (562)
Q Consensus       333 ~l~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~-------------------~l  393 (562)
                                  ||||+++++.+..             .+.+|++|||+++|++.+.+.                   .+
T Consensus        62 ------------hp~iv~~~~~~~~-------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l  116 (297)
T cd05089          62 ------------HPNIINLLGACEN-------------RGYLYIAIEYAPYGNLLDFLRKSRVLETDPAFAKEHGTASTL  116 (297)
T ss_pred             ------------CCchhheEEEEcc-------------CCcceEEEEecCCCcHHHHHHhccccccccccccccCccCCC
Confidence                        4999999988864             457899999999998765542                   27


Q ss_pred             CHHHHHHHHHHHHHHHHHHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecC----
Q psy9184         394 SPNQTYAMILQVVFSLAVAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVG----  469 (562)
Q Consensus       394 ~e~~i~~I~~QIl~aL~yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~----  469 (562)
                      ++..++.++.||+.||+|||+ .||+||||||+|||++.++                    .+||+|||++.....    
T Consensus       117 ~~~~~~~i~~qi~~al~~lH~-~~ivH~dlkp~Nill~~~~--------------------~~kl~dfg~~~~~~~~~~~  175 (297)
T cd05089         117 TSQQLLQFASDVATGMQYLSE-KQFIHRDLAARNVLVGENL--------------------ASKIADFGLSRGEEVYVKK  175 (297)
T ss_pred             CHHHHHHHHHHHHHHHHHHHH-CCcccCcCCcceEEECCCC--------------------eEEECCcCCCccccceecc
Confidence            788999999999999999999 7999999999999998875                    799999999874321    


Q ss_pred             CcEEEeecCCCccccCCC-CCcHHHHHHH
Q psy9184         470 EKICYYDLSQDEELFEGE-GDYQFDMYRM  497 (562)
Q Consensus       470 ~g~v~~~l~~~pelF~g~-~~~q~dIy~l  497 (562)
                      ........|++||.+.+. .+...|||++
T Consensus       176 ~~~~~~~~y~aPE~~~~~~~~~~~DvwSl  204 (297)
T cd05089         176 TMGRLPVRWMAIESLNYSVYTTKSDVWSF  204 (297)
T ss_pred             CCCCcCccccCchhhccCCCCchhhHHHH
Confidence            111112357889987653 4567899885

Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.

>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes

Probab=99.90  E-value=4.4e-23  Score=204.67  Aligned_cols=221  Identities=18%  Similarity=0.156  Sum_probs=155.4

Q ss_pred             eeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCccccccccccc
Q psy9184         267 KKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTELLKCSCV  340 (562)
Q Consensus       267 ~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~l~~~~iv  340 (562)
                      +.||+|+||.||+|      +.+|+|.+....       .......+.+|+.+++.++|                     
T Consensus         1 ~~lg~g~~g~vy~~~~~~~~~~~a~k~~~~~~-------~~~~~~~~~~e~~~l~~l~h---------------------   52 (252)
T cd05084           1 ERIGRGNFGEVFSGRLRADNTPVAVKSCRETL-------PPDLKAKFLQEARILKQYSH---------------------   52 (252)
T ss_pred             CccCcccCccEEEEEEecCCceEEEEecCccC-------CHHHHHHHHHHHHHHHhCCC---------------------
Confidence            36999999999999      679999876432       23344678899999999998                     


Q ss_pred             CCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc----cCCHHHHHHHHHHHHHHHHHHHhhC
Q psy9184         341 RGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK----YRSPNQTYAMILQVVFSLAVAEVEL  416 (562)
Q Consensus       341 ~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~----~l~e~~i~~I~~QIl~aL~yLH~~~  416 (562)
                           |||+++++++..             ....|+||||+.+|++.+.+.    .+++..++.++.|++.||.|||+ .
T Consensus        53 -----~~i~~~~~~~~~-------------~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~-~  113 (252)
T cd05084          53 -----PNIVRLIGVCTQ-------------KQPIYIVMELVQGGDFLTFLRTEGPRLKVKELIQMVENAAAGMEYLES-K  113 (252)
T ss_pred             -----CCcceEEEEEcC-------------CCCeEEEEeeccCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHh-C
Confidence                 999999988865             457899999999998776653    37899999999999999999999 7


Q ss_pred             CeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecCCcEE-------EeecCCCccccCC-CC
Q psy9184         417 EFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVGEKIC-------YYDLSQDEELFEG-EG  488 (562)
Q Consensus       417 ~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~~g~v-------~~~l~~~pelF~g-~~  488 (562)
                      +|+||||||+|||++.++                    .++|+|||+++........       ....|++||.+.+ ..
T Consensus       114 ~i~H~dl~p~nil~~~~~--------------------~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~  173 (252)
T cd05084         114 HCIHRDLAARNCLVTEKN--------------------VLKISDFGMSREEEDGVYASTGGMKQIPVKWTAPEALNYGRY  173 (252)
T ss_pred             CccccccchheEEEcCCC--------------------cEEECccccCcccccccccccCCCCCCceeecCchhhcCCCC
Confidence            999999999999998876                    7999999999864431100       0123788998765 45


Q ss_pred             CcHHHHHHHhhcccCCCCC-CCCCCChhhhHHHHHHHHhhcccCCCCCCCchhHHHHHHHHHHHhcCCCcCcCC
Q psy9184         489 DYQFDMYRMMRKQCQNNWQ-NFTPKNNVFWIHYLVDKATCLKKGYQYLRAPRHQAFELLEELGQNALHFDSCYE  561 (562)
Q Consensus       489 ~~q~dIy~lm~~~~~~~W~-~~~P~tn~~wl~yl~~~Ll~~~~~~~~~~~~~~~~~~~l~~l~~~~l~~~s~~~  561 (562)
                      ..+.|+|++.-.. ...|. +..|+...... .....+.. ......+.    ..-..+.+|...+|..+...|
T Consensus       174 ~~~~Dv~slG~il-~e~~~~~~~p~~~~~~~-~~~~~~~~-~~~~~~~~----~~~~~~~~li~~~l~~~p~~R  240 (252)
T cd05084         174 SSESDVWSFGILL-WEAFSLGAVPYANLSNQ-QTREAIEQ-GVRLPCPE----LCPDAVYRLMERCWEYDPGQR  240 (252)
T ss_pred             ChHHHHHHHHHHH-HHHHhCCCCCccccCHH-HHHHHHHc-CCCCCCcc----cCCHHHHHHHHHHcCCChhhC
Confidence            5668998854333 23342 44454322211 11121222 11111111    113456778888888777665

Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular

>KOG0604|consensus

Probab=99.90  E-value=2.2e-24  Score=215.58  Aligned_cols=233  Identities=14%  Similarity=0.183  Sum_probs=166.2

Q ss_pred             CCCCce-eeeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCccc
Q psy9184         260 SSALKN-CKKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFT  332 (562)
Q Consensus       260 ~~~y~~-~~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv  332 (562)
                      .++|.+ .++||-|-.|.|..|      +.+|+|++.-.             ....+|+++.-..+.             
T Consensus        60 tedY~is~qvLG~GinGkV~~C~~k~T~ekfALKvL~Ds-------------~KARrEVeLHw~~s~-------------  113 (400)
T KOG0604|consen   60 TEDYSISWQVLGAGINGKVVQCVHKRTQEKFALKVLLDS-------------PKARREVELHWMASG-------------  113 (400)
T ss_pred             hhhheehhhhhccccCCceEEEEeccchhhhHHHHHhcC-------------HHHHhHhhhhhhhcC-------------
Confidence            355654 378999999999999      88999988743             345688887666665             


Q ss_pred             ccccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCcccccc-----CCHHHHHHHHHHHHH
Q psy9184         333 ELLKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIKY-----RSPNQTYAMILQVVF  407 (562)
Q Consensus       333 ~l~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~~-----l~e~~i~~I~~QIl~  407 (562)
                                  |||||.++++|.+.         +-....+.+|||+++||+|+.+++.     ++|.++..|++||+.
T Consensus       114 ------------h~~iV~IidVyeNs---------~~~rkcLLiVmE~meGGeLfsriq~~g~~afTErea~eI~~qI~~  172 (400)
T KOG0604|consen  114 ------------HPHIVSIIDVYENS---------YQGRKCLLIVMECMEGGELFSRIQDRGDQAFTEREASEIMKQIGL  172 (400)
T ss_pred             ------------CCceEEeehhhhhh---------ccCceeeEeeeecccchHHHHHHHHcccccchHHHHHHHHHHHHH
Confidence                        79999999999863         2235578999999999999999963     999999999999999


Q ss_pred             HHHHHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecC----CcEEEeecCCCccc
Q psy9184         408 SLAVAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVG----EKICYYDLSQDEEL  483 (562)
Q Consensus       408 aL~yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~----~g~v~~~l~~~pel  483 (562)
                      |+.|||+ ++|.||||||+|+|...+...                 ..+||+|||+|+....    ...+++++|.+||+
T Consensus       173 Av~~lH~-~nIAHRDlKpENLLyt~t~~n-----------------a~lKLtDfGFAK~t~~~~~L~TPc~TPyYvaPev  234 (400)
T KOG0604|consen  173 AVRYLHS-MNIAHRDLKPENLLYTTTSPN-----------------APLKLTDFGFAKETQEPGDLMTPCFTPYYVAPEV  234 (400)
T ss_pred             HHHHHHh-cchhhccCChhheeeecCCCC-----------------cceEecccccccccCCCccccCCcccccccCHHH
Confidence            9999999 899999999999999988643                 2699999999998774    34567899999998


Q ss_pred             cCC-CCCcHHHHHHHhhcccCCCCCCCCCCC-hh---hhHHHHHHHHhhcccCCCCCCCchhHHHHHHHHHHHhcCCCcC
Q psy9184         484 FEG-EGDYQFDMYRMMRKQCQNNWQNFTPKN-NV---FWIHYLVDKATCLKKGYQYLRAPRHQAFELLEELGQNALHFDS  558 (562)
Q Consensus       484 F~g-~~~~q~dIy~lm~~~~~~~W~~~~P~t-n~---~wl~yl~~~Ll~~~~~~~~~~~~~~~~~~~l~~l~~~~l~~~s  558 (562)
                      ... .++..+|+|++. ...+...-+|.||- |.   +--+. ..+.......|+.+-  =...-+.-+.+++.+|.-+.
T Consensus       235 lg~eKydkscdmwSlg-VimYIlLCGyPPFYS~hg~aispgM-k~rI~~gqy~FP~pE--Ws~VSe~aKdlIR~LLkt~P  310 (400)
T KOG0604|consen  235 LGPEKYDKSCDMWSLG-VIMYILLCGYPPFYSNHGLAISPGM-KRRIRTGQYEFPEPE--WSCVSEAAKDLIRKLLKTEP  310 (400)
T ss_pred             hCchhcCCCCCccchh-HHHHHhhcCCCcccccCCccCChhH-HhHhhccCccCCChh--HhHHHHHHHHHHHHHhcCCc
Confidence            876 456557776642 22223334454541 11   11111 222222134444432  22235566667777775554


Q ss_pred             cCC
Q psy9184         559 CYE  561 (562)
Q Consensus       559 ~~~  561 (562)
                      ..|
T Consensus       311 teR  313 (400)
T KOG0604|consen  311 TER  313 (400)
T ss_pred             hhh
Confidence            433

>KOG0587|consensus

Probab=99.90  E-value=2.3e-23  Score=231.27  Aligned_cols=181  Identities=23%  Similarity=0.335  Sum_probs=156.2

Q ss_pred             CCCCCceeeeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCccc
Q psy9184         259 PSSALKNCKKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFT  332 (562)
Q Consensus       259 ~~~~y~~~~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv  332 (562)
                      +++.|++...||.|.||.||++      +..|+||+....         ..-+++..|.+||+.++|             
T Consensus        17 p~d~~ei~evig~Gtygkv~k~k~~~~~~~aa~kI~~~~~---------d~deEiE~eynil~~~~~-------------   74 (953)
T KOG0587|consen   17 PADIFEIIEVIGNGTYGKVYKGRHVKTGQLAAIKIMDPTE---------DEEEEIELEYNMLKKYSH-------------   74 (953)
T ss_pred             CCCccEEEEEEeeccceeEEEEeeeecCceeeeEeecCCc---------cccHHHHHHHHHHHhccC-------------
Confidence            6688999999999999999999      889999988653         112467789999999998             


Q ss_pred             ccccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc-----cCCHHHHHHHHHHHHH
Q psy9184         333 ELLKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK-----YRSPNQTYAMILQVVF  407 (562)
Q Consensus       333 ~l~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~-----~l~e~~i~~I~~QIl~  407 (562)
                                  |||++.+|++|...+      |  -.++++|||||||.||+.-+.++     .+.|..+..|++.++.
T Consensus        75 ------------hpnv~~fyg~~~k~~------~--~~~DqLWLVMEfC~gGSVTDLVKn~~g~rl~E~~IaYI~re~lr  134 (953)
T KOG0587|consen   75 ------------HPNVATFYGAFIKKD------P--GNGDQLWLVMEFCGGGSVTDLVKNTKGNRLKEEWIAYILREILR  134 (953)
T ss_pred             ------------CCCcceEEEEEEEec------C--CCCCeEEEEeeccCCccHHHHHhhhcccchhhHHHHHHHHHHHH
Confidence                        899999999988654      2  35789999999999998877765     3889999999999999


Q ss_pred             HHHHHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecC-----CcEEEeecCCCcc
Q psy9184         408 SLAVAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVG-----EKICYYDLSQDEE  482 (562)
Q Consensus       408 aL~yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~-----~g~v~~~l~~~pe  482 (562)
                      ||.+||. ..++|||||=.|||++.++                    .|||+|||+|..+..     ..|+++++||+||
T Consensus       135 gl~HLH~-nkviHRDikG~NiLLT~e~--------------------~VKLvDFGvSaQldsT~grRnT~iGtP~WMAPE  193 (953)
T KOG0587|consen  135 GLAHLHN-NKVIHRDIKGQNVLLTENA--------------------EVKLVDFGVSAQLDSTVGRRNTFIGTPYWMAPE  193 (953)
T ss_pred             HHHHHhh-cceeeecccCceEEEeccC--------------------cEEEeeeeeeeeeecccccccCcCCCcccccce
Confidence            9999999 7999999999999999998                    799999999998875     6799999999999


Q ss_pred             ccCCC------CCcHHHHHHHhhccc
Q psy9184         483 LFEGE------GDYQFDMYRMMRKQC  502 (562)
Q Consensus       483 lF~g~------~~~q~dIy~lm~~~~  502 (562)
                      +..+.      +++.+|+|++.-+.+
T Consensus       194 Viac~e~~d~tyd~R~D~WsLGITaI  219 (953)
T KOG0587|consen  194 VIACDESPDATYDYRSDLWSLGITAI  219 (953)
T ss_pred             eeecccCCCCCcccccchhhccceee
Confidence            98773      344599998766655

>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B

Probab=99.90  E-value=4.3e-23  Score=209.78  Aligned_cols=170  Identities=18%  Similarity=0.209  Sum_probs=138.5

Q ss_pred             CCCceeeeeeccCceEEEEE-----------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCC
Q psy9184         261 SALKNCKKIGEGVYGEVFKL-----------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTP  329 (562)
Q Consensus       261 ~~y~~~~~LG~GsfG~Vyka-----------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p  329 (562)
                      .+|.+.+.||+|+||.||++           ..+|+|.+....        ......+.+|+.++++++|          
T Consensus         5 ~~~~~~~~lg~G~~~~v~~~~~~~~~~~~~~~~~~ik~~~~~~--------~~~~~~~~~e~~~l~~l~h----------   66 (288)
T cd05093           5 HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDAS--------DNARKDFHREAELLTNLQH----------   66 (288)
T ss_pred             HHeeeccccCCcCCeeEEeeEeccCCCCCcceEEEEEecCCcC--------HHHHHHHHHHHHHHHhCCC----------
Confidence            56889999999999999998           348888886432        3445678899999999998          


Q ss_pred             cccccccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc----------------cC
Q psy9184         330 CFTELLKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK----------------YR  393 (562)
Q Consensus       330 ~fv~l~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~----------------~l  393 (562)
                                      |+|+++++.+..             .+.+|+||||+++|++.+.+.                .+
T Consensus        67 ----------------~~i~~~~~~~~~-------------~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~l  117 (288)
T cd05093          67 ----------------EHIVKFYGVCVE-------------GDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNRPAEL  117 (288)
T ss_pred             ----------------CCcceEEEEEec-------------CCccEEEEEcCCCCCHHHHHHHcCCccccccccCCCCCC
Confidence                            999999988864             558899999999997765442                27


Q ss_pred             CHHHHHHHHHHHHHHHHHHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecCCc--
Q psy9184         394 SPNQTYAMILQVVFSLAVAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVGEK--  471 (562)
Q Consensus       394 ~e~~i~~I~~QIl~aL~yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~~g--  471 (562)
                      ++..+..++.||+.||+|||+ .||+||||||+|||++.++                    .++|+|||+++......  
T Consensus       118 ~~~~~~~~~~ql~~aL~~lH~-~~i~H~dlkp~Nili~~~~--------------------~~kl~dfg~~~~~~~~~~~  176 (288)
T cd05093         118 TQSQMLHIAQQIAAGMVYLAS-QHFVHRDLATRNCLVGENL--------------------LVKIGDFGMSRDVYSTDYY  176 (288)
T ss_pred             CHHHHHHHHHHHHHHHHHHHh-CCeeecccCcceEEEccCC--------------------cEEeccCCccccccCCcee
Confidence            899999999999999999999 7999999999999998876                    79999999998654321  


Q ss_pred             -----EEEeecCCCccccCCC-CCcHHHHHHHh
Q psy9184         472 -----ICYYDLSQDEELFEGE-GDYQFDMYRMM  498 (562)
Q Consensus       472 -----~v~~~l~~~pelF~g~-~~~q~dIy~lm  498 (562)
                           +.....|++||.+.+. .+..+|||+++
T Consensus       177 ~~~~~~~~~~~y~aPE~~~~~~~~~~sDiwslG  209 (288)
T cd05093         177 RVGGHTMLPIRWMPPESIMYRKFTTESDVWSLG  209 (288)
T ss_pred             ecCCCCCccccccCHHHhccCCCCchhhHHHHH
Confidence                 1223468899988764 45568998853

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly

>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7

Probab=99.90  E-value=5.3e-23  Score=205.04  Aligned_cols=172  Identities=21%  Similarity=0.321  Sum_probs=140.3

Q ss_pred             CCCceeeeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCccccc
Q psy9184         261 SALKNCKKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTEL  334 (562)
Q Consensus       261 ~~y~~~~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~l  334 (562)
                      ++|++.+.||+|+||.||+|      +.||+|.++...     .........+.+|+.+++.++|               
T Consensus         2 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~-----~~~~~~~~~~~~ei~~l~~~~~---------------   61 (267)
T cd08224           2 GNFKIEKKIGKGQFSVVYKAICLLDGRVVALKKVQIFE-----MMDAKARQDCLKEIDLLKQLDH---------------   61 (267)
T ss_pred             CceeeeeeeccCCceEEEEEEEcCCCCEEEEEEeeccc-----ccchhhHHHHHHHHHHHHhCCC---------------
Confidence            46899999999999999999      789999987543     1123334678899999999998               


Q ss_pred             ccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc-------cCCHHHHHHHHHHHHH
Q psy9184         335 LKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK-------YRSPNQTYAMILQVVF  407 (562)
Q Consensus       335 ~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~-------~l~e~~i~~I~~QIl~  407 (562)
                                 ++++++++.|..             ++..++||||+++|++...+.       .+++.++..++.||+.
T Consensus        62 -----------~~i~~~~~~~~~-------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~  117 (267)
T cd08224          62 -----------PNVIKYLASFIE-------------NNELNIVLELADAGDLSRMIKHFKKQKRLIPERTIWKYFVQLCS  117 (267)
T ss_pred             -----------CCeeeeeeeeec-------------CCeEEEEEecCCCCCHHHHHHHhcccCCCcCHHHHHHHHHHHHH
Confidence                       999999998875             458899999999998865542       2789999999999999


Q ss_pred             HHHHHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecCC-----cEEEeecCCCcc
Q psy9184         408 SLAVAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVGE-----KICYYDLSQDEE  482 (562)
Q Consensus       408 aL~yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~~-----g~v~~~l~~~pe  482 (562)
                      ||.|||+ .||+||||||+||+++.++                    .++|+|||+++.....     .......|.+||
T Consensus       118 ~l~~lh~-~~i~h~dl~p~nil~~~~~--------------------~~~l~d~~~~~~~~~~~~~~~~~~~~~~y~apE  176 (267)
T cd08224         118 ALEHMHS-KRIMHRDIKPANVFITATG--------------------VVKLGDLGLGRFFSSKTTAAHSLVGTPYYMSPE  176 (267)
T ss_pred             HHHHHHh-CCEecCCcChhhEEECCCC--------------------cEEEeccceeeeccCCCcccceecCCccccCHH
Confidence            9999999 7999999999999999876                    7999999999865432     123455688899


Q ss_pred             ccCCC-CCcHHHHHHH
Q psy9184         483 LFEGE-GDYQFDMYRM  497 (562)
Q Consensus       483 lF~g~-~~~q~dIy~l  497 (562)
                      .+.+. ...+.|+|++
T Consensus       177 ~~~~~~~~~~~Di~sl  192 (267)
T cd08224         177 RIHENGYNFKSDIWSL  192 (267)
T ss_pred             HhccCCCCchhcHHHH
Confidence            87663 4456888875

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a

>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5

Probab=99.90  E-value=5.6e-23  Score=207.57  Aligned_cols=170  Identities=21%  Similarity=0.340  Sum_probs=138.0

Q ss_pred             CCceeeeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCcccccc
Q psy9184         262 ALKNCKKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTELL  335 (562)
Q Consensus       262 ~y~~~~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~l~  335 (562)
                      +|+..+.||+|+||.||+|      +.+|+|.++....      .+.....+.+|+.+++.++|                
T Consensus         1 ~y~~~~~l~~g~~~~vy~~~~~~~g~~~~~k~~~~~~~------~~~~~~~~~~ei~~l~~l~h----------------   58 (284)
T cd07839           1 KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDD------DEGVPSSALREICLLKELKH----------------   58 (284)
T ss_pred             CceeEEEecccCCeEEEEEEECCCCcEEEEEEeecccc------cccCccchhHHHHHHHhcCC----------------
Confidence            4788999999999999999      7899999986431      12222456789999999998                


Q ss_pred             cccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc----cCCHHHHHHHHHHHHHHHHH
Q psy9184         336 KCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK----YRSPNQTYAMILQVVFSLAV  411 (562)
Q Consensus       336 ~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~----~l~e~~i~~I~~QIl~aL~y  411 (562)
                                |||+++++++.+             ...+|++|||+.+ +++..+.    .+++..++.++.||+.||.|
T Consensus        59 ----------~~i~~~~~~~~~-------------~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~  114 (284)
T cd07839          59 ----------KNIVRLYDVLHS-------------DKKLTLVFEYCDQ-DLKKYFDSCNGDIDPEIVKSFMFQLLKGLAF  114 (284)
T ss_pred             ----------CCeeeHHHHhcc-------------CCceEEEEecCCC-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHH
Confidence                      999999999975             4589999999974 5655442    38999999999999999999


Q ss_pred             HHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecCC-----cEEEeecCCCccccCC
Q psy9184         412 AEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVGE-----KICYYDLSQDEELFEG  486 (562)
Q Consensus       412 LH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~~-----g~v~~~l~~~pelF~g  486 (562)
                      ||+ .+|+||||||+||+++.++                    .++|+|||+++.....     ....+..|++||.+.+
T Consensus       115 LH~-~~i~H~dl~~~nil~~~~~--------------------~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~  173 (284)
T cd07839         115 CHS-HNVLHRDLKPQNLLINKNG--------------------ELKLADFGLARAFGIPVRCYSAEVVTLWYRPPDVLFG  173 (284)
T ss_pred             HHH-CCEecCCCCHHHEEEcCCC--------------------cEEECccchhhccCCCCCCcCCCccccCCcChHHHhC
Confidence            999 7999999999999999886                    7999999999865431     2233567899998876


Q ss_pred             C--CCcHHHHHHHh
Q psy9184         487 E--GDYQFDMYRMM  498 (562)
Q Consensus       487 ~--~~~q~dIy~lm  498 (562)
                      .  .+.+.|||++.
T Consensus       174 ~~~~~~~~DiwslG  187 (284)
T cd07839         174 AKLYSTSIDMWSAG  187 (284)
T ss_pred             CcccCcHHHHHHHH
Confidence            4  35678998863

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also

>KOG0194|consensus

Probab=99.90  E-value=5e-23  Score=222.01  Aligned_cols=171  Identities=22%  Similarity=0.247  Sum_probs=139.1

Q ss_pred             CCCceeeeeeccCceEEEEE---------ee-EEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCc
Q psy9184         261 SALKNCKKIGEGVYGEVFKL---------NN-SVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPC  330 (562)
Q Consensus       261 ~~y~~~~~LG~GsfG~Vyka---------~~-vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~  330 (562)
                      ++..+.++||+|+||+||+|         .. ||+|..+.+.     ........++++|+++|+.++|           
T Consensus       157 ~~v~l~kkLGeGaFGeV~~G~l~~~~~~~~~~VAvK~~k~~~-----~~~~~~~~e~m~EArvMr~l~H-----------  220 (474)
T KOG0194|consen  157 SDIELGKKLGEGAFGEVFKGKLKLKNGFKVVPVAVKTTKGSS-----ELTKEQIKEFMKEARVMRQLNH-----------  220 (474)
T ss_pred             cCccccceeecccccEEEEEEEEecCCceeeeeEEEeecccc-----cccHHHHHHHHHHHHHHHhCCC-----------
Confidence            56677799999999999999         13 8999988532     2345667899999999999999           


Q ss_pred             ccccccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCcccccc----CCHHHHHHHHHHHH
Q psy9184         331 FTELLKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIKY----RSPNQTYAMILQVV  406 (562)
Q Consensus       331 fv~l~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~~----l~e~~i~~I~~QIl  406 (562)
                                     ||||++|++...             +..+|||||+|.||++.++++.    ++..+...++.+.+
T Consensus       221 ---------------~NVVr~yGVa~~-------------~~Pl~ivmEl~~gGsL~~~L~k~~~~v~~~ek~~~~~~AA  272 (474)
T KOG0194|consen  221 ---------------PNVVRFYGVAVL-------------EEPLMLVMELCNGGSLDDYLKKNKKSLPTLEKLRFCYDAA  272 (474)
T ss_pred             ---------------CCEEEEEEEEcC-------------CCccEEEEEecCCCcHHHHHHhCCCCCCHHHHHHHHHHHH
Confidence                           899999987765             4589999999999999888864    78899999999999


Q ss_pred             HHHHHHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecC-----CcEEEeecCCCc
Q psy9184         407 FSLAVAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVG-----EKICYYDLSQDE  481 (562)
Q Consensus       407 ~aL~yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~-----~g~v~~~l~~~p  481 (562)
                      .||+|||+ .++|||||-..|+|+..++                    .+||+|||||+....     ..+-.---|.+|
T Consensus       273 ~Gl~YLh~-k~~IHRDIAARNcL~~~~~--------------------~vKISDFGLs~~~~~~~~~~~~~klPirWLAP  331 (474)
T KOG0194|consen  273 RGLEYLHS-KNCIHRDIAARNCLYSKKG--------------------VVKISDFGLSRAGSQYVMKKFLKKLPIRWLAP  331 (474)
T ss_pred             hHHHHHHH-CCCcchhHhHHHheecCCC--------------------eEEeCccccccCCcceeeccccccCcceecCh
Confidence            99999999 6999999999999999986                    689999999987642     122122345678


Q ss_pred             cccCC-CCCcHHHHHH
Q psy9184         482 ELFEG-EGDYQFDMYR  496 (562)
Q Consensus       482 elF~g-~~~~q~dIy~  496 (562)
                      |.+.. ..+...|||+
T Consensus       332 Etl~~~~~s~kTDV~s  347 (474)
T KOG0194|consen  332 ETLNTGIFSFKTDVWS  347 (474)
T ss_pred             hhhccCccccccchhh
Confidence            77665 4555678874

>KOG0669|consensus

Probab=99.90  E-value=1.6e-25  Score=219.14  Aligned_cols=194  Identities=18%  Similarity=0.299  Sum_probs=153.6

Q ss_pred             CCCCCceeeeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCccc
Q psy9184         259 PSSALKNCKKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFT  332 (562)
Q Consensus       259 ~~~~y~~~~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv  332 (562)
                      ..+.|+...+||+|.||+||+|      +.||+|++-.+..      ....-...++|+.+|+.|+|             
T Consensus        15 ~~~~yek~~kigqGtfgeVFkAr~~n~~kkvalkkvlmene------KeGfpitalreikiL~~lkH-------------   75 (376)
T KOG0669|consen   15 EVSKYEKLAKIGQGTFGEVFKARSKNTGKKVALKKVLMENE------KEGFPITALREIKILQLLKH-------------   75 (376)
T ss_pred             cchHHHHHHhcCCchHHHHHHHhhcCccchhHHHHHHHhcc------ccCCcHHHHHHHHHHHHhcc-------------
Confidence            3467888999999999999999      7789988765431      12223456899999999999             


Q ss_pred             ccccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCcc----ccccCCHHHHHHHHHHHHHH
Q psy9184         333 ELLKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSG----DIKYRSPNQTYAMILQVVFS  408 (562)
Q Consensus       333 ~l~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~----~l~~l~e~~i~~I~~QIl~a  408 (562)
                                   +|++.+.+.+....+     |.......+|+||.+|+. ++.-    ...+++..++..++.+++.|
T Consensus        76 -------------env~nliEic~tk~T-----p~~r~r~t~ylVf~~ceh-DLaGlLsn~~vr~sls~Ikk~Mk~Lm~G  136 (376)
T KOG0669|consen   76 -------------ENVVNLIEICRTKAT-----PTNRDRATFYLVFDFCEH-DLAGLLSNRKVRFSLSEIKKVMKGLMNG  136 (376)
T ss_pred             -------------hhHHHHHHHHhhccC-----CcccccceeeeeHHHhhh-hHHHHhcCccccccHHHHHHHHHHHHHH
Confidence                         899999988876543     233345579999999973 2322    22468999999999999999


Q ss_pred             HHHHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecC-------------------
Q psy9184         409 LAVAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVG-------------------  469 (562)
Q Consensus       409 L~yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~-------------------  469 (562)
                      |.|+|+ ..|+|||+||+|+||+.++                    .+||+|||++|.+..                   
T Consensus       137 L~~iHr-~kilHRDmKaaNvLIt~dg--------------------ilklADFGlar~fs~~~n~~kprytnrvvTLwYr  195 (376)
T KOG0669|consen  137 LYYIHR-NKILHRDMKAANVLITKDG--------------------ILKLADFGLARAFSTSKNVVKPRYTNRVVTLWYR  195 (376)
T ss_pred             HHHHHH-hhHHhhcccHhhEEEcCCc--------------------eEEeeccccccceecccccCCCCcccceeeeecC
Confidence            999999 7999999999999999997                    899999999976543                   


Q ss_pred             -------------------CcEEEeecCCCccccCCCCCcH--HHHHHHhhcccCCCCCCCCC
Q psy9184         470 -------------------EKICYYDLSQDEELFEGEGDYQ--FDMYRMMRKQCQNNWQNFTP  511 (562)
Q Consensus       470 -------------------~g~v~~~l~~~pelF~g~~~~q--~dIy~lm~~~~~~~W~~~~P  511 (562)
                                         .||+..++|++.++|+|..+.+  .-|-.++|....+.|+....
T Consensus       196 ppEllLG~r~yg~~iDiWgAgCimaeMwtrspimqgnteqqql~~Is~LcGs~tkevWP~~d~  258 (376)
T KOG0669|consen  196 PPELLLGDREYGPPIDIWGAGCIMAEMWTRSPIMQGNTEQQQLHLISQLCGSITKEVWPNVDN  258 (376)
T ss_pred             CHHHhhcccccCCcchhHhHHHHHHHHHccCccccCChHHHHHHHHHHHhccCCcccCCCccc
Confidence                               4677888888888888876655  56667788888888877643

>PHA03209 serine/threonine kinase US3; Provisional

Probab=99.90  E-value=2.7e-23  Score=219.17  Aligned_cols=163  Identities=17%  Similarity=0.161  Sum_probs=135.7

Q ss_pred             CCCceeeeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCccccc
Q psy9184         261 SALKNCKKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTEL  334 (562)
Q Consensus       261 ~~y~~~~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~l  334 (562)
                      .+|++.+.||+|+||.||+|      ..||+|+....              ....|+.+++.++|               
T Consensus        66 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~valK~~~~~--------------~~~~E~~~l~~l~h---------------  116 (357)
T PHA03209         66 LGYTVIKTLTPGSEGRVFVATKPGQPDPVVLKIGQKG--------------TTLIEAMLLQNVNH---------------  116 (357)
T ss_pred             cCcEEEEEecCCCCeEEEEEEECCCCceEEEEeCCcc--------------ccHHHHHHHHhCCC---------------
Confidence            57999999999999999999      68999975432              23569999999998               


Q ss_pred             ccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc----cCCHHHHHHHHHHHHHHHH
Q psy9184         335 LKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK----YRSPNQTYAMILQVVFSLA  410 (562)
Q Consensus       335 ~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~----~l~e~~i~~I~~QIl~aL~  410 (562)
                                 |||+++++++..             .+..|+|||++. |+++..+.    .+++.++..|+.||+.||.
T Consensus       117 -----------~~iv~~~~~~~~-------------~~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~i~~qi~~aL~  171 (357)
T PHA03209        117 -----------PSVIRMKDTLVS-------------GAITCMVLPHYS-SDLYTYLTKRSRPLPIDQALIIEKQILEGLR  171 (357)
T ss_pred             -----------CCCcChhheEEe-------------CCeeEEEEEccC-CcHHHHHHhccCCCCHHHHHHHHHHHHHHHH
Confidence                       999999998875             457899999996 55665553    3889999999999999999


Q ss_pred             HHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecC----CcEEEeecCCCccccCC
Q psy9184         411 VAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVG----EKICYYDLSQDEELFEG  486 (562)
Q Consensus       411 yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~----~g~v~~~l~~~pelF~g  486 (562)
                      |||+ .||+||||||+|||++..+                    .++|+|||+++....    .+..++..|++||++.+
T Consensus       172 ~LH~-~~ivHrDlkp~Nill~~~~--------------------~~kl~DfG~a~~~~~~~~~~~~~gt~~y~aPE~~~~  230 (357)
T PHA03209        172 YLHA-QRIIHRDVKTENIFINDVD--------------------QVCIGDLGAAQFPVVAPAFLGLAGTVETNAPEVLAR  230 (357)
T ss_pred             HHHH-CCeecCCCCHHHEEECCCC--------------------CEEEecCccccccccCcccccccccccccCCeecCC
Confidence            9999 7999999999999998876                    699999999985432    34456778999998876


Q ss_pred             -CCCcHHHHHHHh
Q psy9184         487 -EGDYQFDMYRMM  498 (562)
Q Consensus       487 -~~~~q~dIy~lm  498 (562)
                       ..+.+.|||++.
T Consensus       231 ~~~~~~~DiwSlG  243 (357)
T PHA03209        231 DKYNSKADIWSAG  243 (357)
T ss_pred             CCCCchhhHHHHH
Confidence             456668998864

>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7

Probab=99.90  E-value=2.5e-23  Score=207.91  Aligned_cols=173  Identities=20%  Similarity=0.326  Sum_probs=141.0

Q ss_pred             CCCceeeeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCccccc
Q psy9184         261 SALKNCKKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTEL  334 (562)
Q Consensus       261 ~~y~~~~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~l  334 (562)
                      ++|++.+.||+|+||.||+|      ..+|||.+....     ........++.+|+.+++.+.|               
T Consensus         2 ~~y~~~~~ig~g~~g~v~~~~~~~~~~~~~vK~~~~~~-----~~~~~~~~~~~~e~~~l~~~~h---------------   61 (267)
T cd08229           2 ANFRIEKKIGRGQFSEVYRATCLLDGVPVALKKVQIFD-----LMDAKARADCIKEIDLLKQLNH---------------   61 (267)
T ss_pred             chhhhhhhhcccCCeEEEEEeecCCCceEEEEeeeehh-----hhhHHHHHHHHHHHHHHHHccC---------------
Confidence            46888999999999999999      799999887643     2233445678899999999988               


Q ss_pred             ccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc-------cCCHHHHHHHHHHHHH
Q psy9184         335 LKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK-------YRSPNQTYAMILQVVF  407 (562)
Q Consensus       335 ~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~-------~l~e~~i~~I~~QIl~  407 (562)
                                 |||+++++.|..             ++..+++|||++||++.+.+.       .+++..++.++.||+.
T Consensus        62 -----------~~i~~~~~~~~~-------------~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~  117 (267)
T cd08229          62 -----------PNVIKYYASFIE-------------DNELNIVLELADAGDLSRMIKHFKKQKRLIPEKTVWKYFVQLCS  117 (267)
T ss_pred             -----------CchhhhhheeEe-------------CCeEEEEEEecCCCCHHHHHHHhhccCCCCCHHHHHHHHHHHHH
Confidence                       999999988875             558999999999998765442       3789999999999999


Q ss_pred             HHHHHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecCC-----cEEEeecCCCcc
Q psy9184         408 SLAVAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVGE-----KICYYDLSQDEE  482 (562)
Q Consensus       408 aL~yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~~-----g~v~~~l~~~pe  482 (562)
                      ||.|||+ .|++|+||||+||+++.++                    .++|+|||+++.....     +......|++||
T Consensus       118 ~l~~LH~-~~i~H~dl~p~nili~~~~--------------------~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~ape  176 (267)
T cd08229         118 ALEHMHS-RRVMHRDIKPANVFITATG--------------------VVKLGDLGLGRFFSSKTTAAHSLVGTPYYMSPE  176 (267)
T ss_pred             HHHHHHH-CCeecCCCCHHHEEEcCCC--------------------CEEECcchhhhccccCCcccccccCCcCccCHH
Confidence            9999999 7999999999999998876                    7999999998876432     223455688899


Q ss_pred             ccCCC-CCcHHHHHHHh
Q psy9184         483 LFEGE-GDYQFDMYRMM  498 (562)
Q Consensus       483 lF~g~-~~~q~dIy~lm  498 (562)
                      .+.+. .+...|+|+..
T Consensus       177 ~~~~~~~~~~~Dv~slG  193 (267)
T cd08229         177 RIHENGYNFKSDIWSLG  193 (267)
T ss_pred             HhcCCCccchhhHHHHH
Confidence            87653 45568888753

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.

>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=99.90  E-value=3.1e-23  Score=209.81  Aligned_cols=171  Identities=19%  Similarity=0.184  Sum_probs=134.7

Q ss_pred             CceeeeeeccCceEEEEE----------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCccc
Q psy9184         263 LKNCKKIGEGVYGEVFKL----------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFT  332 (562)
Q Consensus       263 y~~~~~LG~GsfG~Vyka----------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv  332 (562)
                      |+..+.||+|+||.||++          ..||+|++....       .......+.+|+.+++.++|             
T Consensus         6 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~-------~~~~~~~~~~E~~~l~~l~h-------------   65 (283)
T cd05080           6 LKKIRVLGEGHFGKVSLYCYDPANDGTGEMVAVKTLKREC-------GQQNTSGWKKEINILKTLYH-------------   65 (283)
T ss_pred             ceeceecccCCCcEEEEeeEccccCCCCceEEEEEecccc-------ChHHHHHHHHHHHHHHhCCC-------------
Confidence            488999999999999874          579999987542       12234567889999999998             


Q ss_pred             ccccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc--cCCHHHHHHHHHHHHHHHH
Q psy9184         333 ELLKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK--YRSPNQTYAMILQVVFSLA  410 (562)
Q Consensus       333 ~l~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~--~l~e~~i~~I~~QIl~aL~  410 (562)
                                   |||+++++++...           ....+|++|||+.+|++.+.+.  .+++.+++.++.|++.||.
T Consensus        66 -------------~~i~~~~~~~~~~-----------~~~~~~lv~e~~~~~~l~~~~~~~~l~~~~~~~i~~~l~~~l~  121 (283)
T cd05080          66 -------------ENIVKYKGCCSEQ-----------GGKGLQLIMEYVPLGSLRDYLPKHKLNLAQLLLFAQQICEGMA  121 (283)
T ss_pred             -------------CCEeeEEEEEecC-----------CCceEEEEecCCCCCCHHHHHHHcCCCHHHHHHHHHHHHHHHH
Confidence                         9999998876542           1346899999999998766654  4899999999999999999


Q ss_pred             HHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecCCcE--------EEeecCCCcc
Q psy9184         411 VAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVGEKI--------CYYDLSQDEE  482 (562)
Q Consensus       411 yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~~g~--------v~~~l~~~pe  482 (562)
                      |||+ .+|+||||||+|||++.++                    .++|+|||+++.......        .....|++||
T Consensus       122 ~lH~-~~i~H~dlkp~Nili~~~~--------------------~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~PE  180 (283)
T cd05080         122 YLHS-QHYIHRDLAARNVLLDNDR--------------------LVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAVE  180 (283)
T ss_pred             HHHH-CCeeccccChheEEEcCCC--------------------cEEEeecccccccCCcchhhccCCCCCCCceeeCHh
Confidence            9999 7999999999999998876                    799999999987643111        1123367888


Q ss_pred             ccCC-CCCcHHHHHHHh
Q psy9184         483 LFEG-EGDYQFDMYRMM  498 (562)
Q Consensus       483 lF~g-~~~~q~dIy~lm  498 (562)
                      .+.+ ..+...|||++.
T Consensus       181 ~~~~~~~~~~~Di~slG  197 (283)
T cd05080         181 CLKENKFSYASDVWSFG  197 (283)
T ss_pred             HhcccCCCcccccHHHH
Confidence            7654 445568888753

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign

>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src

Probab=99.90  E-value=3.4e-23  Score=207.70  Aligned_cols=170  Identities=24%  Similarity=0.302  Sum_probs=137.7

Q ss_pred             CCCCCceeeeeeccCceEEEEE-----eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCcccc
Q psy9184         259 PSSALKNCKKIGEGVYGEVFKL-----NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTE  333 (562)
Q Consensus       259 ~~~~y~~~~~LG~GsfG~Vyka-----~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~  333 (562)
                      +.++|.+.++||+|+||.||+|     ..||+|++.....         ..+.+.+|+.+++.++|              
T Consensus         4 ~~~~~~~~~~lg~g~~~~v~~~~~~~~~~valK~~~~~~~---------~~~~~~~E~~~l~~l~~--------------   60 (262)
T cd05071           4 PRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTM---------SPEAFLQEAQVMKKLRH--------------   60 (262)
T ss_pred             ChHHeeEeeecCCCCCCcEEEEEecCCceEEEEecccCcc---------CHHHHHHHHHHHHhCCC--------------
Confidence            4567999999999999999999     5799999875421         12467889999999998              


Q ss_pred             cccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc-----cCCHHHHHHHHHHHHHH
Q psy9184         334 LLKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK-----YRSPNQTYAMILQVVFS  408 (562)
Q Consensus       334 l~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~-----~l~e~~i~~I~~QIl~a  408 (562)
                                  |||+++++.+.              ++..|+||||+.+|++.+.+.     .+++..+..++.|++.|
T Consensus        61 ------------~~i~~~~~~~~--------------~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~a  114 (262)
T cd05071          61 ------------EKLVQLYAVVS--------------EEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASG  114 (262)
T ss_pred             ------------CCcceEEEEEC--------------CCCcEEEEEcCCCCcHHHHHhhccccCCCHHHHHHHHHHHHHH
Confidence                        99999987664              346799999999998876664     27889999999999999


Q ss_pred             HHHHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecCCc------EEEeecCCCcc
Q psy9184         409 LAVAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVGEK------ICYYDLSQDEE  482 (562)
Q Consensus       409 L~yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~~g------~v~~~l~~~pe  482 (562)
                      |+|||+ .+|+||||||+||+++.++                    .++|+|||+++......      ......|++||
T Consensus       115 L~~lH~-~~i~H~dl~p~Nill~~~~--------------------~~~L~dfg~~~~~~~~~~~~~~~~~~~~~y~~PE  173 (262)
T cd05071         115 MAYVER-MNYVHRDLRAANILVGENL--------------------VCKVADFGLARLIEDNEYTARQGAKFPIKWTAPE  173 (262)
T ss_pred             HHHHHH-CCccccccCcccEEEcCCC--------------------cEEeccCCceeeccccccccccCCcccceecCHh
Confidence            999999 7999999999999999876                    79999999998765322      22233578888


Q ss_pred             ccCC-CCCcHHHHHHHh
Q psy9184         483 LFEG-EGDYQFDMYRMM  498 (562)
Q Consensus       483 lF~g-~~~~q~dIy~lm  498 (562)
                      ...+ ..+...|+|++.
T Consensus       174 ~~~~~~~~~~~DvwslG  190 (262)
T cd05071         174 AALYGRFTIKSDVWSFG  190 (262)
T ss_pred             HhccCCCCchhhHHHHH
Confidence            7654 456678998864

Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo

>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase

Probab=99.90  E-value=9.2e-23  Score=209.99  Aligned_cols=171  Identities=22%  Similarity=0.267  Sum_probs=140.8

Q ss_pred             CCceeeeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCcccccc
Q psy9184         262 ALKNCKKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTELL  335 (562)
Q Consensus       262 ~y~~~~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~l~  335 (562)
                      +|++.+.||+|+||.||++      ..+|+|.+....       ......++.+|+.+++.++|                
T Consensus         2 ~~~~~~~lg~G~~g~v~~~~~~~~~~~~a~k~~~~~~-------~~~~~~~~~~E~~~l~~l~h----------------   58 (308)
T cd06615           2 DFEKLGELGAGNGGVVTKVLHRPSGLIMARKLIHLEI-------KPAIRNQIIRELKVLHECNS----------------   58 (308)
T ss_pred             CceEEeeccCCCCeEEEEEEEcCCCeEEEEEEecccc-------CHHHHHHHHHHHHHHHhCCC----------------
Confidence            5889999999999999999      678999887542       23344678899999999998                


Q ss_pred             cccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc---cCCHHHHHHHHHHHHHHHHHH
Q psy9184         336 KCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK---YRSPNQTYAMILQVVFSLAVA  412 (562)
Q Consensus       336 ~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~---~l~e~~i~~I~~QIl~aL~yL  412 (562)
                                |||+++++.|..             ++.+|+||||++||++.+.+.   .+++..+..++.||+.||.||
T Consensus        59 ----------~~iv~~~~~~~~-------------~~~~~lv~ey~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~l  115 (308)
T cd06615          59 ----------PYIVGFYGAFYS-------------DGEISICMEHMDGGSLDQVLKKAGRIPENILGKISIAVLRGLTYL  115 (308)
T ss_pred             ----------CCCCeEEEEEee-------------CCEEEEEeeccCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHH
Confidence                      999999998875             568999999999987766653   478999999999999999999


Q ss_pred             HhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecC---CcEEEeecCCCccccCCC-C
Q psy9184         413 EVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVG---EKICYYDLSQDEELFEGE-G  488 (562)
Q Consensus       413 H~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~---~g~v~~~l~~~pelF~g~-~  488 (562)
                      |+.++|+||||||+|||++.++                    .++|+|||+++....   ...+.+..|.+||.+.+. .
T Consensus       116 H~~~~i~H~dl~p~nil~~~~~--------------------~~~l~dfg~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~  175 (308)
T cd06615         116 REKHKIMHRDVKPSNILVNSRG--------------------EIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTHY  175 (308)
T ss_pred             HhhCCEEECCCChHHEEEecCC--------------------cEEEccCCCcccccccccccCCCCcCccChhHhcCCCC
Confidence            9856899999999999998876                    699999999886543   223345678899988763 4


Q ss_pred             CcHHHHHHHh
Q psy9184         489 DYQFDMYRMM  498 (562)
Q Consensus       489 ~~q~dIy~lm  498 (562)
                      ....|+|++.
T Consensus       176 ~~~~DiwslG  185 (308)
T cd06615         176 TVQSDIWSLG  185 (308)
T ss_pred             CccchHHHHH
Confidence            4558998753

Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down

>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase

Probab=99.90  E-value=1e-22  Score=206.85  Aligned_cols=184  Identities=16%  Similarity=0.196  Sum_probs=143.0

Q ss_pred             CCCCceeeeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCcccc
Q psy9184         260 SSALKNCKKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTE  333 (562)
Q Consensus       260 ~~~y~~~~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~  333 (562)
                      ..+|.+.+.||+|+||.||+|      ..||+|++.....       ......+.+|+.+++.++|              
T Consensus         4 ~~~y~~~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~-------~~~~~~~~~e~~~l~~l~h--------------   62 (291)
T cd07870           4 ATSYLNLEKLGEGSYATVYKGISRINGQLVALKVISMKTE-------EGVPFTAIREASLLKGLKH--------------   62 (291)
T ss_pred             cceeEEEEEEEecCCEEEEEEEEcCCCcEEEEEEecccCc-------CCCcHHHHHHHHHHHhcCC--------------
Confidence            467999999999999999999      7899999976531       1112355789999999998              


Q ss_pred             cccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc----cCCHHHHHHHHHHHHHHH
Q psy9184         334 LLKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK----YRSPNQTYAMILQVVFSL  409 (562)
Q Consensus       334 l~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~----~l~e~~i~~I~~QIl~aL  409 (562)
                                  +||+++++++..             ++..|+||||+. +.++..+.    .+++.++..++.||+.||
T Consensus        63 ------------~ni~~~~~~~~~-------------~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~~L  116 (291)
T cd07870          63 ------------ANIVLLHDIIHT-------------KETLTFVFEYMH-TDLAQYMIQHPGGLHPYNVRLFMFQLLRGL  116 (291)
T ss_pred             ------------CCEeEEEEEEec-------------CCeEEEEEeccc-CCHHHHHHhCCCCCCHHHHHHHHHHHHHHH
Confidence                        999999998864             558999999996 55655442    367889999999999999


Q ss_pred             HHHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecC-----CcEEEeecCCCcccc
Q psy9184         410 AVAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVG-----EKICYYDLSQDEELF  484 (562)
Q Consensus       410 ~yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~-----~g~v~~~l~~~pelF  484 (562)
                      .|||+ .+|+||||||+|||++.++                    .++|+|||+++....     .....+..|++||.+
T Consensus       117 ~~lH~-~~i~H~dlkp~Nil~~~~~--------------------~~~l~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~  175 (291)
T cd07870         117 AYIHG-QHILHRDLKPQNLLISYLG--------------------ELKLADFGLARAKSIPSQTYSSEVVTLWYRPPDVL  175 (291)
T ss_pred             HHHHh-CCcccCCCChHHEEEcCCC--------------------cEEEeccccccccCCCCCCCCCccccccccCCcee
Confidence            99999 7999999999999998876                    799999999986432     223446678999988


Q ss_pred             CCC--CCcHHHHHHHhhcccCCCCCCCCCC
Q psy9184         485 EGE--GDYQFDMYRMMRKQCQNNWQNFTPK  512 (562)
Q Consensus       485 ~g~--~~~q~dIy~lm~~~~~~~W~~~~P~  512 (562)
                      .+.  .....|+|++. ..+...+.+..|+
T Consensus       176 ~~~~~~~~~~Dv~slG-~~l~~l~~g~~~f  204 (291)
T cd07870         176 LGATDYSSALDIWGAG-CIFIEMLQGQPAF  204 (291)
T ss_pred             ecCCCCCcHHHHHHHH-HHHHHHHhCCCCC
Confidence            763  35568999863 3333344444444

Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess

>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors

Probab=99.90  E-value=2.6e-23  Score=211.18  Aligned_cols=172  Identities=20%  Similarity=0.286  Sum_probs=137.1

Q ss_pred             CCCCCceeeeeeccCceEEEEE-----------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhc-CCccccCCC
Q psy9184         259 PSSALKNCKKIGEGVYGEVFKL-----------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKET-SDLQYRTEN  326 (562)
Q Consensus       259 ~~~~y~~~~~LG~GsfG~Vyka-----------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L-~h~~~~~~n  326 (562)
                      ..++|++.+.||+|+||.||++           ..+|+|.+....       .......+.+|+.+++.+ +|       
T Consensus        10 ~~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~~a~k~~~~~~-------~~~~~~~~~~E~~~l~~l~~h-------   75 (293)
T cd05053          10 PRDRLTLGKPLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDA-------TEKDLSDLVSEMEMMKMIGKH-------   75 (293)
T ss_pred             CHhHeEEeeEecccccccEEEEEEecCCCCCCceeEEEEEccCCC-------CHHHHHHHHHHHHHHHhhcCC-------
Confidence            3467899999999999999998           368999887542       123345688999999999 56       


Q ss_pred             CCCcccccccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc---------------
Q psy9184         327 STPCFTELLKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK---------------  391 (562)
Q Consensus       327 ~~p~fv~l~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~---------------  391 (562)
                                         |||+++++++..             ++.+|++|||+.+|++...+.               
T Consensus        76 -------------------~~i~~~~~~~~~-------------~~~~~li~e~~~~~~L~~~l~~~~~~~~~~~~~~~~  123 (293)
T cd05053          76 -------------------KNIINLLGVCTQ-------------EGPLYVVVEYAAHGNLRDFLRARRPPGEYASPDDPR  123 (293)
T ss_pred             -------------------CCeeeEEEEEcC-------------CCCeEEEEEeCCCCcHHHHHHhcCCCcccccccccc
Confidence                               999999998865             457999999999998765542               


Q ss_pred             ----cCCHHHHHHHHHHHHHHHHHHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeee
Q psy9184         392 ----YRSPNQTYAMILQVVFSLAVAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCF  467 (562)
Q Consensus       392 ----~l~e~~i~~I~~QIl~aL~yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~  467 (562)
                          .+++..+..++.||+.||.|||+ .+|+||||||+|||++.++                    .++|+|||+++..
T Consensus       124 ~~~~~l~~~~~~~i~~qi~~al~~LH~-~~ivH~dlkp~Nil~~~~~--------------------~~kL~Dfg~~~~~  182 (293)
T cd05053         124 PPEETLTQKDLVSFAYQVARGMEFLAS-KKCIHRDLAARNVLVTEDH--------------------VMKIADFGLARDI  182 (293)
T ss_pred             ccccccCHHHHHHHHHHHHHHHHHHHH-CCccccccceeeEEEcCCC--------------------eEEeCcccccccc
Confidence                37888999999999999999999 7999999999999998876                    7999999999875


Q ss_pred             cCCc-------EEEeecCCCccccCC-CCCcHHHHHHH
Q psy9184         468 VGEK-------ICYYDLSQDEELFEG-EGDYQFDMYRM  497 (562)
Q Consensus       468 ~~~g-------~v~~~l~~~pelF~g-~~~~q~dIy~l  497 (562)
                      ....       ......|++||.+.+ ..+.+.|||+.
T Consensus       183 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~sl  220 (293)
T cd05053         183 HHIDYYRKTTNGRLPVKWMAPEALFDRVYTHQSDVWSF  220 (293)
T ss_pred             ccccceeccCCCCCCccccCHHHhccCCcCcccceeeh
Confidence            4311       011234788997655 35556788774

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,

>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1

Probab=99.90  E-value=3.9e-23  Score=211.56  Aligned_cols=230  Identities=19%  Similarity=0.231  Sum_probs=165.1

Q ss_pred             CCCCCceeeeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCccc
Q psy9184         259 PSSALKNCKKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFT  332 (562)
Q Consensus       259 ~~~~y~~~~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv  332 (562)
                      +..+|++.+.||+|+||.||+|      ..+|+|.+....        ....+.+.+|+.+++.+.|             
T Consensus        18 ~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~ik~~~~~~--------~~~~~~~~~e~~~l~~~~h-------------   76 (296)
T cd06654          18 PKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQ--------QPKKELIINEILVMRENKN-------------   76 (296)
T ss_pred             cccceeeEEEecCCCCeEEEEEEECCCCcEEEEEEEecCC--------cchHHHHHHHHHHHHhCCC-------------
Confidence            4478999999999999999999      789999988653        1223567899999999998             


Q ss_pred             ccccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc--cCCHHHHHHHHHHHHHHHH
Q psy9184         333 ELLKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK--YRSPNQTYAMILQVVFSLA  410 (562)
Q Consensus       333 ~l~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~--~l~e~~i~~I~~QIl~aL~  410 (562)
                                   ||++++++.|..             +...|+||||+.||++.+.+.  .+++.++..++.|++.||+
T Consensus        77 -------------~~v~~~~~~~~~-------------~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~i~~ql~~aL~  130 (296)
T cd06654          77 -------------PNIVNYLDSYLV-------------GDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQALE  130 (296)
T ss_pred             -------------CCEeeEEEEEEe-------------CCEEEEeecccCCCCHHHHHHhcCCCHHHHHHHHHHHHHHHH
Confidence                         999999988865             458999999999998776654  3789999999999999999


Q ss_pred             HHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecCC-----cEEEeecCCCccccC
Q psy9184         411 VAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVGE-----KICYYDLSQDEELFE  485 (562)
Q Consensus       411 yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~~-----g~v~~~l~~~pelF~  485 (562)
                      |||+ .||+||||||+|||++.++                    .++|+|||+++.....     ....+..|++||.+.
T Consensus       131 ~LH~-~gi~H~dLkp~Nill~~~~--------------------~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~  189 (296)
T cd06654         131 FLHS-NQVIHRDIKSDNILLGMDG--------------------SVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVT  189 (296)
T ss_pred             HHHH-CCcccCCCCHHHEEEcCCC--------------------CEEECccccchhccccccccCcccCCccccCHHHHc
Confidence            9999 7999999999999998876                    7999999998865431     234456788999887


Q ss_pred             CC-CCcHHHHHHHhhcccCCCCCCCCCCChhhhHHHHHHHHhhcccCCCCCCCchhHHHHHHHHHHHhcCCCcCcCC
Q psy9184         486 GE-GDYQFDMYRMMRKQCQNNWQNFTPKNNVFWIHYLVDKATCLKKGYQYLRAPRHQAFELLEELGQNALHFDSCYE  561 (562)
Q Consensus       486 g~-~~~q~dIy~lm~~~~~~~W~~~~P~tn~~wl~yl~~~Ll~~~~~~~~~~~~~~~~~~~l~~l~~~~l~~~s~~~  561 (562)
                      +. ...+.|+|+..-.. .....+..|+.......-+...... ......   ........+.+|..++|.++...|
T Consensus       190 ~~~~~~~~Dv~s~Gvil-~~l~~g~~pf~~~~~~~~~~~~~~~-~~~~~~---~~~~~~~~l~~li~~~l~~~p~~R  261 (296)
T cd06654         190 RKAYGPKVDIWSLGIMA-IEMIEGEPPYLNENPLRALYLIATN-GTPELQ---NPEKLSAIFRDFLNRCLDMDVEKR  261 (296)
T ss_pred             CCCCCccchHHHHHHHH-HHHHhCCCCCCCCCHHHhHHHHhcC-CCCCCC---CccccCHHHHHHHHHHCcCCcccC
Confidence            64 45668998864333 2333444454222111111111111 111100   011223567777888888776654

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase

Probab=99.90  E-value=5.5e-23  Score=205.10  Aligned_cols=220  Identities=15%  Similarity=0.174  Sum_probs=155.7

Q ss_pred             eeeccCceEEEEE--------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCcccccccccc
Q psy9184         268 KIGEGVYGEVFKL--------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTELLKCSC  339 (562)
Q Consensus       268 ~LG~GsfG~Vyka--------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~l~~~~i  339 (562)
                      +||+|+||.||+|        ..+|+|++....      ......+.+.+|+.+++.++|                    
T Consensus         2 ~lg~G~~g~v~~~~~~~~~~~~~~aiK~~~~~~------~~~~~~~~~~~e~~~l~~l~h--------------------   55 (257)
T cd05116           2 ELGSGNFGTVKKGMYKMKKSEKTVAVKILKNDN------NDPALKDELLREANVMQQLDN--------------------   55 (257)
T ss_pred             cCCCcCCcceEEeEEecCCCceEEEEEEccCCC------CcHHHHHHHHHHHHHHHhCCC--------------------
Confidence            6899999999987        789999987542      123455778999999999998                    


Q ss_pred             cCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc---cCCHHHHHHHHHHHHHHHHHHHhhC
Q psy9184         340 VRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK---YRSPNQTYAMILQVVFSLAVAEVEL  416 (562)
Q Consensus       340 v~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~---~l~e~~i~~I~~QIl~aL~yLH~~~  416 (562)
                            |||+++++.+.              .+..++||||+.+|++.+.+.   .+++..+..++.|++.||.|||+ .
T Consensus        56 ------~~i~~~~~~~~--------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~al~~lH~-~  114 (257)
T cd05116          56 ------PYIVRMIGICE--------------AESWMLVMELAELGPLNKFLQKNKHVTEKNITELVHQVSMGMKYLEE-T  114 (257)
T ss_pred             ------CCcceEEEEEc--------------CCCcEEEEecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHH-C
Confidence                  99999987764              235789999999997766553   48899999999999999999999 7


Q ss_pred             CeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecCCcE--------EEeecCCCccccCC-C
Q psy9184         417 EFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVGEKI--------CYYDLSQDEELFEG-E  487 (562)
Q Consensus       417 ~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~~g~--------v~~~l~~~pelF~g-~  487 (562)
                      ||+||||||.|||++.++                    .++|+|||+++.......        ..+..|++||.+.+ .
T Consensus       115 ~i~H~dlkp~nill~~~~--------------------~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~  174 (257)
T cd05116         115 NFVHRDLAARNVLLVTQH--------------------YAKISDFGLSKALGADENYYKAKTHGKWPVKWYAPECMNYYK  174 (257)
T ss_pred             CEeecccchhhEEEcCCC--------------------eEEECCCccccccCCCCCeeeecCCCCCCccccCHhHhccCC
Confidence            999999999999999875                    799999999987643211        11246788997765 3


Q ss_pred             CCcHHHHHHHhhcccCCCCC-CCCCCChhhhHHHHHHHHhhcccCCCCCCCchhHHHHHHHHHHHhcCCCcCcCC
Q psy9184         488 GDYQFDMYRMMRKQCQNNWQ-NFTPKNNVFWIHYLVDKATCLKKGYQYLRAPRHQAFELLEELGQNALHFDSCYE  561 (562)
Q Consensus       488 ~~~q~dIy~lm~~~~~~~W~-~~~P~tn~~wl~yl~~~Ll~~~~~~~~~~~~~~~~~~~l~~l~~~~l~~~s~~~  561 (562)
                      .+...|+|++. ......+. +..|+.... ..-+.+.+.. +.....+.    ..-..+.+++..+++++...|
T Consensus       175 ~~~~~Di~slG-~~l~el~t~g~~p~~~~~-~~~~~~~i~~-~~~~~~~~----~~~~~l~~li~~~~~~~p~~R  242 (257)
T cd05116         175 FSSKSDVWSFG-VLMWEAFSYGQKPYKGMK-GNEVTQMIES-GERMECPQ----RCPPEMYDLMKLCWTYGVDER  242 (257)
T ss_pred             cCchhHHHHHH-HHHHHHHhCCCCCCCCCC-HHHHHHHHHC-CCCCCCCC----CCCHHHHHHHHHHhccCchhC
Confidence            45568998863 33323332 444543221 1112222222 22211111    123467778888888877665

Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio

>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase

Probab=99.90  E-value=8e-23  Score=209.75  Aligned_cols=172  Identities=17%  Similarity=0.282  Sum_probs=138.6

Q ss_pred             CCceeeeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCcccccc
Q psy9184         262 ALKNCKKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTELL  335 (562)
Q Consensus       262 ~y~~~~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~l~  335 (562)
                      +|++.+.||+|+||.||++      +.||+|.+....     .........+.+|+.+++.++|                
T Consensus         2 ~y~~~~~l~~g~~~~v~~~~~~~~~~~v~ik~~~~~~-----~~~~~~~~~~~~e~~~l~~~~~----------------   60 (305)
T cd05609           2 DFETIKLISNGAYGAVYLVRHKETRQRFAMKKINKQN-----LILRNQIQQVFVERDILTFAEN----------------   60 (305)
T ss_pred             CceEeeEeecCCCeeEEEEEECCCCcEEEEEEeehhh-----hhhHHHHHHHHHHHHHHHhCCC----------------
Confidence            5889999999999999999      789999987642     2223445678899999999988                


Q ss_pred             cccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc---cCCHHHHHHHHHHHHHHHHHH
Q psy9184         336 KCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK---YRSPNQTYAMILQVVFSLAVA  412 (562)
Q Consensus       336 ~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~---~l~e~~i~~I~~QIl~aL~yL  412 (562)
                                |||+++++.+..             ++.+|+||||+.||++.+.+.   .+++..+..++.|++.||.||
T Consensus        61 ----------~~i~~~~~~~~~-------------~~~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~l  117 (305)
T cd05609          61 ----------PFVVSMFCSFET-------------KRHLCMVMEYVEGGDCATLLKNIGALPVDMARMYFAETVLALEYL  117 (305)
T ss_pred             ----------CCeeeeEEEEec-------------CCEEEEEEecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHH
Confidence                      999999988864             558999999999987765553   488999999999999999999


Q ss_pred             HhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecC--------------------CcE
Q psy9184         413 EVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVG--------------------EKI  472 (562)
Q Consensus       413 H~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~--------------------~g~  472 (562)
                      |+ .+|+||||||+||+++..+                    .++|+|||+++....                    ...
T Consensus       118 H~-~~i~H~dl~p~NIll~~~~--------------------~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  176 (305)
T cd05609         118 HN-YGIVHRDLKPDNLLITSMG--------------------HIKLTDFGLSKIGLMSLTTNLYEGHIEKDTREFLDKQV  176 (305)
T ss_pred             HH-CCccccCCchHHEEECCCC--------------------CEEEeeCCCccccCcCccccccccccccchhhccccCC
Confidence            99 7999999999999998876                    799999999874211                    011


Q ss_pred             EEeecCCCccccCC-CCCcHHHHHHHh
Q psy9184         473 CYYDLSQDEELFEG-EGDYQFDMYRMM  498 (562)
Q Consensus       473 v~~~l~~~pelF~g-~~~~q~dIy~lm  498 (562)
                      ..+..|.+||.+.+ ......|||++.
T Consensus       177 ~~~~~y~aPE~~~~~~~~~~~Di~slG  203 (305)
T cd05609         177 CGTPEYIAPEVILRQGYGKPVDWWAMG  203 (305)
T ss_pred             ccCccccCchhccCCCCCchhhHHHHH
Confidence            23456788987765 345568998753

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a

>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1

Probab=99.90  E-value=3.5e-23  Score=206.11  Aligned_cols=228  Identities=19%  Similarity=0.209  Sum_probs=164.8

Q ss_pred             CCceeeeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCcccccc
Q psy9184         262 ALKNCKKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTELL  335 (562)
Q Consensus       262 ~y~~~~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~l~  335 (562)
                      +|++.+.||.|+||.||+|      ..||+|++....     .......+.+.+|+.+++.++|                
T Consensus         1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~-----~~~~~~~~~~~~e~~~l~~l~h----------------   59 (258)
T cd05578           1 HFELLRVIGKGAFGKVCIVQKRDTKKMFAMKYMNKQK-----CVEKGSVRNVLNERRILQELNH----------------   59 (258)
T ss_pred             CceEEEEeccCCCceEEEEEEccCCcEEEEEEEehhh-----hcchhHHHHHHHHHHHHHhCCC----------------
Confidence            4789999999999999999      789999998653     2223456788999999999998                


Q ss_pred             cccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc---cCCHHHHHHHHHHHHHHHHHH
Q psy9184         336 KCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK---YRSPNQTYAMILQVVFSLAVA  412 (562)
Q Consensus       336 ~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~---~l~e~~i~~I~~QIl~aL~yL  412 (562)
                                |||+++++.+..             +..+|+||||+.|+++...+.   .+++.++..++.||+.||.||
T Consensus        60 ----------~~i~~~~~~~~~-------------~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~~i~~~l~~l  116 (258)
T cd05578          60 ----------PFLVNLWYSFQD-------------EENMYLVVDLLLGGDLRYHLSQKVKFSEEQVKFWICEIVLALEYL  116 (258)
T ss_pred             ----------CChHHHHHhhcC-------------CCeEEEEEeCCCCCCHHHHHHhcCCcCHHHHHHHHHHHHHHHHHH
Confidence                      999999999875             558999999999998766553   488999999999999999999


Q ss_pred             HhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecCC----cEEEeecCCCccccCCC-
Q psy9184         413 EVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVGE----KICYYDLSQDEELFEGE-  487 (562)
Q Consensus       413 H~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~~----g~v~~~l~~~pelF~g~-  487 (562)
                      |+ ++|+|+||+|+||+++.++                    .++|+|||++......    .......|.+||.+.+. 
T Consensus       117 h~-~~i~h~dl~~~nil~~~~~--------------------~~~l~d~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~  175 (258)
T cd05578         117 HS-KGIIHRDIKPDNILLDEQG--------------------HVHITDFNIATKVTPDTLTTSTSGTPGYMAPEVLCRQG  175 (258)
T ss_pred             Hh-CCeeccCCCHHHeEEcCCC--------------------CEEEeecccccccCCCccccccCCChhhcCHHHHcccC
Confidence            99 7999999999999999886                    7999999999876543    22334457788887764 


Q ss_pred             CCcHHHHHHHhhcccCCCCCCCCCCChhhh--HHHHHHHHhhcccCCCCCCCchhHHHHHHHHHHHhcCCCcCcCC
Q psy9184         488 GDYQFDMYRMMRKQCQNNWQNFTPKNNVFW--IHYLVDKATCLKKGYQYLRAPRHQAFELLEELGQNALHFDSCYE  561 (562)
Q Consensus       488 ~~~q~dIy~lm~~~~~~~W~~~~P~tn~~w--l~yl~~~Ll~~~~~~~~~~~~~~~~~~~l~~l~~~~l~~~s~~~  561 (562)
                      .+.+.|+|++. ......+.+..|+.....  ...+..........++.      ..-..+.+|..++|..+...|
T Consensus       176 ~~~~~Di~slG-~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~i~~~l~~~p~~R  244 (258)
T cd05578         176 YSVAVDWWSLG-VTAYECLRGKRPYRGHSRTIRDQIRAKQETADVLYPA------TWSTEAIDAINKLLERDPQKR  244 (258)
T ss_pred             CCCcccchhhH-HHHHHHHhCCCCCCCCCccHHHHHHHHhccccccCcc------cCcHHHHHHHHHHccCChhHc
Confidence            35568887753 232233344444432221  11111222210111111      113577778888888775544

Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.

>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1

Probab=99.90  E-value=2.9e-23  Score=213.17  Aligned_cols=173  Identities=20%  Similarity=0.252  Sum_probs=137.4

Q ss_pred             CCCCceeeeeeccCceEEEEE-------------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCC
Q psy9184         260 SSALKNCKKIGEGVYGEVFKL-------------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTEN  326 (562)
Q Consensus       260 ~~~y~~~~~LG~GsfG~Vyka-------------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n  326 (562)
                      .++|.+.+.||+|+||.||+|             ..+|+|.+....       .......+.+|+.+++.+..       
T Consensus        17 ~~~~~i~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~~aiK~~~~~~-------~~~~~~~~~~e~~~l~~l~~-------   82 (307)
T cd05098          17 RDRLVLGKPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDA-------TEKDLSDLISEMEMMKMIGK-------   82 (307)
T ss_pred             hHHeEEeeeeccCCCeeEEEeEEeccCCcccCccceEEEEeccCCC-------ChHHHHHHHHHHHHHHHhcC-------
Confidence            367899999999999999988             259999987542       12334678889999999943       


Q ss_pred             CCCcccccccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc---------------
Q psy9184         327 STPCFTELLKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK---------------  391 (562)
Q Consensus       327 ~~p~fv~l~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~---------------  391 (562)
                                        ||||+++++.+..             ++..|+||||+.+|++.+.+.               
T Consensus        83 ------------------h~~i~~~~~~~~~-------------~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~  131 (307)
T cd05098          83 ------------------HKNIINLLGACTQ-------------DGPLYVIVEYASKGNLREYLRARRPPGMEYCYNPTQ  131 (307)
T ss_pred             ------------------CCCEeeEEEEEec-------------CCceEEEEecCCCCcHHHHHHhcCCccccccccccc
Confidence                              3999999998865             458999999999997766553               


Q ss_pred             ----cCCHHHHHHHHHHHHHHHHHHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeee
Q psy9184         392 ----YRSPNQTYAMILQVVFSLAVAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCF  467 (562)
Q Consensus       392 ----~l~e~~i~~I~~QIl~aL~yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~  467 (562)
                          .+++.++..++.||+.||+|||+ +|++||||||+|||++.++                    .++|+|||+++..
T Consensus       132 ~~~~~l~~~~~~~~~~qi~~aL~~lH~-~gi~H~dlkp~Nill~~~~--------------------~~kL~dfg~a~~~  190 (307)
T cd05098         132 VPEEQLSFKDLVSCAYQVARGMEYLAS-KKCIHRDLAARNVLVTEDN--------------------VMKIADFGLARDI  190 (307)
T ss_pred             CccccCCHHHHHHHHHHHHHHHHHHHH-CCcccccccHHheEEcCCC--------------------cEEECCCcccccc
Confidence                26788999999999999999999 7999999999999998876                    7999999999865


Q ss_pred             cCC-----c--EEEeecCCCccccCC-CCCcHHHHHHHh
Q psy9184         468 VGE-----K--ICYYDLSQDEELFEG-EGDYQFDMYRMM  498 (562)
Q Consensus       468 ~~~-----g--~v~~~l~~~pelF~g-~~~~q~dIy~lm  498 (562)
                      ...     .  ......|++||.+.+ ..+...|+|++.
T Consensus       191 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG  229 (307)
T cd05098         191 HHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFG  229 (307)
T ss_pred             cccchhhccccCCCccceeChHHhccCCCCcHHHHHHHH
Confidence            421     1  112245788997655 455668998853

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A

Probab=99.89  E-value=7.9e-23  Score=207.02  Aligned_cols=227  Identities=16%  Similarity=0.130  Sum_probs=163.9

Q ss_pred             CCCceeeeeeccCceEEEEE-----------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCC
Q psy9184         261 SALKNCKKIGEGVYGEVFKL-----------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTP  329 (562)
Q Consensus       261 ~~y~~~~~LG~GsfG~Vyka-----------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p  329 (562)
                      .+|...++||+|+||.||++           ..+|+|.+....        ......+.+|+.+++.++|          
T Consensus         5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~--------~~~~~~~~~e~~~l~~l~h----------   66 (280)
T cd05092           5 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEAS--------ESARQDFQREAELLTVLQH----------   66 (280)
T ss_pred             HhceeccccCCccCCeEEEeEEecCCCCCCceEEEEEecCcCC--------HHHHHHHHHHHHHHhcCCC----------
Confidence            56788999999999999998           368888876432        3445678999999999998          


Q ss_pred             cccccccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc------------------
Q psy9184         330 CFTELLKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK------------------  391 (562)
Q Consensus       330 ~fv~l~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~------------------  391 (562)
                                      |||+++++++..             .+..|++|||+.+|++.+.+.                  
T Consensus        67 ----------------~~i~~~~~~~~~-------------~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~  117 (280)
T cd05092          67 ----------------QHIVRFYGVCTE-------------GRPLLMVFEYMRHGDLNRFLRSHGPDAKILAGGEDVAPG  117 (280)
T ss_pred             ----------------CCCceEEEEEec-------------CCceEEEEecCCCCCHHHHHHhcCcchhhhcccccCCcc
Confidence                            999999988764             457899999999998765542                  


Q ss_pred             cCCHHHHHHHHHHHHHHHHHHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecCC-
Q psy9184         392 YRSPNQTYAMILQVVFSLAVAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVGE-  470 (562)
Q Consensus       392 ~l~e~~i~~I~~QIl~aL~yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~~-  470 (562)
                      .+++..+..++.||+.||+|||+ .||+||||||+|||++.++                    .++|+|||+++..... 
T Consensus       118 ~l~~~~~~~~~~qi~~al~~LH~-~~i~H~dlkp~nil~~~~~--------------------~~kL~dfg~~~~~~~~~  176 (280)
T cd05092         118 QLTLGQMLAIASQIASGMVYLAS-LHFVHRDLATRNCLVGQGL--------------------VVKIGDFGMSRDIYSTD  176 (280)
T ss_pred             ccCHHHHHHHHHHHHHHHHHHHH-CCeecccccHhhEEEcCCC--------------------CEEECCCCceeEcCCCc
Confidence            26789999999999999999999 7999999999999998775                    7999999999865321 


Q ss_pred             ------cEEEeecCCCccccCC-CCCcHHHHHHHhhcccCCCCC-CCCCCChhhhHHHHHHHHhhcccCCCCCCCchhHH
Q psy9184         471 ------KICYYDLSQDEELFEG-EGDYQFDMYRMMRKQCQNNWQ-NFTPKNNVFWIHYLVDKATCLKKGYQYLRAPRHQA  542 (562)
Q Consensus       471 ------g~v~~~l~~~pelF~g-~~~~q~dIy~lm~~~~~~~W~-~~~P~tn~~wl~yl~~~Ll~~~~~~~~~~~~~~~~  542 (562)
                            .......|.+||.+.+ ..+...|||+++ ......|. +..|+....-... ...... +..+..+.    ..
T Consensus       177 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG-~il~el~~~g~~p~~~~~~~~~-~~~~~~-~~~~~~~~----~~  249 (280)
T cd05092         177 YYRVGGRTMLPIRWMPPESILYRKFTTESDIWSFG-VVLWEIFTYGKQPWYQLSNTEA-IECITQ-GRELERPR----TC  249 (280)
T ss_pred             eeecCCCccccccccCHHHhccCCcCchhhHHHHH-HHHHHHHcCCCCCCccCCHHHH-HHHHHc-CccCCCCC----CC
Confidence                  1222456889998776 356668998863 33334454 5556533221221 222222 22222221    12


Q ss_pred             HHHHHHHHHhcCCCcCcCCC
Q psy9184         543 FELLEELGQNALHFDSCYEM  562 (562)
Q Consensus       543 ~~~l~~l~~~~l~~~s~~~~  562 (562)
                      ...+.+|...+|+.+...|+
T Consensus       250 ~~~~~~li~~cl~~~P~~Rp  269 (280)
T cd05092         250 PPEVYAIMQGCWQREPQQRM  269 (280)
T ss_pred             CHHHHHHHHHHccCChhhCC
Confidence            34677888888888777653

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory

>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2

Probab=99.89  E-value=7.8e-23  Score=202.62  Aligned_cols=229  Identities=17%  Similarity=0.218  Sum_probs=165.0

Q ss_pred             CCceeeeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCcccccc
Q psy9184         262 ALKNCKKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTELL  335 (562)
Q Consensus       262 ~y~~~~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~l~  335 (562)
                      +|++.+.||.|+||.||+|      ..+|+|++....      ......+.+..|+.+++.++|                
T Consensus         1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~------~~~~~~~~~~~e~~~l~~l~~----------------   58 (265)
T cd08217           1 DYEVLETIGKGSFGTVRKVRRKSDGKILVWKEIDYGN------MTEKEKQQLVSEVNILRELKH----------------   58 (265)
T ss_pred             CceeeeeeccCCCeEEEEeeecCCCCEEEEEEEeccc------CCHHHHHHHHHHHHHHHhcCC----------------
Confidence            4788999999999999999      789999987653      124445678899999999998                


Q ss_pred             cccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc-------cCCHHHHHHHHHHHHHH
Q psy9184         336 KCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK-------YRSPNQTYAMILQVVFS  408 (562)
Q Consensus       336 ~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~-------~l~e~~i~~I~~QIl~a  408 (562)
                                |||+++++.+....           ...+|++|||+++|++.+.+.       .+++.+++.++.||+.|
T Consensus        59 ----------~~i~~~~~~~~~~~-----------~~~~~~~~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~  117 (265)
T cd08217          59 ----------PNIVRYYDRIIDRS-----------NQTLYIVMEYCEGGDLAQLIQKCKKERKYIEEEFIWRILTQLLLA  117 (265)
T ss_pred             ----------CccceeeeeeecCC-----------CCEEEEEehhccCCCHHHHHHHHhhcccCCCHHHHHHHHHHHHHH
Confidence                      99999988775422           457899999999997765552       47899999999999999


Q ss_pred             HHHHH-----hhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecCCc-----EEEeecC
Q psy9184         409 LAVAE-----VELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVGEK-----ICYYDLS  478 (562)
Q Consensus       409 L~yLH-----~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~~g-----~v~~~l~  478 (562)
                      |+|||     + .+|+||||||+||+++.++                    .++|+|||++.......     ...+..|
T Consensus       118 l~~lH~~~~~~-~~i~h~dl~p~nili~~~~--------------------~~kl~d~g~~~~~~~~~~~~~~~~~~~~~  176 (265)
T cd08217         118 LYECHNRSDPG-NTVLHRDLKPANIFLDANN--------------------NVKLGDFGLAKILGHDSSFAKTYVGTPYY  176 (265)
T ss_pred             HHHHhcCcccc-CcceecCCCHHHEEEecCC--------------------CEEEecccccccccCCcccccccccCCCc
Confidence            99999     8 6999999999999999876                    79999999998775432     2346678


Q ss_pred             CCccccCCC-CCcHHHHHHHhhcccCCCCCCCCCCChhhhHHHHHHHHhhcccCCCCCCCchhHHHHHHHHHHHhcCCCc
Q psy9184         479 QDEELFEGE-GDYQFDMYRMMRKQCQNNWQNFTPKNNVFWIHYLVDKATCLKKGYQYLRAPRHQAFELLEELGQNALHFD  557 (562)
Q Consensus       479 ~~pelF~g~-~~~q~dIy~lm~~~~~~~W~~~~P~tn~~wl~yl~~~Ll~~~~~~~~~~~~~~~~~~~l~~l~~~~l~~~  557 (562)
                      ++||.+.+. .+.+.|+|++.-... ..+.+..|+.... ..-+.+.... . .+....   ......+..|...+|..+
T Consensus       177 ~~pE~~~~~~~~~~~Dv~slG~il~-~l~~g~~p~~~~~-~~~~~~~~~~-~-~~~~~~---~~~~~~~~~l~~~~l~~~  249 (265)
T cd08217         177 MSPEQLNHMSYDEKSDIWSLGCLIY-ELCALSPPFTARN-QLQLASKIKE-G-KFRRIP---YRYSSELNEVIKSMLNVD  249 (265)
T ss_pred             cChhhhcCCCCCchhHHHHHHHHHH-HHHHCCCcccCcC-HHHHHHHHhc-C-CCCCCc---cccCHHHHHHHHHHccCC
Confidence            899988764 455689988643332 3344444543222 1112222222 1 111111   122356777788888877


Q ss_pred             CcCC
Q psy9184         558 SCYE  561 (562)
Q Consensus       558 s~~~  561 (562)
                      ...|
T Consensus       250 p~~R  253 (265)
T cd08217         250 PDKR  253 (265)
T ss_pred             cccC
Confidence            6655

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi

>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin

Probab=99.89  E-value=8.7e-23  Score=207.38  Aligned_cols=236  Identities=19%  Similarity=0.212  Sum_probs=166.8

Q ss_pred             CCCCCceeeeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCccc
Q psy9184         259 PSSALKNCKKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFT  332 (562)
Q Consensus       259 ~~~~y~~~~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv  332 (562)
                      +.++|.+.+.||+|+||.||+|      +.+|+|++....         .....+.+|+.+++.+.+             
T Consensus        20 ~~~~y~~~~~l~~g~~~~vy~~~~~~~~~~~aik~~~~~~---------~~~~~~~~e~~~l~~l~~-------------   77 (291)
T cd06639          20 PTDTWEIIETIGKGTYGKVYKVTNKKDGSLAAVKILDPIS---------DVDEEIEAEYNILQSLPN-------------   77 (291)
T ss_pred             CCCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEecccc---------cHHHHHHHHHHHHHHhcC-------------
Confidence            4578999999999999999999      789999986432         112456789999999943             


Q ss_pred             ccccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc-------cCCHHHHHHHHHHH
Q psy9184         333 ELLKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK-------YRSPNQTYAMILQV  405 (562)
Q Consensus       333 ~l~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~-------~l~e~~i~~I~~QI  405 (562)
                                  |||+++++++|....        ....+..|+||||++||++.+.+.       .+++..++.++.|+
T Consensus        78 ------------h~ni~~~~~~~~~~~--------~~~~~~~~lv~ey~~~~sL~~~~~~~~~~~~~~~~~~~~~~~~qi  137 (291)
T cd06639          78 ------------HPNVVKFYGMFYKAD--------KLVGGQLWLVLELCNGGSVTELVKGLLICGQRLDEAMISYILYGA  137 (291)
T ss_pred             ------------CCCeEEEEEEEEecc--------ccCCCeeEEEEEECCCCcHHHHHHHhhhcCCCCCHHHHHHHHHHH
Confidence                        399999999886421        112457899999999997765442       47899999999999


Q ss_pred             HHHHHHHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecC-----CcEEEeecCCC
Q psy9184         406 VFSLAVAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVG-----EKICYYDLSQD  480 (562)
Q Consensus       406 l~aL~yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~-----~g~v~~~l~~~  480 (562)
                      +.||.|||+ .+|+||||||+||+++.++                    .++|+|||+++....     ........|++
T Consensus       138 ~~al~~lH~-~~ivH~dlkp~nili~~~~--------------------~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~a  196 (291)
T cd06639         138 LLGLQHLHN-NRIIHRDVKGNNILLTTEG--------------------GVKLVDFGVSAQLTSTRLRRNTSVGTPFWMA  196 (291)
T ss_pred             HHHHHHHHh-CCeeccCCCHHHEEEcCCC--------------------CEEEeecccchhcccccccccCccCCccccC
Confidence            999999999 7999999999999998876                    699999999986543     22334566889


Q ss_pred             ccccCCC------CCcHHHHHHHhhcccCCCCCCCCCCChhhhHHHHHHHHhhcccCCCCCCCchhHHHHHHHHHHHhcC
Q psy9184         481 EELFEGE------GDYQFDMYRMMRKQCQNNWQNFTPKNNVFWIHYLVDKATCLKKGYQYLRAPRHQAFELLEELGQNAL  554 (562)
Q Consensus       481 pelF~g~------~~~q~dIy~lm~~~~~~~W~~~~P~tn~~wl~yl~~~Ll~~~~~~~~~~~~~~~~~~~l~~l~~~~l  554 (562)
                      ||.+.+.      .+.+.|||++. ........+..|+........+......   ..+... ...+....+.+|...++
T Consensus       197 PE~~~~~~~~~~~~~~~~Di~slG-vi~~el~~g~~p~~~~~~~~~~~~~~~~---~~~~~~-~~~~~~~~l~~li~~~l  271 (291)
T cd06639         197 PEVIACEQQYDYSYDARCDVWSLG-ITAIELGDGDPPLFDMHPVKTLFKIPRN---PPPTLL-HPEKWCRSFNHFISQCL  271 (291)
T ss_pred             hhhhcCCCCcccccCCccchHHHH-HHHHHHhhCCCCCCCCcHHHHHHHHhcC---CCCCCC-cccccCHHHHHHHHHHh
Confidence            9987653      24568998763 3333344555565433323222221111   111110 11123456888899999


Q ss_pred             CCcCcCCC
Q psy9184         555 HFDSCYEM  562 (562)
Q Consensus       555 ~~~s~~~~  562 (562)
                      +++...|+
T Consensus       272 ~~~p~~Rp  279 (291)
T cd06639         272 IKDFEARP  279 (291)
T ss_pred             hcChhhCc
Confidence            88877653

Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre

>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2

Probab=99.89  E-value=1.1e-22  Score=203.55  Aligned_cols=193  Identities=19%  Similarity=0.245  Sum_probs=147.4

Q ss_pred             CCCceeeeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCccccc
Q psy9184         261 SALKNCKKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTEL  334 (562)
Q Consensus       261 ~~y~~~~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~l  334 (562)
                      .+|++.+.||+|+||.||+|      ..||||.+......   .......+.+.+|+.+++.+.|               
T Consensus         2 ~~~~~~~~l~~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~---~~~~~~~~~~~~E~~~l~~l~h---------------   63 (265)
T cd06652           2 TNWRLGKLLGQGAFGRVYLCYDADTGRELAVKQVQFDPES---PETSKEVNALECEIQLLKNLLH---------------   63 (265)
T ss_pred             CcceEeeEEecCCceEEEEEEEcCCCcEEEEEEeecCcCC---cccHHHHHHHHHHHHHHHhcCC---------------
Confidence            46889999999999999999      78999998754211   1123345678899999999988               


Q ss_pred             ccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc---cCCHHHHHHHHHHHHHHHHH
Q psy9184         335 LKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK---YRSPNQTYAMILQVVFSLAV  411 (562)
Q Consensus       335 ~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~---~l~e~~i~~I~~QIl~aL~y  411 (562)
                                 |||+++++.+.+..           ...+|++|||++||++.+.+.   .+++..+..++.|++.||.|
T Consensus        64 -----------~~i~~~~~~~~~~~-----------~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~l~~~l~~  121 (265)
T cd06652          64 -----------ERIVQYYGCLRDPM-----------ERTLSIFMEHMPGGSIKDQLKSYGALTENVTRKYTRQILEGVSY  121 (265)
T ss_pred             -----------CCeeeEEeEeccCC-----------CceEEEEEEecCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHH
Confidence                       99999998876421           347899999999998766553   47889999999999999999


Q ss_pred             HHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecC--------CcEEEeecCCCccc
Q psy9184         412 AEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVG--------EKICYYDLSQDEEL  483 (562)
Q Consensus       412 LH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~--------~g~v~~~l~~~pel  483 (562)
                      ||+ .+|+|+||||+|||++.++                    .++|+|||+++....        .....+..|++||.
T Consensus       122 lH~-~~i~H~dl~p~nil~~~~~--------------------~~~l~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~  180 (265)
T cd06652         122 LHS-NMIVHRDIKGANILRDSVG--------------------NVKLGDFGASKRLQTICLSGTGMKSVTGTPYWMSPEV  180 (265)
T ss_pred             HHh-CCEecCCCCHHHEEecCCC--------------------CEEECcCccccccccccccccccccCCCCccccChhh
Confidence            999 7999999999999998876                    799999999986532        11224556889998


Q ss_pred             cCCC-CCcHHHHHHHhhcccCCCCCCCCCCChh
Q psy9184         484 FEGE-GDYQFDMYRMMRKQCQNNWQNFTPKNNV  515 (562)
Q Consensus       484 F~g~-~~~q~dIy~lm~~~~~~~W~~~~P~tn~  515 (562)
                      +.+. .+...|+|++. ........+..|+.+.
T Consensus       181 ~~~~~~~~~~Dv~slG-~il~el~~g~~p~~~~  212 (265)
T cd06652         181 ISGEGYGRKADIWSVG-CTVVEMLTEKPPWAEF  212 (265)
T ss_pred             hcCCCCCcchhHHHHH-HHHHHHhhCCCCCCcc
Confidence            8763 34558998763 3333334455555443

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re

>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases

Probab=99.89  E-value=9.1e-23  Score=204.31  Aligned_cols=170  Identities=21%  Similarity=0.219  Sum_probs=137.6

Q ss_pred             CCCceeeeeeccCceEEEEE---------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCcc
Q psy9184         261 SALKNCKKIGEGVYGEVFKL---------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCF  331 (562)
Q Consensus       261 ~~y~~~~~LG~GsfG~Vyka---------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~f  331 (562)
                      ++|++.+.||+|+||.||+|         ..||+|+++...       .......+.+|+.+++.++|            
T Consensus         4 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaik~~~~~~-------~~~~~~~~~~e~~~l~~l~h------------   64 (266)
T cd05033           4 SYVTIEKVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGS-------SDKQRLDFLTEASIMGQFDH------------   64 (266)
T ss_pred             HHceeeeEecCCccceEEEEEEccCCCCcceEEEEEcCCCC-------ChHHHHHHHHHHHHHHhCCC------------
Confidence            56889999999999999998         368999887542       23334578899999999998            


Q ss_pred             cccccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc----cCCHHHHHHHHHHHHH
Q psy9184         332 TELLKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK----YRSPNQTYAMILQVVF  407 (562)
Q Consensus       332 v~l~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~----~l~e~~i~~I~~QIl~  407 (562)
                                    |||+++++.+..             .+..|++|||+++|++.+.+.    .+++.++..++.|++.
T Consensus        65 --------------~~i~~~~~~~~~-------------~~~~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~  117 (266)
T cd05033          65 --------------PNIIRLEGVVTK-------------SRPVMIITEYMENGSLDKFLRENDGKFTVGQLVGMLRGIAS  117 (266)
T ss_pred             --------------CCcceEeEEEec-------------CCceEEEEEcCCCCCHHHHHHhccCCCCHHHHHHHHHHHHH
Confidence                          999999988764             457899999999987765553    4789999999999999


Q ss_pred             HHHHHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecC-CcEE------EeecCCC
Q psy9184         408 SLAVAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVG-EKIC------YYDLSQD  480 (562)
Q Consensus       408 aL~yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~-~g~v------~~~l~~~  480 (562)
                      ||.|||+ .+|+||||||+|||++.++                    .++|+|||+++.... .++.      ....|++
T Consensus       118 ~l~~Lh~-~~i~H~di~p~nili~~~~--------------------~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~~  176 (266)
T cd05033         118 GMKYLSE-MNYVHRDLAARNILVNSNL--------------------VCKVSDFGLSRRLEDSEATYTTKGGKIPIRWTA  176 (266)
T ss_pred             HHHHHHh-CCcccCCCCcceEEEcCCC--------------------CEEECccchhhcccccccceeccCCCCCccccC
Confidence            9999999 7999999999999998876                    799999999998752 2211      1235788


Q ss_pred             ccccCC-CCCcHHHHHHH
Q psy9184         481 EELFEG-EGDYQFDMYRM  497 (562)
Q Consensus       481 pelF~g-~~~~q~dIy~l  497 (562)
                      ||.+.+ ..+...|+|++
T Consensus       177 Pe~~~~~~~~~~~Dv~sl  194 (266)
T cd05033         177 PEAIAYRKFTSASDVWSF  194 (266)
T ss_pred             hhhhccCCCccccchHHH
Confidence            887765 34556888875

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment

>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4

Probab=99.89  E-value=7.6e-23  Score=205.60  Aligned_cols=229  Identities=17%  Similarity=0.141  Sum_probs=160.3

Q ss_pred             CCCCceeeeeeccCceEEEEE-----------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCC
Q psy9184         260 SSALKNCKKIGEGVYGEVFKL-----------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENST  328 (562)
Q Consensus       260 ~~~y~~~~~LG~GsfG~Vyka-----------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~  328 (562)
                      .++|+....||+|+||.||+|           ..+|+|.+....       .......+.+|+.++++++|         
T Consensus         4 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~-------~~~~~~~~~~E~~~l~~l~h---------   67 (275)
T cd05046           4 RSNLQEITTLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTK-------DENLQSEFRRELDMFRKLSH---------   67 (275)
T ss_pred             hHhceeeeeecccceeEEEEEEeccCCcCCCcceEEEEccCCcc-------chHHHHHHHHHHHHHHhcCC---------
Confidence            367899999999999999998           468888876532       12345678899999999998         


Q ss_pred             CcccccccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc------------cCCHH
Q psy9184         329 PCFTELLKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK------------YRSPN  396 (562)
Q Consensus       329 p~fv~l~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~------------~l~e~  396 (562)
                                       |||+++++++.+             .+..|+||||+++|++.+.+.            .+++.
T Consensus        68 -----------------~~iv~~~~~~~~-------------~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~l~~~  117 (275)
T cd05046          68 -----------------KNVVRLLGLCRE-------------AEPHYMILEYTDLGDLKQFLRATKSKDEKLKPPPLSTK  117 (275)
T ss_pred             -----------------cceeeeEEEECC-------------CCcceEEEEecCCCcHHHHHHhcccccccccccCCCHH
Confidence                             999999988764             457899999999998766543            37899


Q ss_pred             HHHHHHHHHHHHHHHHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecC------C
Q psy9184         397 QTYAMILQVVFSLAVAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVG------E  470 (562)
Q Consensus       397 ~i~~I~~QIl~aL~yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~------~  470 (562)
                      .+..++.||+.||.|||+ .+|+||||||+|||++.++                    .++|+|||+++....      .
T Consensus       118 ~~~~~~~~l~~~l~~LH~-~~i~H~dlkp~Nili~~~~--------------------~~~l~~~~~~~~~~~~~~~~~~  176 (275)
T cd05046         118 QKVALCTQIALGMDHLSN-ARFVHRDLAARNCLVSSQR--------------------EVKVSLLSLSKDVYNSEYYKLR  176 (275)
T ss_pred             HHHHHHHHHHHHHHHhhh-cCcccCcCccceEEEeCCC--------------------cEEEcccccccccCcccccccC
Confidence            999999999999999999 7999999999999998886                    699999999875432      2


Q ss_pred             cEEEeecCCCccccCC-CCCcHHHHHHHhhcccCCCCC-CCCCCChhhhHHHHHHHHhhcccCCCCCCCchhHHHHHHHH
Q psy9184         471 KICYYDLSQDEELFEG-EGDYQFDMYRMMRKQCQNNWQ-NFTPKNNVFWIHYLVDKATCLKKGYQYLRAPRHQAFELLEE  548 (562)
Q Consensus       471 g~v~~~l~~~pelF~g-~~~~q~dIy~lm~~~~~~~W~-~~~P~tn~~wl~yl~~~Ll~~~~~~~~~~~~~~~~~~~l~~  548 (562)
                      .......|++||...+ ......|||+++-... ..|. +..|+.......++...... ...+....    ..-..+.+
T Consensus       177 ~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~-~l~~~~~~p~~~~~~~~~~~~~~~~-~~~~~~~~----~~~~~l~~  250 (275)
T cd05046         177 NALIPLRWLAPEAVQEDDFSTKSDVWSFGVLMW-EVFTQGELPFYGLSDEEVLNRLQAG-KLELPVPE----GCPSRLYK  250 (275)
T ss_pred             CceeEEeecChhhhccCCCCchhhHHHHHHHHH-HHHhCCCCCccccchHHHHHHHHcC-CcCCCCCC----CCCHHHHH
Confidence            2334556888997655 3455689988654432 2222 33344322222222221111 11111111    11245666


Q ss_pred             HHHhcCCCcCcCC
Q psy9184         549 LGQNALHFDSCYE  561 (562)
Q Consensus       549 l~~~~l~~~s~~~  561 (562)
                      |...+|.++...|
T Consensus       251 ~i~~~l~~~p~~R  263 (275)
T cd05046         251 LMTRCWAVNPKDR  263 (275)
T ss_pred             HHHHHcCCCcccC
Confidence            7777777766544

Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s

>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl

Probab=99.89  E-value=1e-22  Score=204.11  Aligned_cols=176  Identities=18%  Similarity=0.192  Sum_probs=132.5

Q ss_pred             ceeeeeeccCceEEEEE--------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCcccccc
Q psy9184         264 KNCKKIGEGVYGEVFKL--------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTELL  335 (562)
Q Consensus       264 ~~~~~LG~GsfG~Vyka--------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~l~  335 (562)
                      .+.+.||+|+||.||+|        ..+|+|.++...      ......+.+.+|+.+++.++|                
T Consensus         2 ~i~~~ig~G~~g~V~~~~~~~~~~~~~~a~k~~~~~~------~~~~~~~~~~~E~~~l~~l~h----------------   59 (272)
T cd05075           2 ALGKTLGEGEFGSVMEGQLNQDDSILKVAVKTMKIAI------CTRSEMEDFLSEAVCMKEFDH----------------   59 (272)
T ss_pred             ccccccCcccCceEEEeEEccCCCeeeEEEEecccCc------CCHHHHHHHHHHHHHHHhCCC----------------
Confidence            45689999999999999        268999887642      123445778899999999998                


Q ss_pred             cccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCcccc---------ccCCHHHHHHHHHHHH
Q psy9184         336 KCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDI---------KYRSPNQTYAMILQVV  406 (562)
Q Consensus       336 ~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l---------~~l~e~~i~~I~~QIl  406 (562)
                                |||+++++.+......       ......+++|||+.+|++...+         ..+++..+..++.||+
T Consensus        60 ----------~~iv~~~~~~~~~~~~-------~~~~~~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~  122 (272)
T cd05075          60 ----------PNVMRLIGVCLQTVES-------EGYPSPVVILPFMKHGDLHSFLLYSRLGDCPQYLPTQMLVKFMTDIA  122 (272)
T ss_pred             ----------CCcceEEEEEccCCcc-------cCCCCcEEEEEeCCCCcHHHHHHHhcccCCcccCCHHHHHHHHHHHH
Confidence                      8888888765321100       0123579999999999765433         1278999999999999


Q ss_pred             HHHHHHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecCCcE-------EEeecCC
Q psy9184         407 FSLAVAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVGEKI-------CYYDLSQ  479 (562)
Q Consensus       407 ~aL~yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~~g~-------v~~~l~~  479 (562)
                      .||+|||+ .+|+||||||+|||++.++                    .++|+|||+++.......       .....|+
T Consensus       123 ~~l~~lH~-~~i~H~dlkp~Nil~~~~~--------------------~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~  181 (272)
T cd05075         123 SGMEYLSS-KSFIHRDLAARNCMLNENM--------------------NVCVADFGLSKKIYNGDYYRQGRIAKMPVKWI  181 (272)
T ss_pred             HHHHHHHH-CCeeccccchhheEEcCCC--------------------CEEECCCCcccccCcccceecCCcccCCcccC
Confidence            99999999 7999999999999998776                    799999999987643211       1123466


Q ss_pred             CccccCCC-CCcHHHHHHHhh
Q psy9184         480 DEELFEGE-GDYQFDMYRMMR  499 (562)
Q Consensus       480 ~pelF~g~-~~~q~dIy~lm~  499 (562)
                      +||...+. ...+.|||++.-
T Consensus       182 ~pe~~~~~~~~~~~Di~slG~  202 (272)
T cd05075         182 AIESLADRVYTTKSDVWSFGV  202 (272)
T ss_pred             CHHHccCCCcChHHHHHHHHH
Confidence            77776653 455689988643

Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor

>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases

Probab=99.89  E-value=1.1e-22  Score=202.71  Aligned_cols=227  Identities=20%  Similarity=0.180  Sum_probs=161.6

Q ss_pred             CCCCCceeeeeeccCceEEEEE-----eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCcccc
Q psy9184         259 PSSALKNCKKIGEGVYGEVFKL-----NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTE  333 (562)
Q Consensus       259 ~~~~y~~~~~LG~GsfG~Vyka-----~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~  333 (562)
                      +.++|.+.++||+|+||.||+|     ..+|+|.+....         .....+.+|+.+++.++|              
T Consensus         4 ~~~~~~i~~~ig~g~~~~v~~~~~~~~~~~~vK~~~~~~---------~~~~~~~~e~~~l~~l~h--------------   60 (261)
T cd05034           4 PRESLKLERKLGAGQFGEVWMGTWNGTTKVAVKTLKPGT---------MSPEAFLQEAQIMKKLRH--------------   60 (261)
T ss_pred             chhheeeeeeeccCcceEEEEEEEcCCceEEEEEecCCc---------cCHHHHHHHHHHHhhCCC--------------
Confidence            4578999999999999999999     679999987542         112467899999999998              


Q ss_pred             cccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc-----cCCHHHHHHHHHHHHHH
Q psy9184         334 LLKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK-----YRSPNQTYAMILQVVFS  408 (562)
Q Consensus       334 l~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~-----~l~e~~i~~I~~QIl~a  408 (562)
                                  |||+++++.+..             +...|+||||+.+|++.+.+.     .+++..+..++.||+.|
T Consensus        61 ------------~~i~~~~~~~~~-------------~~~~~~v~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~i~~a  115 (261)
T cd05034          61 ------------DKLVQLYAVCSE-------------EEPIYIVTEYMSKGSLLDFLKSGEGKKLRLPQLVDMAAQIAEG  115 (261)
T ss_pred             ------------CCEeeeeeeeec-------------CCceEEEEeccCCCCHHHHHhccccCCCCHHHHHHHHHHHHHH
Confidence                        999999988764             457899999999998876653     37899999999999999


Q ss_pred             HHHHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecCC------cEEEeecCCCcc
Q psy9184         409 LAVAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVGE------KICYYDLSQDEE  482 (562)
Q Consensus       409 L~yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~~------g~v~~~l~~~pe  482 (562)
                      |.|||+ .+|+||||||+||+++.++                    .++|+|||+++.....      +......|.+||
T Consensus       116 l~~lh~-~~i~h~di~p~nili~~~~--------------------~~~l~d~g~~~~~~~~~~~~~~~~~~~~~y~~PE  174 (261)
T cd05034         116 MAYLES-RNYIHRDLAARNILVGENL--------------------VCKIADFGLARLIEDDEYTAREGAKFPIKWTAPE  174 (261)
T ss_pred             HHHHHh-CCcccCCcchheEEEcCCC--------------------CEEECccccceeccchhhhhhhccCCCccccCHH
Confidence            999999 7999999999999999886                    7999999999876531      112234578899


Q ss_pred             ccCC-CCCcHHHHHHHhhcccCCCCC-CCCCCChhhhHHHHHHHHhhcccCCCCCCCchhHHHHHHHHHHHhcCCCcCcC
Q psy9184         483 LFEG-EGDYQFDMYRMMRKQCQNNWQ-NFTPKNNVFWIHYLVDKATCLKKGYQYLRAPRHQAFELLEELGQNALHFDSCY  560 (562)
Q Consensus       483 lF~g-~~~~q~dIy~lm~~~~~~~W~-~~~P~tn~~wl~yl~~~Ll~~~~~~~~~~~~~~~~~~~l~~l~~~~l~~~s~~  560 (562)
                      .+.+ ....+.|+|++.-... ..+. +..|+.....-. ....+.. ....+.+..    .-..+.++..++++.+...
T Consensus       175 ~~~~~~~~~~~Di~slG~il~-~l~t~g~~p~~~~~~~~-~~~~~~~-~~~~~~~~~----~~~~~~~~i~~~l~~~p~~  247 (261)
T cd05034         175 AANYGRFTIKSDVWSFGILLT-EIVTYGRVPYPGMTNRE-VLEQVER-GYRMPRPPN----CPEELYDLMLQCWDKDPEE  247 (261)
T ss_pred             HhccCCcCchhHHHHHHHHHH-HHHhCCCCCCCCCCHHH-HHHHHHc-CCCCCCCCC----CCHHHHHHHHHHcccCccc
Confidence            8776 3455689988643332 2222 444543322111 1222222 111111110    1235666777777766655


Q ss_pred             C
Q psy9184         561 E  561 (562)
Q Consensus       561 ~  561 (562)
                      |
T Consensus       248 R  248 (261)
T cd05034         248 R  248 (261)
T ss_pred             C
Confidence            4

Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t

>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk

Probab=99.89  E-value=6.9e-23  Score=204.49  Aligned_cols=171  Identities=26%  Similarity=0.308  Sum_probs=139.4

Q ss_pred             CCCCCceeeeeeccCceEEEEE-----eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCcccc
Q psy9184         259 PSSALKNCKKIGEGVYGEVFKL-----NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTE  333 (562)
Q Consensus       259 ~~~~y~~~~~LG~GsfG~Vyka-----~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~  333 (562)
                      +.++|++.++||+|+||.||+|     +.||+|.+....         ....++.+|+.+++.++|              
T Consensus         4 ~~~~~~~~~~ig~G~~g~v~~~~~~~~~~~a~K~~~~~~---------~~~~~~~~E~~~l~~l~h--------------   60 (260)
T cd05067           4 PRETLKLVKKLGAGQFGEVWMGYYNGHTKVAIKSLKQGS---------MSPEAFLAEANLMKQLQH--------------   60 (260)
T ss_pred             chHHceeeeeeccCccceEEeeecCCCceEEEEEecCCC---------CcHHHHHHHHHHHHhcCC--------------
Confidence            3467899999999999999999     789999987543         112467899999999998              


Q ss_pred             cccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc-----cCCHHHHHHHHHHHHHH
Q psy9184         334 LLKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK-----YRSPNQTYAMILQVVFS  408 (562)
Q Consensus       334 l~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~-----~l~e~~i~~I~~QIl~a  408 (562)
                                  |||+++++.+.              .+..|++|||+.+|++.+.+.     .+++.++..++.|++.|
T Consensus        61 ------------~~i~~~~~~~~--------------~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~a  114 (260)
T cd05067          61 ------------PRLVRLYAVVT--------------QEPIYIITEYMENGSLVDFLKTPEGIKLTINKLIDMAAQIAEG  114 (260)
T ss_pred             ------------cCeeeEEEEEc--------------cCCcEEEEEcCCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHH
Confidence                        99999988764              346899999999998877653     37889999999999999


Q ss_pred             HHHHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecC------CcEEEeecCCCcc
Q psy9184         409 LAVAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVG------EKICYYDLSQDEE  482 (562)
Q Consensus       409 L~yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~------~g~v~~~l~~~pe  482 (562)
                      |+|||+ .|++||||||+||+++.++                    .++|+|||+++....      .+..+...|++||
T Consensus       115 l~~LH~-~~i~H~dl~p~ni~i~~~~--------------------~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~~pe  173 (260)
T cd05067         115 MAFIER-KNYIHRDLRAANILVSETL--------------------CCKIADFGLARLIEDNEYTAREGAKFPIKWTAPE  173 (260)
T ss_pred             HHHHhc-CCeecccccHHhEEEcCCC--------------------CEEEccCcceeecCCCCcccccCCcccccccCHH
Confidence            999999 7999999999999999876                    799999999987652      1223345688899


Q ss_pred             ccCC-CCCcHHHHHHHhh
Q psy9184         483 LFEG-EGDYQFDMYRMMR  499 (562)
Q Consensus       483 lF~g-~~~~q~dIy~lm~  499 (562)
                      .+.+ ......|||+++-
T Consensus       174 ~~~~~~~~~~~Di~slG~  191 (260)
T cd05067         174 AINYGTFTIKSDVWSFGI  191 (260)
T ss_pred             HhccCCcCcccchHHHHH
Confidence            7765 3455689988643

Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr

>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8

Probab=99.89  E-value=8.2e-23  Score=202.37  Aligned_cols=228  Identities=20%  Similarity=0.241  Sum_probs=163.4

Q ss_pred             CCceeeeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCcccccc
Q psy9184         262 ALKNCKKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTELL  335 (562)
Q Consensus       262 ~y~~~~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~l~  335 (562)
                      +|+..+.||+|+||.||+|      +.+|+|.+.....      .......+.+|+.+++.++|                
T Consensus         1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~------~~~~~~~~~~e~~~l~~~~~----------------   58 (256)
T cd08220           1 KYEKIRVVGRGAFGIVHLCRRKADQKLVIIKQIPVEQM------TKDERLAAQNECQVLKLLSH----------------   58 (256)
T ss_pred             CceEEEEecccCceEEEEEEEcCCCcEEEEEEEecccc------ccHHHHHHHHHHHHHhhCCC----------------
Confidence            4788999999999999998      8899999986531      22334678899999999998                


Q ss_pred             cccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc-----cCCHHHHHHHHHHHHHHHH
Q psy9184         336 KCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK-----YRSPNQTYAMILQVVFSLA  410 (562)
Q Consensus       336 ~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~-----~l~e~~i~~I~~QIl~aL~  410 (562)
                                ||++++++.+..             ++.+++||||++||++.+.+.     .+++..+..++.|++.||.
T Consensus        59 ----------~~i~~~~~~~~~-------------~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~  115 (256)
T cd08220          59 ----------PNIIEYYENFLE-------------DKALMIVMEYAPGGTLAEYIQKRCNSLLDEDTILHFFVQILLALH  115 (256)
T ss_pred             ----------CchhheeeeEec-------------CCEEEEEEecCCCCCHHHHHHHhcccCCCHHHHHHHHHHHHHHHH
Confidence                      999999988764             558999999999998766553     2789999999999999999


Q ss_pred             HHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecCC----cEEEeecCCCccccCC
Q psy9184         411 VAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVGE----KICYYDLSQDEELFEG  486 (562)
Q Consensus       411 yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~~----g~v~~~l~~~pelF~g  486 (562)
                      |||+ +||+||||||+||+++.++.                   .++|+|||+++.....    .......|++||.+.+
T Consensus       116 ~lh~-~~i~h~dl~~~nil~~~~~~-------------------~~~l~d~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~  175 (256)
T cd08220         116 HVHT-KLILHRDLKTQNILLDKHKM-------------------VVKIGDFGISKILSSKSKAYTVVGTPCYISPELCEG  175 (256)
T ss_pred             HHHh-CCeecCCCCHHHEEEcCCCC-------------------EEEEccCCCceecCCCccccccccCCcccCchhccC
Confidence            9999 79999999999999986642                   6899999999876542    2345667899998876


Q ss_pred             C-CCcHHHHHHHhhcccCCCCCCCCCCChhhhHHHHHHHHhhcccCCCCCCCchhHHHHHHHHHHHhcCCCcCcCC
Q psy9184         487 E-GDYQFDMYRMMRKQCQNNWQNFTPKNNVFWIHYLVDKATCLKKGYQYLRAPRHQAFELLEELGQNALHFDSCYE  561 (562)
Q Consensus       487 ~-~~~q~dIy~lm~~~~~~~W~~~~P~tn~~wl~yl~~~Ll~~~~~~~~~~~~~~~~~~~l~~l~~~~l~~~s~~~  561 (562)
                      . .+.+.|+|++. ......+.+..|+.... .......... . .+....   ...-..+.++...++..+...|
T Consensus       176 ~~~~~~~Dv~slG-~~l~~l~~~~~~~~~~~-~~~~~~~~~~-~-~~~~~~---~~~~~~l~~li~~~l~~~p~~R  244 (256)
T cd08220         176 KPYNQKSDIWALG-CVLYELASLKRAFEAAN-LPALVLKIMS-G-TFAPIS---DRYSPDLRQLILSMLNLDPSKR  244 (256)
T ss_pred             CCCCcccchHHHH-HHHHHHHhCCCCcccCc-hHHHHHHHHh-c-CCCCCC---CCcCHHHHHHHHHHccCChhhC
Confidence            4 34568888753 33223344444443221 1111222222 1 111111   1123467778888888776654

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with

>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases

Probab=99.89  E-value=5.8e-23  Score=206.09  Aligned_cols=165  Identities=16%  Similarity=0.150  Sum_probs=127.9

Q ss_pred             eeeeccCceEEEEE--------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCccccccccc
Q psy9184         267 KKIGEGVYGEVFKL--------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTELLKCS  338 (562)
Q Consensus       267 ~~LG~GsfG~Vyka--------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~l~~~~  338 (562)
                      +.||+|+||.||+|        ..+|+|.+....       .......+.+|+.+++.++|                   
T Consensus         1 ~~lg~G~fg~v~~~~~~~~~~~~~~~~k~~~~~~-------~~~~~~~~~~e~~~~~~l~h-------------------   54 (269)
T cd05042           1 DEIGNGWFGKVLLGEAHRGMSKARVVVKELRASA-------TPDEQLLFLQEVQPYRELNH-------------------   54 (269)
T ss_pred             CcCCccCCceEEEEEEecCCCCeEEEEeecCccC-------ChHHHHHHHHHHHHHHhCCC-------------------
Confidence            36999999999998        467788765432       22334567899999999988                   


Q ss_pred             ccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCcccccc--------CCHHHHHHHHHHHHHHHH
Q psy9184         339 CVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIKY--------RSPNQTYAMILQVVFSLA  410 (562)
Q Consensus       339 iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~~--------l~e~~i~~I~~QIl~aL~  410 (562)
                             |||+++++.+..             ....|+||||+.+|++.+.+..        .++..+..++.||+.||+
T Consensus        55 -------~nii~~~~~~~~-------------~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~  114 (269)
T cd05042          55 -------PNVLQCLGQCIE-------------SIPYLLVLEFCPLGDLKNYLRSNRGMVAQMAQKDVLQRMACEVASGLL  114 (269)
T ss_pred             -------CCcceEEEEECC-------------CCceEEEEEeCCCCcHHHHHHhccccccccccHHHHHHHHHHHHHHHH
Confidence                   999999988764             4579999999999987665421        457788999999999999


Q ss_pred             HHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecC-------CcEEEeecCCCccc
Q psy9184         411 VAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVG-------EKICYYDLSQDEEL  483 (562)
Q Consensus       411 yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~-------~g~v~~~l~~~pel  483 (562)
                      |||+ .+|+||||||+|||++.++                    .+||+|||+++....       .+...+..|++||+
T Consensus       115 ~lH~-~~ivH~dlkp~Nill~~~~--------------------~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~  173 (269)
T cd05042         115 WLHQ-ADFIHSDLALRNCQLTADL--------------------SVKIGDYGLALEQYPEDYYITKDCHAVPLRWLAPEL  173 (269)
T ss_pred             HHHh-cCEecccccHhheEecCCC--------------------cEEEeccccccccccchheeccCCCCCcccccCHHH
Confidence            9999 7999999999999999886                    799999999975432       11222345788997


Q ss_pred             cCC--------CCCcHHHHHHHh
Q psy9184         484 FEG--------EGDYQFDMYRMM  498 (562)
Q Consensus       484 F~g--------~~~~q~dIy~lm  498 (562)
                      +..        ..+...|||++.
T Consensus       174 ~~~~~~~~~~~~~~~~~DiwslG  196 (269)
T cd05042         174 VEIRGQDLLPKDQTKKSNIWSLG  196 (269)
T ss_pred             HhhccccccccccchhhHHHHHH
Confidence            643        234458998854

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina

>KOG4236|consensus

Probab=99.89  E-value=4.6e-23  Score=217.75  Aligned_cols=168  Identities=18%  Similarity=0.280  Sum_probs=140.0

Q ss_pred             eeeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCcccccccccc
Q psy9184         266 CKKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTELLKCSC  339 (562)
Q Consensus       266 ~~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~l~~~~i  339 (562)
                      .++||.|.||.||-|      +.||||+|.+..      ...+....+.+|+.||+.+.|                    
T Consensus       569 devLGSGQFG~VYgg~hRktGrdVAvKvIdKlr------Fp~kqesqlR~EVaILq~l~H--------------------  622 (888)
T KOG4236|consen  569 DEVLGSGQFGTVYGGKHRKTGRDVAVKVIDKLR------FPTKQESQLRNEVAILQNLHH--------------------  622 (888)
T ss_pred             HhhccCCcceeeecceecccCceeeeeeeeccc------CCCchHHHHHHHHHHHHhcCC--------------------
Confidence            378999999999999      899999998764      233444678899999999998                    


Q ss_pred             cCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc-----cCCHHHHHHHHHHHHHHHHHHHh
Q psy9184         340 VRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK-----YRSPNQTYAMILQVVFSLAVAEV  414 (562)
Q Consensus       340 v~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~-----~l~e~~i~~I~~QIl~aL~yLH~  414 (562)
                            |.||.+-..|++             .+.+|.|||.+. |+.++-+.     ++++...+.++.||+.||.|||.
T Consensus       623 ------PGiV~le~M~ET-------------~ervFVVMEKl~-GDMLEMILSsEkgRL~er~TkFlvtQIL~ALr~LH~  682 (888)
T KOG4236|consen  623 ------PGIVNLECMFET-------------PERVFVVMEKLH-GDMLEMILSSEKGRLPERITKFLVTQILVALRYLHF  682 (888)
T ss_pred             ------CCeeEEEEeecC-------------CceEEEEehhhc-chHHHHHHHhhcccchHHHHHHHHHHHHHHHHHhhh
Confidence                  999999988886             569999999997 56666553     59999999999999999999999


Q ss_pred             hCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecC----CcEEEeecCCCccccCCCC-C
Q psy9184         415 ELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVG----EKICYYDLSQDEELFEGEG-D  489 (562)
Q Consensus       415 ~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~----~g~v~~~l~~~pelF~g~~-~  489 (562)
                       .+|+|+||||+|||+.....-                 .++||||||+||.+.+    ..+++++.|.+||++...+ +
T Consensus       683 -knIvHCDLKPENVLLas~~~F-----------------PQvKlCDFGfARiIgEksFRrsVVGTPAYLaPEVLrnkGyN  744 (888)
T KOG4236|consen  683 -KNIVHCDLKPENVLLASASPF-----------------PQVKLCDFGFARIIGEKSFRRSVVGTPAYLAPEVLRNKGYN  744 (888)
T ss_pred             -cceeeccCCchheeeccCCCC-----------------CceeeccccceeecchhhhhhhhcCCccccCHHHHhhcccc
Confidence             699999999999999877431                 1799999999999986    4678888899998877654 3


Q ss_pred             cHHHHHHH
Q psy9184         490 YQFDMYRM  497 (562)
Q Consensus       490 ~q~dIy~l  497 (562)
                      -.-|+|+.
T Consensus       745 rSLDMWSV  752 (888)
T KOG4236|consen  745 RSLDMWSV  752 (888)
T ss_pred             ccccceee
Confidence            23566553

>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin

Probab=99.89  E-value=9.2e-23  Score=206.16  Aligned_cols=234  Identities=20%  Similarity=0.228  Sum_probs=161.0

Q ss_pred             CCCCCceeeeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcC-CccccCCCCCCcc
Q psy9184         259 PSSALKNCKKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETS-DLQYRTENSTPCF  331 (562)
Q Consensus       259 ~~~~y~~~~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~-h~~~~~~n~~p~f  331 (562)
                      +.++|++.+.||+|+||.||+|      +.+|+|++....         .....+.+|+.+++.+. |            
T Consensus        16 ~~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~---------~~~~~~~~e~~~l~~l~~h------------   74 (286)
T cd06638          16 PSDTWEIIETIGKGTYGKVFKVLNKKNGSKAAVKILDPIH---------DIDEEIEAEYNILKALSDH------------   74 (286)
T ss_pred             cccceeeeeeeccCCCcEEEEEEECCCCceeEEEeecccc---------chHHHHHHHHHHHHHHhcC------------
Confidence            4578999999999999999998      789999876432         11245678999999994 6            


Q ss_pred             cccccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCcccc-------ccCCHHHHHHHHHH
Q psy9184         332 TELLKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDI-------KYRSPNQTYAMILQ  404 (562)
Q Consensus       332 v~l~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l-------~~l~e~~i~~I~~Q  404 (562)
                                    |||+++++.+....        ...++.+|+||||++||++.+.+       ..+++..+..++.|
T Consensus        75 --------------~~i~~~~~~~~~~~--------~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~  132 (286)
T cd06638          75 --------------PNVVKFYGMYYKKD--------VKNGDQLWLVLELCNGGSVTDLVKGFLKRGERMEEPIIAYILHE  132 (286)
T ss_pred             --------------CCeeeeeeeeeecc--------cCCCCeEEEEEeecCCCCHHHHHHHhhccCccccHHHHHHHHHH
Confidence                          99999998774321        01245799999999999775533       23788999999999


Q ss_pred             HHHHHHHHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecC-----CcEEEeecCC
Q psy9184         405 VVFSLAVAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVG-----EKICYYDLSQ  479 (562)
Q Consensus       405 Il~aL~yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~-----~g~v~~~l~~  479 (562)
                      ++.||.|||+ .+|+||||||+||+++..+                    .++|+|||+++....     .....+..|+
T Consensus       133 i~~~l~~lH~-~~i~H~dlkp~nili~~~~--------------------~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~  191 (286)
T cd06638         133 ALMGLQHLHV-NKTIHRDVKGNNILLTTEG--------------------GVKLVDFGVSAQLTSTRLRRNTSVGTPFWM  191 (286)
T ss_pred             HHHHHHHHHh-CCccccCCCHHhEEECCCC--------------------CEEEccCCceeecccCCCccccccCCCccc
Confidence            9999999999 7999999999999999886                    699999999987643     2234566789


Q ss_pred             CccccCC------CCCcHHHHHHHhhcccCCCCCCCCCCChhhhHHHHHHHHhhcccCCCCCCCchhHHHHHHHHHHHhc
Q psy9184         480 DEELFEG------EGDYQFDMYRMMRKQCQNNWQNFTPKNNVFWIHYLVDKATCLKKGYQYLRAPRHQAFELLEELGQNA  553 (562)
Q Consensus       480 ~pelF~g------~~~~q~dIy~lm~~~~~~~W~~~~P~tn~~wl~yl~~~Ll~~~~~~~~~~~~~~~~~~~l~~l~~~~  553 (562)
                      +||.+.+      ..+.+.|+|++.-. ....+.+..|+........+.. ... . ..+. .......-..+..|..++
T Consensus       192 aPE~~~~~~~~~~~~~~~~Dv~slGvi-~~el~~g~~p~~~~~~~~~~~~-~~~-~-~~~~-~~~~~~~~~~~~~li~~~  266 (286)
T cd06638         192 APEVIACEQQLDSTYDARCDVWSLGIT-AIELGDGDPPLADLHPMRALFK-IPR-N-PPPT-LHQPELWSNEFNDFIRKC  266 (286)
T ss_pred             ChhhhchhhhccccccchhhhhhHHHH-HHHHhcCCCCCCCCchhHHHhh-ccc-c-CCCc-ccCCCCcCHHHHHHHHHH
Confidence            9998753      23556899876332 2233444444432221111111 111 0 0000 000011124577788888


Q ss_pred             CCCcCcCC
Q psy9184         554 LHFDSCYE  561 (562)
Q Consensus       554 l~~~s~~~  561 (562)
                      |+.+...|
T Consensus       267 l~~~p~~R  274 (286)
T cd06638         267 LTKDYEKR  274 (286)
T ss_pred             ccCCcccC
Confidence            88776554

Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear

>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3

Probab=99.89  E-value=4.2e-23  Score=211.41  Aligned_cols=172  Identities=22%  Similarity=0.335  Sum_probs=141.9

Q ss_pred             CCCCCceeeeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCccc
Q psy9184         259 PSSALKNCKKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFT  332 (562)
Q Consensus       259 ~~~~y~~~~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv  332 (562)
                      +..+|.+.+.||+|+||.||+|      +.||+|.+....        ....+.+.+|+.+++.++|             
T Consensus        17 ~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~--------~~~~~~~~~e~~~l~~~~h-------------   75 (297)
T cd06656          17 PKKKYTRFEKIGQGASGTVYTAIDIATGQEVAIKQMNLQQ--------QPKKELIINEILVMRENKN-------------   75 (297)
T ss_pred             hhhhceeeeeeccCCCeEEEEEEECCCCCEEEEEEEecCc--------cchHHHHHHHHHHHHhCCC-------------
Confidence            3478999999999999999999      889999997643        1223567899999999998             


Q ss_pred             ccccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc--cCCHHHHHHHHHHHHHHHH
Q psy9184         333 ELLKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK--YRSPNQTYAMILQVVFSLA  410 (562)
Q Consensus       333 ~l~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~--~l~e~~i~~I~~QIl~aL~  410 (562)
                                   |||+++++.|..             ++..|+||||++||++.+.+.  .+++.++..++.|++.||.
T Consensus        76 -------------~~i~~~~~~~~~-------------~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~l~~~L~  129 (297)
T cd06656          76 -------------PNIVNYLDSYLV-------------GDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQALD  129 (297)
T ss_pred             -------------CCEeeEEEEEec-------------CCEEEEeecccCCCCHHHHHHhCCCCHHHHHHHHHHHHHHHH
Confidence                         999999998875             558999999999998776654  3789999999999999999


Q ss_pred             HHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecCC-----cEEEeecCCCccccC
Q psy9184         411 VAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVGE-----KICYYDLSQDEELFE  485 (562)
Q Consensus       411 yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~~-----g~v~~~l~~~pelF~  485 (562)
                      |||+ .+|+||||||+|||++.++                    .++|+|||++......     ....+..|.+||.+.
T Consensus       130 ~LH~-~~i~H~dL~p~Nili~~~~--------------------~~~l~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~  188 (297)
T cd06656         130 FLHS-NQVIHRDIKSDNILLGMDG--------------------SVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVT  188 (297)
T ss_pred             HHHH-CCcccCCCCHHHEEECCCC--------------------CEEECcCccceEccCCccCcCcccCCccccCHHHHc
Confidence            9999 7999999999999998876                    7999999999875432     223455678899877


Q ss_pred             CC-CCcHHHHHHHh
Q psy9184         486 GE-GDYQFDMYRMM  498 (562)
Q Consensus       486 g~-~~~q~dIy~lm  498 (562)
                      +. ...+.|+|++.
T Consensus       189 ~~~~~~~~Di~slG  202 (297)
T cd06656         189 RKAYGPKVDIWSLG  202 (297)
T ss_pred             CCCCCcHHHHHHHH
Confidence            64 45668998853

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk

Probab=99.89  E-value=7e-23  Score=204.47  Aligned_cols=225  Identities=20%  Similarity=0.175  Sum_probs=160.0

Q ss_pred             CCCCceeeeeeccCceEEEEE-----eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCccccc
Q psy9184         260 SSALKNCKKIGEGVYGEVFKL-----NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTEL  334 (562)
Q Consensus       260 ~~~y~~~~~LG~GsfG~Vyka-----~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~l  334 (562)
                      .++|++.++||+|+||.||+|     ..+|+|.+.....         ..+.+.+|+.+++.++|               
T Consensus         5 ~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~k~~~~~~~---------~~~~~~~E~~~l~~l~~---------------   60 (260)
T cd05070           5 RESLQLIKKLGNGQFGEVWMGTWNGNTKVAVKTLKPGTM---------SPESFLEEAQIMKKLRH---------------   60 (260)
T ss_pred             hHHhhhhheeccccCceEEEEEecCCceeEEEEecCCCC---------CHHHHHHHHHHHHhcCC---------------
Confidence            467899999999999999999     5799999875431         12467899999999998               


Q ss_pred             ccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc-----cCCHHHHHHHHHHHHHHH
Q psy9184         335 LKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK-----YRSPNQTYAMILQVVFSL  409 (562)
Q Consensus       335 ~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~-----~l~e~~i~~I~~QIl~aL  409 (562)
                                 |+++++++.+.              ....|++|||+.+|++.+.+.     .+++..+..++.|++.||
T Consensus        61 -----------~~i~~~~~~~~--------------~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al  115 (260)
T cd05070          61 -----------DKLVQLYAVVS--------------EEPIYIVTEYMSKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGM  115 (260)
T ss_pred             -----------CceEEEEeEEC--------------CCCcEEEEEecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHH
Confidence                       99999987663              345799999999998876653     378999999999999999


Q ss_pred             HHHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecCCc------EEEeecCCCccc
Q psy9184         410 AVAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVGEK------ICYYDLSQDEEL  483 (562)
Q Consensus       410 ~yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~~g------~v~~~l~~~pel  483 (562)
                      .|||+ .+|+||||||+||+++.++                    .++|+|||+++......      ......|++||.
T Consensus       116 ~~lH~-~~i~H~di~p~Nili~~~~--------------------~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~  174 (260)
T cd05070         116 AYIER-MNYIHRDLRSANILVGDGL--------------------VCKIADFGLARLIEDNEYTARQGAKFPIKWTAPEA  174 (260)
T ss_pred             HHHHH-CCcccCCCccceEEEeCCc--------------------eEEeCCceeeeeccCcccccccCCCCCccccChHH
Confidence            99999 7999999999999998876                    79999999998764422      122235889997


Q ss_pred             cCC-CCCcHHHHHHHhhcccCCCCC-CCCCCChhhhHHHHHHHHhhcccCCCCCCCchhHHHHHHHHHHHhcCCCcCcCC
Q psy9184         484 FEG-EGDYQFDMYRMMRKQCQNNWQ-NFTPKNNVFWIHYLVDKATCLKKGYQYLRAPRHQAFELLEELGQNALHFDSCYE  561 (562)
Q Consensus       484 F~g-~~~~q~dIy~lm~~~~~~~W~-~~~P~tn~~wl~yl~~~Ll~~~~~~~~~~~~~~~~~~~l~~l~~~~l~~~s~~~  561 (562)
                      +.+ ..+...|||+++-... ..+. +..|+.+..-.. +...+.. +..++.+.    ..-..+.+|...++..+...|
T Consensus       175 ~~~~~~~~~~Di~slG~~l~-~l~~~g~~p~~~~~~~~-~~~~~~~-~~~~~~~~----~~~~~~~~li~~~l~~~p~~R  247 (260)
T cd05070         175 ALYGRFTIKSDVWSFGILLT-ELVTKGRVPYPGMNNRE-VLEQVER-GYRMPCPQ----DCPISLHELMLQCWKKDPEER  247 (260)
T ss_pred             HhcCCCcchhhhHHHHHHHH-HHHhcCCCCCCCCCHHH-HHHHHHc-CCCCCCCC----cCCHHHHHHHHHHcccCcccC
Confidence            655 4556689988643332 3333 444543322111 2222332 11221111    113456777788877766554

Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r

>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3

Probab=99.89  E-value=1.1e-22  Score=206.17  Aligned_cols=172  Identities=19%  Similarity=0.212  Sum_probs=136.4

Q ss_pred             CCCCCceeeeeeccCceEEEEE------e----eEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCC
Q psy9184         259 PSSALKNCKKIGEGVYGEVFKL------N----NSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENST  328 (562)
Q Consensus       259 ~~~~y~~~~~LG~GsfG~Vyka------~----~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~  328 (562)
                      ...+|++.+.||+|+||.||+|      .    .+|+|.+....       ......++..|+.+++.+.|         
T Consensus         5 ~~~~~~~~~~lg~G~~~~vy~~~~~~~~~~~~~~~~~k~~~~~~-------~~~~~~~~~~~~~~l~~l~h---------   68 (279)
T cd05111           5 KETELRKLKLLGSGVFGTVHKGIWIPEGDSIKIPVAIKTIQDRS-------GRQTFQEITDHMLAMGSLDH---------   68 (279)
T ss_pred             CHhhceeccccCccCCcceEEEEEcCCCCceeeEEEEeeccccc-------chHHHHHHHHHHHHHhcCCC---------
Confidence            4467899999999999999999      1    47778775321       23445677889999999988         


Q ss_pred             CcccccccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc----cCCHHHHHHHHHH
Q psy9184         329 PCFTELLKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK----YRSPNQTYAMILQ  404 (562)
Q Consensus       329 p~fv~l~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~----~l~e~~i~~I~~Q  404 (562)
                                       |||+++++++.              +...+++|||+.+|++.+.+.    .+++..+..++.|
T Consensus        69 -----------------~~iv~~~~~~~--------------~~~~~~i~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~q  117 (279)
T cd05111          69 -----------------AYIVRLLGICP--------------GASLQLVTQLSPLGSLLDHVRQHRDSLDPQRLLNWCVQ  117 (279)
T ss_pred             -----------------CCcceEEEEEC--------------CCccEEEEEeCCCCcHHHHHHhcccCCCHHHHHHHHHH
Confidence                             99999988763              335789999999998887763    3789999999999


Q ss_pred             HHHHHHHHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecCCc-------EEEeec
Q psy9184         405 VVFSLAVAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVGEK-------ICYYDL  477 (562)
Q Consensus       405 Il~aL~yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~~g-------~v~~~l  477 (562)
                      |+.||.|||+ .+|+||||||+|||++.++                    .+||+|||+++......       ...+..
T Consensus       118 i~~~l~~lH~-~~iiH~dlkp~nili~~~~--------------------~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~  176 (279)
T cd05111         118 IAKGMYYLEE-HRMVHRNLAARNILLKSDS--------------------IVQIADFGVADLLYPDDKKYFYSEHKTPIK  176 (279)
T ss_pred             HHHHHHHHHH-CCEeccccCcceEEEcCCC--------------------cEEEcCCccceeccCCCcccccCCCCCccc
Confidence            9999999999 7999999999999998875                    79999999998764321       112335


Q ss_pred             CCCccccCC-CCCcHHHHHHHh
Q psy9184         478 SQDEELFEG-EGDYQFDMYRMM  498 (562)
Q Consensus       478 ~~~pelF~g-~~~~q~dIy~lm  498 (562)
                      |++||.+.+ ..+...|||+..
T Consensus       177 y~~pE~~~~~~~~~~~Dv~slG  198 (279)
T cd05111         177 WMALESILFGRYTHQSDVWSYG  198 (279)
T ss_pred             ccCHHHhccCCcCchhhHHHHH
Confidence            788988764 456668998753

Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r

>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6

Probab=99.89  E-value=8.4e-23  Score=206.29  Aligned_cols=235  Identities=18%  Similarity=0.229  Sum_probs=163.9

Q ss_pred             CCCCCceeeeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCccc
Q psy9184         259 PSSALKNCKKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFT  332 (562)
Q Consensus       259 ~~~~y~~~~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv  332 (562)
                      +.+.|++.+.||.|+||.||+|      +.+|+|++....         .....+..|+.+++.+.+             
T Consensus        14 ~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~a~K~~~~~~---------~~~~~~~~e~~~l~~~~~-------------   71 (282)
T cd06636          14 PAGIFELVEVVGNGTYGQVYKGRHVKTGQLAAIKVMDVTE---------DEEEEIKLEINMLKKYSH-------------   71 (282)
T ss_pred             hhhhhhhheeeccCCCeEEEEEEEcCCCcEEEEEEEecCh---------HHHHHHHHHHHHHHHhcC-------------
Confidence            4578899999999999999999      789999987542         223567889999999854             


Q ss_pred             ccccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc-----cCCHHHHHHHHHHHHH
Q psy9184         333 ELLKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK-----YRSPNQTYAMILQVVF  407 (562)
Q Consensus       333 ~l~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~-----~l~e~~i~~I~~QIl~  407 (562)
                                  ||||+++++.|....       .....+.+|++|||+.+|++.+.+.     .+++..+..++.||+.
T Consensus        72 ------------h~~i~~~~~~~~~~~-------~~~~~~~~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~  132 (282)
T cd06636          72 ------------HRNIATYYGAFIKKS-------PPGHDDQLWLVMEFCGAGSVTDLVKNTKGNALKEDWIAYICREILR  132 (282)
T ss_pred             ------------CCcEEEEeeehhccc-------ccCCCCEEEEEEEeCCCCcHHHHHHHccCCCCCHHHHHHHHHHHHH
Confidence                        499999999886421       0112458899999999987766553     2778889999999999


Q ss_pred             HHHHHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecC-----CcEEEeecCCCcc
Q psy9184         408 SLAVAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVG-----EKICYYDLSQDEE  482 (562)
Q Consensus       408 aL~yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~-----~g~v~~~l~~~pe  482 (562)
                      ||.|||+ .+|+||||||+||+++.++                    .++|+|||+++....     .....+..|++||
T Consensus       133 al~~LH~-~~ivH~dl~~~nili~~~~--------------------~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE  191 (282)
T cd06636         133 GLAHLHA-HKVIHRDIKGQNVLLTENA--------------------EVKLVDFGVSAQLDRTVGRRNTFIGTPYWMAPE  191 (282)
T ss_pred             HHHHHHH-CCcccCCCCHHHEEECCCC--------------------CEEEeeCcchhhhhccccCCCcccccccccCHh
Confidence            9999999 7999999999999999876                    699999999876532     2344566788999


Q ss_pred             ccCC------CCCcHHHHHHHhhcccCCCCCCCCCCChhhhHHHHHHHHhhcccCCCCCCCchhHHHHHHHHHHHhcCCC
Q psy9184         483 LFEG------EGDYQFDMYRMMRKQCQNNWQNFTPKNNVFWIHYLVDKATCLKKGYQYLRAPRHQAFELLEELGQNALHF  556 (562)
Q Consensus       483 lF~g------~~~~q~dIy~lm~~~~~~~W~~~~P~tn~~wl~yl~~~Ll~~~~~~~~~~~~~~~~~~~l~~l~~~~l~~  556 (562)
                      .+..      ..+.+.|+|++. ......+.+..|+....-..-+. .... ..   .........-..+.+|.+.+|+.
T Consensus       192 ~l~~~~~~~~~~~~~~DvwslG-~~l~el~~g~~p~~~~~~~~~~~-~~~~-~~---~~~~~~~~~~~~~~~li~~cl~~  265 (282)
T cd06636         192 VIACDENPDATYDYRSDIWSLG-ITAIEMAEGAPPLCDMHPMRALF-LIPR-NP---PPKLKSKKWSKKFIDFIEGCLVK  265 (282)
T ss_pred             hcCcccCcCcCCCcccchhHHH-HHHHHHHhCCCCccccCHHhhhh-hHhh-CC---CCCCcccccCHHHHHHHHHHhCC
Confidence            8652      344568998863 33323344444543221111111 1111 01   11111112245778888999988


Q ss_pred             cCcCC
Q psy9184         557 DSCYE  561 (562)
Q Consensus       557 ~s~~~  561 (562)
                      +...|
T Consensus       266 ~p~~R  270 (282)
T cd06636         266 NYLSR  270 (282)
T ss_pred             ChhhC
Confidence            77655

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea

>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4

Probab=99.89  E-value=6.2e-23  Score=211.61  Aligned_cols=174  Identities=21%  Similarity=0.267  Sum_probs=137.3

Q ss_pred             CCCCCceeeeeeccCceEEEEE-------------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCC
Q psy9184         259 PSSALKNCKKIGEGVYGEVFKL-------------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTE  325 (562)
Q Consensus       259 ~~~~y~~~~~LG~GsfG~Vyka-------------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~  325 (562)
                      +.++|.+.++||+|+||.||+|             ..+|+|++....       .......+.+|+.+++.+..      
T Consensus        10 ~~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~~~~~aiK~~~~~~-------~~~~~~~~~~E~~~l~~l~~------   76 (314)
T cd05099          10 PRDRLVLGKPLGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNA-------TDKDLADLISEMELMKLIGK------   76 (314)
T ss_pred             cHHHeeeeeeecCCCcccEEEeeecccCCccCCcceEEEEEecCCCC-------ChHHHHHHHHHHHHHHhccC------
Confidence            4467899999999999999998             258999887542       23345678899999999953      


Q ss_pred             CCCCcccccccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc--------------
Q psy9184         326 NSTPCFTELLKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK--------------  391 (562)
Q Consensus       326 n~~p~fv~l~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~--------------  391 (562)
                                         ||||+++++++..             ++.+|++|||+.+|++.+.+.              
T Consensus        77 -------------------h~~iv~~~~~~~~-------------~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~  124 (314)
T cd05099          77 -------------------HKNIINLLGVCTQ-------------EGPLYVIVEYAAKGNLREFLRARRPPGPDYTFDIT  124 (314)
T ss_pred             -------------------CCCeeeEEEEEcc-------------CCceEEEEecCCCCcHHHHHHhcCCCccccccccc
Confidence                               3999999998864             457899999999997765542              


Q ss_pred             -----cCCHHHHHHHHHHHHHHHHHHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceee
Q psy9184         392 -----YRSPNQTYAMILQVVFSLAVAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRC  466 (562)
Q Consensus       392 -----~l~e~~i~~I~~QIl~aL~yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~  466 (562)
                           .+++.++..++.||+.||.|||+ .||+||||||+|||++.++                    .+||+|||+++.
T Consensus       125 ~~~~~~l~~~~~~~~~~qi~~aL~~lH~-~gi~H~dlkp~Nill~~~~--------------------~~kL~Dfg~~~~  183 (314)
T cd05099         125 KVPEEQLSFKDLVSCAYQVARGMEYLES-RRCIHRDLAARNVLVTEDN--------------------VMKIADFGLARG  183 (314)
T ss_pred             CCcccccCHHHHHHHHHHHHHHHHHHHH-CCeeeccccceeEEEcCCC--------------------cEEEcccccccc
Confidence                 26788899999999999999999 7999999999999998876                    799999999986


Q ss_pred             ecCCcE-------EEeecCCCccccCC-CCCcHHHHHHHh
Q psy9184         467 FVGEKI-------CYYDLSQDEELFEG-EGDYQFDMYRMM  498 (562)
Q Consensus       467 ~~~~g~-------v~~~l~~~pelF~g-~~~~q~dIy~lm  498 (562)
                      ......       .....|++||.+.+ ..+...|||++.
T Consensus       184 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG  223 (314)
T cd05099         184 VHDIDYYKKTSNGRLPVKWMAPEALFDRVYTHQSDVWSFG  223 (314)
T ss_pred             ccccccccccccCCCCccccCHHHHccCCcCccchhhHHH
Confidence            543110       11235889997665 345568888853

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4

Probab=99.89  E-value=3e-22  Score=198.70  Aligned_cols=228  Identities=19%  Similarity=0.234  Sum_probs=161.5

Q ss_pred             CCceeeeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCcccccc
Q psy9184         262 ALKNCKKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTELL  335 (562)
Q Consensus       262 ~y~~~~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~l~  335 (562)
                      +|++.+.||+|+||.||++      +.||+|.+....      ......+.+.+|+.+++.++|                
T Consensus         1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~------~~~~~~~~~~~e~~~l~~l~~----------------   58 (257)
T cd08223           1 AYCFVRVVGKGSYGEVSLVRHRTDGKQYVIKKLNLRN------ASRRERKAAEQEAQLLSQLKH----------------   58 (257)
T ss_pred             CceEEEEecCCCCeEEEEEEEcCCCcEEEEEEEehhh------cCHHHHHHHHHHHHHHHhCCC----------------
Confidence            4889999999999999999      679999997642      123344667899999999998                


Q ss_pred             cccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc-----cCCHHHHHHHHHHHHHHHH
Q psy9184         336 KCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK-----YRSPNQTYAMILQVVFSLA  410 (562)
Q Consensus       336 ~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~-----~l~e~~i~~I~~QIl~aL~  410 (562)
                                ||++++++.+..            .+..+|++|||+++|++.+.+.     .+++.++..++.|++.||+
T Consensus        59 ----------~~i~~~~~~~~~------------~~~~~~lv~e~~~~~~l~~~l~~~~~~~l~~~~~~~~~~~l~~~l~  116 (257)
T cd08223          59 ----------PNIVAYRESWEG------------EDGLLYIVMGFCEGGDLYHKLKEQKGKLLPENQVVEWFVQIAMALQ  116 (257)
T ss_pred             ----------CCeeeeeeeecC------------CCCEEEEEecccCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHH
Confidence                      999998887653            2446899999999998766553     3789999999999999999


Q ss_pred             HHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecCC-----cEEEeecCCCccccC
Q psy9184         411 VAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVGE-----KICYYDLSQDEELFE  485 (562)
Q Consensus       411 yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~~-----g~v~~~l~~~pelF~  485 (562)
                      +||+ .||+||||||+||+++.++                    .++|+|||++......     ....+..|++||+..
T Consensus       117 ~lH~-~~i~H~di~p~nil~~~~~--------------------~~~l~df~~~~~~~~~~~~~~~~~~~~~y~aPE~~~  175 (257)
T cd08223         117 YLHE-KHILHRDLKTQNVFLTRTN--------------------IIKVGDLGIARVLENQCDMASTLIGTPYYMSPELFS  175 (257)
T ss_pred             HHHh-CCeeccCCCchhEEEecCC--------------------cEEEecccceEEecccCCccccccCCcCccChhHhc
Confidence            9999 7999999999999998876                    7999999999876532     123355688999877


Q ss_pred             CC-CCcHHHHHHHhhcccCCCCCCCCCCChhhhHHHHHHHHhhcccCCCCCCCchhHHHHHHHHHHHhcCCCcCcCC
Q psy9184         486 GE-GDYQFDMYRMMRKQCQNNWQNFTPKNNVFWIHYLVDKATCLKKGYQYLRAPRHQAFELLEELGQNALHFDSCYE  561 (562)
Q Consensus       486 g~-~~~q~dIy~lm~~~~~~~W~~~~P~tn~~wl~yl~~~Ll~~~~~~~~~~~~~~~~~~~l~~l~~~~l~~~s~~~  561 (562)
                      +. .....|+|++.-... ....+..|+.... .......+.. +. ++...   ......+.+|...++..+...|
T Consensus       176 ~~~~~~~~Dv~slG~il~-~l~~g~~~~~~~~-~~~~~~~~~~-~~-~~~~~---~~~~~~~~~li~~~l~~~p~~R  245 (257)
T cd08223         176 NKPYNYKSDVWALGCCVY-EMATLKHAFNAKD-MNSLVYRIIE-GK-LPPMP---KDYSPELGELIATMLSKRPEKR  245 (257)
T ss_pred             CCCCCchhhhHHHHHHHH-HHHcCCCCCCCCC-HHHHHHHHHh-cC-CCCCc---cccCHHHHHHHHHHhccCcccC
Confidence            64 455689988543332 2222333332111 1122222332 11 11111   1223467778888888776554

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.

>KOG0193|consensus

Probab=99.89  E-value=8.8e-24  Score=227.19  Aligned_cols=171  Identities=19%  Similarity=0.291  Sum_probs=141.1

Q ss_pred             CCCCCceeeeeeccCceEEEEE---eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCcccccc
Q psy9184         259 PSSALKNCKKIGEGVYGEVFKL---NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTELL  335 (562)
Q Consensus       259 ~~~~y~~~~~LG~GsfG~Vyka---~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~l~  335 (562)
                      +.+.+.+...||.|.||+||+|   -.||||++....      ..+..++.|.+|+.++++-.|                
T Consensus       390 p~~ev~l~~rIGsGsFGtV~Rg~whGdVAVK~Lnv~~------pt~~qlqaFKnEVa~lkkTRH----------------  447 (678)
T KOG0193|consen  390 PPEEVLLGERIGSGSFGTVYRGRWHGDVAVKLLNVDD------PTPEQLQAFKNEVAVLKKTRH----------------  447 (678)
T ss_pred             CHHHhhccceeccccccceeecccccceEEEEEecCC------CCHHHHHHHHHHHHHHhhcch----------------
Confidence            3466788999999999999999   899999999874      345578999999999999998                


Q ss_pred             cccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc----cCCHHHHHHHHHHHHHHHHH
Q psy9184         336 KCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK----YRSPNQTYAMILQVVFSLAV  411 (562)
Q Consensus       336 ~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~----~l~e~~i~~I~~QIl~aL~y  411 (562)
                                .||+=+.+++..              ..+.||..+|.|-+|+.++.    +|.....+.|++||+.|+.|
T Consensus       448 ----------~NIlLFMG~~~~--------------p~~AIiTqwCeGsSLY~hlHv~etkfdm~~~idIAqQiaqGM~Y  503 (678)
T KOG0193|consen  448 ----------ENILLFMGACMN--------------PPLAIITQWCEGSSLYTHLHVQETKFDMNTTIDIAQQIAQGMDY  503 (678)
T ss_pred             ----------hhheeeehhhcC--------------CceeeeehhccCchhhhhccchhhhhhHHHHHHHHHHHHHhhhh
Confidence                      899988888864              34599999999887777664    38888999999999999999


Q ss_pred             HHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecC-------CcEEEeecCCCcccc
Q psy9184         412 AEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVG-------EKICYYDLSQDEELF  484 (562)
Q Consensus       412 LH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~-------~g~v~~~l~~~pelF  484 (562)
                      ||.+ +|||||||..||++..++                    .|||+||||+....-       ....+.-+|+|||+.
T Consensus       504 LHAK-~IIHrDLKSnNIFl~~~~--------------------kVkIgDFGLatvk~~w~g~~q~~qp~gsilwmAPEvI  562 (678)
T KOG0193|consen  504 LHAK-NIIHRDLKSNNIFLHEDL--------------------KVKIGDFGLATVKTRWSGEQQLEQPHGSLLWMAPEVI  562 (678)
T ss_pred             hhhh-hhhhhhccccceEEccCC--------------------cEEEecccceeeeeeeccccccCCCccchhhhcHHHH
Confidence            9995 999999999999999986                    799999999976542       223456688999986


Q ss_pred             CCC----CCcHHHHHH
Q psy9184         485 EGE----GDYQFDMYR  496 (562)
Q Consensus       485 ~g~----~~~q~dIy~  496 (562)
                      .-.    ...++|+|.
T Consensus       563 Rmqd~nPfS~qSDVYa  578 (678)
T KOG0193|consen  563 RMQDDNPFSFQSDVYA  578 (678)
T ss_pred             hhcccCCCCcccchhh
Confidence            542    233466655

>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1

Probab=99.89  E-value=8.9e-23  Score=203.79  Aligned_cols=233  Identities=13%  Similarity=0.144  Sum_probs=161.9

Q ss_pred             CCceeeeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCcccccc
Q psy9184         262 ALKNCKKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTELL  335 (562)
Q Consensus       262 ~y~~~~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~l~  335 (562)
                      +|+..+.||+|+||.||+|      +.+|+|++.......  ....+..+.+.+|+.+++.++|                
T Consensus         1 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~alk~~~~~~~~~--~~~~~~~~~~~~e~~~l~~l~h----------------   62 (268)
T cd06630           1 EWLKGQQLGTGAFSSCYQARDVKTGTLMAVKQVTYVRNTS--SEQEEVVEALRKEIRLMARLNH----------------   62 (268)
T ss_pred             CccccceecCcCceEEEEEEEcCCCcEEEEEEeecccCCc--hhHHHHHHHHHHHHHHHHHcCC----------------
Confidence            3677899999999999998      789999997543111  1223345788999999999998                


Q ss_pred             cccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc---cCCHHHHHHHHHHHHHHHHHH
Q psy9184         336 KCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK---YRSPNQTYAMILQVVFSLAVA  412 (562)
Q Consensus       336 ~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~---~l~e~~i~~I~~QIl~aL~yL  412 (562)
                                |||+++++.+.+             .+..++||||+.||++.+.+.   .+++..+..++.||+.||.||
T Consensus        63 ----------~~iv~~~~~~~~-------------~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ql~~al~~L  119 (268)
T cd06630          63 ----------PHIIRMLGATCE-------------DSHFNLFVEWMAGGSVSHLLSKYGAFKEAVIINYTEQLLRGLSYL  119 (268)
T ss_pred             ----------Cceehhhceecc-------------CCeEEEEEeccCCCcHHHHHHHhCCCCHHHHHHHHHHHHHHHHHH
Confidence                      999999999875             558999999999987765553   488999999999999999999


Q ss_pred             HhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecCC---------cEEEeecCCCccc
Q psy9184         413 EVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVGE---------KICYYDLSQDEEL  483 (562)
Q Consensus       413 H~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~~---------g~v~~~l~~~pel  483 (562)
                      |+ .|++||||+|+||+++.++.                   .++|+|||+++.....         ....+..|++||+
T Consensus       120 H~-~~i~H~~i~~~nil~~~~~~-------------------~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~PE~  179 (268)
T cd06630         120 HE-NQIIHRDVKGANLLIDSTGQ-------------------RLRIADFGAAARLAAKGTGAGEFQGQLLGTIAFMAPEV  179 (268)
T ss_pred             Hh-CCeecCCCCHHHEEEcCCCC-------------------EEEEcccccccccccccccCCccccccccccceeCHhH
Confidence            99 79999999999999987652                   6999999999776531         1234556788887


Q ss_pred             cCC-CCCcHHHHHHHhhcccCCCCCCCCCCChhhh---HHHHHHHHhhcccCCCCCCCchhHHHHHHHHHHHhcCCCcCc
Q psy9184         484 FEG-EGDYQFDMYRMMRKQCQNNWQNFTPKNNVFW---IHYLVDKATCLKKGYQYLRAPRHQAFELLEELGQNALHFDSC  559 (562)
Q Consensus       484 F~g-~~~~q~dIy~lm~~~~~~~W~~~~P~tn~~w---l~yl~~~Ll~~~~~~~~~~~~~~~~~~~l~~l~~~~l~~~s~  559 (562)
                      +.+ ..+.+.|+|+++.... ..+.+..|+.+..+   ...+......    ...+. ........+.+|...+|.++..
T Consensus       180 ~~~~~~~~~~Dv~slG~~l~-~l~~g~~p~~~~~~~~~~~~~~~~~~~----~~~~~-~~~~~~~~~~~~i~~~l~~~p~  253 (268)
T cd06630         180 LRGEQYGRSCDVWSVGCVII-EMATAKPPWNAEKHSNHLALIFKIASA----TTAPS-IPEHLSPGLRDVTLRCLELQPE  253 (268)
T ss_pred             hccCCCCcccchHHHHHHHH-HHHhCCCCCCCCCCcchHHHHHHHhcc----CCCCC-CchhhCHHHHHHHHHHcCCCcc
Confidence            765 3445578877543332 22233333321111   1111111111    11111 1112245677888899988776


Q ss_pred             CC
Q psy9184         560 YE  561 (562)
Q Consensus       560 ~~  561 (562)
                      .|
T Consensus       254 ~R  255 (268)
T cd06630         254 DR  255 (268)
T ss_pred             cC
Confidence            65

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their

>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases

Probab=99.89  E-value=1.1e-22  Score=204.42  Aligned_cols=228  Identities=16%  Similarity=0.143  Sum_probs=161.2

Q ss_pred             CCCCceeeeeeccCceEEEEE-----------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCC
Q psy9184         260 SSALKNCKKIGEGVYGEVFKL-----------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENST  328 (562)
Q Consensus       260 ~~~y~~~~~LG~GsfG~Vyka-----------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~  328 (562)
                      .++|.+.+.||+|+||.||+|           ..||+|.+....       .......+.+|+.+++.++|         
T Consensus         5 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~-------~~~~~~~~~~e~~~l~~~~~---------   68 (277)
T cd05032           5 REKITLIRELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENA-------SMRERIEFLNEASVMKEFNC---------   68 (277)
T ss_pred             hHHeeEEeEecCCCCceEEEEEEeccCCCCcceeEEEEecCCcc-------CHHHHHHHHHHHHHHHhCCC---------
Confidence            467899999999999999998           369999986432       22334577899999999998         


Q ss_pred             CcccccccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc-------------cCCH
Q psy9184         329 PCFTELLKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK-------------YRSP  395 (562)
Q Consensus       329 p~fv~l~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~-------------~l~e  395 (562)
                                       |||+++++++..             ....|+||||+.+|++.+.+.             .+++
T Consensus        69 -----------------~~i~~~~~~~~~-------------~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~  118 (277)
T cd05032          69 -----------------HHVVRLLGVVST-------------GQPTLVVMELMAKGDLKSYLRSRRPEAENNPGLGPPTL  118 (277)
T ss_pred             -----------------CceeEEEEEEcC-------------CCCcEEEEecCCCCCHHHHHHhcccchhhccCCCCCCH
Confidence                             999999998875             457999999999987765542             2567


Q ss_pred             HHHHHHHHHHHHHHHHHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecCC-----
Q psy9184         396 NQTYAMILQVVFSLAVAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVGE-----  470 (562)
Q Consensus       396 ~~i~~I~~QIl~aL~yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~~-----  470 (562)
                      ..+..++.||+.||.|||+ .+|+||||||+|||++.++                    .++|+|||+++.....     
T Consensus       119 ~~~~~~~~~i~~~l~~lH~-~~i~H~di~p~nill~~~~--------------------~~kl~dfg~~~~~~~~~~~~~  177 (277)
T cd05032         119 QKFIQMAAEIADGMAYLAA-KKFVHRDLAARNCMVAEDL--------------------TVKIGDFGMTRDIYETDYYRK  177 (277)
T ss_pred             HHHHHHHHHHHHHHHHHHh-CCccccccChheEEEcCCC--------------------CEEECCcccchhhccCccccc
Confidence            8899999999999999999 7999999999999999886                    7999999999865431     


Q ss_pred             --cEEEeecCCCccccCC-CCCcHHHHHHHhhcccCCCCC-CCCCCChhhhHHHHHHHHhhcccCCCCCCCchhHHHHHH
Q psy9184         471 --KICYYDLSQDEELFEG-EGDYQFDMYRMMRKQCQNNWQ-NFTPKNNVFWIHYLVDKATCLKKGYQYLRAPRHQAFELL  546 (562)
Q Consensus       471 --g~v~~~l~~~pelF~g-~~~~q~dIy~lm~~~~~~~W~-~~~P~tn~~wl~yl~~~Ll~~~~~~~~~~~~~~~~~~~l  546 (562)
                        ....+..|.+||.+.+ ....+.|||++.-... ..+. +..|+.....-.. ...+.. ...+..+..    ....+
T Consensus       178 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~-el~t~g~~p~~~~~~~~~-~~~~~~-~~~~~~~~~----~~~~~  250 (277)
T cd05032         178 GGKGLLPVRWMAPESLKDGVFTTKSDVWSFGVVLW-EMATLAEQPYQGLSNEEV-LKFVID-GGHLDLPEN----CPDKL  250 (277)
T ss_pred             CCCCCccccccCHHHHhcCCCCcccchHHHHHHHH-HhhccCCCCCccCCHHHH-HHHHhc-CCCCCCCCC----CCHHH
Confidence              1122456889997754 4556689988654433 2222 3334422211111 122222 222211111    13467


Q ss_pred             HHHHHhcCCCcCcCC
Q psy9184         547 EELGQNALHFDSCYE  561 (562)
Q Consensus       547 ~~l~~~~l~~~s~~~  561 (562)
                      .+|...+++++...|
T Consensus       251 ~~li~~~l~~~p~~R  265 (277)
T cd05032         251 LELMRMCWQYNPKMR  265 (277)
T ss_pred             HHHHHHHcCCChhhC
Confidence            778888888877655

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological

>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor

Probab=99.89  E-value=1.3e-22  Score=206.19  Aligned_cols=173  Identities=18%  Similarity=0.217  Sum_probs=136.8

Q ss_pred             CCCCCceeeeeeccCceEEEEE-----------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCC
Q psy9184         259 PSSALKNCKKIGEGVYGEVFKL-----------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENS  327 (562)
Q Consensus       259 ~~~~y~~~~~LG~GsfG~Vyka-----------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~  327 (562)
                      ..++|++.++||+|+||.||+|           ..||+|.+....       .......+.+|+.+++.++|        
T Consensus         4 ~~~~~~i~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~-------~~~~~~~~~~e~~~l~~l~~--------   68 (288)
T cd05061           4 SREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESA-------SLRERIEFLNEASVMKGFTC--------   68 (288)
T ss_pred             cHHHceeeeeecCCCCcEEEEEEEeccCCCCcceEEEEEECCCcC-------CHHHHHHHHHHHHHHHhCCC--------
Confidence            3467999999999999999998           269999876432       12233467889999999998        


Q ss_pred             CCcccccccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCcccccc-------------CC
Q psy9184         328 TPCFTELLKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIKY-------------RS  394 (562)
Q Consensus       328 ~p~fv~l~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~~-------------l~  394 (562)
                                        |||+++++.+..             .+..|+||||+.+|++.+.+..             ++
T Consensus        69 ------------------~~i~~~~~~~~~-------------~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~  117 (288)
T cd05061          69 ------------------HHVVRLLGVVSK-------------GQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPT  117 (288)
T ss_pred             ------------------CCeeeEEEEEcC-------------CCCcEEEEeCCCCCCHHHHHHHhccccccCCCCCCCC
Confidence                              999999988764             4578999999999988776632             34


Q ss_pred             HHHHHHHHHHHHHHHHHHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecCC----
Q psy9184         395 PNQTYAMILQVVFSLAVAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVGE----  470 (562)
Q Consensus       395 e~~i~~I~~QIl~aL~yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~~----  470 (562)
                      ...+..++.||+.||.|||+ .+|+||||||+|||++.++                    .++|+|||+++.....    
T Consensus       118 ~~~~~~~~~~l~~~l~~lH~-~~i~H~dikp~nili~~~~--------------------~~~L~Dfg~~~~~~~~~~~~  176 (288)
T cd05061         118 LQEMIQMAAEIADGMAYLNA-KKFVHRDLAARNCMVAHDF--------------------TVKIGDFGMTRDIYETDYYR  176 (288)
T ss_pred             HHHHHHHHHHHHHHHHHHHh-CCCcCCCCChheEEEcCCC--------------------cEEECcCCcccccccccccc
Confidence            56788999999999999999 7999999999999999876                    7999999999865331    


Q ss_pred             --c-EEEeecCCCccccCC-CCCcHHHHHHHh
Q psy9184         471 --K-ICYYDLSQDEELFEG-EGDYQFDMYRMM  498 (562)
Q Consensus       471 --g-~v~~~l~~~pelF~g-~~~~q~dIy~lm  498 (562)
                        + ......|++||.+.+ ..+...|+|++.
T Consensus       177 ~~~~~~~~~~y~~pE~~~~~~~~~~~DvwslG  208 (288)
T cd05061         177 KGGKGLLPVRWMAPESLKDGVFTTSSDMWSFG  208 (288)
T ss_pred             ccCCCcccccccCHHHhccCCCChHhHHHHHH
Confidence              1 122345788987765 445668888754

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta

>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2

Probab=99.89  E-value=1.5e-22  Score=207.34  Aligned_cols=173  Identities=19%  Similarity=0.257  Sum_probs=137.2

Q ss_pred             CCCCceeeeeeccCceEEEEE-------------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCC
Q psy9184         260 SSALKNCKKIGEGVYGEVFKL-------------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTEN  326 (562)
Q Consensus       260 ~~~y~~~~~LG~GsfG~Vyka-------------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n  326 (562)
                      ..+|.+.+.||+|+||.||+|             ..+|+|.+....       .......+.+|+.+++.+.+       
T Consensus        14 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~~~v~iK~~~~~~-------~~~~~~~~~~E~~~l~~l~~-------   79 (304)
T cd05101          14 RDKLTLGKPLGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDDA-------TEKDLSDLVSEMEMMKMIGK-------   79 (304)
T ss_pred             HHHeeecceeeccCCceEEEEEEeccCCCCCCcceeEEeeeccccc-------chHHHHHHHHHHHHHHhhcc-------
Confidence            467899999999999999988             268999887432       23345678899999999943       


Q ss_pred             CCCcccccccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc---------------
Q psy9184         327 STPCFTELLKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK---------------  391 (562)
Q Consensus       327 ~~p~fv~l~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~---------------  391 (562)
                                        ||||+++++.+..             .+..|++|||+.+|++.+.+.               
T Consensus        80 ------------------h~~i~~~~~~~~~-------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~  128 (304)
T cd05101          80 ------------------HKNIINLLGACTQ-------------DGPLYVIVEYASKGNLREYLRARRPPGMEYSYDIAR  128 (304)
T ss_pred             ------------------CCCchheeEEEec-------------CCceEEEEecCCCCcHHHHHHhcCCccccccccccc
Confidence                              3999999998865             457899999999997765442               


Q ss_pred             ----cCCHHHHHHHHHHHHHHHHHHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeee
Q psy9184         392 ----YRSPNQTYAMILQVVFSLAVAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCF  467 (562)
Q Consensus       392 ----~l~e~~i~~I~~QIl~aL~yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~  467 (562)
                          .+++..+..++.||+.||.|||+ .||+||||||+|||++.++                    .++|+|||+++..
T Consensus       129 ~~~~~~~~~~~~~~~~qi~~al~~LH~-~givH~dlkp~Nili~~~~--------------------~~kl~D~g~~~~~  187 (304)
T cd05101         129 VPDEQMTFKDLVSCTYQVARGMEYLAS-QKCIHRDLAARNVLVTENN--------------------VMKIADFGLARDV  187 (304)
T ss_pred             CCcccccHHHHHHHHHHHHHHHHHHHH-CCeeecccccceEEEcCCC--------------------cEEECCCccceec
Confidence                26678899999999999999999 7999999999999998776                    7999999999876


Q ss_pred             cCCcE-------EEeecCCCccccCC-CCCcHHHHHHHh
Q psy9184         468 VGEKI-------CYYDLSQDEELFEG-EGDYQFDMYRMM  498 (562)
Q Consensus       468 ~~~g~-------v~~~l~~~pelF~g-~~~~q~dIy~lm  498 (562)
                      .....       ..+..|++||.+.+ ..+.+.|||++.
T Consensus       188 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG  226 (304)
T cd05101         188 NNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFG  226 (304)
T ss_pred             ccccccccccCCCCCceeeCchhhccCCCCchhhHHHHH
Confidence            43211       12345789997765 456668998853

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein

Probab=99.89  E-value=1.8e-22  Score=205.28  Aligned_cols=170  Identities=21%  Similarity=0.282  Sum_probs=135.1

Q ss_pred             CCceeeeeeccCceEEEEE-----------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCc
Q psy9184         262 ALKNCKKIGEGVYGEVFKL-----------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPC  330 (562)
Q Consensus       262 ~y~~~~~LG~GsfG~Vyka-----------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~  330 (562)
                      +|++.+.||+|+||.||+|           ..+|+|.+....       .......+.+|+.+++.++|           
T Consensus         1 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~-------~~~~~~~~~~E~~~l~~l~h-----------   62 (290)
T cd05045           1 NLVLGKTLGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENA-------SSSELRDLLSEFNLLKQVNH-----------   62 (290)
T ss_pred             CccccccccCcCCcceEEEEEecCCCCCcceeEEEEecCCCC-------CHHHHHHHHHHHHHHhhCCC-----------
Confidence            4788899999999999998           358888887542       23345678899999999998           


Q ss_pred             ccccccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc-------------------
Q psy9184         331 FTELLKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK-------------------  391 (562)
Q Consensus       331 fv~l~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~-------------------  391 (562)
                                     |||+++++.+..             ++..|++|||+.+|++.+.+.                   
T Consensus        63 ---------------~~iv~~~~~~~~-------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~  114 (290)
T cd05045          63 ---------------PHVIKLYGACSQ-------------DGPLLLIVEYAKYGSLRSFLRESRKVGPSYLGSDGNRNSS  114 (290)
T ss_pred             ---------------CCEeeEEEEEec-------------CCCcEEEEEecCCCCHHHHHHhcCCccccccccccccccc
Confidence                           999999988764             457899999999987755431                   


Q ss_pred             --------cCCHHHHHHHHHHHHHHHHHHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccc
Q psy9184         392 --------YRSPNQTYAMILQVVFSLAVAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTI  463 (562)
Q Consensus       392 --------~l~e~~i~~I~~QIl~aL~yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGL  463 (562)
                              .+++..++.++.|++.||.|||+ .+|+||||||+|||++.++                    .++|+|||+
T Consensus       115 ~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~-~~ivH~dikp~nill~~~~--------------------~~kl~dfg~  173 (290)
T cd05045         115 YLDNPDERALTMGDLISFAWQISRGMQYLAE-MKLVHRDLAARNVLVAEGR--------------------KMKISDFGL  173 (290)
T ss_pred             cccCccccccCHHHHHHHHHHHHHHHHHHHH-CCeehhhhhhheEEEcCCC--------------------cEEeccccc
Confidence                    26788999999999999999999 7999999999999998775                    799999999


Q ss_pred             eeeecCC-------cEEEeecCCCccccCC-CCCcHHHHHHHh
Q psy9184         464 SRCFVGE-------KICYYDLSQDEELFEG-EGDYQFDMYRMM  498 (562)
Q Consensus       464 Sr~~~~~-------g~v~~~l~~~pelF~g-~~~~q~dIy~lm  498 (562)
                      ++.....       .......|++||.+.+ ..+...|||++.
T Consensus       174 ~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG  216 (290)
T cd05045         174 SRDVYEEDSYVKRSKGRIPVKWMAIESLFDHIYTTQSDVWSFG  216 (290)
T ss_pred             cccccCccchhcccCCCCCccccCHHHHccCCcchHhHHHHHH
Confidence            9865331       1122345788887655 355668998864

Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi

>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa

Probab=99.89  E-value=1.2e-22  Score=203.49  Aligned_cols=219  Identities=16%  Similarity=0.174  Sum_probs=152.5

Q ss_pred             eeeccCceEEEEE--------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCcccccccccc
Q psy9184         268 KIGEGVYGEVFKL--------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTELLKCSC  339 (562)
Q Consensus       268 ~LG~GsfG~Vyka--------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~l~~~~i  339 (562)
                      .||+|+||.||+|        ..||+|++....       .....+.+.+|+.+++.++|                    
T Consensus         2 ~ig~G~~g~v~~~~~~~~~~~~~vavk~~~~~~-------~~~~~~~~~~E~~~l~~l~h--------------------   54 (257)
T cd05115           2 ELGSGNFGCVKKGVYKMRKKQIDVAIKVLKNEN-------EKSVRDEMMREAEIMHQLDN--------------------   54 (257)
T ss_pred             ccCCCCcccEEEEEEecCCCceeEEEEEccccc-------ChHHHHHHHHHHHHHHhcCC--------------------
Confidence            4899999999988        359999987542       23344678899999999998                    


Q ss_pred             cCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc----cCCHHHHHHHHHHHHHHHHHHHhh
Q psy9184         340 VRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK----YRSPNQTYAMILQVVFSLAVAEVE  415 (562)
Q Consensus       340 v~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~----~l~e~~i~~I~~QIl~aL~yLH~~  415 (562)
                            |||+++++.+.              ....|+||||+++|++.+.+.    .+++..+..++.||+.||.|||+ 
T Consensus        55 ------~~ii~~~~~~~--------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~-  113 (257)
T cd05115          55 ------PYIVRMIGVCE--------------AEALMLVMEMASGGPLNKFLSGKKDEITVSNVVELMHQVSMGMKYLEG-  113 (257)
T ss_pred             ------CCeEEEEEEEc--------------CCCeEEEEEeCCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHh-
Confidence                  99999998764              236899999999998766553    38899999999999999999999 


Q ss_pred             CCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecCCcEE--------EeecCCCccccCC-
Q psy9184         416 LEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVGEKIC--------YYDLSQDEELFEG-  486 (562)
Q Consensus       416 ~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~~g~v--------~~~l~~~pelF~g-  486 (562)
                      .|++||||||+|||++.++                    .++|+|||+++........        ....|++||.+.+ 
T Consensus       114 ~~i~H~dlkp~nil~~~~~--------------------~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~  173 (257)
T cd05115         114 KNFVHRDLAARNVLLVNQH--------------------YAKISDFGLSKALGADDSYYKARSAGKWPLKWYAPECINFR  173 (257)
T ss_pred             cCeeecccchheEEEcCCC--------------------cEEeccCCccccccCCccceeccCCCCCCcccCCHHHHccC
Confidence            7999999999999998876                    7999999999865432111        1235788987765 


Q ss_pred             CCCcHHHHHHHhhcccCCCCC-CCCCCChhhhHHHHHHHHhhcccCCCCCCCchhHHHHHHHHHHHhcCCCcCcCC
Q psy9184         487 EGDYQFDMYRMMRKQCQNNWQ-NFTPKNNVFWIHYLVDKATCLKKGYQYLRAPRHQAFELLEELGQNALHFDSCYE  561 (562)
Q Consensus       487 ~~~~q~dIy~lm~~~~~~~W~-~~~P~tn~~wl~yl~~~Ll~~~~~~~~~~~~~~~~~~~l~~l~~~~l~~~s~~~  561 (562)
                      ..+...|||++.-. ....+. +..|+.+.. ..-+...+.. +.....+.    .....+.++...++.++...|
T Consensus       174 ~~~~~~Di~slG~~-l~el~~~g~~p~~~~~-~~~~~~~~~~-~~~~~~~~----~~~~~l~~li~~c~~~~~~~R  242 (257)
T cd05115         174 KFSSRSDVWSYGIT-MWEAFSYGQKPYKKMK-GPEVMSFIEQ-GKRLDCPA----ECPPEMYALMKDCWIYKWEDR  242 (257)
T ss_pred             CCCchhhHHHHHHH-HHHHhcCCCCCcCcCC-HHHHHHHHHC-CCCCCCCC----CCCHHHHHHHHHHcCCChhhC
Confidence            44556899885332 222232 444553321 1112222222 22222111    113466677788887766554

Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho

>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases

Probab=99.89  E-value=8.6e-23  Score=207.17  Aligned_cols=183  Identities=17%  Similarity=0.203  Sum_probs=142.2

Q ss_pred             CCCceeeeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCccccc
Q psy9184         261 SALKNCKKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTEL  334 (562)
Q Consensus       261 ~~y~~~~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~l  334 (562)
                      ++|+..+.||+|+||.||+|      +.||+|.+.....       ......+.+|+.+++.++|               
T Consensus         5 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~-------~~~~~~~~~E~~~l~~l~h---------------   62 (291)
T cd07844           5 ETYKKLDKLGEGSYATVYKGRSKLTGQLVALKEIRLEHE-------EGAPFTAIREASLLKDLKH---------------   62 (291)
T ss_pred             cceeEEEEEeecCCeEEEEEEEcCCCcEEEEEEEecccc-------cCCchhHHHHHHHHhhCCC---------------
Confidence            67899999999999999999      7899999876431       1111345789999999998               


Q ss_pred             ccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc----cCCHHHHHHHHHHHHHHHH
Q psy9184         335 LKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK----YRSPNQTYAMILQVVFSLA  410 (562)
Q Consensus       335 ~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~----~l~e~~i~~I~~QIl~aL~  410 (562)
                                 |||+++++++.+             ++..|+||||+. +++.+.+.    .+++..++.++.||+.||.
T Consensus        63 -----------~~i~~~~~~~~~-------------~~~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~~~ql~~al~  117 (291)
T cd07844          63 -----------ANIVTLHDIIHT-------------KKTLTLVFEYLD-TDLKQYMDDCGGGLSMHNVRLFLFQLLRGLA  117 (291)
T ss_pred             -----------cceeeEEEEEec-------------CCeEEEEEecCC-CCHHHHHHhCCCCCCHHHHHHHHHHHHHHHH
Confidence                       999999998875             558999999997 45554432    3789999999999999999


Q ss_pred             HHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecC-----CcEEEeecCCCccccC
Q psy9184         411 VAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVG-----EKICYYDLSQDEELFE  485 (562)
Q Consensus       411 yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~-----~g~v~~~l~~~pelF~  485 (562)
                      |||+ .+|+||||||+|||++.++                    .++|+|||+++....     .....+..|.+||++.
T Consensus       118 ~lH~-~~i~H~dl~p~nil~~~~~--------------------~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~aPE~~~  176 (291)
T cd07844         118 YCHQ-RRVLHRDLKPQNLLISERG--------------------ELKLADFGLARAKSVPSKTYSNEVVTLWYRPPDVLL  176 (291)
T ss_pred             HHHh-CCeecccCCHHHEEEcCCC--------------------CEEECccccccccCCCCccccccccccccCCcHHhh
Confidence            9999 7999999999999999886                    799999999976532     1123466788999887


Q ss_pred             CC--CCcHHHHHHHhhcccCCCCCCCCCC
Q psy9184         486 GE--GDYQFDMYRMMRKQCQNNWQNFTPK  512 (562)
Q Consensus       486 g~--~~~q~dIy~lm~~~~~~~W~~~~P~  512 (562)
                      +.  ...+.|+|++. ......+.+..|+
T Consensus       177 ~~~~~~~~~Dv~slG-~il~~l~~g~~~~  204 (291)
T cd07844         177 GSTEYSTSLDMWGVG-CIFYEMATGRPLF  204 (291)
T ss_pred             cCcccCcHHHHHHHH-HHHHHHHhCCCCC
Confidence            63  34568998863 3332334444444

Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the

>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases

Probab=99.89  E-value=8.5e-23  Score=203.65  Aligned_cols=169  Identities=23%  Similarity=0.261  Sum_probs=136.8

Q ss_pred             CCCceeeeeeccCceEEEEE-----eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCcccccc
Q psy9184         261 SALKNCKKIGEGVYGEVFKL-----NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTELL  335 (562)
Q Consensus       261 ~~y~~~~~LG~GsfG~Vyka-----~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~l~  335 (562)
                      .+|++.+.||+|+||.||+|     ..+|+|++....         .....+.+|+.+++.++|                
T Consensus         4 ~~~~~~~~lg~G~~~~v~~~~~~~~~~~~iK~~~~~~---------~~~~~~~~e~~~l~~l~~----------------   58 (256)
T cd05059           4 SELTFLKELGSGQFGVVHLGKWRGKIDVAIKMIREGA---------MSEDDFIEEAKVMMKLSH----------------   58 (256)
T ss_pred             HHcchhhhhccCCCceEEEeEecCCccEEEEEeccCC---------CCHHHHHHHHHHHHhCCC----------------
Confidence            45788999999999999999     589999986432         112457789999999998                


Q ss_pred             cccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc----cCCHHHHHHHHHHHHHHHHH
Q psy9184         336 KCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK----YRSPNQTYAMILQVVFSLAV  411 (562)
Q Consensus       336 ~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~----~l~e~~i~~I~~QIl~aL~y  411 (562)
                                |||+++++++..             .+..|+||||++||++.+.+.    .+++..+..++.||+.||+|
T Consensus        59 ----------~~i~~~~~~~~~-------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~  115 (256)
T cd05059          59 ----------PNLVQLYGVCTK-------------QRPIFIVTEYMANGCLLNYLRERKGKLGTEWLLDMCSDVCEAMEY  115 (256)
T ss_pred             ----------CCEEEEEEEEcC-------------CCceEEEEecCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHH
Confidence                      999999988764             457899999999998877653    37899999999999999999


Q ss_pred             HHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecCCc------EEEeecCCCccccC
Q psy9184         412 AEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVGEK------ICYYDLSQDEELFE  485 (562)
Q Consensus       412 LH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~~g------~v~~~l~~~pelF~  485 (562)
                      ||+ .||+||||||+||+++.++                    .+||+|||+++......      ..+...|++||.+.
T Consensus       116 lH~-~~i~H~dl~p~ni~i~~~~--------------------~~kl~dfg~~~~~~~~~~~~~~~~~~~~~y~~Pe~~~  174 (256)
T cd05059         116 LES-NGFIHRDLAARNCLVGEDN--------------------VVKVSDFGLARYVLDDQYTSSQGTKFPVKWAPPEVFD  174 (256)
T ss_pred             HHH-CCcccccccHhhEEECCCC--------------------cEEECCcccceecccccccccCCCCCCccccCHHHhc
Confidence            999 7999999999999999886                    79999999998764321      11122478899887


Q ss_pred             C-CCCcHHHHHHHh
Q psy9184         486 G-EGDYQFDMYRMM  498 (562)
Q Consensus       486 g-~~~~q~dIy~lm  498 (562)
                      + ..+...|+|++.
T Consensus       175 ~~~~~~~~Di~slG  188 (256)
T cd05059         175 YSRFSSKSDVWSFG  188 (256)
T ss_pred             cCCCCchhhHHHHH
Confidence            6 445568998753

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows

>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk

Probab=99.89  E-value=3.4e-23  Score=206.26  Aligned_cols=171  Identities=22%  Similarity=0.230  Sum_probs=139.6

Q ss_pred             CCCCceeeeeeccCceEEEEE-----eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCccccc
Q psy9184         260 SSALKNCKKIGEGVYGEVFKL-----NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTEL  334 (562)
Q Consensus       260 ~~~y~~~~~LG~GsfG~Vyka-----~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~l  334 (562)
                      ..+|++.++||.|+||.||+|     ..+|+|++....        ......+..|+.+++.++|               
T Consensus         5 ~~~y~~~~~ig~g~~~~vy~~~~~~~~~~~~k~~~~~~--------~~~~~~~~~e~~~l~~l~~---------------   61 (261)
T cd05148           5 REEFTLERKLGSGYFGEVWEGLWKNRVRVAIKILKSDD--------LLKQQDFQKEVQALKRLRH---------------   61 (261)
T ss_pred             HHHHHHhhhhccCCCccEEEeEecCCCcEEEEeccccc--------hhhHHHHHHHHHHHhcCCC---------------
Confidence            356899999999999999999     789999987543        2334578899999999998               


Q ss_pred             ccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc-----cCCHHHHHHHHHHHHHHH
Q psy9184         335 LKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK-----YRSPNQTYAMILQVVFSL  409 (562)
Q Consensus       335 ~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~-----~l~e~~i~~I~~QIl~aL  409 (562)
                                 |||+++++++..             ....|+||||+++|++.+.+.     .+++.++..++.||+.||
T Consensus        62 -----------~~i~~~~~~~~~-------------~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~al  117 (261)
T cd05148          62 -----------KHLISLFAVCSV-------------GEPVYIITELMEKGSLLAFLRSPEGQVLPVASLIDMACQVAEGM  117 (261)
T ss_pred             -----------cchhheeeeEec-------------CCCeEEEEeecccCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHH
Confidence                       999999888765             457899999999998877664     378999999999999999


Q ss_pred             HHHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecCCcE-----EEeecCCCcccc
Q psy9184         410 AVAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVGEKI-----CYYDLSQDEELF  484 (562)
Q Consensus       410 ~yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~~g~-----v~~~l~~~pelF  484 (562)
                      .|||+ .||+||||||+||+++.++                    .++|+|||++........     .....|++||.+
T Consensus       118 ~~lH~-~~i~h~dl~~~nilv~~~~--------------------~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~~PE~~  176 (261)
T cd05148         118 AYLEE-QNSIHRDLAARNILVGEDL--------------------VCKVADFGLARLIKEDVYLSSDKKIPYKWTAPEAA  176 (261)
T ss_pred             HHHHH-CCeeccccCcceEEEcCCc--------------------eEEEccccchhhcCCccccccCCCCceEecCHHHH
Confidence            99999 7999999999999999886                    799999999987643211     123347788877


Q ss_pred             CC-CCCcHHHHHHHh
Q psy9184         485 EG-EGDYQFDMYRMM  498 (562)
Q Consensus       485 ~g-~~~~q~dIy~lm  498 (562)
                      .+ ....+.|||++.
T Consensus       177 ~~~~~~~~~DiwslG  191 (261)
T cd05148         177 SHGTFSTKSDVWSFG  191 (261)
T ss_pred             ccCCCCchhhHHHHH
Confidence            65 345568998864

Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom

>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=99.89  E-value=1.3e-22  Score=203.15  Aligned_cols=230  Identities=19%  Similarity=0.219  Sum_probs=162.7

Q ss_pred             CCCceeeeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCccccc
Q psy9184         261 SALKNCKKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTEL  334 (562)
Q Consensus       261 ~~y~~~~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~l  334 (562)
                      .+|.+.+.||+|+||.||+|      ..||+|++......   .........+.+|+.+++.++|               
T Consensus         2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~---~~~~~~~~~~~~ei~~l~~l~h---------------   63 (264)
T cd06653           2 VNWRLGKLLGRGAFGEVYLCYDADTGRELAVKQVPFDPDS---QETSKEVNALECEIQLLKNLRH---------------   63 (264)
T ss_pred             CceeeeeeEccCCCeEEEEEEEcCCCCEEEEEEEecCccc---chhhHHHHHHHHHHHHHHHcCC---------------
Confidence            46889999999999999999      78999998653211   1123445678899999999998               


Q ss_pred             ccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc---cCCHHHHHHHHHHHHHHHHH
Q psy9184         335 LKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK---YRSPNQTYAMILQVVFSLAV  411 (562)
Q Consensus       335 ~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~---~l~e~~i~~I~~QIl~aL~y  411 (562)
                                 |||+++++.+.+..           ...++++|||++++++.+.+.   .+++..+..++.||+.||.|
T Consensus        64 -----------~~i~~~~~~~~~~~-----------~~~~~~v~e~~~~~~L~~~~~~~~~l~~~~~~~~~~~i~~al~~  121 (264)
T cd06653          64 -----------DRIVQYYGCLRDPE-----------EKKLSIFVEYMPGGSIKDQLKAYGALTENVTRRYTRQILQGVSY  121 (264)
T ss_pred             -----------CCcceEEEEEEcCC-----------CCEEEEEEEeCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHH
Confidence                       99999998875421           357899999999998766653   37899999999999999999


Q ss_pred             HHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecC--------CcEEEeecCCCccc
Q psy9184         412 AEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVG--------EKICYYDLSQDEEL  483 (562)
Q Consensus       412 LH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~--------~g~v~~~l~~~pel  483 (562)
                      ||+ .+++||||||+||+++.++                    .++|+|||+++....        .....+..|++||.
T Consensus       122 LH~-~~i~H~dl~p~ni~i~~~~--------------------~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~  180 (264)
T cd06653         122 LHS-NMIVHRDIKGANILRDSAG--------------------NVKLGDFGASKRIQTICMSGTGIKSVTGTPYWMSPEV  180 (264)
T ss_pred             HHh-CCEecCCCCHHHEEEcCCC--------------------CEEECccccccccccccccCccccccCCcccccCHhh
Confidence            999 7999999999999998876                    699999999986532        11234556889998


Q ss_pred             cCCC-CCcHHHHHHHhhcccCCCCCCCCCCChhhhHHHHHHHHhhcccCCCCCCCchhHHHHHHHHHHHhcCCCc
Q psy9184         484 FEGE-GDYQFDMYRMMRKQCQNNWQNFTPKNNVFWIHYLVDKATCLKKGYQYLRAPRHQAFELLEELGQNALHFD  557 (562)
Q Consensus       484 F~g~-~~~q~dIy~lm~~~~~~~W~~~~P~tn~~wl~yl~~~Ll~~~~~~~~~~~~~~~~~~~l~~l~~~~l~~~  557 (562)
                      +.+. .+...|+|++. ........+..|+.+..-..-+.+.... ... +.   ......+.+..|.+.+++..
T Consensus       181 ~~~~~~~~~~Di~slG-~il~~l~~g~~p~~~~~~~~~~~~~~~~-~~~-~~---~p~~~~~~~~~~i~~~l~~~  249 (264)
T cd06653         181 ISGEGYGRKADVWSVA-CTVVEMLTEKPPWAEYEAMAAIFKIATQ-PTK-PM---LPDGVSDACRDFLKQIFVEE  249 (264)
T ss_pred             hcCCCCCccccHHHHH-HHHHHHHhCCCCCCccCHHHHHHHHHcC-CCC-CC---CCcccCHHHHHHHHHHhcCc
Confidence            8774 34558888753 2222333445555443222222222211 111 10   11122456777788887753

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho

>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase

Probab=99.89  E-value=8.3e-23  Score=203.32  Aligned_cols=232  Identities=16%  Similarity=0.161  Sum_probs=166.4

Q ss_pred             CCCceeeeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCccccc
Q psy9184         261 SALKNCKKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTEL  334 (562)
Q Consensus       261 ~~y~~~~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~l  334 (562)
                      ++|++.+.||.|+||.||+|      ..+|+|++.....       ......+.+|+.+++.++|               
T Consensus         1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~-------~~~~~~~~~e~~~l~~l~~---------------   58 (267)
T cd06610           1 DDYELIEVIGVGATAVVYAAICLPNNEKVAIKRIDLEKC-------QTSVDELRKEVQAMSQCNH---------------   58 (267)
T ss_pred             CcceeeeeecCCCCeEEEEEEEcCCCcEEEEEEeccCCc-------chHHHHHHHHHHHHHhcCC---------------
Confidence            36889999999999999999      6899999876431       1245678999999999998               


Q ss_pred             ccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc------cCCHHHHHHHHHHHHHH
Q psy9184         335 LKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK------YRSPNQTYAMILQVVFS  408 (562)
Q Consensus       335 ~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~------~l~e~~i~~I~~QIl~a  408 (562)
                                 +|++++++.+..             ++..|++||++.|+++.+.+.      .+++..+..++.||+.|
T Consensus        59 -----------~~i~~~~~~~~~-------------~~~~~iv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ql~~a  114 (267)
T cd06610          59 -----------PNVVKYYTSFVV-------------GDELWLVMPYLSGGSLLDIMKSSYPRGGLDEAIIATVLKEVLKG  114 (267)
T ss_pred             -----------CCEEEEEEEEee-------------CCEEEEEEeccCCCcHHHHHHHhcccCCCCHHHHHHHHHHHHHH
Confidence                       999999888765             558999999999998776653      37899999999999999


Q ss_pred             HHHHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecCCc---------EEEeecCC
Q psy9184         409 LAVAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVGEK---------ICYYDLSQ  479 (562)
Q Consensus       409 L~yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~~g---------~v~~~l~~  479 (562)
                      |.|||+ .||+||||+|+||+++.++                    .++|+|||++.......         ...+..|+
T Consensus       115 l~~lh~-~~i~h~~l~p~ni~~~~~~--------------------~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~y~  173 (267)
T cd06610         115 LEYLHS-NGQIHRDIKAGNILLGEDG--------------------SVKIADFGVSASLADGGDRTRKVRKTFVGTPCWM  173 (267)
T ss_pred             HHHHHh-CCeecCCCCHHhEEEcCCC--------------------CEEEcccchHHHhccCccccccccccccCChhhc
Confidence            999999 7999999999999999876                    69999999987665421         23456688


Q ss_pred             CccccCCC--CCcHHHHHHHhhcccCCCCCCCCCCChhhhHHHHHHHHhhcccCCCCCCCchhHHHHHHHHHHHhcCCCc
Q psy9184         480 DEELFEGE--GDYQFDMYRMMRKQCQNNWQNFTPKNNVFWIHYLVDKATCLKKGYQYLRAPRHQAFELLEELGQNALHFD  557 (562)
Q Consensus       480 ~pelF~g~--~~~q~dIy~lm~~~~~~~W~~~~P~tn~~wl~yl~~~Ll~~~~~~~~~~~~~~~~~~~l~~l~~~~l~~~  557 (562)
                      +||.+...  .+.+.|+|++ |......+.+..|+.+......+...+......+.... ........+.+|...++..+
T Consensus       174 ~Pe~~~~~~~~~~~~Dv~sl-G~i~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~li~~~l~~~  251 (267)
T cd06610         174 APEVMEQVHGYDFKADIWSF-GITAIELATGAAPYSKYPPMKVLMLTLQNDPPSLETGA-DYKKYSKSFRKMISLCLQKD  251 (267)
T ss_pred             ChHHHccccCcCcccchHhH-hHHHHHHHhCCCCccccChhhhHHHHhcCCCCCcCCcc-ccccccHHHHHHHHHHcCCC
Confidence            88876653  4556888875 33333444455555443333222222221001111110 00122456778888888887


Q ss_pred             CcCC
Q psy9184         558 SCYE  561 (562)
Q Consensus       558 s~~~  561 (562)
                      ...|
T Consensus       252 p~~R  255 (267)
T cd06610         252 PSKR  255 (267)
T ss_pred             hhhC
Confidence            7665

Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1

>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2

Probab=99.89  E-value=7.8e-23  Score=208.72  Aligned_cols=174  Identities=22%  Similarity=0.264  Sum_probs=137.0

Q ss_pred             CCCCCCceeeeeeccCceEEEEE----------------------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHH
Q psy9184         258 YPSSALKNCKKIGEGVYGEVFKL----------------------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTK  315 (562)
Q Consensus       258 ~~~~~y~~~~~LG~GsfG~Vyka----------------------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk  315 (562)
                      |+..+|++.++||+|+||.||+|                      ..+|+|++....       .......+.+|+.+++
T Consensus         2 ~~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~~~~~~-------~~~~~~~~~~E~~~l~   74 (296)
T cd05095           2 FPRKRLTFKEKLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLREDA-------NKNARNDFLKEIKIMS   74 (296)
T ss_pred             CChhhceeeeeccCCCCCeEEecccccccccccccccccCCCCceeEEEEEeccccC-------CHHHHHHHHHHHHHHH
Confidence            35678999999999999999986                      258999887542       2334567889999999


Q ss_pred             hcCCccccCCCCCCcccccccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc----
Q psy9184         316 ETSDLQYRTENSTPCFTELLKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK----  391 (562)
Q Consensus       316 ~L~h~~~~~~n~~p~fv~l~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~----  391 (562)
                      .++|                          |||+++++++..             ++..|++|||+.+|++.+.+.    
T Consensus        75 ~l~~--------------------------~~i~~~~~~~~~-------------~~~~~lv~e~~~~~~L~~~l~~~~~  115 (296)
T cd05095          75 RLKD--------------------------PNIIRLLAVCIT-------------SDPLCMITEYMENGDLNQFLSRHEP  115 (296)
T ss_pred             hCCC--------------------------CCcceEEEEEec-------------CCccEEEEEeCCCCcHHHHHHhcCc
Confidence            9988                          999999998865             457899999999997765543    


Q ss_pred             ----------cCCHHHHHHHHHHHHHHHHHHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEec
Q psy9184         392 ----------YRSPNQTYAMILQVVFSLAVAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDF  461 (562)
Q Consensus       392 ----------~l~e~~i~~I~~QIl~aL~yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DF  461 (562)
                                .+++..+..++.||+.||+|||+ +||+||||||+|||++.++                    .++|+||
T Consensus       116 ~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~-~~i~H~dlkp~Nili~~~~--------------------~~~l~df  174 (296)
T cd05095         116 QEAAEKADVVTISYSTLIFMATQIASGMKYLSS-LNFVHRDLATRNCLVGKNY--------------------TIKIADF  174 (296)
T ss_pred             ccccccccccccCHHHHHHHHHHHHHHHHHHHH-CCeecccCChheEEEcCCC--------------------CEEeccC
Confidence                      25667899999999999999999 7999999999999998775                    7999999


Q ss_pred             cceeeecCCc-------EEEeecCCCcccc-CCCCCcHHHHHHHh
Q psy9184         462 TISRCFVGEK-------ICYYDLSQDEELF-EGEGDYQFDMYRMM  498 (562)
Q Consensus       462 GLSr~~~~~g-------~v~~~l~~~pelF-~g~~~~q~dIy~lm  498 (562)
                      |+++......       ......|++||.. .+......|+|++.
T Consensus       175 g~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~DiwSlG  219 (296)
T cd05095         175 GMSRNLYSGDYYRIQGRAVLPIRWMSWESILLGKFTTASDVWAFG  219 (296)
T ss_pred             cccccccCCcceeccCcCcCccccCCHHHHhcCCccchhhhhHHH
Confidence            9998654321       1113346777743 34455668888854

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit

>KOG0668|consensus

Probab=99.89  E-value=6.9e-24  Score=205.31  Aligned_cols=172  Identities=19%  Similarity=0.278  Sum_probs=141.8

Q ss_pred             CCCCCceeeeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCccc
Q psy9184         259 PSSALKNCKKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFT  332 (562)
Q Consensus       259 ~~~~y~~~~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv  332 (562)
                      ..++|++.+++|+|.|++||.|      +.++||+++.-           ....+.+|+.||+.|..             
T Consensus        36 ~~ddYeivrk~GRGKYSEVFeg~~~~~~eK~ViKiLKPV-----------kkkKIkREikIL~nL~g-------------   91 (338)
T KOG0668|consen   36 NQDDYEIVRKVGRGKYSEVFEGINITNNEKCVIKILKPV-----------KKKKIKREIKILQNLRG-------------   91 (338)
T ss_pred             ccchHHHHHHHcCccHhhHhcccccCCCceEEEeeechH-----------HHHHHHHHHHHHHhccC-------------
Confidence            3478999999999999999999      89999999842           23578899999999996             


Q ss_pred             ccccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccccCCHHHHHHHHHHHHHHHHHH
Q psy9184         333 ELLKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIKYRSPNQTYAMILQVVFSLAVA  412 (562)
Q Consensus       333 ~l~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~~l~e~~i~~I~~QIl~aL~yL  412 (562)
                                  +|||+++++...+..           .....|++||+++-+....+..++..+++.++.|++.||.|+
T Consensus        92 ------------g~NIi~L~DiV~Dp~-----------SktpaLiFE~v~n~Dfk~ly~tl~d~dIryY~~elLkALdyC  148 (338)
T KOG0668|consen   92 ------------GPNIIKLLDIVKDPE-----------SKTPSLIFEYVNNTDFKQLYPTLTDYDIRYYIYELLKALDYC  148 (338)
T ss_pred             ------------CCCeeehhhhhcCcc-----------ccCchhHhhhhccccHHHHhhhhchhhHHHHHHHHHHHHhHH
Confidence                        599999999998743           346779999998765555556799999999999999999999


Q ss_pred             HhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecCC----cEEEeecCCCccccCC--
Q psy9184         413 EVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVGE----KICYYDLSQDEELFEG--  486 (562)
Q Consensus       413 H~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~~----g~v~~~l~~~pelF~g--  486 (562)
                      |+ +||+|||+||.|++|+....                   .++|+|+|||.+..+.    --+....+.|||++..  
T Consensus       149 HS-~GImHRDVKPhNvmIdh~~r-------------------kLrlIDWGLAEFYHp~~eYnVRVASRyfKGPELLVdy~  208 (338)
T KOG0668|consen  149 HS-MGIMHRDVKPHNVMIDHELR-------------------KLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDYQ  208 (338)
T ss_pred             Hh-cCcccccCCcceeeechhhc-------------------eeeeeecchHhhcCCCceeeeeeehhhcCCchheeech
Confidence            99 89999999999999998865                   7999999999988762    2344556667777665  


Q ss_pred             CCCcHHHHHHH
Q psy9184         487 EGDYQFDMYRM  497 (562)
Q Consensus       487 ~~~~q~dIy~l  497 (562)
                      .++|.-|+|+.
T Consensus       209 ~YDYSLD~WS~  219 (338)
T KOG0668|consen  209 MYDYSLDMWSL  219 (338)
T ss_pred             hccccHHHHHH
Confidence            35666777664

>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases

Probab=99.89  E-value=1.8e-22  Score=205.05  Aligned_cols=173  Identities=21%  Similarity=0.258  Sum_probs=139.2

Q ss_pred             CCCceeeeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCccccc
Q psy9184         261 SALKNCKKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTEL  334 (562)
Q Consensus       261 ~~y~~~~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~l  334 (562)
                      ++|...++||.|+||.||+|      +.+|+|++....       .......+.+|+.+++.++|               
T Consensus         1 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~-------~~~~~~~~~~e~~~l~~l~h---------------   58 (287)
T cd06621           1 EKIVELSRLGEGAGGSVTKCRLKNTGMIFALKTITTDP-------NPDLQKQILRELEINKSCKS---------------   58 (287)
T ss_pred             CceEEEEEeccCCceEEEEEEECCCCeEEEEEEEecCC-------chHHHHHHHHHHHHHHhCCC---------------
Confidence            35788999999999999999      789999988643       12344678899999999998               


Q ss_pred             ccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc-------cCCHHHHHHHHHHHHH
Q psy9184         335 LKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK-------YRSPNQTYAMILQVVF  407 (562)
Q Consensus       335 ~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~-------~l~e~~i~~I~~QIl~  407 (562)
                                 |||+++++.|....           .+.+|+||||++||++.+.+.       .+++..+..++.||+.
T Consensus        59 -----------~~iv~~~~~~~~~~-----------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~  116 (287)
T cd06621          59 -----------PYIVKYYGAFLDES-----------SSSIGIAMEYCEGGSLDSIYKKVKKRGGRIGEKVLGKIAESVLK  116 (287)
T ss_pred             -----------CCeeeeeeEEEccC-----------CCeEEEEEEecCCCCHHHHHHHHHhcCCCCCHHHHHHHHHHHHH
Confidence                       99999998886422           457899999999987755432       3788999999999999


Q ss_pred             HHHHHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecCC---cEEEeecCCCcccc
Q psy9184         408 SLAVAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVGE---KICYYDLSQDEELF  484 (562)
Q Consensus       408 aL~yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~~---g~v~~~l~~~pelF  484 (562)
                      ||+|||+ .+++||||+|+||+++.++                    .++|+|||++......   .......|++||.+
T Consensus       117 ~L~~lH~-~~i~H~dl~~~nil~~~~~--------------------~~~l~dfg~~~~~~~~~~~~~~~~~~y~~pE~~  175 (287)
T cd06621         117 GLSYLHS-RKIIHRDIKPSNILLTRKG--------------------QVKLCDFGVSGELVNSLAGTFTGTSFYMAPERI  175 (287)
T ss_pred             HHHHHHH-CCcccCCCCHHHEEEecCC--------------------eEEEeeccccccccccccccccCCccccCHHHh
Confidence            9999999 7999999999999998876                    7999999998765431   12235567889877


Q ss_pred             CC-CCCcHHHHHHHh
Q psy9184         485 EG-EGDYQFDMYRMM  498 (562)
Q Consensus       485 ~g-~~~~q~dIy~lm  498 (562)
                      .+ ..+...|+|.+.
T Consensus       176 ~~~~~~~~~Dv~slG  190 (287)
T cd06621         176 QGKPYSITSDVWSLG  190 (287)
T ss_pred             cCCCCCchhhHHHHH
Confidence            65 456668998754

Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases

Probab=99.89  E-value=1.1e-22  Score=204.19  Aligned_cols=238  Identities=16%  Similarity=0.120  Sum_probs=161.7

Q ss_pred             CCceeeeeeccCceEEEEE------eeEEEEEeecCCCCCCc--chhHHHHHHHHHHHHHHHhcCCccccCCCCCCcccc
Q psy9184         262 ALKNCKKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVN--GEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTE  333 (562)
Q Consensus       262 ~y~~~~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~--~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~  333 (562)
                      +|...+.||.|+||.||+|      +.+|+|.+.........  .......+.+.+|+.+++.++|              
T Consensus         2 ~~~~~~~lg~g~~~~vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h--------------   67 (272)
T cd06629           2 KWVKGELIGKGTYGRVYLALNVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDLDH--------------   67 (272)
T ss_pred             ceeecceecccCceEEEEEeecCCCceeeeeeeechhhhhcccchHHHHHHHHHHHHHHHHHhcCC--------------
Confidence            4778899999999999999      78999998753211111  1112234577889999999998              


Q ss_pred             cccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc---cCCHHHHHHHHHHHHHHHH
Q psy9184         334 LLKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK---YRSPNQTYAMILQVVFSLA  410 (562)
Q Consensus       334 l~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~---~l~e~~i~~I~~QIl~aL~  410 (562)
                                  ||++++++++..             .+..++||||++||++.+.+.   .+++..+..++.||+.||.
T Consensus        68 ------------~~i~~~~~~~~~-------------~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~  122 (272)
T cd06629          68 ------------LNIVQYLGFETT-------------EEYLSIFLEYVPGGSIGSCLRTYGRFEEQLVRFFTEQVLEGLA  122 (272)
T ss_pred             ------------CCcceEEEEecc-------------CCceEEEEecCCCCcHHHHHhhccCCCHHHHHHHHHHHHHHHH
Confidence                        999999988764             558999999999998766553   4889999999999999999


Q ss_pred             HHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecCC-------cEEEeecCCCccc
Q psy9184         411 VAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVGE-------KICYYDLSQDEEL  483 (562)
Q Consensus       411 yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~~-------g~v~~~l~~~pel  483 (562)
                      |||+ .+++||||+|+||+++.++                    .++|+|||+++.....       ....+..|.+||.
T Consensus       123 ~lH~-~~i~H~dl~~~nil~~~~~--------------------~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~y~~PE~  181 (272)
T cd06629         123 YLHS-KGILHRDLKADNLLVDADG--------------------ICKISDFGISKKSDDIYDNDQNMSMQGSVFWMAPEV  181 (272)
T ss_pred             HHhh-CCeeecCCChhhEEEcCCC--------------------eEEEeeccccccccccccccccccccCCccccCHHH
Confidence            9999 7999999999999999876                    7999999999865421       1123456788998


Q ss_pred             cCCC---CCcHHHHHHHhhcccCCCCCCCCCCChhhhHHHHHHHHhhcccCCCCCCCchhHHHHHHHHHHHhcCCCcCcC
Q psy9184         484 FEGE---GDYQFDMYRMMRKQCQNNWQNFTPKNNVFWIHYLVDKATCLKKGYQYLRAPRHQAFELLEELGQNALHFDSCY  560 (562)
Q Consensus       484 F~g~---~~~q~dIy~lm~~~~~~~W~~~~P~tn~~wl~yl~~~Ll~~~~~~~~~~~~~~~~~~~l~~l~~~~l~~~s~~  560 (562)
                      +.+.   .+.+.|+|++. ........+..|+.+...+.-+...... .....-+..........+.+|...++..+...
T Consensus       182 ~~~~~~~~~~~~Dv~slG-~~l~~l~~g~~p~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~  259 (272)
T cd06629         182 IHSYSQGYSAKVDIWSLG-CVVLEMFAGRRPWSDEEAIAAMFKLGNK-RSAPPIPPDVSMNLSPVALDFLNACFTINPDN  259 (272)
T ss_pred             hccccCCCCccchhHHHH-HHHHHHHhCCCCCcCcchHHHHHHhhcc-ccCCcCCccccccCCHHHHHHHHHHhcCChhh
Confidence            7764   34558888863 3332333344444322211111111111 11111111000012456777888888877665


Q ss_pred             C
Q psy9184         561 E  561 (562)
Q Consensus       561 ~  561 (562)
                      |
T Consensus       260 R  260 (272)
T cd06629         260 R  260 (272)
T ss_pred             C
Confidence            5

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte

>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase

Probab=99.89  E-value=2.1e-22  Score=201.60  Aligned_cols=169  Identities=24%  Similarity=0.289  Sum_probs=137.9

Q ss_pred             CCCceeeeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCccccc
Q psy9184         261 SALKNCKKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTEL  334 (562)
Q Consensus       261 ~~y~~~~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~l  334 (562)
                      .+|.+.+.||+|+||.||+|      ..||+|++....         .....+.+|+.+++.++|               
T Consensus         6 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~K~~~~~~---------~~~~~~~~e~~~l~~l~h---------------   61 (263)
T cd05052           6 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT---------MEVEEFLKEAAVMKEIKH---------------   61 (263)
T ss_pred             HHeEEeeecCCcccceEEEEEEecCCceEEEEEecCCc---------hHHHHHHHHHHHHHhCCC---------------
Confidence            45888899999999999999      789999987432         223568899999999998               


Q ss_pred             ccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc-----cCCHHHHHHHHHHHHHHH
Q psy9184         335 LKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK-----YRSPNQTYAMILQVVFSL  409 (562)
Q Consensus       335 ~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~-----~l~e~~i~~I~~QIl~aL  409 (562)
                                 |||+++++.+..             ++.++++|||+++|++.+.+.     .+++..++.++.|++.||
T Consensus        62 -----------~~i~~~~~~~~~-------------~~~~~lv~e~~~~~~L~~~~~~~~~~~l~~~~~~~~~~ql~~~l  117 (263)
T cd05052          62 -----------PNLVQLLGVCTR-------------EPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAM  117 (263)
T ss_pred             -----------CChhheEEEEcC-------------CCCcEEEEEeCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHH
Confidence                       999999988764             557899999999998876553     378899999999999999


Q ss_pred             HHHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecCCc------EEEeecCCCccc
Q psy9184         410 AVAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVGEK------ICYYDLSQDEEL  483 (562)
Q Consensus       410 ~yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~~g------~v~~~l~~~pel  483 (562)
                      +|||+ .+++||||||+|||++.++                    .++|+|||+++......      ..++..|++||.
T Consensus       118 ~~lH~-~~i~H~dlkp~nil~~~~~--------------------~~kl~df~~~~~~~~~~~~~~~~~~~~~~y~aPE~  176 (263)
T cd05052         118 EYLEK-KNFIHRDLAARNCLVGENH--------------------LVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPES  176 (263)
T ss_pred             HHHHh-CCEeecccCcceEEEcCCC--------------------cEEeCCCccccccccceeeccCCCCCccccCCHHH
Confidence            99999 7999999999999998876                    79999999998765421      112345889998


Q ss_pred             cCC-CCCcHHHHHHHh
Q psy9184         484 FEG-EGDYQFDMYRMM  498 (562)
Q Consensus       484 F~g-~~~~q~dIy~lm  498 (562)
                      +.+ ....+.|||++.
T Consensus       177 ~~~~~~~~~~Dv~slG  192 (263)
T cd05052         177 LAYNKFSIKSDVWAFG  192 (263)
T ss_pred             hccCCCCchhHHHHHH
Confidence            766 345568998853

Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays

>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=99.89  E-value=1.5e-22  Score=205.23  Aligned_cols=173  Identities=19%  Similarity=0.223  Sum_probs=136.7

Q ss_pred             CCceeeeeeccCceEEEEE----------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCcc
Q psy9184         262 ALKNCKKIGEGVYGEVFKL----------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCF  331 (562)
Q Consensus       262 ~y~~~~~LG~GsfG~Vyka----------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~f  331 (562)
                      -|++++.||+|+||.||+|          ..||+|.+....       .......+.+|+.+++.+.|            
T Consensus         5 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~va~K~~~~~~-------~~~~~~~~~~e~~~l~~l~h------------   65 (284)
T cd05079           5 FLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPES-------GGNHIADLKKEIEILRNLYH------------   65 (284)
T ss_pred             hhhhceecCCCCceeEEEEEEccCCCCccceEEEEEcCccc-------cHHHHHHHHHHHHHHHhCCC------------
Confidence            3788999999999999987          579999987542       13334678899999999998            


Q ss_pred             cccccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc----cCCHHHHHHHHHHHHH
Q psy9184         332 TELLKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK----YRSPNQTYAMILQVVF  407 (562)
Q Consensus       332 v~l~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~----~l~e~~i~~I~~QIl~  407 (562)
                                    ||++++++++....           ....|+||||++||++.+.+.    .+++..+..++.||+.
T Consensus        66 --------------~~i~~~~~~~~~~~-----------~~~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~i~~~i~~  120 (284)
T cd05079          66 --------------ENIVKYKGICTEDG-----------GNGIKLIMEFLPSGSLKEYLPRNKNKINLKQQLKYAVQICK  120 (284)
T ss_pred             --------------CCeeeeeeEEecCC-----------CCceEEEEEccCCCCHHHHHHhccCCCCHHHHHHHHHHHHH
Confidence                          99999988776421           346899999999997765542    3789999999999999


Q ss_pred             HHHHHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecCCc--------EEEeecCC
Q psy9184         408 SLAVAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVGEK--------ICYYDLSQ  479 (562)
Q Consensus       408 aL~yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~~g--------~v~~~l~~  479 (562)
                      ||+|||+ .||+||||||+|||++.++                    .++|+|||+++......        ......|.
T Consensus       121 aL~~lH~-~gi~H~dlkp~Nil~~~~~--------------------~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~  179 (284)
T cd05079         121 GMDYLGS-RQYVHRDLAARNVLVESEH--------------------QVKIGDFGLTKAIETDKEYYTVKDDLDSPVFWY  179 (284)
T ss_pred             HHHHHHH-CCeeecccchheEEEcCCC--------------------CEEECCCccccccccCccceeecCCCCCCcccc
Confidence            9999999 7999999999999998876                    69999999998664321        11233577


Q ss_pred             CccccCC-CCCcHHHHHHHhh
Q psy9184         480 DEELFEG-EGDYQFDMYRMMR  499 (562)
Q Consensus       480 ~pelF~g-~~~~q~dIy~lm~  499 (562)
                      +||.+.+ ......|||++..
T Consensus       180 apE~~~~~~~~~~~Di~slG~  200 (284)
T cd05079         180 APECLIQSKFYIASDVWSFGV  200 (284)
T ss_pred             CHHHhccCCCCccccchhhhh
Confidence            8887655 3445688888643

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a

>PHA03210 serine/threonine kinase US3; Provisional

Probab=99.89  E-value=4.2e-23  Score=227.94  Aligned_cols=180  Identities=13%  Similarity=0.140  Sum_probs=133.1

Q ss_pred             CCCceeeeeeccCceEEEEE-------eeEEEEEeecCCCCCC---------cchhHHHHHHHHHHHHHHHhcCCccccC
Q psy9184         261 SALKNCKKIGEGVYGEVFKL-------NNSVIKIMPIEGDQSV---------NGEEQKKFREIFSEIMVTKETSDLQYRT  324 (562)
Q Consensus       261 ~~y~~~~~LG~GsfG~Vyka-------~~vAIKii~~~~~~~~---------~~~~~~~~~~il~Ei~ilk~L~h~~~~~  324 (562)
                      .+|+++++||+|+||+||+|       ...+.|.+........         ..........+.+|+.+|+.++|     
T Consensus       148 ~~Y~ii~~LG~G~fG~Vyl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~Ei~il~~l~H-----  222 (501)
T PHA03210        148 AHFRVIDDLPAGAFGKIFICALRASTEEAEARRGVNSTNQGKPKCERLIAKRVKAGSRAAIQLENEILALGRLNH-----  222 (501)
T ss_pred             hccEEEeEecCCCCcceEEEEEeccchhhhhhhccccccccchhhhhhHhHHhhcchHHHHHHHHHHHHHHhCCC-----
Confidence            57999999999999999987       1222221111000000         00112234567899999999998     


Q ss_pred             CCCCCcccccccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc--------cCCHH
Q psy9184         325 ENSTPCFTELLKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK--------YRSPN  396 (562)
Q Consensus       325 ~n~~p~fv~l~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~--------~l~e~  396 (562)
                                           |||+++++++..             .+..|+|||++. +.++..+.        .....
T Consensus       223 ---------------------pnIv~l~~~~~~-------------~~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~  267 (501)
T PHA03210        223 ---------------------ENILKIEEILRS-------------EANTYMITQKYD-FDLYSFMYDEAFDWKDRPLLK  267 (501)
T ss_pred             ---------------------CCcCcEeEEEEE-------------CCeeEEEEeccc-cCHHHHHhhccccccccccHH
Confidence                                 999999999875             457899999985 44554432        13356


Q ss_pred             HHHHHHHHHHHHHHHHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecC------C
Q psy9184         397 QTYAMILQVVFSLAVAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVG------E  470 (562)
Q Consensus       397 ~i~~I~~QIl~aL~yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~------~  470 (562)
                      +++.|+.||+.||.|||+ +||+||||||+|||++.++                    .+||+|||+|+....      .
T Consensus       268 ~~~~i~~ql~~aL~yLH~-~gIiHrDLKP~NILl~~~~--------------------~vkL~DFGla~~~~~~~~~~~~  326 (501)
T PHA03210        268 QTRAIMKQLLCAVEYIHD-KKLIHRDIKLENIFLNCDG--------------------KIVLGDFGTAMPFEKEREAFDY  326 (501)
T ss_pred             HHHHHHHHHHHHHHHHHh-CCeecCCCCHHHEEECCCC--------------------CEEEEeCCCceecCcccccccc
Confidence            788999999999999999 7999999999999999886                    799999999987653      2


Q ss_pred             cEEEeecCCCccccCCC-CCcHHHHHHHhhcc
Q psy9184         471 KICYYDLSQDEELFEGE-GDYQFDMYRMMRKQ  501 (562)
Q Consensus       471 g~v~~~l~~~pelF~g~-~~~q~dIy~lm~~~  501 (562)
                      +.+++..|++||++.+. .+...|||++.-..
T Consensus       327 ~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil  358 (501)
T PHA03210        327 GWVGTVATNSPEILAGDGYCEITDIWSCGLIL  358 (501)
T ss_pred             cccCCcCCCCchhhcCCCCCcHHHHHHHHHHH
Confidence            34567889999998874 45568998864433

>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors

Probab=99.89  E-value=1.1e-22  Score=206.64  Aligned_cols=174  Identities=21%  Similarity=0.242  Sum_probs=140.7

Q ss_pred             CCCCCceeeeeeccCceEEEEE----------------------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHh
Q psy9184         259 PSSALKNCKKIGEGVYGEVFKL----------------------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKE  316 (562)
Q Consensus       259 ~~~~y~~~~~LG~GsfG~Vyka----------------------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~  316 (562)
                      +..+|++.+.||+|+||.||+|                      ..||+|.+....       .......+.+|+.+++.
T Consensus         3 ~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~va~K~~~~~~-------~~~~~~~~~~e~~~l~~   75 (296)
T cd05051           3 PRQPLNFVEKLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDA-------SDNAREDFLKEVKILSR   75 (296)
T ss_pred             chhhCcccccccCCCCccEEEEEeccCCcccccccccccccCCceeEEEEEecCcc-------CHHHHHHHHHHHHHHHh
Confidence            4578999999999999999997                      238999987643       12445678899999999


Q ss_pred             cCCccccCCCCCCcccccccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc-----
Q psy9184         317 TSDLQYRTENSTPCFTELLKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK-----  391 (562)
Q Consensus       317 L~h~~~~~~n~~p~fv~l~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~-----  391 (562)
                      ++|                          |||+++++++..             ++..+++||++.+|++...+.     
T Consensus        76 l~~--------------------------~~i~~~~~~~~~-------------~~~~~lv~e~~~~~~L~~~l~~~~~~  116 (296)
T cd05051          76 LSD--------------------------PNIARLLGVCTV-------------DPPLCMIMEYMENGDLNQFLQKHVAE  116 (296)
T ss_pred             cCC--------------------------CCEeEEEEEEec-------------CCCcEEEEecCCCCCHHHHHHhcccc
Confidence            998                          999999988864             458899999999887755442     


Q ss_pred             ---------cCCHHHHHHHHHHHHHHHHHHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEecc
Q psy9184         392 ---------YRSPNQTYAMILQVVFSLAVAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFT  462 (562)
Q Consensus       392 ---------~l~e~~i~~I~~QIl~aL~yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFG  462 (562)
                               .+++..++.++.|++.||+|||+ .+|+||||||+||+++.++                    .++|+|||
T Consensus       117 ~~~~~~~~~~~~~~~~~~~~~~i~~al~~LH~-~~i~H~dlkp~Nili~~~~--------------------~~~l~dfg  175 (296)
T cd05051         117 TSGLACNSKSLSFSTLLYMATQIASGMRYLES-LNFVHRDLATRNCLVGKNY--------------------TIKIADFG  175 (296)
T ss_pred             cccccccCCCCCHHHHHHHHHHHHHHHHHHHH-cCccccccchhceeecCCC--------------------ceEEcccc
Confidence                     47889999999999999999999 7999999999999999886                    79999999


Q ss_pred             ceeeecCC-------cEEEeecCCCccccCC-CCCcHHHHHHHhh
Q psy9184         463 ISRCFVGE-------KICYYDLSQDEELFEG-EGDYQFDMYRMMR  499 (562)
Q Consensus       463 LSr~~~~~-------g~v~~~l~~~pelF~g-~~~~q~dIy~lm~  499 (562)
                      +++.....       ...++..|++||.+.+ ......|||++.-
T Consensus       176 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~  220 (296)
T cd05051         176 MSRNLYSSDYYRVQGRAPLPIRWMAWESVLLGKFTTKSDVWAFGV  220 (296)
T ss_pred             ceeecccCcceeecCcCCCCceecCHHHhhcCCCCccchhhhhHH
Confidence            99875432       1222345889998765 4566689888543

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke

>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors

Probab=99.89  E-value=1.7e-22  Score=202.78  Aligned_cols=171  Identities=22%  Similarity=0.231  Sum_probs=138.0

Q ss_pred             CCCceeeeeeccCceEEEEE---------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCcc
Q psy9184         261 SALKNCKKIGEGVYGEVFKL---------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCF  331 (562)
Q Consensus       261 ~~y~~~~~LG~GsfG~Vyka---------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~f  331 (562)
                      .+|++.+.||+|+||.||+|         ..+|+|.+....       .......+.+|+.+++.++|            
T Consensus         4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~-------~~~~~~~~~~e~~~l~~l~h------------   64 (267)
T cd05066           4 SCIKIEKVIGAGEFGEVCSGRLKLPGKREIPVAIKTLKAGY-------TEKQRRDFLSEASIMGQFDH------------   64 (267)
T ss_pred             HHeEeeeeecccCCCceEEEEEecCCCCceEEEEEECCCCC-------CHHHHHHHHHHHHHHHhCCC------------
Confidence            56889999999999999998         258999887542       12334678899999999998            


Q ss_pred             cccccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc----cCCHHHHHHHHHHHHH
Q psy9184         332 TELLKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK----YRSPNQTYAMILQVVF  407 (562)
Q Consensus       332 v~l~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~----~l~e~~i~~I~~QIl~  407 (562)
                                    |||+++++++..             ++..|+||||+++|++.+.+.    .+++.++..++.|++.
T Consensus        65 --------------~~i~~~~~~~~~-------------~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~  117 (267)
T cd05066          65 --------------PNIIHLEGVVTK-------------SKPVMIVTEYMENGSLDAFLRKHDGQFTVIQLVGMLRGIAS  117 (267)
T ss_pred             --------------CCcceEEEEEec-------------CCccEEEEEcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHH
Confidence                          999999988864             557899999999987765553    3788999999999999


Q ss_pred             HHHHHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecCCc-EEE-------eecCC
Q psy9184         408 SLAVAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVGEK-ICY-------YDLSQ  479 (562)
Q Consensus       408 aL~yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~~g-~v~-------~~l~~  479 (562)
                      ||.|||+ .+|+||||||+|||++.++                    .++|+|||+++...... +..       +..|+
T Consensus       118 ~l~~lH~-~~i~h~dlkp~nili~~~~--------------------~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~  176 (267)
T cd05066         118 GMKYLSD-MGYVHRDLAARNILVNSNL--------------------VCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWT  176 (267)
T ss_pred             HHHHHHH-CCEeehhhchhcEEECCCC--------------------eEEeCCCCcccccccccceeeecCCCccceeec
Confidence            9999999 7999999999999998876                    79999999998764321 111       23578


Q ss_pred             CccccCC-CCCcHHHHHHHh
Q psy9184         480 DEELFEG-EGDYQFDMYRMM  498 (562)
Q Consensus       480 ~pelF~g-~~~~q~dIy~lm  498 (562)
                      +||.+.+ ..+...|+|++.
T Consensus       177 ~pe~~~~~~~~~~~Dv~slG  196 (267)
T cd05066         177 APEAIAYRKFTSASDVWSYG  196 (267)
T ss_pred             CHhHhccCccCchhhhHHHH
Confidence            8998876 445568888753

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul

>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4

Probab=99.89  E-value=1.4e-22  Score=204.59  Aligned_cols=184  Identities=20%  Similarity=0.325  Sum_probs=146.4

Q ss_pred             CCCceeeeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCccccc
Q psy9184         261 SALKNCKKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTEL  334 (562)
Q Consensus       261 ~~y~~~~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~l  334 (562)
                      ..|+..++||.|+||.||+|      ..||+|++....       .......+.+|+.+++.+.|               
T Consensus         4 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~vaiK~~~~~~-------~~~~~~~~~~e~~~l~~l~h---------------   61 (277)
T cd06640           4 ELFTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEE-------AEDEIEDIQQEITVLSQCDS---------------   61 (277)
T ss_pred             HhhhhhhhcccCCCeEEEEEEEccCCEEEEEEEEeccc-------cHHHHHHHHHHHHHHHhCCC---------------
Confidence            45788899999999999999      689999988543       13345678899999999998               


Q ss_pred             ccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc--cCCHHHHHHHHHHHHHHHHHH
Q psy9184         335 LKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK--YRSPNQTYAMILQVVFSLAVA  412 (562)
Q Consensus       335 ~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~--~l~e~~i~~I~~QIl~aL~yL  412 (562)
                                 |+|+++++.+.+             ++..|+||||+.||++.+.+.  .+++.++..++.|++.||.||
T Consensus        62 -----------~~i~~~~~~~~~-------------~~~~~lv~e~~~~~~L~~~i~~~~l~~~~~~~~~~~l~~~l~~l  117 (277)
T cd06640          62 -----------PYVTKYYGSYLK-------------GTKLWIIMEYLGGGSALDLLRAGPFDEFQIATMLKEILKGLDYL  117 (277)
T ss_pred             -----------CCEeeEEEEEEE-------------CCEEEEEEecCCCCcHHHHHhcCCCCHHHHHHHHHHHHHHHHHH
Confidence                       999999998875             558999999999998877664  388999999999999999999


Q ss_pred             HhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecCCc-----EEEeecCCCccccCCC
Q psy9184         413 EVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVGEK-----ICYYDLSQDEELFEGE  487 (562)
Q Consensus       413 H~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~~g-----~v~~~l~~~pelF~g~  487 (562)
                      |+ .+++|+||+|+||+++.++                    .++|+|||++.......     ...+..|.+||.+.+.
T Consensus       118 h~-~~ivH~dl~p~Nil~~~~~--------------------~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~apE~~~~~  176 (277)
T cd06640         118 HS-EKKIHRDIKAANVLLSEQG--------------------DVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIQQS  176 (277)
T ss_pred             Hh-CCccCcCCChhhEEEcCCC--------------------CEEEcccccceeccCCccccccccCcccccCHhHhccC
Confidence            99 7999999999999999876                    69999999998765422     2335567899987663


Q ss_pred             -CCcHHHHHHHhhcccCCCCCCCCCC
Q psy9184         488 -GDYQFDMYRMMRKQCQNNWQNFTPK  512 (562)
Q Consensus       488 -~~~q~dIy~lm~~~~~~~W~~~~P~  512 (562)
                       .+.+.|+|++ |......+.+..|+
T Consensus       177 ~~~~~~Dv~sl-G~il~el~tg~~p~  201 (277)
T cd06640         177 AYDSKADIWSL-GITAIELAKGEPPN  201 (277)
T ss_pred             CCccHHHHHHH-HHHHHHHHHCCCCC
Confidence             4567899875 33332333344443

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter

>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha

Probab=99.89  E-value=9.8e-23  Score=211.52  Aligned_cols=182  Identities=14%  Similarity=0.138  Sum_probs=140.0

Q ss_pred             eeeeeecc--CceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCccccccc
Q psy9184         265 NCKKIGEG--VYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTELLK  336 (562)
Q Consensus       265 ~~~~LG~G--sfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~l~~  336 (562)
                      ++++||+|  +||+||++      +.||+|++....      ........+.+|+.+++.++|                 
T Consensus         2 ~~~~ig~G~~~~~~v~~~~~~~~~~~vaiK~~~~~~------~~~~~~~~~~~e~~~l~~l~h-----------------   58 (327)
T cd08227           2 LLTVIGRGFEDLMTVNLARYKPTGEYVTVRRINLEA------CTNEMVTFLQGELHVSKLFNH-----------------   58 (327)
T ss_pred             hhhhccccccceEEEEEEeecccCcEEEEEEechhh------ccHHHHHHHHHHHHHHHhcCC-----------------
Confidence            46789999  78899999      789999998653      123334567789999999998                 


Q ss_pred             ccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc-----cCCHHHHHHHHHHHHHHHHH
Q psy9184         337 CSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK-----YRSPNQTYAMILQVVFSLAV  411 (562)
Q Consensus       337 ~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~-----~l~e~~i~~I~~QIl~aL~y  411 (562)
                               |||++++++|..             ++..|+||||+++|++.+.+.     .+++..++.++.||+.||+|
T Consensus        59 ---------pniv~~~~~~~~-------------~~~~~lv~e~~~~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~  116 (327)
T cd08227          59 ---------PNIVPYRATFIA-------------DNELWVVTSFMAYGSAKDLICTHFMDGMSELAIAYILQGVLKALDY  116 (327)
T ss_pred             ---------CCeeeEEEEEEE-------------CCEEEEEEeccCCCcHHHHHHhhccCCCCHHHHHHHHHHHHHHHHH
Confidence                     999999999875             568999999999998766552     37899999999999999999


Q ss_pred             HHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecCCc------------EEEeecCC
Q psy9184         412 AEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVGEK------------ICYYDLSQ  479 (562)
Q Consensus       412 LH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~~g------------~v~~~l~~  479 (562)
                      ||+ .+|+||||||+|||++.++                    .++++|||.+......+            ...+..|+
T Consensus       117 LH~-~~iiH~dlkp~Nil~~~~~--------------------~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~  175 (327)
T cd08227         117 IHH-MGYVHRSVKASHILISVDG--------------------KVYLSGLRSNLSMINHGQRLRVVHDFPKYSVKVLPWL  175 (327)
T ss_pred             HHH-CCEecCCCChhhEEEecCC--------------------cEEEcccchhhccccccccccccccccccccceeccc
Confidence            999 7999999999999999886                    68899998654332211            12234578


Q ss_pred             CccccCCC---CCcHHHHHHHhhcccCCCCCCCCCCC
Q psy9184         480 DEELFEGE---GDYQFDMYRMMRKQCQNNWQNFTPKN  513 (562)
Q Consensus       480 ~pelF~g~---~~~q~dIy~lm~~~~~~~W~~~~P~t  513 (562)
                      +||.+.+.   .+...|||++.-. ....+.+..|+.
T Consensus       176 aPE~~~~~~~~~~~~~DiwslG~i-l~el~~g~~pf~  211 (327)
T cd08227         176 SPEVLQQNLQGYDAKSDIYSVGIT-ACELANGHVPFK  211 (327)
T ss_pred             ChHHhhcccCCCCchhhHHHHHHH-HHHHHHCCCCCC
Confidence            99998753   4556999986433 334445555553

Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype

>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4

Probab=99.89  E-value=2e-22  Score=201.40  Aligned_cols=233  Identities=14%  Similarity=0.138  Sum_probs=163.3

Q ss_pred             CCceeeeeeccCceEEEEE-----eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCccccccc
Q psy9184         262 ALKNCKKIGEGVYGEVFKL-----NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTELLK  336 (562)
Q Consensus       262 ~y~~~~~LG~GsfG~Vyka-----~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~l~~  336 (562)
                      +|+..+.||.|+||+||+|     ..+|+|.+.......  .........+.+|+.+++.++|                 
T Consensus         1 ~~~~~~~ig~g~~~~v~~~~~~~~~~~avk~~~~~~~~~--~~~~~~~~~~~~e~~~l~~l~~-----------------   61 (265)
T cd06631           1 EWTKGEVLGKGAYGTVYCGLTNQGQLIAVKQVELDTSNV--LAAEKEYEKLQEEVDLLKSLKH-----------------   61 (265)
T ss_pred             CccccceEeccCCeEEEEEEEcCCCeEEEEEeecCccch--hhHHHHHHHHHHHHHHHHhcCC-----------------
Confidence            3778899999999999999     679999988653211  1223445678899999999998                 


Q ss_pred             ccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc---cCCHHHHHHHHHHHHHHHHHHH
Q psy9184         337 CSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK---YRSPNQTYAMILQVVFSLAVAE  413 (562)
Q Consensus       337 ~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~---~l~e~~i~~I~~QIl~aL~yLH  413 (562)
                               +||+++++++.+             .+..|++|||++||++.+.+.   .+++..+..++.|++.||+|||
T Consensus        62 ---------~~i~~~~~~~~~-------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH  119 (265)
T cd06631          62 ---------VNIVQYLGTCLD-------------DNTISIFMEFVPGGSISSILNRFGPLPEPVFCKYTKQILDGVAYLH  119 (265)
T ss_pred             ---------CCEeeEeeEeec-------------CCeEEEEEecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH
Confidence                     999999998875             468999999999998766553   3789999999999999999999


Q ss_pred             hhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecC-----------CcEEEeecCCCcc
Q psy9184         414 VELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVG-----------EKICYYDLSQDEE  482 (562)
Q Consensus       414 ~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~-----------~g~v~~~l~~~pe  482 (562)
                      + .+|+|+||+|+||+++.++                    .++|+|||+++....           .....+..|.+||
T Consensus       120 ~-~~i~H~dl~p~nil~~~~~--------------------~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe  178 (265)
T cd06631         120 N-NCVVHRDIKGNNVMLMPNG--------------------IIKLIDFGCARRLAWVGLHGTHSNMLKSMHGTPYWMAPE  178 (265)
T ss_pred             h-CCcccCCcCHHhEEECCCC--------------------eEEeccchhhHhhhhccccccccccccccCCCccccChh
Confidence            9 7999999999999998776                    799999999876432           1122345678899


Q ss_pred             ccCCC-CCcHHHHHHHhhcccCCCCCCCCCCChhhhHHHHHHHHhhcccCCCCCCCchhHHHHHHHHHHHhcCCCcCcCC
Q psy9184         483 LFEGE-GDYQFDMYRMMRKQCQNNWQNFTPKNNVFWIHYLVDKATCLKKGYQYLRAPRHQAFELLEELGQNALHFDSCYE  561 (562)
Q Consensus       483 lF~g~-~~~q~dIy~lm~~~~~~~W~~~~P~tn~~wl~yl~~~Ll~~~~~~~~~~~~~~~~~~~l~~l~~~~l~~~s~~~  561 (562)
                      .+.+. .....|+|++.-... ..+.+..|+....-.......... ....+....   .....+..|.+.+|..+...|
T Consensus       179 ~~~~~~~~~~~Dv~slG~~~~-~l~~g~~p~~~~~~~~~~~~~~~~-~~~~~~~~~---~~~~~~~~~i~~~l~~~p~~R  253 (265)
T cd06631         179 VINESGYGRKSDIWSIGCTVF-EMATGKPPLASMDRLAAMFYIGAH-RGLMPRLPD---SFSAAAIDFVTSCLTRDQHER  253 (265)
T ss_pred             hhcCCCCcchhhHHHHHHHHH-HHHhCCCccccCChHHHHHHhhhc-cCCCCCCCC---CCCHHHHHHHHHHhcCCcccC
Confidence            88774 345689988643332 333444454322111111111111 011111111   124466778888887766554

Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.

>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer

Probab=99.89  E-value=1.3e-22  Score=200.82  Aligned_cols=221  Identities=18%  Similarity=0.160  Sum_probs=156.3

Q ss_pred             eeeeccCceEEEEE-----eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCcccccccccccC
Q psy9184         267 KKIGEGVYGEVFKL-----NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTELLKCSCVR  341 (562)
Q Consensus       267 ~~LG~GsfG~Vyka-----~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~l~~~~iv~  341 (562)
                      +.||+|+||.||+|     ..+|+|++....       .......+.+|+.+++.++|                      
T Consensus         1 ~~ig~g~~g~vy~~~~~~~~~~a~K~~~~~~-------~~~~~~~~~~e~~~l~~l~h----------------------   51 (250)
T cd05085           1 ELLGKGNFGEVFKGTLKDKTPVAVKTCKEDL-------PQELKIKFLSEARILKQYDH----------------------   51 (250)
T ss_pred             CccCCCCCceEEEEEecCCcEEEEEecCCcC-------CHHHHHHHHHHHHHHHhCCC----------------------
Confidence            36899999999999     679999887542       23334568899999999988                      


Q ss_pred             CCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc----cCCHHHHHHHHHHHHHHHHHHHhhCC
Q psy9184         342 GRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK----YRSPNQTYAMILQVVFSLAVAEVELE  417 (562)
Q Consensus       342 g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~----~l~e~~i~~I~~QIl~aL~yLH~~~~  417 (562)
                          |||+++++.+..             .+..|+||||+.+|++.+.+.    .+++..+..++.|++.||.|+|+ .|
T Consensus        52 ----~~i~~~~~~~~~-------------~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~-~~  113 (250)
T cd05085          52 ----PNIVKLIGVCTQ-------------RQPIYIVMELVPGGDFLSFLRKKKDELKTKQLVKFALDAAAGMAYLES-KN  113 (250)
T ss_pred             ----CCcCeEEEEEec-------------CCccEEEEECCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHh-CC
Confidence                999999988864             457899999999998876553    37899999999999999999999 79


Q ss_pred             eEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecCCcE------EEeecCCCccccCC-CCCc
Q psy9184         418 FEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVGEKI------CYYDLSQDEELFEG-EGDY  490 (562)
Q Consensus       418 IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~~g~------v~~~l~~~pelF~g-~~~~  490 (562)
                      ++||||||+||+++.++                    .++|+|||+++.......      .....|++||.+.+ ....
T Consensus       114 ~~H~dl~p~nili~~~~--------------------~~~l~d~g~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~  173 (250)
T cd05085         114 CIHRDLAARNCLVGENN--------------------VLKISDFGMSRQEDDGIYSSSGLKQIPIKWTAPEALNYGRYSS  173 (250)
T ss_pred             eeecccChheEEEcCCC--------------------eEEECCCccceeccccccccCCCCCCcccccCHHHhccCCCCc
Confidence            99999999999998876                    799999999986543110      11234788998765 3455


Q ss_pred             HHHHHHHhhcccCCCCC-CCCCCChhhhHHHHHHHHhhcccCCCCCCCchhHHHHHHHHHHHhcCCCcCcCC
Q psy9184         491 QFDMYRMMRKQCQNNWQ-NFTPKNNVFWIHYLVDKATCLKKGYQYLRAPRHQAFELLEELGQNALHFDSCYE  561 (562)
Q Consensus       491 q~dIy~lm~~~~~~~W~-~~~P~tn~~wl~yl~~~Ll~~~~~~~~~~~~~~~~~~~l~~l~~~~l~~~s~~~  561 (562)
                      +.|||++.-... ..|. +..|+.... .......... ......+.    .....+..+..+++..+...|
T Consensus       174 ~~Di~slG~ll~-~~~~~g~~p~~~~~-~~~~~~~~~~-~~~~~~~~----~~~~~~~~li~~~l~~~p~~R  238 (250)
T cd05085         174 ESDVWSYGILLW-ETFSLGVCPYPGMT-NQQAREQVEK-GYRMSCPQ----KCPDDVYKVMQRCWDYKPENR  238 (250)
T ss_pred             hhHHHHHHHHHH-HHhcCCCCCCCCCC-HHHHHHHHHc-CCCCCCCC----CCCHHHHHHHHHHcccCcccC
Confidence            689998643332 3333 455553221 1122222222 11111111    113467778888888777665

Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c

>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2

Probab=99.89  E-value=1.7e-22  Score=207.04  Aligned_cols=184  Identities=21%  Similarity=0.307  Sum_probs=146.7

Q ss_pred             CCCCceeeeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCcccc
Q psy9184         260 SSALKNCKKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTE  333 (562)
Q Consensus       260 ~~~y~~~~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~  333 (562)
                      ..+|+..+.||.|+||.||+|      +.||+|.+....        ....+.+.+|+.+++.++|              
T Consensus        18 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~--------~~~~~~~~~e~~~l~~l~h--------------   75 (296)
T cd06655          18 KKKYTRYEKIGQGASGTVFTAIDVATGQEVAIKQINLQK--------QPKKELIINEILVMKELKN--------------   75 (296)
T ss_pred             cceEEEEEEEecCCCeEEEEEEEcCCCcEEEEEEEeccc--------CchHHHHHHHHHHHHhcCC--------------
Confidence            357999999999999999998      789999987543        2223567899999999998              


Q ss_pred             cccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc--cCCHHHHHHHHHHHHHHHHH
Q psy9184         334 LLKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK--YRSPNQTYAMILQVVFSLAV  411 (562)
Q Consensus       334 l~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~--~l~e~~i~~I~~QIl~aL~y  411 (562)
                                  ||++++++.+..             ++.+|+||||+++|++...+.  .+++.++..++.|++.||+|
T Consensus        76 ------------~~iv~~~~~~~~-------------~~~~~lv~e~~~~~~L~~~~~~~~l~~~~~~~i~~~l~~al~~  130 (296)
T cd06655          76 ------------PNIVNFLDSFLV-------------GDELFVVMEYLAGGSLTDVVTETCMDEAQIAAVCRECLQALEF  130 (296)
T ss_pred             ------------CceeeeeeeEec-------------CceEEEEEEecCCCcHHHHHHhcCCCHHHHHHHHHHHHHHHHH
Confidence                        999999998865             558999999999987766554  38999999999999999999


Q ss_pred             HHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecCC-----cEEEeecCCCccccCC
Q psy9184         412 AEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVGE-----KICYYDLSQDEELFEG  486 (562)
Q Consensus       412 LH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~~-----g~v~~~l~~~pelF~g  486 (562)
                      ||+ .||+||||||+||+++.++                    .++|+|||++......     ....+..|++||.+.+
T Consensus       131 LH~-~~i~H~dL~p~Nili~~~~--------------------~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~  189 (296)
T cd06655         131 LHA-NQVIHRDIKSDNVLLGMDG--------------------SVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTR  189 (296)
T ss_pred             HHH-CCcccCCCCHHHEEECCCC--------------------CEEEccCccchhcccccccCCCcCCCccccCcchhcC
Confidence            999 7999999999999998876                    7999999998865432     1234556889998776


Q ss_pred             C-CCcHHHHHHHhhcccCCCCCCCCCC
Q psy9184         487 E-GDYQFDMYRMMRKQCQNNWQNFTPK  512 (562)
Q Consensus       487 ~-~~~q~dIy~lm~~~~~~~W~~~~P~  512 (562)
                      . .....|+|++ |......+.+..|+
T Consensus       190 ~~~~~~~Dv~sl-Gvil~~lltg~~pf  215 (296)
T cd06655         190 KAYGPKVDIWSL-GIMAIEMVEGEPPY  215 (296)
T ss_pred             CCCCchhhHHHH-HHHHHHHHhCCCCC
Confidence            4 4566899875 33333344444554

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C

Probab=99.89  E-value=1.9e-22  Score=205.38  Aligned_cols=169  Identities=18%  Similarity=0.186  Sum_probs=137.0

Q ss_pred             CCCceeeeeeccCceEEEEE-----------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCC
Q psy9184         261 SALKNCKKIGEGVYGEVFKL-----------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTP  329 (562)
Q Consensus       261 ~~y~~~~~LG~GsfG~Vyka-----------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p  329 (562)
                      .+|.+.+.||+|+||.||+|           ..+|+|.+....        ....+.+.+|+.+++.++|          
T Consensus         5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~--------~~~~~~~~~e~~~l~~l~h----------   66 (291)
T cd05094           5 RDIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPT--------LAARKDFQREAELLTNLQH----------   66 (291)
T ss_pred             HHeEEeeeecccCCCeEEEeEeeccCCCCcceeeEEEecCCcc--------HHHHHHHHHHHHHHhcCCC----------
Confidence            56888999999999999998           248888876432        3334578899999999998          


Q ss_pred             cccccccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc------------------
Q psy9184         330 CFTELLKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK------------------  391 (562)
Q Consensus       330 ~fv~l~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~------------------  391 (562)
                                      |||+++++.+..             .+..++||||+++|++.+.+.                  
T Consensus        67 ----------------~~i~~~~~~~~~-------------~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~  117 (291)
T cd05094          67 ----------------EHIVKFYGVCGD-------------GDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAK  117 (291)
T ss_pred             ----------------CCcceEEEEEcc-------------CCceEEEEecCCCCcHHHHHHhcCcccccccccccccCc
Confidence                            999999988864             557999999999997765542                  


Q ss_pred             -cCCHHHHHHHHHHHHHHHHHHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecC-
Q psy9184         392 -YRSPNQTYAMILQVVFSLAVAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVG-  469 (562)
Q Consensus       392 -~l~e~~i~~I~~QIl~aL~yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~-  469 (562)
                       .+++..++.++.||+.||+|||+ .+|+||||||+|||++.++                    .++|+|||+++.... 
T Consensus       118 ~~~~~~~~~~i~~~i~~al~~lH~-~~i~H~dlkp~Nil~~~~~--------------------~~~l~dfg~a~~~~~~  176 (291)
T cd05094         118 GELGLSQMLHIASQIASGMVYLAS-QHFVHRDLATRNCLVGANL--------------------LVKIGDFGMSRDVYST  176 (291)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHh-CCeeecccCcceEEEccCC--------------------cEEECCCCcccccCCC
Confidence             26889999999999999999999 7999999999999999876                    799999999976543 


Q ss_pred             ------CcEEEeecCCCccccCCC-CCcHHHHHHH
Q psy9184         470 ------EKICYYDLSQDEELFEGE-GDYQFDMYRM  497 (562)
Q Consensus       470 ------~g~v~~~l~~~pelF~g~-~~~q~dIy~l  497 (562)
                            ........|++||.+.+. ...+.|||++
T Consensus       177 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~sl  211 (291)
T cd05094         177 DYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSF  211 (291)
T ss_pred             ceeecCCCCCcceeecChHHhccCCCCchhhHHHH
Confidence                  122334568899987763 4556899875

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n

>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins

Probab=99.89  E-value=1.9e-22  Score=207.20  Aligned_cols=174  Identities=20%  Similarity=0.286  Sum_probs=140.6

Q ss_pred             CCCCCceeeeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCccc
Q psy9184         259 PSSALKNCKKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFT  332 (562)
Q Consensus       259 ~~~~y~~~~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv  332 (562)
                      +...|...+.||+|+||.||+|      +.||+|++....     .........+.+|+.+++.++|             
T Consensus        13 ~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~-----~~~~~~~~~~~~Ei~~l~~l~h-------------   74 (307)
T cd06607          13 PEKLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSG-----KQSNEKWQDIIKEVRFLQQLRH-------------   74 (307)
T ss_pred             cchhhhhheeecCCCCeEEEEEEEcCCCcEEEEEEEeccc-----cCcHHHHHHHHHHHHHHHhCCC-------------
Confidence            4567899999999999999999      789999987543     2234445678899999999998             


Q ss_pred             ccccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCcccc----ccCCHHHHHHHHHHHHHH
Q psy9184         333 ELLKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDI----KYRSPNQTYAMILQVVFS  408 (562)
Q Consensus       333 ~l~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l----~~l~e~~i~~I~~QIl~a  408 (562)
                                   |||+++.+.+.+             ++..|+||||+.| .+.+.+    ..+++..+..++.||+.|
T Consensus        75 -------------~niv~~~~~~~~-------------~~~~~lv~e~~~g-~l~~~~~~~~~~l~~~~~~~~~~ql~~~  127 (307)
T cd06607          75 -------------PNTIEYKGCYLR-------------EHTAWLVMEYCLG-SASDILEVHKKPLQEVEIAAICHGALQG  127 (307)
T ss_pred             -------------CCEEEEEEEEEe-------------CCeEEEEHHhhCC-CHHHHHHHcccCCCHHHHHHHHHHHHHH
Confidence                         999999998875             5588999999984 454433    248899999999999999


Q ss_pred             HHHHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecC-CcEEEeecCCCccccCC-
Q psy9184         409 LAVAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVG-EKICYYDLSQDEELFEG-  486 (562)
Q Consensus       409 L~yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~-~g~v~~~l~~~pelF~g-  486 (562)
                      |.|||+ .+|+||||+|+||+++.++                    .++|+|||+++.... .....+..|++||.+.+ 
T Consensus       128 L~~LH~-~~i~H~dl~p~nIl~~~~~--------------------~~kL~dfg~~~~~~~~~~~~~~~~y~aPE~~~~~  186 (307)
T cd06607         128 LAYLHS-HERIHRDIKAGNILLTEPG--------------------TVKLADFGSASLVSPANSFVGTPYWMAPEVILAM  186 (307)
T ss_pred             HHHHHH-CCceecCCCcccEEECCCC--------------------CEEEeecCcceecCCCCCccCCccccCceeeecc
Confidence            999999 7999999999999999886                    799999999987653 23344567889998742 


Q ss_pred             ---CCCcHHHHHHHh
Q psy9184         487 ---EGDYQFDMYRMM  498 (562)
Q Consensus       487 ---~~~~q~dIy~lm  498 (562)
                         ..+...|||+..
T Consensus       187 ~~~~~~~~sDv~s~G  201 (307)
T cd06607         187 DEGQYDGKVDVWSLG  201 (307)
T ss_pred             CCCCCCcccchHHHH
Confidence               344568888753

Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily

>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase

Probab=99.89  E-value=9.8e-23  Score=205.43  Aligned_cols=170  Identities=22%  Similarity=0.271  Sum_probs=140.7

Q ss_pred             CCceeeeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCcccccc
Q psy9184         262 ALKNCKKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTELL  335 (562)
Q Consensus       262 ~y~~~~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~l~  335 (562)
                      +|++.+.||+|+||.||+|      ..||+|++.....      .......+.+|+.+++.++|                
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~vK~~~~~~~------~~~~~~~~~~e~~~l~~~~~----------------   58 (286)
T cd07832           1 RYKILGRIGEGAHGIVFKAKDRETGETVALKKVALRRL------EGGIPNQALREIKALQACQH----------------   58 (286)
T ss_pred             CceEEeecccCCCcEEEEEEECCCCceEEEEEEEcccc------cchhhHHHHHHHHHHHhCCC----------------
Confidence            4788999999999999999      7899999986531      12334678899999999998                


Q ss_pred             cccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc----cCCHHHHHHHHHHHHHHHHH
Q psy9184         336 KCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK----YRSPNQTYAMILQVVFSLAV  411 (562)
Q Consensus       336 ~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~----~l~e~~i~~I~~QIl~aL~y  411 (562)
                                |||+++++++..             +...|+||||+ ++++.+.+.    .+++.+++.++.||+.||.|
T Consensus        59 ----------~~i~~~~~~~~~-------------~~~~~~v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~  114 (286)
T cd07832          59 ----------PYVVKLLDVFPH-------------GSGFVLVMEYM-PSDLSEVLRDEERPLPEAQVKSYMRMLLKGVAY  114 (286)
T ss_pred             ----------CCCcceeeEEec-------------CCeeEEEeccc-CCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHH
Confidence                      999999998875             55899999999 887766553    38899999999999999999


Q ss_pred             HHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecCCc------EEEeecCCCccccC
Q psy9184         412 AEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVGEK------ICYYDLSQDEELFE  485 (562)
Q Consensus       412 LH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~~g------~v~~~l~~~pelF~  485 (562)
                      ||+ .+|+|+||||+||+++.++                    .++|+|||+++.....+      ...+..|++||.+.
T Consensus       115 lH~-~~i~H~dl~p~ni~~~~~~--------------------~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~  173 (286)
T cd07832         115 MHA-NGIMHRDLKPANLLISADG--------------------VLKIADFGLARLFSEEEPRLYSHQVATRWYRAPELLY  173 (286)
T ss_pred             HHH-CCeecCCcCHHHEEEcCCC--------------------cEEEeeeeecccccCCCCCccccccCcccccCceeee
Confidence            999 7999999999999999876                    79999999998765422      33455688999886


Q ss_pred             CC--CCcHHHHHHHh
Q psy9184         486 GE--GDYQFDMYRMM  498 (562)
Q Consensus       486 g~--~~~q~dIy~lm  498 (562)
                      +.  ...+.|||++.
T Consensus       174 ~~~~~~~~~Di~slG  188 (286)
T cd07832         174 GARKYDPGVDLWAVG  188 (286)
T ss_pred             ccccCCchhHHHHHH
Confidence            53  35669998864

Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea

>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases

Probab=99.89  E-value=3.1e-22  Score=202.12  Aligned_cols=172  Identities=21%  Similarity=0.204  Sum_probs=138.8

Q ss_pred             CCCCCceeeeeeccCceEEEEE----------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCC
Q psy9184         259 PSSALKNCKKIGEGVYGEVFKL----------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENST  328 (562)
Q Consensus       259 ~~~~y~~~~~LG~GsfG~Vyka----------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~  328 (562)
                      ...+|++.+.||+|+||.||+|          ..+|+|.+....       .......+.+|+.+++.++|         
T Consensus         5 ~~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~aik~~~~~~-------~~~~~~~~~~e~~~l~~l~h---------   68 (279)
T cd05057           5 KETELEKIKVLGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREET-------SPKANKEILDEAYVMASVDH---------   68 (279)
T ss_pred             CHHHcEEcceecCCCCccEEEEEEecCCCCcceEEEEEeccCCC-------CHHHHHHHHHHHHHHHhCCC---------
Confidence            4577899999999999999998          258999887553       13445678899999999998         


Q ss_pred             CcccccccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc----cCCHHHHHHHHHH
Q psy9184         329 PCFTELLKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK----YRSPNQTYAMILQ  404 (562)
Q Consensus       329 p~fv~l~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~----~l~e~~i~~I~~Q  404 (562)
                                       |||+++++.+..              ...++||||+.+|++.+.+.    .+++..+..++.|
T Consensus        69 -----------------~~i~~~~~~~~~--------------~~~~~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~q  117 (279)
T cd05057          69 -----------------PHVVRLLGICLS--------------SQVQLITQLMPLGCLLDYVRNHKDNIGSQYLLNWCVQ  117 (279)
T ss_pred             -----------------CCcceEEEEEec--------------CceEEEEecCCCCcHHHHHHhccCCCCHHHHHHHHHH
Confidence                             999999887752              47899999999998877664    3789999999999


Q ss_pred             HHHHHHHHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecCCc-------EEEeec
Q psy9184         405 VVFSLAVAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVGEK-------ICYYDL  477 (562)
Q Consensus       405 Il~aL~yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~~g-------~v~~~l  477 (562)
                      |+.||+|||+ ++|+||||||+|||++.++                    .++|+|||+++......       ......
T Consensus       118 i~~~l~~LH~-~~i~H~di~p~nil~~~~~--------------------~~kL~dfg~~~~~~~~~~~~~~~~~~~~~~  176 (279)
T cd05057         118 IAKGMSYLEE-KRLVHRDLAARNVLVKTPQ--------------------HVKITDFGLAKLLDVDEKEYHAEGGKVPIK  176 (279)
T ss_pred             HHHHHHHHHh-CCEEecccCcceEEEcCCC--------------------eEEECCCcccccccCcccceecCCCccccc
Confidence            9999999999 7999999999999998776                    79999999998765321       111235


Q ss_pred             CCCccccCC-CCCcHHHHHHHh
Q psy9184         478 SQDEELFEG-EGDYQFDMYRMM  498 (562)
Q Consensus       478 ~~~pelF~g-~~~~q~dIy~lm  498 (562)
                      |++||.+.+ ..+...|+|+..
T Consensus       177 y~~PE~~~~~~~~~~~Di~slG  198 (279)
T cd05057         177 WMALESILHRIYTHKSDVWSYG  198 (279)
T ss_pred             ccCHHHhhcCCcCchhhHHHHH
Confidence            788887754 445568888854

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea

>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2

Probab=99.89  E-value=6.5e-23  Score=207.21  Aligned_cols=172  Identities=18%  Similarity=0.181  Sum_probs=136.6

Q ss_pred             CCCceeeeeeccCceEEEEE-----------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCC
Q psy9184         261 SALKNCKKIGEGVYGEVFKL-----------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTP  329 (562)
Q Consensus       261 ~~y~~~~~LG~GsfG~Vyka-----------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p  329 (562)
                      .+|.+.+.||+|+||.||+|           ..||+|++....       .....+.+..|+.++..++|          
T Consensus         5 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vaiK~~~~~~-------~~~~~~~~~~e~~~~~~l~h----------   67 (283)
T cd05091           5 STVRFMEELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKA-------EGPLREEFKHEAMMRSRLQH----------   67 (283)
T ss_pred             HHHHHHHHhCCCCCCeEEEEEEecCCCCCceeEEEEEEccCCC-------CHHHHHHHHHHHHHHhcCCC----------
Confidence            45788899999999999998           469999987542       12334668899999999998          


Q ss_pred             cccccccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc------------------
Q psy9184         330 CFTELLKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK------------------  391 (562)
Q Consensus       330 ~fv~l~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~------------------  391 (562)
                                      |||+++++.+..             .+..++++||+.++++...+.                  
T Consensus        68 ----------------~~iv~~~~~~~~-------------~~~~~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~  118 (283)
T cd05091          68 ----------------PNIVCLLGVVTK-------------EQPLSMIFSYCSHSDLHEFLVMRSPHSDVGSTDDDKTVK  118 (283)
T ss_pred             ----------------CCcCeEEEEEcC-------------CCceEEEEEcCCCCcHHHHHHhcCCCccccccccccccc
Confidence                            999999988865             457899999999887655441                  


Q ss_pred             -cCCHHHHHHHHHHHHHHHHHHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecCC
Q psy9184         392 -YRSPNQTYAMILQVVFSLAVAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVGE  470 (562)
Q Consensus       392 -~l~e~~i~~I~~QIl~aL~yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~~  470 (562)
                       .+++..+..++.|++.||.|||+ .||+||||||+|||++.++                    .+||+|||+++.....
T Consensus       119 ~~~~~~~~~~~~~ql~~aL~~lH~-~gi~H~dlkp~Nil~~~~~--------------------~~kl~Dfg~~~~~~~~  177 (283)
T cd05091         119 STLEPADFVHIVTQIAAGMEFLSS-HHVVHKDLATRNVLVFDKL--------------------NVKISDLGLFREVYAA  177 (283)
T ss_pred             cccCHHHHHHHHHHHHHHHHHHHH-cCccccccchhheEecCCC--------------------ceEecccccccccccc
Confidence             26788899999999999999999 7999999999999998775                    6999999998865431


Q ss_pred             -------cEEEeecCCCccccCC-CCCcHHHHHHHhh
Q psy9184         471 -------KICYYDLSQDEELFEG-EGDYQFDMYRMMR  499 (562)
Q Consensus       471 -------g~v~~~l~~~pelF~g-~~~~q~dIy~lm~  499 (562)
                             ....+..|++||.+.+ ......|||++.-
T Consensus       178 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~  214 (283)
T cd05091         178 DYYKLMGNSLLPIRWMSPEAIMYGKFSIDSDIWSYGV  214 (283)
T ss_pred             hheeeccCccCCccccCHHHHhcCCCCcchhHHHHHH
Confidence                   1122346889997654 4556689988643

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases

Probab=99.89  E-value=2e-22  Score=201.46  Aligned_cols=233  Identities=15%  Similarity=0.150  Sum_probs=163.2

Q ss_pred             CCceeeeeeccCceEEEEE------eeEEEEEeecCCCCCC-cchhHHHHHHHHHHHHHHHhcCCccccCCCCCCccccc
Q psy9184         262 ALKNCKKIGEGVYGEVFKL------NNSVIKIMPIEGDQSV-NGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTEL  334 (562)
Q Consensus       262 ~y~~~~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~-~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~l  334 (562)
                      +|.+...||+|+||.||+|      ..+|+|.+........ ........+.+.+|+.+++.++|               
T Consensus         1 ~~~~~~~ig~g~~~~v~~a~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h---------------   65 (267)
T cd06628           1 KWIKGALIGSGSFGSVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKELQH---------------   65 (267)
T ss_pred             CccccceeecCCCeEEEEEEecCCCcEEEEEEecCCCcccchhHHHHHHHHHHHHHHHHHHhcCC---------------
Confidence            3677899999999999999      7899999876532111 01122344678899999999998               


Q ss_pred             ccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc---cCCHHHHHHHHHHHHHHHHH
Q psy9184         335 LKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK---YRSPNQTYAMILQVVFSLAV  411 (562)
Q Consensus       335 ~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~---~l~e~~i~~I~~QIl~aL~y  411 (562)
                                 |||+++++.+..             .+..++||||++++++...+.   .+++..+..++.|++.||.|
T Consensus        66 -----------~~i~~~~~~~~~-------------~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~~l~~~l~~  121 (267)
T cd06628          66 -----------ENIVQYLGSSLD-------------ADHLNIFLEYVPGGSVAALLNNYGAFEETLVRNFVRQILKGLNY  121 (267)
T ss_pred             -----------CCeeeEEEEEEe-------------CCccEEEEEecCCCCHHHHHHhccCccHHHHHHHHHHHHHHHHH
Confidence                       999999988765             558899999999887765553   47899999999999999999


Q ss_pred             HHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecCCc-----------EEEeecCCC
Q psy9184         412 AEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVGEK-----------ICYYDLSQD  480 (562)
Q Consensus       412 LH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~~g-----------~v~~~l~~~  480 (562)
                      ||+ .|++||||+|+||+++.++                    .++|+|||+++......           ...+..|++
T Consensus       122 lH~-~~ivH~di~p~nil~~~~~--------------------~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~y~~  180 (267)
T cd06628         122 LHN-RGIIHRDIKGANILVDNKG--------------------GIKISDFGISKKLEANSLSTKTNGARPSLQGSVFWMA  180 (267)
T ss_pred             HHh-cCcccccCCHHHEEEcCCC--------------------CEEecccCCCcccccccccCCccccccccCCCcCccC
Confidence            999 7999999999999998876                    79999999998775211           123456788


Q ss_pred             ccccCCC-CCcHHHHHHHhhcccCCCCCCCCCCChhhhHHHHHHHHhhcccCCCCCCCchhHHHHHHHHHHHhcCCCcCc
Q psy9184         481 EELFEGE-GDYQFDMYRMMRKQCQNNWQNFTPKNNVFWIHYLVDKATCLKKGYQYLRAPRHQAFELLEELGQNALHFDSC  559 (562)
Q Consensus       481 pelF~g~-~~~q~dIy~lm~~~~~~~W~~~~P~tn~~wl~yl~~~Ll~~~~~~~~~~~~~~~~~~~l~~l~~~~l~~~s~  559 (562)
                      ||.+.+. .+...|+|++. ......+.+..|+....-..-+ ..... . ..+...   ......+..|.+.+|+.+..
T Consensus       181 pe~~~~~~~~~~~Dv~slG-~il~~l~~g~~p~~~~~~~~~~-~~~~~-~-~~~~~~---~~~~~~~~~li~~~l~~~p~  253 (267)
T cd06628         181 PEVVKQTSYTRKADIWSLG-CLVVEMLTGKHPFPDCTQLQAI-FKIGE-N-ASPEIP---SNISSEAIDFLEKTFEIDHN  253 (267)
T ss_pred             hhHhccCCCCchhhhHHHH-HHHHHHhhCCCCCCCccHHHHH-HHHhc-c-CCCcCC---cccCHHHHHHHHHHccCCch
Confidence            8877663 44568888753 3333444555565432212111 11111 0 111110   11235677788888887766


Q ss_pred             CC
Q psy9184         560 YE  561 (562)
Q Consensus       560 ~~  561 (562)
                      .|
T Consensus       254 ~R  255 (267)
T cd06628         254 KR  255 (267)
T ss_pred             hC
Confidence            54

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate

>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6

Probab=99.89  E-value=1.3e-22  Score=208.45  Aligned_cols=168  Identities=20%  Similarity=0.286  Sum_probs=131.1

Q ss_pred             eeeeeccCceEEEEE--------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCcccccccc
Q psy9184         266 CKKIGEGVYGEVFKL--------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTELLKC  337 (562)
Q Consensus       266 ~~~LG~GsfG~Vyka--------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~l~~~  337 (562)
                      ..+||+|+||.||+|        ..||+|.+....          ....+.+|+.+++.++|                  
T Consensus         6 g~~lG~G~~g~Vy~~~~~~~~~~~~~a~k~~~~~~----------~~~~~~~E~~~l~~l~h------------------   57 (317)
T cd07867           6 GCKVGRGTYGHVYKAKRKDGKDEKEYALKQIEGTG----------ISMSACREIALLRELKH------------------   57 (317)
T ss_pred             ceEeccCCCeeEEEEEecCCCccceEEEEEecCCC----------CcHHHHHHHHHHHhCCC------------------
Confidence            478999999999999        479999887542          11346789999999998                  


Q ss_pred             cccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCcccc------------ccCCHHHHHHHHHHH
Q psy9184         338 SCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDI------------KYRSPNQTYAMILQV  405 (562)
Q Consensus       338 ~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l------------~~l~e~~i~~I~~QI  405 (562)
                              |||+++++++...           .+..+|+||||+.+ ++++.+            ..+++..++.++.||
T Consensus        58 --------~niv~~~~~~~~~-----------~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi  117 (317)
T cd07867          58 --------PNVIALQKVFLSH-----------SDRKVWLLFDYAEH-DLWHIIKFHRASKANKKPMQLPRSMVKSLLYQI  117 (317)
T ss_pred             --------CCeeeEEEEEecc-----------CCCeEEEEEeeeCC-cHHHHHHhhhccccCCCCccCCHHHHHHHHHHH
Confidence                    9999999887542           24578999999975 343332            137889999999999


Q ss_pred             HHHHHHHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecC--------CcEEEeec
Q psy9184         406 VFSLAVAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVG--------EKICYYDL  477 (562)
Q Consensus       406 l~aL~yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~--------~g~v~~~l  477 (562)
                      +.||.|||+ .+|+||||||+|||+...+...                ..+||+|||+|+....        .+.+++..
T Consensus       118 ~~aL~~lH~-~~ivH~Dlkp~Nil~~~~~~~~----------------~~~kl~DfG~a~~~~~~~~~~~~~~~~~~t~~  180 (317)
T cd07867         118 LDGIHYLHA-NWVLHRDLKPANILVMGEGPER----------------GRVKIADMGFARLFNSPLKPLADLDPVVVTFW  180 (317)
T ss_pred             HHHHHHHHh-CCEEcCCCCHHHEEEccCCCCC----------------CcEEEeeccceeccCCCcccccccCcceeccc
Confidence            999999999 7999999999999996442110                1799999999987643        23466778


Q ss_pred             CCCccccCCC--CCcHHHHHHHh
Q psy9184         478 SQDEELFEGE--GDYQFDMYRMM  498 (562)
Q Consensus       478 ~~~pelF~g~--~~~q~dIy~lm  498 (562)
                      |++||++.+.  .....|||++.
T Consensus       181 y~aPE~~~~~~~~~~~~DiwSlG  203 (317)
T cd07867         181 YRAPELLLGARHYTKAIDIWAIG  203 (317)
T ss_pred             ccCcHHhcCCCccCcHHHHHhHH
Confidence            9999998764  35568999864

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as

>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta

Probab=99.89  E-value=1e-22  Score=218.91  Aligned_cols=172  Identities=19%  Similarity=0.208  Sum_probs=135.9

Q ss_pred             CCCCceeeeeeccCceEEEEE-----------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCC
Q psy9184         260 SSALKNCKKIGEGVYGEVFKL-----------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENST  328 (562)
Q Consensus       260 ~~~y~~~~~LG~GsfG~Vyka-----------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~  328 (562)
                      .++|.+.++||+|+||.||+|           ..||+|+++...       .....+.+.+|+.++..+..         
T Consensus        36 ~~~~~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~-------~~~~~~~~~~E~~~l~~l~~---------   99 (401)
T cd05107          36 RDNLVLGRTLGSGAFGRVVEATAHGLSHSQSTMKVAVKMLKSTA-------RSSEKQALMSELKIMSHLGP---------   99 (401)
T ss_pred             HHHeehhhhccCCCceeEEEEEEcCCCCCCCceEEEEEecCCCC-------ChhHHHHHHHHHHHHHhcCC---------
Confidence            356788899999999999998           369999998643       12233568899999999983         


Q ss_pred             CcccccccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc-----------------
Q psy9184         329 PCFTELLKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK-----------------  391 (562)
Q Consensus       329 p~fv~l~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~-----------------  391 (562)
                                      ||||+++++.+..             .+.+|+|||||.+|++.+.+.                 
T Consensus       100 ----------------H~niv~~~~~~~~-------------~~~~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~  150 (401)
T cd05107         100 ----------------HLNIVNLLGACTK-------------GGPIYIITEYCRYGDLVDYLHRNKHTFLQYYLDKNRDD  150 (401)
T ss_pred             ----------------CCCeEEEEEEEcc-------------CCCcEEEEeccCCCcHHHHHHhccccchhhhccccccc
Confidence                            3999999988875             457999999999998755441                 


Q ss_pred             --------------------------------------------------------------------------------
Q psy9184         392 --------------------------------------------------------------------------------  391 (562)
Q Consensus       392 --------------------------------------------------------------------------------  391 (562)
                                                                                                      
T Consensus       151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  230 (401)
T cd05107         151 GSLISGGSTPLSQRKSHVSLGSESDGGYMDMSKDESADYVPMQDMKGTVKYADIESSNYESPYDQYLPSAPERTRRDTLI  230 (401)
T ss_pred             ccccccccccccccccchhhhhccCccccccCCccccCccchhcchhhhhhhhhhccCcCCchhhhhcccCCCcchhhhh
Confidence                                                                                            


Q ss_pred             ----cCCHHHHHHHHHHHHHHHHHHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeee
Q psy9184         392 ----YRSPNQTYAMILQVVFSLAVAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCF  467 (562)
Q Consensus       392 ----~l~e~~i~~I~~QIl~aL~yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~  467 (562)
                          .+++..+..++.||+.||.|||+ .+|+||||||+|||++..+                    .++|+|||+++..
T Consensus       231 ~~~~~l~~~~~~~~~~qi~~aL~~LH~-~~ivHrdlkp~NiLl~~~~--------------------~~kL~DfGla~~~  289 (401)
T cd05107         231 NESPALSYMDLVGFSYQVANGMEFLAS-KNCVHRDLAARNVLICEGK--------------------LVKICDFGLARDI  289 (401)
T ss_pred             cCCCCCCHHHHHHHHHHHHHHHHHHhc-CCcCcccCCcceEEEeCCC--------------------EEEEEecCcceec
Confidence                14566788899999999999999 7999999999999998865                    7999999999865


Q ss_pred             cCC-------cEEEeecCCCccccCC-CCCcHHHHHHH
Q psy9184         468 VGE-------KICYYDLSQDEELFEG-EGDYQFDMYRM  497 (562)
Q Consensus       468 ~~~-------g~v~~~l~~~pelF~g-~~~~q~dIy~l  497 (562)
                      ...       ....+..|++||.+.+ ......|||+.
T Consensus       290 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dvwsl  327 (401)
T cd05107         290 MRDSNYISKGSTFLPLKWMAPESIFNNLYTTLSDVWSF  327 (401)
T ss_pred             ccccccccCCCcCCCCceeChHHhcCCCCCcHhHHHHH
Confidence            321       1223445788987765 34556899875

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D

>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5

Probab=99.89  E-value=8.7e-23  Score=208.81  Aligned_cols=183  Identities=17%  Similarity=0.284  Sum_probs=143.7

Q ss_pred             CCCceeeeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCccccc
Q psy9184         261 SALKNCKKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTEL  334 (562)
Q Consensus       261 ~~y~~~~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~l  334 (562)
                      +.|.....||+|+||.||++      ..||||.+....        ....+.+.+|+.+++.++|               
T Consensus        22 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~--------~~~~~~~~~e~~~l~~l~h---------------   78 (292)
T cd06658          22 EYLDSFIKIGEGSTGIVCIATEKHTGKQVAVKKMDLRK--------QQRRELLFNEVVIMRDYHH---------------   78 (292)
T ss_pred             HHHhhhhcccCCCCeEEEEEEECCCCCEEEEEEEecch--------HHHHHHHHHHHHHHHhCCC---------------
Confidence            34556688999999999999      789999987542        3344678899999999998               


Q ss_pred             ccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc--cCCHHHHHHHHHHHHHHHHHH
Q psy9184         335 LKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK--YRSPNQTYAMILQVVFSLAVA  412 (562)
Q Consensus       335 ~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~--~l~e~~i~~I~~QIl~aL~yL  412 (562)
                                 |||+++++.|..             ++..|+||||++++++.+.+.  .+++.++..++.||+.||.||
T Consensus        79 -----------~~ii~~~~~~~~-------------~~~~~lv~e~~~~~~L~~~~~~~~l~~~~~~~~~~qi~~~l~~L  134 (292)
T cd06658          79 -----------ENVVDMYNSYLV-------------GDELWVVMEFLEGGALTDIVTHTRMNEEQIATVCLSVLRALSYL  134 (292)
T ss_pred             -----------CcHHHHHHheec-------------CCeEEEEEeCCCCCcHHHHHhcCCCCHHHHHHHHHHHHHHHHHH
Confidence                       999999998865             568999999999887655442  478999999999999999999


Q ss_pred             HhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecC-----CcEEEeecCCCccccCC-
Q psy9184         413 EVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVG-----EKICYYDLSQDEELFEG-  486 (562)
Q Consensus       413 H~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~-----~g~v~~~l~~~pelF~g-  486 (562)
                      |+ .+|+||||||+||+++.++                    .++|+|||++.....     .....+..|++||.+.+ 
T Consensus       135 H~-~~ivH~dlkp~Nill~~~~--------------------~~kL~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~  193 (292)
T cd06658         135 HN-QGVIHRDIKSDSILLTSDG--------------------RIKLSDFGFCAQVSKEVPKRKSLVGTPYWMAPEVISRL  193 (292)
T ss_pred             HH-CCEeecCCCHHHEEEcCCC--------------------CEEEccCcchhhcccccccCceeecCccccCHHHHccC
Confidence            99 7999999999999998876                    799999999875432     22345667899998876 


Q ss_pred             CCCcHHHHHHHhhcccCCCCCCCCCC
Q psy9184         487 EGDYQFDMYRMMRKQCQNNWQNFTPK  512 (562)
Q Consensus       487 ~~~~q~dIy~lm~~~~~~~W~~~~P~  512 (562)
                      ..+...|+|+..-... ....+..|+
T Consensus       194 ~~~~~~Dv~slGvil~-el~~g~~p~  218 (292)
T cd06658         194 PYGTEVDIWSLGIMVI-EMIDGEPPY  218 (292)
T ss_pred             CCCchhhHHHHHHHHH-HHHhCCCCC
Confidence            3455689988643332 233344444

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express

>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases

Probab=99.89  E-value=1.9e-22  Score=201.05  Aligned_cols=177  Identities=21%  Similarity=0.232  Sum_probs=138.5

Q ss_pred             eeeeccCceEEEEE---------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCcccccccc
Q psy9184         267 KKIGEGVYGEVFKL---------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTELLKC  337 (562)
Q Consensus       267 ~~LG~GsfG~Vyka---------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~l~~~  337 (562)
                      ++||+|+||.||+|         ..+|+|.+....       .....+.+.+|+.+++.++|                  
T Consensus         1 ~~ig~G~~g~v~~~~~~~~~~~~~~~~iK~~~~~~-------~~~~~~~~~~e~~~l~~l~h------------------   55 (257)
T cd05060           1 KELGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEH-------IAAGKKEFLREASVMAQLDH------------------   55 (257)
T ss_pred             CccCccCceeEEEeEeeccCCCcceEEEEeccccc-------chHHHHHHHHHHHHHHhcCC------------------
Confidence            47999999999998         469999988653       11344678899999999998                  


Q ss_pred             cccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc---cCCHHHHHHHHHHHHHHHHHHHh
Q psy9184         338 SCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK---YRSPNQTYAMILQVVFSLAVAEV  414 (562)
Q Consensus       338 ~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~---~l~e~~i~~I~~QIl~aL~yLH~  414 (562)
                              |||+++++++.              .+..++||||+.+|++.+.+.   .+++..+..++.|++.||.|||+
T Consensus        56 --------~~iv~~~~~~~--------------~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lh~  113 (257)
T cd05060          56 --------PCIVRLIGVCK--------------GEPLMLVMELAPLGPLLKYLKKRREIPVSDLKELAHQVAMGMAYLES  113 (257)
T ss_pred             --------CCeeeEEEEEc--------------CCceEEEEEeCCCCcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHhh
Confidence                    99999988764              346799999999998877664   38899999999999999999999


Q ss_pred             hCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecCCcEEE--------eecCCCccccCC
Q psy9184         415 ELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVGEKICY--------YDLSQDEELFEG  486 (562)
Q Consensus       415 ~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~~g~v~--------~~l~~~pelF~g  486 (562)
                       .+|+||||||+|||++.++                    .++|+|||+++........+        +..|.+||.+.+
T Consensus       114 -~~i~H~di~p~nili~~~~--------------------~~kl~df~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~  172 (257)
T cd05060         114 -KHFVHRDLAARNVLLVNRH--------------------QAKISDFGMSRALGAGSDYYRATTAGRWPLKWYAPECINY  172 (257)
T ss_pred             -cCeeccCcccceEEEcCCC--------------------cEEeccccccceeecCCcccccccCccccccccCHHHhcC
Confidence             7999999999999998876                    79999999998775422111        235788998766


Q ss_pred             C-CCcHHHHHHHhhcccCCCCC-CCCCC
Q psy9184         487 E-GDYQFDMYRMMRKQCQNNWQ-NFTPK  512 (562)
Q Consensus       487 ~-~~~q~dIy~lm~~~~~~~W~-~~~P~  512 (562)
                      . .+...|||++ |......|. +..|+
T Consensus       173 ~~~~~~~Di~sl-G~~l~~~~~~g~~p~  199 (257)
T cd05060         173 GKFSSKSDVWSY-GVTLWEAFSYGAKPY  199 (257)
T ss_pred             CCCCccchHHHH-HHHHHHHHcCCCCCc
Confidence            3 4556899875 333334443 45554

Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi

>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase

Probab=99.89  E-value=1.1e-22  Score=206.27  Aligned_cols=173  Identities=21%  Similarity=0.224  Sum_probs=138.5

Q ss_pred             CCCCCceeeeeeccCceEEEEE-----------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCC
Q psy9184         259 PSSALKNCKKIGEGVYGEVFKL-----------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENS  327 (562)
Q Consensus       259 ~~~~y~~~~~LG~GsfG~Vyka-----------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~  327 (562)
                      +.++|+..+.||+|+||.||+|           ..+|+|++....       .......+.+|+.+++.++|        
T Consensus         3 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aiK~~~~~~-------~~~~~~~~~~ei~~l~~l~h--------   67 (288)
T cd05050           3 PRNNIEYVRDIGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEA-------SADMQADFQREAALMAEFDH--------   67 (288)
T ss_pred             ChHhceecccccccccccEEEEEEcccCCCCcceeEEEEecCCCc-------CHHHHHHHHHHHHHHHhcCC--------
Confidence            3467899999999999999997           578999887542       12334568899999999998        


Q ss_pred             CCcccccccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc----------------
Q psy9184         328 TPCFTELLKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK----------------  391 (562)
Q Consensus       328 ~p~fv~l~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~----------------  391 (562)
                                        |||+++++++..             ++..|++|||+++|++.+.+.                
T Consensus        68 ------------------~~iv~~~~~~~~-------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~  116 (288)
T cd05050          68 ------------------PNIVKLLGVCAV-------------GKPMCLLFEYMAYGDLNEFLRHRSPRAQCSLSHSTSS  116 (288)
T ss_pred             ------------------CchheEEEEEcC-------------CCccEEEEecCCCCCHHHHHHHcCccccccccccccc
Confidence                              999999988765             457899999999997765553                


Q ss_pred             ---------cCCHHHHHHHHHHHHHHHHHHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEecc
Q psy9184         392 ---------YRSPNQTYAMILQVVFSLAVAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFT  462 (562)
Q Consensus       392 ---------~l~e~~i~~I~~QIl~aL~yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFG  462 (562)
                               .+++.+++.++.||+.||.|||+ .+++||||||+|||++.++                    .++|+|||
T Consensus       117 ~~~~~~~~~~l~~~~~~~~~~~i~~aL~~lH~-~~i~H~dl~p~nil~~~~~--------------------~~~l~dfg  175 (288)
T cd05050         117 ARKCGLNPLPLSCTEQLCIAKQVAAGMAYLSE-RKFVHRDLATRNCLVGENM--------------------VVKIADFG  175 (288)
T ss_pred             cccccccccccCHHHHHHHHHHHHHHHHHHHh-CCeecccccHhheEecCCC--------------------ceEECccc
Confidence                     25778899999999999999999 7999999999999998876                    79999999


Q ss_pred             ceeeecCC-------cEEEeecCCCccccCC-CCCcHHHHHHHh
Q psy9184         463 ISRCFVGE-------KICYYDLSQDEELFEG-EGDYQFDMYRMM  498 (562)
Q Consensus       463 LSr~~~~~-------g~v~~~l~~~pelF~g-~~~~q~dIy~lm  498 (562)
                      +++.....       .......|++||.+.+ ..+...|+|++.
T Consensus       176 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG  219 (288)
T cd05050         176 LSRNIYSADYYKASENDAIPIRWMPPESIFYNRYTTESDVWAYG  219 (288)
T ss_pred             cceecccCccccccCCCccChhhcCHHHHhcCCCCchhHHHHHH
Confidence            99865432       1122335788997665 455668998864

Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M

>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes

Probab=99.89  E-value=3.1e-22  Score=200.04  Aligned_cols=171  Identities=24%  Similarity=0.279  Sum_probs=137.0

Q ss_pred             CCCCceeeeeeccCceEEEEE-----eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCccccc
Q psy9184         260 SSALKNCKKIGEGVYGEVFKL-----NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTEL  334 (562)
Q Consensus       260 ~~~y~~~~~LG~GsfG~Vyka-----~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~l  334 (562)
                      .++|.+..+||+|+||.||+|     ..+|+|.+....         ...+.+.+|+.+++.++|               
T Consensus         5 ~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~lK~~~~~~---------~~~~~~~~E~~~l~~l~h---------------   60 (260)
T cd05069           5 RESLRLDVKLGQGCFGEVWMGTWNGTTKVAIKTLKPGT---------MMPEAFLQEAQIMKKLRH---------------   60 (260)
T ss_pred             hHHeeeeeeecCcCCCeEEEEEEcCCceEEEEEcccCC---------ccHHHHHHHHHHHHhCCC---------------
Confidence            467899999999999999999     579999876532         122467889999999998               


Q ss_pred             ccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc-----cCCHHHHHHHHHHHHHHH
Q psy9184         335 LKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK-----YRSPNQTYAMILQVVFSL  409 (562)
Q Consensus       335 ~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~-----~l~e~~i~~I~~QIl~aL  409 (562)
                                 |+++++++++.              .+..|++|||+.+|++.+.+.     .+++..+..++.||+.||
T Consensus        61 -----------~~i~~~~~~~~--------------~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al  115 (260)
T cd05069          61 -----------DKLVPLYAVVS--------------EEPIYIVTEFMGKGSLLDFLKEGDGKYLKLPQLVDMAAQIADGM  115 (260)
T ss_pred             -----------CCeeeEEEEEc--------------CCCcEEEEEcCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHH
Confidence                       99999887764              345799999999998876663     268889999999999999


Q ss_pred             HHHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecCCc------EEEeecCCCccc
Q psy9184         410 AVAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVGEK------ICYYDLSQDEEL  483 (562)
Q Consensus       410 ~yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~~g------~v~~~l~~~pel  483 (562)
                      .|||+ .||+||||||+||+++.++                    .++|+|||+++......      ...+..|++||.
T Consensus       116 ~~lH~-~~i~H~dl~~~Nill~~~~--------------------~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~~Pe~  174 (260)
T cd05069         116 AYIER-MNYIHRDLRAANILVGDNL--------------------VCKIADFGLARLIEDNEYTARQGAKFPIKWTAPEA  174 (260)
T ss_pred             HHHHh-CCEeecccCcceEEEcCCC--------------------eEEECCCccceEccCCcccccCCCccchhhCCHHH
Confidence            99999 7999999999999999876                    79999999998764322      223345788887


Q ss_pred             cCC-CCCcHHHHHHHhhc
Q psy9184         484 FEG-EGDYQFDMYRMMRK  500 (562)
Q Consensus       484 F~g-~~~~q~dIy~lm~~  500 (562)
                      ..+ ..+...|||++.-.
T Consensus       175 ~~~~~~~~~~Di~slG~~  192 (260)
T cd05069         175 ALYGRFTIKSDVWSFGIL  192 (260)
T ss_pred             hccCCcChHHHHHHHHHH
Confidence            654 45667899886433

Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an

>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors

Probab=99.89  E-value=3.1e-22  Score=205.69  Aligned_cols=173  Identities=18%  Similarity=0.242  Sum_probs=139.5

Q ss_pred             CCCCCceeeeeeccCceEEEEE-----------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhc-CCccccCCC
Q psy9184         259 PSSALKNCKKIGEGVYGEVFKL-----------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKET-SDLQYRTEN  326 (562)
Q Consensus       259 ~~~~y~~~~~LG~GsfG~Vyka-----------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L-~h~~~~~~n  326 (562)
                      ..++|.+.+.||+|+||.||+|           ..+|+|++....       .....+.+.+|+.+++++ +|       
T Consensus        33 ~~~~~~~~~~ig~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~-------~~~~~~~~~~E~~~l~~l~~h-------   98 (302)
T cd05055          33 PRNNLSFGKTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTA-------HSSEREALMSELKIMSHLGNH-------   98 (302)
T ss_pred             cHHHeEEcceeeccCCeeEEEEEEecCCCCCceeEEEEEecCccC-------ChHHHHHHHHHHHHHHhccCC-------
Confidence            4467899999999999999988           379999887542       123346788999999999 56       


Q ss_pred             CCCcccccccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCcccccc-----CCHHHHHHH
Q psy9184         327 STPCFTELLKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIKY-----RSPNQTYAM  401 (562)
Q Consensus       327 ~~p~fv~l~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~~-----l~e~~i~~I  401 (562)
                                         |||+++++.+..             .+.+|++|||+.+|++.+.+..     +++.++..+
T Consensus        99 -------------------~~iv~~~~~~~~-------------~~~~~lv~e~~~~~~L~~~i~~~~~~~l~~~~~~~i  146 (302)
T cd05055          99 -------------------ENIVNLLGACTI-------------GGPILVITEYCCYGDLLNFLRRKRESFLTLEDLLSF  146 (302)
T ss_pred             -------------------CCcceEEEEEec-------------CCceEEEEEcCCCCcHHHHHHhCCCCCCCHHHHHHH
Confidence                               999999988865             4578999999999988766532     789999999


Q ss_pred             HHHHHHHHHHHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecCCc-------EEE
Q psy9184         402 ILQVVFSLAVAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVGEK-------ICY  474 (562)
Q Consensus       402 ~~QIl~aL~yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~~g-------~v~  474 (562)
                      +.||+.||.|||+ .+|+||||||+|||++.++                    .++|+|||+++......       ...
T Consensus       147 ~~~i~~~l~~lH~-~~ivH~dlkp~Nil~~~~~--------------------~~~l~dfg~~~~~~~~~~~~~~~~~~~  205 (302)
T cd05055         147 SYQVAKGMAFLAS-KNCIHRDLAARNVLLTHGK--------------------IVKICDFGLARDIMNDSNYVVKGNARL  205 (302)
T ss_pred             HHHHHHHHHHHHH-CCeehhhhccceEEEcCCC--------------------eEEECCCcccccccCCCceeecCCCCc
Confidence            9999999999999 7999999999999998765                    79999999998654322       122


Q ss_pred             eecCCCccccCC-CCCcHHHHHHHh
Q psy9184         475 YDLSQDEELFEG-EGDYQFDMYRMM  498 (562)
Q Consensus       475 ~~l~~~pelF~g-~~~~q~dIy~lm  498 (562)
                      +..|++||.+.+ ......|||++.
T Consensus       206 ~~~y~aPE~~~~~~~~~~~DiwslG  230 (302)
T cd05055         206 PVKWMAPESIFNCVYTFESDVWSYG  230 (302)
T ss_pred             ccccCCHhhhccCCCCcHhHHHHHH
Confidence            345889997655 456668998853

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept

>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2

Probab=99.89  E-value=2.2e-22  Score=206.67  Aligned_cols=171  Identities=22%  Similarity=0.208  Sum_probs=132.6

Q ss_pred             CCCceeeeeeccCceEEEEE--------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCccc
Q psy9184         261 SALKNCKKIGEGVYGEVFKL--------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFT  332 (562)
Q Consensus       261 ~~y~~~~~LG~GsfG~Vyka--------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv  332 (562)
                      .+|++.+.||+|+||.||+|        ..+|+|.+....       .......+.+|+.++.++.+             
T Consensus         7 ~~~~~~~~lg~G~~g~V~~a~~~~~~~~~~~~ik~~~~~~-------~~~~~~~~~~Ei~~l~~l~~-------------   66 (303)
T cd05088           7 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYA-------SKDDHRDFAGELEVLCKLGH-------------   66 (303)
T ss_pred             hhceeeeeecCCCCceEEEEEEccCCceeeEEEEEecccC-------CHHHHHHHHHHHHHHHHhcC-------------
Confidence            56889999999999999999        245777665321       23344677889999999943             


Q ss_pred             ccccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc-------------------cC
Q psy9184         333 ELLKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK-------------------YR  393 (562)
Q Consensus       333 ~l~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~-------------------~l  393 (562)
                                  ||||+++++++..             ++.+|+||||+++|++.+.+.                   .+
T Consensus        67 ------------h~~iv~~~~~~~~-------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l  121 (303)
T cd05088          67 ------------HPNIINLLGACEH-------------RGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTL  121 (303)
T ss_pred             ------------CCCcceEEEEECC-------------CCCceEEEEeCCCCcHHHHHHhcccccccccccccccccCcC
Confidence                        3999999998865             557999999999998766542                   36


Q ss_pred             CHHHHHHHHHHHHHHHHHHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecC----
Q psy9184         394 SPNQTYAMILQVVFSLAVAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVG----  469 (562)
Q Consensus       394 ~e~~i~~I~~QIl~aL~yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~----  469 (562)
                      ++..++.++.||+.||+|||+ .||+||||||+|||++.++                    .++|+|||+++....    
T Consensus       122 ~~~~~~~~~~qi~~al~~LH~-~gi~H~dlkp~Nili~~~~--------------------~~kl~dfg~~~~~~~~~~~  180 (303)
T cd05088         122 SSQQLLHFAADVARGMDYLSQ-KQFIHRDLAARNILVGENY--------------------VAKIADFGLSRGQEVYVKK  180 (303)
T ss_pred             CHHHHHHHHHHHHHHHHHHHh-CCccccccchheEEecCCC--------------------cEEeCccccCcccchhhhc
Confidence            788999999999999999999 7999999999999998876                    799999999974321    


Q ss_pred             CcEEEeecCCCccccCCC-CCcHHHHHHH
Q psy9184         470 EKICYYDLSQDEELFEGE-GDYQFDMYRM  497 (562)
Q Consensus       470 ~g~v~~~l~~~pelF~g~-~~~q~dIy~l  497 (562)
                      .....+..|++||.+.+. .+...|||++
T Consensus       181 ~~~~~~~~y~aPE~~~~~~~~~~~Di~sl  209 (303)
T cd05088         181 TMGRLPVRWMAIESLNYSVYTTNSDVWSY  209 (303)
T ss_pred             ccCCCcccccCHHHHhccCCcccccchhh
Confidence            111123457888877653 3445777764

Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A

>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1

Probab=99.89  E-value=2e-22  Score=199.52  Aligned_cols=231  Identities=16%  Similarity=0.185  Sum_probs=163.6

Q ss_pred             CCceeeeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCcccccc
Q psy9184         262 ALKNCKKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTELL  335 (562)
Q Consensus       262 ~y~~~~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~l~  335 (562)
                      +|+..+.||+|+||.||+|      ..||+|.+......   ...+...+.+.+|+.+++.++|                
T Consensus         1 ~~~~~~~ig~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~---~~~~~~~~~~~~e~~~l~~~~h----------------   61 (258)
T cd06632           1 RWRKGELLGSGSFGSVYEGLNLDDGDFFAVKEVSLADDG---QTGQEAVKQLEQEIALLSKLQH----------------   61 (258)
T ss_pred             CccccceeeecCCceEEEEEEcCCCcEEEEEEEEEcccc---ccchHHHHHHHHHHHHHHhcCC----------------
Confidence            3677799999999999999      78999998764311   1123445678899999999998                


Q ss_pred             cccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc---cCCHHHHHHHHHHHHHHHHHH
Q psy9184         336 KCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK---YRSPNQTYAMILQVVFSLAVA  412 (562)
Q Consensus       336 ~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~---~l~e~~i~~I~~QIl~aL~yL  412 (562)
                                |||+++++.+..             +..+|++|||++++++.+.+.   .+++..+..++.||+.||+||
T Consensus        62 ----------~~i~~~~~~~~~-------------~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~l  118 (258)
T cd06632          62 ----------PNIVQYLGTERE-------------EDNLYIFLELVPGGSLAKLLKKYGSFPEPVIRLYTRQILLGLEYL  118 (258)
T ss_pred             ----------CCchheeeeEec-------------CCeEEEEEEecCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHH
Confidence                      999999987764             458999999999887765553   378999999999999999999


Q ss_pred             HhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecCCc----EEEeecCCCccccCCC-
Q psy9184         413 EVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVGEK----ICYYDLSQDEELFEGE-  487 (562)
Q Consensus       413 H~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~~g----~v~~~l~~~pelF~g~-  487 (562)
                      |+ .||+|+||+|+||+++.++                    .+||+|||++.......    ...+..|++||.+... 
T Consensus       119 H~-~~i~H~dl~~~ni~~~~~~--------------------~~kl~d~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~  177 (258)
T cd06632         119 HD-RNTVHRDIKGANILVDTNG--------------------VVKLADFGMAKQVVEFSFAKSFKGSPYWMAPEVIAQQG  177 (258)
T ss_pred             HH-CCcccCCCCHHHEEECCCC--------------------CEEEccCccceeccccccccccCCCcceeCHHHhcCCC
Confidence            99 7999999999999998876                    79999999998765422    2335567888877654 


Q ss_pred             -CCcHHHHHHHhhcccCCCCCCCCCCChhhhHHHHHHHHhhcccCCCCCCCchhHHHHHHHHHHHhcCCCcCcCC
Q psy9184         488 -GDYQFDMYRMMRKQCQNNWQNFTPKNNVFWIHYLVDKATCLKKGYQYLRAPRHQAFELLEELGQNALHFDSCYE  561 (562)
Q Consensus       488 -~~~q~dIy~lm~~~~~~~W~~~~P~tn~~wl~yl~~~Ll~~~~~~~~~~~~~~~~~~~l~~l~~~~l~~~s~~~  561 (562)
                       .+.+.|+|++ |......+.+..|+....-...+....-.  ...+..   .......+.+|..++++.+...|
T Consensus       178 ~~~~~~D~~sl-G~~l~~l~~g~~pf~~~~~~~~~~~~~~~--~~~~~~---~~~~~~~~~~li~~~l~~~p~~R  246 (258)
T cd06632         178 GYGLAADIWSL-GCTVLEMATGKPPWSQLEGVAAVFKIGRS--KELPPI---PDHLSDEAKDFILKCLQRDPSLR  246 (258)
T ss_pred             CCCchhhhHHH-HHHHHHHHhCCCCcccCcHHHHHHHHHhc--ccCCCc---CCCcCHHHHHHHHHHhhcCcccC
Confidence             4666899885 33333344444554332211111111110  111111   11124566778888888776655

Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops

>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3

Probab=99.89  E-value=1.4e-22  Score=211.02  Aligned_cols=172  Identities=19%  Similarity=0.247  Sum_probs=136.1

Q ss_pred             CCCceeeeeeccCceEEEEE-------------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCC
Q psy9184         261 SALKNCKKIGEGVYGEVFKL-------------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENS  327 (562)
Q Consensus       261 ~~y~~~~~LG~GsfG~Vyka-------------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~  327 (562)
                      .+|.+.+.||+|+||.||+|             ..||+|.+....       .......+.+|+.+++++..        
T Consensus        12 ~~~~i~~~ig~G~~g~v~~~~~~~~~~~~~~~~~~vaiK~~~~~~-------~~~~~~~~~~E~~~l~~l~~--------   76 (334)
T cd05100          12 TRLTLGKPLGEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDDA-------TDKDLSDLVSEMEMMKMIGK--------   76 (334)
T ss_pred             hHeeecceeccccCCcEEEEEEeccCCccCCcceeEEEEEccccc-------CHHHHHHHHHHHHHHHhhcC--------
Confidence            46899999999999999998             168999887532       23445678899999999943        


Q ss_pred             CCcccccccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc----------------
Q psy9184         328 TPCFTELLKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK----------------  391 (562)
Q Consensus       328 ~p~fv~l~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~----------------  391 (562)
                                       ||||+++++.+..             ++.+|++|||+.+|++.+.+.                
T Consensus        77 -----------------h~~iv~~~~~~~~-------------~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~  126 (334)
T cd05100          77 -----------------HKNIINLLGACTQ-------------DGPLYVLVEYASKGNLREYLRARRPPGMDYSFDTCKL  126 (334)
T ss_pred             -----------------CCCeeeeeEEEcc-------------CCceEEEEecCCCCcHHHHHHhcCCcccccccccccC
Confidence                             3999999998864             457899999999998765542                


Q ss_pred             ---cCCHHHHHHHHHHHHHHHHHHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeec
Q psy9184         392 ---YRSPNQTYAMILQVVFSLAVAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFV  468 (562)
Q Consensus       392 ---~l~e~~i~~I~~QIl~aL~yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~  468 (562)
                         .+++.++..++.||+.||.|||+ .||+||||||+|||++.++                    .++|+|||+++...
T Consensus       127 ~~~~l~~~~~~~~~~qi~~al~~LH~-~givH~dlkp~Nill~~~~--------------------~~kL~Dfg~~~~~~  185 (334)
T cd05100         127 PEEQLTFKDLVSCAYQVARGMEYLAS-QKCIHRDLAARNVLVTEDN--------------------VMKIADFGLARDVH  185 (334)
T ss_pred             ccccCCHHHHHHHHHHHHHHHHHHHH-CCeeccccccceEEEcCCC--------------------cEEECCcccceecc
Confidence               26678889999999999999999 7999999999999998876                    79999999998764


Q ss_pred             CCc-------EEEeecCCCccccCC-CCCcHHHHHHHh
Q psy9184         469 GEK-------ICYYDLSQDEELFEG-EGDYQFDMYRMM  498 (562)
Q Consensus       469 ~~g-------~v~~~l~~~pelF~g-~~~~q~dIy~lm  498 (562)
                      ...       ...+..|++||.+.+ ..+...|||++.
T Consensus       186 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG  223 (334)
T cd05100         186 NIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFG  223 (334)
T ss_pred             cccccccccCCCcCceEcCHHHhccCCcCchhhhHHHH
Confidence            311       111235789997765 355568888753

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10

Probab=99.88  E-value=1.2e-22  Score=208.57  Aligned_cols=188  Identities=20%  Similarity=0.233  Sum_probs=143.9

Q ss_pred             CCCCCceeeeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCccc
Q psy9184         259 PSSALKNCKKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFT  332 (562)
Q Consensus       259 ~~~~y~~~~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv  332 (562)
                      +.++|++.+.||+|+||.||+|      +.||+|.+.....      .......+.+|+.+++.++|             
T Consensus         5 ~~~~y~~~~~ig~g~~~~v~~~~~~~~~~~vaiK~~~~~~~------~~~~~~~~~~E~~~l~~l~h-------------   65 (309)
T cd07845           5 SVTEFEKLNRIGEGTYGIVYRARDTTSGEIVALKKVRMDNE------RDGIPISSLREITLLLNLRH-------------   65 (309)
T ss_pred             cccceeEeeeeeecCCEEEEEEEECCCCcEEEEEEEEeccC------CCCCcchhhHHHHHHHhCCC-------------
Confidence            3467999999999999999999      7899999986531      11112345689999999998             


Q ss_pred             ccccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc----cCCHHHHHHHHHHHHHH
Q psy9184         333 ELLKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK----YRSPNQTYAMILQVVFS  408 (562)
Q Consensus       333 ~l~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~----~l~e~~i~~I~~QIl~a  408 (562)
                                   +||+++++.+....           .+.+|+||||+.+ ++.+.+.    .+++.++..++.||+.|
T Consensus        66 -------------~~i~~~~~~~~~~~-----------~~~~~lv~e~~~~-~l~~~l~~~~~~l~~~~~~~~~~qi~~~  120 (309)
T cd07845          66 -------------PNIVELKEVVVGKH-----------LDSIFLVMEYCEQ-DLASLLDNMPTPFSESQVKCLMLQLLRG  120 (309)
T ss_pred             -------------CCCcceEEEEecCC-----------CCeEEEEEecCCC-CHHHHHHhcccCCCHHHHHHHHHHHHHH
Confidence                         99999998886421           3468999999974 4433332    38899999999999999


Q ss_pred             HHHHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecCC-----cEEEeecCCCccc
Q psy9184         409 LAVAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVGE-----KICYYDLSQDEEL  483 (562)
Q Consensus       409 L~yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~~-----g~v~~~l~~~pel  483 (562)
                      |.|||+ .|++||||||+||+++.++                    .++|+|||+++.....     ....+..|++||.
T Consensus       121 l~~lH~-~~i~H~dl~p~nil~~~~~--------------------~~kL~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~  179 (309)
T cd07845         121 LQYLHE-NFIIHRDLKVSNLLLTDKG--------------------CLKIADFGLARTYGLPAKPMTPKVVTLWYRAPEL  179 (309)
T ss_pred             HHHHHh-CCeecCCCCHHHEEECCCC--------------------CEEECccceeeecCCccCCCCcccccccccChhh
Confidence            999999 7999999999999999876                    7999999999876532     2334566899998


Q ss_pred             cCCC--CCcHHHHHHHhhcccCCCCCCCCCC
Q psy9184         484 FEGE--GDYQFDMYRMMRKQCQNNWQNFTPK  512 (562)
Q Consensus       484 F~g~--~~~q~dIy~lm~~~~~~~W~~~~P~  512 (562)
                      +.+.  .+...|+|++.-.. ...+.+..|+
T Consensus       180 ~~~~~~~~~~~DvwslG~il-~el~~g~~~f  209 (309)
T cd07845         180 LLGCTTYTTAIDMWAVGCIL-AELLAHKPLL  209 (309)
T ss_pred             hcCCCCcCchHHHHHHHHHH-HHHHhCCCCC
Confidence            7653  35568998864333 3344455554

Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing

>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6

Probab=99.88  E-value=1.4e-22  Score=204.21  Aligned_cols=227  Identities=16%  Similarity=0.152  Sum_probs=151.8

Q ss_pred             CCceeeeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHH-HHhcCCccccCCCCCCccccc
Q psy9184         262 ALKNCKKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMV-TKETSDLQYRTENSTPCFTEL  334 (562)
Q Consensus       262 ~y~~~~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~i-lk~L~h~~~~~~n~~p~fv~l  334 (562)
                      +|++.+.||+|+||.||+|      +.||+|+++....       ......+..|+.+ ++.++|               
T Consensus         2 ~~~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~-------~~~~~~~~~e~~~~~~~~~~---------------   59 (283)
T cd06617           2 DLEVIEELGRGAYGVVDKMRHVPTGTIMAVKRIRATVN-------SQEQKRLLMDLDISMRSVDC---------------   59 (283)
T ss_pred             CceEEEEecccCCeEEEEEEEcCCCcEEEEEEEecCCC-------cHHHHHHHHHHHHHHHHcCC---------------
Confidence            6889999999999999999      7899999986531       1112355667765 444555               


Q ss_pred             ccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCcccc-------ccCCHHHHHHHHHHHHH
Q psy9184         335 LKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDI-------KYRSPNQTYAMILQVVF  407 (562)
Q Consensus       335 ~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l-------~~l~e~~i~~I~~QIl~  407 (562)
                                 |||+++++.+..             ++.+|++|||++| ++...+       ..+++..++.++.||+.
T Consensus        60 -----------~~iv~~~~~~~~-------------~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~~~~~~~qi~~  114 (283)
T cd06617          60 -----------PYTVTFYGALFR-------------EGDVWICMEVMDT-SLDKFYKKVYDKGLTIPEDILGKIAVSIVK  114 (283)
T ss_pred             -----------CCeeeeeEEEec-------------CCcEEEEhhhhcc-cHHHHHHHhccCCCCCCHHHHHHHHHHHHH
Confidence                       999999998864             5579999999974 343222       13789999999999999


Q ss_pred             HHHHHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecCC----cEEEeecCCCccc
Q psy9184         408 SLAVAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVGE----KICYYDLSQDEEL  483 (562)
Q Consensus       408 aL~yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~~----g~v~~~l~~~pel  483 (562)
                      ||.|||+.++++||||||+|||++.++                    .+||+|||+++.....    ....+..|.+||.
T Consensus       115 ~l~~lH~~~~i~h~dlkp~nil~~~~~--------------------~~kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~  174 (283)
T cd06617         115 ALEYLHSKLSVIHRDVKPSNVLINRNG--------------------QVKLCDFGISGYLVDSVAKTIDAGCKPYMAPER  174 (283)
T ss_pred             HHHHHhhcCCeecCCCCHHHEEECCCC--------------------CEEEeecccccccccccccccccCCccccChhh
Confidence            999999944999999999999999876                    7999999999865431    1233556889998


Q ss_pred             cCCC-----CCcHHHHHHHhhcccCCCCCCCCCCChhh-hHHHHHHHHhhcccCCCCCCCchhHHHHHHHHHHHhcCCCc
Q psy9184         484 FEGE-----GDYQFDMYRMMRKQCQNNWQNFTPKNNVF-WIHYLVDKATCLKKGYQYLRAPRHQAFELLEELGQNALHFD  557 (562)
Q Consensus       484 F~g~-----~~~q~dIy~lm~~~~~~~W~~~~P~tn~~-wl~yl~~~Ll~~~~~~~~~~~~~~~~~~~l~~l~~~~l~~~  557 (562)
                      +.+.     .+...|+|++.-. ....+.+..|+.+.. -...+...+-.....++.     ...-..+..|...+|..+
T Consensus       175 ~~~~~~~~~~~~~~Di~slG~~-l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~l~~li~~~l~~~  248 (283)
T cd06617         175 INPELNQKGYDVKSDVWSLGIT-MIELATGRFPYDSWKTPFQQLKQVVEEPSPQLPA-----EKFSPEFQDFVNKCLKKN  248 (283)
T ss_pred             cCCcccccccCccccchhhHHH-HHHHHhCCCCCCccccCHHHHHHHHhcCCCCCCc-----cccCHHHHHHHHHHccCC
Confidence            8753     2344788764322 223334444443211 012222221110011111     112345777788888777


Q ss_pred             CcCC
Q psy9184         558 SCYE  561 (562)
Q Consensus       558 s~~~  561 (562)
                      ...|
T Consensus       249 p~~R  252 (283)
T cd06617         249 YKER  252 (283)
T ss_pred             hhhC
Confidence            6655

Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs

>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1

Probab=99.88  E-value=2e-22  Score=204.62  Aligned_cols=174  Identities=22%  Similarity=0.310  Sum_probs=138.3

Q ss_pred             CCceeeeeeccCceEEEEE---------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCccc
Q psy9184         262 ALKNCKKIGEGVYGEVFKL---------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFT  332 (562)
Q Consensus       262 ~y~~~~~LG~GsfG~Vyka---------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv  332 (562)
                      .|++.+.||+|+||.||+|         ..||+|++.....    .......+.+.+|+.+++.+.+             
T Consensus         1 ~y~~~~~lg~G~~g~v~~~~~~~~~~~g~~~aiK~~~~~~~----~~~~~~~~~~~~e~~~l~~l~~-------------   63 (290)
T cd05613           1 NFELLKVLGTGAYGKVFLVRKVSGHDSGKLYAMKVLKKATI----VQKAKTTEHTRTERQVLEHIRQ-------------   63 (290)
T ss_pred             CceeeeeeccCCcceEEEEEeccCCCCCceEEEEEeehhhh----hhcchHHHHHHHHHHHHHhccc-------------
Confidence            3788999999999999987         5699999875421    1122334567889999999976             


Q ss_pred             ccccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc---cCCHHHHHHHHHHHHHHH
Q psy9184         333 ELLKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK---YRSPNQTYAMILQVVFSL  409 (562)
Q Consensus       333 ~l~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~---~l~e~~i~~I~~QIl~aL  409 (562)
                                  |++|+.+++.|..             +...|+||||+++|++.+.+.   .+++..+..++.||+.||
T Consensus        64 ------------~~~i~~~~~~~~~-------------~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~al  118 (290)
T cd05613          64 ------------SPFLVTLHYAFQT-------------DTKLHLILDYINGGELFTHLSQRERFKEQEVQIYSGEIVLAL  118 (290)
T ss_pred             ------------CCChhceeeEeec-------------CCeEEEEEecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHH
Confidence                        5999999988875             558899999999998877664   388999999999999999


Q ss_pred             HHHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecCC------cEEEeecCCCccc
Q psy9184         410 AVAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVGE------KICYYDLSQDEEL  483 (562)
Q Consensus       410 ~yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~~------g~v~~~l~~~pel  483 (562)
                      .|||+ .|++||||||+|||++.++                    .++|+|||+++.....      ....+..|++||.
T Consensus       119 ~~lH~-~~i~H~dl~p~nil~~~~~--------------------~~kl~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~  177 (290)
T cd05613         119 EHLHK-LGIIYRDIKLENILLDSNG--------------------HVVLTDFGLSKEFHEDEVERAYSFCGTIEYMAPDI  177 (290)
T ss_pred             HHHHh-CCeeccCCCHHHeEECCCC--------------------CEEEeeCccceecccccccccccccCCcccCChhh
Confidence            99999 7999999999999998876                    7999999999876431      1223556788998


Q ss_pred             cCCC---CCcHHHHHHHh
Q psy9184         484 FEGE---GDYQFDMYRMM  498 (562)
Q Consensus       484 F~g~---~~~q~dIy~lm  498 (562)
                      +.+.   .....|||++.
T Consensus       178 ~~~~~~~~~~~~Dv~slG  195 (290)
T cd05613         178 VRGGDGGHDKAVDWWSMG  195 (290)
T ss_pred             ccCCCCCCCccccHHHHH
Confidence            7642   34458888753

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph

>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=99.88  E-value=2.1e-22  Score=203.56  Aligned_cols=173  Identities=18%  Similarity=0.194  Sum_probs=138.1

Q ss_pred             CCCceeeeeeccCceEEEEE----------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCc
Q psy9184         261 SALKNCKKIGEGVYGEVFKL----------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPC  330 (562)
Q Consensus       261 ~~y~~~~~LG~GsfG~Vyka----------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~  330 (562)
                      .+|++.+.||+|+||.||+|          ..||+|.+....        ....+.+.+|+.+++.++|           
T Consensus         4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~v~iK~~~~~~--------~~~~~~~~~e~~~l~~l~h-----------   64 (284)
T cd05081           4 RHLKFIQQLGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHST--------AEHLRDFEREIEILKSLQH-----------   64 (284)
T ss_pred             ccceeeeeccCCCCceEEEEEecCCcCCCCcEEEEEEeccCC--------HHHHHHHHHHHHHHHhCCC-----------
Confidence            56889999999999999997          479999987542        3345678899999999998           


Q ss_pred             ccccccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc----cCCHHHHHHHHHHHH
Q psy9184         331 FTELLKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK----YRSPNQTYAMILQVV  406 (562)
Q Consensus       331 fv~l~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~----~l~e~~i~~I~~QIl  406 (562)
                                     |||+++++++...           ....+|+||||+++|++.+.+.    .+++..+..++.||+
T Consensus        65 ---------------~~iv~~~~~~~~~-----------~~~~~~lv~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~l~  118 (284)
T cd05081          65 ---------------DNIVKYKGVCYSA-----------GRRNLRLVMEYLPYGSLRDYLQKHRERLDHRKLLLYASQIC  118 (284)
T ss_pred             ---------------CCeeEEEEEEccC-----------CCCceEEEEEecCCCCHHHHHHhcCcCCCHHHHHHHHHHHH
Confidence                           9999988766431           1346899999999998876663    378999999999999


Q ss_pred             HHHHHHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecCCcEE--------EeecC
Q psy9184         407 FSLAVAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVGEKIC--------YYDLS  478 (562)
Q Consensus       407 ~aL~yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~~g~v--------~~~l~  478 (562)
                      .||+|||+ .||+||||||+|||++.++                    .++|+|||+++........        ....|
T Consensus       119 ~aL~~LH~-~~i~H~dlkp~nili~~~~--------------------~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y  177 (284)
T cd05081         119 KGMEYLGS-KRYVHRDLATRNILVESEN--------------------RVKIGDFGLTKVLPQDKEYYKVREPGESPIFW  177 (284)
T ss_pred             HHHHHHHH-CCceeccCCHhhEEECCCC--------------------eEEECCCcccccccCCCcceeecCCCCCceEe
Confidence            99999999 7999999999999998876                    7999999999876432111        11236


Q ss_pred             CCccccCC-CCCcHHHHHHHhh
Q psy9184         479 QDEELFEG-EGDYQFDMYRMMR  499 (562)
Q Consensus       479 ~~pelF~g-~~~~q~dIy~lm~  499 (562)
                      .+||.+.+ ......|||++.-
T Consensus       178 ~aPE~~~~~~~~~~~Di~slG~  199 (284)
T cd05081         178 YAPESLTESKFSVASDVWSFGV  199 (284)
T ss_pred             eCHHHhccCCcChHHHHHHHHH
Confidence            78887765 3556689988643

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th

>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4

Probab=99.88  E-value=4.9e-22  Score=200.35  Aligned_cols=172  Identities=23%  Similarity=0.295  Sum_probs=138.1

Q ss_pred             CCCceeeeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCccccc
Q psy9184         261 SALKNCKKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTEL  334 (562)
Q Consensus       261 ~~y~~~~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~l  334 (562)
                      ++|+..+.||+|+||.||+|      +.||+|++.....      .....+.+.+|+.+++.++|               
T Consensus         1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~------~~~~~~~~~~e~~~l~~~~h---------------   59 (286)
T cd07847           1 EKYEKLSKIGEGSYGVVFKCRNRETGQIVAIKKFVESED------DPVIKKIALREIRMLKQLKH---------------   59 (286)
T ss_pred             CceeeeeeecccCCeEEEEEEECCCCcEEEEEEEeeccc------CccccHHHHHHHHHHHhCCC---------------
Confidence            36889999999999999999      7899999875421      11222456789999999998               


Q ss_pred             ccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc---cCCHHHHHHHHHHHHHHHHH
Q psy9184         335 LKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK---YRSPNQTYAMILQVVFSLAV  411 (562)
Q Consensus       335 ~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~---~l~e~~i~~I~~QIl~aL~y  411 (562)
                                 ||++++++.+..             +...|+||||++++.+.....   .+++.++..++.||+.||.|
T Consensus        60 -----------~~i~~~~~~~~~-------------~~~~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~ql~~~l~~  115 (286)
T cd07847          60 -----------PNLVNLIEVFRR-------------KRKLHLVFEYCDHTVLNELEKNPRGVPEHLIKKIIWQTLQAVNF  115 (286)
T ss_pred             -----------CCEeeeeeEEee-------------CCEEEEEEeccCccHHHHHHhCCCCCCHHHHHHHHHHHHHHHHH
Confidence                       999999998875             458999999999774433332   38899999999999999999


Q ss_pred             HHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecCCc-----EEEeecCCCccccCC
Q psy9184         412 AEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVGEK-----ICYYDLSQDEELFEG  486 (562)
Q Consensus       412 LH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~~g-----~v~~~l~~~pelF~g  486 (562)
                      ||+ .+|+||||||+||+++.++                    .++|+|||++.......     ......|.+||.+.+
T Consensus       116 LH~-~~i~H~dl~p~nil~~~~~--------------------~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~aPE~~~~  174 (286)
T cd07847         116 CHK-HNCIHRDVKPENILITKQG--------------------QIKLCDFGFARILTGPGDDYTDYVATRWYRAPELLVG  174 (286)
T ss_pred             HHH-CCceecCCChhhEEEcCCC--------------------cEEECccccceecCCCcccccCcccccccCCHHHHhC
Confidence            999 7999999999999999876                    79999999998765432     223456789998766


Q ss_pred             C--CCcHHHHHHHh
Q psy9184         487 E--GDYQFDMYRMM  498 (562)
Q Consensus       487 ~--~~~q~dIy~lm  498 (562)
                      .  .....|+|++.
T Consensus       175 ~~~~~~~~Di~slG  188 (286)
T cd07847         175 DTQYGPPVDVWAIG  188 (286)
T ss_pred             CCCcCchhhhHHHH
Confidence            3  34568998863

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio

>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase

Probab=99.88  E-value=5.6e-22  Score=201.32  Aligned_cols=190  Identities=19%  Similarity=0.211  Sum_probs=141.5

Q ss_pred             CCCceeeeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCccccc
Q psy9184         261 SALKNCKKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTEL  334 (562)
Q Consensus       261 ~~y~~~~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~l  334 (562)
                      ++|++.+.||+|+||.||+|      +.||+|++.....      .......+.+|+.+++.+.|               
T Consensus         1 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~lK~~~~~~~------~~~~~~~~~~E~~~l~~l~~---------------   59 (295)
T cd07837           1 DAYEKLEKIGEGTYGKVYKARDKNTGKLVALKKTRLEMD------EEGIPPTALREISLLQMLSE---------------   59 (295)
T ss_pred             CCceEeeEecccCCeEEEEEEECCCCcEEEEEeehhhcc------ccCCchHHHHHHHHHHHccC---------------
Confidence            35889999999999999999      7899999876531      11223467889999999987               


Q ss_pred             ccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc--------cCCHHHHHHHHHHHH
Q psy9184         335 LKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK--------YRSPNQTYAMILQVV  406 (562)
Q Consensus       335 ~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~--------~l~e~~i~~I~~QIl  406 (562)
                                ||||+++++.+.....        ......|++|||+.+ ++...+.        .+++..++.++.||+
T Consensus        60 ----------~~~i~~~~~~~~~~~~--------~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~qi~  120 (295)
T cd07837          60 ----------SIYIVRLLDVEHVEEK--------NGKPSLYLVFEYLDS-DLKKFMDSNGRGPGRPLPAKTIKSFMYQLL  120 (295)
T ss_pred             ----------CCCccceeeeEeecCC--------CCCceEEEEeeccCc-CHHHHHHHhcccCCCCCCHHHHHHHHHHHH
Confidence                      6999999988765221        112358999999985 4544432        368999999999999


Q ss_pred             HHHHHHHhhCCeEeccCCCCCEEEcc-CCCCCcccccCCcccccccCCceEEEEeccceeeecC-----CcEEEeecCCC
Q psy9184         407 FSLAVAEVELEFEHRDLHMSNILVLQ-TDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVG-----EKICYYDLSQD  480 (562)
Q Consensus       407 ~aL~yLH~~~~IiHRDLKpeNILl~~-~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~-----~g~v~~~l~~~  480 (562)
                      .||.|||+ .+|+||||||+||+++. ++                    .++|+|||+++....     .....+..|.+
T Consensus       121 ~~L~~LH~-~~i~H~dl~~~nil~~~~~~--------------------~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~a  179 (295)
T cd07837         121 KGVAHCHK-HGVMHRDLKPQNLLVDKQKG--------------------LLKIADLGLGRAFSIPVKSYTHEIVTLWYRA  179 (295)
T ss_pred             HHHHHHHH-CCeeecCCChHHEEEecCCC--------------------eEEEeecccceecCCCccccCCcccccCCCC
Confidence            99999999 79999999999999998 43                    799999999986542     12234566889


Q ss_pred             ccccCCC--CCcHHHHHHHhhcccCCCCCCCCCC
Q psy9184         481 EELFEGE--GDYQFDMYRMMRKQCQNNWQNFTPK  512 (562)
Q Consensus       481 pelF~g~--~~~q~dIy~lm~~~~~~~W~~~~P~  512 (562)
                      ||.+.+.  .+...|+|++.-. ....+.+..|+
T Consensus       180 PE~~~~~~~~~~~~Di~slG~~-l~~l~~g~~~~  212 (295)
T cd07837         180 PEVLLGSTHYSTPVDIWSVGCI-FAEMSRKQPLF  212 (295)
T ss_pred             hHHhhCCCCCCchHHHHHHHHH-HHHHHcCCCCC
Confidence            9987653  3556899886433 32333344444

Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm

>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase

Probab=99.88  E-value=2.1e-22  Score=200.60  Aligned_cols=169  Identities=20%  Similarity=0.250  Sum_probs=136.5

Q ss_pred             CCCceeeeeeccCceEEEEE----eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCccccccc
Q psy9184         261 SALKNCKKIGEGVYGEVFKL----NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTELLK  336 (562)
Q Consensus       261 ~~y~~~~~LG~GsfG~Vyka----~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~l~~  336 (562)
                      .+|++.+.||+|+||.||++    ..+|+|.+....          ..+.+.+|+.+++.++|                 
T Consensus         6 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~k~~~~~~----------~~~~~~~e~~~l~~l~~-----------------   58 (256)
T cd05082           6 KELKLLQTIGKGEFGDVMLGDYRGNKVAVKCIKNDA----------TAQAFLAEASVMTQLRH-----------------   58 (256)
T ss_pred             HhCeeeeeecccCCCeEEEEEEcCCcEEEEEeCCCc----------hHHHHHHHHHHHHhCCC-----------------
Confidence            56899999999999999999    789999886432          12467899999999998                 


Q ss_pred             ccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc-----cCCHHHHHHHHHHHHHHHHH
Q psy9184         337 CSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK-----YRSPNQTYAMILQVVFSLAV  411 (562)
Q Consensus       337 ~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~-----~l~e~~i~~I~~QIl~aL~y  411 (562)
                               ++++++++++..            .++..|++|||+++|++.+.+.     .+++..+..++.||+.||+|
T Consensus        59 ---------~~i~~~~~~~~~------------~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~  117 (256)
T cd05082          59 ---------SNLVQLLGVIVE------------EKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEY  117 (256)
T ss_pred             ---------CCeeeEEEEEEc------------CCCceEEEEECCCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHH
Confidence                     999999876532            2457899999999998877653     27789999999999999999


Q ss_pred             HHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecCC--cEEEeecCCCccccCCC-C
Q psy9184         412 AEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVGE--KICYYDLSQDEELFEGE-G  488 (562)
Q Consensus       412 LH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~~--g~v~~~l~~~pelF~g~-~  488 (562)
                      ||+ .||+||||||+||+++.++                    .+||+|||+++.....  .......|++||.+.+. .
T Consensus       118 lH~-~~i~H~dlkp~nil~~~~~--------------------~~kl~dfg~~~~~~~~~~~~~~~~~y~aPE~~~~~~~  176 (256)
T cd05082         118 LEA-NNFVHRDLAARNVLVSEDN--------------------VAKVSDFGLTKEASSTQDTGKLPVKWTAPEALREKKF  176 (256)
T ss_pred             HHh-CCEeccccchheEEEcCCC--------------------cEEecCCccceeccccCCCCccceeecCHHHHccCCC
Confidence            999 7999999999999999886                    7999999999875431  12223358899987763 4


Q ss_pred             CcHHHHHHHh
Q psy9184         489 DYQFDMYRMM  498 (562)
Q Consensus       489 ~~q~dIy~lm  498 (562)
                      +...|||++.
T Consensus       177 ~~~~Dv~slG  186 (256)
T cd05082         177 STKSDVWSFG  186 (256)
T ss_pred             CchhhhHHHH
Confidence            5558888753

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re

>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=99.88  E-value=7.5e-23  Score=204.51  Aligned_cols=226  Identities=13%  Similarity=0.155  Sum_probs=155.6

Q ss_pred             eeeeccCceEEEEE------e-------eEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCcccc
Q psy9184         267 KKIGEGVYGEVFKL------N-------NSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTE  333 (562)
Q Consensus       267 ~~LG~GsfG~Vyka------~-------~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~  333 (562)
                      +.||.|+||.||+|      .       .+|+|.+...        .....+.+..|+.+++.++|              
T Consensus         1 ~~lg~G~~~~Vy~~~~~~~~~~~~~~~~~~~~k~~~~~--------~~~~~~~~~~e~~~l~~~~h--------------   58 (258)
T cd05078           1 ESLGQGTFTKIFKGIRREVGDYGELHKTEVLLKVLDKS--------HRNYSESFFEAASMMSQLSH--------------   58 (258)
T ss_pred             CCCCcccchhheeeeecccccccccccchhhHHhhcch--------hHHHHHHHHHHHHHHHhCCC--------------
Confidence            36999999999999      1       2777777543        23344677889999999998              


Q ss_pred             cccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc----cCCHHHHHHHHHHHHHHH
Q psy9184         334 LLKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK----YRSPNQTYAMILQVVFSL  409 (562)
Q Consensus       334 l~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~----~l~e~~i~~I~~QIl~aL  409 (562)
                                  ||++++++.+..             +...++||||+.+|++...+.    .+++..+..++.||+.||
T Consensus        59 ------------~~iv~~~~~~~~-------------~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l  113 (258)
T cd05078          59 ------------KHLVLNYGVCVC-------------GDESIMVQEYVKFGSLDTYLKKNKNLINISWKLEVAKQLAWAL  113 (258)
T ss_pred             ------------CChhheeeEEEe-------------CCCcEEEEecCCCCcHHHHHhcCCCCCCHHHHHHHHHHHHHHH
Confidence                        999999988875             457899999999998766653    278999999999999999


Q ss_pred             HHHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecCCc-EEEeecCCCccccCCC-
Q psy9184         410 AVAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVGEK-ICYYDLSQDEELFEGE-  487 (562)
Q Consensus       410 ~yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~~g-~v~~~l~~~pelF~g~-  487 (562)
                      +|||+ .+|+||||||+|||++.++...           ... -..++++|||++....... ...+..|++||.+.+. 
T Consensus       114 ~~lH~-~~iiH~dlkp~nili~~~~~~~-----------~~~-~~~~~l~d~g~~~~~~~~~~~~~~~~y~aPE~~~~~~  180 (258)
T cd05078         114 HFLED-KGLTHGNVCAKNVLLIREEDRK-----------TGN-PPFIKLSDPGISITVLPKEILLERIPWVPPECIENPQ  180 (258)
T ss_pred             HHHHH-CCeecCCCccceEEEecccccc-----------cCC-CceEEecccccccccCCchhccccCCccCchhccCCC
Confidence            99999 7999999999999998875310           000 1148999999987665422 2345568999998763 


Q ss_pred             -CCcHHHHHHHhhcccCCCCCC-CCCCChhhhHHHHHHHHhhcccCCCCCCCchhHHHHHHHHHHHhcCCCcCcCC
Q psy9184         488 -GDYQFDMYRMMRKQCQNNWQN-FTPKNNVFWIHYLVDKATCLKKGYQYLRAPRHQAFELLEELGQNALHFDSCYE  561 (562)
Q Consensus       488 -~~~q~dIy~lm~~~~~~~W~~-~~P~tn~~wl~yl~~~Ll~~~~~~~~~~~~~~~~~~~l~~l~~~~l~~~s~~~  561 (562)
                       .....|||+++-... ..+.+ ..|+......... ..... ...++...      ...+.+|...+|+++...|
T Consensus       181 ~~~~~~DiwslG~~l~-~l~~g~~~~~~~~~~~~~~-~~~~~-~~~~~~~~------~~~~~~li~~~l~~~p~~R  247 (258)
T cd05078         181 NLSLAADKWSFGTTLW-EIFSGGDKPLSALDSQKKL-QFYED-RHQLPAPK------WTELANLINQCMDYEPDFR  247 (258)
T ss_pred             CCCchhhHHHHHHHHH-HHHcCCCCChhhccHHHHH-HHHHc-cccCCCCC------cHHHHHHHHHHhccChhhC
Confidence             355689988643322 22232 2333222212111 11111 22222221      3467788888888887765

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity

>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases

Probab=99.88  E-value=2.4e-22  Score=200.51  Aligned_cols=236  Identities=20%  Similarity=0.245  Sum_probs=167.3

Q ss_pred             CCCCCceeeeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCccc
Q psy9184         259 PSSALKNCKKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFT  332 (562)
Q Consensus       259 ~~~~y~~~~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv  332 (562)
                      +.++|++.+.||+|+||.||+|      +.+|+|++....         ...+.+.+|+.+++.+..             
T Consensus         4 ~~~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~---------~~~~~~~~e~~~l~~~~~-------------   61 (275)
T cd06608           4 PTGIFELVEVIGEGTYGKVYKARHKKTGQLVAIKIMDIIE---------DEEEEIKEEYNILRKYSN-------------   61 (275)
T ss_pred             chhheeheeeecCCCCeEEEEEEECCCCcEEEEEEEecCc---------hhHHHHHHHHHHHHHhcC-------------
Confidence            4578999999999999999999      689999988653         123567899999999943             


Q ss_pred             ccccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc-------cCCHHHHHHHHHHH
Q psy9184         333 ELLKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK-------YRSPNQTYAMILQV  405 (562)
Q Consensus       333 ~l~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~-------~l~e~~i~~I~~QI  405 (562)
                                  ||||+++++.|....      + ......+|+||||+.++++.+.+.       .+++..++.++.|+
T Consensus        62 ------------h~~i~~~~~~~~~~~------~-~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~ql  122 (275)
T cd06608          62 ------------HPNIATFYGAFIKKN------P-PGNDDQLWLVMELCGGGSVTDLVKGLRKKGKRLKEEWIAYILRET  122 (275)
T ss_pred             ------------CCChheEEEEEEecC------C-CCcceEEEEEEEcCCCCcHHHHHHHHhhcCCCCCHHHHHHHHHHH
Confidence                        399999998886522      0 012457899999999987755432       47899999999999


Q ss_pred             HHHHHHHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecC-----CcEEEeecCCC
Q psy9184         406 VFSLAVAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVG-----EKICYYDLSQD  480 (562)
Q Consensus       406 l~aL~yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~-----~g~v~~~l~~~  480 (562)
                      +.||.|||+ .+|+|+||+|+||+++.++                    .++|+|||++.....     .....+..|++
T Consensus       123 ~~al~~lH~-~~i~H~~l~p~ni~~~~~~--------------------~~~l~d~~~~~~~~~~~~~~~~~~~~~~y~a  181 (275)
T cd06608         123 LRGLAYLHE-NKVIHRDIKGQNILLTKNA--------------------EVKLVDFGVSAQLDSTLGRRNTFIGTPYWMA  181 (275)
T ss_pred             HHHHHHHhc-CCcccCCCCHHHEEEccCC--------------------eEEECCCccceecccchhhhcCccccccccC
Confidence            999999999 7999999999999999876                    799999999986543     23445667899


Q ss_pred             ccccCCC------CCcHHHHHHHhhcccCCCCCCCCCCChhhhHHHHHHHHhhcccCCCCCCCchhHHHHHHHHHHHhcC
Q psy9184         481 EELFEGE------GDYQFDMYRMMRKQCQNNWQNFTPKNNVFWIHYLVDKATCLKKGYQYLRAPRHQAFELLEELGQNAL  554 (562)
Q Consensus       481 pelF~g~------~~~q~dIy~lm~~~~~~~W~~~~P~tn~~wl~yl~~~Ll~~~~~~~~~~~~~~~~~~~l~~l~~~~l  554 (562)
                      ||++.+.      .+...|||++ |......+.+..|+........+.+ +.. . ..+. -.......+.+.+|.+.+|
T Consensus       182 PE~~~~~~~~~~~~~~~~Dv~sl-G~il~~l~~g~~p~~~~~~~~~~~~-~~~-~-~~~~-~~~~~~~~~~~~~li~~~l  256 (275)
T cd06608         182 PEVIACDEQPDASYDARSDVWSL-GITAIELADGKPPLCDMHPMRALFK-IPR-N-PPPT-LKSPENWSKKFNDFISECL  256 (275)
T ss_pred             HhHhcccccccCCccccccHHHh-HHHHHHHHhCCCCccccchHHHHHH-hhc-c-CCCC-CCchhhcCHHHHHHHHHHh
Confidence            9987642      2345888875 3333344455555543322222222 222 1 1111 1111123457788889999


Q ss_pred             CCcCcCC
Q psy9184         555 HFDSCYE  561 (562)
Q Consensus       555 ~~~s~~~  561 (562)
                      ..+...|
T Consensus       257 ~~dp~~R  263 (275)
T cd06608         257 IKNYEQR  263 (275)
T ss_pred             hcChhhC
Confidence            8776654

Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I

>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7

Probab=99.88  E-value=2.3e-22  Score=204.71  Aligned_cols=173  Identities=21%  Similarity=0.297  Sum_probs=138.5

Q ss_pred             CCceeeeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCcccccc
Q psy9184         262 ALKNCKKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTELL  335 (562)
Q Consensus       262 ~y~~~~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~l~  335 (562)
                      +|++.+.||+|+||.||+|      +.||+|.+.......   ........+..|+.+++.++|                
T Consensus         1 ~y~~~~~lg~g~~~~vy~~~~~~~~~~v~iK~~~~~~~~~---~~~~~~~~~~~e~~~l~~~~h----------------   61 (298)
T cd07841           1 RYEKGKKLGEGTYAVVYKARDKETGRIVAIKKIKLGERKE---AKDGINFTALREIKLLQELKH----------------   61 (298)
T ss_pred             CceeeeeeeeccccEEEEEEECCCCcEEEEEEEecccccc---ccchhhHHHHHHHHHHhhcCC----------------
Confidence            4788899999999999999      689999998654210   012233456789999999998                


Q ss_pred             cccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc----cCCHHHHHHHHHHHHHHHHH
Q psy9184         336 KCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK----YRSPNQTYAMILQVVFSLAV  411 (562)
Q Consensus       336 ~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~----~l~e~~i~~I~~QIl~aL~y  411 (562)
                                +||+++++++.+             ++.+|+||||+ +|++.+.+.    .+++..+..++.||+.||.|
T Consensus        62 ----------~~i~~~~~~~~~-------------~~~~~lv~e~~-~~~L~~~i~~~~~~~~~~~~~~~~~qi~~al~~  117 (298)
T cd07841          62 ----------PNIIGLLDVFGH-------------KSNINLVFEFM-ETDLEKVIKDKSIVLTPADIKSYMLMTLRGLEY  117 (298)
T ss_pred             ----------CCChhhhheeec-------------CCEEEEEEccc-CCCHHHHHhccCCCCCHHHHHHHHHHHHHHHHH
Confidence                      999999998875             55899999999 776655553    48899999999999999999


Q ss_pred             HHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecCC-----cEEEeecCCCccccCC
Q psy9184         412 AEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVGE-----KICYYDLSQDEELFEG  486 (562)
Q Consensus       412 LH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~~-----g~v~~~l~~~pelF~g  486 (562)
                      ||+ .||+||||||+|||++.++                    .++|+|||+++.....     ....+..|.+||.+.+
T Consensus       118 lH~-~~i~H~dl~p~nill~~~~--------------------~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~  176 (298)
T cd07841         118 LHS-NWILHRDLKPNNLLIASDG--------------------VLKLADFGLARSFGSPNRKMTHQVVTRWYRAPELLFG  176 (298)
T ss_pred             HHh-CCeeecCCChhhEEEcCCC--------------------CEEEccceeeeeccCCCccccccccceeeeCHHHHhC
Confidence            999 7999999999999999876                    7999999999876542     1233456889998865


Q ss_pred             C--CCcHHHHHHHh
Q psy9184         487 E--GDYQFDMYRMM  498 (562)
Q Consensus       487 ~--~~~q~dIy~lm  498 (562)
                      .  .....|+|++.
T Consensus       177 ~~~~~~~~Dv~slG  190 (298)
T cd07841         177 ARHYGVGVDMWSVG  190 (298)
T ss_pred             CCCCCcHHHHHHHH
Confidence            3  34568998863

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is

>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases

Probab=99.88  E-value=3.3e-22  Score=198.84  Aligned_cols=172  Identities=19%  Similarity=0.207  Sum_probs=140.3

Q ss_pred             CCCCceeeeeeccCceEEEEE----eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCcccccc
Q psy9184         260 SSALKNCKKIGEGVYGEVFKL----NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTELL  335 (562)
Q Consensus       260 ~~~y~~~~~LG~GsfG~Vyka----~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~l~  335 (562)
                      ..+|++.+.||.|+||.||+|    +.||+|.+....        . ..+++.+|+.+++.++|                
T Consensus         5 ~~~~~~~~~ig~g~~g~v~~~~~~~~~v~iK~~~~~~--------~-~~~~~~~e~~~l~~l~~----------------   59 (256)
T cd05039           5 SKELKLGATIGKGEFGDVMLGDYRGQKVAVKCLKDDS--------T-AAQAFLAEASVMTTLRH----------------   59 (256)
T ss_pred             hhhccceeeeecCCCceEEEEEecCcEEEEEEeccch--------h-HHHHHHHHHHHHHhcCC----------------
Confidence            467899999999999999999    899999998543        1 34678899999999998                


Q ss_pred             cccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc-----cCCHHHHHHHHHHHHHHHH
Q psy9184         336 KCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK-----YRSPNQTYAMILQVVFSLA  410 (562)
Q Consensus       336 ~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~-----~l~e~~i~~I~~QIl~aL~  410 (562)
                                +||+++++.+..             .+..|+||||+++|++.+.+.     .+++..+..++.|++.||.
T Consensus        60 ----------~~i~~~~~~~~~-------------~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~  116 (256)
T cd05039          60 ----------PNLVQLLGVVLQ-------------GNPLYIVTEYMAKGSLVDYLRSRGRAVITLAQQLGFALDVCEGME  116 (256)
T ss_pred             ----------cceeeeEEEEcC-------------CCCeEEEEEecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHH
Confidence                      999999988764             558999999999988776553     4789999999999999999


Q ss_pred             HHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecCCc--EEEeecCCCccccCC-C
Q psy9184         411 VAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVGEK--ICYYDLSQDEELFEG-E  487 (562)
Q Consensus       411 yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~~g--~v~~~l~~~pelF~g-~  487 (562)
                      |||+ .+|+||||||+||+++.++                    .++|+|||+++......  ......|.+||.+.+ .
T Consensus       117 ~lh~-~~i~H~di~p~Nili~~~~--------------------~~~l~d~g~~~~~~~~~~~~~~~~~~~ape~~~~~~  175 (256)
T cd05039         117 YLEE-KNFVHRDLAARNVLVSEDL--------------------VAKVSDFGLAKEASQGQDSGKLPVKWTAPEALREKK  175 (256)
T ss_pred             HHHh-CCccchhcccceEEEeCCC--------------------CEEEcccccccccccccccCCCcccccCchhhcCCc
Confidence            9999 7999999999999998876                    79999999998764321  112334778886654 4


Q ss_pred             CCcHHHHHHHhhc
Q psy9184         488 GDYQFDMYRMMRK  500 (562)
Q Consensus       488 ~~~q~dIy~lm~~  500 (562)
                      .....|+|++.-.
T Consensus       176 ~~~~~Di~slG~i  188 (256)
T cd05039         176 FSTKSDVWSFGIL  188 (256)
T ss_pred             CCcHHHHHHHHHH
Confidence            4556899886433

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk

>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase

Probab=99.88  E-value=2.9e-22  Score=200.25  Aligned_cols=227  Identities=20%  Similarity=0.178  Sum_probs=159.9

Q ss_pred             CCCCCceeeeeeccCceEEEEE-----eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCcccc
Q psy9184         259 PSSALKNCKKIGEGVYGEVFKL-----NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTE  333 (562)
Q Consensus       259 ~~~~y~~~~~LG~GsfG~Vyka-----~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~  333 (562)
                      +.++|++.++||+|+||.||++     ..+|+|.+....         .....+.+|+.+++.++|              
T Consensus         4 ~~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~iK~~~~~~---------~~~~~~~~e~~~l~~l~~--------------   60 (260)
T cd05073           4 PRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGS---------MSVEAFLAEANVMKTLQH--------------   60 (260)
T ss_pred             cccceeEEeEecCccceEEEEEEecCCccEEEEecCCCh---------hHHHHHHHHHHHHHhcCC--------------
Confidence            3478999999999999999999     579999887432         223578889999999998              


Q ss_pred             cccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCcccccc-----CCHHHHHHHHHHHHHH
Q psy9184         334 LLKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIKY-----RSPNQTYAMILQVVFS  408 (562)
Q Consensus       334 l~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~~-----l~e~~i~~I~~QIl~a  408 (562)
                                  +||+++++.+..              ...|++|||+++|++.+.+..     +++..+..++.||+.|
T Consensus        61 ------------~~i~~~~~~~~~--------------~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~a  114 (260)
T cd05073          61 ------------DKLVKLHAVVTK--------------EPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEG  114 (260)
T ss_pred             ------------CCcceEEEEEcC--------------CCeEEEEEeCCCCcHHHHHHhCCccccCHHHHHHHHHHHHHH
Confidence                        999999887752              468999999999988776642     6788899999999999


Q ss_pred             HHHHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecCCc------EEEeecCCCcc
Q psy9184         409 LAVAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVGEK------ICYYDLSQDEE  482 (562)
Q Consensus       409 L~yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~~g------~v~~~l~~~pe  482 (562)
                      |.|||+ .|++||||||+||+++..+                    .++|+|||+++......      ..+...|++||
T Consensus       115 L~~lH~-~~i~H~dl~p~ni~i~~~~--------------------~~~l~d~~~~~~~~~~~~~~~~~~~~~~~y~~PE  173 (260)
T cd05073         115 MAFIEQ-RNYIHRDLRAANILVSASL--------------------VCKIADFGLARVIEDNEYTAREGAKFPIKWTAPE  173 (260)
T ss_pred             HHHHHh-CCccccccCcceEEEcCCC--------------------cEEECCCcceeeccCCCcccccCCcccccccCHh
Confidence            999999 7999999999999998876                    79999999998664321      12234578899


Q ss_pred             ccCCC-CCcHHHHHHHhhcccCCCCC-CCCCCChhhhHHHHHHHHhhcccCCCCCCCchhHHHHHHHHHHHhcCCCcCcC
Q psy9184         483 LFEGE-GDYQFDMYRMMRKQCQNNWQ-NFTPKNNVFWIHYLVDKATCLKKGYQYLRAPRHQAFELLEELGQNALHFDSCY  560 (562)
Q Consensus       483 lF~g~-~~~q~dIy~lm~~~~~~~W~-~~~P~tn~~wl~yl~~~Ll~~~~~~~~~~~~~~~~~~~l~~l~~~~l~~~s~~  560 (562)
                      .+.+. .+...|+|++.-... ..+. +..|+...- ...+...+.. ....+...    ..-..+.++..+++..+...
T Consensus       174 ~~~~~~~~~~~Di~slG~~l~-~l~t~g~~p~~~~~-~~~~~~~~~~-~~~~~~~~----~~~~~~~~~i~~~l~~~p~~  246 (260)
T cd05073         174 AINFGSFTIKSDVWSFGILLM-EIVTYGRIPYPGMS-NPEVIRALER-GYRMPRPE----NCPEELYNIMMRCWKNRPEE  246 (260)
T ss_pred             HhccCCcCccccchHHHHHHH-HHHhcCCCCCCCCC-HHHHHHHHhC-CCCCCCcc----cCCHHHHHHHHHHcccCccc
Confidence            87653 444588887543322 2222 344443221 1112222222 11111111    12345667778888877776


Q ss_pred             CC
Q psy9184         561 EM  562 (562)
Q Consensus       561 ~~  562 (562)
                      |+
T Consensus       247 Rp  248 (260)
T cd05073         247 RP  248 (260)
T ss_pred             Cc
Confidence            63

Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa

>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1

Probab=99.88  E-value=4.1e-22  Score=197.93  Aligned_cols=227  Identities=19%  Similarity=0.217  Sum_probs=161.9

Q ss_pred             CCceeeeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCcccccc
Q psy9184         262 ALKNCKKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTELL  335 (562)
Q Consensus       262 ~y~~~~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~l~  335 (562)
                      +|++.+.||+|+||.||++      +.||+|.+.....      .......+.+|+.+++.++|                
T Consensus         1 ~y~~~~~lg~g~~g~~~~~~~~~~~~~~~ik~~~~~~~------~~~~~~~~~~e~~~l~~l~~----------------   58 (256)
T cd08218           1 KYVKVKKIGEGSFGKAILVKSKEDGKQYVIKEINISKM------SPKEREESRKEVAVLSNMKH----------------   58 (256)
T ss_pred             CceEEEEeccCCceEEEEEEEcCCCCEEEEEEEEhHhC------ChHHHHHHHHHHHHHHhCCC----------------
Confidence            4889999999999999998      7899999886421      12334578899999999998                


Q ss_pred             cccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc-----cCCHHHHHHHHHHHHHHHH
Q psy9184         336 KCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK-----YRSPNQTYAMILQVVFSLA  410 (562)
Q Consensus       336 ~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~-----~l~e~~i~~I~~QIl~aL~  410 (562)
                                |||+++++.+..             .+..|+||||+.+|++.+.+.     .+++.++..++.|++.||.
T Consensus        59 ----------~~i~~~~~~~~~-------------~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~  115 (256)
T cd08218          59 ----------PNIVQYQESFEE-------------NGNLYIVMDYCEGGDLYKKINAQRGVLFPEDQILDWFVQICLALK  115 (256)
T ss_pred             ----------CCeeeeEeeecC-------------CCeEEEEEecCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHH
Confidence                      999999988865             568999999999998876653     3688999999999999999


Q ss_pred             HHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecCC-----cEEEeecCCCccccC
Q psy9184         411 VAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVGE-----KICYYDLSQDEELFE  485 (562)
Q Consensus       411 yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~~-----g~v~~~l~~~pelF~  485 (562)
                      |||+ .+++|+||+|+|||++.++                    .++|+|||++......     .+.....|.+||.+.
T Consensus       116 ~lh~-~~i~h~~l~~~nil~~~~~--------------------~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~  174 (256)
T cd08218         116 HVHD-RKILHRDIKSQNIFLTKDG--------------------TIKLGDFGIARVLNSTVELARTCIGTPYYLSPEICE  174 (256)
T ss_pred             HHHh-CCEecCCCCHHHEEEcCCC--------------------CEEEeeccceeecCcchhhhhhccCCccccCHHHhC
Confidence            9999 7999999999999998876                    6999999999876542     233455688899876


Q ss_pred             C-CCCcHHHHHHHhhcccCCCCCCCCCCChhhhHHHHHHHHhhcccCCCCCCCchhHHHHHHHHHHHhcCCCcCcCC
Q psy9184         486 G-EGDYQFDMYRMMRKQCQNNWQNFTPKNNVFWIHYLVDKATCLKKGYQYLRAPRHQAFELLEELGQNALHFDSCYE  561 (562)
Q Consensus       486 g-~~~~q~dIy~lm~~~~~~~W~~~~P~tn~~wl~yl~~~Ll~~~~~~~~~~~~~~~~~~~l~~l~~~~l~~~s~~~  561 (562)
                      + ......|+|+..-... ..+.+..|+.+.. ........+. +. ++...   ...-..+..+..+++..+...|
T Consensus       175 ~~~~~~~~Dv~slG~i~~-~l~~g~~~~~~~~-~~~~~~~~~~-~~-~~~~~---~~~~~~~~~li~~~l~~~p~~R  244 (256)
T cd08218         175 NRPYNNKSDIWALGCVLY-EMCTLKHAFEAGN-MKNLVLKIIR-GS-YPPVS---SHYSYDLRNLVSQLFKRNPRDR  244 (256)
T ss_pred             CCCCCCccchhHHHHHHH-HHHcCCCCccCCC-HHHHHHHHhc-CC-CCCCc---ccCCHHHHHHHHHHhhCChhhC
Confidence            5 3445578887532222 3334444443222 1112222222 11 11111   1113456677777777666554

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti

>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase

Probab=99.88  E-value=2.2e-22  Score=203.24  Aligned_cols=231  Identities=15%  Similarity=0.130  Sum_probs=159.7

Q ss_pred             CCCCceeeeeeccCceEEEEE-----------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCC
Q psy9184         260 SSALKNCKKIGEGVYGEVFKL-----------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENST  328 (562)
Q Consensus       260 ~~~y~~~~~LG~GsfG~Vyka-----------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~  328 (562)
                      ...|++.+.||+|+||.||+|           ..||+|.+....       .......+.+|+.+++.++|         
T Consensus         5 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~v~ik~~~~~~-------~~~~~~~~~~e~~~l~~l~~---------   68 (277)
T cd05036           5 RDSITLLRALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESC-------SEQDESDFLMEALIMSKFNH---------   68 (277)
T ss_pred             HHHcEeeeECCCCCCCcEEEEEEecCCCCCCceeEEEEEcCCCC-------CHHHHHHHHHHHHHHHhCCC---------
Confidence            467899999999999999999           258888876432       12333568899999999998         


Q ss_pred             CcccccccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc----------cCCHHHH
Q psy9184         329 PCFTELLKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK----------YRSPNQT  398 (562)
Q Consensus       329 p~fv~l~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~----------~l~e~~i  398 (562)
                                       +||+++++++.+             .+..|+||||+.||++.+.+.          .+++..+
T Consensus        69 -----------------~~i~~~~~~~~~-------------~~~~~lv~e~~~g~~L~~~i~~~~~~~~~~~~~~~~~~  118 (277)
T cd05036          69 -----------------QNIVRLIGVSFE-------------RLPRFILLELMAGGDLKSFLRENRPRPERPSSLTMKDL  118 (277)
T ss_pred             -----------------CCEeeEEEEEcc-------------CCCcEEEEecCCCCCHHHHHHHhCCCCCCCCCCCHHHH
Confidence                             999999988764             447899999999998876542          3788999


Q ss_pred             HHHHHHHHHHHHHHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecCCc------E
Q psy9184         399 YAMILQVVFSLAVAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVGEK------I  472 (562)
Q Consensus       399 ~~I~~QIl~aL~yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~~g------~  472 (562)
                      ..++.||+.||.|||+ .+++||||||+|||++..+..                 ..+||+|||+++......      .
T Consensus       119 ~~~~~qi~~~l~~LH~-~~ivH~dlkp~nil~~~~~~~-----------------~~~kl~dfg~~~~~~~~~~~~~~~~  180 (277)
T cd05036         119 LFCARDVAKGCKYLEE-NHFIHRDIAARNCLLTCKGPG-----------------RVAKIADFGMARDIYRASYYRKGGR  180 (277)
T ss_pred             HHHHHHHHHHHHHHHH-CCEeecccchheEEEeccCCC-----------------cceEeccCccccccCCccceecCCC
Confidence            9999999999999999 799999999999999876421                 268999999998763211      1


Q ss_pred             -EEeecCCCccccCC-CCCcHHHHHHHhhcccCCCCC-CCCCCChhhhHHHHHHHHhhcccCCCCCCCchhHHHHHHHHH
Q psy9184         473 -CYYDLSQDEELFEG-EGDYQFDMYRMMRKQCQNNWQ-NFTPKNNVFWIHYLVDKATCLKKGYQYLRAPRHQAFELLEEL  549 (562)
Q Consensus       473 -v~~~l~~~pelF~g-~~~~q~dIy~lm~~~~~~~W~-~~~P~tn~~wl~yl~~~Ll~~~~~~~~~~~~~~~~~~~l~~l  549 (562)
                       .....|++||.+.+ ..+...|||++.-. ....+. +..|+.... ..-+...... ......+.    ..-..+.+|
T Consensus       181 ~~~~~~y~aPE~~~~~~~~~~~DiwslG~i-l~el~~~g~~pf~~~~-~~~~~~~~~~-~~~~~~~~----~~~~~~~~~  253 (277)
T cd05036         181 AMLPIKWMPPEAFLDGIFTSKTDVWSFGVL-LWEIFSLGYMPYPGRT-NQEVMEFVTG-GGRLDPPK----GCPGPVYRI  253 (277)
T ss_pred             CCccHhhCCHHHHhcCCcCchhHHHHHHHH-HHHHHcCCCCCCCCCC-HHHHHHHHHc-CCcCCCCC----CCCHHHHHH
Confidence             11235788998765 45667999886433 222222 444543321 1112222222 11111111    112356677


Q ss_pred             HHhcCCCcCcCC
Q psy9184         550 GQNALHFDSCYE  561 (562)
Q Consensus       550 ~~~~l~~~s~~~  561 (562)
                      ...++..+...|
T Consensus       254 i~~cl~~~p~~R  265 (277)
T cd05036         254 MTDCWQHTPEDR  265 (277)
T ss_pred             HHHHcCCCcccC
Confidence            788887776665

Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well

>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3

Probab=99.88  E-value=3.1e-22  Score=200.73  Aligned_cols=192  Identities=19%  Similarity=0.246  Sum_probs=148.0

Q ss_pred             CCceeeeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCcccccc
Q psy9184         262 ALKNCKKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTELL  335 (562)
Q Consensus       262 ~y~~~~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~l~  335 (562)
                      +|+..+.||+|+||.||+|      ..||+|++......   ....+....+.+|+.+++.++|                
T Consensus         3 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~---~~~~~~~~~~~~e~~~l~~l~h----------------   63 (266)
T cd06651           3 NWRRGKLLGQGAFGRVYLCYDVDTGRELAAKQVQFDPES---PETSKEVSALECEIQLLKNLQH----------------   63 (266)
T ss_pred             CccccceecCCCCEEEEEEEEcCCCcEEEEEEeecCcCC---chhHHHHHHHHHHHHHHHHcCC----------------
Confidence            5788999999999999999      68999998764311   1223445678899999999998                


Q ss_pred             cccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc---cCCHHHHHHHHHHHHHHHHHH
Q psy9184         336 KCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK---YRSPNQTYAMILQVVFSLAVA  412 (562)
Q Consensus       336 ~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~---~l~e~~i~~I~~QIl~aL~yL  412 (562)
                                |||+++++.+....           ...++++|||++++++.+.+.   .+++..++.++.||+.||.||
T Consensus        64 ----------~~i~~~~~~~~~~~-----------~~~~~l~~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~L  122 (266)
T cd06651          64 ----------ERIVQYYGCLRDRA-----------EKTLTIFMEYMPGGSVKDQLKAYGALTESVTRKYTRQILEGMSYL  122 (266)
T ss_pred             ----------CCeeeEEEEEEcCC-----------CCEEEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHH
Confidence                      99999998876421           457899999999988766553   478999999999999999999


Q ss_pred             HhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecC----C----cEEEeecCCCcccc
Q psy9184         413 EVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVG----E----KICYYDLSQDEELF  484 (562)
Q Consensus       413 H~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~----~----g~v~~~l~~~pelF  484 (562)
                      |+ ++|+||||||+||+++.++                    .++|+|||+++....    .    ....+..|.+||.+
T Consensus       123 H~-~~i~H~~l~p~nil~~~~~--------------------~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~  181 (266)
T cd06651         123 HS-NMIVHRDIKGANILRDSAG--------------------NVKLGDFGASKRLQTICMSGTGIRSVTGTPYWMSPEVI  181 (266)
T ss_pred             Hh-CCeeeCCCCHHHEEECCCC--------------------CEEEccCCCccccccccccCCccccCCccccccCHHHh
Confidence            99 7999999999999998775                    799999999986532    1    12234568899988


Q ss_pred             CCC-CCcHHHHHHHhhcccCCCCCCCCCCChh
Q psy9184         485 EGE-GDYQFDMYRMMRKQCQNNWQNFTPKNNV  515 (562)
Q Consensus       485 ~g~-~~~q~dIy~lm~~~~~~~W~~~~P~tn~  515 (562)
                      .+. .+...|+|+.. ......+.+..|+...
T Consensus       182 ~~~~~~~~~Dv~slG-~i~~el~~g~~pf~~~  212 (266)
T cd06651         182 SGEGYGRKADVWSLG-CTVVEMLTEKPPWAEY  212 (266)
T ss_pred             CCCCCCchhhhHHHH-HHHHHHHHCCCCcccc
Confidence            764 34568998753 3333455556666444

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development

>PHA03211 serine/threonine kinase US3; Provisional

Probab=99.88  E-value=1.2e-22  Score=221.91  Aligned_cols=167  Identities=16%  Similarity=0.113  Sum_probs=137.8

Q ss_pred             CCCCCCceeeeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCcc
Q psy9184         258 YPSSALKNCKKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCF  331 (562)
Q Consensus       258 ~~~~~y~~~~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~f  331 (562)
                      .....|.+.+.||+|+||.||+|      +.||||....              ..+.+|+.++++|+|            
T Consensus       166 ~~~~gy~i~~~Lg~G~~G~Vy~a~~~~~~~~vavK~~~~--------------~~~~~E~~iL~~L~H------------  219 (461)
T PHA03211        166 VAGLGFAIHRALTPGSEGCVFESSHPDYPQRVVVKAGWY--------------ASSVHEARLLRRLSH------------  219 (461)
T ss_pred             cccCCeEEEEEEccCCCeEEEEEEECCCCCEEEEecccc--------------cCHHHHHHHHHHCCC------------
Confidence            34467999999999999999999      6799996432              234689999999998            


Q ss_pred             cccccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc----cCCHHHHHHHHHHHHH
Q psy9184         332 TELLKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK----YRSPNQTYAMILQVVF  407 (562)
Q Consensus       332 v~l~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~----~l~e~~i~~I~~QIl~  407 (562)
                                    +||+++++++..             ++..|+|||++. |+++..+.    .+++.+++.|+.||+.
T Consensus       220 --------------pnIv~l~~~~~~-------------~~~~~lv~e~~~-~~L~~~l~~~~~~l~~~~~~~i~~qi~~  271 (461)
T PHA03211        220 --------------PAVLALLDVRVV-------------GGLTCLVLPKYR-SDLYTYLGARLRPLGLAQVTAVARQLLS  271 (461)
T ss_pred             --------------CCCCcEEEEEEE-------------CCEEEEEEEccC-CCHHHHHHhcCCCCCHHHHHHHHHHHHH
Confidence                          999999988765             558899999996 56666553    3899999999999999


Q ss_pred             HHHHHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecC-------CcEEEeecCCC
Q psy9184         408 SLAVAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVG-------EKICYYDLSQD  480 (562)
Q Consensus       408 aL~yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~-------~g~v~~~l~~~  480 (562)
                      ||.|||+ .||+||||||+|||++..+                    .++|+|||+|+....       .+..++..|++
T Consensus       272 aL~yLH~-~gIvHrDLKP~NILl~~~~--------------------~vkL~DFGla~~~~~~~~~~~~~~~~GT~~Y~A  330 (461)
T PHA03211        272 AIDYIHG-EGIIHRDIKTENVLVNGPE--------------------DICLGDFGAACFARGSWSTPFHYGIAGTVDTNA  330 (461)
T ss_pred             HHHHHHH-CCEEECcCCHHHEEECCCC--------------------CEEEcccCCceecccccccccccccCCCcCCcC
Confidence            9999999 7999999999999998876                    699999999987643       13346778999


Q ss_pred             ccccCCC-CCcHHHHHHHhh
Q psy9184         481 EELFEGE-GDYQFDMYRMMR  499 (562)
Q Consensus       481 pelF~g~-~~~q~dIy~lm~  499 (562)
                      ||++.+. .+...|||++.-
T Consensus       331 PE~~~~~~~~~~sDvwSlGv  350 (461)
T PHA03211        331 PEVLAGDPYTPSVDIWSAGL  350 (461)
T ss_pred             HHHHcCCCCCchHHHHHHHH
Confidence            9998774 566789998643

>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1

Probab=99.88  E-value=1.5e-22  Score=204.14  Aligned_cols=171  Identities=20%  Similarity=0.356  Sum_probs=140.2

Q ss_pred             CCCceeeeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCccccc
Q psy9184         261 SALKNCKKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTEL  334 (562)
Q Consensus       261 ~~y~~~~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~l  334 (562)
                      +.|+..+.||+|+||.||+|      ..||+|++....       .....+.+.+|+.+++.++|               
T Consensus         4 ~~y~~~~~l~~g~~~~vy~~~~~~~~~~vaiK~~~~~~-------~~~~~~~~~~e~~~l~~l~h---------------   61 (277)
T cd06642           4 ELFTKLERIGKGSFGEVYKGIDNRTKEVVAIKIIDLEE-------AEDEIEDIQQEITVLSQCDS---------------   61 (277)
T ss_pred             HHHHHHHHhcCCCCeeEEEEEEcCCCeEEEEEEecccc-------chHHHHHHHHHHHHHHcCCC---------------
Confidence            34778899999999999999      689999987543       12344678899999999998               


Q ss_pred             ccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc--cCCHHHHHHHHHHHHHHHHHH
Q psy9184         335 LKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK--YRSPNQTYAMILQVVFSLAVA  412 (562)
Q Consensus       335 ~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~--~l~e~~i~~I~~QIl~aL~yL  412 (562)
                                 |||+++++.|..             ++..|+||||+.+|++.+.+.  .+++..+..++.||+.||.||
T Consensus        62 -----------~~i~~~~~~~~~-------------~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~i~~~l~~l  117 (277)
T cd06642          62 -----------PYITRYYGSYLK-------------GTKLWIIMEYLGGGSALDLLKPGPLEETYIATILREILKGLDYL  117 (277)
T ss_pred             -----------CccHhhhccccc-------------CCceEEEEEccCCCcHHHHhhcCCCCHHHHHHHHHHHHHHHHHH
Confidence                       999999988864             557999999999988766554  378999999999999999999


Q ss_pred             HhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecCCc-----EEEeecCCCccccCCC
Q psy9184         413 EVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVGEK-----ICYYDLSQDEELFEGE  487 (562)
Q Consensus       413 H~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~~g-----~v~~~l~~~pelF~g~  487 (562)
                      |+ .+|+|+||+|+||+++.++                    .++|+|||+++......     ......|.+||.+.+.
T Consensus       118 H~-~~ivH~dl~p~ni~i~~~~--------------------~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~  176 (277)
T cd06642         118 HS-ERKIHRDIKAANVLLSEQG--------------------DVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIKQS  176 (277)
T ss_pred             hc-CCeeccCCChheEEEeCCC--------------------CEEEccccccccccCcchhhhcccCcccccCHHHhCcC
Confidence            99 7999999999999998876                    69999999998755321     2335567899988774


Q ss_pred             -CCcHHHHHHHh
Q psy9184         488 -GDYQFDMYRMM  498 (562)
Q Consensus       488 -~~~q~dIy~lm  498 (562)
                       .+.+.|+|+..
T Consensus       177 ~~~~~~Dv~slG  188 (277)
T cd06642         177 AYDFKADIWSLG  188 (277)
T ss_pred             CCchhhhHHHHH
Confidence             45568998863

Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25

>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases

Probab=99.88  E-value=2.1e-22  Score=200.81  Aligned_cols=227  Identities=19%  Similarity=0.204  Sum_probs=153.7

Q ss_pred             eeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCccccccccccc
Q psy9184         267 KKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTELLKCSCV  340 (562)
Q Consensus       267 ~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~l~~~~iv  340 (562)
                      +.||+|+||.||+|      +.||+|+++...     .........+..|..++....+                     
T Consensus         2 ~~l~~g~~~~v~~a~~~~~~~~vavK~~~~~~-----~~~~~~~~~~~~e~~~~~~~~~---------------------   55 (260)
T cd05611           2 KPISKGAFGSVYLAKKRSTGDYFAIKVLKKSD-----MIAKNQVTNVKAERAIMMIQGE---------------------   55 (260)
T ss_pred             ccCCcCCCeeEEEEEecCCCCeEEEEEecchh-----hhHHHHHHHHHHHHHHHhhcCC---------------------
Confidence            57999999999999      689999987542     1112223344556555544433                     


Q ss_pred             CCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc---cCCHHHHHHHHHHHHHHHHHHHhhCC
Q psy9184         341 RGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK---YRSPNQTYAMILQVVFSLAVAEVELE  417 (562)
Q Consensus       341 ~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~---~l~e~~i~~I~~QIl~aL~yLH~~~~  417 (562)
                          |||++++++.+..             ++.+|++|||++||++...+.   .+++..+..++.||+.||.|||+ .+
T Consensus        56 ----~~~i~~~~~~~~~-------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~lH~-~~  117 (260)
T cd05611          56 ----SPYVAKLYYSFQS-------------KDYLYLVMEYLNGGDCASLIKTLGGLPEDWAKQYIAEVVLGVEDLHQ-RG  117 (260)
T ss_pred             ----CCCeeeeeeeEEc-------------CCeEEEEEeccCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHH-CC
Confidence                4999999998875             558999999999997766553   48899999999999999999999 79


Q ss_pred             eEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecCC-cEEEeecCCCccccCCCC-CcHHHHH
Q psy9184         418 FEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVGE-KICYYDLSQDEELFEGEG-DYQFDMY  495 (562)
Q Consensus       418 IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~~-g~v~~~l~~~pelF~g~~-~~q~dIy  495 (562)
                      |+||||+|+||+++.++                    .++|+|||+++..... .......|++||.+.+.. ....|+|
T Consensus       118 i~H~dl~p~nil~~~~~--------------------~~~l~dfg~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~  177 (260)
T cd05611         118 IIHRDIKPENLLIDQTG--------------------HLKLTDFGLSRNGLENKKFVGTPDYLAPETILGVGDDKMSDWW  177 (260)
T ss_pred             eecCCCCHHHeEECCCC--------------------cEEEeecccceeccccccCCCCcCccChhhhcCCCCcchhhhH
Confidence            99999999999999876                    7999999999875431 223345678999887753 5568998


Q ss_pred             HHhhcccCCCCCCCCCCChhhhHHHHHHHHhhcccCCCCCCCchhHHHHHHHHHHHhcCCCcCcCC
Q psy9184         496 RMMRKQCQNNWQNFTPKNNVFWIHYLVDKATCLKKGYQYLRAPRHQAFELLEELGQNALHFDSCYE  561 (562)
Q Consensus       496 ~lm~~~~~~~W~~~~P~tn~~wl~yl~~~Ll~~~~~~~~~~~~~~~~~~~l~~l~~~~l~~~s~~~  561 (562)
                      ++.-... ....+..|+....... +.+.+......++....  ...-..+.++..++|+++...|
T Consensus       178 slG~il~-~l~~g~~p~~~~~~~~-~~~~~~~~~~~~~~~~~--~~~~~~~~~~i~~~l~~~p~~R  239 (260)
T cd05611         178 SLGCVIF-EFLFGYPPFHAETPDA-VFDNILSRRINWPEEVK--EFCSPEAVDLINRLLCMDPAKR  239 (260)
T ss_pred             HHHHHHH-HHHHCCCCCCCCCHHH-HHHHHHhcccCCCCccc--ccCCHHHHHHHHHHccCCHHHc
Confidence            7543332 2334444543222111 11222221112221111  1123567788888888766554

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do

>KOG0986|consensus

Probab=99.88  E-value=1.7e-23  Score=218.39  Aligned_cols=186  Identities=18%  Similarity=0.166  Sum_probs=155.0

Q ss_pred             CCCceeeeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCccccc
Q psy9184         261 SALKNCKKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTEL  334 (562)
Q Consensus       261 ~~y~~~~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~l  334 (562)
                      ..|...++||+|+||+||-|      +.||.|.+.+..     ....+.....++|-.||++++.               
T Consensus       185 n~F~~~RvlGkGGFGEV~acqvraTGKMYAcKkL~KKR-----iKkr~ge~maLnEk~iL~kV~s---------------  244 (591)
T KOG0986|consen  185 NTFRVYRVLGKGGFGEVCACQVRATGKMYACKKLDKKR-----IKKRKGETMALNEKQILEKVSS---------------  244 (591)
T ss_pred             cceeeeEEEecccccceeEEEEecchhhHHHHHHHHHH-----HHHhhhhHHhhHHHHHHHHhcc---------------
Confidence            56788899999999999998      889999887654     2223334567899999999998               


Q ss_pred             ccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc-----cCCHHHHHHHHHHHHHHH
Q psy9184         335 LKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK-----YRSPNQTYAMILQVVFSL  409 (562)
Q Consensus       335 ~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~-----~l~e~~i~~I~~QIl~aL  409 (562)
                                 ++||.+-..|++             .+.+++||..|+||++-.++-     -|++..+..++.+|+.||
T Consensus       245 -----------~FiVslaYAfeT-------------kd~LClVLtlMNGGDLkfHiyn~g~~gF~e~ra~FYAAEi~cGL  300 (591)
T KOG0986|consen  245 -----------PFIVSLAYAFET-------------KDALCLVLTLMNGGDLKFHIYNHGNPGFDEQRARFYAAEIICGL  300 (591)
T ss_pred             -----------CcEEEEeeeecC-------------CCceEEEEEeecCCceeEEeeccCCCCCchHHHHHHHHHHHhhH
Confidence                       899999888876             569999999999998866553     289999999999999999


Q ss_pred             HHHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecC----CcEEEeecCCCccccC
Q psy9184         410 AVAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVG----EKICYYDLSQDEELFE  485 (562)
Q Consensus       410 ~yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~----~g~v~~~l~~~pelF~  485 (562)
                      .+||+ .+||.|||||+|||++..|                    ++.|+|.|||..+..    .|-++|..|||||+..
T Consensus       301 ehlH~-~~iVYRDLKPeNILLDd~G--------------------hvRISDLGLAvei~~g~~~~~rvGT~GYMAPEvl~  359 (591)
T KOG0986|consen  301 EHLHR-RRIVYRDLKPENILLDDHG--------------------HVRISDLGLAVEIPEGKPIRGRVGTVGYMAPEVLQ  359 (591)
T ss_pred             HHHHh-cceeeccCChhheeeccCC--------------------CeEeeccceEEecCCCCccccccCcccccCHHHHc
Confidence            99999 6999999999999999998                    899999999998875    3457889999999988


Q ss_pred             CC-CCcHHHHHHHhhcccCCCCCCCCCC
Q psy9184         486 GE-GDYQFDMYRMMRKQCQNNWQNFTPK  512 (562)
Q Consensus       486 g~-~~~q~dIy~lm~~~~~~~W~~~~P~  512 (562)
                      +. +++..|- ..+|-.++++..+..|+
T Consensus       360 ne~Y~~s~Dw-f~lGCllYemi~G~sPF  386 (591)
T KOG0986|consen  360 NEVYDFSPDW-FSLGCLLYEMIAGHSPF  386 (591)
T ss_pred             CCcccCCccH-HHHHhHHHHHHcccCch
Confidence            74 4544444 45666666777777776

>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4

Probab=99.88  E-value=8.2e-23  Score=207.02  Aligned_cols=232  Identities=18%  Similarity=0.168  Sum_probs=158.9

Q ss_pred             CCCceeeeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCccccc
Q psy9184         261 SALKNCKKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTEL  334 (562)
Q Consensus       261 ~~y~~~~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~l  334 (562)
                      ++|+..+.||+|+||.||++      +.+|+|.+.....       ......+.+|+.++.++..               
T Consensus         4 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~-------~~~~~~~~~e~~~l~~~~~---------------   61 (288)
T cd06616           4 EDLKDLGEIGRGAFGTVNKMLHKPSGTIMAVKRIRSTVD-------EKEQKRLLMDLDVVMRSSD---------------   61 (288)
T ss_pred             HHhHHHHHhCCCCceEEEEEEECCCCCEEEEEEehhccC-------hHHHHHHHHHHHHHHHhcC---------------
Confidence            46777899999999999998      7899999886431       2334578899999999973               


Q ss_pred             ccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCcc---cc-----ccCCHHHHHHHHHHHH
Q psy9184         335 LKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSG---DI-----KYRSPNQTYAMILQVV  406 (562)
Q Consensus       335 ~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~---~l-----~~l~e~~i~~I~~QIl  406 (562)
                                ||||+++++.+..             ++..|++|||+.+ ++..   .+     ..+++..+..++.|++
T Consensus        62 ----------~~~iv~~~~~~~~-------------~~~~~~~~e~~~~-~l~~l~~~~~~~~~~~l~~~~~~~i~~~i~  117 (288)
T cd06616          62 ----------CPYIVKFYGALFR-------------EGDCWICMELMDI-SLDKFYKYVYEVLKSVIPEEILGKIAVATV  117 (288)
T ss_pred             ----------CCCEeeeeeEEec-------------CCcEEEEEecccC-CHHHHHHHHHHhhcCCCCHHHHHHHHHHHH
Confidence                      3999999988764             4578999999864 2211   11     2488999999999999


Q ss_pred             HHHHHHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecC----CcEEEeecCCCcc
Q psy9184         407 FSLAVAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVG----EKICYYDLSQDEE  482 (562)
Q Consensus       407 ~aL~yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~----~g~v~~~l~~~pe  482 (562)
                      .||+|||+.++|+||||||+|||++.++                    .++|+|||+++....    .....+..|.+||
T Consensus       118 ~~l~~lh~~~~i~H~dlkp~Nil~~~~~--------------------~~kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE  177 (288)
T cd06616         118 KALNYLKEELKIIHRDVKPSNILLDRNG--------------------NIKLCDFGISGQLVDSIAKTRDAGCRPYMAPE  177 (288)
T ss_pred             HHHHHHhhcCCeeccCCCHHHEEEccCC--------------------cEEEeecchhHHhccCCccccccCccCccCHH
Confidence            9999999756999999999999999876                    799999999976543    1233456688999


Q ss_pred             ccCCC----CCcHHHHHHHhhcccCCCCCCCCCCChhh-hHHHHHHHHhhcccCCCCCCCchhHHHHHHHHHHHhcCCCc
Q psy9184         483 LFEGE----GDYQFDMYRMMRKQCQNNWQNFTPKNNVF-WIHYLVDKATCLKKGYQYLRAPRHQAFELLEELGQNALHFD  557 (562)
Q Consensus       483 lF~g~----~~~q~dIy~lm~~~~~~~W~~~~P~tn~~-wl~yl~~~Ll~~~~~~~~~~~~~~~~~~~l~~l~~~~l~~~  557 (562)
                      .+.+.    .+...|||++.-... ..+.+..|+.... ....+.. ... +....-...........+.+|...+++.+
T Consensus       178 ~~~~~~~~~~~~~~Di~slG~il~-el~~g~~p~~~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~l~~li~~~l~~~  254 (288)
T cd06616         178 RIDPSARDGYDVRSDVWSLGITLY-EVATGKFPYPKWNSVFDQLTQ-VVK-GDPPILSNSEEREFSPSFVNFINLCLIKD  254 (288)
T ss_pred             HhccccccCCcchhhhhHHHHHHH-HHHhCCCCchhcchHHHHHhh-hcC-CCCCcCCCcCCCccCHHHHHHHHHHccCC
Confidence            88765    345689988643322 2334444543221 1112211 111 11111111111123456778888888877


Q ss_pred             CcCC
Q psy9184         558 SCYE  561 (562)
Q Consensus       558 s~~~  561 (562)
                      ...|
T Consensus       255 p~~R  258 (288)
T cd06616         255 ESKR  258 (288)
T ss_pred             hhhC
Confidence            6654

Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates

>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6

Probab=99.88  E-value=1.2e-22  Score=208.31  Aligned_cols=182  Identities=18%  Similarity=0.280  Sum_probs=142.4

Q ss_pred             CCceeeeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCcccccc
Q psy9184         262 ALKNCKKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTELL  335 (562)
Q Consensus       262 ~y~~~~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~l~  335 (562)
                      .|.....||+|+||.||+|      ..||+|++....        ....+.+.+|+.+++.++|                
T Consensus        22 ~~~~~~~ig~g~~g~v~~~~~~~~~~~v~iK~~~~~~--------~~~~~~~~~e~~~l~~l~h----------------   77 (297)
T cd06659          22 LLENYIKIGEGSTGIVCIAREKHSGRQVAVKMMDLRK--------QQRRELLFNEVVIMRDYQH----------------   77 (297)
T ss_pred             hHHhhhhcCCCCceeEEEEEEcCCCCEEEEEEEEecc--------cchHHHHHHHHHHHHhCCC----------------
Confidence            3556678999999999999      789999987542        1223567899999999998                


Q ss_pred             cccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc--cCCHHHHHHHHHHHHHHHHHHH
Q psy9184         336 KCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK--YRSPNQTYAMILQVVFSLAVAE  413 (562)
Q Consensus       336 ~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~--~l~e~~i~~I~~QIl~aL~yLH  413 (562)
                                |||+++++.|..             ++..|++|||+++|++...+.  .+++..++.++.|++.||.|||
T Consensus        78 ----------p~i~~~~~~~~~-------------~~~~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~qi~~~L~~LH  134 (297)
T cd06659          78 ----------QNVVEMYKSYLV-------------GEELWVLMEFLQGGALTDIVSQTRLNEEQIATVCESVLQALCYLH  134 (297)
T ss_pred             ----------Cchhhhhhheee-------------CCeEEEEEecCCCCCHHHHHhhcCCCHHHHHHHHHHHHHHHHHHH
Confidence                      999999998875             568999999999887655443  4789999999999999999999


Q ss_pred             hhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecC-----CcEEEeecCCCccccCC-C
Q psy9184         414 VELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVG-----EKICYYDLSQDEELFEG-E  487 (562)
Q Consensus       414 ~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~-----~g~v~~~l~~~pelF~g-~  487 (562)
                      + .+|+||||||+|||++.++                    .++|+|||++.....     .....+..|++||.+.+ .
T Consensus       135 ~-~~ivH~dl~p~Nill~~~~--------------------~~kL~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~  193 (297)
T cd06659         135 S-QGVIHRDIKSDSILLTLDG--------------------RVKLSDFGFCAQISKDVPKRKSLVGTPYWMAPEVISRTP  193 (297)
T ss_pred             h-CCeecCCCCHHHeEEccCC--------------------cEEEeechhHhhcccccccccceecCccccCHHHHccCC
Confidence            9 7999999999999998876                    799999999875432     23345667899998876 3


Q ss_pred             CCcHHHHHHHhhcccCCCCCCCCCC
Q psy9184         488 GDYQFDMYRMMRKQCQNNWQNFTPK  512 (562)
Q Consensus       488 ~~~q~dIy~lm~~~~~~~W~~~~P~  512 (562)
                      .....|+|+.+-.. ...+.+..|+
T Consensus       194 ~~~~~Dv~slG~il-~el~~g~~p~  217 (297)
T cd06659         194 YGTEVDIWSLGIMV-IEMVDGEPPY  217 (297)
T ss_pred             CCchhhHHHHHHHH-HHHHhCCCCC
Confidence            45568998864332 2333344443

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i

>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases

Probab=99.88  E-value=3.3e-22  Score=201.07  Aligned_cols=175  Identities=19%  Similarity=0.211  Sum_probs=138.8

Q ss_pred             CCCceeeeeeccCceEEEEE----------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCc
Q psy9184         261 SALKNCKKIGEGVYGEVFKL----------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPC  330 (562)
Q Consensus       261 ~~y~~~~~LG~GsfG~Vyka----------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~  330 (562)
                      .+|++.+.||+|+||.||+|          ..+|+|++....     .  ......+.+|+.+++.+.|           
T Consensus         4 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~~~avK~~~~~~-----~--~~~~~~~~~ei~~l~~l~~-----------   65 (284)
T cd05038           4 RHLKFIKQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSG-----E--EQHRSDFEREIEILRTLDH-----------   65 (284)
T ss_pred             hhchhheeeccCCCeeEEEeeecCCCCCCceEEEEEEecccc-----c--hHHHHHHHHHHHHHHhCCC-----------
Confidence            56888899999999999998          479999998653     1  1345678999999999988           


Q ss_pred             ccccccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc----cCCHHHHHHHHHHHH
Q psy9184         331 FTELLKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK----YRSPNQTYAMILQVV  406 (562)
Q Consensus       331 fv~l~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~----~l~e~~i~~I~~QIl  406 (562)
                                     |||+++++++...           .....+++|||+++|++.+.+.    .+++..+..++.||+
T Consensus        66 ---------------~~i~~~~~~~~~~-----------~~~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~l~  119 (284)
T cd05038          66 ---------------ENIVKYKGVCEKP-----------GGRSLRLIMEYLPSGSLRDYLQRHRDQINLKRLLLFSSQIC  119 (284)
T ss_pred             ---------------CChheEEeeeecC-----------CCCceEEEEecCCCCCHHHHHHhCccccCHHHHHHHHHHHH
Confidence                           9999998877542           1457899999999998766664    388999999999999


Q ss_pred             HHHHHHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecCCc--------EEEeecC
Q psy9184         407 FSLAVAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVGEK--------ICYYDLS  478 (562)
Q Consensus       407 ~aL~yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~~g--------~v~~~l~  478 (562)
                      .||+|||+ .||+||||||+|||++.++                    .++|+|||++.......        ......|
T Consensus       120 ~aL~~lH~-~~i~H~dl~p~nil~~~~~--------------------~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~  178 (284)
T cd05038         120 KGMDYLGS-QRYIHRDLAARNILVESED--------------------LVKISDFGLAKVLPEDKDYYYVKEPGESPIFW  178 (284)
T ss_pred             HHHHHHHh-CCeecCCCCHHhEEEcCCC--------------------CEEEcccccccccccCCcceeccCCCCCcccc
Confidence            99999999 7999999999999999876                    79999999998765211        1112236


Q ss_pred             CCccccCC-CCCcHHHHHHHhhc
Q psy9184         479 QDEELFEG-EGDYQFDMYRMMRK  500 (562)
Q Consensus       479 ~~pelF~g-~~~~q~dIy~lm~~  500 (562)
                      .+||.+.+ ......|||+++-.
T Consensus       179 ~~Pe~~~~~~~~~~~Di~slG~~  201 (284)
T cd05038         179 YAPECLRTSKFSSASDVWSFGVT  201 (284)
T ss_pred             cCcHHHccCCCCcccchHHHhhh
Confidence            77886654 34556899886433

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut

>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase

Probab=99.88  E-value=6.3e-22  Score=198.67  Aligned_cols=170  Identities=20%  Similarity=0.215  Sum_probs=136.6

Q ss_pred             CCCceeeeeeccCceEEEEE---------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCcc
Q psy9184         261 SALKNCKKIGEGVYGEVFKL---------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCF  331 (562)
Q Consensus       261 ~~y~~~~~LG~GsfG~Vyka---------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~f  331 (562)
                      .+|.+.++||+|+||.||+|         ..+|+|......       .....+.+.+|+.+++.++|            
T Consensus         6 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~v~ik~~~~~~-------~~~~~~~~~~e~~~l~~~~h------------   66 (270)
T cd05056           6 EDITLGRCIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCT-------SPSVREKFLQEAYIMRQFDH------------   66 (270)
T ss_pred             hhceeeeeeCCccceeEEEEEEecCCCCCcceEEEecCCcC-------CHHHHHHHHHHHHHHHhCCC------------
Confidence            56888999999999999999         258899887542       13345678899999999998            


Q ss_pred             cccccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc----cCCHHHHHHHHHHHHH
Q psy9184         332 TELLKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK----YRSPNQTYAMILQVVF  407 (562)
Q Consensus       332 v~l~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~----~l~e~~i~~I~~QIl~  407 (562)
                                    |||+++++++.+              +..|+||||+++|++.+.+.    .+++..+..++.||+.
T Consensus        67 --------------~~i~~~~~~~~~--------------~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~l~~  118 (270)
T cd05056          67 --------------PHIVKLIGVITE--------------NPVWIVMELAPLGELRSYLQVNKYSLDLASLILYSYQLST  118 (270)
T ss_pred             --------------CchhceeEEEcC--------------CCcEEEEEcCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHH
Confidence                          999999987753              35789999999998876654    3789999999999999


Q ss_pred             HHHHHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecCCcE------EEeecCCCc
Q psy9184         408 SLAVAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVGEKI------CYYDLSQDE  481 (562)
Q Consensus       408 aL~yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~~g~------v~~~l~~~p  481 (562)
                      ||.|||+ .+++||||||+|||++..+                    .++|+|||+++.......      .....|++|
T Consensus       119 ~l~~lH~-~~~~H~dl~p~nili~~~~--------------------~~~l~d~g~~~~~~~~~~~~~~~~~~~~~y~aP  177 (270)
T cd05056         119 ALAYLES-KRFVHRDIAARNVLVSSPD--------------------CVKLGDFGLSRYLEDESYYKASKGKLPIKWMAP  177 (270)
T ss_pred             HHHHHHh-CCeeccccChheEEEecCC--------------------CeEEccCceeeecccccceecCCCCccccccCh
Confidence            9999999 7999999999999999876                    799999999987644211      112357889


Q ss_pred             cccCCC-CCcHHHHHHHh
Q psy9184         482 ELFEGE-GDYQFDMYRMM  498 (562)
Q Consensus       482 elF~g~-~~~q~dIy~lm  498 (562)
                      |.+.+. .....|||++.
T Consensus       178 E~~~~~~~~~~~Di~slG  195 (270)
T cd05056         178 ESINFRRFTSASDVWMFG  195 (270)
T ss_pred             hhhccCCCCchhhhHHHH
Confidence            977653 44558998854

Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions

>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases

Probab=99.88  E-value=2.9e-22  Score=201.52  Aligned_cols=170  Identities=21%  Similarity=0.324  Sum_probs=142.7

Q ss_pred             CCceeeeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCcccccc
Q psy9184         262 ALKNCKKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTELL  335 (562)
Q Consensus       262 ~y~~~~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~l~  335 (562)
                      +|++.+.||.|+||.||+|      +.+|+|++....       .......+.+|+.+++.++|                
T Consensus         2 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~-------~~~~~~~~~~e~~~l~~l~h----------------   58 (274)
T cd06609           2 LFTLLECIGKGSFGEVYKAIDKRTNQVVAIKVIDLEE-------AEDEIEDIQQEIQFLSQCRS----------------   58 (274)
T ss_pred             hhhhhhhhcCCCCeEEEEEEECCCCeEEEEEEeeccc-------cchHHHHHHHHHHHHHHcCC----------------
Confidence            5788899999999999999      789999987642       12334567899999999998                


Q ss_pred             cccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc--cCCHHHHHHHHHHHHHHHHHHH
Q psy9184         336 KCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK--YRSPNQTYAMILQVVFSLAVAE  413 (562)
Q Consensus       336 ~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~--~l~e~~i~~I~~QIl~aL~yLH  413 (562)
                                ||++++++.+..             +..+|+|+||+.+|++.+.+.  .+++..++.++.|++.||.|||
T Consensus        59 ----------~~i~~~~~~~~~-------------~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~ql~~~l~~lh  115 (274)
T cd06609          59 ----------PYITKYYGSFLK-------------GSKLWIIMEYCGGGSCLDLLKPGKLDETYIAFILREVLLGLEYLH  115 (274)
T ss_pred             ----------CCeeeeeEEEEE-------------CCeEEEEEEeeCCCcHHHHHhhcCCCHHHHHHHHHHHHHHHHHHH
Confidence                      999999988865             458999999999998877765  4899999999999999999999


Q ss_pred             hhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecCC-----cEEEeecCCCccccCCC-
Q psy9184         414 VELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVGE-----KICYYDLSQDEELFEGE-  487 (562)
Q Consensus       414 ~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~~-----g~v~~~l~~~pelF~g~-  487 (562)
                      + .+|+||||+|+||+++.++                    .++|+|||+++.....     ....+..|.+||.+.+. 
T Consensus       116 ~-~~i~h~dl~p~ni~i~~~~--------------------~~~l~d~g~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~  174 (274)
T cd06609         116 E-EGKIHRDIKAANILLSEEG--------------------DVKLADFGVSGQLTSTMSKRNTFVGTPFWMAPEVIKQSG  174 (274)
T ss_pred             h-CCcccCCCCHHHEEECCCC--------------------CEEEcccccceeecccccccccccCCccccChhhhccCC
Confidence            9 7999999999999999986                    7999999999887642     23345568899987764 


Q ss_pred             CCcHHHHHHHh
Q psy9184         488 GDYQFDMYRMM  498 (562)
Q Consensus       488 ~~~q~dIy~lm  498 (562)
                      .+.+.|+|++.
T Consensus       175 ~~~~sDv~slG  185 (274)
T cd06609         175 YDEKADIWSLG  185 (274)
T ss_pred             CCchhhHHHHH
Confidence            45669998863

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)

>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases

Probab=99.88  E-value=3.5e-22  Score=201.03  Aligned_cols=166  Identities=22%  Similarity=0.200  Sum_probs=129.1

Q ss_pred             eeeeccCceEEEEE--------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCccccccccc
Q psy9184         267 KKIGEGVYGEVFKL--------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTELLKCS  338 (562)
Q Consensus       267 ~~LG~GsfG~Vyka--------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~l~~~~  338 (562)
                      +.||+|+||.||+|        ..+|+|.+....       .....+.+.+|+.+++++.+                   
T Consensus         1 ~~lg~g~~g~v~~~~~~~~~~~~~~~~k~~~~~~-------~~~~~~~~~~E~~~l~~l~~-------------------   54 (270)
T cd05047           1 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYA-------SKDDHRDFAGELEVLCKLGH-------------------   54 (270)
T ss_pred             CcCCCCCCceEEEEEEcCCCCeeEEEEEEccccC-------CHHHHHHHHHHHHHHHhhcc-------------------
Confidence            36899999999999        246888877432       23344678899999999954                   


Q ss_pred             ccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc-------------------cCCHHHHH
Q psy9184         339 CVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK-------------------YRSPNQTY  399 (562)
Q Consensus       339 iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~-------------------~l~e~~i~  399 (562)
                            ||||+++++.+..             .+.+|+||||+++|++.+.+.                   .+++.++.
T Consensus        55 ------h~~iv~~~~~~~~-------------~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~  115 (270)
T cd05047          55 ------HPNIINLLGACEH-------------RGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLL  115 (270)
T ss_pred             ------CCCeeeEEEEEec-------------CCCceEEEEeCCCCcHHHHHHhccccccccccccccCCcCCCCHHHHH
Confidence                  4999999998864             457899999999998766542                   26788999


Q ss_pred             HHHHHHHHHHHHHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecC----CcEEEe
Q psy9184         400 AMILQVVFSLAVAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVG----EKICYY  475 (562)
Q Consensus       400 ~I~~QIl~aL~yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~----~g~v~~  475 (562)
                      .++.|++.||+|||+ .|++||||||+|||++.++                    .++|+|||+++....    ......
T Consensus       116 ~~~~~i~~al~~lH~-~~i~H~dikp~nili~~~~--------------------~~kl~dfgl~~~~~~~~~~~~~~~~  174 (270)
T cd05047         116 HFAADVARGMDYLSQ-KQFIHRDLAARNILVGENY--------------------VAKIADFGLSRGQEVYVKKTMGRLP  174 (270)
T ss_pred             HHHHHHHHHHHHHHH-CCEeecccccceEEEcCCC--------------------eEEECCCCCccccchhhhccCCCCc
Confidence            999999999999999 7999999999999999876                    799999999864321    111113


Q ss_pred             ecCCCccccCC-CCCcHHHHHHHh
Q psy9184         476 DLSQDEELFEG-EGDYQFDMYRMM  498 (562)
Q Consensus       476 ~l~~~pelF~g-~~~~q~dIy~lm  498 (562)
                      ..|++||.+.+ ..+...|+|++.
T Consensus       175 ~~y~apE~~~~~~~~~~~Di~slG  198 (270)
T cd05047         175 VRWMAIESLNYSVYTTNSDVWSYG  198 (270)
T ss_pred             cccCChHHHccCCCCchhhHHHHH
Confidence            34788998765 345568998753

Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l

>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase

Probab=99.88  E-value=2.5e-22  Score=205.38  Aligned_cols=183  Identities=20%  Similarity=0.292  Sum_probs=144.5

Q ss_pred             CCCceeeeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCccccc
Q psy9184         261 SALKNCKKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTEL  334 (562)
Q Consensus       261 ~~y~~~~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~l  334 (562)
                      ++|.+.+.||.|+||.||++      ..||+|.+....        ....+.+.+|+.+++.+.|               
T Consensus        19 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~--------~~~~~~~~~e~~~l~~l~h---------------   75 (293)
T cd06647          19 KKYTRFEKIGQGASGTVYTAIDVATGQEVAIKQMNLQQ--------QPKKELIINEILVMRENKH---------------   75 (293)
T ss_pred             hhceeeeEecCCCCeEEEEEEEcCCCCEEEEEEecccc--------chHHHHHHHHHHHHhhcCC---------------
Confidence            67899999999999999999      679999986532        2233578899999999988               


Q ss_pred             ccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc--cCCHHHHHHHHHHHHHHHHHH
Q psy9184         335 LKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK--YRSPNQTYAMILQVVFSLAVA  412 (562)
Q Consensus       335 ~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~--~l~e~~i~~I~~QIl~aL~yL  412 (562)
                                 ||++++++.|..             .+..|+|+||+++|++.+.+.  .+++.++..++.|++.||.||
T Consensus        76 -----------p~i~~~~~~~~~-------------~~~~~lv~e~~~~~~L~~~~~~~~l~~~~~~~i~~~l~~al~~L  131 (293)
T cd06647          76 -----------PNIVNYLDSYLV-------------GDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQALEFL  131 (293)
T ss_pred             -----------CCeeehhheeee-------------CCcEEEEEecCCCCcHHHHHhhcCCCHHHHHHHHHHHHHHHHHH
Confidence                       999999988865             457899999999998776654  378999999999999999999


Q ss_pred             HhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecCC-----cEEEeecCCCccccCC-
Q psy9184         413 EVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVGE-----KICYYDLSQDEELFEG-  486 (562)
Q Consensus       413 H~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~~-----g~v~~~l~~~pelF~g-  486 (562)
                      |+ .|++||||||+||+++.++                    .++|+|||++......     ....+..|.+||.+.+ 
T Consensus       132 H~-~gi~H~dL~p~Nili~~~~--------------------~~kL~dfg~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~  190 (293)
T cd06647         132 HS-NQVIHRDIKSDNILLGMDG--------------------SVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRK  190 (293)
T ss_pred             Hh-CCEeeccCCHHHEEEcCCC--------------------CEEEccCcceecccccccccccccCChhhcCchhhccC
Confidence            99 7999999999999998876                    6999999998765432     2233455888997765 


Q ss_pred             CCCcHHHHHHHhhcccCCCCCCCCCC
Q psy9184         487 EGDYQFDMYRMMRKQCQNNWQNFTPK  512 (562)
Q Consensus       487 ~~~~q~dIy~lm~~~~~~~W~~~~P~  512 (562)
                      ..+.+.|+|+. |......+.+..|+
T Consensus       191 ~~~~~~Dv~sl-G~ll~~ll~g~~pf  215 (293)
T cd06647         191 AYGPKVDIWSL-GIMAIEMVEGEPPY  215 (293)
T ss_pred             CCCchhhHHHH-HHHHHHHHhCCCCC
Confidence            34556888875 33332333444444

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi

>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5

Probab=99.88  E-value=3.6e-22  Score=197.89  Aligned_cols=228  Identities=17%  Similarity=0.222  Sum_probs=162.4

Q ss_pred             CCceeeeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCcccccc
Q psy9184         262 ALKNCKKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTELL  335 (562)
Q Consensus       262 ~y~~~~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~l~  335 (562)
                      +|...+.||.|+||.||+|      ..+|+|.+.....      .....+.+.+|+.+++.++|                
T Consensus         1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~------~~~~~~~~~~E~~~l~~~~h----------------   58 (257)
T cd08225           1 RYEIIKKIGEGSFGKIYLAKAKSDSEHCVIKEIDLTKM------PVKEKEASKKEVILLAKMKH----------------   58 (257)
T ss_pred             CceEEEEecCCCcceEEEEEEcCCCceEEEEEeeHhhc------cchhhHHHHHHHHHHHhCCC----------------
Confidence            4788999999999999999      6799999876421      11233567889999999998                


Q ss_pred             cccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc-----cCCHHHHHHHHHHHHHHHH
Q psy9184         336 KCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK-----YRSPNQTYAMILQVVFSLA  410 (562)
Q Consensus       336 ~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~-----~l~e~~i~~I~~QIl~aL~  410 (562)
                                +||+++++.+..             ++..|+++||+.++++.+.+.     .+++..+..++.||+.||.
T Consensus        59 ----------~~i~~~~~~~~~-------------~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~  115 (257)
T cd08225          59 ----------PNIVTFFASFQE-------------NGRLFIVMEYCDGGDLMKRINRQRGVLFSEDQILSWFVQISLGLK  115 (257)
T ss_pred             ----------CChhhhhheecc-------------CCeEEEEEecCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHH
Confidence                      999999988864             558999999999998876653     2689999999999999999


Q ss_pred             HHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecCC-----cEEEeecCCCccccC
Q psy9184         411 VAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVGE-----KICYYDLSQDEELFE  485 (562)
Q Consensus       411 yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~~-----g~v~~~l~~~pelF~  485 (562)
                      |||+ .+|+|+||||+||+++.++.                   .++|+|||++......     .+..+..|.+||.+.
T Consensus       116 ~lh~-~~i~H~dl~~~nil~~~~~~-------------------~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~ape~~~  175 (257)
T cd08225         116 HIHD-RKILHRDIKSQNIFLSKNGM-------------------VAKLGDFGIARQLNDSMELAYTCVGTPYYLSPEICQ  175 (257)
T ss_pred             HHHH-CCcccccCCHHHEEEcCCCC-------------------eEEecccccchhccCCcccccccCCCccccCHHHHc
Confidence            9999 79999999999999988752                   5799999999876542     234456788999876


Q ss_pred             C-CCCcHHHHHHHhhcccCCCCCCCCCCChhhhHHHHHHHHhhcccCCCCCCCchhHHHHHHHHHHHhcCCCcCcCC
Q psy9184         486 G-EGDYQFDMYRMMRKQCQNNWQNFTPKNNVFWIHYLVDKATCLKKGYQYLRAPRHQAFELLEELGQNALHFDSCYE  561 (562)
Q Consensus       486 g-~~~~q~dIy~lm~~~~~~~W~~~~P~tn~~wl~yl~~~Ll~~~~~~~~~~~~~~~~~~~l~~l~~~~l~~~s~~~  561 (562)
                      + ..+.+.|+|+..-.. ...+.+..|+........+...+.. .  +.....   ..-..+.++...++..+...|
T Consensus       176 ~~~~~~~~Dv~slG~il-~~l~~g~~p~~~~~~~~~~~~~~~~-~--~~~~~~---~~~~~~~~~i~~~l~~~p~~R  245 (257)
T cd08225         176 NRPYNNKTDIWSLGCVL-YELCTLKHPFEGNNLHQLVLKICQG-Y--FAPISP---NFSRDLRSLISQLFKVSPRDR  245 (257)
T ss_pred             CCCCCchhhHHHHHHHH-HHHHhCCCCCCCccHHHHHHHHhcc-c--CCCCCC---CCCHHHHHHHHHHhccChhhC
Confidence            5 355668998863332 2233344454332222222222222 1  111111   112356777788887766554

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.

>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors

Probab=99.88  E-value=6.2e-22  Score=198.62  Aligned_cols=171  Identities=21%  Similarity=0.201  Sum_probs=136.7

Q ss_pred             CCCceeeeeeccCceEEEEE---------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCcc
Q psy9184         261 SALKNCKKIGEGVYGEVFKL---------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCF  331 (562)
Q Consensus       261 ~~y~~~~~LG~GsfG~Vyka---------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~f  331 (562)
                      .+|++.+.||+|+||.||+|         ..||||++....       .......+..|+.+++.++|            
T Consensus         4 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaiK~~~~~~-------~~~~~~~~~~e~~~l~~l~h------------   64 (269)
T cd05065           4 SCVKIEEVIGAGEFGEVCRGRLKLPGKREIFVAIKTLKSGY-------TEKQRRDFLSEASIMGQFDH------------   64 (269)
T ss_pred             HHeEEEeEecCCCCCeEEEEEEecCCCCceeEEEEEcCCCC-------CHHHHHHHHHHHHHHHhCCC------------
Confidence            45788999999999999999         259999987542       23345678999999999998            


Q ss_pred             cccccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc----cCCHHHHHHHHHHHHH
Q psy9184         332 TELLKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK----YRSPNQTYAMILQVVF  407 (562)
Q Consensus       332 v~l~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~----~l~e~~i~~I~~QIl~  407 (562)
                                    |||+++++.+..             +...++||||+.+|++.+.+.    .+++.+++.++.|++.
T Consensus        65 --------------~ni~~~~~~~~~-------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~l~~  117 (269)
T cd05065          65 --------------PNIIHLEGVVTK-------------SRPVMIITEFMENGALDSFLRQNDGQFTVIQLVGMLRGIAA  117 (269)
T ss_pred             --------------cCcceEEEEECC-------------CCceEEEEecCCCCcHHHHHhhCCCCCCHHHHHHHHHHHHH
Confidence                          999999988864             557899999999887755543    3788999999999999


Q ss_pred             HHHHHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecCCc----------EEEeec
Q psy9184         408 SLAVAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVGEK----------ICYYDL  477 (562)
Q Consensus       408 aL~yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~~g----------~v~~~l  477 (562)
                      ||.|||+ .|++||||||+|||++.++                    .++|+|||+++......          ......
T Consensus       118 al~~lH~-~g~~H~dl~p~nili~~~~--------------------~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~  176 (269)
T cd05065         118 GMKYLSE-MNYVHRDLAARNILVNSNL--------------------VCKVSDFGLSRFLEDDTSDPTYTSSLGGKIPIR  176 (269)
T ss_pred             HHHHHHH-CCEeecccChheEEEcCCC--------------------cEEECCCccccccccCccccccccccCCCccee
Confidence            9999999 7999999999999998775                    79999999987654311          111235


Q ss_pred             CCCccccCC-CCCcHHHHHHHh
Q psy9184         478 SQDEELFEG-EGDYQFDMYRMM  498 (562)
Q Consensus       478 ~~~pelF~g-~~~~q~dIy~lm  498 (562)
                      |++||.+.+ ..+...|+|++.
T Consensus       177 y~~PE~~~~~~~~~~~DvwslG  198 (269)
T cd05065         177 WTAPEAIAYRKFTSASDVWSYG  198 (269)
T ss_pred             ecCHhHhccCcccchhhhhhhH
Confidence            788998875 345568888753

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr

>KOG0584|consensus

Probab=99.88  E-value=2.2e-23  Score=225.19  Aligned_cols=180  Identities=18%  Similarity=0.240  Sum_probs=147.6

Q ss_pred             cCCCCCCc-eeeeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCC
Q psy9184         257 RYPSSALK-NCKKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTP  329 (562)
Q Consensus       257 ~~~~~~y~-~~~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p  329 (562)
                      ..+.++|. ...+||+|+|-+||+|      ..||-=.++....    ......++++..|+.+|+.|+|          
T Consensus        35 ~~p~gRy~k~~evLGrGafKtVYka~De~~giEVAWnqvk~~d~----~q~~~~leR~~~Ev~lLKsL~H----------  100 (632)
T KOG0584|consen   35 KDPTGRYLKFDEVLGRGAFKTVYKAFDEEEGIEVAWNQVKIRDV----TQSPEELERLYSEVHLLKSLKH----------  100 (632)
T ss_pred             cCCCCceeehhhhcccccceeeeeccccccchhhHHHHHhHHHh----hcChHHHHHHHHHHHHHccCCC----------
Confidence            34555663 4588999999999999      3444333332211    1234566899999999999999          


Q ss_pred             cccccccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc---cCCHHHHHHHHHHHH
Q psy9184         330 CFTELLKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK---YRSPNQTYAMILQVV  406 (562)
Q Consensus       330 ~fv~l~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~---~l~e~~i~~I~~QIl  406 (562)
                                      |||+++|++|.+..           ...+.+|.|++..|+|..+.+   .++...++.|++||+
T Consensus       101 ----------------~NIirfy~SW~d~~-----------n~~in~iTEL~TSGtLr~Y~kk~~~vn~kaik~W~RQIL  153 (632)
T KOG0584|consen  101 ----------------PNIIRFYDSWVDTD-----------NKTINFITELFTSGTLREYRKKHRRVNIKAIKSWCRQIL  153 (632)
T ss_pred             ----------------CceeeeeeheecCC-----------CceeeeeeecccCCcHHHHHHHhccCCHHHHHHHHHHHH
Confidence                            99999999998743           357889999999999977665   488999999999999


Q ss_pred             HHHHHHHhhCC--eEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecC---CcEEEeecCCCc
Q psy9184         407 FSLAVAEVELE--FEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVG---EKICYYDLSQDE  481 (562)
Q Consensus       407 ~aL~yLH~~~~--IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~---~g~v~~~l~~~p  481 (562)
                      .||.|||+ +.  |||||||.+||+|+.+..                   .|||+|+|||.....   ..|++|+-+|||
T Consensus       154 kGL~yLHs-~~PPIIHRDLKCDNIFinG~~G-------------------~VKIGDLGLAtl~r~s~aksvIGTPEFMAP  213 (632)
T KOG0584|consen  154 KGLVYLHS-QDPPIIHRDLKCDNIFVNGNLG-------------------EVKIGDLGLATLLRKSHAKSVIGTPEFMAP  213 (632)
T ss_pred             HHhhhhhc-CCCCccccccccceEEEcCCcC-------------------ceeecchhHHHHhhccccceeccCccccCh
Confidence            99999999 55  999999999999998753                   799999999987764   568999999999


Q ss_pred             cccCCCCCcHHHHHHH
Q psy9184         482 ELFEGEGDYQFDMYRM  497 (562)
Q Consensus       482 elF~g~~~~q~dIy~l  497 (562)
                      |+|...++...|||+-
T Consensus       214 EmYEE~YnE~VDVYaF  229 (632)
T KOG0584|consen  214 EMYEENYNELVDVYAF  229 (632)
T ss_pred             HHHhhhcchhhhhhhh
Confidence            9999888888999884

>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1

Probab=99.88  E-value=5e-22  Score=205.37  Aligned_cols=185  Identities=19%  Similarity=0.282  Sum_probs=144.2

Q ss_pred             CCCceeeeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCccccc
Q psy9184         261 SALKNCKKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTEL  334 (562)
Q Consensus       261 ~~y~~~~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~l  334 (562)
                      ..|...+.||+|+||.||++      ..+|+|++....     .........+.+|+.+++.++|               
T Consensus        25 ~~f~~~~~lg~G~~~~v~~~~~~~~~~~valK~~~~~~-----~~~~~~~~~~~~e~~~l~~l~h---------------   84 (317)
T cd06635          25 KLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSG-----KQSNEKWQDIIKEVKFLQRIKH---------------   84 (317)
T ss_pred             hhhhhhheeccCCCeEEEEEEEcCCCcEEEEEEEecCC-----CCchHHHHHHHHHHHHHHhCCC---------------
Confidence            44788899999999999999      689999987643     1223445678899999999998               


Q ss_pred             ccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc----cCCHHHHHHHHHHHHHHHH
Q psy9184         335 LKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK----YRSPNQTYAMILQVVFSLA  410 (562)
Q Consensus       335 ~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~----~l~e~~i~~I~~QIl~aL~  410 (562)
                                 ||++++++++..             +...|+||||+.| ++++.+.    .+++.++..++.||+.||.
T Consensus        85 -----------~~iv~~~~~~~~-------------~~~~~lv~e~~~g-~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~  139 (317)
T cd06635          85 -----------PNSIEYKGCYLR-------------EHTAWLVMEYCLG-SASDLLEVHKKPLQEVEIAAITHGALQGLA  139 (317)
T ss_pred             -----------CCEEEEEEEEee-------------CCeEEEEEeCCCC-CHHHHHHHhcCCCCHHHHHHHHHHHHHHHH
Confidence                       999999988865             4578999999974 5555442    3789999999999999999


Q ss_pred             HHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecC-CcEEEeecCCCccccC----
Q psy9184         411 VAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVG-EKICYYDLSQDEELFE----  485 (562)
Q Consensus       411 yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~-~g~v~~~l~~~pelF~----  485 (562)
                      |||+ .+|+||||+|+||+++.++                    .++|+|||++..... .....+..|.+||.+.    
T Consensus       140 ~lH~-~~i~H~dL~p~Nil~~~~~--------------------~~kl~dfg~~~~~~~~~~~~~~~~y~aPE~~~~~~~  198 (317)
T cd06635         140 YLHS-HNMIHRDIKAGNILLTEPG--------------------QVKLADFGSASIASPANSFVGTPYWMAPEVILAMDE  198 (317)
T ss_pred             HHHH-CCcccCCCCcccEEECCCC--------------------CEEEecCCCccccCCcccccCCccccChhhhhcCCC
Confidence            9999 7999999999999998876                    799999999876543 2233456788999864    


Q ss_pred             CCCCcHHHHHHHhhcccCCCCCCCCCC
Q psy9184         486 GEGDYQFDMYRMMRKQCQNNWQNFTPK  512 (562)
Q Consensus       486 g~~~~q~dIy~lm~~~~~~~W~~~~P~  512 (562)
                      +..+...|+|+. |......+.+..|+
T Consensus       199 ~~~~~~~Dv~sl-Gvil~el~~g~~p~  224 (317)
T cd06635         199 GQYDGKVDVWSL-GITCIELAERKPPL  224 (317)
T ss_pred             CCCCccccHHHH-HHHHHHHHhCCCCC
Confidence            234556899876 43333444555554

Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron

>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron

Probab=99.88  E-value=5.1e-22  Score=197.90  Aligned_cols=167  Identities=17%  Similarity=0.202  Sum_probs=129.7

Q ss_pred             eeeeccCceEEEEE---------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCcccccccc
Q psy9184         267 KKIGEGVYGEVFKL---------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTELLKC  337 (562)
Q Consensus       267 ~~LG~GsfG~Vyka---------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~l~~~  337 (562)
                      +.||+|+||.||+|         ..+|+|.+....       .....+.+.+|+.+++.++|                  
T Consensus         1 ~~lg~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~-------~~~~~~~~~~e~~~l~~l~h------------------   55 (262)
T cd05058           1 RVIGKGHFGCVYHGTLIDSDGQKIHCAVKSLNRIT-------DLEEVEQFLKEGIIMKDFSH------------------   55 (262)
T ss_pred             CcccccCCceEEEEEEecCCCceEEEEEEecCccC-------CHHHHHHHHHHHHHHccCCC------------------
Confidence            46899999999998         369999875422       23345678899999999998                  


Q ss_pred             cccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc----cCCHHHHHHHHHHHHHHHHHHH
Q psy9184         338 SCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK----YRSPNQTYAMILQVVFSLAVAE  413 (562)
Q Consensus       338 ~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~----~l~e~~i~~I~~QIl~aL~yLH  413 (562)
                              |||+++++.+..            .++..|++|||+.+|++...+.    .+++..+..++.||+.||+|||
T Consensus        56 --------~~iv~~~~~~~~------------~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH  115 (262)
T cd05058          56 --------PNVLSLLGICLP------------SEGSPLVVLPYMKHGDLRNFIRSETHNPTVKDLIGFGLQVAKGMEYLA  115 (262)
T ss_pred             --------CCcceEEEEeec------------CCCCcEEEEecCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH
Confidence                    999998886542            1346789999999998766553    2567788899999999999999


Q ss_pred             hhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecCC---------cEEEeecCCCcccc
Q psy9184         414 VELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVGE---------KICYYDLSQDEELF  484 (562)
Q Consensus       414 ~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~~---------g~v~~~l~~~pelF  484 (562)
                      + .+|+||||||+|||++.++                    .+||+|||+++.....         +...+..|++||.+
T Consensus       116 ~-~~i~H~dlk~~nili~~~~--------------------~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~  174 (262)
T cd05058         116 S-KKFVHRDLAARNCMLDESF--------------------TVKVADFGLARDIYDKEYYSVHNHTGAKLPVKWMALESL  174 (262)
T ss_pred             h-CCccccccCcceEEEcCCC--------------------cEEECCccccccccCCcceeecccccCcCCccccChhHh
Confidence            9 7999999999999998876                    7999999999865431         22223457889977


Q ss_pred             CC-CCCcHHHHHHHhh
Q psy9184         485 EG-EGDYQFDMYRMMR  499 (562)
Q Consensus       485 ~g-~~~~q~dIy~lm~  499 (562)
                      .+ ......|||++.-
T Consensus       175 ~~~~~~~~~Di~slG~  190 (262)
T cd05058         175 QTQKFTTKSDVWSFGV  190 (262)
T ss_pred             ccCccchHHHHHHHHH
Confidence            65 3455689988643

Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca

>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases

Probab=99.88  E-value=2e-22  Score=202.84  Aligned_cols=173  Identities=21%  Similarity=0.344  Sum_probs=138.1

Q ss_pred             CCceeeeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCcccccc
Q psy9184         262 ALKNCKKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTELL  335 (562)
Q Consensus       262 ~y~~~~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~l~  335 (562)
                      .|+..+.||.|+||.||+|      ..||+|.+....       .......+.+|+.+++.+.+..              
T Consensus         2 ~y~~~~~l~~g~~g~v~~~~~~~~~~~~~iK~~~~~~-------~~~~~~~~~~e~~~l~~l~~~~--------------   60 (277)
T cd06917           2 LYQRLELIGRGAYGAVYRGKHVPTGRVVALKIINLDT-------PDDDVSDIQREVALLSQLRQSQ--------------   60 (277)
T ss_pred             hhhhhhheeccCCceEEEEEEcCCCcEEEEEEecCCC-------CchhHHHHHHHHHHHHHhccCC--------------
Confidence            3778899999999999999      789999987542       1233456788999999997311              


Q ss_pred             cccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc--cCCHHHHHHHHHHHHHHHHHHH
Q psy9184         336 KCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK--YRSPNQTYAMILQVVFSLAVAE  413 (562)
Q Consensus       336 ~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~--~l~e~~i~~I~~QIl~aL~yLH  413 (562)
                               |||++++++.+..             +...|+||||++|+++.+.+.  .+++..+..++.|++.||.|||
T Consensus        61 ---------~~~vi~~~~~~~~-------------~~~~~lv~e~~~~~~L~~~~~~~~l~~~~~~~i~~~i~~~l~~lh  118 (277)
T cd06917          61 ---------PPNITKYYGSYLK-------------GPRLWIIMEYAEGGSVRTLMKAGPIAEKYISVIIREVLVALKYIH  118 (277)
T ss_pred             ---------CCCeeeEeeeeee-------------CCEEEEEEecCCCCcHHHHHHccCCCHHHHHHHHHHHHHHHHHHH
Confidence                     3999999988764             558999999999987765543  4789999999999999999999


Q ss_pred             hhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecCCc-----EEEeecCCCccccCCC-
Q psy9184         414 VELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVGEK-----ICYYDLSQDEELFEGE-  487 (562)
Q Consensus       414 ~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~~g-----~v~~~l~~~pelF~g~-  487 (562)
                      + .||+||||+|+||+++.++                    .++|+|||++.......     ..++..|.+||.+.+. 
T Consensus       119 ~-~~i~H~dl~p~ni~i~~~~--------------------~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~  177 (277)
T cd06917         119 K-VGVIHRDIKAANILVTNTG--------------------NVKLCDFGVAALLNQNSSKRSTFVGTPYWMAPEVITEGK  177 (277)
T ss_pred             h-CCcccCCcCHHHEEEcCCC--------------------CEEEccCCceeecCCCccccccccCCcceeCHHHhccCC
Confidence            9 7999999999999999876                    79999999998765422     2345567899987653 


Q ss_pred             -CCcHHHHHHHh
Q psy9184         488 -GDYQFDMYRMM  498 (562)
Q Consensus       488 -~~~q~dIy~lm  498 (562)
                       .....|+|++.
T Consensus       178 ~~~~~~Dv~slG  189 (277)
T cd06917         178 YYDTKADIWSLG  189 (277)
T ss_pred             ccccchhHHHHH
Confidence             34558888753

Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent

>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase

Probab=99.88  E-value=2e-22  Score=203.51  Aligned_cols=165  Identities=21%  Similarity=0.251  Sum_probs=132.8

Q ss_pred             eeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCcccccccccccCC
Q psy9184         269 IGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTELLKCSCVRG  342 (562)
Q Consensus       269 LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~l~~~~iv~g  342 (562)
                      ||+|+||.||+|      +.||+|++....     .........+.+|+.+++.++|                       
T Consensus         1 lg~g~~g~vy~~~~~~~~~~~~ik~~~~~~-----~~~~~~~~~~~~e~~~l~~l~~-----------------------   52 (277)
T cd05577           1 LGKGGFGEVCACQVKATGKMYACKKLDKKR-----LKKRKGEQMALNEKKILEKVSS-----------------------   52 (277)
T ss_pred             CCCCCceeEEEEEEcCCCcEEEEEEEehhh-----hhhhhhhHHHHHHHHHHHhCCC-----------------------
Confidence            699999999999      789999997642     1112234456789999999998                       


Q ss_pred             CCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc-----cCCHHHHHHHHHHHHHHHHHHHhhCC
Q psy9184         343 RYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK-----YRSPNQTYAMILQVVFSLAVAEVELE  417 (562)
Q Consensus       343 ~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~-----~l~e~~i~~I~~QIl~aL~yLH~~~~  417 (562)
                         |||+++++.|..             .+..|+||||+++|++.+.+.     .+++.++..++.|++.||.|||+ .|
T Consensus        53 ---~~i~~~~~~~~~-------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~ql~~~l~~lH~-~~  115 (277)
T cd05577          53 ---RFIVSLAYAFET-------------KDDLCLVMTLMNGGDLKYHIYNVGEPGFPEARAIFYAAQIICGLEHLHQ-RR  115 (277)
T ss_pred             ---CCEeeeeeEEec-------------CCeEEEEEecCCCCcHHHHHHHcCcCCCCHHHHHHHHHHHHHHHHHHHh-CC
Confidence               999999988865             558999999999987765542     48899999999999999999999 79


Q ss_pred             eEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecC----CcEEEeecCCCccccCCC-CCcHH
Q psy9184         418 FEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVG----EKICYYDLSQDEELFEGE-GDYQF  492 (562)
Q Consensus       418 IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~----~g~v~~~l~~~pelF~g~-~~~q~  492 (562)
                      ++||||+|+||+++.++                    .++|+|||+++....    ........|.+||.+.+. ...+.
T Consensus       116 i~H~di~p~Nil~~~~~--------------------~~~l~dfg~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~  175 (277)
T cd05577         116 IVYRDLKPENVLLDDHG--------------------NVRISDLGLAVELKGGKKIKGRAGTPGYMAPEVLQGEVYDFSV  175 (277)
T ss_pred             cccCCCCHHHEEECCCC--------------------CEEEccCcchhhhccCCccccccCCCCcCCHHHhcCCCCCchh
Confidence            99999999999999886                    699999999876542    223345567889987663 45568


Q ss_pred             HHHHHh
Q psy9184         493 DMYRMM  498 (562)
Q Consensus       493 dIy~lm  498 (562)
                      |+|++.
T Consensus       176 Di~slG  181 (277)
T cd05577         176 DWFALG  181 (277)
T ss_pred             hhHHHH
Confidence            998864

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of

>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2

Probab=99.88  E-value=7.1e-22  Score=197.79  Aligned_cols=171  Identities=22%  Similarity=0.227  Sum_probs=137.3

Q ss_pred             CCCceeeeeeccCceEEEEE---------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCcc
Q psy9184         261 SALKNCKKIGEGVYGEVFKL---------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCF  331 (562)
Q Consensus       261 ~~y~~~~~LG~GsfG~Vyka---------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~f  331 (562)
                      .+|...+.||+|+||.||+|         ..+|+|.+....       .....+.+.+|+.+++.++|            
T Consensus         5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~ik~~~~~~-------~~~~~~~~~~e~~~l~~l~h------------   65 (268)
T cd05063           5 SHITKQKVIGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGY-------TEKQRQDFLSEASIMGQFSH------------   65 (268)
T ss_pred             HHceEeeEecCCCCccEEEEEEecCCCCceEEEEEeccccC-------CHHHHHHHHHHHHHHhcCCC------------
Confidence            46788899999999999999         269999887542       23344678899999999998            


Q ss_pred             cccccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc----cCCHHHHHHHHHHHHH
Q psy9184         332 TELLKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK----YRSPNQTYAMILQVVF  407 (562)
Q Consensus       332 v~l~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~----~l~e~~i~~I~~QIl~  407 (562)
                                    ||++++++++..             .+..|+||||+.+|++.+.+.    .+++.++..++.|++.
T Consensus        66 --------------~~i~~~~~~~~~-------------~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~  118 (268)
T cd05063          66 --------------HNIIRLEGVVTK-------------FKPAMIITEYMENGALDKYLRDHDGEFSSYQLVGMLRGIAA  118 (268)
T ss_pred             --------------CCeeEEEEEEcc-------------CCCcEEEEEcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHH
Confidence                          999999988865             457899999999887755553    3789999999999999


Q ss_pred             HHHHHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecCCc-EE-------EeecCC
Q psy9184         408 SLAVAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVGEK-IC-------YYDLSQ  479 (562)
Q Consensus       408 aL~yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~~g-~v-------~~~l~~  479 (562)
                      ||+|||+ .+|+||||||+|||++.++                    .++|+|||+++...... ..       ....|+
T Consensus       119 al~~lH~-~~i~H~dlkp~Nili~~~~--------------------~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~  177 (268)
T cd05063         119 GMKYLSD-MNYVHRDLAARNILVNSNL--------------------ECKVSDFGLSRVLEDDPEGTYTTSGGKIPIRWT  177 (268)
T ss_pred             HHHHHHH-CCeeccccchhhEEEcCCC--------------------cEEECCCccceecccccccceeccCCCcCceec
Confidence            9999999 7999999999999998875                    79999999998764311 11       122478


Q ss_pred             CccccCC-CCCcHHHHHHHh
Q psy9184         480 DEELFEG-EGDYQFDMYRMM  498 (562)
Q Consensus       480 ~pelF~g-~~~~q~dIy~lm  498 (562)
                      +||.+.+ ..+...|+|++.
T Consensus       178 ~PE~~~~~~~~~~~Dv~slG  197 (268)
T cd05063         178 APEAIAYRKFTSASDVWSFG  197 (268)
T ss_pred             CHHHhhcCCcChHhHHHHHH
Confidence            8998765 345568998753

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored

>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases

Probab=99.88  E-value=3e-22  Score=202.98  Aligned_cols=172  Identities=21%  Similarity=0.272  Sum_probs=140.1

Q ss_pred             CCCceeeeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCccccc
Q psy9184         261 SALKNCKKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTEL  334 (562)
Q Consensus       261 ~~y~~~~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~l  334 (562)
                      ++|++.+.||+|+||.||++      ..||+|++....       .......+.+|+.+++.++|               
T Consensus         5 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~-------~~~~~~~~~~E~~~l~~l~h---------------   62 (284)
T cd06620           5 EDLETISDLGAGNGGSVSKVKHIPTGTVMAKKVVHIGA-------KSSVRKQILRELQIMHECRS---------------   62 (284)
T ss_pred             HHHHHHHHcCCCCCeEEEEEEEcCCCcEEEEEEEEecC-------cchHHHHHHHHHHHHHHcCC---------------
Confidence            56899999999999999998      689999987542       12334678899999999988               


Q ss_pred             ccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc---cCCHHHHHHHHHHHHHHHHH
Q psy9184         335 LKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK---YRSPNQTYAMILQVVFSLAV  411 (562)
Q Consensus       335 ~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~---~l~e~~i~~I~~QIl~aL~y  411 (562)
                                 |||+++++.+..             .+.+|+||||+++|++.+.+.   .+++..+..++.|++.||.|
T Consensus        63 -----------~~i~~~~~~~~~-------------~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~  118 (284)
T cd06620          63 -----------PYIVSFYGAFLN-------------ENNICMCMEFMDCGSLDRIYKKGGPIPVEILGKIAVAVVEGLTY  118 (284)
T ss_pred             -----------CCcceEeeeEec-------------CCEEEEEEecCCCCCHHHHHHhccCCCHHHHHHHHHHHHHHHHH
Confidence                       999999998875             468999999999987755443   47899999999999999999


Q ss_pred             HHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecC---CcEEEeecCCCccccCC-C
Q psy9184         412 AEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVG---EKICYYDLSQDEELFEG-E  487 (562)
Q Consensus       412 LH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~---~g~v~~~l~~~pelF~g-~  487 (562)
                      ||+.++|+||||||+||+++.++                    .++|+|||+++....   .....+..|++||.+.+ .
T Consensus       119 LH~~~~i~H~dl~p~nil~~~~~--------------------~~~l~d~gl~~~~~~~~~~~~~~~~~~~aPE~~~~~~  178 (284)
T cd06620         119 LYNVHRIMHRDIKPSNILVNSRG--------------------QIKLCDFGVSGELINSIADTFVGTSTYMSPERIQGGK  178 (284)
T ss_pred             HHHhcCeeccCCCHHHEEECCCC--------------------cEEEccCCcccchhhhccCccccCcccCCHHHHccCC
Confidence            99756899999999999998876                    799999999876432   12244667888998755 3


Q ss_pred             CCcHHHHHHHh
Q psy9184         488 GDYQFDMYRMM  498 (562)
Q Consensus       488 ~~~q~dIy~lm  498 (562)
                      .+...|||++.
T Consensus       179 ~~~~~Di~slG  189 (284)
T cd06620         179 YTVKSDVWSLG  189 (284)
T ss_pred             CCccchHHHHH
Confidence            44568888764

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase

Probab=99.88  E-value=2.7e-22  Score=199.98  Aligned_cols=229  Identities=19%  Similarity=0.177  Sum_probs=164.4

Q ss_pred             CCceeeeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCcccccc
Q psy9184         262 ALKNCKKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTELL  335 (562)
Q Consensus       262 ~y~~~~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~l~  335 (562)
                      +|+..+.||.|+||.||+|      +.+|+|.+....       .......+.+|+.+++.+.|                
T Consensus         2 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~~ik~~~~~~-------~~~~~~~~~~e~~~l~~~~~----------------   58 (265)
T cd06605           2 DLEYLGELGAGNSGVVSKVLHRPTGKIMAVKTIRLEI-------NEAIQKQILRELDILHKCNS----------------   58 (265)
T ss_pred             cchHHHHhcCCCCeEEEEEEEcCCCcEEEEEEEeccc-------ChHHHHHHHHHHHHHHHCCC----------------
Confidence            5778899999999999999      789999988653       12344678899999999998                


Q ss_pred             cccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc----cCCHHHHHHHHHHHHHHHHH
Q psy9184         336 KCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK----YRSPNQTYAMILQVVFSLAV  411 (562)
Q Consensus       336 ~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~----~l~e~~i~~I~~QIl~aL~y  411 (562)
                                |||+++++.+..             ++..|++|||+.++++.+.+.    .+++..+..++.|++.||+|
T Consensus        59 ----------~~i~~~~~~~~~-------------~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~  115 (265)
T cd06605          59 ----------PYIVGFYGAFYN-------------NGDISICMEYMDGGSLDKILKEVQGRIPERILGKIAVAVLKGLTY  115 (265)
T ss_pred             ----------Cchhhhheeeec-------------CCEEEEEEEecCCCcHHHHHHHccCCCCHHHHHHHHHHHHHHHHH
Confidence                      999999988865             468999999999887765553    47899999999999999999


Q ss_pred             HHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecCC---cEEEeecCCCccccCCC-
Q psy9184         412 AEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVGE---KICYYDLSQDEELFEGE-  487 (562)
Q Consensus       412 LH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~~---g~v~~~l~~~pelF~g~-  487 (562)
                      ||+..+++||||||+||+++.++                    .++|+|||++......   .......|++||.+.+. 
T Consensus       116 lH~~~~i~H~dl~~~ni~~~~~~--------------------~~~l~d~g~~~~~~~~~~~~~~~~~~y~~PE~~~~~~  175 (265)
T cd06605         116 LHEKHKIIHRDVKPSNILVNSRG--------------------QIKLCDFGVSGQLVNSLAKTFVGTSSYMAPERIQGND  175 (265)
T ss_pred             HcCCCCeecCCCCHHHEEECCCC--------------------CEEEeecccchhhHHHHhhcccCChhccCHHHHcCCC
Confidence            99944999999999999999876                    6999999998765431   13345568889987764 


Q ss_pred             CCcHHHHHHHhhcccCCCCCCCCCCChh----hhHHHHHHHHhhcccCCCCCCCchhHHHHHHHHHHHhcCCCcCcCC
Q psy9184         488 GDYQFDMYRMMRKQCQNNWQNFTPKNNV----FWIHYLVDKATCLKKGYQYLRAPRHQAFELLEELGQNALHFDSCYE  561 (562)
Q Consensus       488 ~~~q~dIy~lm~~~~~~~W~~~~P~tn~----~wl~yl~~~Ll~~~~~~~~~~~~~~~~~~~l~~l~~~~l~~~s~~~  561 (562)
                      .+...|+|++.-. ....+.+..|+...    ....-..+..+. ...   +.......-..+.+|+..++..++..|
T Consensus       176 ~~~~~Dv~slG~~-l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~-~~~---~~~~~~~~~~~~~~li~~~l~~~p~~R  248 (265)
T cd06605         176 YSVKSDIWSLGLS-LIELATGRFPYPPENDPPDGIFELLQYIVN-EPP---PRLPSGKFSPDFQDFVNLCLIKDPRER  248 (265)
T ss_pred             CCchhhHHHHHHH-HHHHHhCCCCCCccccccccHHHHHHHHhc-CCC---CCCChhhcCHHHHHHHHHHcCCCchhC
Confidence            5566999986433 22334444444221    111112233333 111   111111134467788888888777665

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity

>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3

Probab=99.88  E-value=1.3e-21  Score=197.51  Aligned_cols=171  Identities=22%  Similarity=0.314  Sum_probs=138.0

Q ss_pred             CCceeeeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCcccccc
Q psy9184         262 ALKNCKKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTELL  335 (562)
Q Consensus       262 ~y~~~~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~l~  335 (562)
                      +|+..++||+|+||.||+|      +.||+|++.....      .....+.+.+|+.+++.++|                
T Consensus         2 ~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~------~~~~~~~~~~e~~~l~~l~h----------------   59 (286)
T cd07846           2 KYENLGLVGEGSYGMVMKCKHKETGQIVAIKKFLESED------DKMVKKIAMREIRMLKQLRH----------------   59 (286)
T ss_pred             ceeEeeeeccCCCeEEEEEEECCCCCEEEEEeHhhccC------cchhhHHHHHHHHHHHhcCC----------------
Confidence            5889999999999999999      6899999875431      11233567789999999998                


Q ss_pred             cccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc---cCCHHHHHHHHHHHHHHHHHH
Q psy9184         336 KCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK---YRSPNQTYAMILQVVFSLAVA  412 (562)
Q Consensus       336 ~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~---~l~e~~i~~I~~QIl~aL~yL  412 (562)
                                |||+++++++..             ++..|+||||++++.+.....   .+++.++..++.||+.||+||
T Consensus        60 ----------~~i~~~~~~~~~-------------~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~L  116 (286)
T cd07846          60 ----------ENLVNLIEVFRR-------------KKRLYLVFEFVDHTVLDDLEKYPNGLDESRVRKYLFQILRGIEFC  116 (286)
T ss_pred             ----------cchhhHHHhccc-------------CCeEEEEEecCCccHHHHHHhccCCCCHHHHHHHHHHHHHHHHHH
Confidence                      999999999875             558999999999774433222   378999999999999999999


Q ss_pred             HhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecCC-----cEEEeecCCCccccCCC
Q psy9184         413 EVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVGE-----KICYYDLSQDEELFEGE  487 (562)
Q Consensus       413 H~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~~-----g~v~~~l~~~pelF~g~  487 (562)
                      |+ .+|+||||+|+||+++.++                    .++|+|||+++.....     ..+....|++||.+.+.
T Consensus       117 H~-~~i~h~~l~p~ni~~~~~~--------------------~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~  175 (286)
T cd07846         117 HS-HNIIHRDIKPENILVSQSG--------------------VVKLCDFGFARTLAAPGEVYTDYVATRWYRAPELLVGD  175 (286)
T ss_pred             HH-CCccccCCCHHHEEECCCC--------------------cEEEEeeeeeeeccCCccccCcccceeeccCcHHhccc
Confidence            99 7999999999999998876                    7999999999876432     23346678899988763


Q ss_pred             --CCcHHHHHHHh
Q psy9184         488 --GDYQFDMYRMM  498 (562)
Q Consensus       488 --~~~q~dIy~lm  498 (562)
                        .....|||+..
T Consensus       176 ~~~~~~~Dv~slG  188 (286)
T cd07846         176 TKYGRAVDIWAVG  188 (286)
T ss_pred             cccCchHhHHHHH
Confidence              34558998853

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI

>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3

Probab=99.88  E-value=1e-21  Score=198.41  Aligned_cols=170  Identities=21%  Similarity=0.362  Sum_probs=139.1

Q ss_pred             CCceeeeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCcccccc
Q psy9184         262 ALKNCKKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTELL  335 (562)
Q Consensus       262 ~y~~~~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~l~  335 (562)
                      -|+..+.||.|+||.||+|      ..+|+|++....       .......+.+|+.+++.++|                
T Consensus         5 ~~~~~~~ig~G~~~~vy~~~~~~~~~~~aiK~~~~~~-------~~~~~~~~~~e~~~l~~l~h----------------   61 (277)
T cd06641           5 LFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEE-------AEDEIEDIQQEITVLSQCDS----------------   61 (277)
T ss_pred             hhhhheeEeecCCeEEEEEEECCCCcEEEEEEecccc-------chHHHHHHHHHHHHHHhcCC----------------
Confidence            3678899999999999999      689999886542       12344678899999999998                


Q ss_pred             cccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc--cCCHHHHHHHHHHHHHHHHHHH
Q psy9184         336 KCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK--YRSPNQTYAMILQVVFSLAVAE  413 (562)
Q Consensus       336 ~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~--~l~e~~i~~I~~QIl~aL~yLH  413 (562)
                                |||+++++.|..             ++..|+||||+.+|++...+.  .+++..+..++.|++.||.|||
T Consensus        62 ----------~~iv~~~~~~~~-------------~~~~~lv~e~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~l~~lh  118 (277)
T cd06641          62 ----------PYVTKYYGSYLK-------------DTKLWIIMEYLGGGSALDLLEPGPLDETQIATILREILKGLDYLH  118 (277)
T ss_pred             ----------CCEeEEEEEEEe-------------CCeEEEEEEeCCCCcHHHHHhcCCCCHHHHHHHHHHHHHHHHHHc
Confidence                      999999998875             558999999999988776654  3889999999999999999999


Q ss_pred             hhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecCCc-----EEEeecCCCccccCCC-
Q psy9184         414 VELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVGEK-----ICYYDLSQDEELFEGE-  487 (562)
Q Consensus       414 ~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~~g-----~v~~~l~~~pelF~g~-  487 (562)
                      + .+++|+||||+||+++.++                    .++|+|||++.......     ...+..|.+||.+.+. 
T Consensus       119 ~-~~i~h~dl~p~Ni~i~~~~--------------------~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~  177 (277)
T cd06641         119 S-EKKIHRDIKAANVLLSEHG--------------------EVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIKQSA  177 (277)
T ss_pred             c-CCeecCCCCHHhEEECCCC--------------------CEEEeecccceecccchhhhccccCCccccChhhhccCC
Confidence            9 7999999999999998876                    69999999998765421     1235567889987663 


Q ss_pred             CCcHHHHHHHh
Q psy9184         488 GDYQFDMYRMM  498 (562)
Q Consensus       488 ~~~q~dIy~lm  498 (562)
                      .+.+.|+|++.
T Consensus       178 ~~~~~Dv~slG  188 (277)
T cd06641         178 YDSKADIWSLG  188 (277)
T ss_pred             CCchhhHHHHH
Confidence            45568888753

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int

>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3

Probab=99.88  E-value=5.6e-22  Score=200.22  Aligned_cols=183  Identities=19%  Similarity=0.263  Sum_probs=141.0

Q ss_pred             CCceeeeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCcccccc
Q psy9184         262 ALKNCKKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTELL  335 (562)
Q Consensus       262 ~y~~~~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~l~  335 (562)
                      +|+..+.||.|+||.||+|      ..||||.+.....      .......+.+|+.+++.++|                
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~------~~~~~~~~~~E~~~l~~l~h----------------   58 (284)
T cd07860           1 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTE------TEGVPSTAIREISLLKELNH----------------   58 (284)
T ss_pred             CceeeeeecCCCceEEEEEEECCCCCEEEEEEcccccc------ccccchHHHHHHHHHHhcCC----------------
Confidence            3788999999999999999      7899999876431      12223467889999999998                


Q ss_pred             cccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc-----cCCHHHHHHHHHHHHHHHH
Q psy9184         336 KCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK-----YRSPNQTYAMILQVVFSLA  410 (562)
Q Consensus       336 ~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~-----~l~e~~i~~I~~QIl~aL~  410 (562)
                                |||+++++++.+             ++..|+||||+. +++...+.     .+++..+..++.||+.||+
T Consensus        59 ----------~~i~~~~~~~~~-------------~~~~~~v~e~~~-~~l~~~~~~~~~~~l~~~~~~~~~~~i~~~l~  114 (284)
T cd07860          59 ----------PNIVKLLDVIHT-------------ENKLYLVFEFLH-QDLKKFMDASPLSGIPLPLIKSYLFQLLQGLA  114 (284)
T ss_pred             ----------CCCcchhhhccc-------------CCcEEEEeeccc-cCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHH
Confidence                      999999998875             558999999996 44544432     3789999999999999999


Q ss_pred             HHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecCC-----cEEEeecCCCccccC
Q psy9184         411 VAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVGE-----KICYYDLSQDEELFE  485 (562)
Q Consensus       411 yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~~-----g~v~~~l~~~pelF~  485 (562)
                      |||+ .+++||||+|+||+++.++                    .++|+|||+++.....     .......|.+||.+.
T Consensus       115 ~lh~-~~i~H~~l~p~nill~~~~--------------------~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~  173 (284)
T cd07860         115 FCHS-HRVLHRDLKPQNLLINTEG--------------------AIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILL  173 (284)
T ss_pred             HHHH-CCeecCCCCHHHEEECCCC--------------------CEEEeeccchhhcccCccccccccccccccCCeEEe
Confidence            9999 7999999999999999886                    7999999998765431     122345688999887


Q ss_pred             CCC--CcHHHHHHHhhcccCCCCCCCCCC
Q psy9184         486 GEG--DYQFDMYRMMRKQCQNNWQNFTPK  512 (562)
Q Consensus       486 g~~--~~q~dIy~lm~~~~~~~W~~~~P~  512 (562)
                      +..  ....|+|++. ......+.+..|+
T Consensus       174 ~~~~~~~~~Dv~slG-~il~~l~tg~~p~  201 (284)
T cd07860         174 GCKYYSTAVDIWSLG-CIFAEMVTRRALF  201 (284)
T ss_pred             cCCCCCcHHHHHHHH-HHHHHHHHCCCCC
Confidence            643  5568998863 3333333343343

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex

>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2

Probab=99.88  E-value=4.1e-22  Score=197.37  Aligned_cols=182  Identities=22%  Similarity=0.346  Sum_probs=146.5

Q ss_pred             CCCCceeeeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCcccc
Q psy9184         260 SSALKNCKKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTE  333 (562)
Q Consensus       260 ~~~y~~~~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~  333 (562)
                      .++|+..++||+|+||.||+|      ..+|+|.+....        .  .+.+.+|+.+++.++|              
T Consensus         2 ~~~y~~~~~i~~g~~~~v~~~~~~~~~~~~~~k~~~~~~--------~--~~~~~~e~~~~~~l~~--------------   57 (256)
T cd06612           2 EEVFDILEKLGEGSYGSVYKAIHKETGQVVAIKVVPVEE--------D--LQEIIKEISILKQCDS--------------   57 (256)
T ss_pred             cccchhhhhhcCCCCeEEEEEEEcCCCcEEEEEEeecHH--------H--HHHHHHHHHHHHhCCC--------------
Confidence            467999999999999999999      679999987542        1  5688899999999987              


Q ss_pred             cccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc----cCCHHHHHHHHHHHHHHH
Q psy9184         334 LLKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK----YRSPNQTYAMILQVVFSL  409 (562)
Q Consensus       334 l~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~----~l~e~~i~~I~~QIl~aL  409 (562)
                                  |||+++++.+..             +..+|++|||+.++++.+.+.    .+++..+..++.||+.||
T Consensus        58 ------------~~i~~~~~~~~~-------------~~~~~l~~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~l~~~l  112 (256)
T cd06612          58 ------------PYIVKYYGSYFK-------------NTDLWIVMEYCGAGSVSDIMKITNKTLTEEEIAAILYQTLKGL  112 (256)
T ss_pred             ------------CcEeeeeeeeec-------------CCcEEEEEecCCCCcHHHHHHhCccCCCHHHHHHHHHHHHHHH
Confidence                        999999998875             458999999999987766553    378999999999999999


Q ss_pred             HHHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecCCc-----EEEeecCCCcccc
Q psy9184         410 AVAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVGEK-----ICYYDLSQDEELF  484 (562)
Q Consensus       410 ~yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~~g-----~v~~~l~~~pelF  484 (562)
                      .|||+ .+|+||||+|+||+++.++                    .++|+|||++.......     ......|.+||.+
T Consensus       113 ~~lh~-~~i~H~dl~~~ni~~~~~~--------------------~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~~PE~~  171 (256)
T cd06612         113 EYLHS-NKKIHRDIKAGNILLNEEG--------------------QAKLADFGVSGQLTDTMAKRNTVIGTPFWMAPEVI  171 (256)
T ss_pred             HHHHH-CCcccCCCCcceEEECCCC--------------------cEEEcccccchhcccCccccccccCCccccCHHHH
Confidence            99999 7999999999999999886                    79999999998765422     2345578899987


Q ss_pred             CCC-CCcHHHHHHHhhcccCCCCCCCCCC
Q psy9184         485 EGE-GDYQFDMYRMMRKQCQNNWQNFTPK  512 (562)
Q Consensus       485 ~g~-~~~q~dIy~lm~~~~~~~W~~~~P~  512 (562)
                      .+. .+.+.|||++ |......+.+..|+
T Consensus       172 ~~~~~~~~~Di~s~-G~il~~l~~g~~p~  199 (256)
T cd06612         172 QEIGYNNKADIWSL-GITAIEMAEGKPPY  199 (256)
T ss_pred             hcCCCCchhhHHHH-HHHHHHHHhCCCCC
Confidence            764 4556899875 33332334444444

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a

>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4

Probab=99.88  E-value=6.3e-22  Score=196.94  Aligned_cols=228  Identities=17%  Similarity=0.189  Sum_probs=164.2

Q ss_pred             CCceeeeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCcccccc
Q psy9184         262 ALKNCKKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTELL  335 (562)
Q Consensus       262 ~y~~~~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~l~  335 (562)
                      +|++.+.||+|+||.||+|      ..||+|.++....      .......+.+|+.+++.++|                
T Consensus         1 ~y~~~~~lg~G~~~~v~~~~~~~~~~~~~ik~~~~~~~------~~~~~~~~~~e~~~~~~l~~----------------   58 (264)
T cd06626           1 RWQRGNKIGGGTFGKVYTAVNLDTGELMAVKEIRIQDN------DPKTIKEIADEMKVLELLKH----------------   58 (264)
T ss_pred             CceeeeEeecCCCcEEEEEEECCCCcEEEEEEEECccc------chHHHHHHHHHHHHHHhCCC----------------
Confidence            4788999999999999999      6899999987641      24566788999999999998                


Q ss_pred             cccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc---cCCHHHHHHHHHHHHHHHHHH
Q psy9184         336 KCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK---YRSPNQTYAMILQVVFSLAVA  412 (562)
Q Consensus       336 ~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~---~l~e~~i~~I~~QIl~aL~yL  412 (562)
                                +||+++++.+..             .+.+++|+||+.++++.+.+.   .+++..+..++.|++.||.||
T Consensus        59 ----------~~i~~~~~~~~~-------------~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~i~~~i~~~l~~l  115 (264)
T cd06626          59 ----------PNLVKYYGVEVH-------------REKVYIFMEYCSGGTLEELLEHGRILDEHVIRVYTLQLLEGLAYL  115 (264)
T ss_pred             ----------CChhheeeeEec-------------CCEEEEEEecCCCCcHHHHHhhcCCCChHHHHHHHHHHHHHHHHH
Confidence                      999999987654             558999999999987776653   378999999999999999999


Q ss_pred             HhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecCC---------cEEEeecCCCccc
Q psy9184         413 EVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVGE---------KICYYDLSQDEEL  483 (562)
Q Consensus       413 H~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~~---------g~v~~~l~~~pel  483 (562)
                      |+ .+|+||||+|+||+++.++                    .++|+|||++......         +......|.+||.
T Consensus       116 h~-~~i~H~dl~~~nil~~~~~--------------------~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~PE~  174 (264)
T cd06626         116 HS-HGIVHRDIKPANIFLDHNG--------------------VIKLGDFGCAVKLKNNTTTMGEEVQSLAGTPAYMAPEV  174 (264)
T ss_pred             HH-CCcccCCCCHHHEEECCCC--------------------CEEEcccccccccCCCCCcccccccCCcCCcCccChhh
Confidence            99 7999999999999999876                    7999999999876542         1233557888998


Q ss_pred             cCCC----CCcHHHHHHHhhcccCCCCCCCCCCChh--hhHHHHHHHHhhcccCCCCCCCchhHHHHHHHHHHHhcCCCc
Q psy9184         484 FEGE----GDYQFDMYRMMRKQCQNNWQNFTPKNNV--FWIHYLVDKATCLKKGYQYLRAPRHQAFELLEELGQNALHFD  557 (562)
Q Consensus       484 F~g~----~~~q~dIy~lm~~~~~~~W~~~~P~tn~--~wl~yl~~~Ll~~~~~~~~~~~~~~~~~~~l~~l~~~~l~~~  557 (562)
                      +.+.    .....|+|+.. ......+.+..|+...  .|. ............++..    ......+.+|...+++.+
T Consensus       175 ~~~~~~~~~~~~~Dv~s~G-~il~~l~~g~~pf~~~~~~~~-~~~~~~~~~~~~~~~~----~~~~~~~~~li~~~l~~~  248 (264)
T cd06626         175 ITGGKGKGHGRAADIWSLG-CVVLEMATGKRPWSELDNEFQ-IMFHVGAGHKPPIPDS----LQLSPEGKDFLDRCLESD  248 (264)
T ss_pred             ccCCCCCCCCcccchHHHH-HHHHHHHhCCCCccCCcchHH-HHHHHhcCCCCCCCcc----cccCHHHHHHHHHHccCC
Confidence            8764    34558998753 3333344455555322  111 1111111101111111    111345667788888766


Q ss_pred             CcCC
Q psy9184         558 SCYE  561 (562)
Q Consensus       558 s~~~  561 (562)
                      ...|
T Consensus       249 p~~R  252 (264)
T cd06626         249 PKKR  252 (264)
T ss_pred             cccC
Confidence            5544

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4

>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3

Probab=99.88  E-value=7.7e-22  Score=203.76  Aligned_cols=227  Identities=18%  Similarity=0.205  Sum_probs=162.6

Q ss_pred             CceeeeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCccccccc
Q psy9184         263 LKNCKKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTELLK  336 (562)
Q Consensus       263 y~~~~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~l~~  336 (562)
                      |...++||+|+||.||+|      ..||+|++....     .........+.+|+.+++.++|                 
T Consensus        23 ~~~~~~lg~g~~g~v~~~~~~~~~~~v~ik~~~~~~-----~~~~~~~~~~~~E~~~l~~l~h-----------------   80 (313)
T cd06633          23 FVGLHEIGHGSFGAVYFATNSHTNEVVAVKKMSYSG-----KQTNEKWQDIIKEVKFLQQLKH-----------------   80 (313)
T ss_pred             hhcceeeccCCCeEEEEEEECCCCcEEEEEEEeccc-----cCchHHHHHHHHHHHHHHhCCC-----------------
Confidence            667789999999999999      689999997653     2223445678899999999998                 


Q ss_pred             ccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc----cCCHHHHHHHHHHHHHHHHHH
Q psy9184         337 CSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK----YRSPNQTYAMILQVVFSLAVA  412 (562)
Q Consensus       337 ~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~----~l~e~~i~~I~~QIl~aL~yL  412 (562)
                               ||++++++++.+             ....|+||||+. |++++.+.    .+++.++..++.||+.||.||
T Consensus        81 ---------~~iv~~~~~~~~-------------~~~~~lv~e~~~-~~l~~~l~~~~~~l~~~~~~~~~~qi~~al~~L  137 (313)
T cd06633          81 ---------PNTIEYKGCYLK-------------EHTAWLVMEYCL-GSASDLLEVHKKPLQEVEIAAITHGALQGLAYL  137 (313)
T ss_pred             ---------CCCccEEEEEEe-------------CCEEEEEEecCC-CCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHH
Confidence                     999999988875             458999999996 45555442    378999999999999999999


Q ss_pred             HhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecC-CcEEEeecCCCccccC----CC
Q psy9184         413 EVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVG-EKICYYDLSQDEELFE----GE  487 (562)
Q Consensus       413 H~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~-~g~v~~~l~~~pelF~----g~  487 (562)
                      |+ .||+||||||+||+++.++                    .++|+|||++..... .....+..|++||.+.    +.
T Consensus       138 H~-~gi~H~dl~p~nili~~~~--------------------~~kL~dfg~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~  196 (313)
T cd06633         138 HS-HNMIHRDIKAGNILLTEPG--------------------QVKLADFGSASKSSPANSFVGTPYWMAPEVILAMDEGQ  196 (313)
T ss_pred             HH-CCeecCCCChhhEEECCCC--------------------CEEEeecCCCcccCCCCCccccccccChhhccccCCCC
Confidence            99 7999999999999998876                    699999999876543 2334456789999874    23


Q ss_pred             CCcHHHHHHHhhcccCCCCCCCCCCChhhhHHHHHHHHhhcccCCCCCCCchhHHHHHHHHHHHhcCCCcCcCC
Q psy9184         488 GDYQFDMYRMMRKQCQNNWQNFTPKNNVFWIHYLVDKATCLKKGYQYLRAPRHQAFELLEELGQNALHFDSCYE  561 (562)
Q Consensus       488 ~~~q~dIy~lm~~~~~~~W~~~~P~tn~~wl~yl~~~Ll~~~~~~~~~~~~~~~~~~~l~~l~~~~l~~~s~~~  561 (562)
                      .+...|+|++ |......|.+..|+.+..-...+......   ..+..  ........+..|...+|+++...|
T Consensus       197 ~~~~sDv~sl-Gvil~el~~g~~p~~~~~~~~~~~~~~~~---~~~~~--~~~~~~~~l~~li~~~l~~~P~~R  264 (313)
T cd06633         197 YDGKVDVWSL-GITCIELAERKPPLFNMNAMSALYHIAQN---DSPTL--QSNEWTDSFRGFVDYCLQKIPQER  264 (313)
T ss_pred             CCchhhHHHH-HHHHHHHHhCCCCCCCCChHHHHHHHHhc---CCCCC--CccccCHHHHHHHHHHccCChhhC
Confidence            4556899886 44443456666665432212222111111   11111  111113457788888888877665

Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co

>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=99.88  E-value=4.5e-22  Score=201.53  Aligned_cols=171  Identities=13%  Similarity=0.099  Sum_probs=130.6

Q ss_pred             eeeccCceEEEEE------------------------------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhc
Q psy9184         268 KIGEGVYGEVFKL------------------------------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKET  317 (562)
Q Consensus       268 ~LG~GsfG~Vyka------------------------------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L  317 (562)
                      .||+|+||.||+|                              ..||+|++....        ......+.+|+.+++.+
T Consensus         2 ~lG~G~~~~vy~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~--------~~~~~~~~~~~~~~~~l   73 (274)
T cd05076           2 HLGQGTRTNIYDGRLRVEGGGEPEEDEMEDEDPLVEGNNNGRELRVVLKVLDPSH--------RDIALAFFETASLMSQV   73 (274)
T ss_pred             CcCcccccceecceeEeccCCCCcccccccccccccccCCCeeeeEEEEecChHH--------HHHHHHHHHHHHHHhcC
Confidence            6999999999988                              137888876432        23345678899999999


Q ss_pred             CCccccCCCCCCcccccccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc----cC
Q psy9184         318 SDLQYRTENSTPCFTELLKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK----YR  393 (562)
Q Consensus       318 ~h~~~~~~n~~p~fv~l~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~----~l  393 (562)
                      +|                          |||+++++++..             +...|+||||+++|++...+.    .+
T Consensus        74 ~h--------------------------~niv~~~~~~~~-------------~~~~~lv~ey~~~g~L~~~l~~~~~~~  114 (274)
T cd05076          74 SH--------------------------IHLAFVHGVCVR-------------GSENIMVEEFVEHGPLDVCLRKEKGRV  114 (274)
T ss_pred             CC--------------------------CCeeeEEEEEEe-------------CCceEEEEecCCCCcHHHHHHhcCCCC
Confidence            98                          999999988864             457899999999997655442    37


Q ss_pred             CHHHHHHHHHHHHHHHHHHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecC-CcE
Q psy9184         394 SPNQTYAMILQVVFSLAVAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVG-EKI  472 (562)
Q Consensus       394 ~e~~i~~I~~QIl~aL~yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~-~g~  472 (562)
                      ++..+..++.||+.||+|||+ .+|+||||||+|||++..+...             .....++|+|||++..... ...
T Consensus       115 ~~~~~~~i~~qi~~~l~~lH~-~~iiH~dlkp~Nill~~~~~~~-------------~~~~~~kl~d~g~~~~~~~~~~~  180 (274)
T cd05076         115 PVAWKITVAQQLASALSYLED-KNLVHGNVCAKNILLARLGLAE-------------GTSPFIKLSDPGVSFTALSREER  180 (274)
T ss_pred             CHHHHHHHHHHHHHHHHHHHc-CCccCCCCCcccEEEeccCccc-------------CccceeeecCCcccccccccccc
Confidence            899999999999999999999 6999999999999998754210             0011589999999865433 223


Q ss_pred             EEeecCCCccccCCC--CCcHHHHHHHhh
Q psy9184         473 CYYDLSQDEELFEGE--GDYQFDMYRMMR  499 (562)
Q Consensus       473 v~~~l~~~pelF~g~--~~~q~dIy~lm~  499 (562)
                      ..+..|++||.+.+.  .+...|||++.-
T Consensus       181 ~~~~~~~aPe~~~~~~~~~~~~Dv~slG~  209 (274)
T cd05076         181 VERIPWIAPECVPGGNSLSTAADKWSFGT  209 (274)
T ss_pred             ccCCcccCchhhcCCCCCCcHHHHHHHHH
Confidence            345568899988653  456689988643

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt

>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase

Probab=99.88  E-value=5.4e-22  Score=208.34  Aligned_cols=177  Identities=20%  Similarity=0.278  Sum_probs=139.6

Q ss_pred             CCCceeeeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCccccc
Q psy9184         261 SALKNCKKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTEL  334 (562)
Q Consensus       261 ~~y~~~~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~l  334 (562)
                      .+|+..+.||+|+||.||+|      +.||+|++....      ........+.+|+.+++.++|               
T Consensus        16 ~~y~~~~~lg~g~~g~V~~~~~~~~~~~vaiK~~~~~~------~~~~~~~~~~~E~~~l~~l~h---------------   74 (353)
T cd07850          16 KRYQNLKPIGSGAQGIVCAAYDTVTGQNVAIKKLSRPF------QNVTHAKRAYRELVLMKLVNH---------------   74 (353)
T ss_pred             cceEEEEEeccCCCEEEEEEEECCCCCEEEEEecCccc------cChhHHHHHHHHHHHHHhcCC---------------
Confidence            67999999999999999999      789999987532      122334567789999999998               


Q ss_pred             ccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc-cCCHHHHHHHHHHHHHHHHHHH
Q psy9184         335 LKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK-YRSPNQTYAMILQVVFSLAVAE  413 (562)
Q Consensus       335 ~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~-~l~e~~i~~I~~QIl~aL~yLH  413 (562)
                                 |||++++++|.....       .......|+||||+.+ ++.+.+. .+++.++..++.||+.||+|||
T Consensus        75 -----------~~iv~~~~~~~~~~~-------~~~~~~~~lv~e~~~~-~l~~~~~~~l~~~~~~~~~~ql~~aL~~LH  135 (353)
T cd07850          75 -----------KNIIGLLNVFTPQKS-------LEEFQDVYLVMELMDA-NLCQVIQMDLDHERMSYLLYQMLCGIKHLH  135 (353)
T ss_pred             -----------CCCcceeeeeccCCC-------ccccCcEEEEEeccCC-CHHHHHhhcCCHHHHHHHHHHHHHHHHHHH
Confidence                       899998888764210       1123468999999974 5655543 3899999999999999999999


Q ss_pred             hhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecCC----cEEEeecCCCccccCCC-C
Q psy9184         414 VELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVGE----KICYYDLSQDEELFEGE-G  488 (562)
Q Consensus       414 ~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~~----g~v~~~l~~~pelF~g~-~  488 (562)
                      + .||+||||||+|||++.++                    .++|+|||+++.....    ....+..|++||.+.+. .
T Consensus       136 ~-~gi~H~dlkp~Nil~~~~~--------------------~~kL~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~  194 (353)
T cd07850         136 S-AGIIHRDLKPSNIVVKSDC--------------------TLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGY  194 (353)
T ss_pred             h-CCeeeCCCCHHHEEECCCC--------------------CEEEccCccceeCCCCCCCCCCcccccccCHHHHhCCCC
Confidence            9 7999999999999999886                    7999999999876542    22345678899987763 4


Q ss_pred             CcHHHHHHHh
Q psy9184         489 DYQFDMYRMM  498 (562)
Q Consensus       489 ~~q~dIy~lm  498 (562)
                      +.+.|||++.
T Consensus       195 ~~~~DvwslG  204 (353)
T cd07850         195 KENVDIWSVG  204 (353)
T ss_pred             CCchhhHhHH
Confidence            5568998864

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK

>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=99.88  E-value=6.5e-22  Score=198.84  Aligned_cols=225  Identities=12%  Similarity=0.125  Sum_probs=153.6

Q ss_pred             eeeeccCceEEEEEe------------------eEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCC
Q psy9184         267 KKIGEGVYGEVFKLN------------------NSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENST  328 (562)
Q Consensus       267 ~~LG~GsfG~Vyka~------------------~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~  328 (562)
                      +.||+|+||.||+|.                  .+|+|.+....        ......+..|+.+++.++|         
T Consensus         1 ~~lg~G~~~~vy~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~--------~~~~~~~~~~~~~l~~l~h---------   63 (262)
T cd05077           1 EHLGRGTRTQIYAGILNYKDDDEDDGYSYEKEIKVILKVLDPSH--------RDISLAFFETASMMRQVSH---------   63 (262)
T ss_pred             CccccCCcceEeeeecccCCCccccccchhhceeEEEeecChhh--------hhHHHHHHHHHHHHHhCCC---------
Confidence            368999999999991                  48888876432        2334567889999999998         


Q ss_pred             CcccccccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc----cCCHHHHHHHHHH
Q psy9184         329 PCFTELLKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK----YRSPNQTYAMILQ  404 (562)
Q Consensus       329 p~fv~l~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~----~l~e~~i~~I~~Q  404 (562)
                                       |||+++++++..             +...+++|||+++|.+...+.    .+++..+..++.|
T Consensus        64 -----------------p~iv~~~~~~~~-------------~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~q  113 (262)
T cd05077          64 -----------------KHIVLLYGVCVR-------------DVENIMVEEFVEFGPLDLFMHRKSDVLTTPWKFKVAKQ  113 (262)
T ss_pred             -----------------CCEeeEEEEEec-------------CCCCEEEEecccCCCHHHHHHhcCCCCCHHHHHHHHHH
Confidence                             999999988764             457899999999886543332    3789999999999


Q ss_pred             HHHHHHHHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecC-CcEEEeecCCCccc
Q psy9184         405 VVFSLAVAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVG-EKICYYDLSQDEEL  483 (562)
Q Consensus       405 Il~aL~yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~-~g~v~~~l~~~pel  483 (562)
                      |+.||+|||+ .+|+||||||+|||++.++..             ...+..++++|||++..... ..+..+..|++||.
T Consensus       114 i~~~l~~lH~-~~ivH~dlkp~Nill~~~~~~-------------~~~~~~~~l~d~g~~~~~~~~~~~~~~~~y~aPE~  179 (262)
T cd05077         114 LASALSYLED-KDLVHGNVCTKNILLAREGID-------------GECGPFIKLSDPGIPITVLSRQECVERIPWIAPEC  179 (262)
T ss_pred             HHHHHHHhhh-CCeECCCCCcccEEEecCCcc-------------CCCCceeEeCCCCCCccccCcccccccccccChhh
Confidence            9999999999 799999999999999876421             01122589999999976543 34455667899998


Q ss_pred             cCC--CCCcHHHHHHHhhcccCCCC-CCCCCCChhhhHHHHHHHHhhcccCCCCCCCchhHHHHHHHHHHHhcCCCcCcC
Q psy9184         484 FEG--EGDYQFDMYRMMRKQCQNNW-QNFTPKNNVFWIHYLVDKATCLKKGYQYLRAPRHQAFELLEELGQNALHFDSCY  560 (562)
Q Consensus       484 F~g--~~~~q~dIy~lm~~~~~~~W-~~~~P~tn~~wl~yl~~~Ll~~~~~~~~~~~~~~~~~~~l~~l~~~~l~~~s~~  560 (562)
                      +.+  ......|||++.-.. ...+ .+..|+.... +... ..+..  ..+....    .....+..|..++++++...
T Consensus       180 ~~~~~~~~~~~DiwslG~~l-~el~~~~~~p~~~~~-~~~~-~~~~~--~~~~~~~----~~~~~~~~li~~cl~~dp~~  250 (262)
T cd05077         180 VEDSKNLSIAADKWSFGTTL-WEICYNGEIPLKDKT-LAEK-ERFYE--GQCMLVT----PSCKELADLMTHCMNYDPNQ  250 (262)
T ss_pred             hcCCCCCCchhHHHHHHHHH-HHHHhCCCCCCCCcc-hhHH-HHHHh--cCccCCC----CChHHHHHHHHHHcCCChhh
Confidence            863  345568998753332 2222 2444443321 1111 11111  1111111    11346777888888877665


Q ss_pred             C
Q psy9184         561 E  561 (562)
Q Consensus       561 ~  561 (562)
                      |
T Consensus       251 R  251 (262)
T cd05077         251 R  251 (262)
T ss_pred             C
Confidence            4

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom

>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase

Probab=99.88  E-value=1.1e-21  Score=194.99  Aligned_cols=225  Identities=21%  Similarity=0.195  Sum_probs=159.6

Q ss_pred             CCCceeeeeeccCceEEEEE-----eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCcccccc
Q psy9184         261 SALKNCKKIGEGVYGEVFKL-----NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTELL  335 (562)
Q Consensus       261 ~~y~~~~~LG~GsfG~Vyka-----~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~l~  335 (562)
                      .+|++.+.||+|+||.||+|     ..+|+|++.....         ....+.+|+.+++.++|                
T Consensus         4 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~k~~~~~~~---------~~~~~~~e~~~l~~l~~----------------   58 (256)
T cd05112           4 SELTLVQEIGSGQFGLVWLGYWLEKRKVAIKTIREGAM---------SEEDFIEEAQVMMKLSH----------------   58 (256)
T ss_pred             hHeEEEeeecCcccceEEEEEEeCCCeEEEEECCCCCC---------CHHHHHHHHHHHHhCCC----------------
Confidence            56889999999999999998     6899998875421         12357789999999998                


Q ss_pred             cccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc----cCCHHHHHHHHHHHHHHHHH
Q psy9184         336 KCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK----YRSPNQTYAMILQVVFSLAV  411 (562)
Q Consensus       336 ~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~----~l~e~~i~~I~~QIl~aL~y  411 (562)
                                |+++++++.+..             ....|+||||+.+|++.+.+.    .+++..++.++.|++.||+|
T Consensus        59 ----------~~i~~~~~~~~~-------------~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~  115 (256)
T cd05112          59 ----------PKLVQLYGVCTE-------------RSPICLVFEFMEHGCLSDYLRAQRGKFSQETLLGMCLDVCEGMAY  115 (256)
T ss_pred             ----------CCeeeEEEEEcc-------------CCceEEEEEcCCCCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHH
Confidence                      999999988765             457899999999998766553    37889999999999999999


Q ss_pred             HHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecCC------cEEEeecCCCccccC
Q psy9184         412 AEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVGE------KICYYDLSQDEELFE  485 (562)
Q Consensus       412 LH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~~------g~v~~~l~~~pelF~  485 (562)
                      ||+ .+++||||||+||+++.++                    .++|+|||+++.....      +..+...|++||.+.
T Consensus       116 lH~-~~i~h~dl~p~ni~i~~~~--------------------~~~l~d~g~~~~~~~~~~~~~~~~~~~~~~~aPe~~~  174 (256)
T cd05112         116 LES-SNVIHRDLAARNCLVGENQ--------------------VVKVSDFGMTRFVLDDQYTSSTGTKFPVKWSSPEVFS  174 (256)
T ss_pred             HHH-CCccccccccceEEEcCCC--------------------eEEECCCcceeecccCcccccCCCccchhhcCHhHhc
Confidence            999 7999999999999998775                    7999999999865431      222334578899877


Q ss_pred             C-CCCcHHHHHHHhhcccCCCCC-CCCCCChhhhHHHHHHHHhhcccCCCCCCCchhHHHHHHHHHHHhcCCCcCcCC
Q psy9184         486 G-EGDYQFDMYRMMRKQCQNNWQ-NFTPKNNVFWIHYLVDKATCLKKGYQYLRAPRHQAFELLEELGQNALHFDSCYE  561 (562)
Q Consensus       486 g-~~~~q~dIy~lm~~~~~~~W~-~~~P~tn~~wl~yl~~~Ll~~~~~~~~~~~~~~~~~~~l~~l~~~~l~~~s~~~  561 (562)
                      + ....+.|+|++.-... ..+. +..|+.+.. ...+.+.+.. +..+..+..    ..+.+..|...+|..+...|
T Consensus       175 ~~~~~~~~Dv~slG~~l~-el~~~g~~p~~~~~-~~~~~~~~~~-~~~~~~~~~----~~~~~~~l~~~~l~~~p~~R  245 (256)
T cd05112         175 FSKYSSKSDVWSFGVLMW-EVFSEGKTPYENRS-NSEVVETINA-GFRLYKPRL----ASQSVYELMQHCWKERPEDR  245 (256)
T ss_pred             cCCcChHHHHHHHHHHHH-HHHcCCCCCCCcCC-HHHHHHHHhC-CCCCCCCCC----CCHHHHHHHHHHcccChhhC
Confidence            5 4455689988643332 2232 444543221 2223333332 111111111    12456666777777665544

Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ

>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1

Probab=99.88  E-value=6.3e-22  Score=198.34  Aligned_cols=187  Identities=20%  Similarity=0.228  Sum_probs=147.2

Q ss_pred             CCceeeeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcC-CccccCCCCCCccccc
Q psy9184         262 ALKNCKKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETS-DLQYRTENSTPCFTEL  334 (562)
Q Consensus       262 ~y~~~~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~-h~~~~~~n~~p~fv~l  334 (562)
                      +|.+.+.||.|+||.||+|      +.||+|++....     .........+.+|+.+++.+. |               
T Consensus         2 ~y~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~-----~~~~~~~~~~~~e~~~~~~l~~~---------------   61 (280)
T cd05581           2 DFKFGKIIGEGSFSTVVLAKEKETNKEYAIKILDKRQ-----LIKEKKVKYVKIEKEVLTRLNGH---------------   61 (280)
T ss_pred             CceEeeeecCCCceEEEEEEEcCCCCEEEEEEechHh-----ccchHHHHHHHHHHHHHHhcccC---------------
Confidence            6889999999999999999      789999987642     112333467889999999998 6               


Q ss_pred             ccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc---cCCHHHHHHHHHHHHHHHHH
Q psy9184         335 LKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK---YRSPNQTYAMILQVVFSLAV  411 (562)
Q Consensus       335 ~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~---~l~e~~i~~I~~QIl~aL~y  411 (562)
                                 |||+++++.+..             ++..|+|||++.+|++.+.+.   .+++..++.++.|++.||.|
T Consensus        62 -----------~~i~~~~~~~~~-------------~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~i~~ql~~~l~~  117 (280)
T cd05581          62 -----------PGIIKLYYTFQD-------------EENLYFVLEYAPNGELLQYIRKYGSLDEKCTRFYAAEILLALEY  117 (280)
T ss_pred             -----------CCchhHHHHhcC-------------CceEEEEEcCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHH
Confidence                       999999999875             558999999999998766653   48999999999999999999


Q ss_pred             HHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecCCc--------------------
Q psy9184         412 AEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVGEK--------------------  471 (562)
Q Consensus       412 LH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~~g--------------------  471 (562)
                      ||+ .|++|+||+|+||+++.++                    .++|+|||++.......                    
T Consensus       118 Lh~-~~~~H~dl~~~ni~i~~~~--------------------~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  176 (280)
T cd05581         118 LHS-KGIIHRDLKPENILLDKDM--------------------HIKITDFGTAKVLDPNSSPESNKGDATNIDSQIEKNR  176 (280)
T ss_pred             HHH-CCeeecCCCHHHeEECCCC--------------------CEEecCCccccccCCccccccCCCCCccccccccccc
Confidence            999 7999999999999998876                    79999999998765422                    


Q ss_pred             -----EEEeecCCCccccCCC-CCcHHHHHHHhhcccCCCCCCCCCCCh
Q psy9184         472 -----ICYYDLSQDEELFEGE-GDYQFDMYRMMRKQCQNNWQNFTPKNN  514 (562)
Q Consensus       472 -----~v~~~l~~~pelF~g~-~~~q~dIy~lm~~~~~~~W~~~~P~tn  514 (562)
                           ...+..|.+||.+.+. ...+.|+|++. ......|.+..|+..
T Consensus       177 ~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG-~~l~~l~~g~~p~~~  224 (280)
T cd05581         177 RRFASFVGTAEYVSPELLNEKPAGKSSDLWALG-CIIYQMLTGKPPFRG  224 (280)
T ss_pred             cccccccCCccccCHHHhCCCCCChhhhHHHHH-HHHHHHHhCCCCCCC
Confidence                 1234556788876653 45568998753 333345556666543

Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto

>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase

Probab=99.88  E-value=4.6e-22  Score=197.84  Aligned_cols=167  Identities=22%  Similarity=0.242  Sum_probs=135.4

Q ss_pred             CCCceeeeeeccCceEEEEE----eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCccccccc
Q psy9184         261 SALKNCKKIGEGVYGEVFKL----NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTELLK  336 (562)
Q Consensus       261 ~~y~~~~~LG~GsfG~Vyka----~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~l~~  336 (562)
                      .+|++.+.||+|+||.||++    +.+|+|.+....          ....+.+|+.+++.++|                 
T Consensus         6 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~iK~~~~~~----------~~~~~~~e~~~l~~~~~-----------------   58 (254)
T cd05083           6 QKLTLGEIIGEGEFGAVLQGEYTGQKVAVKNIKCDV----------TAQAFLEETAVMTKLHH-----------------   58 (254)
T ss_pred             HHceeeeeeccCCCCceEecccCCCceEEEeecCcc----------hHHHHHHHHHHHHhCCC-----------------
Confidence            56889999999999999999    889999987532          12467899999999998                 


Q ss_pred             ccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc-----cCCHHHHHHHHHHHHHHHHH
Q psy9184         337 CSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK-----YRSPNQTYAMILQVVFSLAV  411 (562)
Q Consensus       337 ~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~-----~l~e~~i~~I~~QIl~aL~y  411 (562)
                               ||++++++.+..              +..|++|||+.+|++.+.+.     .+++..+..++.|++.||.|
T Consensus        59 ---------~~i~~~~~~~~~--------------~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~al~~  115 (254)
T cd05083          59 ---------KNLVRLLGVILH--------------NGLYIVMELMSKGNLVNFLRTRGRALVSVIQLLQFSLDVAEGMEY  115 (254)
T ss_pred             ---------CCcCeEEEEEcC--------------CCcEEEEECCCCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHH
Confidence                     999999887753              34799999999998876653     27888999999999999999


Q ss_pred             HHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecC--CcEEEeecCCCccccCC-CC
Q psy9184         412 AEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVG--EKICYYDLSQDEELFEG-EG  488 (562)
Q Consensus       412 LH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~--~g~v~~~l~~~pelF~g-~~  488 (562)
                      ||+ .|++||||||+|||++.++                    .++|+|||+++....  .+......|.+||.+.+ ..
T Consensus       116 lH~-~~~~H~dl~p~nili~~~~--------------------~~kl~Dfg~~~~~~~~~~~~~~~~~y~~pe~~~~~~~  174 (254)
T cd05083         116 LES-KKLVHRDLAARNILVSEDG--------------------VAKVSDFGLARVGSMGVDNSKLPVKWTAPEALKHKKF  174 (254)
T ss_pred             HHh-CCeeccccCcceEEEcCCC--------------------cEEECCCccceeccccCCCCCCCceecCHHHhccCCc
Confidence            999 7999999999999998876                    699999999986543  12222345788887765 44


Q ss_pred             CcHHHHHHHh
Q psy9184         489 DYQFDMYRMM  498 (562)
Q Consensus       489 ~~q~dIy~lm  498 (562)
                      ....|+|++.
T Consensus       175 ~~~~Dv~slG  184 (254)
T cd05083         175 SSKSDVWSYG  184 (254)
T ss_pred             CchhhHHHHH
Confidence            5568888854

Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki

>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase

Probab=99.88  E-value=6.1e-22  Score=200.89  Aligned_cols=174  Identities=23%  Similarity=0.327  Sum_probs=138.7

Q ss_pred             CCceeeeeeccCceEEEEE---------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCccc
Q psy9184         262 ALKNCKKIGEGVYGEVFKL---------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFT  332 (562)
Q Consensus       262 ~y~~~~~LG~GsfG~Vyka---------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv  332 (562)
                      +|++.+.||+|+||.||++         ..||+|+++....    .........+.+|+.+++.+.+             
T Consensus         1 ~~~~~~~ig~G~~~~vy~~~~~~~~~~~~~~avk~~~~~~~----~~~~~~~~~~~~E~~~l~~~~~-------------   63 (288)
T cd05583           1 NFELLRVLGTGAYGKVFLVRKVGGHDAGKLYAMKVLKKATI----VQKAKTAEHTRTERQVLEAVRR-------------   63 (288)
T ss_pred             CceEEEEeccCCCceEEEEEEeccccCCcEEEEEEEehHHH----HhhhhHHHHHHHHHHHHHhccC-------------
Confidence            3788899999999999987         5699999875421    1123344567899999999975             


Q ss_pred             ccccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc---cCCHHHHHHHHHHHHHHH
Q psy9184         333 ELLKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK---YRSPNQTYAMILQVVFSL  409 (562)
Q Consensus       333 ~l~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~---~l~e~~i~~I~~QIl~aL  409 (562)
                                  ||+|+.+++.+..             +..+|+||||+.+|++...+.   .+++..+..++.|++.||
T Consensus        64 ------------~~~i~~~~~~~~~-------------~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~ql~~~l  118 (288)
T cd05583          64 ------------CPFLVTLHYAFQT-------------DTKLHLILDYVNGGELFTHLYQREHFTESEVRVYIAEIVLAL  118 (288)
T ss_pred             ------------Ccchhhhheeeec-------------CCEEEEEEecCCCCcHHHHHhhcCCcCHHHHHHHHHHHHHHH
Confidence                        5999999988865             558999999999998876653   378999999999999999


Q ss_pred             HHHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecCC------cEEEeecCCCccc
Q psy9184         410 AVAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVGE------KICYYDLSQDEEL  483 (562)
Q Consensus       410 ~yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~~------g~v~~~l~~~pel  483 (562)
                      .|||+ .+++||||||.||+++.++                    .++|+|||+++.....      .......|++||.
T Consensus       119 ~~lH~-~~~~H~dl~p~nil~~~~~--------------------~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~  177 (288)
T cd05583         119 DHLHQ-LGIIYRDIKLENILLDSEG--------------------HVVLTDFGLSKEFLAEEEERAYSFCGTIEYMAPEV  177 (288)
T ss_pred             HHHHH-CCeeccCCCHHHeEECCCC--------------------CEEEEECccccccccccccccccccCCccccCHHH
Confidence            99999 7999999999999998876                    6999999998865431      1223556788998


Q ss_pred             cCCC---CCcHHHHHHHh
Q psy9184         484 FEGE---GDYQFDMYRMM  498 (562)
Q Consensus       484 F~g~---~~~q~dIy~lm  498 (562)
                      +.+.   .+...|+|++.
T Consensus       178 ~~~~~~~~~~~~Dv~slG  195 (288)
T cd05583         178 IRGGSGGHDKAVDWWSLG  195 (288)
T ss_pred             hcCCCCCCcchhhhHHHH
Confidence            7663   35568888754

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines

>KOG1152|consensus

Probab=99.88  E-value=7.7e-23  Score=218.41  Aligned_cols=194  Identities=20%  Similarity=0.198  Sum_probs=152.5

Q ss_pred             CCCceeeeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCccccc
Q psy9184         261 SALKNCKKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTEL  334 (562)
Q Consensus       261 ~~y~~~~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~l  334 (562)
                      .+|..++.+|+|+||.|++|      ..|+||.|.++..........+.+..+-.||.||..|+..              
T Consensus       561 s~yttlq~lG~GAyGkV~lai~K~n~~eVViK~I~KeRIL~DtWvrDrkLGtVp~EIqIla~l~~~--------------  626 (772)
T KOG1152|consen  561 SDYTTLQPLGEGAYGKVNLAIHKENNYEVVIKMIFKERILVDTWVRDRKLGTVPSEIQILATLNKH--------------  626 (772)
T ss_pred             ccceeeeeccccccceEEEeeecccceEEEeeehhhhhhhhhhhhcccccCccchhHHHHHHhhhc--------------
Confidence            46899999999999999999      7999999998765444444455566778899999999841              


Q ss_pred             ccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCc-cccc---cCCHHHHHHHHHHHHHHHH
Q psy9184         335 LKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDS-GDIK---YRSPNQTYAMILQVVFSLA  410 (562)
Q Consensus       335 ~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll-~~l~---~l~e~~i~~I~~QIl~aL~  410 (562)
                               .|+||++++++|++             ++..||+||--.-|-+| +.+.   .++|.++..||+||+.|++
T Consensus       627 ---------sH~NIlKlLdfFEd-------------dd~yyl~te~hg~gIDLFd~IE~kp~m~E~eAk~IFkQV~agi~  684 (772)
T KOG1152|consen  627 ---------SHENILKLLDFFED-------------DDYYYLETEVHGEGIDLFDFIEFKPRMDEPEAKLIFKQVVAGIK  684 (772)
T ss_pred             ---------Cccchhhhhheeec-------------CCeeEEEecCCCCCcchhhhhhccCccchHHHHHHHHHHHhccc
Confidence                     14999999999997             67899999977545333 3332   3889999999999999999


Q ss_pred             HHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecC---CcEEEeecCCCccccCCC
Q psy9184         411 VAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVG---EKICYYDLSQDEELFEGE  487 (562)
Q Consensus       411 yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~---~g~v~~~l~~~pelF~g~  487 (562)
                      +||+ +||||||||-+|++++.+|                    -+||+|||.|.....   ..-+++.-|.+||++.|.
T Consensus       685 hlh~-~~ivhrdikdenvivd~~g--------------------~~klidfgsaa~~ksgpfd~f~gtv~~aapevl~g~  743 (772)
T KOG1152|consen  685 HLHD-QGIVHRDIKDENVIVDSNG--------------------FVKLIDFGSAAYTKSGPFDVFVGTVDYAAPEVLGGE  743 (772)
T ss_pred             cccc-cCceecccccccEEEecCC--------------------eEEEeeccchhhhcCCCcceeeeeccccchhhhCCC
Confidence            9999 8999999999999999998                    699999999987664   345678889999999995


Q ss_pred             CC-cH-HHHHHHhhcccCCCCCCCCCC
Q psy9184         488 GD-YQ-FDMYRMMRKQCQNNWQNFTPK  512 (562)
Q Consensus       488 ~~-~q-~dIy~lm~~~~~~~W~~~~P~  512 (562)
                      .. -+ .|||. +|..++..--+-.|+
T Consensus       744 ~y~gk~qdiwa-lgillytivykenpy  769 (772)
T KOG1152|consen  744 KYLGKPQDIWA-LGILLYTIVYKENPY  769 (772)
T ss_pred             ccCCCcchhhh-hhheeeEEEeccCCC
Confidence            22 11 58865 455553333333444

>KOG0671|consensus

Probab=99.87  E-value=4.5e-22  Score=204.63  Aligned_cols=250  Identities=20%  Similarity=0.239  Sum_probs=169.8

Q ss_pred             CCCCceeeeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCcccc
Q psy9184         260 SSALKNCKKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTE  333 (562)
Q Consensus       260 ~~~y~~~~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~  333 (562)
                      ..+|.+...+|+|+||.|..|      ..||||+++.-         .+..+..+-|+.+|++|.+--.   +       
T Consensus        88 ~~Ry~i~~~lGeGtFGkV~ec~D~~~~~~vAlKIik~V---------~kYreAa~iEi~vLqki~~~DP---~-------  148 (415)
T KOG0671|consen   88 TNRYEIVDLLGEGTFGKVVECWDRETKEHVALKIIKNV---------DKYREAALIEIEVLQKINESDP---N-------  148 (415)
T ss_pred             ccceehhhhhcCCcccceEEEeecCCCceehHHHHHHH---------HHHhhHHHHHHHHHHHHHhcCC---C-------
Confidence            478999999999999999999      79999999842         4566788899999999976110   1       


Q ss_pred             cccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc-----cCCHHHHHHHHHHHHHH
Q psy9184         334 LLKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK-----YRSPNQTYAMILQVVFS  408 (562)
Q Consensus       334 l~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~-----~l~e~~i~~I~~QIl~a  408 (562)
                              |  ---++.+.++|+-             .++.|||+|.+. .+.++.+.     .++...++.+.+||+.+
T Consensus       149 --------g--~~rcv~m~~wFdy-------------rghiCivfellG-~S~~dFlk~N~y~~fpi~~ir~m~~QL~~s  204 (415)
T KOG0671|consen  149 --------G--KFRCVQMRDWFDY-------------RGHICIVFELLG-LSTFDFLKENNYIPFPIDHIRHMGYQLLES  204 (415)
T ss_pred             --------C--ceEEEeeehhhhc-------------cCceEEEEeccC-hhHHHHhccCCccccchHHHHHHHHHHHHH
Confidence                    0  0246677788875             558999999992 25566554     38999999999999999


Q ss_pred             HHHHHhhCCeEeccCCCCCEEEccCCCCCcccccCCc--ccccccCCceEEEEeccceeeecC-----------------
Q psy9184         409 LAVAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDT--HYAMKTAGVQVTIIDFTISRCFVG-----------------  469 (562)
Q Consensus       409 L~yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~--~~~~~~~g~~vKL~DFGLSr~~~~-----------------  469 (562)
                      ++|||+ ++++|-||||||||+....-...  .....  ..........|+|+|||.|+....                 
T Consensus       205 v~fLh~-~kl~HTDLKPENILfvss~~~~~--~~~k~~~~~~r~~ks~~I~vIDFGsAtf~~e~hs~iVsTRHYRAPEVi  281 (415)
T KOG0671|consen  205 VAFLHD-LKLTHTDLKPENILFVSSEYFKT--YNPKKKVCFIRPLKSTAIKVIDFGSATFDHEHHSTIVSTRHYRAPEVI  281 (415)
T ss_pred             HHHHHh-cceeecCCChheEEEeccceEEE--eccCCccceeccCCCcceEEEecCCcceeccCcceeeeccccCCchhe
Confidence            999999 89999999999999987752111  11111  112334456899999999987654                 


Q ss_pred             -------------CcEEEeecCCCccccCCCCCcH--HHHHHHhhccc----------------CCCCCCCCCCChhhhH
Q psy9184         470 -------------EKICYYDLSQDEELFEGEGDYQ--FDMYRMMRKQC----------------QNNWQNFTPKNNVFWI  518 (562)
Q Consensus       470 -------------~g~v~~~l~~~pelF~g~~~~q--~dIy~lm~~~~----------------~~~W~~~~P~tn~~wl  518 (562)
                                   .||+..++|+|..+|++..+..  +-+-+.+|.+.                .-+|......-.   +
T Consensus       282 LgLGwS~pCDvWSiGCIL~ElytG~~LFqtHen~EHLaMMerIlGp~P~~mi~r~~~~Kyf~~~rldw~e~~~~~~---~  358 (415)
T KOG0671|consen  282 LGLGWSQPCDVWSIGCILVELYTGETLFQTHENLEHLAMMERILGPIPSRMIKKTRKEKYFRRGRLDWPEVSSKGK---S  358 (415)
T ss_pred             eccCcCCccCceeeeeEEEEeeccceecccCCcHHHHHHHHHhhCCCcHHHhhhhhhHhhhhcccccCcccccccc---c
Confidence                         5888888888888888865322  22222333222                123443333221   2


Q ss_pred             HHHHHHHhhcccCCCCCCCchhHHHHHHHHHHHhcCCCcCcCCC
Q psy9184         519 HYLVDKATCLKKGYQYLRAPRHQAFELLEELGQNALHFDSCYEM  562 (562)
Q Consensus       519 ~yl~~~Ll~~~~~~~~~~~~~~~~~~~l~~l~~~~l~~~s~~~~  562 (562)
                      .|+.+    .++++..-.......-..|-+|.++||-|+.+.|+
T Consensus       359 k~v~~----~ckpl~~~~~~~d~e~~~LfDLl~~mL~fDP~~Ri  398 (415)
T KOG0671|consen  359 KYVFE----PCKPLKKYMLQDDLEHVQLFDLLRRMLEFDPARRI  398 (415)
T ss_pred             hhhhc----CCccHHHHhccCcHHHhHHHHHHHHHHccCccccc
Confidence            22222    12222222222222345677899999999999875

>KOG4645|consensus

Probab=99.87  E-value=2.5e-23  Score=238.11  Aligned_cols=184  Identities=18%  Similarity=0.227  Sum_probs=153.2

Q ss_pred             CCceeeeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCcccccc
Q psy9184         262 ALKNCKKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTELL  335 (562)
Q Consensus       262 ~y~~~~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~l~  335 (562)
                      +++....||.|.||.||.|      +..|+|.+.....      ..+.+..+.+|..++..|+|                
T Consensus      1236 rWqrg~~Ig~G~fG~VYtavN~~tGellAvKEI~iq~~------~~k~~~~i~eEm~vlE~lnH---------------- 1293 (1509)
T KOG4645|consen 1236 RWQRGNFIGGGTFGKVYTAVNLDTGELLAVKEIKIQDS------DHKTFKLIAEEMKVLEGLNH---------------- 1293 (1509)
T ss_pred             eeccccccCCcceeeeEEeecCCccchhhhhhhhcCcc------ccccCcchHHHHHHHHhccC----------------
Confidence            5677889999999999999      8999999998752      26777889999999999999                


Q ss_pred             cccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCcccccc---CCHHHHHHHHHHHHHHHHHH
Q psy9184         336 KCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIKY---RSPNQTYAMILQVVFSLAVA  412 (562)
Q Consensus       336 ~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~~---l~e~~i~~I~~QIl~aL~yL  412 (562)
                                ||+|++|++-.+             .+.++|.||||.||++.+.+..   .++.....+..|++.||+||
T Consensus      1294 ----------pNlV~YyGVEvH-------------Rekv~IFMEyC~~GsLa~ll~~gri~dE~vt~vyt~qll~gla~L 1350 (1509)
T KOG4645|consen 1294 ----------PNLVRYYGVEVH-------------REKVYIFMEYCEGGSLASLLEHGRIEDEMVTRVYTKQLLEGLAYL 1350 (1509)
T ss_pred             ----------ccccccCceeec-------------HHHHHHHHHHhccCcHHHHHHhcchhhhhHHHHHHHHHHHHHHHH
Confidence                      888888877665             3478999999999988776653   67778888999999999999


Q ss_pred             HhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecC---------CcEEEeecCCCccc
Q psy9184         413 EVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVG---------EKICYYDLSQDEEL  483 (562)
Q Consensus       413 H~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~---------~g~v~~~l~~~pel  483 (562)
                      |+ +|||||||||+||+++..|                    .+|++|||.|+.+..         .+.++|++|||||+
T Consensus      1351 H~-~gIVHRDIK~aNI~Ld~~g--------------------~iK~~DFGsa~ki~~~~~~~~~el~~~~GT~~YMAPEv 1409 (1509)
T KOG4645|consen 1351 HE-HGIVHRDIKPANILLDFNG--------------------LIKYGDFGSAVKIKNNAQTMPGELQSMMGTPMYMAPEV 1409 (1509)
T ss_pred             Hh-cCceecCCCccceeeecCC--------------------cEEeecccceeEecCchhcCCHHHHhhcCCchhcCchh
Confidence            99 8999999999999999998                    799999999998765         35678999999999


Q ss_pred             cCCCC---Cc-HHHHHHHhhcccCCCCCCCCCC
Q psy9184         484 FEGEG---DY-QFDMYRMMRKQCQNNWQNFTPK  512 (562)
Q Consensus       484 F~g~~---~~-q~dIy~lm~~~~~~~W~~~~P~  512 (562)
                      |.|+.   .- ..|||++.-..+ ++-.+..|+
T Consensus      1410 it~t~~kG~~~A~DiWslGCVVl-EM~tGkrPW 1441 (1509)
T KOG4645|consen 1410 ITGTKGKGHGGAADIWSLGCVVL-EMATGKRPW 1441 (1509)
T ss_pred             hcccccCCCCcchhhhcccceEE-EeecCCCch
Confidence            99853   22 289988765555 344444444

>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3

Probab=99.87  E-value=1e-21  Score=199.39  Aligned_cols=182  Identities=19%  Similarity=0.170  Sum_probs=132.9

Q ss_pred             eeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCcccccccccccC
Q psy9184         268 KIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTELLKCSCVR  341 (562)
Q Consensus       268 ~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~l~~~~iv~  341 (562)
                      .||+|+||.||++      +.+|+|.+......     .........+|..+++.+.+..                    
T Consensus         1 ~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~--------------------   55 (279)
T cd05633           1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIK-----MKQGETLALNERIMLSLVSTGD--------------------   55 (279)
T ss_pred             CcccCCCeEEEEEEECCCCcEEEEEEEEccccc-----cchHHHHHHHHHHHHHHHhhCC--------------------
Confidence            4899999999998      78999999765311     1111123345555554443210                    


Q ss_pred             CCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc---cCCHHHHHHHHHHHHHHHHHHHhhCCe
Q psy9184         342 GRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK---YRSPNQTYAMILQVVFSLAVAEVELEF  418 (562)
Q Consensus       342 g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~---~l~e~~i~~I~~QIl~aL~yLH~~~~I  418 (562)
                         ||+++.+++.|..             ++..|+||||+.||++.+.+.   .+++..+..++.|++.||.|||+ .+|
T Consensus        56 ---~~~i~~~~~~~~~-------------~~~~~lv~e~~~~~~L~~~i~~~~~l~~~~~~~i~~qi~~al~~lH~-~~i  118 (279)
T cd05633          56 ---CPFIVCMTYAFHT-------------PDKLCFILDLMNGGDLHYHLSQHGVFSEKEMRFYATEIILGLEHMHN-RFV  118 (279)
T ss_pred             ---CCcEeEEEEEEec-------------CCeEEEEEecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHH-CCc
Confidence               4999999888865             458999999999998765553   48999999999999999999999 799


Q ss_pred             EeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecC---CcEEEeecCCCccccCC-C-CCcHHH
Q psy9184         419 EHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVG---EKICYYDLSQDEELFEG-E-GDYQFD  493 (562)
Q Consensus       419 iHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~---~g~v~~~l~~~pelF~g-~-~~~q~d  493 (562)
                      +||||||+|||++.++                    .++|+|||++.....   .....+..|++||.+.+ . .+.+.|
T Consensus       119 vH~dikp~Nil~~~~~--------------------~~~l~dfg~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~D  178 (279)
T cd05633         119 VYRDLKPANILLDEHG--------------------HVRISDLGLACDFSKKKPHASVGTHGYMAPEVLQKGTAYDSSAD  178 (279)
T ss_pred             CCCCCCHHHEEECCCC--------------------CEEEccCCcceeccccCccCcCCCcCccCHHHhcCCCCCCchhh
Confidence            9999999999998876                    799999999976543   22345677899998753 3 456689


Q ss_pred             HHHHhhcccCCCCCCCCCC
Q psy9184         494 MYRMMRKQCQNNWQNFTPK  512 (562)
Q Consensus       494 Iy~lm~~~~~~~W~~~~P~  512 (562)
                      ||++. ......+.+..|+
T Consensus       179 i~slG-~~l~~l~~g~~pf  196 (279)
T cd05633         179 WFSLG-CMLFKLLRGHSPF  196 (279)
T ss_pred             hHHHH-HHHHHHHhCCCCc
Confidence            98863 3333333444444

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi

>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase

Probab=99.87  E-value=6.6e-22  Score=197.37  Aligned_cols=178  Identities=19%  Similarity=0.234  Sum_probs=140.9

Q ss_pred             eeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCcccccccccccCC
Q psy9184         269 IGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTELLKCSCVRG  342 (562)
Q Consensus       269 LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~l~~~~iv~g  342 (562)
                      ||.|+||.||+|      +.+|+|++....     .......+.+.+|+.+++.++|                       
T Consensus         1 lg~g~~~~v~~~~~~~~~~~~~iK~~~~~~-----~~~~~~~~~~~~e~~~l~~l~h-----------------------   52 (262)
T cd05572           1 LGVGGFGRVELVKVKSKNRTFALKCVKKRH-----IVETGQQEHIFSEKEILEECNH-----------------------   52 (262)
T ss_pred             CCCCCceEEEEEEECCCCcEEEEEEEehhc-----chhhhHHHHHHHHHHHHHhCCC-----------------------
Confidence            799999999999      789999998653     2223344678899999999998                       


Q ss_pred             CCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc---cCCHHHHHHHHHHHHHHHHHHHhhCCeE
Q psy9184         343 RYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK---YRSPNQTYAMILQVVFSLAVAEVELEFE  419 (562)
Q Consensus       343 ~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~---~l~e~~i~~I~~QIl~aL~yLH~~~~Ii  419 (562)
                         |||+++++.+.+             +..+|++|||+++|++.+.+.   .+++..+..++.||+.||.|||+ .+++
T Consensus        53 ---~~i~~~~~~~~~-------------~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~~i~~~l~~lH~-~~~~  115 (262)
T cd05572          53 ---PFIVKLYRTFKD-------------KKYIYMLMEYCLGGELWTILRDRGLFDEYTARFYIACVVLAFEYLHN-RGII  115 (262)
T ss_pred             ---CCEeeeeeeEEc-------------CCccEEEEecCCCCcHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhh-CCcc
Confidence               999999988765             558999999999998876664   37899999999999999999999 7999


Q ss_pred             eccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecCC----cEEEeecCCCccccCCC-CCcHHHH
Q psy9184         420 HRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVGE----KICYYDLSQDEELFEGE-GDYQFDM  494 (562)
Q Consensus       420 HRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~~----g~v~~~l~~~pelF~g~-~~~q~dI  494 (562)
                      |+||||+||+++.++                    .++|+|||+++.....    ....+..|++||.+.+. .+...|+
T Consensus       116 h~dl~~~nilv~~~~--------------------~~~l~df~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di  175 (262)
T cd05572         116 YRDLKPENLLLDSNG--------------------YVKLVDFGFAKKLKSGQKTWTFCGTPEYVAPEIILNKGYDFSVDY  175 (262)
T ss_pred             cCCCCHHHEEEcCCC--------------------CEEEeeCCcccccCcccccccccCCcCccChhHhcCCCCCChhhh
Confidence            999999999998876                    7999999999877542    12335678899987663 4556888


Q ss_pred             HHHhhcccCCCCCCCCCC
Q psy9184         495 YRMMRKQCQNNWQNFTPK  512 (562)
Q Consensus       495 y~lm~~~~~~~W~~~~P~  512 (562)
                      |.+. ......+.+..|+
T Consensus       176 ~slG-~il~~l~~g~~p~  192 (262)
T cd05572         176 WSLG-ILLYELLTGRPPF  192 (262)
T ss_pred             hhhH-HHHHHHHhCCCCc
Confidence            8753 3332334444454

Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi

>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10

Probab=99.87  E-value=7.1e-22  Score=197.93  Aligned_cols=235  Identities=21%  Similarity=0.274  Sum_probs=164.9

Q ss_pred             CCceeeeeeccCceEEEEE-------eeEEEEEeecCCCCCCc--chhHHHHHHHHHHHHHHHh-cCCccccCCCCCCcc
Q psy9184         262 ALKNCKKIGEGVYGEVFKL-------NNSVIKIMPIEGDQSVN--GEEQKKFREIFSEIMVTKE-TSDLQYRTENSTPCF  331 (562)
Q Consensus       262 ~y~~~~~LG~GsfG~Vyka-------~~vAIKii~~~~~~~~~--~~~~~~~~~il~Ei~ilk~-L~h~~~~~~n~~p~f  331 (562)
                      .|++.+.||+|+||.||+|       +.+|+|.+.........  ........++.+|+.++.+ ++|            
T Consensus         1 ~y~~~~~ig~G~~~~v~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~~h------------   68 (269)
T cd08528           1 EYAVLEHLGSGAFGCVYKVRKKNNGQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVTIIKEQLRH------------   68 (269)
T ss_pred             CchhhhhhcCCCCceEEEEEEcCCCCceeeeeEeeccccccccccccchHHHHHHHHHHHHHhhcCCC------------
Confidence            3778899999999999999       66999998754321110  1233455677889988875 666            


Q ss_pred             cccccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc-------cCCHHHHHHHHHH
Q psy9184         332 TELLKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK-------YRSPNQTYAMILQ  404 (562)
Q Consensus       332 v~l~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~-------~l~e~~i~~I~~Q  404 (562)
                                    |||+++++.+..             ++..|++|||+.|+++.+.+.       .+++..++.++.|
T Consensus        69 --------------~~i~~~~~~~~~-------------~~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~  121 (269)
T cd08528          69 --------------PNIVRYYKTFLE-------------NDRLYIVMDLIEGAPLGEHFNSLKEKKQRFTEERIWNIFVQ  121 (269)
T ss_pred             --------------CCeeeEEeeEcc-------------CCeEEEEEecCCCCcHHHHHHHHHhccCCCCHHHHHHHHHH
Confidence                          999999998865             568999999999988765442       3789999999999


Q ss_pred             HHHHHHHHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecCC----cEEEeecCCC
Q psy9184         405 VVFSLAVAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVGE----KICYYDLSQD  480 (562)
Q Consensus       405 Il~aL~yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~~----g~v~~~l~~~  480 (562)
                      ++.||.|||+..+|+||||||+|||++.++                    .++|+|||++......    ....+..|.+
T Consensus       122 l~~~l~~lh~~~~i~H~dl~~~nil~~~~~--------------------~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~  181 (269)
T cd08528         122 MVLALRYLHKEKRIVHRDLTPNNIMLGEDD--------------------KVTITDFGLAKQKQPESKLTSVVGTILYSC  181 (269)
T ss_pred             HHHHHHHhccCCceeecCCCHHHEEECCCC--------------------cEEEecccceeecccccccccccCcccCcC
Confidence            999999999645899999999999998876                    7999999999876543    2334556888


Q ss_pred             ccccCCC-CCcHHHHHHHhhcccCCCCCCCCCCChhhhHHHHHHHHhhcccCCCCCCCchhHHHHHHHHHHHhcCCCcCc
Q psy9184         481 EELFEGE-GDYQFDMYRMMRKQCQNNWQNFTPKNNVFWIHYLVDKATCLKKGYQYLRAPRHQAFELLEELGQNALHFDSC  559 (562)
Q Consensus       481 pelF~g~-~~~q~dIy~lm~~~~~~~W~~~~P~tn~~wl~yl~~~Ll~~~~~~~~~~~~~~~~~~~l~~l~~~~l~~~s~  559 (562)
                      ||.+.+. ...+.|+|++ |......+.+..|+....... .......  ..+.+...  ......+.+|...+++.++.
T Consensus       182 Pe~~~~~~~~~~~Dv~sl-G~ll~~l~~g~~p~~~~~~~~-~~~~~~~--~~~~~~~~--~~~~~~l~~li~~cl~~~p~  255 (269)
T cd08528         182 PEIVKNEPYGEKADVWAF-GCILYQMCTLQPPFYSTNMLS-LATKIVE--AVYEPLPE--GMYSEDVTDVITSCLTPDAE  255 (269)
T ss_pred             hhhhcCCCCchHHHHHHH-HHHHHHHHhCCCcccccCHHH-HHHHHhh--ccCCcCCc--ccCCHHHHHHHHHHCCCCCc
Confidence            9988763 4556899886 444434555555654332121 1122222  11111111  01234677788888888776


Q ss_pred             CC
Q psy9184         560 YE  561 (562)
Q Consensus       560 ~~  561 (562)
                      .|
T Consensus       256 ~R  257 (269)
T cd08528         256 AR  257 (269)
T ss_pred             cC
Confidence            54

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.

>PLN00009 cyclin-dependent kinase A; Provisional

Probab=99.87  E-value=1.1e-21  Score=199.63  Aligned_cols=185  Identities=19%  Similarity=0.285  Sum_probs=142.4

Q ss_pred             CCCceeeeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCccccc
Q psy9184         261 SALKNCKKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTEL  334 (562)
Q Consensus       261 ~~y~~~~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~l  334 (562)
                      ++|++.+.||+|+||.||+|      +.||+|.+.....      .......+.+|+.+++.++|               
T Consensus         2 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~------~~~~~~~~~~e~~~l~~l~h---------------   60 (294)
T PLN00009          2 DQYEKVEKIGEGTYGVVYKARDRVTNETIALKKIRLEQE------DEGVPSTAIREISLLKEMQH---------------   60 (294)
T ss_pred             CceEEEEEecCCCCEEEEEEEecCCCcEEEEEehhhccc------cccchHHHHHHHHHHHhccC---------------
Confidence            46899999999999999999      6899999876431      12233567789999999998               


Q ss_pred             ccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCcccccc-----CCHHHHHHHHHHHHHHH
Q psy9184         335 LKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIKY-----RSPNQTYAMILQVVFSL  409 (562)
Q Consensus       335 ~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~~-----l~e~~i~~I~~QIl~aL  409 (562)
                                 |||+++++++.+             +...|+||||+. +.+...+..     +++..+..++.||+.||
T Consensus        61 -----------~~i~~~~~~~~~-------------~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL  115 (294)
T PLN00009         61 -----------GNIVRLQDVVHS-------------EKRLYLVFEYLD-LDLKKHMDSSPDFAKNPRLIKTYLYQILRGI  115 (294)
T ss_pred             -----------CCEeeEEEEEec-------------CCeEEEEEeccc-ccHHHHHHhCCCCCcCHHHHHHHHHHHHHHH
Confidence                       999999998875             558999999996 456554432     57888999999999999


Q ss_pred             HHHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecC-----CcEEEeecCCCcccc
Q psy9184         410 AVAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVG-----EKICYYDLSQDEELF  484 (562)
Q Consensus       410 ~yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~-----~g~v~~~l~~~pelF  484 (562)
                      +|||+ .+|+||||+|+||+++..+.                   .+||+|||+++....     .....+..|++||.+
T Consensus       116 ~~LH~-~~i~H~dl~p~nill~~~~~-------------------~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~~PE~~  175 (294)
T PLN00009        116 AYCHS-HRVLHRDLKPQNLLIDRRTN-------------------ALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEIL  175 (294)
T ss_pred             HHHHh-CCeeCCCCCcceEEEECCCC-------------------EEEEcccccccccCCCccccccCceeecccCHHHH
Confidence            99999 79999999999999986542                   699999999976532     122345678899987


Q ss_pred             CCC--CCcHHHHHHHhhcccCCCCCCCCCC
Q psy9184         485 EGE--GDYQFDMYRMMRKQCQNNWQNFTPK  512 (562)
Q Consensus       485 ~g~--~~~q~dIy~lm~~~~~~~W~~~~P~  512 (562)
                      .+.  ...+.|+|++. ......+.+..|+
T Consensus       176 ~~~~~~~~~~Dv~slG-~i~~~l~tg~~pf  204 (294)
T PLN00009        176 LGSRHYSTPVDIWSVG-CIFAEMVNQKPLF  204 (294)
T ss_pred             hCCCCCCcHHHHHHHH-HHHHHHHhCCCCC
Confidence            663  35569998863 3333344455454

>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85

Probab=99.87  E-value=5.5e-22  Score=200.03  Aligned_cols=182  Identities=18%  Similarity=0.281  Sum_probs=142.4

Q ss_pred             CCceeeeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCcccccc
Q psy9184         262 ALKNCKKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTELL  335 (562)
Q Consensus       262 ~y~~~~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~l~  335 (562)
                      +|+..++||.|+||.||+|      ..||+|++.....       ......+.+|+.+++.++|                
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~-------~~~~~~~~~E~~~l~~l~h----------------   57 (284)
T cd07836           1 NFKQLEKLGEGTYATVYKGRNRTTGEIVALKEIHLDAE-------EGTPSTAIREISLMKELKH----------------   57 (284)
T ss_pred             CceEeeeeccCCceEEEEEEECCCCeEEEEEEeccccc-------ccchHHHHHHHHHHHhhcC----------------
Confidence            4788999999999999999      6799999986531       1223456789999999988                


Q ss_pred             cccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc------cCCHHHHHHHHHHHHHHH
Q psy9184         336 KCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK------YRSPNQTYAMILQVVFSL  409 (562)
Q Consensus       336 ~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~------~l~e~~i~~I~~QIl~aL  409 (562)
                                |||+++++.+..             .+..|+||||+.+ ++.+.+.      .+++..+..++.||+.||
T Consensus        58 ----------~~i~~~~~~~~~-------------~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~l  113 (284)
T cd07836          58 ----------ENIVRLHDVIHT-------------ENKLMLVFEYMDK-DLKKYMDTHGVRGALDPNTVKSFTYQLLKGI  113 (284)
T ss_pred             ----------CCEeeeeeeEee-------------CCcEEEEEecCCc-cHHHHHHhcCCCCCcCHHHHHHHHHHHHHHH
Confidence                      999999998875             4588999999985 5554432      378999999999999999


Q ss_pred             HHHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecC-----CcEEEeecCCCcccc
Q psy9184         410 AVAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVG-----EKICYYDLSQDEELF  484 (562)
Q Consensus       410 ~yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~-----~g~v~~~l~~~pelF  484 (562)
                      .|||+ .||+||||||+||+++.++                    .++|+|||+++....     .....+..|++||.+
T Consensus       114 ~~lH~-~~i~h~dl~p~ni~~~~~~--------------------~~~l~d~g~~~~~~~~~~~~~~~~~~~~y~~PE~~  172 (284)
T cd07836         114 AFCHE-NRVLHRDLKPQNLLINKRG--------------------ELKLADFGLARAFGIPVNTFSNEVVTLWYRAPDVL  172 (284)
T ss_pred             HHHHH-CCeeeCCCCHHHEEECCCC--------------------cEEEeecchhhhhcCCccccccccccccccChHHh
Confidence            99999 7999999999999999876                    799999999976532     123345668899988


Q ss_pred             CCC--CCcHHHHHHHhhcccCCCCCCCCCC
Q psy9184         485 EGE--GDYQFDMYRMMRKQCQNNWQNFTPK  512 (562)
Q Consensus       485 ~g~--~~~q~dIy~lm~~~~~~~W~~~~P~  512 (562)
                      .+.  .....|+|++ |......+.+..|+
T Consensus       173 ~~~~~~~~~~Dv~sl-G~~l~~l~~g~~~~  201 (284)
T cd07836         173 LGSRTYSTSIDIWSV-GCIMAEMITGRPLF  201 (284)
T ss_pred             cCCCCCCcHHHHHHH-HHHHHHHHhCCCCC
Confidence            664  3456899886 33333344444444

Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.

>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase

Probab=99.87  E-value=1.8e-21  Score=191.86  Aligned_cols=227  Identities=20%  Similarity=0.273  Sum_probs=166.8

Q ss_pred             CCceeeeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCcccccc
Q psy9184         262 ALKNCKKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTELL  335 (562)
Q Consensus       262 ~y~~~~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~l~  335 (562)
                      +|.+.+.||.|+||.||++      ..+|+|++....      ........+.+|+.+++.++|                
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~------~~~~~~~~~~~e~~~l~~l~~----------------   58 (258)
T cd08215           1 KYEIIKQIGKGSFGKVYLVRRKSDGKLYVLKEIDLSN------MSEKEREDALNEVKILKKLNH----------------   58 (258)
T ss_pred             CceEEeeeccCCCeEEEEEEEcCCCcEEEEEEeeccc------CChHHHHHHHHHHHHHHhcCC----------------
Confidence            4788999999999999999      789999998653      123445678899999999998                


Q ss_pred             cccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc-------cCCHHHHHHHHHHHHHH
Q psy9184         336 KCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK-------YRSPNQTYAMILQVVFS  408 (562)
Q Consensus       336 ~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~-------~l~e~~i~~I~~QIl~a  408 (562)
                                ||++++.+.+..             .+..+++||+++++++.+.+.       .+++.++..++.|++.|
T Consensus        59 ----------~~~~~~~~~~~~-------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~  115 (258)
T cd08215          59 ----------PNIIKYYESFEE-------------KGKLCIVMEYADGGDLSQKIKKQKKEGKPFPEEQILDWFVQLCLA  115 (258)
T ss_pred             ----------CChhheEEEEec-------------CCEEEEEEEecCCCcHHHHHHHhhccCCCcCHHHHHHHHHHHHHH
Confidence                      999998888764             468999999999888766552       37899999999999999


Q ss_pred             HHHHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecCCc-----EEEeecCCCccc
Q psy9184         409 LAVAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVGEK-----ICYYDLSQDEEL  483 (562)
Q Consensus       409 L~yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~~g-----~v~~~l~~~pel  483 (562)
                      |.|||+ .|++|+||+|+||+++.++                    .++|+|||++.......     ..+...|++||.
T Consensus       116 l~~lh~-~~~~H~dl~~~nil~~~~~--------------------~~~l~d~~~~~~~~~~~~~~~~~~~~~~y~~pe~  174 (258)
T cd08215         116 LKYLHS-RKILHRDIKPQNIFLTSNG--------------------LVKLGDFGISKVLSSTVDLAKTVVGTPYYLSPEL  174 (258)
T ss_pred             HHHHHh-CCEecccCChHHeEEcCCC--------------------cEEECCccceeecccCcceecceeeeecccChhH
Confidence            999999 7999999999999999876                    79999999998765532     344667888987


Q ss_pred             cCCC-CCcHHHHHHHhhcccCCCCCCCCCCChhhhHHHHHHHHhhcccCCCCCCCchhHHHHHHHHHHHhcCCCcCcCC
Q psy9184         484 FEGE-GDYQFDMYRMMRKQCQNNWQNFTPKNNVFWIHYLVDKATCLKKGYQYLRAPRHQAFELLEELGQNALHFDSCYE  561 (562)
Q Consensus       484 F~g~-~~~q~dIy~lm~~~~~~~W~~~~P~tn~~wl~yl~~~Ll~~~~~~~~~~~~~~~~~~~l~~l~~~~l~~~s~~~  561 (562)
                      +.+. .....|+|++.-. ....+.+..|+.... ..-+...+.. . .+.....   ..-..+..+.+.+|..+...|
T Consensus       175 ~~~~~~~~~~Dv~slG~~-~~~l~~g~~p~~~~~-~~~~~~~~~~-~-~~~~~~~---~~~~~~~~~i~~~l~~~p~~R  246 (258)
T cd08215         175 CQNKPYNYKSDIWSLGCV-LYELCTLKHPFEGEN-LLELALKILK-G-QYPPIPS---QYSSELRNLVSSLLQKDPEER  246 (258)
T ss_pred             hccCCCCccccHHHHHHH-HHHHHcCCCCCCCCc-HHHHHHHHhc-C-CCCCCCC---CCCHHHHHHHHHHcCCChhhC
Confidence            6653 4455888875432 323344555553332 2233333333 1 1222111   113467778888888877665

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They

>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4

Probab=99.87  E-value=6.1e-22  Score=203.20  Aligned_cols=172  Identities=22%  Similarity=0.220  Sum_probs=136.6

Q ss_pred             CCCCCceeeeeeccCceEEEEE----------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCC
Q psy9184         259 PSSALKNCKKIGEGVYGEVFKL----------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENST  328 (562)
Q Consensus       259 ~~~~y~~~~~LG~GsfG~Vyka----------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~  328 (562)
                      ...+|+..+.||+|+||.||+|          ..+|+|.+....       .......+.+|+.+++.++|         
T Consensus         5 ~~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~vaiK~~~~~~-------~~~~~~~~~~e~~~~~~l~h---------   68 (303)
T cd05110           5 KETELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETT-------GPKANVEFMDEALIMASMDH---------   68 (303)
T ss_pred             chhhceeccccccCCCccEEEEEEecCCCcceeeEEEEeccccC-------CHHHHHHHHHHHHHHHhCCC---------
Confidence            4567899999999999999999          247888887542       12333467899999999998         


Q ss_pred             CcccccccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc----cCCHHHHHHHHHH
Q psy9184         329 PCFTELLKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK----YRSPNQTYAMILQ  404 (562)
Q Consensus       329 p~fv~l~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~----~l~e~~i~~I~~Q  404 (562)
                                       |||+++++.+..              ...++++||+++|++.+.+.    .+++..+..++.|
T Consensus        69 -----------------~niv~~~~~~~~--------------~~~~~v~e~~~~g~l~~~~~~~~~~~~~~~~~~~~~q  117 (303)
T cd05110          69 -----------------PHLVRLLGVCLS--------------PTIQLVTQLMPHGCLLDYVHEHKDNIGSQLLLNWCVQ  117 (303)
T ss_pred             -----------------CCcccEEEEEcC--------------CCceeeehhcCCCCHHHHHHhcccCCCHHHHHHHHHH
Confidence                             999999887753              24679999999998877664    3788999999999


Q ss_pred             HHHHHHHHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecCC-------cEEEeec
Q psy9184         405 VVFSLAVAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVGE-------KICYYDL  477 (562)
Q Consensus       405 Il~aL~yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~~-------g~v~~~l  477 (562)
                      |+.||.|||+ .+|+||||||+|||++.++                    .+||+|||+++.....       +...+..
T Consensus       118 i~~~L~~LH~-~~ivH~dikp~Nill~~~~--------------------~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~  176 (303)
T cd05110         118 IAKGMMYLEE-RRLVHRDLAARNVLVKSPN--------------------HVKITDFGLARLLEGDEKEYNADGGKMPIK  176 (303)
T ss_pred             HHHHHHHHhh-cCeeccccccceeeecCCC--------------------ceEEccccccccccCcccccccCCCccccc
Confidence            9999999999 7999999999999998775                    6999999999875431       1222346


Q ss_pred             CCCccccCCC-CCcHHHHHHHh
Q psy9184         478 SQDEELFEGE-GDYQFDMYRMM  498 (562)
Q Consensus       478 ~~~pelF~g~-~~~q~dIy~lm  498 (562)
                      |++||.+.+. .+...|||++.
T Consensus       177 y~~PE~~~~~~~~~~~DiwslG  198 (303)
T cd05110         177 WMALECIHYRKFTHQSDVWSYG  198 (303)
T ss_pred             cCCHHHhccCCCChHHHHHHHH
Confidence            7888887663 45568888854

Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin

>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1

Probab=99.87  E-value=3e-22  Score=203.64  Aligned_cols=186  Identities=19%  Similarity=0.233  Sum_probs=143.3

Q ss_pred             CCCceeeeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCccccc
Q psy9184         261 SALKNCKKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTEL  334 (562)
Q Consensus       261 ~~y~~~~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~l  334 (562)
                      ++|+..+.||.|+||.||+|      +.+|+|.++....      .......+.+|+.+++.++|               
T Consensus         5 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~------~~~~~~~~~~e~~~l~~l~h---------------   63 (293)
T cd07843           5 DEYEKLNRIEEGTYGVVYRARDKKTGEIVALKKLKMEKE------KEGFPITSLREINILLKLQH---------------   63 (293)
T ss_pred             hhhhhhhhhcCCCCeEEEEEEECCCCcEEEEEEEeeccc------cccchhhHHHHHHHHHhcCC---------------
Confidence            46888999999999999999      6799999986531      12223456789999999998               


Q ss_pred             ccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc----cCCHHHHHHHHHHHHHHHH
Q psy9184         335 LKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK----YRSPNQTYAMILQVVFSLA  410 (562)
Q Consensus       335 ~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~----~l~e~~i~~I~~QIl~aL~  410 (562)
                                 |||+++++++....           .+.+|+||||+.+ ++.+.+.    .+++.+++.++.||+.||.
T Consensus        64 -----------~ni~~~~~~~~~~~-----------~~~~~lv~e~~~~-~L~~~~~~~~~~l~~~~~~~i~~qi~~aL~  120 (293)
T cd07843          64 -----------PNIVTVKEVVVGSN-----------LDKIYMVMEYVEH-DLKSLMETMKQPFLQSEVKCLMLQLLSGVA  120 (293)
T ss_pred             -----------CCEEEEEEEEEecC-----------CCcEEEEehhcCc-CHHHHHHhccCCCCHHHHHHHHHHHHHHHH
Confidence                       99999988876421           2689999999974 4544332    3899999999999999999


Q ss_pred             HHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecCC-----cEEEeecCCCccccC
Q psy9184         411 VAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVGE-----KICYYDLSQDEELFE  485 (562)
Q Consensus       411 yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~~-----g~v~~~l~~~pelF~  485 (562)
                      |||+ .+|+||||||+|||++.++                    .++|+|||+++.....     ....+..|++||.+.
T Consensus       121 ~LH~-~~i~H~dl~p~nili~~~~--------------------~~~l~d~g~~~~~~~~~~~~~~~~~~~~~~aPE~~~  179 (293)
T cd07843         121 HLHD-NWILHRDLKTSNLLLNNRG--------------------ILKICDFGLAREYGSPLKPYTQLVVTLWYRAPELLL  179 (293)
T ss_pred             HHHH-CCeeeccCCHHHEEECCCC--------------------cEEEeecCceeeccCCccccccccccccccCchhhc
Confidence            9999 7999999999999999886                    7999999999876542     233456689999887


Q ss_pred             CCC--CcHHHHHHHhhcccCCCCCCCCCC
Q psy9184         486 GEG--DYQFDMYRMMRKQCQNNWQNFTPK  512 (562)
Q Consensus       486 g~~--~~q~dIy~lm~~~~~~~W~~~~P~  512 (562)
                      +..  ....|||++.-. ....+.+..|+
T Consensus       180 ~~~~~~~~~Di~slG~~-l~~l~~g~~~f  207 (293)
T cd07843         180 GAKEYSTAIDMWSVGCI-FAELLTKKPLF  207 (293)
T ss_pred             CCccccchhhHHHHHHH-HHHHHhCCCCC
Confidence            643  456899886433 22333444443

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the

>smart00219 TyrKc Tyrosine kinase, catalytic domain

Probab=99.87  E-value=1.2e-21  Score=193.79  Aligned_cols=224  Identities=19%  Similarity=0.199  Sum_probs=158.3

Q ss_pred             ceeeeeeccCceEEEEE----------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCcccc
Q psy9184         264 KNCKKIGEGVYGEVFKL----------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTE  333 (562)
Q Consensus       264 ~~~~~LG~GsfG~Vyka----------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~  333 (562)
                      ++.+.||.|+||.||+|          ..+|+|++....       .......+..|+.+++.++|              
T Consensus         2 ~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~-------~~~~~~~~~~e~~~l~~l~~--------------   60 (258)
T smart00219        2 TLGKKLGEGAFGEVYKGTLKGLSGEKEVEVAVKTLKEDA-------DEQQIEEFLREARIMRKLDH--------------   60 (258)
T ss_pred             cccceeccCCCcceEEEEecCCCCCCCceEEEEEccCCC-------ChHHHHHHHHHHHHHHhcCC--------------
Confidence            56789999999999999          348999987543       12245678899999999977              


Q ss_pred             cccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCcccccc-----CCHHHHHHHHHHHHHH
Q psy9184         334 LLKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIKY-----RSPNQTYAMILQVVFS  408 (562)
Q Consensus       334 l~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~~-----l~e~~i~~I~~QIl~a  408 (562)
                                  +||+++++.+.+             .+..|++||++++|++.+.+..     +++.++..++.||+.|
T Consensus        61 ------------~~i~~~~~~~~~-------------~~~~~~i~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ql~~~  115 (258)
T smart00219       61 ------------PNIVKLLGVCTE-------------EEPLMIVMEYMEGGDLLDYLRKNRPKELSLSDLLSFALQIARG  115 (258)
T ss_pred             ------------CchheEEEEEcC-------------CCeeEEEEeccCCCCHHHHHHhhhhccCCHHHHHHHHHHHHHH
Confidence                        999999998875             4589999999999887666532     8999999999999999


Q ss_pred             HHHHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecCCcE------EEeecCCCcc
Q psy9184         409 LAVAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVGEKI------CYYDLSQDEE  482 (562)
Q Consensus       409 L~yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~~g~------v~~~l~~~pe  482 (562)
                      |+|||+ .+++||||||+||+++.++                    .++|+|||+++.......      .++..|++||
T Consensus       116 l~~lh~-~~~~h~dl~~~nil~~~~~--------------------~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~~Pe  174 (258)
T smart00219      116 MEYLES-KNFIHRDLAARNCLVGENL--------------------VVKISDFGLSRDLYDDDYYKKKGGKLPIRWMAPE  174 (258)
T ss_pred             HHHHhc-CCeeecccccceEEEccCC--------------------eEEEcccCCceecccccccccccCCCcccccChH
Confidence            999999 7999999999999999886                    799999999987654211      1234577888


Q ss_pred             ccCC-CCCcHHHHHHHhhcccCCCC-CCCCCCChhhhHHHHHHHHhhcccCCCCCCCchhHHHHHHHHHHHhcCCCcCcC
Q psy9184         483 LFEG-EGDYQFDMYRMMRKQCQNNW-QNFTPKNNVFWIHYLVDKATCLKKGYQYLRAPRHQAFELLEELGQNALHFDSCY  560 (562)
Q Consensus       483 lF~g-~~~~q~dIy~lm~~~~~~~W-~~~~P~tn~~wl~yl~~~Ll~~~~~~~~~~~~~~~~~~~l~~l~~~~l~~~s~~  560 (562)
                      .+.+ ..+...|+|++.-... ..+ .+..|+.... ...+.+.... ......+..    .-..+.++...+|..+...
T Consensus       175 ~~~~~~~~~~~Di~slG~i~~-~l~~~g~~p~~~~~-~~~~~~~~~~-~~~~~~~~~----~~~~~~~~i~~~l~~~p~~  247 (258)
T smart00219      175 SLKDGKFTSKSDVWSFGVLLW-EIFTLGESPYPGMS-NEEVLEYLKK-GYRLPKPEN----CPPEIYKLMLQCWAEDPED  247 (258)
T ss_pred             HhccCCCCcchhHHHHHHHHH-HHHhCCCCCCCCCC-HHHHHHHHhc-CCCCCCCCc----CCHHHHHHHHHHCcCChhh
Confidence            7754 3556689988643332 111 1333432211 1112222222 111111111    2345667788888877665


Q ss_pred             C
Q psy9184         561 E  561 (562)
Q Consensus       561 ~  561 (562)
                      |
T Consensus       248 R  248 (258)
T smart00219      248 R  248 (258)
T ss_pred             C
Confidence            5

Phosphotransferases. Tyrosine-specific kinase subfamily.

>KOG0603|consensus

Probab=99.87  E-value=1.5e-22  Score=219.42  Aligned_cols=222  Identities=15%  Similarity=0.138  Sum_probs=172.5

Q ss_pred             CCCCceeeeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCcccc
Q psy9184         260 SSALKNCKKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTE  333 (562)
Q Consensus       260 ~~~y~~~~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~  333 (562)
                      ...|.....+|.|+||.|-.|      +..++|++....            .+..+|+.++....+              
T Consensus       321 ~~~y~~~~~~~~gs~s~~~~~~~~~t~~~~~vkii~~~~------------~~~~~e~~~~~~~~~--------------  374 (612)
T KOG0603|consen  321 TESYEFREELGEGSFSAVKYCESSPTDQEPAVKIISKRA------------DDNQDEIPISLLVRD--------------  374 (612)
T ss_pred             chhhccccccCCCCccceeeeeccccccchhheeccccc------------cccccccchhhhhcC--------------
Confidence            356788888999999999999      899999998763            123467777777766              


Q ss_pred             cccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccccC--CHHHHHHHHHHHHHHHHH
Q psy9184         334 LLKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIKYR--SPNQTYAMILQVVFSLAV  411 (562)
Q Consensus       334 l~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~~l--~e~~i~~I~~QIl~aL~y  411 (562)
                                 ||||+++.+.|.+             +.+.|+|||++.||.+++.+...  ...++..|++||+.|+.|
T Consensus       375 -----------h~niv~~~~v~~~-------------~~~~~~v~e~l~g~ell~ri~~~~~~~~e~~~w~~~lv~Av~~  430 (612)
T KOG0603|consen  375 -----------HPNIVKSHDVYED-------------GKEIYLVMELLDGGELLRRIRSKPEFCSEASQWAAELVSAVDY  430 (612)
T ss_pred             -----------CCcceeecceecC-------------CceeeeeehhccccHHHHHHHhcchhHHHHHHHHHHHHHHHHH
Confidence                       7999999999986             55899999999999999988653  336888899999999999


Q ss_pred             HHhhCCeEeccCCCCCEEEc-cCCCCCcccccCCcccccccCCceEEEEeccceeeecCC--cEEEeecCCCccccCC-C
Q psy9184         412 AEVELEFEHRDLHMSNILVL-QTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVGE--KICYYDLSQDEELFEG-E  487 (562)
Q Consensus       412 LH~~~~IiHRDLKpeNILl~-~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~~--g~v~~~l~~~pelF~g-~  487 (562)
                      ||+ +||+||||||+|||++ ..+                    +++|+|||.++.....  +..++..|.+||+... .
T Consensus       431 LH~-~gvvhRDLkp~NIL~~~~~g--------------------~lrltyFG~a~~~~~~~~tp~~t~~y~APEvl~~~~  489 (612)
T KOG0603|consen  431 LHE-QGVVHRDLKPGNILLDGSAG--------------------HLRLTYFGFWSELERSCDTPALTLQYVAPEVLAIQE  489 (612)
T ss_pred             HHh-cCeeecCCChhheeecCCCC--------------------cEEEEEechhhhCchhhcccchhhcccChhhhccCC
Confidence            999 7999999999999996 443                    7999999999988875  5567889999999886 3


Q ss_pred             CCcHHHHHHHhhcccCCCCCCCCCCChhhhHHHHHHHHhhcccCCCCCCCchhHHHHHHHHHHHhcCCCcCcCC
Q psy9184         488 GDYQFDMYRMMRKQCQNNWQNFTPKNNVFWIHYLVDKATCLKKGYQYLRAPRHQAFELLEELGQNALHFDSCYE  561 (562)
Q Consensus       488 ~~~q~dIy~lm~~~~~~~W~~~~P~tn~~wl~yl~~~Ll~~~~~~~~~~~~~~~~~~~l~~l~~~~l~~~s~~~  561 (562)
                      ++..+|||+ +|..++.+..+..|+.+..-=.-+..++..  .+|+      .-.-+.-+.|.+.||+++.+.|
T Consensus       490 yt~acD~WS-LGvlLy~ML~G~tp~~~~P~~~ei~~~i~~--~~~s------~~vS~~AKdLl~~LL~~dP~~R  554 (612)
T KOG0603|consen  490 YTEACDWWS-LGVLLYEMLTGRTLFAAHPAGIEIHTRIQM--PKFS------ECVSDEAKDLLQQLLQVDPALR  554 (612)
T ss_pred             CCcchhhHH-HHHHHHHHHhCCCccccCCchHHHHHhhcC--Cccc------cccCHHHHHHHHHhccCChhhC
Confidence            566699976 566666777888887544311122222222  2233      1225567888999999998876

>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase

Probab=99.87  E-value=1.8e-21  Score=195.13  Aligned_cols=227  Identities=15%  Similarity=0.084  Sum_probs=157.8

Q ss_pred             CCCceeeeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCccccc
Q psy9184         261 SALKNCKKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTEL  334 (562)
Q Consensus       261 ~~y~~~~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~l  334 (562)
                      +.+.....||+|+||.||+|      ..||+|.+....        ....+.+.+|+.+++.++|               
T Consensus         8 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~~k~~~~~~--------~~~~~~~~~e~~~l~~l~h---------------   64 (268)
T cd06624           8 DENGERVVLGKGTYGIVYAARDLSTQVRIAIKEIPERD--------SRYVQPLHEEIALHSYLKH---------------   64 (268)
T ss_pred             ccCCceEEEecCCceEEEEeEecCCCcEEEEEEecCCC--------HHHHHHHHHHHHHHHhcCC---------------
Confidence            44555679999999999999      579999887543        2334678899999999998               


Q ss_pred             ccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc----cC--CHHHHHHHHHHHHHH
Q psy9184         335 LKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK----YR--SPNQTYAMILQVVFS  408 (562)
Q Consensus       335 ~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~----~l--~e~~i~~I~~QIl~a  408 (562)
                                 +||+++++++..             ++..+++|||+.++++.+.+.    .+  ++..+..++.||+.|
T Consensus        65 -----------~~iv~~~~~~~~-------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~a  120 (268)
T cd06624          65 -----------RNIVQYLGSDSE-------------NGFFKIFMEQVPGGSLSALLRSKWGPLKDNEQTIIFYTKQILEG  120 (268)
T ss_pred             -----------CCeeeeeeeecc-------------CCEEEEEEecCCCCCHHHHHHHhcccCCCcHHHHHHHHHHHHHH
Confidence                       999999988765             568999999999997766553    24  788899999999999


Q ss_pred             HHHHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecCC-----cEEEeecCCCccc
Q psy9184         409 LAVAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVGE-----KICYYDLSQDEEL  483 (562)
Q Consensus       409 L~yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~~-----g~v~~~l~~~pel  483 (562)
                      |+|||+ .||+||||||+||+++....                   .++|+|||++......     ....+..|.+||.
T Consensus       121 l~~lH~-~~i~h~dl~p~nil~~~~~~-------------------~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~aPE~  180 (268)
T cd06624         121 LKYLHD-NQIVHRDIKGDNVLVNTYSG-------------------VVKISDFGTSKRLAGINPCTETFTGTLQYMAPEV  180 (268)
T ss_pred             HHHHHH-CCEeecCCCHHHEEEcCCCC-------------------eEEEecchhheecccCCCccccCCCCccccChhh
Confidence            999999 79999999999999986432                   7999999999765431     1123456788998


Q ss_pred             cCCC---CCcHHHHHHHhhcccCCCCCCCCCCChhhhHHH--HHHHHhhcccCCCCCCCchhHHHHHHHHHHHhcCCCcC
Q psy9184         484 FEGE---GDYQFDMYRMMRKQCQNNWQNFTPKNNVFWIHY--LVDKATCLKKGYQYLRAPRHQAFELLEELGQNALHFDS  558 (562)
Q Consensus       484 F~g~---~~~q~dIy~lm~~~~~~~W~~~~P~tn~~wl~y--l~~~Ll~~~~~~~~~~~~~~~~~~~l~~l~~~~l~~~s  558 (562)
                      +.+.   .....|+|++.- .....+.+..|+........  ....+......++.      .....+..|...++..+.
T Consensus       181 ~~~~~~~~~~~~Dv~slGv-vl~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~li~~~l~~~p  253 (268)
T cd06624         181 IDKGPRGYGAPADIWSLGC-TIVEMATGKPPFIELGEPQAAMFKVGMFKIHPEIPE------SLSAEAKNFILRCFEPDP  253 (268)
T ss_pred             hccccccCCchhhhHHHHH-HHHHHHhCCCCCccccChhhhHhhhhhhccCCCCCc------ccCHHHHHHHHHHcCCCc
Confidence            7552   345688887533 33334445555432211000  00111110011111      124567778888888776


Q ss_pred             cCC
Q psy9184         559 CYE  561 (562)
Q Consensus       559 ~~~  561 (562)
                      ..|
T Consensus       254 ~~R  256 (268)
T cd06624         254 DKR  256 (268)
T ss_pred             hhC
Confidence            655

Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina

>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains

Probab=99.87  E-value=1.2e-21  Score=193.78  Aligned_cols=227  Identities=20%  Similarity=0.257  Sum_probs=165.1

Q ss_pred             CCceeeeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCcccccc
Q psy9184         262 ALKNCKKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTELL  335 (562)
Q Consensus       262 ~y~~~~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~l~  335 (562)
                      +|++.++||+|+||.||++      +.+|+|.+.....      .......+.+|+.+++.++|                
T Consensus         1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~------~~~~~~~~~~e~~~l~~l~~----------------   58 (256)
T cd08530           1 DFKVLKKLGKGSYGSVYKVKRLSDNQFYALKEVDLGSM------SQKEREDAVNEIRILASVNH----------------   58 (256)
T ss_pred             CceEeeeecCCCceeEEEEEECCCCCEEEEEEEehhhc------cHHHHHHHHHHHHHHHhCCC----------------
Confidence            4788999999999999998      7899999886431      23344677889999999998                


Q ss_pred             cccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc-------cCCHHHHHHHHHHHHHH
Q psy9184         336 KCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK-------YRSPNQTYAMILQVVFS  408 (562)
Q Consensus       336 ~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~-------~l~e~~i~~I~~QIl~a  408 (562)
                                |||+++++.+..             ....|+||||++++++...+.       .+++..++.++.|++.|
T Consensus        59 ----------~~i~~~~~~~~~-------------~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~a  115 (256)
T cd08530          59 ----------PNIISYKEAFLD-------------GNKLCIVMEYAPFGDLSKAISKRKKKRKLIPEQEIWRIFIQLLRG  115 (256)
T ss_pred             ----------CCchhhhhhhcc-------------CCEEEEEehhcCCCCHHHHHHHHHhhcCCCCHHHHHHHHHHHHHH
Confidence                      999999988875             468999999999887765542       37889999999999999


Q ss_pred             HHHHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecCC---cEEEeecCCCccccC
Q psy9184         409 LAVAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVGE---KICYYDLSQDEELFE  485 (562)
Q Consensus       409 L~yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~~---g~v~~~l~~~pelF~  485 (562)
                      |+|||+ .|++||||+|+||+++.++                    .++|+|||+++.....   .......|.+||.+.
T Consensus       116 l~~lh~-~~i~h~~l~~~ni~~~~~~--------------------~~kl~d~g~~~~~~~~~~~~~~~~~~~~~Pe~~~  174 (256)
T cd08530         116 LQALHE-QKILHRDLKSANILLVAND--------------------LVKIGDLGISKVLKKNMAKTQIGTPHYMAPEVWK  174 (256)
T ss_pred             HHHHhh-CCcccCCCCcceEEEecCC--------------------cEEEeeccchhhhccCCcccccCCccccCHHHHC
Confidence            999999 7999999999999999875                    7999999999876542   223345677888876


Q ss_pred             CC-CCcHHHHHHHhhcccCCCCCCCCCCChhhhHHHHHHHHhhcccCCCCCCCchhHHHHHHHHHHHhcCCCcCcCC
Q psy9184         486 GE-GDYQFDMYRMMRKQCQNNWQNFTPKNNVFWIHYLVDKATCLKKGYQYLRAPRHQAFELLEELGQNALHFDSCYE  561 (562)
Q Consensus       486 g~-~~~q~dIy~lm~~~~~~~W~~~~P~tn~~wl~yl~~~Ll~~~~~~~~~~~~~~~~~~~l~~l~~~~l~~~s~~~  561 (562)
                      +. .+...|+|++.-... ..+.+..|+...- ...+......  ..++...   ......+..+...+|+++...|
T Consensus       175 ~~~~~~~~D~~slG~~~~-~l~~g~~p~~~~~-~~~~~~~~~~--~~~~~~~---~~~~~~~~~li~~~l~~~p~~R  244 (256)
T cd08530         175 GRPYSYKSDIWSLGCLLY-EMATFAPPFEARS-MQDLRYKVQR--GKYPPIP---PIYSQDLQNFIRSMLQVKPKLR  244 (256)
T ss_pred             CCCCCchhhHHHHHHHHH-HHHhCCCCCCCCC-HHHHHHHHhc--CCCCCCc---hhhCHHHHHHHHHHcCCCcccC
Confidence            63 455688887643333 2333444543222 1111222222  1222221   1335678888999998887765

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an

>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase

Probab=99.87  E-value=5.4e-22  Score=201.13  Aligned_cols=182  Identities=19%  Similarity=0.161  Sum_probs=131.7

Q ss_pred             eeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCcccccccccccC
Q psy9184         268 KIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTELLKCSCVR  341 (562)
Q Consensus       268 ~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~l~~~~iv~  341 (562)
                      .||+|+||.||+|      +.||+|++......     ..........|..+++.+.+.                     
T Consensus         1 ~ig~g~~g~Vy~~~~~~~~~~vaiK~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~---------------------   54 (278)
T cd05606           1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIK-----MKQGETLALNERIMLSLVSTG---------------------   54 (278)
T ss_pred             CcccCCCeEEEEEEEecCCCEEEEEEeeccccc-----cchhHHHHHHHHHHHHHHHhC---------------------
Confidence            4899999999998      68999998865311     011111233444444433220                     


Q ss_pred             CCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc---cCCHHHHHHHHHHHHHHHHHHHhhCCe
Q psy9184         342 GRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK---YRSPNQTYAMILQVVFSLAVAEVELEF  418 (562)
Q Consensus       342 g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~---~l~e~~i~~I~~QIl~aL~yLH~~~~I  418 (562)
                        .||+|+.+++.|..             .+.+|+||||+.||++...+.   .+++.+++.++.|++.||.|||+ .+|
T Consensus        55 --~~~~i~~~~~~~~~-------------~~~~~~v~e~~~g~~L~~~l~~~~~l~~~~~~~~~~ql~~~l~~lH~-~~i  118 (278)
T cd05606          55 --DCPFIVCMSYAFHT-------------PDKLSFILDLMNGGDLHYHLSQHGVFSEAEMRFYAAEIILGLEHMHN-RFV  118 (278)
T ss_pred             --CCCcEeeeeeeeec-------------CCEEEEEEecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHH-CCE
Confidence              03999999988875             558999999999997765553   38999999999999999999999 799


Q ss_pred             EeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecC---CcEEEeecCCCccccCCC--CCcHHH
Q psy9184         419 EHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVG---EKICYYDLSQDEELFEGE--GDYQFD  493 (562)
Q Consensus       419 iHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~---~g~v~~~l~~~pelF~g~--~~~q~d  493 (562)
                      +||||||+|||++.++                    .++|+|||+++....   ....++..|++||.+.+.  .+...|
T Consensus       119 ~H~di~p~nili~~~~--------------------~~kl~dfg~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~D  178 (278)
T cd05606         119 VYRDLKPANILLDEHG--------------------HVRISDLGLACDFSKKKPHASVGTHGYMAPEVLQKGVAYDSSAD  178 (278)
T ss_pred             EcCCCCHHHEEECCCC--------------------CEEEccCcCccccCccCCcCcCCCcCCcCcHHhcCCCCCCcccc
Confidence            9999999999998876                    799999999876543   223456778899988642  455588


Q ss_pred             HHHHhhcccCCCCCCCCCC
Q psy9184         494 MYRMMRKQCQNNWQNFTPK  512 (562)
Q Consensus       494 Iy~lm~~~~~~~W~~~~P~  512 (562)
                      ||++ |......+.+..|+
T Consensus       179 i~s~-G~~l~~l~~g~~p~  196 (278)
T cd05606         179 WFSL-GCMLFKLLRGHSPF  196 (278)
T ss_pred             hHhH-HHHHHHHHhCCCCC
Confidence            9875 33332333344444

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co

>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases

Probab=99.87  E-value=6.8e-22  Score=196.13  Aligned_cols=170  Identities=15%  Similarity=0.138  Sum_probs=130.6

Q ss_pred             eeeeccCceEEEEE-----e-----------eEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCc
Q psy9184         267 KKIGEGVYGEVFKL-----N-----------NSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPC  330 (562)
Q Consensus       267 ~~LG~GsfG~Vyka-----~-----------~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~  330 (562)
                      +.||+|+||.||+|     .           .+|+|++....         .....+.+|+.+++.++|           
T Consensus         1 ~~lg~G~~~~v~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~---------~~~~~~~~e~~~l~~l~h-----------   60 (259)
T cd05037           1 EHLGQGTFTNIYKGVLRVQSDLDIVGPGQEVSVVLKVLGSDH---------RDSLAFFETASLMSQLSH-----------   60 (259)
T ss_pred             CcccccccceEEEEEEeccCCccccCCccceeeeeeccccch---------hhHHHHHHHHHHHHcCCC-----------
Confidence            46999999999999     1           37777766432         114677899999999998           


Q ss_pred             ccccccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc----cCCHHHHHHHHHHHH
Q psy9184         331 FTELLKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK----YRSPNQTYAMILQVV  406 (562)
Q Consensus       331 fv~l~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~----~l~e~~i~~I~~QIl  406 (562)
                                     |||+++++.+..              ...++||||+.+|++.+.+.    .+++..+..++.||+
T Consensus        61 ---------------~~i~~~~~~~~~--------------~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~  111 (259)
T cd05037          61 ---------------KHLVKLYGVCVR--------------DENIMVEEYVKFGPLDVFLHREKNNVSLHWKLDVAKQLA  111 (259)
T ss_pred             ---------------cchhheeeEEec--------------CCcEEEEEcCCCCcHHHHHHhhccCCCHHHHHHHHHHHH
Confidence                           899998887642              35799999999997766553    378899999999999


Q ss_pred             HHHHHHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecCC-cEEEeecCCCccccC
Q psy9184         407 FSLAVAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVGE-KICYYDLSQDEELFE  485 (562)
Q Consensus       407 ~aL~yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~~-g~v~~~l~~~pelF~  485 (562)
                      .||.|||+ .+|+||||||+|||++..+..             ......++|+|||+++..... .......|.+||.+.
T Consensus       112 ~~l~~LH~-~~i~H~dlkp~Nill~~~~~~-------------~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~y~aPE~~~  177 (259)
T cd05037         112 SALHYLED-KKLVHGNVCGKNILVARYGLN-------------EGYVPFIKLSDPGIPITVLSREERVERIPWIAPECIR  177 (259)
T ss_pred             HHHHHHhh-CCeecccCccceEEEecCccc-------------cCCceeEEeCCCCcccccccccccccCCCccChhhhc
Confidence            99999999 799999999999999977521             001125999999999875541 223345688999887


Q ss_pred             CC---CCcHHHHHHHhh
Q psy9184         486 GE---GDYQFDMYRMMR  499 (562)
Q Consensus       486 g~---~~~q~dIy~lm~  499 (562)
                      +.   .....|||++.-
T Consensus       178 ~~~~~~~~~~Di~slG~  194 (259)
T cd05037         178 NGQASLTIAADKWSFGT  194 (259)
T ss_pred             CCCCCcchhhHHHHHHH
Confidence            75   455689988643

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki

>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins

Probab=99.87  E-value=1.6e-21  Score=193.67  Aligned_cols=228  Identities=19%  Similarity=0.222  Sum_probs=166.4

Q ss_pred             CCceeeeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCcccccc
Q psy9184         262 ALKNCKKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTELL  335 (562)
Q Consensus       262 ~y~~~~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~l~  335 (562)
                      +|++.+.||+|+||.||+|      +.||+|++....       .......+.+|+.+++.++|                
T Consensus         2 ~~~~~~~i~~g~~~~v~~~~~~~~~~~~~vk~~~~~~-------~~~~~~~~~~e~~~l~~l~~----------------   58 (264)
T cd06623           2 DLERVKVLGQGSSGVVYKVRHKPTGKIYALKKIHVDG-------DEEFRKQLLRELKTLRSCES----------------   58 (264)
T ss_pred             cceeeeeeeecCCeEEEEEEEcCCCcEEEEEEeccCc-------chHHHHHHHHHHHHHHhcCC----------------
Confidence            5788999999999999999      789999988653       11445678999999999998                


Q ss_pred             cccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc---cCCHHHHHHHHHHHHHHHHHH
Q psy9184         336 KCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK---YRSPNQTYAMILQVVFSLAVA  412 (562)
Q Consensus       336 ~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~---~l~e~~i~~I~~QIl~aL~yL  412 (562)
                                ||++++++.+..             ++.+|+||||++++++.+.+.   .+++..++.++.||+.||.||
T Consensus        59 ----------~~i~~~~~~~~~-------------~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~~l~~~l~~l  115 (264)
T cd06623          59 ----------PYVVKCYGAFYK-------------EGEISIVLEYMDGGSLADLLKKVGKIPEPVLAYIARQILKGLDYL  115 (264)
T ss_pred             ----------CCeeeEEEEEcc-------------CCeEEEEEEecCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHH
Confidence                      999999988875             468999999999998876664   489999999999999999999


Q ss_pred             HhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecCC-----cEEEeecCCCccccCCC
Q psy9184         413 EVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVGE-----KICYYDLSQDEELFEGE  487 (562)
Q Consensus       413 H~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~~-----g~v~~~l~~~pelF~g~  487 (562)
                      |+..+++||||+|+||+++.++                    .++|+|||++......     ....+..|.+||.+.+.
T Consensus       116 h~~~~~~H~~l~~~ni~~~~~~--------------------~~~l~df~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~  175 (264)
T cd06623         116 HTKRHIIHRDIKPSNLLINSKG--------------------EVKIADFGISKVLENTLDQCNTFVGTVTYMSPERIQGE  175 (264)
T ss_pred             hccCCCccCCCCHHHEEECCCC--------------------CEEEccCccceecccCCCcccceeecccccCHhhhCCC
Confidence            9823999999999999999886                    7999999999876541     23456678899987764


Q ss_pred             -CCcHHHHHHHhhcccCCCCCCCCCCChh---hhHHHHHHHHhhcccCCCCCCCchhHHHHHHHHHHHhcCCCcCcCC
Q psy9184         488 -GDYQFDMYRMMRKQCQNNWQNFTPKNNV---FWIHYLVDKATCLKKGYQYLRAPRHQAFELLEELGQNALHFDSCYE  561 (562)
Q Consensus       488 -~~~q~dIy~lm~~~~~~~W~~~~P~tn~---~wl~yl~~~Ll~~~~~~~~~~~~~~~~~~~l~~l~~~~l~~~s~~~  561 (562)
                       .+.+.|+|.+. ......+.+..|+...   .|...+.. +.. .........   ..-..+.+|...+|..+...|
T Consensus       176 ~~~~~~Dv~slG-~il~~l~tg~~p~~~~~~~~~~~~~~~-~~~-~~~~~~~~~---~~~~~l~~li~~~l~~~p~~R  247 (264)
T cd06623         176 SYSYAADIWSLG-LTLLECALGKFPFLPPGQPSFFELMQA-ICD-GPPPSLPAE---EFSPEFRDFISACLQKDPKKR  247 (264)
T ss_pred             CCCchhhHHHHH-HHHHHHHhCCCCCccccccCHHHHHHH-Hhc-CCCCCCCcc---cCCHHHHHHHHHHccCChhhC
Confidence             45568998863 3333444455555333   23332222 222 111111110   023467777777777766554

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of

>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase)

Probab=99.87  E-value=1.4e-21  Score=197.23  Aligned_cols=173  Identities=15%  Similarity=0.141  Sum_probs=136.3

Q ss_pred             CCCCceeeeeeccCceEEEEE----------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCC
Q psy9184         260 SSALKNCKKIGEGVYGEVFKL----------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTP  329 (562)
Q Consensus       260 ~~~y~~~~~LG~GsfG~Vyka----------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p  329 (562)
                      .++|++.+.||+|+||.||+|          ..||+|++....       .......+.+|+.+++.++|          
T Consensus         5 ~~~~~~~~~i~~g~~g~V~~~~~~~~~~~~~~~v~~k~~~~~~-------~~~~~~~~~~e~~~l~~l~h----------   67 (280)
T cd05043           5 RDRVTLSDLLQEGTFGRIFYGILIDEKPGKEEEVFVKTVKDHA-------SEIQVTLLLQESCLLYGLSH----------   67 (280)
T ss_pred             hhheEEeeeecccCCceEEEEEEecCCCCceeEEEEEEccCCC-------CHHHHHHHHHHHHHHHhCCC----------
Confidence            467899999999999999999          457888776432       34445778899999999988          


Q ss_pred             cccccccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc-----------cCCHHHH
Q psy9184         330 CFTELLKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK-----------YRSPNQT  398 (562)
Q Consensus       330 ~fv~l~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~-----------~l~e~~i  398 (562)
                                      |||+++++++..            .+...++++||+.+|++.+.+.           .+++..+
T Consensus        68 ----------------~ni~~~~~~~~~------------~~~~~~~~~~~~~~~~L~~~l~~~~~~~~~~~~~l~~~~~  119 (280)
T cd05043          68 ----------------QNILPILHVCIE------------DGEPPFVLYPYMNWGNLKLFLQQCRLGEANNPQALSTQQL  119 (280)
T ss_pred             ----------------CCCCeEEEEEec------------CCCCCEEEEEcCCCCcHHHHHHhccccccccccCCCHHHH
Confidence                            999998887543            1346899999999887765542           3778999


Q ss_pred             HHHHHHHHHHHHHHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecCCc-------
Q psy9184         399 YAMILQVVFSLAVAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVGEK-------  471 (562)
Q Consensus       399 ~~I~~QIl~aL~yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~~g-------  471 (562)
                      ..++.||+.||+|||+ .+++||||||+|||++.++                    .+||+|||+++......       
T Consensus       120 ~~i~~~i~~~l~~LH~-~~i~H~di~p~nil~~~~~--------------------~~kl~d~g~~~~~~~~~~~~~~~~  178 (280)
T cd05043         120 VHMAIQIACGMSYLHK-RGVIHKDIAARNCVIDEEL--------------------QVKITDNALSRDLFPMDYHCLGDN  178 (280)
T ss_pred             HHHHHHHHHHHHHHHH-CCEeecccCHhhEEEcCCC--------------------cEEECCCCCcccccCCceEEeCCC
Confidence            9999999999999999 7999999999999998875                    79999999998654311       


Q ss_pred             EEEeecCCCccccCCC-CCcHHHHHHHh
Q psy9184         472 ICYYDLSQDEELFEGE-GDYQFDMYRMM  498 (562)
Q Consensus       472 ~v~~~l~~~pelF~g~-~~~q~dIy~lm  498 (562)
                      ...+..|++||.+.+. .+...|||++.
T Consensus       179 ~~~~~~y~apE~~~~~~~~~~~Di~slG  206 (280)
T cd05043         179 ENRPVKWMALESLVNKEYSSASDVWSFG  206 (280)
T ss_pred             CCcchhccCHHHHhcCCCCchhhHHHhH
Confidence            1113347889987663 45568998753

Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It

>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases

Probab=99.87  E-value=1.4e-21  Score=193.04  Aligned_cols=221  Identities=20%  Similarity=0.212  Sum_probs=158.3

Q ss_pred             eeeeccCceEEEEE---------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCcccccccc
Q psy9184         267 KKIGEGVYGEVFKL---------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTELLKC  337 (562)
Q Consensus       267 ~~LG~GsfG~Vyka---------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~l~~~  337 (562)
                      +.||+|+||.||+|         ..||+|++.....       ......+.+|+.+++.++|                  
T Consensus         1 ~~ig~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~-------~~~~~~~~~e~~~l~~~~~------------------   55 (262)
T cd00192           1 KKLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDAS-------EEERKDFLKEARVMKKLGH------------------   55 (262)
T ss_pred             CccccCCceEEEEEEEecCCCCCceEEeEeeccccc-------hhHHHHHHHHHHHHhhcCC------------------
Confidence            47999999999999         3689999886531       1245788899999999998                  


Q ss_pred             cccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc------------cCCHHHHHHHHHHH
Q psy9184         338 SCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK------------YRSPNQTYAMILQV  405 (562)
Q Consensus       338 ~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~------------~l~e~~i~~I~~QI  405 (562)
                              +|++++++++..             ...++++|||+++|++.+.+.            .+++.+++.++.||
T Consensus        56 --------~~i~~~~~~~~~-------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l  114 (262)
T cd00192          56 --------PNVVRLLGVCTE-------------EEPLYLVLEYMEGGDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQI  114 (262)
T ss_pred             --------CChheeeeeecC-------------CCceEEEEEeccCCcHHHHHhhccccccccccccCCHHHHHHHHHHH
Confidence                    999999988875             558999999999998866553            36899999999999


Q ss_pred             HHHHHHHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecCC-------cEEEeecC
Q psy9184         406 VFSLAVAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVGE-------KICYYDLS  478 (562)
Q Consensus       406 l~aL~yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~~-------g~v~~~l~  478 (562)
                      +.||+|||+ .+|+||||||+||+++.++                    .++|+|||+++.....       ....+..|
T Consensus       115 ~~al~~lH~-~~i~H~di~p~nili~~~~--------------------~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y  173 (262)
T cd00192         115 AKGMEYLAS-KKFVHRDLAARNCLVGEDL--------------------VVKISDFGLSRDVYDDDYYRKKTGGKLPIRW  173 (262)
T ss_pred             HHHHHHHHc-CCcccCccCcceEEECCCC--------------------cEEEcccccccccccccccccccCCCcCccc
Confidence            999999999 7999999999999999986                    7999999999877642       22335568


Q ss_pred             CCccccCC-CCCcHHHHHHHhhcccCCCCC-CCCCCChhhhHHHHHHHHhhcccCCCCCCCchhHHHHHHHHHHHhcCCC
Q psy9184         479 QDEELFEG-EGDYQFDMYRMMRKQCQNNWQ-NFTPKNNVFWIHYLVDKATCLKKGYQYLRAPRHQAFELLEELGQNALHF  556 (562)
Q Consensus       479 ~~pelF~g-~~~~q~dIy~lm~~~~~~~W~-~~~P~tn~~wl~yl~~~Ll~~~~~~~~~~~~~~~~~~~l~~l~~~~l~~  556 (562)
                      ++||.+.+ ......|||++.-... ..|. +..|+....+ .-+.+.+.. ......+.    ..-..+.++...+|..
T Consensus       174 ~aPE~~~~~~~~~~~Di~slG~il~-~l~~~g~~p~~~~~~-~~~~~~~~~-~~~~~~~~----~~~~~~~~li~~~l~~  246 (262)
T cd00192         174 MAPESLKDGIFTSKSDVWSFGVLLW-EIFTLGATPYPGLSN-EEVLEYLRK-GYRLPKPE----YCPDELYELMLSCWQL  246 (262)
T ss_pred             cCHHHhccCCcchhhccHHHHHHHH-HHHhcCCCCCCCCCH-HHHHHHHHc-CCCCCCCc----cCChHHHHHHHHHccC
Confidence            89998876 3455688888643332 2333 2444433321 122233332 11111111    1134566777778877


Q ss_pred             cCcCC
Q psy9184         557 DSCYE  561 (562)
Q Consensus       557 ~s~~~  561 (562)
                      +..+|
T Consensus       247 ~p~~R  251 (262)
T cd00192         247 DPEDR  251 (262)
T ss_pred             CcccC
Confidence            66554

Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan

>KOG0984|consensus

Probab=99.87  E-value=1.3e-22  Score=194.01  Aligned_cols=177  Identities=21%  Similarity=0.273  Sum_probs=141.5

Q ss_pred             CCCCCceeeeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCccc
Q psy9184         259 PSSALKNCKKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFT  332 (562)
Q Consensus       259 ~~~~y~~~~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv  332 (562)
                      +.++...+..||+|+||.|-+.      ...|+|.++..-       +.+...+.++|+.+..+...             
T Consensus        44 ~ad~L~~i~elGrGayG~vekmrh~~sg~imAvKri~~tv-------n~q~q~r~L~dldi~~r~~~-------------  103 (282)
T KOG0984|consen   44 PADDLVGIEELGRGAYGVVEKMRHIQSGTIMAVKRIRATV-------NSQEQKRLLMDLDIIMRTVD-------------  103 (282)
T ss_pred             chhhhhhhhhhcCCccchhhheeeccCCeEEEEeeehhhc-------ChHHHHHHHHhhhhhccCCC-------------
Confidence            4566778899999999988766      899999998753       23444678899998877766             


Q ss_pred             ccccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc--------cCCHHHHHHHHHH
Q psy9184         333 ELLKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK--------YRSPNQTYAMILQ  404 (562)
Q Consensus       333 ~l~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~--------~l~e~~i~~I~~Q  404 (562)
                                  +|++|.+|+.+..             +..+||+||.|.  +.++.+.        .++|..+-.|+..
T Consensus       104 ------------CPf~V~FyGa~~r-------------egdvwIcME~M~--tSldkfy~~v~~~g~~ipE~vlGkIa~S  156 (282)
T KOG0984|consen  104 ------------CPFTVHFYGALFR-------------EGDVWICMELMD--TSLDKFYRKVLKKGGTIPEDVLGKIAVS  156 (282)
T ss_pred             ------------CCeEEEeehhhhc-------------cccEEEeHHHhh--hhHHHHHHHHHhcCCcCchHHhhHhHHH
Confidence                        5999999987754             679999999995  5566553        3889999999999


Q ss_pred             HHHHHHHHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecCC----cEEEeecCCC
Q psy9184         405 VVFSLAVAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVGE----KICYYDLSQD  480 (562)
Q Consensus       405 Il~aL~yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~~----g~v~~~l~~~  480 (562)
                      ++.||.|||++..+||||+||+||||+..|                    +|||||||.|..+.+.    -..+..-|++
T Consensus       157 vv~al~~L~~kL~vIHRDvKPsNiLIn~~G--------------------qVKiCDFGIsG~L~dSiAkt~daGCkpYma  216 (282)
T KOG0984|consen  157 VVHALEFLHSKLSVIHRDVKPSNILINYDG--------------------QVKICDFGISGYLVDSIAKTMDAGCKPYMA  216 (282)
T ss_pred             HHHHHHHHHHHhhhhhccCCcceEEEccCC--------------------cEEEcccccceeehhhhHHHHhcCCCccCC
Confidence            999999999999999999999999999998                    8999999999887651    0122346788


Q ss_pred             ccccCCC-----CCcHHHHHHHhhccc
Q psy9184         481 EELFEGE-----GDYQFDMYRMMRKQC  502 (562)
Q Consensus       481 pelF~g~-----~~~q~dIy~lm~~~~  502 (562)
                      ||.....     ++..+|||++.-+..
T Consensus       217 PEri~~e~n~~gY~vksDvWSLGItmi  243 (282)
T KOG0984|consen  217 PERINPELNQKGYSVKSDVWSLGITMI  243 (282)
T ss_pred             hhhcCcccCcccceeehhhhhhhhhhh
Confidence            8877653     445599998755444

>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins

Probab=99.87  E-value=9.7e-22  Score=194.80  Aligned_cols=178  Identities=19%  Similarity=0.282  Sum_probs=138.5

Q ss_pred             eeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCcccccccccccCC
Q psy9184         269 IGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTELLKCSCVRG  342 (562)
Q Consensus       269 LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~l~~~~iv~g  342 (562)
                      ||.|+||.||+|      +.+|+|++....     .........+.+|+.+++.++|                       
T Consensus         1 lg~g~~~~vy~~~~~~~~~~~~~k~~~~~~-----~~~~~~~~~~~~e~~~l~~~~h-----------------------   52 (265)
T cd05579           1 ISKGAYGRVFLAKKKSTGDIYAIKVIKKAD-----MIRKNQVDQVLTERDILSQAQS-----------------------   52 (265)
T ss_pred             CCCCCceEEEEEEECCCCCEEEEEEecchh-----hhhhhHHHHHHHHHHHHHhCCC-----------------------
Confidence            689999999999      789999997653     2223556788999999999998                       


Q ss_pred             CCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc---cCCHHHHHHHHHHHHHHHHHHHhhCCeE
Q psy9184         343 RYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK---YRSPNQTYAMILQVVFSLAVAEVELEFE  419 (562)
Q Consensus       343 ~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~---~l~e~~i~~I~~QIl~aL~yLH~~~~Ii  419 (562)
                         |||+++++.+..             +...|++|||+.+|++.+.+.   .+++..+..++.||+.||.|||+ .+++
T Consensus        53 ---~~i~~~~~~~~~-------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~L~~lH~-~~i~  115 (265)
T cd05579          53 ---PYVVKLYYSFQG-------------KKNLYLVMEYLPGGDLASLLENVGSLDEDVARIYIAEIVLALEYLHS-NGII  115 (265)
T ss_pred             ---cchhHHHHheec-------------CcEEEEEEecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHH-cCee
Confidence               999999988864             558999999999887755443   48999999999999999999999 7999


Q ss_pred             eccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecCC-------------cEEEeecCCCccccCC
Q psy9184         420 HRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVGE-------------KICYYDLSQDEELFEG  486 (562)
Q Consensus       420 HRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~~-------------g~v~~~l~~~pelF~g  486 (562)
                      ||||+|+||+++.++                    .++|+|||++......             .......|.+||.+.+
T Consensus       116 H~di~~~nil~~~~~--------------------~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~  175 (265)
T cd05579         116 HRDLKPDNILIDSNG--------------------HLKLTDFGLSKVGLVRRQINLNDDEKEDKRIVGTPDYIAPEVILG  175 (265)
T ss_pred             cCCCCHHHeEEcCCC--------------------CEEEEecccchhcccCcccccccccccccCcccCccccCHHHhcC
Confidence            999999999999886                    7999999998765432             1234556788887665


Q ss_pred             C-CCcHHHHHHHhhcccCCCCCCCCCC
Q psy9184         487 E-GDYQFDMYRMMRKQCQNNWQNFTPK  512 (562)
Q Consensus       487 ~-~~~q~dIy~lm~~~~~~~W~~~~P~  512 (562)
                      . .....|+|++. ......+.+..|+
T Consensus       176 ~~~~~~~Dv~slG-~~~~~l~~g~~p~  201 (265)
T cd05579         176 QGHSKTVDWWSLG-CILYEFLVGIPPF  201 (265)
T ss_pred             CCCCcchhhHHHH-HHHHHHHhCCCCC
Confidence            3 44568888753 2222233344444

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re

>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases

Probab=99.87  E-value=1.4e-21  Score=200.22  Aligned_cols=177  Identities=21%  Similarity=0.289  Sum_probs=137.6

Q ss_pred             CCceeeeeeccCceEEEEE--------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCcccc
Q psy9184         262 ALKNCKKIGEGVYGEVFKL--------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTE  333 (562)
Q Consensus       262 ~y~~~~~LG~GsfG~Vyka--------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~  333 (562)
                      +|.+.++||+|+||.||+|        ..||+|++.....     ........+.+|+.+++.++|              
T Consensus         1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~alK~~~~~~~-----~~~~~~~~~~~e~~~l~~l~h--------------   61 (316)
T cd07842           1 KYEIEGCIGRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKE-----QYTGISQSACREIALLRELKH--------------   61 (316)
T ss_pred             CceEEEEeccCCcEEEEEEEecCCCCCCeEEEEEeccccc-----cccCccHHHHHHHHHHHhcCC--------------
Confidence            4788999999999999999        3699999986421     112223567889999999998              


Q ss_pred             cccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc--------cCCHHHHHHHHHHH
Q psy9184         334 LLKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK--------YRSPNQTYAMILQV  405 (562)
Q Consensus       334 l~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~--------~l~e~~i~~I~~QI  405 (562)
                                  |||+++++.+.+..           ...+|+||||+.+ ++++.+.        .+++..++.++.||
T Consensus        62 ------------~~i~~~~~~~~~~~-----------~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~qi  117 (316)
T cd07842          62 ------------ENVVSLVEVFLEHA-----------DKSVYLLFDYAEH-DLWQIIKFHRQAKRVSIPPSMVKSLLWQI  117 (316)
T ss_pred             ------------CCccceEEEEeCCC-----------CceEEEEEeCCCc-CHHHHHHhhccCCCcCcCHHHHHHHHHHH
Confidence                        99999999887521           3589999999974 4544331        47889999999999


Q ss_pred             HHHHHHHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecC--------CcEEEeec
Q psy9184         406 VFSLAVAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVG--------EKICYYDL  477 (562)
Q Consensus       406 l~aL~yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~--------~g~v~~~l  477 (562)
                      +.||+|||+ .+|+||||||+|||++.++...                ..+||+|||+++....        .++..+..
T Consensus       118 ~~~l~~lH~-~~i~h~dlkp~Nil~~~~~~~~----------------~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~  180 (316)
T cd07842         118 LNGVHYLHS-NWVLHRDLKPANILVMGEGPER----------------GVVKIGDLGLARLFNAPLKPLADLDPVVVTIW  180 (316)
T ss_pred             HHHHHHHHh-CCEeeCCCCHHHEEEcCCCCcc----------------ceEEECCCccccccCCCcccccccCCcccccc
Confidence            999999999 7999999999999999832110                1799999999986542        24455667


Q ss_pred             CCCccccCCC--CCcHHHHHHHh
Q psy9184         478 SQDEELFEGE--GDYQFDMYRMM  498 (562)
Q Consensus       478 ~~~pelF~g~--~~~q~dIy~lm  498 (562)
                      |++||.+.+.  .+.+.|+|++.
T Consensus       181 y~aPE~~~~~~~~~~~~Dv~slG  203 (316)
T cd07842         181 YRAPELLLGARHYTKAIDIWAIG  203 (316)
T ss_pred             ccCHHHHhCCCCCCcHHHHHHHH
Confidence            8999988764  35568998853

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the

>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases

Probab=99.87  E-value=1.9e-21  Score=195.39  Aligned_cols=170  Identities=22%  Similarity=0.326  Sum_probs=138.3

Q ss_pred             CceeeeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCccccccc
Q psy9184         263 LKNCKKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTELLK  336 (562)
Q Consensus       263 y~~~~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~l~~  336 (562)
                      |+..+.||.|++|.||+|      +.+|+|.+.....      .......+.+|+.+++.++|                 
T Consensus         1 y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~------~~~~~~~~~~e~~~l~~l~~-----------------   57 (283)
T cd05118           1 YQKLGKIGEGTYGVVYKARDKLTGEIVAIKKIKLRFE------SEGIPKTALREIKLLKELNH-----------------   57 (283)
T ss_pred             CccceeeecCCCceEEEEEcCCCCcEEEEEEeccccc------cchhHHHHHHHHHHHHHhcC-----------------
Confidence            567789999999999999      7899999876531      12334577889999999998                 


Q ss_pred             ccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc----cCCHHHHHHHHHHHHHHHHHH
Q psy9184         337 CSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK----YRSPNQTYAMILQVVFSLAVA  412 (562)
Q Consensus       337 ~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~----~l~e~~i~~I~~QIl~aL~yL  412 (562)
                               |+|+++++.+..             ++.+|++|||+.+ ++.+.+.    .+++..+..++.||+.||.||
T Consensus        58 ---------~~i~~~~~~~~~-------------~~~~~~v~e~~~~-~l~~~l~~~~~~~~~~~~~~~~~~i~~~l~~L  114 (283)
T cd05118          58 ---------PNIIKLLDVFRH-------------KGDLYLVFEFMDT-DLYKLIKDRQRGLPESLIKSYLYQLLQGLAFC  114 (283)
T ss_pred             ---------CCcchHHHhhcc-------------CCCEEEEEeccCC-CHHHHHHhhcccCCHHHHHHHHHHHHHHHHHH
Confidence                     999999999875             4689999999974 5555442    478999999999999999999


Q ss_pred             HhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecCCc-----EEEeecCCCccccCCC
Q psy9184         413 EVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVGEK-----ICYYDLSQDEELFEGE  487 (562)
Q Consensus       413 H~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~~g-----~v~~~l~~~pelF~g~  487 (562)
                      |+ .+|+|+||||+||+++.++                    .++|+|||.+.......     ......|.+||.+.+.
T Consensus       115 H~-~~i~H~dl~p~nili~~~~--------------------~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~  173 (283)
T cd05118         115 HS-HGILHRDLKPENLLINTEG--------------------VLKLADFGLARSFGSPVRPYTHYVVTRWYRAPELLLGD  173 (283)
T ss_pred             HH-CCeeecCcCHHHEEECCCC--------------------cEEEeeeeeeEecCCCcccccCccCcccccCcHHHhcC
Confidence            99 7999999999999999876                    79999999998776532     3345568899988764


Q ss_pred             --CCcHHHHHHHhh
Q psy9184         488 --GDYQFDMYRMMR  499 (562)
Q Consensus       488 --~~~q~dIy~lm~  499 (562)
                        .+.+.|+|++.-
T Consensus       174 ~~~~~~~Di~slG~  187 (283)
T cd05118         174 KGYSTPVDIWSVGC  187 (283)
T ss_pred             CCCCchhHHHHHHH
Confidence              455689988643

Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They

>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12

Probab=99.87  E-value=1.3e-21  Score=199.40  Aligned_cols=195  Identities=19%  Similarity=0.268  Sum_probs=144.2

Q ss_pred             CCCceeeeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCccccc
Q psy9184         261 SALKNCKKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTEL  334 (562)
Q Consensus       261 ~~y~~~~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~l  334 (562)
                      ++|++.+.||+|+||.||+|      +.||+|++.....      .......+.+|+.+++.++|               
T Consensus         7 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~------~~~~~~~~~~e~~~~~~l~h---------------   65 (302)
T cd07864           7 DKFDIIGQIGEGTYGQVYKARDKDTGELVALKKVRLDNE------KEGFPITAIREIKILRQLNH---------------   65 (302)
T ss_pred             hhhheeeeecccCCEEEEEEEECCCCcEEEEEEEeeccc------ccCchHHHHHHHHHHHhCCC---------------
Confidence            57899999999999999999      6899999986431      11222456789999999998               


Q ss_pred             ccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc----cCCHHHHHHHHHHHHHHHH
Q psy9184         335 LKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK----YRSPNQTYAMILQVVFSLA  410 (562)
Q Consensus       335 ~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~----~l~e~~i~~I~~QIl~aL~  410 (562)
                                 ||++++++++.+....   .........+|+||||+++ .++..+.    .+++.++..++.||+.||+
T Consensus        66 -----------~~i~~~~~~~~~~~~~---~~~~~~~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~i~~qi~~aL~  130 (302)
T cd07864          66 -----------RNIVNLKEIVTDKQDA---LDFKKDKGAFYLVFEYMDH-DLMGLLESGLVHFSEDHIKSFMKQLLEGLN  130 (302)
T ss_pred             -----------CCeeeeeheecCcchh---hhccccCCcEEEEEcccCc-cHHHHHhcCCCCCCHHHHHHHHHHHHHHHH
Confidence                       9999998887652100   0011123479999999985 4444332    4889999999999999999


Q ss_pred             HHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecCCc------EEEeecCCCcccc
Q psy9184         411 VAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVGEK------ICYYDLSQDEELF  484 (562)
Q Consensus       411 yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~~g------~v~~~l~~~pelF  484 (562)
                      |||+ .||+||||||+||+++.++                    .+||+|||+++......      ......|++||.+
T Consensus       131 ~LH~-~~i~H~dl~p~nili~~~~--------------------~~kl~dfg~~~~~~~~~~~~~~~~~~~~~y~~PE~~  189 (302)
T cd07864         131 YCHK-KNFLHRDIKCSNILLNNKG--------------------QIKLADFGLARLYNSEESRPYTNKVITLWYRPPELL  189 (302)
T ss_pred             HHHh-CCeecCCCCHHHEEECCCC--------------------cEEeCcccccccccCCcccccccceeccCccChHHh
Confidence            9999 7999999999999999876                    79999999998764322      2345568899988


Q ss_pred             CCC--CCcHHHHHHHhhcccCCCCCCCCCCC
Q psy9184         485 EGE--GDYQFDMYRMMRKQCQNNWQNFTPKN  513 (562)
Q Consensus       485 ~g~--~~~q~dIy~lm~~~~~~~W~~~~P~t  513 (562)
                      .+.  .....|||++ |......+.+..|+.
T Consensus       190 ~~~~~~~~~~Di~sl-G~~~~el~~g~~~~~  219 (302)
T cd07864         190 LGEERYGPAIDVWSC-GCILGELFTKKPIFQ  219 (302)
T ss_pred             cCCCCCCchhHHHHH-HHHHHHHHhCCCCCC
Confidence            653  3556899875 333333444554553

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely

>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase

Probab=99.87  E-value=1.6e-21  Score=193.87  Aligned_cols=221  Identities=15%  Similarity=0.141  Sum_probs=156.0

Q ss_pred             eeeeccCceEEEEE---------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCcccccccc
Q psy9184         267 KKIGEGVYGEVFKL---------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTELLKC  337 (562)
Q Consensus       267 ~~LG~GsfG~Vyka---------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~l~~~  337 (562)
                      ++||+|+||.||+|         ..||+|.+.....       ....+.+.+|+.+++.++|                  
T Consensus         1 ~~ig~g~~~~v~~~~~~~~~~~~~~vaiK~~~~~~~-------~~~~~~~~~e~~~l~~l~h------------------   55 (257)
T cd05040           1 KKLGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKL-------SDIMDDFLKEAAIMHSLDH------------------   55 (257)
T ss_pred             CcCCccCcccEEeeeEecCCCCceEEEEeecCCccc-------HHHHHHHHHHHHHHhhcCC------------------
Confidence            46899999999999         2589999986541       1455788999999999998                  


Q ss_pred             cccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc-----cCCHHHHHHHHHHHHHHHHHH
Q psy9184         338 SCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK-----YRSPNQTYAMILQVVFSLAVA  412 (562)
Q Consensus       338 ~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~-----~l~e~~i~~I~~QIl~aL~yL  412 (562)
                              |||+++++.+..              ...++||||+++|++.+.+.     .+++..++.++.|++.||.||
T Consensus        56 --------~~iv~~~~~~~~--------------~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~L~~l  113 (257)
T cd05040          56 --------ENLIRLYGVVLT--------------HPLMMVTELAPLGSLLDRLRKDALGHFLISTLCDYAVQIANGMRYL  113 (257)
T ss_pred             --------CCccceeEEEcC--------------CeEEEEEEecCCCcHHHHHHhcccccCcHHHHHHHHHHHHHHHHHH
Confidence                    999998887752              47899999999998876653     378899999999999999999


Q ss_pred             HhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecCCc--------EEEeecCCCcccc
Q psy9184         413 EVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVGEK--------ICYYDLSQDEELF  484 (562)
Q Consensus       413 H~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~~g--------~v~~~l~~~pelF  484 (562)
                      |+ .+++||||||+||+++.++                    .+||+|||+++......        ......|.+||.+
T Consensus       114 H~-~~i~H~di~p~nil~~~~~--------------------~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~~pE~~  172 (257)
T cd05040         114 ES-KRFIHRDLAARNILLASDD--------------------KVKIGDFGLMRALPQNEDHYVMEEHLKVPFAWCAPESL  172 (257)
T ss_pred             Hh-CCccccccCcccEEEecCC--------------------EEEeccccccccccccccceecccCCCCCceecCHHHh
Confidence            99 6999999999999999886                    79999999998765421        1123457888877


Q ss_pred             CC-CCCcHHHHHHHhhcccCCCCC-CCCCCChhhhHHHHHHHHhhcccCCCCCCCchhHHHHHHHHHHHhcCCCcCcCC
Q psy9184         485 EG-EGDYQFDMYRMMRKQCQNNWQ-NFTPKNNVFWIHYLVDKATCLKKGYQYLRAPRHQAFELLEELGQNALHFDSCYE  561 (562)
Q Consensus       485 ~g-~~~~q~dIy~lm~~~~~~~W~-~~~P~tn~~wl~yl~~~Ll~~~~~~~~~~~~~~~~~~~l~~l~~~~l~~~s~~~  561 (562)
                      .+ ..+.+.|||++. ......|. +..|+....-. .+..........+..+.    ..-..+.++...++..+.++|
T Consensus       173 ~~~~~~~~~Di~slG-~~l~el~t~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~----~~~~~~~~li~~~l~~~p~~R  245 (257)
T cd05040         173 RTRTFSHASDVWMFG-VTLWEMFTYGEEPWAGLSGS-QILKKIDKEGERLERPE----ACPQDIYNVMLQCWAHNPADR  245 (257)
T ss_pred             cccCcCchhhhHHHH-HHHHHHHhCCCCCCCCCCHH-HHHHHHHhcCCcCCCCc----cCCHHHHHHHHHHCCCCcccC
Confidence            65 455568998864 33334443 55555322111 11111121011111111    112456667778887777665

Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and

>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases

Probab=99.87  E-value=1.9e-21  Score=192.55  Aligned_cols=165  Identities=22%  Similarity=0.242  Sum_probs=133.6

Q ss_pred             eeeeccCceEEEEE-----eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCcccccccccccC
Q psy9184         267 KKIGEGVYGEVFKL-----NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTELLKCSCVR  341 (562)
Q Consensus       267 ~~LG~GsfG~Vyka-----~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~l~~~~iv~  341 (562)
                      ++||+|+||.||+|     +.||+|.+....       .......+.+|+.+++.++|                      
T Consensus         1 ~~lg~g~~g~v~~~~~~~~~~v~~K~~~~~~-------~~~~~~~~~~e~~~l~~l~~----------------------   51 (251)
T cd05041           1 EKIGKGNFGDVYKGVLKGNTEVAVKTCRSTL-------PPDLKRKFLQEAEILKQYDH----------------------   51 (251)
T ss_pred             CccccCCCceEEEEEEeCCCcEEEEeccccC-------CHHHHHHHHHHHHHHHhCCC----------------------
Confidence            47999999999999     679999887653       12344678899999999998                      


Q ss_pred             CCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc----cCCHHHHHHHHHHHHHHHHHHHhhCC
Q psy9184         342 GRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK----YRSPNQTYAMILQVVFSLAVAEVELE  417 (562)
Q Consensus       342 g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~----~l~e~~i~~I~~QIl~aL~yLH~~~~  417 (562)
                          |||+++++.+..             ....|+||||+.|+++.+.+.    .+++..+..++.|++.||.|||+ .+
T Consensus        52 ----~~i~~~~~~~~~-------------~~~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~l~~lH~-~~  113 (251)
T cd05041          52 ----PNIVKLIGVCVQ-------------KQPIYIVMELVPGGSLLTFLRKKKNRLTVKKLLQMSLDAAAGMEYLES-KN  113 (251)
T ss_pred             ----CCeEEEEEEEec-------------CCCeEEEEEcCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHh-CC
Confidence                999999988765             457899999999998876653    37888999999999999999999 79


Q ss_pred             eEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecCCc-------EEEeecCCCccccCC-CCC
Q psy9184         418 FEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVGEK-------ICYYDLSQDEELFEG-EGD  489 (562)
Q Consensus       418 IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~~g-------~v~~~l~~~pelF~g-~~~  489 (562)
                      |+||||||+|||++.++                    .++|+|||+++......       ......|.+||.+.+ ...
T Consensus       114 i~h~di~p~nili~~~~--------------------~~~l~d~g~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~  173 (251)
T cd05041         114 CIHRDLAARNCLVGENN--------------------VLKISDFGMSREEEGGIYTVSDGLKQIPIKWTAPEALNYGRYT  173 (251)
T ss_pred             EehhhcCcceEEEcCCC--------------------cEEEeeccccccccCCcceeccccCcceeccCChHhhccCCCC
Confidence            99999999999998876                    79999999998654211       111344788998765 455


Q ss_pred             cHHHHHHHh
Q psy9184         490 YQFDMYRMM  498 (562)
Q Consensus       490 ~q~dIy~lm  498 (562)
                      ...|+|++.
T Consensus       174 ~~~Di~slG  182 (251)
T cd05041         174 SESDVWSYG  182 (251)
T ss_pred             cchhHHHHH
Confidence            668998864

Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k

>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases

Probab=99.87  E-value=2.6e-21  Score=190.85  Aligned_cols=227  Identities=19%  Similarity=0.204  Sum_probs=161.9

Q ss_pred             CCceeeeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCcccccc
Q psy9184         262 ALKNCKKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTELL  335 (562)
Q Consensus       262 ~y~~~~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~l~  335 (562)
                      +|++.+.||+|+||.||++      +.||+|.+....      ........+.+|+.+++++.|                
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~------~~~~~~~~~~~e~~~l~~l~~----------------   58 (254)
T cd06627           1 NYQLGDLIGRGAFGVVYKGLNLETGDFVAIKQISLEK------IKEEALKSIMQEIDLLKNLKH----------------   58 (254)
T ss_pred             CceeeeEEcccCCeEEEEEEEcCCCcEEEEEEecccc------cCHHHHHHHHHHHHHHHhCCC----------------
Confidence            4788999999999999999      689999998653      123455788999999999988                


Q ss_pred             cccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc---cCCHHHHHHHHHHHHHHHHHH
Q psy9184         336 KCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK---YRSPNQTYAMILQVVFSLAVA  412 (562)
Q Consensus       336 ~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~---~l~e~~i~~I~~QIl~aL~yL  412 (562)
                                |+++++++++.+             ++..|++||++.++++.+.+.   .+++..+..++.|++.||.||
T Consensus        59 ----------~~i~~~~~~~~~-------------~~~~~~v~e~~~~~~L~~~~~~~~~l~~~~~~~~~~~i~~~l~~l  115 (254)
T cd06627          59 ----------PNIVKYIGSIET-------------SDSLYIILEYAENGSLRQIIKKFGPFPESLVAVYVYQVLQGLAYL  115 (254)
T ss_pred             ----------CCccEEEEEEEe-------------CCEEEEEEecCCCCcHHHHHHhccCCCHHHHHHHHHHHHHHHHHH
Confidence                      899999888764             458999999999887766553   489999999999999999999


Q ss_pred             HhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecCCc-----EEEeecCCCccccCCC
Q psy9184         413 EVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVGEK-----ICYYDLSQDEELFEGE  487 (562)
Q Consensus       413 H~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~~g-----~v~~~l~~~pelF~g~  487 (562)
                      |+ .||+||||||+||+++.++                    .++|+|||+++......     ...+..|.+||...+.
T Consensus       116 H~-~~i~H~dl~p~ni~i~~~~--------------------~~~l~d~~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~  174 (254)
T cd06627         116 HE-QGVIHRDIKAANILTTKDG--------------------VVKLADFGVATKLNDVSKDDASVVGTPYWMAPEVIEMS  174 (254)
T ss_pred             hh-CCcccCCCCHHHEEECCCC--------------------CEEEeccccceecCCCcccccccccchhhcCHhhhcCC
Confidence            99 7999999999999999875                    79999999998776422     2345567888877654


Q ss_pred             -CCcHHHHHHHhhcccCCCCCCCCCCChhhhHHHHHHHHhhcccCCCCCCCchhHHHHHHHHHHHhcCCCcCcCC
Q psy9184         488 -GDYQFDMYRMMRKQCQNNWQNFTPKNNVFWIHYLVDKATCLKKGYQYLRAPRHQAFELLEELGQNALHFDSCYE  561 (562)
Q Consensus       488 -~~~q~dIy~lm~~~~~~~W~~~~P~tn~~wl~yl~~~Ll~~~~~~~~~~~~~~~~~~~l~~l~~~~l~~~s~~~  561 (562)
                       .+.+.|+|.+..... ..+.+..|+.+......... +..  ........   .....+..|...+|+.+...|
T Consensus       175 ~~~~~~Dv~~lG~~l~-~l~~g~~p~~~~~~~~~~~~-~~~--~~~~~~~~---~~~~~~~~~i~~~l~~~p~~R  242 (254)
T cd06627         175 GASTASDIWSLGCTVI-ELLTGNPPYYDLNPMAALFR-IVQ--DDHPPLPE---GISPELKDFLMQCFQKDPNLR  242 (254)
T ss_pred             CCCcchhHHHHHHHHH-HHHhCCCCCCCccHHHHHHH-Hhc--cCCCCCCC---CCCHHHHHHHHHHHhCChhhC
Confidence             344588887543322 33344444432221111111 111  11111111   123466677777776665443

Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast

>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants

Probab=99.87  E-value=7.1e-22  Score=206.14  Aligned_cols=177  Identities=19%  Similarity=0.253  Sum_probs=138.0

Q ss_pred             CCCCceeeeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCcccc
Q psy9184         260 SSALKNCKKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTE  333 (562)
Q Consensus       260 ~~~y~~~~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~  333 (562)
                      ..+|.+.+.||+|+||.||+|      ..||||.+.....      .......+.+|+.+++.++|              
T Consensus         4 ~~~y~~~~~lg~G~~~~vy~~~~~~~~~~vaiK~~~~~~~------~~~~~~~~~~E~~~l~~l~h--------------   63 (337)
T cd07858           4 DTKYVPIKPIGRGAYGIVCSAKNSETNEKVAIKKIANAFD------NRIDAKRTLREIKLLRHLDH--------------   63 (337)
T ss_pred             ccceeEEEEeccCCCeEEEEEEecCCCCeEEEEEeccccc------ccchhHHHHHHHHHHHhcCC--------------
Confidence            357899999999999999999      7899999875421      12223466789999999998              


Q ss_pred             cccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCcccc---ccCCHHHHHHHHHHHHHHHH
Q psy9184         334 LLKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDI---KYRSPNQTYAMILQVVFSLA  410 (562)
Q Consensus       334 l~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l---~~l~e~~i~~I~~QIl~aL~  410 (562)
                                  |||+++++++....        ......+|+||||+. +.+.+.+   ..+++..+..++.||+.||.
T Consensus        64 ------------~ni~~~~~~~~~~~--------~~~~~~~~lv~e~~~-~~L~~~~~~~~~l~~~~~~~i~~qi~~aL~  122 (337)
T cd07858          64 ------------ENVIAIKDIMPPPH--------REAFNDVYIVYELMD-TDLHQIIRSSQTLSDDHCQYFLYQLLRGLK  122 (337)
T ss_pred             ------------CCccchHHheeccc--------ccccCcEEEEEeCCC-CCHHHHHhcCCCCCHHHHHHHHHHHHHHHH
Confidence                        99999998876421        011235899999996 4455444   24889999999999999999


Q ss_pred             HHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecCC-----cEEEeecCCCccccC
Q psy9184         411 VAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVGE-----KICYYDLSQDEELFE  485 (562)
Q Consensus       411 yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~~-----g~v~~~l~~~pelF~  485 (562)
                      |||+ .+|+||||||+|||++.++                    .++|+|||+++.....     ....+..|++||.+.
T Consensus       123 ~LH~-~~i~H~dlkp~Nil~~~~~--------------------~~kL~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~  181 (337)
T cd07858         123 YIHS-ANVLHRDLKPSNLLLNANC--------------------DLKICDFGLARTTSEKGDFMTEYVVTRWYRAPELLL  181 (337)
T ss_pred             HHHh-CCEecCCCCHHHEEEcCCC--------------------CEEECcCccccccCCCcccccccccccCccChHHHh
Confidence            9999 7999999999999998876                    7999999999876432     223456788999775


Q ss_pred             C--CCCcHHHHHHHh
Q psy9184         486 G--EGDYQFDMYRMM  498 (562)
Q Consensus       486 g--~~~~q~dIy~lm  498 (562)
                      +  ....+.|||++.
T Consensus       182 ~~~~~~~~~DiwslG  196 (337)
T cd07858         182 NCSEYTTAIDVWSVG  196 (337)
T ss_pred             cCCCCCCcccHHHHH
Confidence            4  345568988863

Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati

>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases

Probab=99.87  E-value=2e-21  Score=195.48  Aligned_cols=184  Identities=20%  Similarity=0.256  Sum_probs=142.4

Q ss_pred             CceeeeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCccccccc
Q psy9184         263 LKNCKKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTELLK  336 (562)
Q Consensus       263 y~~~~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~l~~  336 (562)
                      |++.++||.|+||.||+|      +.+|+|++....      ........+.+|+.+++.++|                 
T Consensus         1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~~K~~~~~~------~~~~~~~~~~~e~~~l~~l~~-----------------   57 (287)
T cd07840           1 YEKIAQIGEGTYGQVYKARNKKTGELVALKKIRMEN------EKEGFPITAIREIKLLQKLRH-----------------   57 (287)
T ss_pred             CeeeEEeccCCCeEEEEEEECCCCeEEEEEEEeccc------ccccchHHHHHHHHHHHhccC-----------------
Confidence            577899999999999999      789999998753      112233567889999999998                 


Q ss_pred             ccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc----cCCHHHHHHHHHHHHHHHHHH
Q psy9184         337 CSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK----YRSPNQTYAMILQVVFSLAVA  412 (562)
Q Consensus       337 ~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~----~l~e~~i~~I~~QIl~aL~yL  412 (562)
                               ||++++++++....           .+..|+||||+.+ ++...+.    .+++.+++.++.||+.||+||
T Consensus        58 ---------~~i~~~~~~~~~~~-----------~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~i~~~i~~al~~L  116 (287)
T cd07840          58 ---------PNIVRLKEIVTSKG-----------KGSIYMVFEYMDH-DLTGLLDSPEVKFTESQIKCYMKQLLEGLQYL  116 (287)
T ss_pred             ---------CCeeeheeeEecCC-----------CCcEEEEeccccc-cHHHHHhccCCCCCHHHHHHHHHHHHHHHHHH
Confidence                     99999998886521           2589999999974 4544442    488999999999999999999


Q ss_pred             HhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecCCc------EEEeecCCCccccCC
Q psy9184         413 EVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVGEK------ICYYDLSQDEELFEG  486 (562)
Q Consensus       413 H~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~~g------~v~~~l~~~pelF~g  486 (562)
                      |+ .|++|+||||+|||++.++                    .++|+|||+++......      ......|++||.+.+
T Consensus       117 H~-~~~~h~dl~p~nil~~~~~--------------------~~~l~d~g~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~  175 (287)
T cd07840         117 HS-NGILHRDIKGSNILINNDG--------------------VLKLADFGLARPYTKRNSADYTNRVITLWYRPPELLLG  175 (287)
T ss_pred             HH-CCceeccCcHHHeEEcCCC--------------------CEEEccccceeeccCCCcccccccccccccCCceeeEc
Confidence            99 7999999999999999886                    79999999998776432      234556889997765


Q ss_pred             C--CCcHHHHHHHhhcccCCCCCCCCCC
Q psy9184         487 E--GDYQFDMYRMMRKQCQNNWQNFTPK  512 (562)
Q Consensus       487 ~--~~~q~dIy~lm~~~~~~~W~~~~P~  512 (562)
                      .  ...+.|||++ |......+.+..|+
T Consensus       176 ~~~~~~~~Dv~sl-G~~l~el~t~~~p~  202 (287)
T cd07840         176 ATRYGPEVDMWSV-GCILAELFLGKPIF  202 (287)
T ss_pred             cccCChHHHHHHH-HHHHHHHHhCCCCC
Confidence            3  3566899886 33332333444444

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po

>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2

Probab=99.87  E-value=1.6e-21  Score=196.25  Aligned_cols=165  Identities=14%  Similarity=0.148  Sum_probs=126.6

Q ss_pred             eeeeccCceEEEEE--------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCccccccccc
Q psy9184         267 KKIGEGVYGEVFKL--------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTELLKCS  338 (562)
Q Consensus       267 ~~LG~GsfG~Vyka--------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~l~~~~  338 (562)
                      +.||+|+||.||+|        ..+++|.+....       .....+.+.+|+.+++.++|                   
T Consensus         1 ~~lg~G~~g~v~~~~~~~~~~~~~~~~k~~~~~~-------~~~~~~~~~~e~~~~~~l~h-------------------   54 (268)
T cd05086           1 QEIGNGWFGKVLLSEIYTDTGVARVVVKELKANA-------SSKEQNEFLQQGDPYRILQH-------------------   54 (268)
T ss_pred             CcCCCCcCceEEEEEEEcCCCcceEEEEEecCCC-------ChHHHHHHHHHHHHHhccCC-------------------
Confidence            36999999999998        245566655432       12345678999999999998                   


Q ss_pred             ccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc-------cCCHHHHHHHHHHHHHHHHH
Q psy9184         339 CVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK-------YRSPNQTYAMILQVVFSLAV  411 (562)
Q Consensus       339 iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~-------~l~e~~i~~I~~QIl~aL~y  411 (562)
                             |||+++++.+..             ....|+||||+.+|++.+.+.       .+++..+..++.||+.||+|
T Consensus        55 -------~~iv~~~~~~~~-------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~al~~  114 (268)
T cd05086          55 -------PNILQCLGQCVE-------------AIPYLLVFEYCELGDLKSYLSQEQWHRRNSQLLLLQRMACEIAAGVTH  114 (268)
T ss_pred             -------cchhheEEEecC-------------CCccEEEEecCCCCcHHHHHHhhhcccccccHHHHHHHHHHHHHHHHH
Confidence                   999999988864             457899999999998766553       25567788999999999999


Q ss_pred             HHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecC-------CcEEEeecCCCcccc
Q psy9184         412 AEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVG-------EKICYYDLSQDEELF  484 (562)
Q Consensus       412 LH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~-------~g~v~~~l~~~pelF  484 (562)
                      ||+ .+|+||||||+|||++.++                    .++|+|||+++....       .+...+..|++||+.
T Consensus       115 lH~-~~i~H~dikp~nil~~~~~--------------------~~~l~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~  173 (268)
T cd05086         115 MHK-HNFLHSDLALRNCFLTSDL--------------------TVKVGDYGIGPSRYKEDYIETEDDKCVPLRWLAPELV  173 (268)
T ss_pred             HHH-CCeeccCCccceEEEcCCc--------------------cEEecccccccccCcchhhhcccCCcCcccccCchhc
Confidence            999 7999999999999998876                    799999999865321       222345568889976


Q ss_pred             CCC--------CCcHHHHHHHh
Q psy9184         485 EGE--------GDYQFDMYRMM  498 (562)
Q Consensus       485 ~g~--------~~~q~dIy~lm  498 (562)
                      .+.        .....|||+..
T Consensus       174 ~~~~~~~~~~~~~~~~DiwslG  195 (268)
T cd05086         174 GEFHGGLITAEQTKPSNVWALG  195 (268)
T ss_pred             ccccCccccCCCCCcchhHHHH
Confidence            431        23347888753

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage

>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta

Probab=99.87  E-value=1.3e-21  Score=203.31  Aligned_cols=181  Identities=15%  Similarity=0.224  Sum_probs=136.4

Q ss_pred             eeeecc--CceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCccccccccc
Q psy9184         267 KKIGEG--VYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTELLKCS  338 (562)
Q Consensus       267 ~~LG~G--sfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~l~~~~  338 (562)
                      ..||+|  +||+||+|      +.||+|++....      ......+.+.+|+.+++.++|                   
T Consensus         4 ~~ig~g~~~~~~v~~a~~~~~~~~vaiK~~~~~~------~~~~~~~~~~~e~~~~~~l~h-------------------   58 (328)
T cd08226           4 VEIGRGFCNLTSVYLARHTPTGTLVTVRITDLEN------CTEEHLKALQNEVVLSHFFRH-------------------   58 (328)
T ss_pred             HHhCCcccCceeEEEEEEcCCCcEEEEEEecccc------CCHHHHHHHHHHHHHHHhCCC-------------------
Confidence            456666  99999999      899999987643      123445678899999999998                   


Q ss_pred             ccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc-----cCCHHHHHHHHHHHHHHHHHHH
Q psy9184         339 CVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK-----YRSPNQTYAMILQVVFSLAVAE  413 (562)
Q Consensus       339 iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~-----~l~e~~i~~I~~QIl~aL~yLH  413 (562)
                             |||++++++|..             ++..|+||||+.+|++.+.+.     .+++..+..++.||+.||+|||
T Consensus        59 -------~niv~~~~~~~~-------------~~~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~aL~~lH  118 (328)
T cd08226          59 -------PNIMTSWTVFTT-------------GSWLWVISPFMAYGSANSLLKTYFPEGMSEALIGNILFGALRGLNYLH  118 (328)
T ss_pred             -------CCcceEeeeEec-------------CCceEEEEecccCCCHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHH
Confidence                   999999999975             558999999999988766553     2788999999999999999999


Q ss_pred             hhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecCCc------------EEEeecCCCc
Q psy9184         414 VELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVGEK------------ICYYDLSQDE  481 (562)
Q Consensus       414 ~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~~g------------~v~~~l~~~p  481 (562)
                      + .+|+||||||+|||++.++                    .++++|||.+......+            ......|++|
T Consensus       119 ~-~~ivHrDlkp~Nill~~~~--------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aP  177 (328)
T cd08226         119 Q-NGYIHRNIKASHILISGDG--------------------LVSLSGLSHLYSLVRNGQKAKVVYDFPQFSTSVLPWLSP  177 (328)
T ss_pred             h-CCeecCCCCHHHEEEeCCC--------------------cEEEechHHHhhhhccCccccccccccccccCccCccCh
Confidence            9 7999999999999998876                    69999998543322110            0112347899


Q ss_pred             cccCCC---CCcHHHHHHHhhcccCCCCCCCCCCCh
Q psy9184         482 ELFEGE---GDYQFDMYRMMRKQCQNNWQNFTPKNN  514 (562)
Q Consensus       482 elF~g~---~~~q~dIy~lm~~~~~~~W~~~~P~tn  514 (562)
                      |.+.+.   .....|||+++-... ....+..|+..
T Consensus       178 E~~~~~~~~~~~~~DiwslG~~l~-el~~g~~p~~~  212 (328)
T cd08226         178 ELLRQDLYGYNVKSDIYSVGITAC-ELATGRVPFQD  212 (328)
T ss_pred             hhhcCCCCCCCchhhHHHHHHHHH-HHHhCCCCCCC
Confidence            988763   345689988643332 33345555543

Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig

>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional

Probab=99.86  E-value=9.4e-22  Score=198.40  Aligned_cols=179  Identities=18%  Similarity=0.174  Sum_probs=132.3

Q ss_pred             CCceeeee--eccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCcccc
Q psy9184         262 ALKNCKKI--GEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTE  333 (562)
Q Consensus       262 ~y~~~~~L--G~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~  333 (562)
                      +|.+.+.+  |+|+||.||++      ..+|+|++.....        .   .  .|+.+...+.+              
T Consensus        15 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~--------~---~--~e~~~~~~~~~--------------   67 (267)
T PHA03390         15 NCEIVKKLKLIDGKFGKVSVLKHKPTQKLFVQKIIKAKNF--------N---A--IEPMVHQLMKD--------------   67 (267)
T ss_pred             hhccccceeecCCCceEEEEEEEcCCCcEEEEEEEehhhc--------c---h--hhHHHHHHhhc--------------
Confidence            34555554  99999999999      6799999875421        0   0  12222222322              


Q ss_pred             cccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc---cCCHHHHHHHHHHHHHHHH
Q psy9184         334 LLKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK---YRSPNQTYAMILQVVFSLA  410 (562)
Q Consensus       334 l~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~---~l~e~~i~~I~~QIl~aL~  410 (562)
                                 |||++++++.|..             ++.+|+||||++||++.+.+.   .+++.++..++.||+.||.
T Consensus        68 -----------h~~iv~~~~~~~~-------------~~~~~iv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~  123 (267)
T PHA03390         68 -----------NPNFIKLYYSVTT-------------LKGHVLIMDYIKDGDLFDLLKKEGKLSEAEVKKIIRQLVEALN  123 (267)
T ss_pred             -----------CCCEEEEEEEEec-------------CCeeEEEEEcCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHH
Confidence                       4999999999875             458999999999998876653   4899999999999999999


Q ss_pred             HHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecCCc-EEEeecCCCccccCC-CC
Q psy9184         411 VAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVGEK-ICYYDLSQDEELFEG-EG  488 (562)
Q Consensus       411 yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~~g-~v~~~l~~~pelF~g-~~  488 (562)
                      |||+ .||+||||||+||+++..+.                   .++|+|||+++...... ...+..|++||.+.+ ..
T Consensus       124 ~lH~-~~i~H~dl~p~nil~~~~~~-------------------~~~l~dfg~~~~~~~~~~~~~~~~y~aPE~~~~~~~  183 (267)
T PHA03390        124 DLHK-HNIIHNDIKLENVLYDRAKD-------------------RIYLCDYGLCKIIGTPSCYDGTLDYFSPEKIKGHNY  183 (267)
T ss_pred             HHHh-CCeeeCCCCHHHEEEeCCCC-------------------eEEEecCccceecCCCccCCCCCcccChhhhcCCCC
Confidence            9999 79999999999999988753                   69999999998765422 223556889998876 34


Q ss_pred             CcHHHHHHHhhcccCCCCCCCCCC
Q psy9184         489 DYQFDMYRMMRKQCQNNWQNFTPK  512 (562)
Q Consensus       489 ~~q~dIy~lm~~~~~~~W~~~~P~  512 (562)
                      +...|+|++.-.. ...+.+..|+
T Consensus       184 ~~~~DvwslG~il-~~l~~g~~p~  206 (267)
T PHA03390        184 DVSFDWWAVGVLT-YELLTGKHPF  206 (267)
T ss_pred             CchhhHHHHHHHH-HHHHHCCCCC
Confidence            5568998864332 2333444444

>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase

Probab=99.86  E-value=6.1e-21  Score=199.90  Aligned_cols=178  Identities=17%  Similarity=0.244  Sum_probs=137.7

Q ss_pred             CCCCceeeeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCcccc
Q psy9184         260 SSALKNCKKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTE  333 (562)
Q Consensus       260 ~~~y~~~~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~  333 (562)
                      .++|++.+.||+|+||.||+|      ..||||++....      ........+.+|+.+++.++|              
T Consensus        14 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~------~~~~~~~~~~~E~~~l~~l~h--------------   73 (343)
T cd07880          14 PDRYRDLKQVGSGAYGTVCSALDRRTGAKVAIKKLYRPF------QSELFAKRAYRELRLLKHMKH--------------   73 (343)
T ss_pred             ccceEEEEEeeecCCeEEEEEEECCCCcEEEEEEecccc------cchHHHHHHHHHHHHHHhcCC--------------
Confidence            367999999999999999999      789999986532      122334567899999999998              


Q ss_pred             cccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCcccc--ccCCHHHHHHHHHHHHHHHHH
Q psy9184         334 LLKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDI--KYRSPNQTYAMILQVVFSLAV  411 (562)
Q Consensus       334 l~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l--~~l~e~~i~~I~~QIl~aL~y  411 (562)
                                  |||+++++.|....       ....-...|+||||+ |+++...+  ..+++..++.++.||+.||.|
T Consensus        74 ------------~~iv~~~~~~~~~~-------~~~~~~~~~lv~e~~-~~~l~~~~~~~~l~~~~~~~i~~qi~~al~~  133 (343)
T cd07880          74 ------------ENVIGLLDVFTPDL-------SLDRFHDFYLVMPFM-GTDLGKLMKHEKLSEDRIQFLVYQMLKGLKY  133 (343)
T ss_pred             ------------CCccceeeeecCCc-------cccccceEEEEEecC-CCCHHHHHhcCCCCHHHHHHHHHHHHHHHHH
Confidence                        89999888876421       111123579999999 45443333  258999999999999999999


Q ss_pred             HHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecCC--cEEEeecCCCccccCCC--
Q psy9184         412 AEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVGE--KICYYDLSQDEELFEGE--  487 (562)
Q Consensus       412 LH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~~--g~v~~~l~~~pelF~g~--  487 (562)
                      ||+ .||+||||||+|||++.++                    .++|+|||+++.....  +...+..|++||.+.+.  
T Consensus       134 LH~-~gi~H~dlkp~Nill~~~~--------------------~~kl~dfg~~~~~~~~~~~~~~~~~y~aPE~~~~~~~  192 (343)
T cd07880         134 IHA-AGIIHRDLKPGNLAVNEDC--------------------ELKILDFGLARQTDSEMTGYVVTRWYRAPEVILNWMH  192 (343)
T ss_pred             HHh-CCeecCCCCHHHEEEcCCC--------------------CEEEeecccccccccCccccccCCcccCHHHHhCCCC
Confidence            999 7999999999999999876                    7999999999876432  23345678899987652  


Q ss_pred             CCcHHHHHHHh
Q psy9184         488 GDYQFDMYRMM  498 (562)
Q Consensus       488 ~~~q~dIy~lm  498 (562)
                      .....|+|++.
T Consensus       193 ~~~~~Di~slG  203 (343)
T cd07880         193 YTQTVDIWSVG  203 (343)
T ss_pred             CCcHHHHHHHH
Confidence            44568998864

Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12

>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases

Probab=99.86  E-value=3.2e-21  Score=194.35  Aligned_cols=167  Identities=23%  Similarity=0.288  Sum_probs=135.2

Q ss_pred             CceeeeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcC-CccccCCCCCCcccccc
Q psy9184         263 LKNCKKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETS-DLQYRTENSTPCFTELL  335 (562)
Q Consensus       263 y~~~~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~-h~~~~~~n~~p~fv~l~  335 (562)
                      |.+.+.||.|+||.||+|      +.||||.+.....       ........+|+..++.+. |                
T Consensus         1 y~~~~~ig~g~~g~v~~~~~~~~~~~~~ik~~~~~~~-------~~~~~~~~~e~~~l~~~~~h----------------   57 (283)
T cd07830           1 YKVIKQLGDGTFGSVYLARNKETGELVAIKKMKKKFY-------SWEECMNLREVKSLRKLNEH----------------   57 (283)
T ss_pred             CeeheeeccCCceEEEEEEECCCCcEEEEEEehhhcc-------chhHHHHHHHHHHHHhccCC----------------
Confidence            567899999999999999      6799999875431       111123457999999999 6                


Q ss_pred             cccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc-----cCCHHHHHHHHHHHHHHHH
Q psy9184         336 KCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK-----YRSPNQTYAMILQVVFSLA  410 (562)
Q Consensus       336 ~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~-----~l~e~~i~~I~~QIl~aL~  410 (562)
                                ||++++++.+..             ++..|+||||+ +|++.+.+.     .+++.++..++.|++.||.
T Consensus        58 ----------~~i~~~~~~~~~-------------~~~~~lv~e~~-~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~  113 (283)
T cd07830          58 ----------PNIVKLKEVFRE-------------NDELYFVFEYM-EGNLYQLMKDRKGKPFSESVIRSIIYQILQGLA  113 (283)
T ss_pred             ----------CCchhHHHHhhc-------------CCcEEEEEecC-CCCHHHHHHhcccccCCHHHHHHHHHHHHHHHH
Confidence                      999999999875             56899999999 677766553     4789999999999999999


Q ss_pred             HHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecC----CcEEEeecCCCccccCC
Q psy9184         411 VAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVG----EKICYYDLSQDEELFEG  486 (562)
Q Consensus       411 yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~----~g~v~~~l~~~pelF~g  486 (562)
                      |||+ ++++|+||+|+||+++..+                    .++|+|||+++....    ...+.+..|++||.+.+
T Consensus       114 ~Lh~-~~i~H~dl~~~ni~i~~~~--------------------~~~l~d~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~  172 (283)
T cd07830         114 HIHK-HGFFHRDLKPENLLVSGPE--------------------VVKIADFGLAREIRSRPPYTDYVSTRWYRAPEILLR  172 (283)
T ss_pred             HHHH-CCcccCCCChhhEEEcCCC--------------------CEEEeecccceeccCCCCcCCCCCcccccCceeeec
Confidence            9999 7999999999999999876                    799999999987754    23345667889998754


Q ss_pred             C--CCcHHHHHHH
Q psy9184         487 E--GDYQFDMYRM  497 (562)
Q Consensus       487 ~--~~~q~dIy~l  497 (562)
                      .  .+...|+|+.
T Consensus       173 ~~~~~~~~Di~s~  185 (283)
T cd07830         173 STSYSSPVDIWAL  185 (283)
T ss_pred             CcCcCCccchhhH
Confidence            3  3556888875

Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili

>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases

Probab=99.86  E-value=3.1e-21  Score=190.36  Aligned_cols=220  Identities=17%  Similarity=0.211  Sum_probs=161.2

Q ss_pred             eeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCcccccccccccCC
Q psy9184         269 IGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTELLKCSCVRG  342 (562)
Q Consensus       269 LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~l~~~~iv~g  342 (562)
                      ||.|+||.||++      +.+|+|++....     .........+..|+.+++.++|                       
T Consensus         1 lg~G~~~~v~~~~~~~~~~~~~~k~~~~~~-----~~~~~~~~~~~~e~~~l~~l~h-----------------------   52 (250)
T cd05123           1 LGKGSFGKVLLVRKKDTGKLYAMKVLKKKK-----IIKRKEVEHTLTERNILSRINH-----------------------   52 (250)
T ss_pred             CCCCCceEEEEEEECCCCcEEEEEEeehhh-----hcchHHHHHHHHHHHHHHHcCC-----------------------
Confidence            699999999999      789999988653     1222345678899999999998                       


Q ss_pred             CCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc---cCCHHHHHHHHHHHHHHHHHHHhhCCeE
Q psy9184         343 RYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK---YRSPNQTYAMILQVVFSLAVAEVELEFE  419 (562)
Q Consensus       343 ~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~---~l~e~~i~~I~~QIl~aL~yLH~~~~Ii  419 (562)
                         |||+++++.+..             +..+|++||++.++++.+.+.   .+++..+..++.|++.||.|||+ .+++
T Consensus        53 ---~~i~~~~~~~~~-------------~~~~~~v~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lh~-~~~~  115 (250)
T cd05123          53 ---PFIVKLHYAFQT-------------EEKLYLVLEYAPGGELFSHLSKEGRFSEERARFYAAEIVLALEYLHS-LGII  115 (250)
T ss_pred             ---CcHHHHHHHeec-------------CCeeEEEEecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHH-CCce
Confidence               999999988875             568999999999888876664   37899999999999999999999 7999


Q ss_pred             eccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecCC-----cEEEeecCCCccccCCC-CCcHHH
Q psy9184         420 HRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVGE-----KICYYDLSQDEELFEGE-GDYQFD  493 (562)
Q Consensus       420 HRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~~-----g~v~~~l~~~pelF~g~-~~~q~d  493 (562)
                      |+||+|+||+++.++                    .++|+|||++......     .......|++||.+.+. ...+.|
T Consensus       116 H~~l~p~ni~~~~~~--------------------~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~D  175 (250)
T cd05123         116 YRDLKPENILLDADG--------------------HIKLTDFGLAKELSSEGSRTNTFCGTPEYLAPEVLLGKGYGKAVD  175 (250)
T ss_pred             ecCCCcceEEEcCCC--------------------cEEEeecCcceecccCCCcccCCcCCccccChHHhCCCCCCchhh
Confidence            999999999999886                    7999999999876542     23345568889987764 455689


Q ss_pred             HHHHhhcccCCCCCCCCCCChhhhHHHHHHHHhhcccCCCCCCCchhHHHHHHHHHHHhcCCCcCcCC
Q psy9184         494 MYRMMRKQCQNNWQNFTPKNNVFWIHYLVDKATCLKKGYQYLRAPRHQAFELLEELGQNALHFDSCYE  561 (562)
Q Consensus       494 Iy~lm~~~~~~~W~~~~P~tn~~wl~yl~~~Ll~~~~~~~~~~~~~~~~~~~l~~l~~~~l~~~s~~~  561 (562)
                      +|.+ |......|.+..|+....- .-+..........++...      -+.+.+|.+++|..+...|
T Consensus       176 ~~sl-G~~~~~l~~g~~p~~~~~~-~~~~~~~~~~~~~~~~~~------~~~l~~~i~~~l~~~p~~R  235 (250)
T cd05123         176 WWSL-GVLLYEMLTGKPPFYAEDR-KEIYEKILKDPLRFPEFL------SPEARDLISGLLQKDPTKR  235 (250)
T ss_pred             HHHH-HHHHHHHHHCCCCCCCCCH-HHHHHHHhcCCCCCCCCC------CHHHHHHHHHHhcCCHhhC
Confidence            9886 4444445556666532221 112222222111122211      3466777888888766544

Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the

>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2

Probab=99.86  E-value=1.2e-21  Score=201.81  Aligned_cols=186  Identities=18%  Similarity=0.257  Sum_probs=143.5

Q ss_pred             CCCCceeeeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCcccc
Q psy9184         260 SSALKNCKKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTE  333 (562)
Q Consensus       260 ~~~y~~~~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~  333 (562)
                      ...|...+.||+|+||.||+|      ..+|+|.+....     ........++.+|+.+++.++|              
T Consensus        14 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~-----~~~~~~~~~~~~e~~~l~~l~h--------------   74 (308)
T cd06634          14 EKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSG-----KQSNEKWQDIIKEVRFLQKLRH--------------   74 (308)
T ss_pred             HHHHHHHHheeeCCCEEEEEEEEcCCCcEEEEEEEeccc-----ccChHHHHHHHHHHHHHHhCCC--------------
Confidence            355788899999999999999      679999987542     1123445678899999999998              


Q ss_pred             cccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc----cCCHHHHHHHHHHHHHHH
Q psy9184         334 LLKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK----YRSPNQTYAMILQVVFSL  409 (562)
Q Consensus       334 l~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~----~l~e~~i~~I~~QIl~aL  409 (562)
                                  +|++++++++..             ....|+||||+. |++.+.+.    .+++.++..++.|++.||
T Consensus        75 ------------~~i~~~~~~~~~-------------~~~~~lv~e~~~-~~l~~~~~~~~~~l~~~~~~~~~~~l~~~l  128 (308)
T cd06634          75 ------------PNTIQYRGCYLR-------------EHTAWLVMEYCL-GSASDLLEVHKKPLQEVEIAAVTHGALQGL  128 (308)
T ss_pred             ------------CCcccEEEEEEc-------------CCeeEEEEEccC-CCHHHHHHHcCCCCCHHHHHHHHHHHHHHH
Confidence                        999999888764             458899999997 55554432    378999999999999999


Q ss_pred             HHHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecCC-cEEEeecCCCccccCC--
Q psy9184         410 AVAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVGE-KICYYDLSQDEELFEG--  486 (562)
Q Consensus       410 ~yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~~-g~v~~~l~~~pelF~g--  486 (562)
                      .|||+ .+++||||||+|||++.++                    .++|+|||++...... ....+..|.+||.+.+  
T Consensus       129 ~~LH~-~~i~H~dl~p~nil~~~~~--------------------~~kl~dfg~~~~~~~~~~~~~~~~y~aPE~~~~~~  187 (308)
T cd06634         129 AYLHS-HNMIHRDVKAGNILLSEPG--------------------LVKLGDFGSASIMAPANXFVGTPYWMAPEVILAMD  187 (308)
T ss_pred             HHHHh-CCcccCCCCHHhEEECCCC--------------------cEEECCcccceeecCcccccCCccccCHHHHhhcc
Confidence            99999 7999999999999998876                    7999999999876542 2334567889998753  


Q ss_pred             --CCCcHHHHHHHhhcccCCCCCCCCCC
Q psy9184         487 --EGDYQFDMYRMMRKQCQNNWQNFTPK  512 (562)
Q Consensus       487 --~~~~q~dIy~lm~~~~~~~W~~~~P~  512 (562)
                        ..+...|||++. ......+.+..|+
T Consensus       188 ~~~~~~~~Di~slG-~il~el~~g~~p~  214 (308)
T cd06634         188 EGQYDGKVDVWSLG-ITCIELAERKPPL  214 (308)
T ss_pred             cCCCCcccchHHHH-HHHHHHHcCCCCC
Confidence              345568998763 3333344555554

Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin

>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3

Probab=99.86  E-value=1.1e-21  Score=197.15  Aligned_cols=165  Identities=18%  Similarity=0.228  Sum_probs=128.2

Q ss_pred             eeeeccCceEEEEE--------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCccccccccc
Q psy9184         267 KKIGEGVYGEVFKL--------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTELLKCS  338 (562)
Q Consensus       267 ~~LG~GsfG~Vyka--------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~l~~~~  338 (562)
                      +.||+|+||.||+|        ..+|+|.+....       .......+.+|+.+++.++|                   
T Consensus         1 ~~lg~G~~g~Vy~~~~~~~~~~~~~~~k~~~~~~-------~~~~~~~~~~E~~~l~~l~h-------------------   54 (269)
T cd05087           1 KEIGNGWFGKVILGEVNSGYTPAQVVVKELRVSA-------SVQEQMKFLEEAQPYRSLQH-------------------   54 (269)
T ss_pred             CcccccCCceEEEEEEcCCCCceEEEEEecCCCC-------ChHHHHHHHHHHHHHHhCCC-------------------
Confidence            36899999999998        468999887543       12223468889999999998                   


Q ss_pred             ccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc--------cCCHHHHHHHHHHHHHHHH
Q psy9184         339 CVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK--------YRSPNQTYAMILQVVFSLA  410 (562)
Q Consensus       339 iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~--------~l~e~~i~~I~~QIl~aL~  410 (562)
                             |||+++++.+.+             ....|+||||+++|++.+.+.        ..++..+..++.|++.||+
T Consensus        55 -------~~iv~~~~~~~~-------------~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~  114 (269)
T cd05087          55 -------SNLLQCLGQCTE-------------VTPYLLVMEFCPLGDLKGYLRSCRKAELMTPDPTTLQRMACEIALGLL  114 (269)
T ss_pred             -------CCEeeEEEEEcC-------------CCCcEEEEECCCCCcHHHHHHHhhhcccccccHHHHHHHHHHHHHHHH
Confidence                   999999988764             446899999999998766543        2456778889999999999


Q ss_pred             HHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecCCc-------EEEeecCCCccc
Q psy9184         411 VAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVGEK-------ICYYDLSQDEEL  483 (562)
Q Consensus       411 yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~~g-------~v~~~l~~~pel  483 (562)
                      |||+ .+++||||||+||+++.++                    .++|+|||+++......       ......|++||+
T Consensus       115 ~lH~-~~i~H~dlkp~nil~~~~~--------------------~~kL~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~  173 (269)
T cd05087         115 HLHK-NNFIHSDLALRNCLLTADL--------------------TVKIGDYGLSHNKYKEDYYVTPDQLWVPLRWIAPEL  173 (269)
T ss_pred             HHHH-CCEeccccCcceEEEcCCC--------------------cEEECCccccccccCcceeecCCCcCCcccccCHhH
Confidence            9999 7999999999999998875                    79999999997543321       122345789998


Q ss_pred             cCCC--------CCcHHHHHHHh
Q psy9184         484 FEGE--------GDYQFDMYRMM  498 (562)
Q Consensus       484 F~g~--------~~~q~dIy~lm  498 (562)
                      +.+.        ...+.|||++.
T Consensus       174 ~~~~~~~~~~~~~~~~~DiwslG  196 (269)
T cd05087         174 VDEVHGNLLVVDQTKESNVWSLG  196 (269)
T ss_pred             hccccccccccCCCccchhHHHH
Confidence            8652        13457888753

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells

>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5

Probab=99.86  E-value=1.5e-21  Score=203.32  Aligned_cols=175  Identities=19%  Similarity=0.268  Sum_probs=139.1

Q ss_pred             CCCceeeeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCccccc
Q psy9184         261 SALKNCKKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTEL  334 (562)
Q Consensus       261 ~~y~~~~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~l  334 (562)
                      ++|++.+.||+|+||.||+|      ..||+|++....      ........+.+|+.+++.++|               
T Consensus         5 ~~y~~~~~lg~g~~g~v~~~~~~~~~~~valK~~~~~~------~~~~~~~~~~~e~~~l~~l~h---------------   63 (334)
T cd07855           5 SRYKPIENIGSGAYGVVCSAIDTRSGKKVAIKKIPHAF------DVPTLAKRTLRELKILRHFKH---------------   63 (334)
T ss_pred             hceeeeeeeecCCCeEEEEEEEcCCCCEEEEEEecccc------ccccchHHHHHHHHHHHhcCC---------------
Confidence            67899999999999999999      789999987542      112334567789999999998               


Q ss_pred             ccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc---cCCHHHHHHHHHHHHHHHHH
Q psy9184         335 LKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK---YRSPNQTYAMILQVVFSLAV  411 (562)
Q Consensus       335 ~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~---~l~e~~i~~I~~QIl~aL~y  411 (562)
                                 |||++++++|....         .....+|+||||+. |.+...+.   .+++..++.++.||+.||.|
T Consensus        64 -----------~~iv~~~~~~~~~~---------~~~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~i~~qi~~aL~~  122 (334)
T cd07855          64 -----------DNIIAIRDILRPPG---------ADFKDVYVVMDLME-SDLHHIIHSDQPLTEEHIRYFLYQLLRGLKY  122 (334)
T ss_pred             -----------CCccCHHHhccccC---------CCCceEEEEEehhh-hhHHHHhccCCCCCHHHHHHHHHHHHHHHHH
Confidence                       99999999886421         12457899999996 55544442   38999999999999999999


Q ss_pred             HHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecCC---------cEEEeecCCCcc
Q psy9184         412 AEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVGE---------KICYYDLSQDEE  482 (562)
Q Consensus       412 LH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~~---------g~v~~~l~~~pe  482 (562)
                      ||+ .+|+||||||+|||++.++                    .++|+|||+++.....         +.+.+..|.+||
T Consensus       123 LH~-~~ivH~dlkp~Nil~~~~~--------------------~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~y~~PE  181 (334)
T cd07855         123 IHS-ANVIHRDLKPSNLLVNEDC--------------------ELRIGDFGMARGLSSSPTEHKYFMTEYVATRWYRAPE  181 (334)
T ss_pred             HHH-CCeecCCCCHHHEEEcCCC--------------------cEEecccccceeecccCcCCCcccccccccccccChH
Confidence            999 7999999999999999886                    7999999999876431         224456688899


Q ss_pred             ccCCC--CCcHHHHHHHh
Q psy9184         483 LFEGE--GDYQFDMYRMM  498 (562)
Q Consensus       483 lF~g~--~~~q~dIy~lm  498 (562)
                      .+.+.  .+...|||++.
T Consensus       182 ~~~~~~~~~~~~Di~slG  199 (334)
T cd07855         182 LLLSLPEYTTAIDMWSVG  199 (334)
T ss_pred             HhcCCcccccccchHHHH
Confidence            87652  34558888864

Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the

>KOG1026|consensus

Probab=99.86  E-value=7.3e-22  Score=219.97  Aligned_cols=179  Identities=21%  Similarity=0.223  Sum_probs=150.1

Q ss_pred             ccccccCCCCCCceeeeeeccCceEEEEE-----------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCc
Q psy9184         252 VSFEDRYPSSALKNCKKIGEGVYGEVFKL-----------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDL  320 (562)
Q Consensus       252 ~~f~~~~~~~~y~~~~~LG~GsfG~Vyka-----------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~  320 (562)
                      ......++..+.+..+.||+|+||+||+|           ..||||.++...       +.+...+|.+|+.++..|+| 
T Consensus       477 ~~~~~~i~r~~i~~~~eLGegaFGkVf~a~~~~l~p~~~~~lVAVK~LKd~a-------~~~~~~dF~REaeLla~l~H-  548 (774)
T KOG1026|consen  477 DLKVLEIPRSDIVFKEELGEGAFGKVFLAEAYGLLPGQDEQLVAVKALKDKA-------ENQARQDFRREAELLAELQH-  548 (774)
T ss_pred             ccceeEechhheeehhhhcCchhhhhhhhhccCCCCCccceehhHhhhcccc-------cHHHHHHHHHHHHHHHhccC-
Confidence            34444567788899999999999999999           799999998654       34466899999999999999 


Q ss_pred             cccCCCCCCcccccccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc---------
Q psy9184         321 QYRTENSTPCFTELLKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK---------  391 (562)
Q Consensus       321 ~~~~~n~~p~fv~l~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~---------  391 (562)
                                               ||||++++++..             ++.+|+|+|||..|+|-+.+.         
T Consensus       549 -------------------------~nIVrLlGVC~~-------------~~P~~MvFEYm~~GDL~eFLra~sP~a~~~  590 (774)
T KOG1026|consen  549 -------------------------PNIVRLLGVCRE-------------GDPLCMVFEYMDHGDLHEFLRARSPKADKL  590 (774)
T ss_pred             -------------------------CCeEEEEEEEcc-------------CCeeEEEEEecccccHHHHHHhhCCccccc
Confidence                                     999999999875             668999999999997754442         


Q ss_pred             ----c----CCHHHHHHHHHHHHHHHHHHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccc
Q psy9184         392 ----Y----RSPNQTYAMILQVVFSLAVAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTI  463 (562)
Q Consensus       392 ----~----l~e~~i~~I~~QIl~aL~yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGL  463 (562)
                          .    ++..+.+.|+.||+.|+.||-+ +.||||||-..|+||..+-                    .|||+||||
T Consensus       591 ~~g~~~~~~L~~~q~L~iA~QIAaGM~YLs~-~~FVHRDLATRNCLVge~l--------------------~VKIsDfGL  649 (774)
T KOG1026|consen  591 ASGQDTPPPLSTSQFLHIATQIAAGMEYLSS-HHFVHRDLATRNCLVGENL--------------------VVKISDFGL  649 (774)
T ss_pred             cCCCCCCCCCCHHHHHHHHHHHHHHHHHHHh-Ccccccchhhhhceeccce--------------------EEEeccccc
Confidence                1    6788999999999999999999 8999999999999999985                    899999999


Q ss_pred             eeeecC-------CcEEEeecCCCcc-ccCCCCCcHHHHHHH
Q psy9184         464 SRCFVG-------EKICYYDLSQDEE-LFEGEGDYQFDMYRM  497 (562)
Q Consensus       464 Sr~~~~-------~g~v~~~l~~~pe-lF~g~~~~q~dIy~l  497 (562)
                      +|....       .-.+..--||+|| ++.+.....+|||+.
T Consensus       650 sRdiYssDYYk~~~~t~lPIRWMppEsIly~kFTteSDVWs~  691 (774)
T KOG1026|consen  650 SRDIYSSDYYKVRGNTLLPIRWMPPESILYGKFTTESDVWSF  691 (774)
T ss_pred             chhhhhhhhhcccCCceeeeecCCHHHhhcCcccchhhhhhh
Confidence            998765       2344455678877 777877777888764

>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase

Probab=99.86  E-value=2e-21  Score=197.76  Aligned_cols=227  Identities=18%  Similarity=0.225  Sum_probs=159.5

Q ss_pred             CCceeeeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCcccccc
Q psy9184         262 ALKNCKKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTELL  335 (562)
Q Consensus       262 ~y~~~~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~l~  335 (562)
                      .|...+.||+|++|.||++      ..+|+|.+....        ....+.+.+|+.+++.++|                
T Consensus        20 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~--------~~~~~~~~~e~~~l~~~~h----------------   75 (285)
T cd06648          20 YLDNFVKIGEGSTGIVCIATDKSTGRQVAVKKMDLRK--------QQRRELLFNEVVIMRDYQH----------------   75 (285)
T ss_pred             hhhcceEeccCCCeEEEEEEECCCCCEEEEEEEeccc--------hhHHHHHHHHHHHHHHcCC----------------
Confidence            4566789999999999999      679999987542        2334567899999999998                


Q ss_pred             cccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc--cCCHHHHHHHHHHHHHHHHHHH
Q psy9184         336 KCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK--YRSPNQTYAMILQVVFSLAVAE  413 (562)
Q Consensus       336 ~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~--~l~e~~i~~I~~QIl~aL~yLH  413 (562)
                                ||++++++.+..             .+..|+++||+.|+++.+.+.  .+++.++..++.||+.||+|||
T Consensus        76 ----------~~vv~~~~~~~~-------------~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~ql~~~l~~lH  132 (285)
T cd06648          76 ----------PNIVEMYSSYLV-------------GDELWVVMEFLEGGALTDIVTHTRMNEEQIATVCLAVLKALSFLH  132 (285)
T ss_pred             ----------CChheEEEEEEc-------------CCeEEEEEeccCCCCHHHHHHhCCCCHHHHHHHHHHHHHHHHHHH
Confidence                      999999998764             558999999999887765553  4889999999999999999999


Q ss_pred             hhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecCC-----cEEEeecCCCccccCC-C
Q psy9184         414 VELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVGE-----KICYYDLSQDEELFEG-E  487 (562)
Q Consensus       414 ~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~~-----g~v~~~l~~~pelF~g-~  487 (562)
                      + .||+||||+|+||+++.++                    .++|+|||++......     ....+..|++||.+.+ .
T Consensus       133 ~-~~i~H~dl~p~Nil~~~~~--------------------~~~l~d~g~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~  191 (285)
T cd06648         133 A-QGVIHRDIKSDSILLTSDG--------------------RVKLSDFGFCAQVSKEVPRRKSLVGTPYWMAPEVISRLP  191 (285)
T ss_pred             h-CCeecCCCChhhEEEcCCC--------------------cEEEcccccchhhccCCcccccccCCccccCHHHhcCCC
Confidence            9 7999999999999998876                    7999999988754431     2234567889998765 3


Q ss_pred             CCcHHHHHHHhhcccCCCCCCCCCCChhhhHHHHHHHHhhcccCCCCCCCchhHHHHHHHHHHHhcCCCcCcCC
Q psy9184         488 GDYQFDMYRMMRKQCQNNWQNFTPKNNVFWIHYLVDKATCLKKGYQYLRAPRHQAFELLEELGQNALHFDSCYE  561 (562)
Q Consensus       488 ~~~q~dIy~lm~~~~~~~W~~~~P~tn~~wl~yl~~~Ll~~~~~~~~~~~~~~~~~~~l~~l~~~~l~~~s~~~  561 (562)
                      .+.+.|+|++.-. ....+.+..|+.+...... ...+.. ........  ....-..+..|.+.+|+++...|
T Consensus       192 ~~~~~Dv~slGv~-l~ell~g~~p~~~~~~~~~-~~~~~~-~~~~~~~~--~~~~~~~l~~li~~~l~~~p~~R  260 (285)
T cd06648         192 YGTEVDIWSLGIM-VIEMVDGEPPYFNEPPLQA-MKRIRD-NLPPKLKN--LHKVSPRLRSFLDRMLVRDPAQR  260 (285)
T ss_pred             CCCcccHHHHHHH-HHHHHhCCCCCcCCCHHHH-HHHHHh-cCCCCCcc--cccCCHHHHHHHHHHcccChhhC
Confidence            4566888875322 2233344444422211111 112222 11111100  00112467778888888776554

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun

>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase

Probab=99.86  E-value=1.9e-21  Score=195.71  Aligned_cols=183  Identities=21%  Similarity=0.182  Sum_probs=138.0

Q ss_pred             CceeeeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCccccccc
Q psy9184         263 LKNCKKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTELLK  336 (562)
Q Consensus       263 y~~~~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~l~~  336 (562)
                      |++.++||+|+||.||+|      ..||+|+++....    .  .. .....+|+.+++++..                 
T Consensus         1 y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~----~--~~-~~~~~~e~~~l~~l~~-----------------   56 (282)
T cd07831           1 YKILGKIGEGTFSEVLKAQSRKTGKYYAIKCMKKHFK----S--LE-QVNNLREIQALRRLSP-----------------   56 (282)
T ss_pred             CceEeeccccccceEEEEEEcCCCcEEEEEEehhccC----C--ch-hhhHHHHHHHHhhcCC-----------------
Confidence            577899999999999999      7899999875421    1  11 1234578999998874                 


Q ss_pred             ccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc----cCCHHHHHHHHHHHHHHHHHH
Q psy9184         337 CSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK----YRSPNQTYAMILQVVFSLAVA  412 (562)
Q Consensus       337 ~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~----~l~e~~i~~I~~QIl~aL~yL  412 (562)
                              |||++++++.+.+..           .+.+++||||+. |++++.+.    .+++.+++.++.||+.||.||
T Consensus        57 --------h~~i~~~~~~~~~~~-----------~~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~L  116 (282)
T cd07831          57 --------HPNILRLIEVLFDRK-----------TGRLALVFELMD-MNLYELIKGRKRPLPEKRVKSYMYQLLKSLDHM  116 (282)
T ss_pred             --------CCCccceEEEEecCC-----------CCcEEEEEecCC-ccHHHHHHhccCCCCHHHHHHHHHHHHHHHHHH
Confidence                    499999999887521           257899999997 46666553    378999999999999999999


Q ss_pred             HhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecCC----cEEEeecCCCccccCC--
Q psy9184         413 EVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVGE----KICYYDLSQDEELFEG--  486 (562)
Q Consensus       413 H~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~~----g~v~~~l~~~pelF~g--  486 (562)
                      |+ .+|+||||||+||+++. +                    .++|+|||+++.....    ....+..|.+||.+.+  
T Consensus       117 H~-~~i~H~dl~p~ni~l~~-~--------------------~~kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~  174 (282)
T cd07831         117 HR-NGIFHRDIKPENILIKD-D--------------------ILKLADFGSCRGIYSKPPYTEYISTRWYRAPECLLTDG  174 (282)
T ss_pred             HH-CCceecccCHHHEEEcC-C--------------------CeEEEecccccccccCCCcCCCCCCcccCChhHhhcCC
Confidence            99 79999999999999998 5                    7999999999876431    2234567889996643  


Q ss_pred             CCCcHHHHHHHhhcccCCCCCCCCCC
Q psy9184         487 EGDYQFDMYRMMRKQCQNNWQNFTPK  512 (562)
Q Consensus       487 ~~~~q~dIy~lm~~~~~~~W~~~~P~  512 (562)
                      ......|||++. ......+.+..|+
T Consensus       175 ~~~~~~Di~slG-v~l~el~~~~~p~  199 (282)
T cd07831         175 YYGPKMDIWAVG-CVFFEILSLFPLF  199 (282)
T ss_pred             CCCcchhHHHHH-HHHHHHHcCCcCC
Confidence            235568998864 3332333444444

Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.

>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3

Probab=99.86  E-value=2.8e-21  Score=193.82  Aligned_cols=176  Identities=14%  Similarity=0.150  Sum_probs=131.4

Q ss_pred             CceeeeeeccCceEEEEE---------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCcccc
Q psy9184         263 LKNCKKIGEGVYGEVFKL---------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTE  333 (562)
Q Consensus       263 y~~~~~LG~GsfG~Vyka---------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~  333 (562)
                      |.+.+.||+|+||.||+|         +.+|||++....      ......+++.+|+.+++.++|              
T Consensus         1 ~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~------~~~~~~~~~~~E~~~l~~l~h--------------   60 (273)
T cd05074           1 FTLGRMLGKGEFGSVREAQLKSEDGSFQKVAVKMLKADI------FSSSDIEEFLREAACMKEFDH--------------   60 (273)
T ss_pred             CcchhcccCCCCCCEEeeEeeccCCCceEEEEEEecccc------CChHHHHHHHHHHHHHhcCCC--------------
Confidence            466789999999999998         569999997642      223345678899999999998              


Q ss_pred             cccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc---------cCCHHHHHHHHHH
Q psy9184         334 LLKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK---------YRSPNQTYAMILQ  404 (562)
Q Consensus       334 l~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~---------~l~e~~i~~I~~Q  404 (562)
                                  |||+++++++.....       .......++++||+.+|++...+.         .+++..+..++.|
T Consensus        61 ------------~~i~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~  121 (273)
T cd05074          61 ------------PNVIKLIGVSLRSRA-------KGRLPIPMVILPFMKHGDLHTFLLMSRIGEEPFTLPLQTLVRFMID  121 (273)
T ss_pred             ------------CCcceEEEEEccCCC-------CCcccceEEEEecCCCCcHHHHHHHhcccCCCCCCCHHHHHHHHHH
Confidence                        899999887754210       000124588999999997643321         3688899999999


Q ss_pred             HHHHHHHHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecCCc-----E--EEeec
Q psy9184         405 VVFSLAVAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVGEK-----I--CYYDL  477 (562)
Q Consensus       405 Il~aL~yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~~g-----~--v~~~l  477 (562)
                      |+.||+|||+ .+|+||||||+|||++.++                    .++|+|||+++......     +  .....
T Consensus       122 i~~~l~~lH~-~~i~H~dikp~nili~~~~--------------------~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~  180 (273)
T cd05074         122 IASGMEYLSS-KNFIHRDLAARNCMLNENM--------------------TVCVADFGLSKKIYSGDYYRQGCASKLPVK  180 (273)
T ss_pred             HHHHHHHHHh-CCEeecccchhhEEEcCCC--------------------CEEECcccccccccCCcceecCCCccCchh
Confidence            9999999999 7999999999999998765                    79999999998654211     1  11234


Q ss_pred             CCCccccCC-CCCcHHHHHHHh
Q psy9184         478 SQDEELFEG-EGDYQFDMYRMM  498 (562)
Q Consensus       478 ~~~pelF~g-~~~~q~dIy~lm  498 (562)
                      |++||.+.+ ..+..+|||++.
T Consensus       181 ~~~pe~~~~~~~~~~sDi~slG  202 (273)
T cd05074         181 WLALESLADNVYTTHSDVWAFG  202 (273)
T ss_pred             hcCHhHHhcCccchhhhhHHHH
Confidence            567776554 345568888853

Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac

>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases

Probab=99.86  E-value=3.4e-21  Score=194.46  Aligned_cols=182  Identities=19%  Similarity=0.274  Sum_probs=140.6

Q ss_pred             CceeeeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCccccccc
Q psy9184         263 LKNCKKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTELLK  336 (562)
Q Consensus       263 y~~~~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~l~~  336 (562)
                      |+..+.||.|++|.||+|      ..||+|++.....      .......+.+|+.+++.++|                 
T Consensus         1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~ik~~~~~~~------~~~~~~~~~~E~~~l~~l~~-----------------   57 (283)
T cd07835           1 YQKVEKIGEGTYGVVYKARDKLTGEIVALKKIRLETE------DEGVPSTAIREISLLKELNH-----------------   57 (283)
T ss_pred             CchheEecCCCCeEEEEEEEcCCCCEEEEEEeecccc------cccchhHHHHHHHHHHhcCC-----------------
Confidence            567899999999999999      7899999986531      12223457789999999998                 


Q ss_pred             ccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc-----cCCHHHHHHHHHHHHHHHHH
Q psy9184         337 CSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK-----YRSPNQTYAMILQVVFSLAV  411 (562)
Q Consensus       337 ~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~-----~l~e~~i~~I~~QIl~aL~y  411 (562)
                               ||++++++++.+             ++..|++|||+. +++...+.     .+++..+..++.||+.||.|
T Consensus        58 ---------~~iv~~~~~~~~-------------~~~~~iv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~  114 (283)
T cd07835          58 ---------PNIVRLLDVVHS-------------ENKLYLVFEFLD-LDLKKYMDSSPLTGLDPPLIKSYLYQLLQGIAY  114 (283)
T ss_pred             ---------CCccCHhheecc-------------CCeEEEEEeccC-cCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHH
Confidence                     999999998875             568999999995 55554442     37899999999999999999


Q ss_pred             HHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecC-----CcEEEeecCCCccccCC
Q psy9184         412 AEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVG-----EKICYYDLSQDEELFEG  486 (562)
Q Consensus       412 LH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~-----~g~v~~~l~~~pelF~g  486 (562)
                      ||+ .+++||||+|+||+++.++                    .++|+|||+++....     .....+..|++||.+.+
T Consensus       115 lH~-~~~~H~dl~p~nil~~~~~--------------------~~~l~df~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~  173 (283)
T cd07835         115 CHS-HRVLHRDLKPQNLLIDREG--------------------ALKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLG  173 (283)
T ss_pred             HHH-CCeeCCCCCHHHEEEcCCC--------------------cEEEeecccccccCCCccccCccccccCCCCCceeec
Confidence            999 7999999999999999876                    799999999976532     12233567899998765


Q ss_pred             C--CCcHHHHHHHhhcccCCCCCCCCCC
Q psy9184         487 E--GDYQFDMYRMMRKQCQNNWQNFTPK  512 (562)
Q Consensus       487 ~--~~~q~dIy~lm~~~~~~~W~~~~P~  512 (562)
                      .  ...+.|+|++. ......+.+..|+
T Consensus       174 ~~~~~~~~Di~slG-~~l~~l~~g~~pf  200 (283)
T cd07835         174 SRQYSTPVDIWSIG-CIFAEMVNRRPLF  200 (283)
T ss_pred             CcccCcHHHHHHHH-HHHHHHHhCCCCC
Confidence            4  35569998863 3332333344444

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc

>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7

Probab=99.86  E-value=2.3e-21  Score=197.87  Aligned_cols=231  Identities=19%  Similarity=0.178  Sum_probs=156.9

Q ss_pred             CCCCceeeeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCcccc
Q psy9184         260 SSALKNCKKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTE  333 (562)
Q Consensus       260 ~~~y~~~~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~  333 (562)
                      -++|++.+.||+|+||.||+|      ..||||+++...       .......+..|+.++..+..              
T Consensus        14 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~-------~~~~~~~~~~e~~~~~~~~~--------------   72 (296)
T cd06618          14 LNDLENLGEIGSGTCGQVYKMRFKKTGHVMAVKQMRRTG-------NKEENKRILMDLDVVLKSHD--------------   72 (296)
T ss_pred             cchheeeeEeeccCCeEEEEEEECCCCeEEEEEEEeccC-------ChHHHHHHHHHHHHHHhccC--------------
Confidence            367899999999999999999      789999998643       12233466778877776653              


Q ss_pred             cccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc----cCCHHHHHHHHHHHHHHH
Q psy9184         334 LLKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK----YRSPNQTYAMILQVVFSL  409 (562)
Q Consensus       334 l~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~----~l~e~~i~~I~~QIl~aL  409 (562)
                                 ||||+++++++.+             +..+|+||||+. +.+...+.    .+++..+..++.||+.||
T Consensus        73 -----------~~~i~~~~~~~~~-------------~~~~~~v~e~~~-~~l~~l~~~~~~~l~~~~~~~i~~~i~~~l  127 (296)
T cd06618          73 -----------CPYIVKCYGYFIT-------------DSDVFICMELMS-TCLDKLLKRIQGPIPEDILGKMTVAIVKAL  127 (296)
T ss_pred             -----------CCchHhhheeeec-------------CCeEEEEeeccC-cCHHHHHHHhcCCCCHHHHHHHHHHHHHHH
Confidence                       4999999998875             558999999985 33332222    378999999999999999


Q ss_pred             HHHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecCC----cEEEeecCCCccccC
Q psy9184         410 AVAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVGE----KICYYDLSQDEELFE  485 (562)
Q Consensus       410 ~yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~~----g~v~~~l~~~pelF~  485 (562)
                      +|||+.++|+||||+|+||+++.++                    .++|+|||++......    ....+..|++||.+.
T Consensus       128 ~~lH~~~~i~H~dl~p~nill~~~~--------------------~~kL~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~  187 (296)
T cd06618         128 HYLKEKHGVIHRDVKPSNILLDASG--------------------NVKLCDFGISGRLVDSKAKTRSAGCAAYMAPERID  187 (296)
T ss_pred             HHHHhhCCEecCCCcHHHEEEcCCC--------------------CEEECccccchhccCCCcccCCCCCccccCHhhcC
Confidence            9999746999999999999998775                    7999999999765431    122345678999887


Q ss_pred             CC-----CCcHHHHHHHhhcccCCCCCCCCCCChhhh-HHHHHHHHhhcccCCCCCCCchhHHHHHHHHHHHhcCCCcCc
Q psy9184         486 GE-----GDYQFDMYRMMRKQCQNNWQNFTPKNNVFW-IHYLVDKATCLKKGYQYLRAPRHQAFELLEELGQNALHFDSC  559 (562)
Q Consensus       486 g~-----~~~q~dIy~lm~~~~~~~W~~~~P~tn~~w-l~yl~~~Ll~~~~~~~~~~~~~~~~~~~l~~l~~~~l~~~s~  559 (562)
                      +.     .+...|||++ |..+...+.+..|+.+..- ...+...+.......+...    .....+.+|...+|..+..
T Consensus       188 ~~~~~~~~~~~~Di~sl-G~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~l~~li~~~l~~~p~  262 (296)
T cd06618         188 PPDPNPKYDIRADVWSL-GISLVELATGQFPYKNCKTEFEVLTKILQEEPPSLPPNE----GFSPDFCSFVDLCLTKDHR  262 (296)
T ss_pred             CCCCccccccchhHHHH-HHHHHHHHhCCCCCCcchhHHHHHHHHhcCCCCCCCCCC----CCCHHHHHHHHHHccCChh
Confidence            54     3456899886 3333344455555533110 1112222222011111110    1234677777888877665


Q ss_pred             CC
Q psy9184         560 YE  561 (562)
Q Consensus       560 ~~  561 (562)
                      .|
T Consensus       263 ~R  264 (296)
T cd06618         263 KR  264 (296)
T ss_pred             hC
Confidence            44

Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it

>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9

Probab=99.86  E-value=4.3e-21  Score=195.69  Aligned_cols=192  Identities=20%  Similarity=0.257  Sum_probs=141.6

Q ss_pred             CCCceeeeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCccccc
Q psy9184         261 SALKNCKKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTEL  334 (562)
Q Consensus       261 ~~y~~~~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~l  334 (562)
                      ++|++.++||+|+||.||+|      +.||||.+.....      .......+.+|+.+++.++|               
T Consensus        12 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~------~~~~~~~~~~e~~~l~~l~h---------------   70 (310)
T cd07865          12 SKYEKLAKIGQGTFGEVFKARHKKTKQIVALKKVLMENE------KEGFPITALREIKILQLLKH---------------   70 (310)
T ss_pred             hheEEEEEeecCCCEEEEEEEECCCCcEEEEEEEeccCC------cCCchhHHHHHHHHHHhCCC---------------
Confidence            67999999999999999999      7999999875431      11122345689999999998               


Q ss_pred             ccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc----cCCHHHHHHHHHHHHHHHH
Q psy9184         335 LKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK----YRSPNQTYAMILQVVFSLA  410 (562)
Q Consensus       335 ~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~----~l~e~~i~~I~~QIl~aL~  410 (562)
                                 |||+++++++.....     +........|+||||+.+ ++...+.    .+++.+++.++.||+.||.
T Consensus        71 -----------~~iv~~~~~~~~~~~-----~~~~~~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~i~~qi~~al~  133 (310)
T cd07865          71 -----------ENVVNLIEICRTKAT-----PYNRYKGSFYLVFEFCEH-DLAGLLSNKNVKFTLSEIKKVMKMLLNGLY  133 (310)
T ss_pred             -----------CCccceEEEEecccc-----cccCCCceEEEEEcCCCc-CHHHHHHhcccCCCHHHHHHHHHHHHHHHH
Confidence                       888888777654220     001123478999999964 4444433    4789999999999999999


Q ss_pred             HHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecCC---------cEEEeecCCCc
Q psy9184         411 VAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVGE---------KICYYDLSQDE  481 (562)
Q Consensus       411 yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~~---------g~v~~~l~~~p  481 (562)
                      |||+ .||+||||||+|||++.++                    .++|+|||++......         +.+.+..|++|
T Consensus       134 ~lH~-~~i~H~dl~p~nil~~~~~--------------------~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~y~aP  192 (310)
T cd07865         134 YIHR-NKILHRDMKAANILITKDG--------------------ILKLADFGLARAFSLSKNSKPNRYTNRVVTLWYRPP  192 (310)
T ss_pred             HHHH-CCeeccCCCHHHEEECCCC--------------------cEEECcCCCcccccCCcccCCCCccCcccCccccCc
Confidence            9999 7999999999999998876                    7999999999866431         22345568899


Q ss_pred             cccCCC--CCcHHHHHHHhhcccCCCCCCCCCC
Q psy9184         482 ELFEGE--GDYQFDMYRMMRKQCQNNWQNFTPK  512 (562)
Q Consensus       482 elF~g~--~~~q~dIy~lm~~~~~~~W~~~~P~  512 (562)
                      |.+.+.  .+...|||++. ......|.+..|+
T Consensus       193 E~~~~~~~~~~~~Di~slG-~~l~el~t~~~~~  224 (310)
T cd07865         193 ELLLGERDYGPPIDMWGAG-CIMAEMWTRSPIM  224 (310)
T ss_pred             HHhcCCcccCchhhhHHHH-HHHHHHHhCCCCC
Confidence            988764  34568998863 3333344444443

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl

>KOG1095|consensus

Probab=99.86  E-value=9.2e-22  Score=225.92  Aligned_cols=171  Identities=20%  Similarity=0.266  Sum_probs=141.4

Q ss_pred             CCCCCceeeeeeccCceEEEEE-----------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCC
Q psy9184         259 PSSALKNCKKIGEGVYGEVFKL-----------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENS  327 (562)
Q Consensus       259 ~~~~y~~~~~LG~GsfG~Vyka-----------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~  327 (562)
                      +....++...||+|+||+||.|           ..||+|.++...       +.....+|++|..+|+.++|        
T Consensus       690 ~~~~v~l~~~lG~G~FG~VY~g~~~~~~~~~~~~~vaiK~l~~~~-------~~~~~~~Fl~Ea~~m~~f~H--------  754 (1025)
T KOG1095|consen  690 PRKNVTLLRVLGKGAFGEVYEGTYSDVPGSVSPIQVAVKSLKRLS-------SEQEVSDFLKEALLMSKFDH--------  754 (1025)
T ss_pred             ChhheEeeeeeccccccceEEEEEecCCCCccceEEEEEeccccC-------CHHHHHHHHHHHHHHhcCCC--------
Confidence            4567788999999999999999           348899888653       45667899999999999999        


Q ss_pred             CCcccccccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCcccccc----------CCHHH
Q psy9184         328 TPCFTELLKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIKY----------RSPNQ  397 (562)
Q Consensus       328 ~p~fv~l~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~~----------l~e~~  397 (562)
                                        ||||++.++..+             ....+|++|||.||+|+..+..          ++..+
T Consensus       755 ------------------pNiv~liGv~l~-------------~~~~~i~leyM~gGDL~sflr~~r~~~~~~~~L~~~d  803 (1025)
T KOG1095|consen  755 ------------------PNIVSLIGVCLD-------------SGPPLILLEYMEGGDLLSFLRESRPAPFQPSNLSMRD  803 (1025)
T ss_pred             ------------------cceeeEEEeecC-------------CCCcEEEehhcccCcHHHHHHhcccccCCCCCCCHHH
Confidence                              888888877754             4578999999999999887752          78899


Q ss_pred             HHHHHHHHHHHHHHHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecC------Cc
Q psy9184         398 TYAMILQVVFSLAVAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVG------EK  471 (562)
Q Consensus       398 i~~I~~QIl~aL~yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~------~g  471 (562)
                      ...++.||+.|+.|||+ +++|||||-..|+|++...                    .|||+||||||.+..      .+
T Consensus       804 Ll~~a~dvA~G~~YLe~-~~fvHRDLAaRNCLL~~~r--------------------~VKIaDFGlArDiy~~~yyr~~~  862 (1025)
T KOG1095|consen  804 LLAFALDVAKGMNYLES-KHFVHRDLAARNCLLDERR--------------------VVKIADFGLARDIYDKDYYRKHG  862 (1025)
T ss_pred             HHHHHHHHhhhhHHHHh-CCCcCcchhhhheeecccC--------------------cEEEcccchhHhhhhchheeccC
Confidence            99999999999999999 7999999999999999985                    799999999995443      33


Q ss_pred             E-EEeecCCCccccC-CCCCcHHHHHH
Q psy9184         472 I-CYYDLSQDEELFE-GEGDYQFDMYR  496 (562)
Q Consensus       472 ~-v~~~l~~~pelF~-g~~~~q~dIy~  496 (562)
                      . ..---||+||.|. +.-..+.|||+
T Consensus       863 ~a~lPvkWm~PEsl~d~iFtskSDvWs  889 (1025)
T KOG1095|consen  863 EAMLPVKWMPPESLKDGIFTSKSDVWS  889 (1025)
T ss_pred             ccccceecCCHHHHhhcccccccchhh
Confidence            3 3334589999887 55566667765

>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase

Probab=99.86  E-value=5.3e-21  Score=188.04  Aligned_cols=230  Identities=17%  Similarity=0.170  Sum_probs=165.0

Q ss_pred             CCceeeeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCcccccc
Q psy9184         262 ALKNCKKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTELL  335 (562)
Q Consensus       262 ~y~~~~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~l~  335 (562)
                      +|...+.||+|+||.||+|      ..+++|++.....      .....+.+.+|+.++++++|                
T Consensus         1 ~~~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~------~~~~~~~~~~e~~~l~~l~~----------------   58 (260)
T cd06606           1 EWTRGELLGRGSFGSVYLALDKDTGELMAVKSVELSGD------SEEELEALEREIRILSSLQH----------------   58 (260)
T ss_pred             CceeeeEeeecCceEEEEEEECCCCcEEEEEEeecccc------chHHHHHHHHHHHHHHHcCC----------------
Confidence            4778899999999999999      6899999886531      13456788999999999998                


Q ss_pred             cccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc---cCCHHHHHHHHHHHHHHHHHH
Q psy9184         336 KCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK---YRSPNQTYAMILQVVFSLAVA  412 (562)
Q Consensus       336 ~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~---~l~e~~i~~I~~QIl~aL~yL  412 (562)
                                |||+++++.+....           ....+++||++.++++.+.+.   .+++.++..++.|++.||.||
T Consensus        59 ----------~~i~~~~~~~~~~~-----------~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~l~~l  117 (260)
T cd06606          59 ----------PNIVRYYGSERDEE-----------KNTLNIFLEYVSGGSLSSLLKKFGKLPEPVIRKYTRQILEGLAYL  117 (260)
T ss_pred             ----------CCEeeEEEEEecCC-----------CCeEEEEEEecCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHH
Confidence                      99999998886521           258999999999887765553   478999999999999999999


Q ss_pred             HhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecCCc-------EEEeecCCCccccC
Q psy9184         413 EVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVGEK-------ICYYDLSQDEELFE  485 (562)
Q Consensus       413 H~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~~g-------~v~~~l~~~pelF~  485 (562)
                      |+ .+++|+||+|+||+++.++                    .++|+|||.+.......       ......|.+||.+.
T Consensus       118 h~-~~~~h~dl~p~ni~i~~~~--------------------~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~  176 (260)
T cd06606         118 HS-NGIVHRDIKGANILVDSDG--------------------VVKLADFGCAKRLGDIETGEGTGSVRGTPYWMAPEVIR  176 (260)
T ss_pred             HH-CCccccCCCHHHEEEcCCC--------------------CEEEcccccEEecccccccccccCCCCCccccCHhhhc
Confidence            99 7999999999999999876                    79999999998876533       23355678899877


Q ss_pred             CC-CCcHHHHHHHhhcccCCCCCCCCCCChhh-hHHHHHHHHhhcccCCCCCCCchhHHHHHHHHHHHhcCCCcCcCC
Q psy9184         486 GE-GDYQFDMYRMMRKQCQNNWQNFTPKNNVF-WIHYLVDKATCLKKGYQYLRAPRHQAFELLEELGQNALHFDSCYE  561 (562)
Q Consensus       486 g~-~~~q~dIy~lm~~~~~~~W~~~~P~tn~~-wl~yl~~~Ll~~~~~~~~~~~~~~~~~~~l~~l~~~~l~~~s~~~  561 (562)
                      +. .....|+|++.... ...+.+..|+.... ....+.. +.. .........   ..-..+.+|...++..+...|
T Consensus       177 ~~~~~~~~Dv~slG~il-~~l~~g~~p~~~~~~~~~~~~~-~~~-~~~~~~~~~---~~~~~l~~~i~~~l~~~p~~R  248 (260)
T cd06606         177 GEEYGRAADIWSLGCTV-IEMATGKPPWSELGNPMAALYK-IGS-SGEPPEIPE---HLSEEAKDFLRKCLRRDPKKR  248 (260)
T ss_pred             CCCCCchhhHHHHHHHH-HHHHhCCCCCCCCCchHHHHHh-ccc-cCCCcCCCc---ccCHHHHHHHHHhCcCChhhC
Confidence            64 56668998754333 23333444442221 1111111 111 011111111   114577788888888776655

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK

>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity

Probab=99.86  E-value=1.1e-21  Score=197.10  Aligned_cols=223  Identities=20%  Similarity=0.225  Sum_probs=156.7

Q ss_pred             ceeeeeeccCceEEEEE----------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCcccc
Q psy9184         264 KNCKKIGEGVYGEVFKL----------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTE  333 (562)
Q Consensus       264 ~~~~~LG~GsfG~Vyka----------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~  333 (562)
                      .+.+.||.|+||.||+|          ..|+||++....       .....+.+.+|+.+++.++|              
T Consensus         2 ~~~~~ig~G~fg~v~~~~~~~~~~~~~~~V~vk~~~~~~-------~~~~~~~~~~e~~~l~~l~h--------------   60 (259)
T PF07714_consen    2 KLIKQIGEGSFGKVYRAEWKQKDNDKNQPVAVKILKPSS-------SEEEEEEFLNEIQILRKLRH--------------   60 (259)
T ss_dssp             EEEEEEEEESSEEEEEEEEESTTTSSEEEEEEEEESTTS-------SHHHHHHHHHHHHHHHTHSB--------------
T ss_pred             EEeeEEccCCCcEEEEEEEEcccCCCCEEEEEEEecccc-------ccccceeeeecccccccccc--------------
Confidence            35689999999999998          578999996432       23346788999999999987              


Q ss_pred             cccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc-----cCCHHHHHHHHHHHHHH
Q psy9184         334 LLKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK-----YRSPNQTYAMILQVVFS  408 (562)
Q Consensus       334 l~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~-----~l~e~~i~~I~~QIl~a  408 (562)
                                  |||+++++++..             .+..++|||||++|++.+.+.     .+++.++..|+.||+.|
T Consensus        61 ------------~ni~~~~g~~~~-------------~~~~~lv~e~~~~g~L~~~L~~~~~~~~~~~~~~~i~~~i~~~  115 (259)
T PF07714_consen   61 ------------PNIVKLYGFCIE-------------NEPLFLVMEYCPGGSLDDYLKSKNKEPLSEQQRLSIAIQIAEA  115 (259)
T ss_dssp             ------------TTBE-EEEEEES-------------SSSEEEEEE--TTEBHHHHHHHTCTTTSBHHHHHHHHHHHHHH
T ss_pred             ------------cccccccccccc-------------ccccccccccccccccccccccccccccccccccccccccccc
Confidence                        999999998874             446999999999998866553     38899999999999999


Q ss_pred             HHHHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecC-------CcEEEeecCCCc
Q psy9184         409 LAVAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVG-------EKICYYDLSQDE  481 (562)
Q Consensus       409 L~yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~-------~g~v~~~l~~~p  481 (562)
                      |.|||+ .+|+|+||++.|||++.++                    .+||+|||+++....       ........|.+|
T Consensus       116 l~~Lh~-~~iiH~~l~~~nill~~~~--------------------~~Kl~~f~~~~~~~~~~~~~~~~~~~~~~~~~aP  174 (259)
T PF07714_consen  116 LSYLHS-NNIIHGNLSPSNILLDSNG--------------------QVKLSDFGLSRPISEKSKYKNDSSQQLPLRYLAP  174 (259)
T ss_dssp             HHHHHH-TTEEEST-SGGGEEEETTT--------------------EEEEESTTTGEETTTSSSEEESTTSESGGGGS-H
T ss_pred             cccccc-ccccccccccccccccccc--------------------cccccccccccccccccccccccccccccccccc
Confidence            999999 6999999999999999986                    899999999988732       223334456788


Q ss_pred             cccCCC-CCcHHHHHHHhhcccCCCCC-CCCCCChhhhHHHHHHHHhhcccCCCCCCCchhHHHHHHHHHHHhcCCCcCc
Q psy9184         482 ELFEGE-GDYQFDMYRMMRKQCQNNWQ-NFTPKNNVFWIHYLVDKATCLKKGYQYLRAPRHQAFELLEELGQNALHFDSC  559 (562)
Q Consensus       482 elF~g~-~~~q~dIy~lm~~~~~~~W~-~~~P~tn~~wl~yl~~~Ll~~~~~~~~~~~~~~~~~~~l~~l~~~~l~~~s~  559 (562)
                      |.+.+. .+...|||+..-... +.|. +..|+.+. ....+..++.. ...++.+..    .-..+.++...++..+..
T Consensus       175 E~~~~~~~~~ksDVysfG~~l~-ei~~~~~~p~~~~-~~~~~~~~~~~-~~~~~~~~~----~~~~~~~li~~C~~~~p~  247 (259)
T PF07714_consen  175 EVLKDGEYTKKSDVYSFGMLLY-EILTLGKFPFSDY-DNEEIIEKLKQ-GQRLPIPDN----CPKDIYSLIQQCWSHDPE  247 (259)
T ss_dssp             HHHHHSEESHHHHHHHHHHHHH-HHHTTSSGTTTTS-CHHHHHHHHHT-TEETTSBTT----SBHHHHHHHHHHT-SSGG
T ss_pred             cccccccccccccccccccccc-ccccccccccccc-ccccccccccc-cccceeccc----hhHHHHHHHHHHcCCChh
Confidence            887654 566799988544433 3333 44555444 24444555544 222222211    123455666777666554


Q ss_pred             C
Q psy9184         560 Y  560 (562)
Q Consensus       560 ~  560 (562)
                      .
T Consensus       248 ~  248 (259)
T PF07714_consen  248 K  248 (259)
T ss_dssp             G
T ss_pred             h
Confidence            4

Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....

>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase

Probab=99.86  E-value=1.6e-21  Score=222.35  Aligned_cols=144  Identities=17%  Similarity=0.305  Sum_probs=124.2

Q ss_pred             CCCceeeeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCccccc
Q psy9184         261 SALKNCKKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTEL  334 (562)
Q Consensus       261 ~~y~~~~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~l  334 (562)
                      ++|.+.++||+|+||.||+|      +.||||++....     .........+..|+.+++.++|               
T Consensus         4 ~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiKvi~~~~-----~~~~~~~~~~~~E~~~l~~l~h---------------   63 (669)
T cd05610           4 EEFVIVKPISRGAFGKVYLGRKKNNSKLYAVKVVKKAD-----MINKNMVHQVQAERDALALSKS---------------   63 (669)
T ss_pred             CCEEEEEEEecCCCeEEEEEEECCCCcEEEEEEEehhh-----ccCHHHHHHHHHHHHHHHhcCC---------------
Confidence            57899999999999999999      789999998643     2233445678899999999998               


Q ss_pred             ccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc---cCCHHHHHHHHHHHHHHHHH
Q psy9184         335 LKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK---YRSPNQTYAMILQVVFSLAV  411 (562)
Q Consensus       335 ~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~---~l~e~~i~~I~~QIl~aL~y  411 (562)
                                 |||+++++.+..             .+.+|+||||+.||++...+.   .+++..++.|+.||+.||.|
T Consensus        64 -----------p~Iv~~~~~~~~-------------~~~~~lVmEy~~g~~L~~li~~~~~l~~~~~~~i~~qil~aL~y  119 (669)
T cd05610          64 -----------PFIVHLYYSLQS-------------ANNVYLVMEYLIGGDVKSLLHIYGYFDEEMAVKYISEVALALDY  119 (669)
T ss_pred             -----------CCcCeEEEEEEE-------------CCEEEEEEeCCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHH
Confidence                       999999988765             558999999999998766553   47899999999999999999


Q ss_pred             HHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecC
Q psy9184         412 AEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVG  469 (562)
Q Consensus       412 LH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~  469 (562)
                      ||. ++|+||||||+|||++.++                    .++|+|||+++....
T Consensus       120 LH~-~gIiHrDLKP~NILl~~~g--------------------~vkL~DFGls~~~~~  156 (669)
T cd05610         120 LHR-HGIIHRDLKPDNMLISNEG--------------------HIKLTDFGLSKVTLN  156 (669)
T ss_pred             HHh-CCEEeCCccHHHEEEcCCC--------------------CEEEEeCCCCccccC
Confidence            999 7999999999999998876                    799999999997653

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481

>KOG0695|consensus

Probab=99.86  E-value=1.6e-21  Score=197.19  Aligned_cols=225  Identities=18%  Similarity=0.233  Sum_probs=167.3

Q ss_pred             CCCCCceeeeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCccc
Q psy9184         259 PSSALKNCKKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFT  332 (562)
Q Consensus       259 ~~~~y~~~~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv  332 (562)
                      .-.+|.++++||+|+|+.|.++      +.||+|+++++-.     .+......+..|-.+....++             
T Consensus       248 ~l~df~ll~vigrgsyakvl~~~~~~t~qiyamkvvkkel~-----nddedidwvqtek~vfe~asn-------------  309 (593)
T KOG0695|consen  248 GLQDFDLLRVIGRGSYAKVLLVRLKKTDQIYAMKVVKKELV-----NDDEDIDWVQTEKHVFEQASN-------------  309 (593)
T ss_pred             ccccceeeeeecCcchhhhhheehcccceeeehhhHHHHhc-----CCcccchhHHhhHHHHHhccC-------------
Confidence            3468999999999999999999      8999999998642     123334556677777777666             


Q ss_pred             ccccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc---cCCHHHHHHHHHHHHHHH
Q psy9184         333 ELLKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK---YRSPNQTYAMILQVVFSL  409 (562)
Q Consensus       333 ~l~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~---~l~e~~i~~I~~QIl~aL  409 (562)
                                  ||++|.++..|++             +..+|+|.||++||+++.+++   +++++.++.+...|+.||
T Consensus       310 ------------~pflvglhscfqt-------------esrlffvieyv~ggdlmfhmqrqrklpeeharfys~ei~lal  364 (593)
T KOG0695|consen  310 ------------NPFLVGLHSCFQT-------------ESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEICLAL  364 (593)
T ss_pred             ------------CCeEEehhhhhcc-------------cceEEEEEEEecCcceeeehhhhhcCcHHHhhhhhHHHHHHH
Confidence                        6999999999986             669999999999999988886   499999999999999999


Q ss_pred             HHHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecCC-----cEEEeecCCCcccc
Q psy9184         410 AVAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVGE-----KICYYDLSQDEELF  484 (562)
Q Consensus       410 ~yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~~-----g~v~~~l~~~pelF  484 (562)
                      .|||+ .|||.||||.+|+|++..|                    ++||+|+|+++.-...     ..++++-|.+||++
T Consensus       365 ~flh~-rgiiyrdlkldnvlldaeg--------------------hikltdygmcke~l~~gd~tstfcgtpnyiapeil  423 (593)
T KOG0695|consen  365 NFLHE-RGIIYRDLKLDNVLLDAEG--------------------HIKLTDYGMCKEGLGPGDTTSTFCGTPNYIAPEIL  423 (593)
T ss_pred             HHHhh-cCeeeeeccccceEEccCC--------------------ceeecccchhhcCCCCCcccccccCCCcccchhhh
Confidence            99999 7999999999999999998                    8999999999875542     34568899999999


Q ss_pred             CCC-CCcHHHHHHHhhcccCCCCCCCCCCC-------hhhhHHHHHHHHhhcccCCCCCCCchhHHHHHHHHHH
Q psy9184         485 EGE-GDYQFDMYRMMRKQCQNNWQNFTPKN-------NVFWIHYLVDKATCLKKGYQYLRAPRHQAFELLEELG  550 (562)
Q Consensus       485 ~g~-~~~q~dIy~lm~~~~~~~W~~~~P~t-------n~~wl~yl~~~Ll~~~~~~~~~~~~~~~~~~~l~~l~  550 (562)
                      .|. +....| |+.+|...-++..+.+|+.       +..--.|+-+-.|.  +...-+++...+.--.|+-|.
T Consensus       424 rgeeygfsvd-wwalgvlmfemmagrspfdivgm~n~d~ntedylfqvile--kqiriprslsvkas~vlkgfl  494 (593)
T KOG0695|consen  424 RGEEYGFSVD-WWALGVLMFEMMAGRSPFDIVGMDNPDMNTEDYLFQVILE--KQIRIPRSLSVKASHVLKGFL  494 (593)
T ss_pred             cccccCceeh-HHHHHHHHHHHHcCCCCcceecCCCcccchhHHHHHHHhh--hcccccceeehhhHHHHHHhh
Confidence            985 333334 3444444444444444441       11224566666666  333334443334333344333

>KOG1006|consensus

Probab=99.86  E-value=1.9e-22  Score=198.95  Aligned_cols=175  Identities=21%  Similarity=0.272  Sum_probs=142.4

Q ss_pred             CCCCCCceeeeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCcc
Q psy9184         258 YPSSALKNCKKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCF  331 (562)
Q Consensus       258 ~~~~~y~~~~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~f  331 (562)
                      |..++.+.+..||.|+||.|++-      +..|||.|....       ..+...+++.|.....+-+.            
T Consensus        61 F~~~~Lqdlg~iG~G~fG~V~KM~hk~sg~~mAVKrIr~~n-------~~keq~rll~e~d~~mks~~------------  121 (361)
T KOG1006|consen   61 FTSDNLQDLGEIGNGAFGTVNKMLHKPSGKLMAVKRIRSNN-------IEKEQKRLLMEHDTVMKSSN------------  121 (361)
T ss_pred             cccchHHHHHHhcCCcchhhhhhhcCccCcEEEEEEeeecc-------chHHHHHHHHHHHHHHhhcC------------
Confidence            34577888899999999999998      899999999764       24555788999998877766            


Q ss_pred             cccccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc---------cCCHHHHHHHH
Q psy9184         332 TELLKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK---------YRSPNQTYAMI  402 (562)
Q Consensus       332 v~l~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~---------~l~e~~i~~I~  402 (562)
                                   +|+||++|+..-             .++..||+||+|+  ..++.+=         .++|..+-.|.
T Consensus       122 -------------cp~IVkfyGa~F-------------~EGdcWiCMELMd--~SlDklYk~vy~vq~~~ipE~Ilg~It  173 (361)
T KOG1006|consen  122 -------------CPNIVKFYGALF-------------SEGDCWICMELMD--ISLDKLYKRVYSVQKSRIPENILGHIT  173 (361)
T ss_pred             -------------CcHHHHHhhhhh-------------cCCceeeeHHHHh--hhHHHHHHHHHHHHhccCcHhhhhhee
Confidence                         588888887654             4778999999995  4455441         38999999999


Q ss_pred             HHHHHHHHHHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecC-------CcEEEe
Q psy9184         403 LQVVFSLAVAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVG-------EKICYY  475 (562)
Q Consensus       403 ~QIl~aL~yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~-------~g~v~~  475 (562)
                      .-.+.||.||.+++.|||||+||+|||++..|                    .+||||||++..+.+       .||   
T Consensus       174 vatV~AL~yLK~~lkiIHRDvKPSNILldr~G--------------------~vKLCDFGIcGqLv~SiAkT~daGC---  230 (361)
T KOG1006|consen  174 VATVDALDYLKEELKIIHRDVKPSNILLDRHG--------------------DVKLCDFGICGQLVDSIAKTVDAGC---  230 (361)
T ss_pred             eeehhHHHHHHHHhhhhhccCChhheEEecCC--------------------CEeeecccchHhHHHHHHhhhccCC---
Confidence            99999999999989999999999999999998                    699999999987654       455   


Q ss_pred             ecCCCccccCCC---CCcHHHHHHHhhccc
Q psy9184         476 DLSQDEELFEGE---GDYQFDMYRMMRKQC  502 (562)
Q Consensus       476 ~l~~~pelF~g~---~~~q~dIy~lm~~~~  502 (562)
                      ..|++||-....   ++..+|+|++.-+..
T Consensus       231 rpYmAPERi~p~~~gyDiRSDvWSLGITL~  260 (361)
T KOG1006|consen  231 RPYMAPERIDPSDKGYDIRSDVWSLGITLY  260 (361)
T ss_pred             ccccChhccCCccCCcchhhhhhhhcceEe
Confidence            457899987764   456699988755544

>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase

Probab=99.86  E-value=2.4e-21  Score=203.13  Aligned_cols=191  Identities=17%  Similarity=0.239  Sum_probs=142.1

Q ss_pred             CCCCceeeeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCcccc
Q psy9184         260 SSALKNCKKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTE  333 (562)
Q Consensus       260 ~~~y~~~~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~  333 (562)
                      .++|.+.+.||+|+||.||+|      +.||+|++....      ......+.+.+|+.+++.++|              
T Consensus        16 ~~~y~~~~~lg~G~~g~v~~~~~~~~~~~vaiK~~~~~~------~~~~~~~~~~~Ei~~l~~l~h--------------   75 (345)
T cd07877          16 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPF------QSIIHAKRTYRELRLLKHMKH--------------   75 (345)
T ss_pred             cCceEEEEEeeecCCeEEEEEEEcCCCeEEEEEEecCcc------hhhHHHHHHHHHHHHHHHcCC--------------
Confidence            478999999999999999999      789999987542      112234567889999999998              


Q ss_pred             cccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCcccc--ccCCHHHHHHHHHHHHHHHHH
Q psy9184         334 LLKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDI--KYRSPNQTYAMILQVVFSLAV  411 (562)
Q Consensus       334 l~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l--~~l~e~~i~~I~~QIl~aL~y  411 (562)
                                  |||+++++.+....       ........|++++++ |+++...+  ..+++..++.++.||+.||+|
T Consensus        76 ------------~~iv~~~~~~~~~~-------~~~~~~~~~lv~~~~-~~~L~~~~~~~~l~~~~~~~i~~qi~~aL~~  135 (345)
T cd07877          76 ------------ENVIGLLDVFTPAR-------SLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHVQFLIYQILRGLKY  135 (345)
T ss_pred             ------------Ccccceeeeeeecc-------cccccccEEEEehhc-ccCHHHHHhcCCCCHHHHHHHHHHHHHHHHH
Confidence                        89999888775421       001224578999987 45443332  248899999999999999999


Q ss_pred             HHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecCC--cEEEeecCCCccccCCC--
Q psy9184         412 AEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVGE--KICYYDLSQDEELFEGE--  487 (562)
Q Consensus       412 LH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~~--g~v~~~l~~~pelF~g~--  487 (562)
                      ||+ .||+||||||+||+++.++                    .++|+|||+++.....  ....+..|++||.+.+.  
T Consensus       136 LH~-~~ivH~dlkp~NIll~~~~--------------------~~kl~dfg~~~~~~~~~~~~~~~~~y~aPE~~~~~~~  194 (345)
T cd07877         136 IHS-ADIIHRDLKPSNLAVNEDC--------------------ELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMH  194 (345)
T ss_pred             HHH-CCeeecCCChHHEEEcCCC--------------------CEEEecccccccccccccccccCCCccCHHHHhCccC
Confidence            999 7999999999999999886                    7999999999876542  23345678899987663  


Q ss_pred             CCcHHHHHHHhhcccCCCCCCCCCC
Q psy9184         488 GDYQFDMYRMMRKQCQNNWQNFTPK  512 (562)
Q Consensus       488 ~~~q~dIy~lm~~~~~~~W~~~~P~  512 (562)
                      .+...|||++.-.. ...+.+..|+
T Consensus       195 ~~~~~DvwslG~il-~el~~g~~pf  218 (345)
T cd07877         195 YNQTVDIWSVGCIM-AELLTGRTLF  218 (345)
T ss_pred             CCchhhHHHHHHHH-HHHHhCCCCC
Confidence            34458998864332 2333444444

Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14

>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase

Probab=99.86  E-value=6.1e-21  Score=199.66  Aligned_cols=191  Identities=16%  Similarity=0.193  Sum_probs=143.1

Q ss_pred             CCCceeeeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCccccc
Q psy9184         261 SALKNCKKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTEL  334 (562)
Q Consensus       261 ~~y~~~~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~l  334 (562)
                      .+|...+.||+|+||.||+|      +.||+|++.....      .......+.+|+.+++.+.|               
T Consensus        15 ~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~------~~~~~~~~~~e~~~l~~l~h---------------   73 (342)
T cd07879          15 ERYTSLKQVGSGAYGSVCSAIDKRTGEKVAIKKLSRPFQ------SEIFAKRAYRELTLLKHMQH---------------   73 (342)
T ss_pred             cceEEEEEeeecCCeEEEEEEeCCCCcEEEEEEecCccc------cccchhHHHHHHHHHHhcCC---------------
Confidence            57899999999999999999      7899999875421      12223467899999999998               


Q ss_pred             ccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc-cCCHHHHHHHHHHHHHHHHHHH
Q psy9184         335 LKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK-YRSPNQTYAMILQVVFSLAVAE  413 (562)
Q Consensus       335 ~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~-~l~e~~i~~I~~QIl~aL~yLH  413 (562)
                                 |||++++++|....       ........|+||||+.. .+..... .+++..+..++.|++.||+|||
T Consensus        74 -----------~niv~~~~~~~~~~-------~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~qi~~aL~~LH  134 (342)
T cd07879          74 -----------ENVIGLLDVFTSAV-------SGDEFQDFYLVMPYMQT-DLQKIMGHPLSEDKVQYLVYQMLCGLKYIH  134 (342)
T ss_pred             -----------CCccchhheecccc-------cCCCCceEEEEeccccc-CHHHHHcCCCCHHHHHHHHHHHHHHHHHHH
Confidence                       99999988876421       11123467999999963 2322222 4899999999999999999999


Q ss_pred             hhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecC--CcEEEeecCCCccccCCC--CC
Q psy9184         414 VELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVG--EKICYYDLSQDEELFEGE--GD  489 (562)
Q Consensus       414 ~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~--~g~v~~~l~~~pelF~g~--~~  489 (562)
                      + .+|+||||||+|||++.++                    .++|+|||+++....  .+...+..|++||.+.+.  .+
T Consensus       135 ~-~~i~H~dlkp~NIll~~~~--------------------~~kL~dfg~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~  193 (342)
T cd07879         135 S-AGIIHRDLKPGNLAVNEDC--------------------ELKILDFGLARHADAEMTGYVVTRWYRAPEVILNWMHYN  193 (342)
T ss_pred             H-CCcccCCCCHHHEEECCCC--------------------CEEEeeCCCCcCCCCCCCCceeeecccChhhhcCccccC
Confidence            9 7999999999999999876                    799999999986543  233456778999987653  45


Q ss_pred             cHHHHHHHhhcccCCCCCCCCCCC
Q psy9184         490 YQFDMYRMMRKQCQNNWQNFTPKN  513 (562)
Q Consensus       490 ~q~dIy~lm~~~~~~~W~~~~P~t  513 (562)
                      .+.|+|++ |......+.+..|+.
T Consensus       194 ~~~Dv~sl-Gvil~el~~g~~pf~  216 (342)
T cd07879         194 QTVDIWSV-GCIMAEMLTGKTLFK  216 (342)
T ss_pred             chHHHHHH-HHHHHHHHhCCCCCC
Confidence            56999886 333333444444543

Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13

>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6

Probab=99.86  E-value=2.1e-21  Score=203.17  Aligned_cols=197  Identities=17%  Similarity=0.219  Sum_probs=143.2

Q ss_pred             CCCCceeeeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCcccc
Q psy9184         260 SSALKNCKKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTE  333 (562)
Q Consensus       260 ~~~y~~~~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~  333 (562)
                      ..+|.+.+.||.|+||.||+|      ..||+|.+....        ....+.+.+|+.+++.++|              
T Consensus         4 ~~~y~~~~~Lg~g~~g~vy~~~~~~~~~~v~iK~i~~~~--------~~~~~~~~~Ei~~l~~l~h--------------   61 (342)
T cd07854           4 GSRYMDLRPLGCGSNGLVFSAVDSDCDKRVAVKKIVLTD--------PQSVKHALREIKIIRRLDH--------------   61 (342)
T ss_pred             CcceEEEEEecCCCCEEEEEEEECCCCcEEEEEEEecCC--------CchHHHHHHHHHHHHhcCC--------------
Confidence            368999999999999999999      789999987653        1334677899999999998              


Q ss_pred             cccccccCCCCCCCceeehhhhhccccCC-CCCCCCCCCCeEEEEEEecCCCCCccccc--cCCHHHHHHHHHHHHHHHH
Q psy9184         334 LLKCSCVRGRYPDRLVTLWEEFAKTKKSY-NDHPSMFEEDQIFIILELKNGGNDSGDIK--YRSPNQTYAMILQVVFSLA  410 (562)
Q Consensus       334 l~~~~iv~g~~~pnIv~l~~~f~~~~~s~-~~~p~~~~~~~l~LVmE~~~gG~ll~~l~--~l~e~~i~~I~~QIl~aL~  410 (562)
                                  |||+++++.+....... .+..........|+||||+. +++...+.  .+++..++.++.||+.||.
T Consensus        62 ------------~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~~~~~~l~~~~~~~~~~qi~~aL~  128 (342)
T cd07854          62 ------------DNIVKVYEVLGPSGSDLTEDVGSLTELNSVYIVQEYME-TDLANVLEQGPLSEEHARLFMYQLLRGLK  128 (342)
T ss_pred             ------------CcchhhHhhhcccccccccccccccccceEEEEeeccc-ccHHHHHHcCCCCHHHHHHHHHHHHHHHH
Confidence                        88888888776532100 00011222346899999997 44444332  4889999999999999999


Q ss_pred             HHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecCC--------cEEEeecCCCcc
Q psy9184         411 VAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVGE--------KICYYDLSQDEE  482 (562)
Q Consensus       411 yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~~--------g~v~~~l~~~pe  482 (562)
                      |||+ .||+||||||+||+++..+.                   .++|+|||+++.....        ....+..|.+||
T Consensus       129 ~LH~-~givH~dikp~Nili~~~~~-------------------~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE  188 (342)
T cd07854         129 YIHS-ANVLHRDLKPANVFINTEDL-------------------VLKIGDFGLARIVDPHYSHKGYLSEGLVTKWYRSPR  188 (342)
T ss_pred             HHHh-CCcccCCCCHHHEEEcCCCc-------------------eEEECCcccceecCCccccccccccccccccccCHH
Confidence            9999 79999999999999986542                   6899999999865321        123455688999


Q ss_pred             ccCC--CCCcHHHHHHHhhcccCCCCCCCCCC
Q psy9184         483 LFEG--EGDYQFDMYRMMRKQCQNNWQNFTPK  512 (562)
Q Consensus       483 lF~g--~~~~q~dIy~lm~~~~~~~W~~~~P~  512 (562)
                      .+.+  ....+.|||++.-. ....+.+..|+
T Consensus       189 ~~~~~~~~~~~~DiwSlGvi-l~el~~g~~pf  219 (342)
T cd07854         189 LLLSPNNYTKAIDMWAAGCI-FAEMLTGKPLF  219 (342)
T ss_pred             HHhCccccCchhhHHHHHHH-HHHHHhCCCCC
Confidence            7654  23446899886433 32333444444

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi

>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases

Probab=99.86  E-value=2.1e-21  Score=202.39  Aligned_cols=176  Identities=20%  Similarity=0.238  Sum_probs=138.3

Q ss_pred             CCCCceeeeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCcccc
Q psy9184         260 SSALKNCKKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTE  333 (562)
Q Consensus       260 ~~~y~~~~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~  333 (562)
                      .++|++.+.||+|+||.||+|      +.||+|++....       .......+.+|+.+++.++|              
T Consensus         4 ~~~y~i~~~lg~G~~g~vy~~~~~~~~~~vaiK~~~~~~-------~~~~~~~~~~E~~~l~~l~h--------------   62 (336)
T cd07849           4 GPRYQNLSYIGEGAYGMVCSATHKPTGVKVAIKKISPFE-------HQTFCQRTLREIKILRRFKH--------------   62 (336)
T ss_pred             ccceEEEEEEEecCCeEEEEEEEcCCCCeEEEEEecccc-------cchhHHHHHHHHHHHHhCCC--------------
Confidence            367999999999999999999      789999986422       12334567889999999998              


Q ss_pred             cccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc--cCCHHHHHHHHHHHHHHHHH
Q psy9184         334 LLKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK--YRSPNQTYAMILQVVFSLAV  411 (562)
Q Consensus       334 l~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~--~l~e~~i~~I~~QIl~aL~y  411 (562)
                                  |||+++++++....        ......+|++|||+.+ ++...+.  .+++..++.++.||+.||.|
T Consensus        63 ------------~niv~~~~~~~~~~--------~~~~~~~~lv~e~~~~-~l~~~~~~~~l~~~~~~~i~~ql~~aL~~  121 (336)
T cd07849          63 ------------ENIIGILDIIRPPS--------FESFNDVYIVQELMET-DLYKLIKTQHLSNDHIQYFLYQILRGLKY  121 (336)
T ss_pred             ------------CCcCchhheeeccc--------ccccceEEEEehhccc-CHHHHHhcCCCCHHHHHHHHHHHHHHHHH
Confidence                        89999988765421        1123468999999974 4544443  48999999999999999999


Q ss_pred             HHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecCC--------cEEEeecCCCccc
Q psy9184         412 AEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVGE--------KICYYDLSQDEEL  483 (562)
Q Consensus       412 LH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~~--------g~v~~~l~~~pel  483 (562)
                      ||+ .||+||||||+|||++.++                    .++|+|||+++.....        ..+.+..|++||.
T Consensus       122 LH~-~~ivH~dlkp~Nill~~~~--------------------~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~  180 (336)
T cd07849         122 IHS-ANVLHRDLKPSNLLLNTNC--------------------DLKICDFGLARIADPEHDHTGFLTEYVATRWYRAPEI  180 (336)
T ss_pred             HHh-CCeeccCCCHHHEEECCCC--------------------CEEECcccceeeccccccccCCcCCcCcCCCccChHH
Confidence            999 7999999999999999886                    7999999999876431        2344667899997


Q ss_pred             cCC--CCCcHHHHHHHh
Q psy9184         484 FEG--EGDYQFDMYRMM  498 (562)
Q Consensus       484 F~g--~~~~q~dIy~lm  498 (562)
                      +.+  ....+.|||++.
T Consensus       181 ~~~~~~~~~~~DvwslG  197 (336)
T cd07849         181 MLNSKGYTKAIDIWSVG  197 (336)
T ss_pred             hhCCCCCCcHHHHHHHH
Confidence            654  345568998864

Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase

>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1

Probab=99.86  E-value=3.5e-21  Score=200.32  Aligned_cols=177  Identities=17%  Similarity=0.201  Sum_probs=134.8

Q ss_pred             CCceeeeeeccCceEEEEE--------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCcccc
Q psy9184         262 ALKNCKKIGEGVYGEVFKL--------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTE  333 (562)
Q Consensus       262 ~y~~~~~LG~GsfG~Vyka--------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~  333 (562)
                      +|.+.+.||+|+||.||+|        ..||+|++....      ........+.+|+.+++++.+              
T Consensus         1 ~y~~~~~lg~G~~g~vy~~~~~~~~~~~~~aiK~~~~~~------~~~~~~~~~~~E~~~l~~l~~--------------   60 (332)
T cd07857           1 RYELIKELGQGAYGIVCSARNAETSEEETVAIKKITNVF------SKKILAKRALRELKLLRHFRG--------------   60 (332)
T ss_pred             CceEEEEccccCCeEEEEEEeCCCCcCceEEEEEecccc------ccchhHHHHHHHHHHHHHhcC--------------
Confidence            4788899999999999999        369999987532      112234567889999999964              


Q ss_pred             cccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc---cCCHHHHHHHHHHHHHHHH
Q psy9184         334 LLKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK---YRSPNQTYAMILQVVFSLA  410 (562)
Q Consensus       334 l~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~---~l~e~~i~~I~~QIl~aL~  410 (562)
                                 ||||+++++.+....         .....+|++||++. +++...+.   .+++..++.++.||+.||.
T Consensus        61 -----------h~~iv~~~~~~~~~~---------~~~~~~~~~~e~~~-~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~  119 (332)
T cd07857          61 -----------HKNITCLYDMDIVFP---------GNFNELYLYEELME-ADLHQIIRSGQPLTDAHFQSFIYQILCGLK  119 (332)
T ss_pred             -----------CCChheeeeeeeecc---------ccCCcEEEEEeccc-CCHHHHHhcCCCCCHHHHHHHHHHHHHHHH
Confidence                       489998887643210         01346899999986 44554442   4889999999999999999


Q ss_pred             HHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecC---------CcEEEeecCCCc
Q psy9184         411 VAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVG---------EKICYYDLSQDE  481 (562)
Q Consensus       411 yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~---------~g~v~~~l~~~p  481 (562)
                      |||+ .||+||||||+|||++.++                    .++|+|||+|+....         .+.+.+..|++|
T Consensus       120 ~LH~-~givH~dlkp~Nili~~~~--------------------~~kl~Dfg~a~~~~~~~~~~~~~~~~~~g~~~y~aP  178 (332)
T cd07857         120 YIHS-ANVLHRDLKPGNLLVNADC--------------------ELKICDFGLARGFSENPGENAGFMTEYVATRWYRAP  178 (332)
T ss_pred             HHHh-CCcccCCCCHHHeEEcCCC--------------------CEEeCcCCCceecccccccccccccCcccCccccCc
Confidence            9999 7999999999999999876                    799999999986543         122456678899


Q ss_pred             cccCC--CCCcHHHHHHHhhc
Q psy9184         482 ELFEG--EGDYQFDMYRMMRK  500 (562)
Q Consensus       482 elF~g--~~~~q~dIy~lm~~  500 (562)
                      |.+.+  ..+...|||++.-.
T Consensus       179 E~~~~~~~~~~~~Di~slGv~  199 (332)
T cd07857         179 EIMLSFQSYTKAIDVWSVGCI  199 (332)
T ss_pred             HHHhCCCCCCcHHHHHHHHHH
Confidence            97765  34566899986433

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co

>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4

Probab=99.86  E-value=3e-21  Score=197.66  Aligned_cols=168  Identities=22%  Similarity=0.350  Sum_probs=135.8

Q ss_pred             CceeeeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCccccccc
Q psy9184         263 LKNCKKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTELLK  336 (562)
Q Consensus       263 y~~~~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~l~~  336 (562)
                      |....+||+|+||.||++      +.||+|.+....        ......+.+|+.+++.++|                 
T Consensus        22 ~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~--------~~~~~~~~~e~~~l~~l~h-----------------   76 (292)
T cd06657          22 LDNFIKIGEGSTGIVCIATVKSSGKLVAVKKMDLRK--------QQRRELLFNEVVIMRDYQH-----------------   76 (292)
T ss_pred             hhhHHHcCCCCCeEEEEEEEcCCCeEEEEEEecccc--------hhHHHHHHHHHHHHHhcCC-----------------
Confidence            445578999999999999      789999886432        2334678899999999998                 


Q ss_pred             ccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc--cCCHHHHHHHHHHHHHHHHHHHh
Q psy9184         337 CSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK--YRSPNQTYAMILQVVFSLAVAEV  414 (562)
Q Consensus       337 ~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~--~l~e~~i~~I~~QIl~aL~yLH~  414 (562)
                               +|++++++.|..             ++..|+||||++++++.+.+.  .+++..+..++.|++.||+|||+
T Consensus        77 ---------~~iv~~~~~~~~-------------~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~  134 (292)
T cd06657          77 ---------ENVVEMYNSYLV-------------GDELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLKALSVLHA  134 (292)
T ss_pred             ---------cchhheeeEEEe-------------CCEEEEEEecCCCCcHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHH
Confidence                     999999998875             568999999999987655442  47899999999999999999999


Q ss_pred             hCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecCC-----cEEEeecCCCccccCC-CC
Q psy9184         415 ELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVGE-----KICYYDLSQDEELFEG-EG  488 (562)
Q Consensus       415 ~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~~-----g~v~~~l~~~pelF~g-~~  488 (562)
                       .||+||||||+||+++.++                    .++|+|||++......     ....+..|++||.+.+ ..
T Consensus       135 -~givH~dl~p~Nilv~~~~--------------------~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~  193 (292)
T cd06657         135 -QGVIHRDIKSDSILLTHDG--------------------RVKLSDFGFCAQVSKEVPRRKSLVGTPYWMAPELISRLPY  193 (292)
T ss_pred             -CCeecCCCCHHHEEECCCC--------------------CEEEcccccceecccccccccccccCccccCHHHhcCCCC
Confidence             7999999999999999876                    6999999998765431     1233556889997765 34


Q ss_pred             CcHHHHHHHh
Q psy9184         489 DYQFDMYRMM  498 (562)
Q Consensus       489 ~~q~dIy~lm  498 (562)
                      ..+.|+|++.
T Consensus       194 ~~~~Dv~slG  203 (292)
T cd06657         194 GPEVDIWSLG  203 (292)
T ss_pred             CchhhHHHHH
Confidence            5568888864

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo

>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein

Probab=99.86  E-value=6.5e-21  Score=195.74  Aligned_cols=185  Identities=12%  Similarity=0.129  Sum_probs=142.4

Q ss_pred             CceeeeeeccCceEEEEE----eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCccccccccc
Q psy9184         263 LKNCKKIGEGVYGEVFKL----NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTELLKCS  338 (562)
Q Consensus       263 y~~~~~LG~GsfG~Vyka----~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~l~~~~  338 (562)
                      +.+.+.+|.|+++.|+++    +.||||++....      ........+.+|+.+++.++|                   
T Consensus         4 ~~i~~~~~~~~~v~~~~~~~~~~~~avK~~~~~~------~~~~~~~~~~~Ei~~l~~l~h-------------------   58 (314)
T cd08216           4 TLIGKCFEDLMIVHLAKHKPTNTLVAVKKINLDS------CSKEDLKLLQQEIITSRQLQH-------------------   58 (314)
T ss_pred             hhhhHhhcCCceEEEEEecCCCCEEEEEEEeccc------cchhHHHHHHHHHHHHHhcCC-------------------
Confidence            345566777777777777    899999998652      123455788999999999998                   


Q ss_pred             ccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc-----cCCHHHHHHHHHHHHHHHHHHH
Q psy9184         339 CVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK-----YRSPNQTYAMILQVVFSLAVAE  413 (562)
Q Consensus       339 iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~-----~l~e~~i~~I~~QIl~aL~yLH  413 (562)
                             |||+++++.|..             ++..|++|||+.+|++.+.+.     .+++..+..++.||+.||.|||
T Consensus        59 -------~~i~~~~~~~~~-------------~~~~~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~LH  118 (314)
T cd08216          59 -------PNILPYVTSFIV-------------DSELYVVSPLMAYGSCEDLLKTHFPEGLPELAIAFILKDVLNALDYIH  118 (314)
T ss_pred             -------cchhhhhheeec-------------CCeEEEEEeccCCCCHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHH
Confidence                   999999998875             558999999999987765543     3789999999999999999999


Q ss_pred             hhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecCCc------------EEEeecCCCc
Q psy9184         414 VELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVGEK------------ICYYDLSQDE  481 (562)
Q Consensus       414 ~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~~g------------~v~~~l~~~p  481 (562)
                      + .+|+||||||+|||++.++                    .++|+|||.+......+            ...+..|.+|
T Consensus       119 ~-~~ivH~dlk~~Nili~~~~--------------------~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aP  177 (314)
T cd08216         119 S-KGFIHRSVKASHILLSGDG--------------------KVVLSGLRYSVSMIKHGKRQRVVHDFPKSSVKNLPWLSP  177 (314)
T ss_pred             H-CCeecCCCCcceEEEecCC--------------------ceEEecCccceeeccccccccccccccccccccccccCH
Confidence            9 7999999999999999876                    79999999987664311            1223457899


Q ss_pred             cccCCC---CCcHHHHHHHhhcccCCCCCCCCCCCh
Q psy9184         482 ELFEGE---GDYQFDMYRMMRKQCQNNWQNFTPKNN  514 (562)
Q Consensus       482 elF~g~---~~~q~dIy~lm~~~~~~~W~~~~P~tn  514 (562)
                      |++.+.   .....|+|+.+ ......+.+..|+.+
T Consensus       178 E~~~~~~~~~~~~~Diws~G-~il~el~~g~~pf~~  212 (314)
T cd08216         178 EVLQQNLQGYNEKSDIYSVG-ITACELANGHVPFKD  212 (314)
T ss_pred             HHhcCCCCCCCcchhHHHHH-HHHHHHHhCCCCCCC
Confidence            988763   34458998864 333335556666644

Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc

>KOG0696|consensus

Probab=99.86  E-value=4.6e-22  Score=205.41  Aligned_cols=191  Identities=16%  Similarity=0.174  Sum_probs=150.9

Q ss_pred             CCCCCceeeeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCccc
Q psy9184         259 PSSALKNCKKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFT  332 (562)
Q Consensus       259 ~~~~y~~~~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv  332 (562)
                      ...+|..+.+||+|+||.|.+|      +.||||++++...     ......+.-+.|-++|.....             
T Consensus       347 ~~tDFnFl~VlGKGSFGKVlLaerkgtdELyAiKiLkKDVi-----iQdDDvectm~EKrvLAL~~k-------------  408 (683)
T KOG0696|consen  347 KATDFNFLMVLGKGSFGKVLLAERKGTDELYAIKILKKDVI-----IQDDDVECTMVEKRVLALPGK-------------  408 (683)
T ss_pred             eecccceEEEeccCccceeeeecccCcchhhhhhhhcccee-----eecCcccceehhhhheecCCC-------------
Confidence            3467889999999999999999      8999999998642     122233444567777776655             


Q ss_pred             ccccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc---cCCHHHHHHHHHHHHHHH
Q psy9184         333 ELLKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK---YRSPNQTYAMILQVVFSL  409 (562)
Q Consensus       333 ~l~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~---~l~e~~i~~I~~QIl~aL  409 (562)
                                  ||.++.++..|++             -+.+|+||||++||+++.+++   ++-+..+..++..|+.||
T Consensus       409 ------------ppFL~qlHScFQT-------------mDRLyFVMEyvnGGDLMyhiQQ~GkFKEp~AvFYAaEiaigL  463 (683)
T KOG0696|consen  409 ------------PPFLVQLHSCFQT-------------MDRLYFVMEYVNGGDLMYHIQQVGKFKEPVAVFYAAEIAIGL  463 (683)
T ss_pred             ------------CchHHHHHHHhhh-------------hhheeeEEEEecCchhhhHHHHhcccCCchhhhhhHHHHHHh
Confidence                        6999999999986             569999999999999988876   488999999999999999


Q ss_pred             HHHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecCC-----cEEEeecCCCcccc
Q psy9184         410 AVAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVGE-----KICYYDLSQDEELF  484 (562)
Q Consensus       410 ~yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~~-----g~v~~~l~~~pelF  484 (562)
                      -+||+ .|||.||||.+|||++.+|                    ++||+|||+++.-.-.     .-++++-|++||+.
T Consensus       464 FFLh~-kgIiYRDLKLDNvmLd~eG--------------------HiKi~DFGmcKEni~~~~TTkTFCGTPdYiAPEIi  522 (683)
T KOG0696|consen  464 FFLHS-KGIIYRDLKLDNVMLDSEG--------------------HIKIADFGMCKENIFDGVTTKTFCGTPDYIAPEII  522 (683)
T ss_pred             hhhhc-CCeeeeeccccceEeccCC--------------------ceEeeecccccccccCCcceeeecCCCcccccceE
Confidence            99999 6999999999999999998                    8999999999865432     33567888888876


Q ss_pred             CCCCCcHHHHHHHhhcccCCCCCCCCCCC
Q psy9184         485 EGEGDYQFDMYRMMRKQCQNNWQNFTPKN  513 (562)
Q Consensus       485 ~g~~~~q~dIy~lm~~~~~~~W~~~~P~t  513 (562)
                      .-...-.+.-|+..|..+.++..+-.|+.
T Consensus       523 ~YqPYgksvDWWa~GVLLyEmlaGQpPFd  551 (683)
T KOG0696|consen  523 AYQPYGKSVDWWAFGVLLYEMLAGQPPFD  551 (683)
T ss_pred             EecccccchhHHHHHHHHHHHHcCCCCCC
Confidence            65432233445556666666666666663

>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11

Probab=99.85  E-value=5.5e-21  Score=190.54  Aligned_cols=229  Identities=17%  Similarity=0.169  Sum_probs=155.5

Q ss_pred             CCceeeeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCcccccc
Q psy9184         262 ALKNCKKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTELL  335 (562)
Q Consensus       262 ~y~~~~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~l~  335 (562)
                      +|.+.++||+|+||.||++      ..+++|+++.....   ........++..|+.+++.++|                
T Consensus         1 ~y~i~~~ig~g~~g~v~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~e~~~l~~l~h----------------   61 (260)
T cd08222           1 RYILQQRLGKGSFGTVYLVKDKKAVAEERLKVLKEIPVG---ELNPNETVQANQEAQLLSKLDH----------------   61 (260)
T ss_pred             CceeeeeecCCCCceEEEEEecCCCCcceEEEecccccc---ccCcchHHHHHHHHHHHHhCCC----------------
Confidence            4788999999999999998      34566665542210   1112223456789999999998                


Q ss_pred             cccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc-------cCCHHHHHHHHHHHHHH
Q psy9184         336 KCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK-------YRSPNQTYAMILQVVFS  408 (562)
Q Consensus       336 ~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~-------~l~e~~i~~I~~QIl~a  408 (562)
                                |||+++++.+.+             ....++||||+.++++...+.       .+++.+++.++.|++.|
T Consensus        62 ----------~~i~~~~~~~~~-------------~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~  118 (260)
T cd08222          62 ----------PAIVKFHASFLE-------------RDAFCIITEYCEGRDLDCKLEELKHTGKTLSENQVCEWFIQLLLG  118 (260)
T ss_pred             ----------CcHHHHHHHHhc-------------CCceEEEEEeCCCCCHHHHHHHHhhcccccCHHHHHHHHHHHHHH
Confidence                      999999999875             447899999999987755442       38899999999999999


Q ss_pred             HHHHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecCCcE-----EEeecCCCccc
Q psy9184         409 LAVAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVGEKI-----CYYDLSQDEEL  483 (562)
Q Consensus       409 L~yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~~g~-----v~~~l~~~pel  483 (562)
                      |.|||+ .|++|+||+|+||+++..                     .++|+|||+++.......     ..+..|.+||.
T Consensus       119 l~~lH~-~~i~h~~l~~~nili~~~---------------------~~~l~d~g~~~~~~~~~~~~~~~~~~~~~~~pe~  176 (260)
T cd08222         119 VHYMHQ-RRILHRDLKAKNIFLKNN---------------------LLKIGDFGVSRLLMGSCDLATTFTGTPYYMSPEA  176 (260)
T ss_pred             HHHHHH-cCccccCCChhheEeecC---------------------CEeecccCceeecCCCcccccCCCCCcCccCHHH
Confidence            999999 799999999999999754                     599999999987654221     12445778887


Q ss_pred             cCCC-CCcHHHHHHHhhcccCCCCCCCCCCChhhhHHHHHHHHhhcccCCCCCCCchhHHHHHHHHHHHhcCCCcCcCC
Q psy9184         484 FEGE-GDYQFDMYRMMRKQCQNNWQNFTPKNNVFWIHYLVDKATCLKKGYQYLRAPRHQAFELLEELGQNALHFDSCYE  561 (562)
Q Consensus       484 F~g~-~~~q~dIy~lm~~~~~~~W~~~~P~tn~~wl~yl~~~Ll~~~~~~~~~~~~~~~~~~~l~~l~~~~l~~~s~~~  561 (562)
                      +.+. .+.+.|+|++.-. ....+.+..|+....-.. +..+... + .++...   ...-..+.++..+++..+...|
T Consensus       177 ~~~~~~~~~~Dv~slG~~-~~~l~~~~~~~~~~~~~~-~~~~~~~-~-~~~~~~---~~~~~~~~~li~~~l~~~p~~R  248 (260)
T cd08222         177 LKHQGYDSKSDIWSLGCI-LYEMCCLAHAFEGQNFLS-VVLRIVE-G-PTPSLP---ETYSRQLNSIMQSMLNKDPSLR  248 (260)
T ss_pred             HccCCCCchhhHHHHHHH-HHHHHhCCCCCCCccHHH-HHHHHHc-C-CCCCCc---chhcHHHHHHHHHHhcCChhhC
Confidence            7653 3456888876322 222223333432221111 1122222 1 111111   1224567778889998887765

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check

>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase

Probab=99.85  E-value=8.7e-21  Score=196.39  Aligned_cols=188  Identities=19%  Similarity=0.209  Sum_probs=144.4

Q ss_pred             CCceeeeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCcccccc
Q psy9184         262 ALKNCKKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTELL  335 (562)
Q Consensus       262 ~y~~~~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~l~  335 (562)
                      +|++.+.||.|+||.||+|      +.||+|.+....      ......+.+.+|+.+++.++|                
T Consensus         1 ~y~i~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~------~~~~~~~~~~~e~~~l~~l~~----------------   58 (330)
T cd07834           1 RYELLKPIGSGAYGVVCSAVDKRTGRKVAIKKISNVF------DDLIDAKRILREIKLLRHLRH----------------   58 (330)
T ss_pred             CceeeeeecCCCCeEEEEEEeCCCCcEEEEEeecccc------ccchhhhhHHHHHHHHHhcCC----------------
Confidence            4788999999999999999      789999987542      113334678899999999998                


Q ss_pred             cccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc---cCCHHHHHHHHHHHHHHHHHH
Q psy9184         336 KCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK---YRSPNQTYAMILQVVFSLAVA  412 (562)
Q Consensus       336 ~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~---~l~e~~i~~I~~QIl~aL~yL  412 (562)
                                |||+++++++....        ......+|++|||+.+ ++...+.   .+++..++.++.||+.||+||
T Consensus        59 ----------~~i~~~~~~~~~~~--------~~~~~~~~lv~e~~~~-~l~~~l~~~~~l~~~~~~~i~~~l~~~l~~L  119 (330)
T cd07834          59 ----------ENIIGLLDILRPPS--------PEDFNDVYIVTELMET-DLHKVIKSPQPLTDDHIQYFLYQILRGLKYL  119 (330)
T ss_pred             ----------cchhhhhhhhcccC--------cccccceEEEecchhh-hHHHHHhCCCCCCHHHHHHHHHHHHHHHHHH
Confidence                      99999999887521        0123478999999974 4444432   488999999999999999999


Q ss_pred             HhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecCC--------cEEEeecCCCcccc
Q psy9184         413 EVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVGE--------KICYYDLSQDEELF  484 (562)
Q Consensus       413 H~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~~--------g~v~~~l~~~pelF  484 (562)
                      |+ .||+||||||+|||++.++                    .++|+|||++......        ....+..|.+||.+
T Consensus       120 H~-~gi~H~dlkp~nili~~~~--------------------~~~L~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~  178 (330)
T cd07834         120 HS-ANVIHRDLKPSNILVNSNC--------------------DLKICDFGLARGVDPDEDEKGFLTEYVVTRWYRAPELL  178 (330)
T ss_pred             Hh-CCeecCCCCHHHEEEcCCC--------------------CEEEcccCceEeecccccccccccccccccCcCCceee
Confidence            99 7999999999999999886                    7999999999987543        22346678999998


Q ss_pred             CCC--CCcHHHHHHHhhcccCCCCCCCCCC
Q psy9184         485 EGE--GDYQFDMYRMMRKQCQNNWQNFTPK  512 (562)
Q Consensus       485 ~g~--~~~q~dIy~lm~~~~~~~W~~~~P~  512 (562)
                      .+.  .....|+|++. ......+.+..|+
T Consensus       179 ~~~~~~~~~sDi~slG-~il~~l~~g~~pf  207 (330)
T cd07834         179 LSSSRYTKAIDIWSVG-CIFAELLTRKPLF  207 (330)
T ss_pred             ecccCCCcchhHHHHH-HHHHHHHcCCCCc
Confidence            775  34458998863 3332333444444

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and

>KOG0614|consensus

Probab=99.85  E-value=1.4e-22  Score=213.64  Aligned_cols=212  Identities=18%  Similarity=0.186  Sum_probs=165.5

Q ss_pred             CCCceeeeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCccccc
Q psy9184         261 SALKNCKKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTEL  334 (562)
Q Consensus       261 ~~y~~~~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~l  334 (562)
                      .+++.+..||-|+||.|-++      ..+|+|++++..     ..+.+..+++..|-.||..++.               
T Consensus       420 ~dl~~iaTLGvGgFGRVELV~~~~~~~~fAlKilkK~h-----IVdtkQqeHv~sEr~Im~~~~s---------------  479 (732)
T KOG0614|consen  420 SDLKRIATLGVGGFGRVELVKVNSQKATFALKILKKKH-----IVDTKQQEHVFSERNIMMECRS---------------  479 (732)
T ss_pred             hhhhhhhhcccCccceEEEEEecccchHHHHHHHhHhh-----ccchhHHHHHHhHHHHHHhcCc---------------
Confidence            56778889999999999998      348999999876     5567777899999999999998               


Q ss_pred             ccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc---cCCHHHHHHHHHHHHHHHHH
Q psy9184         335 LKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK---YRSPNQTYAMILQVVFSLAV  411 (562)
Q Consensus       335 ~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~---~l~e~~i~~I~~QIl~aL~y  411 (562)
                                 |+||++|..|.+             +..+|+.||-|-||++..-+.   .|++..++.++..+++|++|
T Consensus       480 -----------~fIvrLYrTfrd-------------~kyvYmLmEaClGGElWTiLrdRg~Fdd~tarF~~acv~EAfeY  535 (732)
T KOG0614|consen  480 -----------DFIVRLYRTFRD-------------SKYVYMLMEACLGGELWTILRDRGSFDDYTARFYVACVLEAFEY  535 (732)
T ss_pred             -----------hHHHHHHHHhcc-------------chhhhhhHHhhcCchhhhhhhhcCCcccchhhhhHHHHHHHHHH
Confidence                       999999999987             448999999999998866554   49999999999999999999


Q ss_pred             HHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecCC----cEEEeecCCCccccCCC
Q psy9184         412 AEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVGE----KICYYDLSQDEELFEGE  487 (562)
Q Consensus       412 LH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~~----g~v~~~l~~~pelF~g~  487 (562)
                      ||+ .|||.|||||+|.|++.+|                    .+||.|||+|+.+...    .-++++-|.+||+.-..
T Consensus       536 LH~-k~iIYRDLKPENllLd~~G--------------------y~KLVDFGFAKki~~g~KTwTFcGTpEYVAPEIILnK  594 (732)
T KOG0614|consen  536 LHR-KGIIYRDLKPENLLLDNRG--------------------YLKLVDFGFAKKIGSGRKTWTFCGTPEYVAPEIILNK  594 (732)
T ss_pred             HHh-cCceeccCChhheeeccCC--------------------ceEEeehhhHHHhccCCceeeecCCcccccchhhhcc
Confidence            999 6999999999999999998                    8999999999998763    34568899999988776


Q ss_pred             CCcHHHHHHHhhcccCCCCCCCCCCChh--hhHHHHHHHHhhcccCCCCCCCc
Q psy9184         488 GDYQFDMYRMMRKQCQNNWQNFTPKNNV--FWIHYLVDKATCLKKGYQYLRAP  538 (562)
Q Consensus       488 ~~~q~dIy~lm~~~~~~~W~~~~P~tn~--~wl~yl~~~Ll~~~~~~~~~~~~  538 (562)
                      +.-.+.-|+.+|....+-..+-.||+.+  +-...++-+=++ ...|+..-++
T Consensus       595 GHD~avDyWaLGIli~ELL~G~pPFs~~dpmktYn~ILkGid-~i~~Pr~I~k  646 (732)
T KOG0614|consen  595 GHDRAVDYWALGILIYELLTGSPPFSGVDPMKTYNLILKGID-KIEFPRRITK  646 (732)
T ss_pred             CcchhhHHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHhhhh-hhhcccccch
Confidence            5544444455666554444455555332  222233333334 4456644443

>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros

Probab=99.85  E-value=3e-21  Score=193.13  Aligned_cols=226  Identities=19%  Similarity=0.184  Sum_probs=153.2

Q ss_pred             eeeeccCceEEEEE------------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCccccc
Q psy9184         267 KKIGEGVYGEVFKL------------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTEL  334 (562)
Q Consensus       267 ~~LG~GsfG~Vyka------------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~l  334 (562)
                      +.||+|+||.||+|            ..+|+|.+....       .......+.+|+.+++.++|               
T Consensus         1 ~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~iK~~~~~~-------~~~~~~~~~~e~~~l~~l~h---------------   58 (269)
T cd05044           1 NFLGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGA-------TDQEKKEFLKEAHLMSNFNH---------------   58 (269)
T ss_pred             CccccccceeEEeeeecccccCcccceeehhhhhhccc-------chhhHHHHHHHHHHHHhcCC---------------
Confidence            36899999999998            258889876432       12334578899999999998               


Q ss_pred             ccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc----------cCCHHHHHHHHHH
Q psy9184         335 LKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK----------YRSPNQTYAMILQ  404 (562)
Q Consensus       335 ~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~----------~l~e~~i~~I~~Q  404 (562)
                                 |||+++++++..             .+..|++|||+++|++.+.+.          .+++.++..++.|
T Consensus        59 -----------~~i~~~~~~~~~-------------~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~  114 (269)
T cd05044          59 -----------PNIVKLLGVCLL-------------NEPQYIIMELMEGGDLLSYLRDARVERFGPPLLTLKELLDICLD  114 (269)
T ss_pred             -----------CCeeeEeeeecC-------------CCCeEEEEeccCCCcHHHHHHHhhhcccCCccccHHHHHHHHHH
Confidence                       999999988864             457899999999998876653          2678899999999


Q ss_pred             HHHHHHHHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecCC-------cEEEeec
Q psy9184         405 VVFSLAVAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVGE-------KICYYDL  477 (562)
Q Consensus       405 Il~aL~yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~~-------g~v~~~l  477 (562)
                      |+.||.|||+ .+++|+||||+|||++.++..               ....++|+|||+++.....       ....+..
T Consensus       115 l~~~l~~lH~-~~i~H~dl~p~nil~~~~~~~---------------~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~  178 (269)
T cd05044         115 VAKGCVYLEQ-MHFIHRDLAARNCLVSEKGYD---------------ADRVVKIGDFGLARDIYKSDYYRKEGEGLLPVR  178 (269)
T ss_pred             HHHHHHHHHh-CCcccCCCChheEEEecCCCC---------------CCcceEECCcccccccccccccccCcccCCCcc
Confidence            9999999999 799999999999999886410               0126999999999865321       1122345


Q ss_pred             CCCccccCC-CCCcHHHHHHHhhcccCCCCC-CCCCCChhhhHHHHHHHHhhcccCCCCCCCchhHHHHHHHHHHHhcCC
Q psy9184         478 SQDEELFEG-EGDYQFDMYRMMRKQCQNNWQ-NFTPKNNVFWIHYLVDKATCLKKGYQYLRAPRHQAFELLEELGQNALH  555 (562)
Q Consensus       478 ~~~pelF~g-~~~~q~dIy~lm~~~~~~~W~-~~~P~tn~~wl~yl~~~Ll~~~~~~~~~~~~~~~~~~~l~~l~~~~l~  555 (562)
                      |++||.+.+ ....+.|||++. ......|. +..|+....-.. +..++.. ...+..+..    .-..+.+|..++|.
T Consensus       179 y~aPE~~~~~~~~~~~Dv~slG-~il~ellt~g~~p~~~~~~~~-~~~~~~~-~~~~~~~~~----~~~~~~~li~~~l~  251 (269)
T cd05044         179 WMAPESLLDGKFTTQSDVWSFG-VLMWEILTLGQQPYPALNNQE-VLQHVTA-GGRLQKPEN----CPDKIYQLMTNCWA  251 (269)
T ss_pred             ccCHHHHccCCcccchhHHHHH-HHHHHHHHcCCCCCcccCHHH-HHHHHhc-CCccCCccc----chHHHHHHHHHHcC
Confidence            788887654 456668998853 33333332 444442211111 1111111 112221111    13456677788887


Q ss_pred             CcCcCC
Q psy9184         556 FDSCYE  561 (562)
Q Consensus       556 ~~s~~~  561 (562)
                      .+...|
T Consensus       252 ~~p~~R  257 (269)
T cd05044         252 QDPSER  257 (269)
T ss_pred             CCcccC
Confidence            766554

Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male

>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins

Probab=99.85  E-value=1.3e-20  Score=192.16  Aligned_cols=193  Identities=19%  Similarity=0.253  Sum_probs=143.0

Q ss_pred             CCCCceeeeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCcccc
Q psy9184         260 SSALKNCKKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTE  333 (562)
Q Consensus       260 ~~~y~~~~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~  333 (562)
                      .++|.+.++||+|+||.||+|      +.+|+|++.....      .......+.+|+.+++.++|              
T Consensus         7 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~------~~~~~~~~~~e~~~l~~l~h--------------   66 (311)
T cd07866           7 LRDYEILGKLGEGTFGEVYKARQIKTGRVVALKKILMHNE------KDGFPITALREIKILKKLKH--------------   66 (311)
T ss_pred             cccEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEEeccC------CCCcchhHHHHHHHHHhcCC--------------
Confidence            368999999999999999999      7899999876431      11112345789999999998              


Q ss_pred             cccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc----cCCHHHHHHHHHHHHHHH
Q psy9184         334 LLKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK----YRSPNQTYAMILQVVFSL  409 (562)
Q Consensus       334 l~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~----~l~e~~i~~I~~QIl~aL  409 (562)
                                  |||+++++.+......     .......+|+||||+.+ .+...+.    .+++..+..++.||+.||
T Consensus        67 ------------~~i~~~~~~~~~~~~~-----~~~~~~~~~lv~~~~~~-~l~~~~~~~~~~~~~~~~~~i~~~l~~al  128 (311)
T cd07866          67 ------------PNVVPLIDMAVERPDK-----SKRKRGSVYMVTPYMDH-DLSGLLENPSVKLTESQIKCYMLQLLEGI  128 (311)
T ss_pred             ------------CCccchhhheeccccc-----ccccCceEEEEEecCCc-CHHHHHhccccCCCHHHHHHHHHHHHHHH
Confidence                        9999998887643210     01124578999999974 3444332    489999999999999999


Q ss_pred             HHHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecCC----------------cEE
Q psy9184         410 AVAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVGE----------------KIC  473 (562)
Q Consensus       410 ~yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~~----------------g~v  473 (562)
                      .|||+ .||+||||||+|||++.++                    .++|+|||+++.....                .++
T Consensus       129 ~~lH~-~~i~H~dl~p~nil~~~~~--------------------~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~  187 (311)
T cd07866         129 NYLHE-NHILHRDIKAANILIDNQG--------------------ILKIADFGLARPYDGPPPNPKGGGGGGTRKYTNLV  187 (311)
T ss_pred             HHHHh-CCeecCCCCHHHEEECCCC--------------------CEEECcCccchhccCCCcccccCCcccccccccce
Confidence            99999 7999999999999999886                    7999999999865431                224


Q ss_pred             EeecCCCccccCCC--CCcHHHHHHHhhcccCCCCCCCCCC
Q psy9184         474 YYDLSQDEELFEGE--GDYQFDMYRMMRKQCQNNWQNFTPK  512 (562)
Q Consensus       474 ~~~l~~~pelF~g~--~~~q~dIy~lm~~~~~~~W~~~~P~  512 (562)
                      .+..|++||.+.+.  .+...|||++. ......+.+..|+
T Consensus       188 ~~~~y~aPE~~~~~~~~~~~~Dv~slG-~il~el~~g~~~~  227 (311)
T cd07866         188 VTRWYRPPELLLGERRYTTAVDIWGIG-CVFAEMFTRRPIL  227 (311)
T ss_pred             eccCcCChHHhhCCCccCchhHhHHHH-HHHHHHHhCCCCC
Confidence            45668999987653  45568998863 3332333344443

Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic

>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases

Probab=99.85  E-value=3.5e-21  Score=194.29  Aligned_cols=170  Identities=21%  Similarity=0.328  Sum_probs=138.7

Q ss_pred             CCceeeeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCcccccc
Q psy9184         262 ALKNCKKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTELL  335 (562)
Q Consensus       262 ~y~~~~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~l~  335 (562)
                      +|++.+.||+|+||.||+|      +.||+|+++....      .......+.+|+.+++.++|                
T Consensus         2 ~y~~~~~i~~g~~~~v~~~~~~~~~~~v~vK~~~~~~~------~~~~~~~~~~e~~~l~~l~~----------------   59 (288)
T cd07833           2 KYEVLGVVGEGAYGVVLKCRNKATGEIVAIKKFKESED------DEDVKKTALREVKVLRQLRH----------------   59 (288)
T ss_pred             ceeEEEEecccCCeeEEEEEeCCCCcEEEEehhhhhcc------cccchhHHHHHHHHHHhcCC----------------
Confidence            5889999999999999999      6899999875421      22334678899999999998                


Q ss_pred             cccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc----cCCHHHHHHHHHHHHHHHHH
Q psy9184         336 KCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK----YRSPNQTYAMILQVVFSLAV  411 (562)
Q Consensus       336 ~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~----~l~e~~i~~I~~QIl~aL~y  411 (562)
                                +||+++++.+..             ++.+|++|||+.++ ++..+.    .+++.++..++.||+.||.|
T Consensus        60 ----------~~i~~~~~~~~~-------------~~~~~iv~e~~~~~-~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~  115 (288)
T cd07833          60 ----------ENIVNLKEAFRR-------------KGRLYLVFEYVERT-LLELLEASPGGLPPDAVRSYIWQLLQAIAY  115 (288)
T ss_pred             ----------CCeeehhheEEE-------------CCEEEEEEecCCCC-HHHHHHhcCCCCCHHHHHHHHHHHHHHHHH
Confidence                      999999998875             55899999999875 444332    38899999999999999999


Q ss_pred             HHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecCCc------EEEeecCCCccccC
Q psy9184         412 AEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVGEK------ICYYDLSQDEELFE  485 (562)
Q Consensus       412 LH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~~g------~v~~~l~~~pelF~  485 (562)
                      ||+ .+|+||||+|+||+++.++                    .++|+|||++.......      .+.+..|++||++.
T Consensus       116 LH~-~~i~H~dl~~~ni~~~~~~--------------------~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~~~PE~~~  174 (288)
T cd07833         116 CHS-HNIIHRDIKPENILVSESG--------------------VLKLCDFGFARALRARPASPLTDYVATRWYRAPELLV  174 (288)
T ss_pred             HHH-CCeecCCCCHHHeEECCCC--------------------CEEEEeeecccccCCCccccccCcccccCCcCCchhc
Confidence            999 7999999999999999876                    79999999998765422      23456789999876


Q ss_pred             CC--CCcHHHHHHHh
Q psy9184         486 GE--GDYQFDMYRMM  498 (562)
Q Consensus       486 g~--~~~q~dIy~lm  498 (562)
                      +.  .+...|+|++.
T Consensus       175 ~~~~~~~~~Dv~slG  189 (288)
T cd07833         175 GDTNYGKPVDVWAIG  189 (288)
T ss_pred             CCCCcCchhhHHHHH
Confidence            64  34558998863

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning

>PRK09188 serine/threonine protein kinase; Provisional

Probab=99.85  E-value=5.7e-21  Score=202.18  Aligned_cols=143  Identities=15%  Similarity=0.060  Sum_probs=108.9

Q ss_pred             CCCCceeeeeeccCceEEEEE-------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCccc
Q psy9184         260 SSALKNCKKIGEGVYGEVFKL-------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFT  332 (562)
Q Consensus       260 ~~~y~~~~~LG~GsfG~Vyka-------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv  332 (562)
                      .++|.+.+.||+|+||+||+|       +.+|||++......   .........+.+|+.+|+.++|             
T Consensus        17 ~~~Y~~~~~IG~G~fg~Vy~a~~~~~~~~~vAiK~~~~~~~~---~~~~~~~~~~~~E~~iL~~L~h-------------   80 (365)
T PRK09188         17 SARFVETAVLKRDVFSTVERGYFAGDPGTARAVRRRVSEVPW---WSKPLARHLAAREIRALKTVRG-------------   80 (365)
T ss_pred             cCCceEccEEeecCcEEEEEEEEcCCCCeEEEEEEecccccc---cccHHHHHHHHHHHHHHHhccC-------------
Confidence            367999999999999999999       45799987632100   0112334568899999999998             


Q ss_pred             ccccccccCCCCCCCcee-ehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccccCCHHHHHHHHHHHHHHHHH
Q psy9184         333 ELLKCSCVRGRYPDRLVT-LWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIKYRSPNQTYAMILQVVFSLAV  411 (562)
Q Consensus       333 ~l~~~~iv~g~~~pnIv~-l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~~l~e~~i~~I~~QIl~aL~y  411 (562)
                                   ++++. +++                 .+..|+||||++|+++. ......   ...++.|++.||.|
T Consensus        81 -------------~~iv~~l~~-----------------~~~~~LVmE~~~G~~L~-~~~~~~---~~~~~~~i~~aL~~  126 (365)
T PRK09188         81 -------------IGVVPQLLA-----------------TGKDGLVRGWTEGVPLH-LARPHG---DPAWFRSAHRALRD  126 (365)
T ss_pred             -------------CCCCcEEEE-----------------cCCcEEEEEccCCCCHH-HhCccc---hHHHHHHHHHHHHH
Confidence                         77763 432                 12579999999988664 222111   25688999999999


Q ss_pred             HHhhCCeEeccC-CCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecCCcEE
Q psy9184         412 AEVELEFEHRDL-HMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVGEKIC  473 (562)
Q Consensus       412 LH~~~~IiHRDL-KpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~~g~v  473 (562)
                      ||+ .||+|||| ||+|||++.++                    .++|+|||+|+.....++.
T Consensus       127 lH~-~gIiHrDL~KP~NILv~~~~--------------------~ikLiDFGlA~~~~~~~~~  168 (365)
T PRK09188        127 LHR-AGITHNDLAKPQNWLMGPDG--------------------EAAVIDFQLASVFRRRGAL  168 (365)
T ss_pred             HHH-CCCeeCCCCCcceEEEcCCC--------------------CEEEEECccceecccCcch
Confidence            999 79999999 99999997765                    6999999999987664433

>PHA02882 putative serine/threonine kinase; Provisional

Probab=99.85  E-value=7.5e-21  Score=194.68  Aligned_cols=186  Identities=17%  Similarity=0.098  Sum_probs=121.1

Q ss_pred             CCCCceeeeeeccCceEEEEE---------eeEEEEEeecCCCCCCcchhH-H--HHHHHHHHHHHHHhcCCccccCCCC
Q psy9184         260 SSALKNCKKIGEGVYGEVFKL---------NNSVIKIMPIEGDQSVNGEEQ-K--KFREIFSEIMVTKETSDLQYRTENS  327 (562)
Q Consensus       260 ~~~y~~~~~LG~GsfG~Vyka---------~~vAIKii~~~~~~~~~~~~~-~--~~~~il~Ei~ilk~L~h~~~~~~n~  327 (562)
                      ..+|++.++||+|+||.||+|         ..+|+|+.............. .  .......+...+..+.|        
T Consensus        11 ~~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~~k~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~h--------   82 (294)
T PHA02882         11 GKEWKIDKLIGCGGFGCVYETQCASDHCINNQAVAKIENLENETIVMETLVYNNIYDIDKIALWKNIHNIDH--------   82 (294)
T ss_pred             CCceEEeeEEecCCCceEEEEEEcCCcccccceEEEeccccCCchhhHHHHHHhhhhHHHHHHHHHhccCCC--------
Confidence            467999999999999999999         255666544432110000000 0  00111122223333444        


Q ss_pred             CCcccccccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCC--CCccccccCCHHHHHHHHHHH
Q psy9184         328 TPCFTELLKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGG--NDSGDIKYRSPNQTYAMILQV  405 (562)
Q Consensus       328 ~p~fv~l~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG--~ll~~l~~l~e~~i~~I~~QI  405 (562)
                                        ++++++++......         ......|++||++...  ..+......++..+..++.||
T Consensus        83 ------------------~~i~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi  135 (294)
T PHA02882         83 ------------------LGIPKYYGCGSFKR---------CRMYYRFILLEKLVENTKEIFKRIKCKNKKLIKNIMKDM  135 (294)
T ss_pred             ------------------CCCCcEEEeeeEec---------CCceEEEEEEehhccCHHHHHHhhccCCHHHHHHHHHHH
Confidence                              78888776543311         0011457888877422  112222236788899999999


Q ss_pred             HHHHHHHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecCC------------cEE
Q psy9184         406 VFSLAVAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVGE------------KIC  473 (562)
Q Consensus       406 l~aL~yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~~------------g~v  473 (562)
                      +.||+|||+ .+|+||||||+|||++.++                    .++|+|||+|+.....            ...
T Consensus       136 ~~~l~~lH~-~~iiHrDiKp~Nill~~~~--------------------~~~l~DFGla~~~~~~~~~~~~~~~~~~~~~  194 (294)
T PHA02882        136 LTTLEYIHE-HGISHGDIKPENIMVDGNN--------------------RGYIIDYGIASHFIIHGKHIEYSKEQKDLHR  194 (294)
T ss_pred             HHHHHHHHh-CCeecCCCCHHHEEEcCCC--------------------cEEEEEcCCceeeccCCcccccccccccccC
Confidence            999999999 7999999999999998775                    6999999999876421            123


Q ss_pred             EeecCCCccccCCC-CCcHHHHHHHhhcc
Q psy9184         474 YYDLSQDEELFEGE-GDYQFDMYRMMRKQ  501 (562)
Q Consensus       474 ~~~l~~~pelF~g~-~~~q~dIy~lm~~~  501 (562)
                      ++..|++|+++.+. .+.+.|||++.-..
T Consensus       195 gt~~y~ape~~~~~~~~~~~DiwSlG~~l  223 (294)
T PHA02882        195 GTLYYAGLDAHNGACVTRRGDLESLGYCM  223 (294)
T ss_pred             CCccccCHHHhCCCCCCcHHHHHHHHHHH
Confidence            56778899988774 56679999864443

>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase

Probab=99.85  E-value=7.1e-21  Score=192.87  Aligned_cols=229  Identities=21%  Similarity=0.240  Sum_probs=162.3

Q ss_pred             CCCCCceeeeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCccc
Q psy9184         259 PSSALKNCKKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFT  332 (562)
Q Consensus       259 ~~~~y~~~~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv  332 (562)
                      +...|+..+.||+|+||.||+|      ..+|+|++....        . ....+.+|+.+++.++|             
T Consensus        17 ~~~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~--------~-~~~~~~~e~~~l~~l~~-------------   74 (286)
T cd06614          17 PRELYKNLEKIGEGASGEVYKATDRATGKEVAIKKMRLRK--------Q-NKELIINEILIMKDCKH-------------   74 (286)
T ss_pred             ccccchHhHhccCCCCeEEEEEEEccCCcEEEEEEEecCc--------h-hHHHHHHHHHHHHHCCC-------------
Confidence            4466888999999999999999      779999998653        1 34678899999999998             


Q ss_pred             ccccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc----cCCHHHHHHHHHHHHHH
Q psy9184         333 ELLKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK----YRSPNQTYAMILQVVFS  408 (562)
Q Consensus       333 ~l~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~----~l~e~~i~~I~~QIl~a  408 (562)
                                   +|++++++.+..             ++..|+++||++|+++.+.+.    .+++.++..++.|++.|
T Consensus        75 -------------~~i~~~~~~~~~-------------~~~~~lv~e~~~~~~L~~~l~~~~~~l~~~~~~~i~~~i~~~  128 (286)
T cd06614          75 -------------PNIVDYYDSYLV-------------GDELWVVMEYMDGGSLTDIITQNFVRMNEPQIAYVCREVLQG  128 (286)
T ss_pred             -------------CCeeEEEEEEEE-------------CCEEEEEEeccCCCcHHHHHHHhccCCCHHHHHHHHHHHHHH
Confidence                         999999988875             468999999999887766553    48899999999999999


Q ss_pred             HHHHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecCC-----cEEEeecCCCccc
Q psy9184         409 LAVAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVGE-----KICYYDLSQDEEL  483 (562)
Q Consensus       409 L~yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~~-----g~v~~~l~~~pel  483 (562)
                      |.|||+ .||+|+||+|+||+++.++                    .++|+|||++......     .......|.+||.
T Consensus       129 L~~lH~-~gi~H~dl~p~ni~i~~~~--------------------~~~l~d~~~~~~~~~~~~~~~~~~~~~~y~~PE~  187 (286)
T cd06614         129 LEYLHS-QNVIHRDIKSDNILLSKDG--------------------SVKLADFGFAAQLTKEKSKRNSVVGTPYWMAPEV  187 (286)
T ss_pred             HHHHHh-CCeeeCCCChhhEEEcCCC--------------------CEEECccchhhhhccchhhhccccCCcccCCHhH
Confidence            999999 7999999999999999876                    7999999988755431     2223456788987


Q ss_pred             cCCC-CCcHHHHHHHhhcccCCCCCCCCCCChhhhHHHHHHHHhhcccCCCCCCCchhHHHHHHHHHHHhcCCCcCcCC
Q psy9184         484 FEGE-GDYQFDMYRMMRKQCQNNWQNFTPKNNVFWIHYLVDKATCLKKGYQYLRAPRHQAFELLEELGQNALHFDSCYE  561 (562)
Q Consensus       484 F~g~-~~~q~dIy~lm~~~~~~~W~~~~P~tn~~wl~yl~~~Ll~~~~~~~~~~~~~~~~~~~l~~l~~~~l~~~s~~~  561 (562)
                      +.+. .+.+.|+|++.-.. ...+.+..|+.+.....-.......   ..+. .......-..+.+|...+++.+...|
T Consensus       188 ~~~~~~~~~~Dv~slGvil-~~l~~g~~p~~~~~~~~~~~~~~~~---~~~~-~~~~~~~~~~l~~li~~~l~~~p~~R  261 (286)
T cd06614         188 IKRKDYGPKVDIWSLGIMC-IEMAEGEPPYLREPPLRALFLITTK---GIPP-LKNPEKWSPEFKDFLNKCLVKDPEKR  261 (286)
T ss_pred             hcCCCCCCccccHHHHHHH-HHHHhCCCCCCCCCHHHHHHHHHhc---CCCC-CcchhhCCHHHHHHHHHHhccChhhC
Confidence            7653 45568888643322 2344455555433222111111111   1111 00111123456677777777766554

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou

>KOG0983|consensus

Probab=99.85  E-value=1.1e-21  Score=194.27  Aligned_cols=175  Identities=21%  Similarity=0.281  Sum_probs=140.7

Q ss_pred             CCCceeeeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCccccc
Q psy9184         261 SALKNCKKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTEL  334 (562)
Q Consensus       261 ~~y~~~~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~l  334 (562)
                      .+.+.+..||.|+.|.|+++      ...|||.+....       +.....+++..+.++.+.+.               
T Consensus        92 ndl~~l~dlGsGtcG~V~k~~~rs~~~iiAVK~M~rt~-------Nkee~kRILmDldvv~~s~d---------------  149 (391)
T KOG0983|consen   92 NDLENLGDLGSGTCGQVWKMRFRSTGHIIAVKQMRRTG-------NKEENKRILMDLDVVLKSHD---------------  149 (391)
T ss_pred             HHhhhHHhhcCCCccceEEEEEcccceEEEEEeecccC-------CHHHHHHHHHhhhHHhhccC---------------
Confidence            35677889999999999999      789999999875       23344678888888877665               


Q ss_pred             ccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc-----cCCHHHHHHHHHHHHHHH
Q psy9184         335 LKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK-----YRSPNQTYAMILQVVFSL  409 (562)
Q Consensus       335 ~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~-----~l~e~~i~~I~~QIl~aL  409 (562)
                                +|+||+.|++|..             +..++|+||.|.  .-++.+.     .++|..+-.+...++.||
T Consensus       150 ----------cpyIV~c~GyFi~-------------n~dV~IcMelMs--~C~ekLlkrik~piPE~ilGk~tva~v~AL  204 (391)
T KOG0983|consen  150 ----------CPYIVQCFGYFIT-------------NTDVFICMELMS--TCAEKLLKRIKGPIPERILGKMTVAIVKAL  204 (391)
T ss_pred             ----------CCeeeeeeeEEee-------------CchHHHHHHHHH--HHHHHHHHHhcCCchHHhhhhhHHHHHHHH
Confidence                      4999999999975             558899999983  3344442     489999999999999999


Q ss_pred             HHHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecC----CcEEEeecCCCccccC
Q psy9184         410 AVAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVG----EKICYYDLSQDEELFE  485 (562)
Q Consensus       410 ~yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~----~g~v~~~l~~~pelF~  485 (562)
                      .||.++++|||||+||+|||++..|                    .+||||||+|..+.+    ....+...||+||-..
T Consensus       205 ~YLKeKH~viHRDvKPSNILlDe~G--------------------niKlCDFGIsGrlvdSkAhtrsAGC~~YMaPERid  264 (391)
T KOG0983|consen  205 YYLKEKHGVIHRDVKPSNILLDERG--------------------NIKLCDFGISGRLVDSKAHTRSAGCAAYMAPERID  264 (391)
T ss_pred             HHHHHhcceeecccCccceEEccCC--------------------CEEeecccccceeecccccccccCCccccCccccC
Confidence            9999999999999999999999998                    799999999988765    2223356789999776


Q ss_pred             CC----CCcHHHHHHHhhccc
Q psy9184         486 GE----GDYQFDMYRMMRKQC  502 (562)
Q Consensus       486 g~----~~~q~dIy~lm~~~~  502 (562)
                      ..    ++..+|+|++.-+..
T Consensus       265 p~~~~kYDiRaDVWSlGITlv  285 (391)
T KOG0983|consen  265 PPDKPKYDIRADVWSLGITLV  285 (391)
T ss_pred             CCCCCccchhhhhhhhccchh
Confidence            63    555688888654443

>KOG0596|consensus

Probab=99.85  E-value=2.3e-21  Score=206.61  Aligned_cols=159  Identities=16%  Similarity=0.231  Sum_probs=135.2

Q ss_pred             CCCCceeeeeeccCceEEEEE-----eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCccccc
Q psy9184         260 SSALKNCKKIGEGVYGEVFKL-----NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTEL  334 (562)
Q Consensus       260 ~~~y~~~~~LG~GsfG~Vyka-----~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~l  334 (562)
                      ...|+++++||.||.+.||++     ..||+|.+...      ..+...+.-+.+|+.+|.+|+.               
T Consensus       360 g~~Yeilk~iG~GGSSkV~kV~~s~~~iyalkkv~~~------~~D~qtl~gy~nEI~lL~KLkg---------------  418 (677)
T KOG0596|consen  360 GREYEILKQIGSGGSSKVFKVLNSDKQIYALKKVVLL------EADNQTLDGYRNEIALLNKLKG---------------  418 (677)
T ss_pred             cchhhHHHhhcCCCcceeeeeecCCCcchhhhHHHHh------hcCHHHHHHHHHHHHHHHHhcC---------------
Confidence            357899999999999999999     78888887765      3456778899999999999998               


Q ss_pred             ccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCcccccc-----CCHHHHHHHHHHHHHHH
Q psy9184         335 LKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIKY-----RSPNQTYAMILQVVFSL  409 (562)
Q Consensus       335 ~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~~-----l~e~~i~~I~~QIl~aL  409 (562)
                                |.+||++|++-..             ++.+|+||||-+  .+|.++..     .+...++.+..|++.|+
T Consensus       419 ----------~~~IIqL~DYEv~-------------d~~lYmvmE~Gd--~DL~kiL~k~~~~~~~~~lk~ywkqML~aV  473 (677)
T KOG0596|consen  419 ----------HDKIIQLYDYEVT-------------DGYLYMVMECGD--IDLNKILKKKKSIDPDWFLKFYWKQMLLAV  473 (677)
T ss_pred             ----------CceEEEEeeeecc-------------CceEEEEeeccc--ccHHHHHHhccCCCchHHHHHHHHHHHHHH
Confidence                      6899999887653             779999999975  56666642     44448999999999999


Q ss_pred             HHHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecC-------CcEEEeecCCCcc
Q psy9184         410 AVAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVG-------EKICYYDLSQDEE  482 (562)
Q Consensus       410 ~yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~-------~g~v~~~l~~~pe  482 (562)
                      .++|. +||||.||||.|.|+-..                     .+||+|||+|..+..       ...++|.-||+||
T Consensus       474 ~~IH~-~gIVHSDLKPANFLlVkG---------------------~LKLIDFGIA~aI~~DTTsI~kdsQvGT~NYMsPE  531 (677)
T KOG0596|consen  474 KTIHQ-HGIVHSDLKPANFLLVKG---------------------RLKLIDFGIANAIQPDTTSIVKDSQVGTVNYMSPE  531 (677)
T ss_pred             HHHHH-hceeecCCCcccEEEEee---------------------eEEeeeechhcccCccccceeeccccCcccccCHH
Confidence            99999 799999999999999876                     799999999998875       4456788999999


Q ss_pred             ccCC
Q psy9184         483 LFEG  486 (562)
Q Consensus       483 lF~g  486 (562)
                      .|..
T Consensus       532 Al~~  535 (677)
T KOG0596|consen  532 ALTD  535 (677)
T ss_pred             HHhh
Confidence            8876

>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases

Probab=99.84  E-value=2e-20  Score=183.14  Aligned_cols=169  Identities=25%  Similarity=0.423  Sum_probs=140.3

Q ss_pred             CCceeeeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCcccccc
Q psy9184         262 ALKNCKKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTELL  335 (562)
Q Consensus       262 ~y~~~~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~l~  335 (562)
                      +|...+.||+|+||.||++      ..+|+|++....        ......+.+|+.+++.++|                
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~--------~~~~~~~~~e~~~l~~l~~----------------   56 (253)
T cd05122           1 LFEILEKIGKGGFGEVYKARHKRTGKEVAIKVIKLES--------KEKKEKIINEIQILKKCKH----------------   56 (253)
T ss_pred             CceeeeeeccCCceEEEEEEECCCCcEEEEEEecccc--------hhHHHHHHHHHHHHHhCCC----------------
Confidence            4778899999999999999      679999998653        1345678899999999998                


Q ss_pred             cccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc----cCCHHHHHHHHHHHHHHHHH
Q psy9184         336 KCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK----YRSPNQTYAMILQVVFSLAV  411 (562)
Q Consensus       336 ~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~----~l~e~~i~~I~~QIl~aL~y  411 (562)
                                |+++++.+.+..             +...++++||++|+++.+.+.    .+++..+..++.|++.||.+
T Consensus        57 ----------~~i~~~~~~~~~-------------~~~~~l~~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~  113 (253)
T cd05122          57 ----------PNIVKYYGSYLK-------------KDELWIVMEFCSGGSLKDLLKSTNQTLTESQIAYVCKELLKGLEY  113 (253)
T ss_pred             ----------CCEeEEEEEEec-------------CCeEEEEEecCCCCcHHHHHhhcCCCCCHHHHHHHHHHHHHHHHH
Confidence                      999999988865             458999999999887765442    47899999999999999999


Q ss_pred             HHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecCC----cEEEeecCCCccccCC-
Q psy9184         412 AEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVGE----KICYYDLSQDEELFEG-  486 (562)
Q Consensus       412 LH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~~----g~v~~~l~~~pelF~g-  486 (562)
                      ||+ .|++||||+|+||+++.++                    .++|+|||++......    ....+..|.+||.+.+ 
T Consensus       114 lh~-~~i~h~dl~p~ni~i~~~~--------------------~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~  172 (253)
T cd05122         114 LHS-NGIIHRDIKAANILLTSDG--------------------EVKLIDFGLSAQLSDTKARNTMVGTPYWMAPEVINGK  172 (253)
T ss_pred             hhc-CCEecCCCCHHHEEEccCC--------------------eEEEeeccccccccccccccceecCCcccCHHHHcCC
Confidence            999 7999999999999999876                    7999999999877643    3445667888997765 


Q ss_pred             CCCcHHHHHHHh
Q psy9184         487 EGDYQFDMYRMM  498 (562)
Q Consensus       487 ~~~~q~dIy~lm  498 (562)
                      ..+.+.|+|++.
T Consensus       173 ~~~~~~Dv~slG  184 (253)
T cd05122         173 PYDYKADIWSLG  184 (253)
T ss_pred             CCCccccHHHHH
Confidence            345568888853

Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core

>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1

Probab=99.84  E-value=3.1e-20  Score=193.51  Aligned_cols=173  Identities=18%  Similarity=0.226  Sum_probs=136.5

Q ss_pred             CCCCceeeeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCcccc
Q psy9184         260 SSALKNCKKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTE  333 (562)
Q Consensus       260 ~~~y~~~~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~  333 (562)
                      .++|++.+.||+|+||.||+|      +.||+|++.....      .......+.+|+.+++.++|              
T Consensus         9 ~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~------~~~~~~~~~~E~~~l~~l~h--------------   68 (328)
T cd07856           9 TNRYVDLQPVGMGAFGLVCSARDQLTGQNVAIKKIMKPFS------TPVLAKRTYRELKLLKHLRH--------------   68 (328)
T ss_pred             ccceEEEEeecccCCeEEEEEEECCCCCEEEEEEeccccc------ccchhHHHHHHHHHHHhcCC--------------
Confidence            467999999999999999999      7899998875421      12233567789999999998              


Q ss_pred             cccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc--cCCHHHHHHHHHHHHHHHHH
Q psy9184         334 LLKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK--YRSPNQTYAMILQVVFSLAV  411 (562)
Q Consensus       334 l~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~--~l~e~~i~~I~~QIl~aL~y  411 (562)
                                  |||++++++|..            .....|++|||+. +++...+.  .+++..+..++.||+.||.|
T Consensus        69 ------------pniv~~~~~~~~------------~~~~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~ql~~aL~~  123 (328)
T cd07856          69 ------------ENIISLSDIFIS------------PLEDIYFVTELLG-TDLHRLLTSRPLEKQFIQYFLYQILRGLKY  123 (328)
T ss_pred             ------------CCeeeEeeeEec------------CCCcEEEEeehhc-cCHHHHHhcCCCCHHHHHHHHHHHHHHHHH
Confidence                        999999988753            1346899999994 44433332  47888899999999999999


Q ss_pred             HHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecC--CcEEEeecCCCccccCC--C
Q psy9184         412 AEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVG--EKICYYDLSQDEELFEG--E  487 (562)
Q Consensus       412 LH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~--~g~v~~~l~~~pelF~g--~  487 (562)
                      ||+ .+|+||||+|.|||++.++                    .++|+|||+++....  .+.+....|.+||.+.+  .
T Consensus       124 LH~-~~iiH~dl~p~Nili~~~~--------------------~~~l~dfg~~~~~~~~~~~~~~~~~y~aPE~~~~~~~  182 (328)
T cd07856         124 VHS-AGVVHRDLKPSNILINENC--------------------DLKICDFGLARIQDPQMTGYVSTRYYRAPEIMLTWQK  182 (328)
T ss_pred             HHh-CCcccCCCCHHHEeECCCC--------------------CEEeCccccccccCCCcCCCcccccccCceeeeccCC
Confidence            999 7999999999999998876                    799999999986543  22334556889997755  3


Q ss_pred             CCcHHHHHHHh
Q psy9184         488 GDYQFDMYRMM  498 (562)
Q Consensus       488 ~~~q~dIy~lm  498 (562)
                      .....|+|++.
T Consensus       183 ~~~~~Dv~slG  193 (328)
T cd07856         183 YDVEVDIWSAG  193 (328)
T ss_pred             cCcHHHHHHHH
Confidence            45669998864

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U

>KOG4721|consensus

Probab=99.84  E-value=2.9e-22  Score=213.36  Aligned_cols=161  Identities=19%  Similarity=0.200  Sum_probs=133.5

Q ss_pred             CCCceeeeeeccCceEEEEE----eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCccccccc
Q psy9184         261 SALKNCKKIGEGVYGEVFKL----NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTELLK  336 (562)
Q Consensus       261 ~~y~~~~~LG~GsfG~Vyka----~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~l~~  336 (562)
                      +....++.||.|+.|.||+|    +.||||.++.-.               ..+|+-|++|+|                 
T Consensus       124 e~IsELeWlGSGaQGAVF~Grl~netVAVKKV~elk---------------ETdIKHLRkLkH-----------------  171 (904)
T KOG4721|consen  124 EEISELEWLGSGAQGAVFLGRLHNETVAVKKVRELK---------------ETDIKHLRKLKH-----------------  171 (904)
T ss_pred             HHhhhhhhhccCcccceeeeeccCceehhHHHhhhh---------------hhhHHHHHhccC-----------------
Confidence            34556789999999999999    999999887321               346788999998                 


Q ss_pred             ccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc---cCCHHHHHHHHHHHHHHHHHHH
Q psy9184         337 CSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK---YRSPNQTYAMILQVVFSLAVAE  413 (562)
Q Consensus       337 ~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~---~l~e~~i~~I~~QIl~aL~yLH  413 (562)
                               ||||.+.+++..             ...+|||||||..|.|...++   .+.......|..+|+.|++|||
T Consensus       172 ---------~NII~FkGVCtq-------------sPcyCIiMEfCa~GqL~~VLka~~~itp~llv~Wsk~IA~GM~YLH  229 (904)
T KOG4721|consen  172 ---------PNIITFKGVCTQ-------------SPCYCIIMEFCAQGQLYEVLKAGRPITPSLLVDWSKGIAGGMNYLH  229 (904)
T ss_pred             ---------cceeeEeeeecC-------------CceeEEeeeccccccHHHHHhccCccCHHHHHHHHHHhhhhhHHHH
Confidence                     899988888865             447899999999999888775   3788899999999999999999


Q ss_pred             hhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecCC----cEEEeecCCCccccCCCC-
Q psy9184         414 VELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVGE----KICYYDLSQDEELFEGEG-  488 (562)
Q Consensus       414 ~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~~----g~v~~~l~~~pelF~g~~-  488 (562)
                      . +.|||||||.-||||..++                    .|||+|||-++...+.    ...++..||+||+..... 
T Consensus       230 ~-hKIIHRDLKSPNiLIs~~d--------------------~VKIsDFGTS~e~~~~STkMSFaGTVaWMAPEvIrnePc  288 (904)
T KOG4721|consen  230 L-HKIIHRDLKSPNILISYDD--------------------VVKISDFGTSKELSDKSTKMSFAGTVAWMAPEVIRNEPC  288 (904)
T ss_pred             H-hhHhhhccCCCceEeeccc--------------------eEEeccccchHhhhhhhhhhhhhhhHhhhCHHHhhcCCc
Confidence            9 8999999999999999997                    7999999999877652    334567789999988743 


Q ss_pred             CcHHHHHH
Q psy9184         489 DYQFDMYR  496 (562)
Q Consensus       489 ~~q~dIy~  496 (562)
                      ..+.|||+
T Consensus       289 sEKVDIwS  296 (904)
T KOG4721|consen  289 SEKVDIWS  296 (904)
T ss_pred             ccccceeh
Confidence            33456654

>PTZ00024 cyclin-dependent protein kinase; Provisional

Probab=99.84  E-value=1.8e-20  Score=194.80  Aligned_cols=177  Identities=20%  Similarity=0.279  Sum_probs=135.9

Q ss_pred             CCCc-eeeeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhH------HHHHHHHHHHHHHHhcCCccccCCCC
Q psy9184         261 SALK-NCKKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQ------KKFREIFSEIMVTKETSDLQYRTENS  327 (562)
Q Consensus       261 ~~y~-~~~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~------~~~~~il~Ei~ilk~L~h~~~~~~n~  327 (562)
                      .+|. +.+.||.|+||.||+|      +.||||++.............      .....+.+|+.+++.++|        
T Consensus         8 ~ry~~~~~~ig~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h--------   79 (335)
T PTZ00024          8 ERYIQKGAHLGEGTYGKVEKAYDTLTGKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELKIMNEIKH--------   79 (335)
T ss_pred             cchhhhhhcccCCCceeEEEEEECCCCCeEEEEEeeccccccccccchhhhcccccchhHHHHHHHHHhCCC--------
Confidence            5565 4577999999999999      789999987643211000000      011256789999999998        


Q ss_pred             CCcccccccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc---cCCHHHHHHHHHH
Q psy9184         328 TPCFTELLKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK---YRSPNQTYAMILQ  404 (562)
Q Consensus       328 ~p~fv~l~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~---~l~e~~i~~I~~Q  404 (562)
                                        |||++++++|..             ++..|+||||+. |++.+.+.   .+++..+..++.|
T Consensus        80 ------------------~~iv~~~~~~~~-------------~~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~q  127 (335)
T PTZ00024         80 ------------------ENIMGLVDVYVE-------------GDFINLVMDIMA-SDLKKVVDRKIRLTESQVKCILLQ  127 (335)
T ss_pred             ------------------cceeeeeEEEec-------------CCcEEEEEeccc-cCHHHHHHhcCCCCHHHHHHHHHH
Confidence                              999999988864             558999999997 55655553   3899999999999


Q ss_pred             HHHHHHHHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecC---------------
Q psy9184         405 VVFSLAVAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVG---------------  469 (562)
Q Consensus       405 Il~aL~yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~---------------  469 (562)
                      |+.||.|||+ .||+||||||+||+++..+                    .++|+|||+++....               
T Consensus       128 l~~aL~~LH~-~~i~H~dl~~~nill~~~~--------------------~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~  186 (335)
T PTZ00024        128 ILNGLNVLHK-WYFMHRDLSPANIFINSKG--------------------ICKIADFGLARRYGYPPYSDTLSKDETMQR  186 (335)
T ss_pred             HHHHHHHHHh-CCeecccccHHHeEECCCC--------------------CEEECCccceeecccccccccccccccccc
Confidence            9999999999 7999999999999998876                    799999999987651               


Q ss_pred             ----CcEEEeecCCCccccCCC--CCcHHHHHHHh
Q psy9184         470 ----EKICYYDLSQDEELFEGE--GDYQFDMYRMM  498 (562)
Q Consensus       470 ----~g~v~~~l~~~pelF~g~--~~~q~dIy~lm  498 (562)
                          .....+..|.+||.+.+.  .....|+|++.
T Consensus       187 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG  221 (335)
T PTZ00024        187 REEMTSKVVTLWYRAPELLMGAEKYHFAVDMWSVG  221 (335)
T ss_pred             cccccccccccCCCCChhcccCCCCCcHHHHHHHH
Confidence                112235568899987663  35568998864

>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15

Probab=99.84  E-value=2.4e-20  Score=194.21  Aligned_cols=172  Identities=21%  Similarity=0.289  Sum_probs=134.9

Q ss_pred             CCCceeeeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhc-CCccccCCCCCCcccc
Q psy9184         261 SALKNCKKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKET-SDLQYRTENSTPCFTE  333 (562)
Q Consensus       261 ~~y~~~~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L-~h~~~~~~n~~p~fv~  333 (562)
                      .+|++.+.||+|+||.||+|      ..+|+|.+.....      .......+.+|+.+++.+ +|              
T Consensus         7 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~vK~~~~~~~------~~~~~~~~~~E~~~l~~l~~h--------------   66 (337)
T cd07852           7 RKYEILQKLGKGAYGIVWKAIDRRTKEVVALKKIFDAFR------NATDAQRTFREIMFLQELGDH--------------   66 (337)
T ss_pred             hHHHHhHhhcCCCCeeEEEEEEcCCCeEEEEEeeccccC------cchhhhhhhHHHHHHHHhcCC--------------
Confidence            56899999999999999999      6899998864321      122234567899999999 76              


Q ss_pred             cccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc--cCCHHHHHHHHHHHHHHHHH
Q psy9184         334 LLKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK--YRSPNQTYAMILQVVFSLAV  411 (562)
Q Consensus       334 l~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~--~l~e~~i~~I~~QIl~aL~y  411 (562)
                                  |||+++++++...           ....+|+||||+. +++...+.  .+++..+..++.||+.||.|
T Consensus        67 ------------~ni~~~~~~~~~~-----------~~~~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~i~~qi~~~L~~  122 (337)
T cd07852          67 ------------PNIVKLLNVIKAE-----------NDKDIYLVFEYME-TDLHAVIRANILEDVHKRYIMYQLLKALKY  122 (337)
T ss_pred             ------------CCccceeeeeccC-----------CCceEEEEecccc-cCHHHHHhcCCCCHHHHHHHHHHHHHHHHH
Confidence                        9999999887542           1346899999997 45555443  47888999999999999999


Q ss_pred             HHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecCCc----------EEEeecCCCc
Q psy9184         412 AEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVGEK----------ICYYDLSQDE  481 (562)
Q Consensus       412 LH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~~g----------~v~~~l~~~p  481 (562)
                      ||+ .||+||||||+||+++.++                    .++|+|||+++......          .+.+..|++|
T Consensus       123 LH~-~~i~H~dl~p~nill~~~~--------------------~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~~~~y~aP  181 (337)
T cd07852         123 IHS-GNVIHRDLKPSNILLNSDC--------------------RVKLADFGLARSLSELEENPENPVLTDYVATRWYRAP  181 (337)
T ss_pred             HHH-CCeecCCCCHHHEEEcCCC--------------------cEEEeeccchhccccccccccCcchhcccccccccCc
Confidence            999 7999999999999999886                    79999999998664321          2335568899


Q ss_pred             cccCCC--CCcHHHHHHH
Q psy9184         482 ELFEGE--GDYQFDMYRM  497 (562)
Q Consensus       482 elF~g~--~~~q~dIy~l  497 (562)
                      |.+.+.  .....|+|++
T Consensus       182 E~~~~~~~~~~~sDi~sl  199 (337)
T cd07852         182 EILLGSTRYTKGVDMWSV  199 (337)
T ss_pred             eeeeccccccccchHHHH
Confidence            987653  3445888875

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul

>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase

Probab=99.84  E-value=2e-20  Score=195.77  Aligned_cols=178  Identities=18%  Similarity=0.286  Sum_probs=138.3

Q ss_pred             CCCCceeeeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCcccc
Q psy9184         260 SSALKNCKKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTE  333 (562)
Q Consensus       260 ~~~y~~~~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~  333 (562)
                      .++|+..+.||+|+||.||+|      ..||+|++....      ........+.+|+.+++.+.|              
T Consensus        14 ~~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~------~~~~~~~~~~~E~~~l~~l~h--------------   73 (343)
T cd07851          14 PDRYQNLSPVGSGAYGQVCSAFDTKTGRKVAIKKLSRPF------QSAIHAKRTYRELRLLKHMDH--------------   73 (343)
T ss_pred             cCceEEEEEeccCCceEEEEEEECCCCcEEEEEeccccc------chhhHHHHHHHHHHHHHhccC--------------
Confidence            367999999999999999999      789999887532      112334567889999999988              


Q ss_pred             cccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc--cCCHHHHHHHHHHHHHHHHH
Q psy9184         334 LLKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK--YRSPNQTYAMILQVVFSLAV  411 (562)
Q Consensus       334 l~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~--~l~e~~i~~I~~QIl~aL~y  411 (562)
                                  ||++++.+.+.....       .......|+|+||+ ++++.+.+.  .+++.+++.++.||+.||.|
T Consensus        74 ------------~~iv~~~~~~~~~~~-------~~~~~~~~lv~e~~-~~~L~~~~~~~~l~~~~~~~~~~ql~~aL~~  133 (343)
T cd07851          74 ------------ENVIGLLDVFTPASS-------LEDFQDVYLVTHLM-GADLNNIVKCQKLSDDHIQFLVYQILRGLKY  133 (343)
T ss_pred             ------------CCHHHHHHHhhcccc-------ccccccEEEEEecC-CCCHHHHHhcCCCCHHHHHHHHHHHHHHHHH
Confidence                        999999888864220       01123589999999 455544432  48999999999999999999


Q ss_pred             HHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecC--CcEEEeecCCCccccCC--C
Q psy9184         412 AEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVG--EKICYYDLSQDEELFEG--E  487 (562)
Q Consensus       412 LH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~--~g~v~~~l~~~pelF~g--~  487 (562)
                      ||+ .||+||||||+||+++.++                    .++|+|||++.....  .+...+..|++||++.+  .
T Consensus       134 LH~-~gi~H~dlkp~Nill~~~~--------------------~~kL~dfg~~~~~~~~~~~~~~~~~y~aPE~~~~~~~  192 (343)
T cd07851         134 IHS-AGIIHRDLKPSNIAVNEDC--------------------ELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMH  192 (343)
T ss_pred             HHH-CCeecCCCCHHHeEECCCC--------------------CEEEccccccccccccccCCcccccccCHHHHhCCCC
Confidence            999 7999999999999999876                    799999999987643  23344666889997654  3


Q ss_pred             CCcHHHHHHHh
Q psy9184         488 GDYQFDMYRMM  498 (562)
Q Consensus       488 ~~~q~dIy~lm  498 (562)
                      ...+.|+|++.
T Consensus       193 ~~~~~DvwslG  203 (343)
T cd07851         193 YNQTVDIWSVG  203 (343)
T ss_pred             CCchHhHHHHH
Confidence            45568998863

Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK

>KOG1151|consensus

Probab=99.84  E-value=1.3e-21  Score=203.48  Aligned_cols=235  Identities=17%  Similarity=0.201  Sum_probs=164.9

Q ss_pred             CCCceeeeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCccccc
Q psy9184         261 SALKNCKKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTEL  334 (562)
Q Consensus       261 ~~y~~~~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~l  334 (562)
                      ++|-++..||+|||++||+|      +.||+|+-.....+ .++..........+|..|.+.|+|               
T Consensus       463 ~RYLlLhLLGrGGFSEVyKAFDl~EqRYvAvKIHqlNK~W-rdEKKeNYhKHAcREyrIHKeLDH---------------  526 (775)
T KOG1151|consen  463 DRYLLLHLLGRGGFSEVYKAFDLTEQRYVAVKIHQLNKNW-RDEKKENYHKHACREYRIHKELDH---------------  526 (775)
T ss_pred             HHHHHHHHhccccHHHHHHhcccchhheeeEeeehhccch-hhHhhhhHHHHHHHHHhhhhccCc---------------
Confidence            68899999999999999999      89999997765422 222334556788999999999999               


Q ss_pred             ccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc----cCCHHHHHHHHHHHHHHHH
Q psy9184         335 LKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK----YRSPNQTYAMILQVVFSLA  410 (562)
Q Consensus       335 ~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~----~l~e~~i~~I~~QIl~aL~  410 (562)
                                 |.||++|++|.-            ..+.+|-|+|||+|. +|+.+.    .+++.+++.|+.||+.||.
T Consensus       527 -----------pRIVKlYDyfsl------------DtdsFCTVLEYceGN-DLDFYLKQhklmSEKEARSIiMQiVnAL~  582 (775)
T KOG1151|consen  527 -----------PRIVKLYDYFSL------------DTDSFCTVLEYCEGN-DLDFYLKQHKLMSEKEARSIIMQIVNALK  582 (775)
T ss_pred             -----------ceeeeeeeeeee------------ccccceeeeeecCCC-chhHHHHhhhhhhHHHHHHHHHHHHHHHH
Confidence                       999999999964            356789999999965 555443    3899999999999999999


Q ss_pred             HHHhh-CCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecCC------cE------EEeec
Q psy9184         411 VAEVE-LEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVGE------KI------CYYDL  477 (562)
Q Consensus       411 yLH~~-~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~~------g~------v~~~l  477 (562)
                      ||.+. -.|||-||||.|||+.....                .| .+||+||||++...+.      |.      .++-+
T Consensus       583 YLNEikpPIIHYDLKPgNILLv~Gta----------------cG-eIKITDFGLSKIMdddSy~~vdGmeLTSQgAGTYW  645 (775)
T KOG1151|consen  583 YLNEIKPPIIHYDLKPGNILLVNGTA----------------CG-EIKITDFGLSKIMDDDSYNSVDGMELTSQGAGTYW  645 (775)
T ss_pred             HHhccCCCeeeeccCCccEEEecCcc----------------cc-eeEeeecchhhhccCCccCcccceeeecccCceee
Confidence            99982 23999999999999976531                12 7999999999988751      11      12556


Q ss_pred             CCCccccCCC-----CCcHHHHHHHhhcccCCCCCCCCCCChhhhHHHHHHH--Hhh-cccCCCCCCCchhHHHHHHHHH
Q psy9184         478 SQDEELFEGE-----GDYQFDMYRMMRKQCQNNWQNFTPKNNVFWIHYLVDK--ATC-LKKGYQYLRAPRHQAFELLEEL  549 (562)
Q Consensus       478 ~~~pelF~g~-----~~~q~dIy~lm~~~~~~~W~~~~P~tn~~wl~yl~~~--Ll~-~~~~~~~~~~~~~~~~~~l~~l  549 (562)
                      |..||-|.-.     -....|+|+..- ..+...-+..||.+..--..+.+.  .+. ..+.|++...-.    -.-+.|
T Consensus       646 YLPPEcFvVgkePPKIsnKVDVWSvGV-IFyQClYGrKPFGhnqsQQdILqeNTIlkAtEVqFP~KPvVs----seAkaF  720 (775)
T KOG1151|consen  646 YLPPECFVVGKEPPKISNKVDVWSVGV-IFYQCLYGRKPFGHNQSQQDILQENTILKATEVQFPPKPVVS----SEAKAF  720 (775)
T ss_pred             ecCcceeecCCCCCccccceeeEeeeh-hhhhhhccCCCCCCchhHHHHHhhhchhcceeccCCCCCccC----HHHHHH
Confidence            6778876542     223377776433 333344455566544322222221  122 145566544322    245667


Q ss_pred             HHhcCCCc
Q psy9184         550 GQNALHFD  557 (562)
Q Consensus       550 ~~~~l~~~  557 (562)
                      +++.|+|.
T Consensus       721 IRRCLaYR  728 (775)
T KOG1151|consen  721 IRRCLAYR  728 (775)
T ss_pred             HHHHHHhh
Confidence            78888764

>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases

Probab=99.84  E-value=3e-20  Score=187.15  Aligned_cols=176  Identities=20%  Similarity=0.269  Sum_probs=133.4

Q ss_pred             CceeeeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCccccccc
Q psy9184         263 LKNCKKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTELLK  336 (562)
Q Consensus       263 y~~~~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~l~~  336 (562)
                      |++.+.||+|+||.||+|      ..||+|++.....      .......+.+|+.+++.+..+.               
T Consensus         1 y~~~~~l~~g~~~~v~~~~~~~~~~~~aiK~~~~~~~------~~~~~~~~~~e~~~l~~l~~~~---------------   59 (287)
T cd07838           1 YEELAEIGEGAYGTVYKARDLNTGRFVALKKVRVPLS------EEGIPLSTLREIALLKQLESFE---------------   59 (287)
T ss_pred             CeEEEEecccCceEEEEEEECCCCCEEEEEEeccccc------cchhhhhHHHHHHHHHHhhccC---------------
Confidence            577899999999999999      6899999986531      1222345667888887775211               


Q ss_pred             ccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc-----cCCHHHHHHHHHHHHHHHHH
Q psy9184         337 CSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK-----YRSPNQTYAMILQVVFSLAV  411 (562)
Q Consensus       337 ~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~-----~l~e~~i~~I~~QIl~aL~y  411 (562)
                              |||++++++.+....        ......++++|||+.+ .+.+.+.     .+++.+++.++.||+.||.|
T Consensus        60 --------h~~i~~~~~~~~~~~--------~~~~~~~~l~~e~~~~-~l~~~l~~~~~~~l~~~~~~~~~~~i~~al~~  122 (287)
T cd07838          60 --------HPNIVRLLDVCHGPR--------TDRELKLTLVFEHVDQ-DLATYLSKCPKPGLPPETIKDLMRQLLRGVDF  122 (287)
T ss_pred             --------CCCcceEEEEEeecc--------CCCCceeEEEehhccc-CHHHHHHHccCCCCCHHHHHHHHHHHHHHHHH
Confidence                    399999998887522        0012358999999974 4544332     37899999999999999999


Q ss_pred             HHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecC----CcEEEeecCCCccccCCC
Q psy9184         412 AEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVG----EKICYYDLSQDEELFEGE  487 (562)
Q Consensus       412 LH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~----~g~v~~~l~~~pelF~g~  487 (562)
                      ||+ .+|+|+||+|+||+++.++                    .++|+|||++.....    .....+..|.+||.+.+.
T Consensus       123 LH~-~~i~h~~l~~~nili~~~~--------------------~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~PE~~~~~  181 (287)
T cd07838         123 LHS-HRIVHRDLKPQNILVTSDG--------------------QVKIADFGLARIYSFEMALTSVVVTLWYRAPEVLLQS  181 (287)
T ss_pred             HHH-CCeeeccCChhhEEEccCC--------------------CEEEeccCcceeccCCcccccccccccccChHHhccC
Confidence            999 7999999999999999886                    799999999987643    233455668899987763


Q ss_pred             -CCcHHHHHHH
Q psy9184         488 -GDYQFDMYRM  497 (562)
Q Consensus       488 -~~~q~dIy~l  497 (562)
                       ...+.|+|+.
T Consensus       182 ~~~~~~Di~s~  192 (287)
T cd07838         182 SYATPVDMWSV  192 (287)
T ss_pred             CCCCcchhhhH
Confidence             4555888875

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both

>COG5072 ALK1 Serine/threonine kinase of the haspin family [Cell division and chromosome partitioning]

Probab=99.84  E-value=5.7e-20  Score=189.32  Aligned_cols=283  Identities=23%  Similarity=0.377  Sum_probs=201.6

Q ss_pred             CCcccCchhHhHHHHHhhhccCccccccccCCCCCCceeeeeeccCceEEEEE-----eeEEEEEeecCCCCCCcchhHH
Q psy9184         228 SSLQYDDNEFCRKKILDICQQEDVVSFEDRYPSSALKNCKKIGEGVYGEVFKL-----NNSVIKIMPIEGDQSVNGEEQK  302 (562)
Q Consensus       228 ~~~~f~~~~~~~~~ll~~~~q~~~~~f~~~~~~~~y~~~~~LG~GsfG~Vyka-----~~vAIKii~~~~~~~~~~~~~~  302 (562)
                      ++..+.-......+.|+...+.+-.+|.........+. ..+|.|.++.++.+     ..++-+..+....      ...
T Consensus       122 ss~s~slk~k~sh~slqk~k~rrk~~~sQ~~ns~~kk~-~pvpDqvs~dk~Q~k~~~stsl~~l~s~~~l~------~n~  194 (488)
T COG5072         122 SSLSNSLKHKPSHRSLQKVKQRRKGPFSQFVNSQTKKI-CPVPDQVSSDKIQAKLADSTSLVSLVSPFGLP------GNA  194 (488)
T ss_pred             cccccccccCchHHHHHHHHHhccCCcchhcccccccc-ccCcccchhhhhhhhhccCcceeeccccccCC------CCc
Confidence            33444323334466666666655555655444344443 48999999999998     5555555543311      111


Q ss_pred             HHHHHHHHHHHHHhcCCccccCCCCCCcccccccccccCCCCCC-C---------------cee----------ehh-hh
Q psy9184         303 KFREIFSEIMVTKETSDLQYRTENSTPCFTELLKCSCVRGRYPD-R---------------LVT----------LWE-EF  355 (562)
Q Consensus       303 ~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~l~~~~iv~g~~~p-n---------------Iv~----------l~~-~f  355 (562)
                      .-.+...+.+|++.+.-         .+|.+....+.|-|-|+. |               |.+          .++ .|
T Consensus       195 ~d~d~~nl~QI~q~~dv---------k~fan~~~v~~vlgl~~~ln~~~s~qlssn~~q~~i~kkvs~g~~~~~~~d~~f  265 (488)
T COG5072         195 QDADVLNLVQILQWCDV---------KGFANLHQVVVVLGLYPSLNLEESDQLSSNNWQENICKKVSLGSTQDYTVDCLF  265 (488)
T ss_pred             cccchHHHHHHHHHhhh---------hhhccccceeEEecccccccchhhhHHhhhcchheeecccccccchhhhhhhhh
Confidence            12345667778777765         566666666666665541 1               111          000 00


Q ss_pred             h---------cccc-----CCCCCCCCCC-CCeEEEEEEecCCCCCccccccCCHHHHHHHHHHHHHHHHHHHhhCCeEe
Q psy9184         356 A---------KTKK-----SYNDHPSMFE-EDQIFIILELKNGGNDSGDIKYRSPNQTYAMILQVVFSLAVAEVELEFEH  420 (562)
Q Consensus       356 ~---------~~~~-----s~~~~p~~~~-~~~l~LVmE~~~gG~ll~~l~~l~e~~i~~I~~QIl~aL~yLH~~~~IiH  420 (562)
                      .         -...     .....|..+. ++++|++.-+-.+|+.+..+.....+++..++++.+.-++-+..++.+.|
T Consensus       266 ls~~ele~l~L~qw~~~g~~~~e~~~vv~~de~~y~yl~~kdhgt~is~ik~~~~~e~lsff~s~~sil~~lekkf~feh  345 (488)
T COG5072         266 LSLTELEHLELRQWRECGSVFLETLKVVSLDETLYLYLHFKDHGTPISIIKADRSEEELSFFWSCISILDILEKKFPFEH  345 (488)
T ss_pred             hhccccchhhhhhhhhccchhhhcceEEecCCceEEEEEEecCCceeeeeecccHHHHHHHHHHHHHHHhhhhhcCCccc
Confidence            0         0000     0000122222 55666666666678889888888999999999999999999999899999


Q ss_pred             ccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecCCcEEEeecCCCccccCCCCCcHHHHHHHhhc
Q psy9184         421 RDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVGEKICYYDLSQDEELFEGEGDYQFDMYRMMRK  500 (562)
Q Consensus       421 RDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~~g~v~~~l~~~pelF~g~~~~q~dIy~lm~~  500 (562)
                      ||+...||||+ +|                    .|.||||-+||...+.+.+.+.....|-+|.|.+++|++||++|+.
T Consensus       346 rnlt~~niLId-~G--------------------nvtLIDfklsRl~~~q~~isy~rldhp~lF~G~dd~QFeIYrlMr~  404 (488)
T COG5072         346 RNLTLDNILID-EG--------------------NVTLIDFKLSRLSYSQGIISYNRLDHPDLFNGVDDYQFEIYRLMRR  404 (488)
T ss_pred             ccccccceeee-cC--------------------ceEEEEeeeeecccCCceeeccccCchhhhcCccceeeeHHHHHHH
Confidence            99999999999 55                    7999999999988899999999999999999999999999999999


Q ss_pred             ccCCCCCCCCCCChhhhHHHHHHHHhhcccCCCCCCCchhHHHHHHHH
Q psy9184         501 QCQNNWQNFTPKNNVFWIHYLVDKATCLKKGYQYLRAPRHQAFELLEE  548 (562)
Q Consensus       501 ~~~~~W~~~~P~tn~~wl~yl~~~Ll~~~~~~~~~~~~~~~~~~~l~~  548 (562)
                      .+...|..|.|.+|++||+|+.+.|+. .+.+..+.+...+.+..+++
T Consensus       405 l~~g~wa~F~P~TNvlWL~yLs~~llk-k~~~~~~kt~~nr~~~~l~~  451 (488)
T COG5072         405 LLKGRWAQFEPITNVLWLYYLSHQLLK-KKNLSSPKTETNRLMRRLKQ  451 (488)
T ss_pred             HhcCcHHhcccchhhHHHHHHHHHHHh-hcccccccchHHHHHHHHHH
Confidence            999999999999999999999999999 77888888777666544444

>KOG1094|consensus

Probab=99.83  E-value=2.7e-21  Score=206.79  Aligned_cols=172  Identities=24%  Similarity=0.310  Sum_probs=136.7

Q ss_pred             CCCCCCceeeeeeccCceEEEEE-----eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCccc
Q psy9184         258 YPSSALKNCKKIGEGVYGEVFKL-----NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFT  332 (562)
Q Consensus       258 ~~~~~y~~~~~LG~GsfG~Vyka-----~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv  332 (562)
                      ||.+...+.++||+|.||+|.+|     ..||+|.++...       ......+|.+|+++|.+|+|             
T Consensus       535 fPRs~L~~~ekiGeGqFGEVhLCeveg~lkVAVK~Lr~~a-------~~~~r~~F~kEIkiLsqLkh-------------  594 (807)
T KOG1094|consen  535 FPRSRLRFKEKIGEGQFGEVHLCEVEGPLKVAVKILRPDA-------TKNARNDFLKEIKILSRLKH-------------  594 (807)
T ss_pred             cchhheehhhhhcCcccceeEEEEecCceEEEEeecCccc-------chhHHHHHHHHHHHHhccCC-------------
Confidence            57788899999999999999999     789999998653       23345789999999999998             


Q ss_pred             ccccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCcccccc-----CCHHHHHHHHHHHHH
Q psy9184         333 ELLKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIKY-----RSPNQTYAMILQVVF  407 (562)
Q Consensus       333 ~l~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~~-----l~e~~i~~I~~QIl~  407 (562)
                                   |||+++++++..             ++.++++|||++.|++-..+..     +.-.....|+.||+.
T Consensus       595 -------------PNIveLvGVC~~-------------DePicmI~EYmEnGDLnqFl~aheapt~~t~~~vsi~tqias  648 (807)
T KOG1094|consen  595 -------------PNIVELLGVCVQ-------------DDPLCMITEYMENGDLNQFLSAHELPTAETAPGVSICTQIAS  648 (807)
T ss_pred             -------------CCeeEEEeeeec-------------CCchHHHHHHHhcCcHHHHHHhccCcccccchhHHHHHHHHH
Confidence                         888888888764             6689999999999977655542     234566779999999


Q ss_pred             HHHHHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecC-------CcEEEeecCCC
Q psy9184         408 SLAVAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVG-------EKICYYDLSQD  480 (562)
Q Consensus       408 aL~yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~-------~g~v~~~l~~~  480 (562)
                      |++||.+ ++||||||-+.|+|++.+.                    ++||+|||+||-+..       ...++---|++
T Consensus       649 gmaYLes-~nfVHrd~a~rNcLv~~e~--------------------~iKiadfgmsR~lysg~yy~vqgr~vlpiRwma  707 (807)
T KOG1094|consen  649 GMAYLES-LNFVHRDLATRNCLVDGEF--------------------TIKIADFGMSRNLYSGDYYRVQGRAVLPIRWMA  707 (807)
T ss_pred             HHHHHHh-hchhhccccccceeecCcc--------------------cEEecCcccccccccCCceeeecceeeeeeehh
Confidence            9999999 9999999999999999986                    899999999996654       22334445677


Q ss_pred             cc-ccCCCCCcHHHHHH
Q psy9184         481 EE-LFEGEGDYQFDMYR  496 (562)
Q Consensus       481 pe-lF~g~~~~q~dIy~  496 (562)
                      +| +..|.-...+|+|.
T Consensus       708 wEsillgkFttaSDvWa  724 (807)
T KOG1094|consen  708 WESILLGKFTTASDVWA  724 (807)
T ss_pred             HHHHHhccccchhhhhh
Confidence            66 45554444445443

>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases

Probab=99.83  E-value=1.7e-20  Score=188.44  Aligned_cols=184  Identities=21%  Similarity=0.281  Sum_probs=141.6

Q ss_pred             CceeeeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCccccccc
Q psy9184         263 LKNCKKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTELLK  336 (562)
Q Consensus       263 y~~~~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~l~~  336 (562)
                      |+..+.||+|+||.||+|      +.+|+|++....      ......+.+..|+.+++.++|                 
T Consensus         1 y~~~~~ig~g~~~~vy~~~~~~~~~~~~iK~~~~~~------~~~~~~~~~~~e~~~l~~~~~-----------------   57 (282)
T cd07829           1 YEKLEKLGEGTYGVVYKARDKKTGEIVALKKIRLDN------EEEGIPSTALREISLLKELKH-----------------   57 (282)
T ss_pred             CeeehcccccCcceEEEeeecCCCcEEEEEEecccc------ccccccHHHHHHHHHHHhcCC-----------------
Confidence            566789999999999999      889999998653      112233566789999999998                 


Q ss_pred             ccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc----cCCHHHHHHHHHHHHHHHHHH
Q psy9184         337 CSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK----YRSPNQTYAMILQVVFSLAVA  412 (562)
Q Consensus       337 ~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~----~l~e~~i~~I~~QIl~aL~yL  412 (562)
                               |+++++++++.+             .+..|+||||+. +++.+.+.    .+++..+..++.|++.||.||
T Consensus        58 ---------~~i~~~~~~~~~-------------~~~~~~v~e~~~-~~l~~~i~~~~~~~~~~~~~~~~~~i~~~l~~L  114 (282)
T cd07829          58 ---------PNIVKLLDVIHT-------------ERKLYLVFEYCD-MDLKKYLDKRPGPLSPNLIKSIMYQLLRGLAYC  114 (282)
T ss_pred             ---------CCHHHHHhhhhc-------------CCceEEEecCcC-cCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHH
Confidence                     999999999875             468999999997 45555442    478999999999999999999


Q ss_pred             HhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecCC-----cEEEeecCCCccccCCC
Q psy9184         413 EVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVGE-----KICYYDLSQDEELFEGE  487 (562)
Q Consensus       413 H~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~~-----g~v~~~l~~~pelF~g~  487 (562)
                      |+ .+|+||||+|+||+++.++                    .++|+|||+++.....     .......|++||.+.+.
T Consensus       115 H~-~~i~H~~l~~~ni~~~~~~--------------------~~~l~d~g~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~  173 (282)
T cd07829         115 HS-HRILHRDLKPQNILINRDG--------------------VLKLADFGLARAFGIPLRTYTHEVVTLWYRAPEILLGS  173 (282)
T ss_pred             HH-CCcccCCCChheEEEcCCC--------------------CEEEecCCcccccCCCccccCccccCcCcCChHHhcCC
Confidence            99 7999999999999999976                    7999999999876432     22334567899987653


Q ss_pred             --CCcHHHHHHHhhcccCCCCCCCCCCCh
Q psy9184         488 --GDYQFDMYRMMRKQCQNNWQNFTPKNN  514 (562)
Q Consensus       488 --~~~q~dIy~lm~~~~~~~W~~~~P~tn  514 (562)
                        ...+.|+|++. ......+.+..|++.
T Consensus       174 ~~~~~~~Dv~slG-~~l~~l~~~~~~~~~  201 (282)
T cd07829         174 KHYSTAVDIWSVG-CIFAEMITGKPLFPG  201 (282)
T ss_pred             cCCCccccHHHHH-HHHHHHHhCCCCCCC
Confidence              34558888753 322233344444443

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the

>KOG0199|consensus

Probab=99.83  E-value=6.5e-21  Score=207.04  Aligned_cols=214  Identities=16%  Similarity=0.202  Sum_probs=162.4

Q ss_pred             CCCCCceeeeeeccCceEEEEE---------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCC
Q psy9184         259 PSSALKNCKKIGEGVYGEVFKL---------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTP  329 (562)
Q Consensus       259 ~~~~y~~~~~LG~GsfG~Vyka---------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p  329 (562)
                      +.++..++++||+|+||.|++|         -.||||++.....       .....+|++|+.+|.+|.|          
T Consensus       108 pee~i~l~e~LG~GsFgvV~rg~Wt~psgk~V~VAVKclr~d~l-------~~~mddflrEas~M~~L~H----------  170 (1039)
T KOG0199|consen  108 PEEQIKLYELLGEGSFGVVKRGTWTQPSGKHVNVAVKCLRDDSL-------NAIMDDFLREASHMLKLQH----------  170 (1039)
T ss_pred             cHHHHHHHHHhcCcceeeEeeccccCCCCcEEeEEEEeccCCcc-------chhHHHHHHHHHHHHhccC----------
Confidence            4566788899999999999999         7999999986542       2256899999999999999          


Q ss_pred             cccccccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCcccccc-----CCHHHHHHHHHH
Q psy9184         330 CFTELLKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIKY-----RSPNQTYAMILQ  404 (562)
Q Consensus       330 ~fv~l~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~~-----l~e~~i~~I~~Q  404 (562)
                                      +|+++||++..+              ..+.+|||++++|+|++.+..     |.......++.|
T Consensus       171 ----------------~hliRLyGvVl~--------------qp~mMV~ELaplGSLldrLrka~~~~llv~~Lcdya~Q  220 (1039)
T KOG0199|consen  171 ----------------PHLIRLYGVVLD--------------QPAMMVFELAPLGSLLDRLRKAKKAILLVSRLCDYAMQ  220 (1039)
T ss_pred             ----------------cceeEEeeeecc--------------chhhHHhhhcccchHHHHHhhccccceeHHHHHHHHHH
Confidence                            999999998874              367899999999999998864     667888999999


Q ss_pred             HHHHHHHHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecCCcEEEe--e------
Q psy9184         405 VVFSLAVAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVGEKICYY--D------  476 (562)
Q Consensus       405 Il~aL~yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~~g~v~~--~------  476 (562)
                      |+.||.||.. .++|||||-..|+|+....                    .|||+||||.|.+....-.|.  +      
T Consensus       221 iA~aM~YLes-krlvHRDLAARNlllaspr--------------------tVKI~DFGLmRaLg~ned~Yvm~p~rkvPf  279 (1039)
T KOG0199|consen  221 IAKAMQYLES-KRLVHRDLAARNLLLASPR--------------------TVKICDFGLMRALGENEDMYVMAPQRKVPF  279 (1039)
T ss_pred             HHHHHHHHhh-hhhhhhhhhhhhheecccc--------------------eeeeecccceeccCCCCcceEecCCCcCcc
Confidence            9999999999 5999999999999999865                    799999999999876444331  1      


Q ss_pred             cCCCccccC-CCCCcHHHHHHH------hhcccCCCCCCCCCCChhhhHHHHHHHHhhcccCCCCCCCchhHHHHHHHH
Q psy9184         477 LSQDEELFE-GEGDYQFDMYRM------MRKQCQNNWQNFTPKNNVFWIHYLVDKATCLKKGYQYLRAPRHQAFELLEE  548 (562)
Q Consensus       477 l~~~pelF~-g~~~~q~dIy~l------m~~~~~~~W~~~~P~tn~~wl~yl~~~Ll~~~~~~~~~~~~~~~~~~~l~~  548 (562)
                      .|.+||-+. ..-...+|+|..      |.+.-++.|.+..+.        .+-+.++.+..++.+.......++.+++
T Consensus       280 AWCaPEsLrh~kFShaSDvWmyGVTiWEMFtyGEePW~G~~g~--------qIL~~iD~~erLpRPk~csedIY~imk~  350 (1039)
T KOG0199|consen  280 AWCAPESLRHRKFSHASDVWMYGVTIWEMFTYGEEPWVGCRGI--------QILKNIDAGERLPRPKYCSEDIYQIMKN  350 (1039)
T ss_pred             cccCHhHhccccccccchhhhhhhhHHhhhccCCCCCCCCCHH--------HHHHhccccccCCCCCCChHHHHHHHHH
Confidence            233444322 222333566543      444446778777553        2223344477778777777766555543

>KOG3653|consensus

Probab=99.83  E-value=8.7e-21  Score=199.41  Aligned_cols=173  Identities=21%  Similarity=0.237  Sum_probs=140.4

Q ss_pred             CCCceeeeeeccCceEEEEE----eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCccccccc
Q psy9184         261 SALKNCKKIGEGVYGEVFKL----NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTELLK  336 (562)
Q Consensus       261 ~~y~~~~~LG~GsfG~Vyka----~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~l~~  336 (562)
                      ...++...||+|.||.||+|    +.||||+++..           ..+.+.+|-.|.....                  
T Consensus       210 ~pl~l~eli~~Grfg~V~KaqL~~~~VAVKifp~~-----------~kqs~~~Ek~Iy~lp~------------------  260 (534)
T KOG3653|consen  210 DPLQLLELIGRGRFGCVWKAQLDNRLVAVKIFPEQ-----------EKQSFQNEKNIYSLPG------------------  260 (534)
T ss_pred             CchhhHHHhhcCccceeehhhccCceeEEEecCHH-----------HHHHHHhHHHHHhccC------------------
Confidence            45678899999999999999    99999999853           2356777777765432                  


Q ss_pred             ccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCcccccc--CCHHHHHHHHHHHHHHHHHHHh
Q psy9184         337 CSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIKY--RSPNQTYAMILQVVFSLAVAEV  414 (562)
Q Consensus       337 ~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~~--l~e~~i~~I~~QIl~aL~yLH~  414 (562)
                            -.|+||++++..-+...        . ....++||+||-+.|+|.+.++.  +++.+...++.-++.||+|||+
T Consensus       261 ------m~h~nIl~Fi~~ekr~t--------~-~~~eywLVt~fh~kGsL~dyL~~ntisw~~~cria~SmarGLa~LHe  325 (534)
T KOG3653|consen  261 ------MKHENILQFIGAEKRGT--------A-DRMEYWLVTEFHPKGSLCDYLKANTISWNSLCRIAESMARGLAHLHE  325 (534)
T ss_pred             ------ccchhHHHhhchhccCC--------c-cccceeEEeeeccCCcHHHHHHhccccHHHHHHHHHHHHHHHHHhcc
Confidence                  12499998886644211        0 13479999999999999888874  8999999999999999999997


Q ss_pred             h--------CCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecC-------CcEEEeecCC
Q psy9184         415 E--------LEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVG-------EKICYYDLSQ  479 (562)
Q Consensus       415 ~--------~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~-------~g~v~~~l~~  479 (562)
                      .        -.|+|||||..|||+..+.                    .+-|+|||||..+..       .|-++|.-||
T Consensus       326 e~p~~d~~Kp~IaHRDlkSkNVLvK~Dl--------------------TccIaDFGLAl~~~p~~~~~d~~~qVGT~RYM  385 (534)
T KOG3653|consen  326 ELPRGDHHKPPIAHRDLKSKNVLVKNDL--------------------TCCIADFGLALRLEPGKPQGDTHGQVGTRRYM  385 (534)
T ss_pred             cCCcCCCCCCccccccccccceEEccCC--------------------cEEeeccceeEEecCCCCCcchhhhhhhhhhc
Confidence            3        2399999999999999997                    799999999998875       4678899999


Q ss_pred             CccccCCCCCcH-------HHHHHH
Q psy9184         480 DEELFEGEGDYQ-------FDMYRM  497 (562)
Q Consensus       480 ~pelF~g~~~~q-------~dIy~l  497 (562)
                      +||++.|.-+.+       .|+|++
T Consensus       386 APEvLEgainl~d~~Afkr~DvYam  410 (534)
T KOG3653|consen  386 APEVLEGAINLQDRDAFKRIDVYAM  410 (534)
T ss_pred             CHHHHhhhcccccHHHHHHHHHHHH
Confidence            999999964443       788875

>PLN03225 Serine/threonine-protein kinase SNT7; Provisional

Probab=99.83  E-value=6.4e-20  Score=205.29  Aligned_cols=163  Identities=18%  Similarity=0.258  Sum_probs=110.4

Q ss_pred             CCCCCCceeeeeeccCceEEEEE----------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCC
Q psy9184         258 YPSSALKNCKKIGEGVYGEVFKL----------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENS  327 (562)
Q Consensus       258 ~~~~~y~~~~~LG~GsfG~Vyka----------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~  327 (562)
                      +..++|.+.++||+|+||.||+|          ..||+|.+....      .         .|+.+...+.+..      
T Consensus       129 ~~~~~y~l~~~LG~G~FG~VYka~~~~~~~~~~~~vAvK~~~~~~------~---------~e~~~~e~l~~~~------  187 (566)
T PLN03225        129 FKKDDFVLGKKLGEGAFGVVYKASLVNKQSKKEGKYVLKKATEYG------A---------VEIWMNERVRRAC------  187 (566)
T ss_pred             CccCCeEEeEEEeeCCCeEEEEEEEcCCccccCcEEEEEEecccc------h---------hHHHHHHHHHhhc------
Confidence            45578999999999999999999          369999876432      0         1112222222200      


Q ss_pred             CCcccccccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCcccccc---------------
Q psy9184         328 TPCFTELLKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIKY---------------  392 (562)
Q Consensus       328 ~p~fv~l~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~~---------------  392 (562)
                                       +.++..+...|....      . ...+..+|+||||+.+|++.+.+..               
T Consensus       188 -----------------~~~~~~~~~~~~~~~------~-~~~~~~~~LV~ey~~~gsL~~~l~~~~~~~~v~~~l~~~~  243 (566)
T PLN03225        188 -----------------PNSCADFVYGFLEPV------S-SKKEDEYWLVWRYEGESTLADLMQSKEFPYNVEPYLLGKV  243 (566)
T ss_pred             -----------------hhhHHHHHHhhhccc------c-cccCCceEEEEEecCCCcHHHHHHhcCCchhHHHHhccch
Confidence                             122333333332210      0 1235689999999999877655431               


Q ss_pred             --------CCHHHHHHHHHHHHHHHHHHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccce
Q psy9184         393 --------RSPNQTYAMILQVVFSLAVAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTIS  464 (562)
Q Consensus       393 --------l~e~~i~~I~~QIl~aL~yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLS  464 (562)
                              ..+..+..++.||+.||.|||+ .+|+||||||+|||++.+..                   .+||+|||+|
T Consensus       244 ~~l~~~~~r~~~~i~~i~~qll~aL~yLH~-~gIiHRDLKP~NILl~~~~~-------------------~~KL~DFGlA  303 (566)
T PLN03225        244 QDLPKGLERENKIIQTIMRQILFALDGLHS-TGIVHRDVKPQNIIFSEGSG-------------------SFKIIDLGAA  303 (566)
T ss_pred             hhccccchhhHHHHHHHHHHHHHHHHHHHH-CCEEeCcCCHHHEEEeCCCC-------------------cEEEEeCCCc
Confidence                    1134567899999999999999 79999999999999986432                   7999999999


Q ss_pred             eeecC------CcEEEeecCCCccccC
Q psy9184         465 RCFVG------EKICYYDLSQDEELFE  485 (562)
Q Consensus       465 r~~~~------~g~v~~~l~~~pelF~  485 (562)
                      +....      ...+.+..|++||.+.
T Consensus       304 ~~l~~~~~~~~~~~~~t~~Y~APE~~~  330 (566)
T PLN03225        304 ADLRVGINYIPKEFLLDPRYAAPEQYI  330 (566)
T ss_pred             cccccccccCCcccccCCCccChHHhh
Confidence            86532      2344567889999664

>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins

Probab=99.83  E-value=6.6e-20  Score=181.56  Aligned_cols=154  Identities=18%  Similarity=0.167  Sum_probs=122.0

Q ss_pred             cCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCcccccccccccCCCCC
Q psy9184         272 GVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTELLKCSCVRGRYP  345 (562)
Q Consensus       272 GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~l~~~~iv~g~~~  345 (562)
                      |.||.||+|      +.||+|.+....             ...+|...+....|                          
T Consensus         4 g~~~~v~~~~~~~~~~~~~~K~i~~~~-------------~~~~~~~~~~~~~~--------------------------   44 (237)
T cd05576           4 GVIDKVLLVMDTRTQQTFILKGLRKSS-------------EYSRERLTIIPHCV--------------------------   44 (237)
T ss_pred             cccceEEEEEEccCCcEEEEEeecchh-------------hhhhHHHHHHhcCC--------------------------
Confidence            899999999      789999998642             12234444444445                          


Q ss_pred             CCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc---cCCHHHHHHHHHHHHHHHHHHHhhCCeEecc
Q psy9184         346 DRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK---YRSPNQTYAMILQVVFSLAVAEVELEFEHRD  422 (562)
Q Consensus       346 pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~---~l~e~~i~~I~~QIl~aL~yLH~~~~IiHRD  422 (562)
                      |||+++++.+..             .+..|++|||+.||++.+.+.   .+++..+..++.|++.||.|||+ .+|+|||
T Consensus        45 ~~i~~~~~~~~~-------------~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~ql~~~l~~lH~-~~i~H~d  110 (237)
T cd05576          45 PNMVCLHKYIVS-------------EDSVFLVLQHAEGGKLWSHISKFLNIPEECVKRWAAEMVVALDALHR-EGIVCRD  110 (237)
T ss_pred             Cceeehhhheec-------------CCeEEEEEecCCCCCHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHh-CCeeccC
Confidence            999999998875             458999999999998877664   38899999999999999999999 7999999


Q ss_pred             CCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecCC--cEEEeecCCCccccCC-CCCcHHHHHHHh
Q psy9184         423 LHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVGE--KICYYDLSQDEELFEG-EGDYQFDMYRMM  498 (562)
Q Consensus       423 LKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~~--g~v~~~l~~~pelF~g-~~~~q~dIy~lm  498 (562)
                      |||+||+++.++                    .++|+|||++......  +...+..|++||...+ ..+...|+|++.
T Consensus       111 lkp~Nil~~~~~--------------------~~~l~df~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG  169 (237)
T cd05576         111 LNPNNILLDDRG--------------------HIQLTYFSRWSEVEDSCDGEAVENMYCAPEVGGISEETEACDWWSLG  169 (237)
T ss_pred             CCHHHEEEcCCC--------------------CEEEecccchhccccccccCCcCccccCCcccCCCCCCchhhHHHHH
Confidence            999999999886                    6999999988765542  2233456889998765 345568888753

Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha

>KOG0576|consensus

Probab=99.83  E-value=3.6e-21  Score=208.58  Aligned_cols=175  Identities=20%  Similarity=0.309  Sum_probs=148.7

Q ss_pred             CCCCCceeeeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCccc
Q psy9184         259 PSSALKNCKKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFT  332 (562)
Q Consensus       259 ~~~~y~~~~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv  332 (562)
                      |.++|+++.++|.|+||.||++      +..|+|+++....        ..+.-+..|+.+++.++|             
T Consensus        13 P~ddyellqrvgsgTygdvyKaRd~~s~elaavkvVkLep~--------dd~~~iqqei~~~~dc~h-------------   71 (829)
T KOG0576|consen   13 PQDDYELLQRVGSGTYGDVYKARDKRSGELAAVKVVKLEPG--------DDFSGIQQEIGMLRDCRH-------------   71 (829)
T ss_pred             CccchhheeeecCCcccchhhhcccccCchhhheeeeccCC--------ccccccccceeeeecCCC-------------
Confidence            6689999999999999999999      8999999998752        333456689999999998             


Q ss_pred             ccccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc---cCCHHHHHHHHHHHHHHH
Q psy9184         333 ELLKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK---YRSPNQTYAMILQVVFSL  409 (562)
Q Consensus       333 ~l~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~---~l~e~~i~~I~~QIl~aL  409 (562)
                                   |||+.+++.|..             .+.+|++||||.||++-+-+.   .+++.++.++.+..+.||
T Consensus        72 -------------~nivay~gsylr-------------~dklwicMEycgggslQdiy~~TgplselqiayvcRetl~gl  125 (829)
T KOG0576|consen   72 -------------PNIVAYFGSYLR-------------RDKLWICMEYCGGGSLQDIYHVTGPLSELQIAYVCRETLQGL  125 (829)
T ss_pred             -------------cChHHHHhhhhh-------------hcCcEEEEEecCCCcccceeeecccchhHHHHHHHhhhhccc
Confidence                         999999998875             568999999999997766553   599999999999999999


Q ss_pred             HHHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecC-----CcEEEeecCCCcccc
Q psy9184         410 AVAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVG-----EKICYYDLSQDEELF  484 (562)
Q Consensus       410 ~yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~-----~g~v~~~l~~~pelF  484 (562)
                      +|||+ +|-+|||||=.|||++..+                    .+|++|||.+..+..     ..-+++++|++||+-
T Consensus       126 ~ylhs-~gk~hRdiKGanilltd~g--------------------DvklaDfgvsaqitati~KrksfiGtpywmapEva  184 (829)
T KOG0576|consen  126 KYLHS-QGKIHRDIKGANILLTDEG--------------------DVKLADFGVSAQITATIAKRKSFIGTPYWMAPEVA  184 (829)
T ss_pred             hhhhc-CCcccccccccceeecccC--------------------ceeecccCchhhhhhhhhhhhcccCCccccchhHH
Confidence            99999 7999999999999999998                    699999999887664     456789999999974


Q ss_pred             C----CCCCcHHHHHHHhhcc
Q psy9184         485 E----GEGDYQFDMYRMMRKQ  501 (562)
Q Consensus       485 ~----g~~~~q~dIy~lm~~~  501 (562)
                      .    |.+...+|||...-+.
T Consensus       185 averkggynqlcdiwa~gitA  205 (829)
T KOG0576|consen  185 AVERKGGYNQLCDIWALGITA  205 (829)
T ss_pred             HHHhcccccccccccccccch
Confidence            3    3455559998765333

>KOG0670|consensus

Probab=99.82  E-value=7e-20  Score=193.88  Aligned_cols=236  Identities=17%  Similarity=0.207  Sum_probs=168.3

Q ss_pred             CCCCceeeeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCcccc
Q psy9184         260 SSALKNCKKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTE  333 (562)
Q Consensus       260 ~~~y~~~~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~  333 (562)
                      ..+|.+....|+|-||.|..|      ..||||+|....         -....=+.|+.||++|+..-.           
T Consensus       431 D~RY~V~~~~GkGvFs~Vvra~D~~r~~~vAiKIIRnNE---------~M~KtGl~EleiLkKL~~AD~-----------  490 (752)
T KOG0670|consen  431 DSRYEVQGYTGKGVFSTVVRARDQARGQEVAIKIIRNNE---------VMHKTGLKELEILKKLNDADP-----------  490 (752)
T ss_pred             cceeEEEeccccceeeeeeeccccCCCCeeEEEEeecch---------HHhhhhhHHHHHHHHhhccCc-----------
Confidence            468999999999999999999      899999998652         222344789999999986321           


Q ss_pred             cccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCcccccc------CCHHHHHHHHHHHHH
Q psy9184         334 LLKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIKY------RSPNQTYAMILQVVF  407 (562)
Q Consensus       334 l~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~~------l~e~~i~~I~~QIl~  407 (562)
                             +++  -|+++++..|..             .+++|||+|.+. -.|.+.++.      |....++.++.|++.
T Consensus       491 -------Edk--~Hclrl~r~F~h-------------knHLClVFE~Ls-lNLRevLKKyG~nvGL~ikaVRsYaqQLfl  547 (752)
T KOG0670|consen  491 -------EDK--FHCLRLFRHFKH-------------KNHLCLVFEPLS-LNLREVLKKYGRNVGLHIKAVRSYAQQLFL  547 (752)
T ss_pred             -------hhh--hHHHHHHHHhhh-------------cceeEEEehhhh-chHHHHHHHhCcccceeehHHHHHHHHHHH
Confidence                   111  368899988875             569999999874 234444432      778899999999999


Q ss_pred             HHHHHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecC------------------
Q psy9184         408 SLAVAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVG------------------  469 (562)
Q Consensus       408 aL~yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~------------------  469 (562)
                      ||..|.. |||+|.||||+|||++....                   .+||||||.|.....                  
T Consensus       548 ALklLK~-c~vlHaDIKPDNiLVNE~k~-------------------iLKLCDfGSA~~~~eneitPYLVSRFYRaPEIi  607 (752)
T KOG0670|consen  548 ALKLLKK-CGVLHADIKPDNILVNESKN-------------------ILKLCDFGSASFASENEITPYLVSRFYRAPEII  607 (752)
T ss_pred             HHHHHHh-cCeeecccCccceEeccCcc-------------------eeeeccCccccccccccccHHHHHHhccCccee
Confidence            9999999 99999999999999998864                   799999999977654                  


Q ss_pred             -------------CcEEEeecCCCccccCCCCCcH-HHHHHHhhcccC-----------CCC-----------C------
Q psy9184         470 -------------EKICYYDLSQDEELFEGEGDYQ-FDMYRMMRKQCQ-----------NNW-----------Q------  507 (562)
Q Consensus       470 -------------~g~v~~~l~~~pelF~g~~~~q-~dIy~lm~~~~~-----------~~W-----------~------  507 (562)
                                   .||.+|++|+|.-+|.|....+ -.++.-+.....           ..+           .      
T Consensus       608 LG~~yd~~iD~WSvgctLYElYtGkIlFpG~TNN~MLrl~me~KGk~p~KmlRKgqF~dqHFD~d~nf~~~e~D~vT~r~  687 (752)
T KOG0670|consen  608 LGLPYDYPIDTWSVGCTLYELYTGKILFPGRTNNQMLRLFMELKGKFPNKMLRKGQFKDQHFDQDLNFLYIEVDKVTERE  687 (752)
T ss_pred             ecCcccCCccceeeceeeEEeeccceecCCCCcHHHHHHHHHhcCCCcHHHhhhcchhhhhcccccceEEEeccccccce
Confidence                         6899999999999999976655 222222222110           000           0      


Q ss_pred             CCCCCChhhhHHHHHHHHhhcccCCCCCCCchhHHHHHHHHHHHhcCCCcCcCCC
Q psy9184         508 NFTPKNNVFWIHYLVDKATCLKKGYQYLRAPRHQAFELLEELGQNALHFDSCYEM  562 (562)
Q Consensus       508 ~~~P~tn~~wl~yl~~~Ll~~~~~~~~~~~~~~~~~~~l~~l~~~~l~~~s~~~~  562 (562)
                      ...+..|+---..+.+.|.. +..++...   ++.++.|..|.++||..+.+.++
T Consensus       688 ~~~vm~~vkPtkdl~s~l~~-~q~~~deq---~~~~~~~rdLLdkml~LdP~KRi  738 (752)
T KOG0670|consen  688 KRTVMVNVKPTKDLGSELIA-VQRLPDEQ---PKIVQQLRDLLDKMLILDPEKRI  738 (752)
T ss_pred             eEEEecccCcchhHHHHHhc-cCCCCchh---HHHHHHHHHHHHHHhccChhhcC
Confidence            11111222222344455555 33344332   34588888899999998887653

>KOG4278|consensus

Probab=99.82  E-value=2.5e-20  Score=200.01  Aligned_cols=210  Identities=20%  Similarity=0.191  Sum_probs=154.4

Q ss_pred             CCCceeeeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCccccc
Q psy9184         261 SALKNCKKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTEL  334 (562)
Q Consensus       261 ~~y~~~~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~l  334 (562)
                      .+.....+||-|.||+||.|      ..||||.++.+         ...+++|+.|..+|+.++|               
T Consensus       267 tdItMkhKLGGGQYGeVYeGvWKkyslTvAVKtLKED---------tMeveEFLkEAAvMKeikH---------------  322 (1157)
T KOG4278|consen  267 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED---------TMEVEEFLKEAAVMKEIKH---------------  322 (1157)
T ss_pred             hheeeeeccCCCcccceeeeeeeccceeeehhhhhhc---------chhHHHHHHHHHHHHhhcC---------------
Confidence            35567789999999999999      78999998754         4567899999999999999               


Q ss_pred             ccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCcccccc-----CCHHHHHHHHHHHHHHH
Q psy9184         335 LKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIKY-----RSPNQTYAMILQVVFSL  409 (562)
Q Consensus       335 ~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~~-----l~e~~i~~I~~QIl~aL  409 (562)
                                 ||+|+|++++..             +..+|||.|||..|.+|+++..     ++.-...+++.||..|+
T Consensus       323 -----------pNLVqLLGVCT~-------------EpPFYIiTEfM~yGNLLdYLRecnr~ev~avvLlyMAtQIsSaM  378 (1157)
T KOG4278|consen  323 -----------PNLVQLLGVCTH-------------EPPFYIITEFMCYGNLLDYLRECNRSEVPAVVLLYMATQISSAM  378 (1157)
T ss_pred             -----------ccHHHHhhhhcc-------------CCCeEEEEecccCccHHHHHHHhchhhcchhHHHHHHHHHHHHH
Confidence                       888888888865             4578999999999999999864     66667788999999999


Q ss_pred             HHHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecCC------cEEEeecCCCccc
Q psy9184         410 AVAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVGE------KICYYDLSQDEEL  483 (562)
Q Consensus       410 ~yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~~------g~v~~~l~~~pel  483 (562)
                      .||+. .+||||||-..|+|+..+.                    .|||+||||+|....+      |.-+---|++||-
T Consensus       379 eYLEk-knFIHRDLAARNCLVgEnh--------------------iVKvADFGLsRlMtgDTYTAHAGAKFPIKWTAPEs  437 (1157)
T KOG4278|consen  379 EYLEK-KNFIHRDLAARNCLVGENH--------------------IVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPES  437 (1157)
T ss_pred             HHHHH-hhhhhhhhhhhhccccccc--------------------eEEeeccchhhhhcCCceecccCccCcccccCccc
Confidence            99999 5999999999999999986                    7999999999988753      3333344667774


Q ss_pred             cCC-CCCcHHHHHHHhhccc-CCCCCCCCCCChhhhHHHHHHHHhhcccCCCCCCCchhHH
Q psy9184         484 FEG-EGDYQFDMYRMMRKQC-QNNWQNFTPKNNVFWIHYLVDKATCLKKGYQYLRAPRHQA  542 (562)
Q Consensus       484 F~g-~~~~q~dIy~lm~~~~-~~~W~~~~P~tn~~wl~yl~~~Ll~~~~~~~~~~~~~~~~  542 (562)
                      +.- +-..+.|+|.- |..+ +..--+..|+..+- |..+.. ||.++.+...+.....++
T Consensus       438 LAyNtFSiKSDVWAF-GVLLWEIATYGMsPYPGid-lSqVY~-LLEkgyRM~~PeGCPpkV  495 (1157)
T KOG4278|consen  438 LAYNTFSIKSDVWAF-GVLLWEIATYGMSPYPGID-LSQVYG-LLEKGYRMDGPEGCPPKV  495 (1157)
T ss_pred             ccccccccchhhHHH-HHHHHHHHhcCCCCCCCcc-HHHHHH-HHhccccccCCCCCCHHH
Confidence            432 34455777542 2222 11113455555443 444444 333244444544444443

>KOG4279|consensus

Probab=99.82  E-value=5.1e-20  Score=199.69  Aligned_cols=178  Identities=18%  Similarity=0.205  Sum_probs=141.2

Q ss_pred             eeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCccccccccccc
Q psy9184         267 KKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTELLKCSCV  340 (562)
Q Consensus       267 ~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~l~~~~iv  340 (562)
                      -+||+|+||+||-|      ...|||.|+...        ....+.+..||.+.+.|.|                     
T Consensus       581 vVLGKGTYG~VYA~RD~~tqvrIaIKEIpekd--------sr~~QPLhEEIaLH~~LrH---------------------  631 (1226)
T KOG4279|consen  581 VVLGKGTYGTVYAARDMDTQVRIAIKEIPEKD--------SREVQPLHEEIALHSTLRH---------------------  631 (1226)
T ss_pred             EEeecCceeEEEeeccccceeEEEeeeccccc--------chhhccHHHHHHHHHHHhh---------------------
Confidence            47999999999999      688999998653        3445677889999999998                     


Q ss_pred             CCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc----cC--CHHHHHHHHHHHHHHHHHHHh
Q psy9184         341 RGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK----YR--SPNQTYAMILQVVFSLAVAEV  414 (562)
Q Consensus       341 ~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~----~l--~e~~i~~I~~QIl~aL~yLH~  414 (562)
                           .|||++++.+-.             ++.+-|.||-++||++.+.+.    ++  ++..+-.+.+||++||.|||+
T Consensus       632 -----kNIVrYLGs~se-------------nGf~kIFMEqVPGGSLSsLLrskWGPlKDNEstm~fYtkQILeGLkYLHe  693 (1226)
T KOG4279|consen  632 -----KNIVRYLGSVSE-------------NGFFKIFMEQVPGGSLSSLLRSKWGPLKDNESTMNFYTKQILEGLKYLHE  693 (1226)
T ss_pred             -----HhHHHHhhccCC-------------CCeEEEEeecCCCCcHHHHHHhccCCCccchhHHHHHHHHHHHHhhhhhh
Confidence                 999999988754             668889999999998866553    34  789999999999999999999


Q ss_pred             hCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecCC-----cEEEeecCCCccccCC-C-
Q psy9184         415 ELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVGE-----KICYYDLSQDEELFEG-E-  487 (562)
Q Consensus       415 ~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~~-----g~v~~~l~~~pelF~g-~-  487 (562)
                       ..|||||||-+|+||+.-..                   .+||+|||-|+.+...     ...++--||+||+... . 
T Consensus       694 -n~IVHRDIKGDNVLvNTySG-------------------vlKISDFGTsKRLAginP~TETFTGTLQYMAPEvIDqG~R  753 (1226)
T KOG4279|consen  694 -NKIVHRDIKGDNVLVNTYSG-------------------VLKISDFGTSKRLAGINPCTETFTGTLQYMAPEVIDQGPR  753 (1226)
T ss_pred             -cceeeccccCCcEEEeeccc-------------------eEEecccccchhhccCCccccccccchhhhChHhhccCCc
Confidence             79999999999999987642                   7999999999987652     2234566899998764 2 


Q ss_pred             -CCcHHHHHHHhhcccCCCCCCCCCC
Q psy9184         488 -GDYQFDMYRMMRKQCQNNWQNFTPK  512 (562)
Q Consensus       488 -~~~q~dIy~lm~~~~~~~W~~~~P~  512 (562)
                       +...+|||+..-+.. ++=.+..||
T Consensus       754 GYG~aADIWS~GCT~v-EMATGrPPF  778 (1226)
T KOG4279|consen  754 GYGKAADIWSFGCTMV-EMATGRPPF  778 (1226)
T ss_pred             CCCchhhhhhccceeE-eeccCCCCe
Confidence             334489988755544 333444444

>KOG0664|consensus

Probab=99.82  E-value=5.3e-22  Score=196.21  Aligned_cols=172  Identities=22%  Similarity=0.409  Sum_probs=135.7

Q ss_pred             CceeeeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCccccccc
Q psy9184         263 LKNCKKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTELLK  336 (562)
Q Consensus       263 y~~~~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~l~~  336 (562)
                      .+--+.||-|+||.||.+      +.||+|.++.-.      ..-.....+.+|+.+|..++|                 
T Consensus        55 i~PDRPIGYGAFGVVWsVTDPRdgrrvalkK~pnvf------q~L~s~krvFre~kmLcfFkH-----------------  111 (449)
T KOG0664|consen   55 IQPDRPIGYGAFGVVWSVTDPRSGKRVALKKMPNVF------QNLASCKRVFREIKMLSSFRH-----------------  111 (449)
T ss_pred             CCCCCcccccceeEEEeccCCCCccchhHhhcchHH------HHHHHHHHHHHHHHHHHhhcc-----------------
Confidence            455689999999999988      889999887431      123345788999999999998                 


Q ss_pred             ccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc----cCCHHHHHHHHHHHHHHHHHH
Q psy9184         337 CSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK----YRSPNQTYAMILQVVFSLAVA  412 (562)
Q Consensus       337 ~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~----~l~e~~i~~I~~QIl~aL~yL  412 (562)
                               .|++.++++.+-      +++++|.  .+|.+.|++.  +++.++.    .++.+.++.++.||+.||.||
T Consensus       112 ---------dNVLSaLDILQP------ph~dfFq--EiYV~TELmQ--SDLHKIIVSPQ~Ls~DHvKVFlYQILRGLKYL  172 (449)
T KOG0664|consen  112 ---------DNVLSLLDILQP------ANPSFFQ--ELYVLTELMQ--SDLHKIIVSPQALTPDHVKVFVYQILRGLKYL  172 (449)
T ss_pred             ---------ccHHHHHHhcCC------CCchHHH--HHHHHHHHHH--hhhhheeccCCCCCcchhhhhHHHHHhhhHHH
Confidence                     888888877764      2244433  5789999995  6777764    488999999999999999999


Q ss_pred             HhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecC------CcEEEeecCCCccccCC
Q psy9184         413 EVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVG------EKICYYDLSQDEELFEG  486 (562)
Q Consensus       413 H~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~------~g~v~~~l~~~pelF~g  486 (562)
                      |+ .+|.||||||.|.|++.+.                    .+|||||||||....      ...+.+.+|.+||++.|
T Consensus       173 Hs-A~ILHRDIKPGNLLVNSNC--------------------vLKICDFGLARvee~d~~~hMTqEVVTQYYRAPEiLMG  231 (449)
T KOG0664|consen  173 HT-ANILHRDIKPGNLLVNSNC--------------------ILKICDFGLARTWDQRDRLNMTHEVVTQYYRAPELLMG  231 (449)
T ss_pred             hh-cchhhccCCCccEEeccCc--------------------eEEecccccccccchhhhhhhHHHHHHHHhccHHHhhc
Confidence            99 6999999999999999996                    899999999998765      22344667888888887


Q ss_pred             CCCcH--HHHHHH
Q psy9184         487 EGDYQ--FDMYRM  497 (562)
Q Consensus       487 ~~~~q--~dIy~l  497 (562)
                      ...|.  .|||+.
T Consensus       232 aRhYs~AvDiWSV  244 (449)
T KOG0664|consen  232 ARRYTGAVDIWSV  244 (449)
T ss_pred             chhhcCccceehh
Confidence            54444  666654

>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain

Probab=99.81  E-value=8.6e-20  Score=176.84  Aligned_cols=139  Identities=17%  Similarity=0.085  Sum_probs=99.3

Q ss_pred             eeeeeccCceEEEEE-----eeEEEEEeecCCCCCCcc------------------hhHHHHHHHHHHHHHHHhcCCccc
Q psy9184         266 CKKIGEGVYGEVFKL-----NNSVIKIMPIEGDQSVNG------------------EEQKKFREIFSEIMVTKETSDLQY  322 (562)
Q Consensus       266 ~~~LG~GsfG~Vyka-----~~vAIKii~~~~~~~~~~------------------~~~~~~~~il~Ei~ilk~L~h~~~  322 (562)
                      ...||+|+||.||+|     +.||||+++.........                  ..+........|+.+++.+.+.  
T Consensus         2 ~~~ig~G~~~~Vy~a~~~~g~~vAvKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~--   79 (190)
T cd05147           2 NGCISTGKEANVYHATTANGEERAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKSNPRKMVRTWAEKEMRNLKRLVTA--   79 (190)
T ss_pred             CCccccccceEEEEEECCCCCEEEEEEEEecccccccHHHhhcCCchhhccccCCCHHHHHHHHHHHHHHHHHHHHHC--
Confidence            468999999999999     799999998653211110                  0000112335699999999760  


Q ss_pred             cCCCCCCcccccccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCcccc---ccCCHHHHH
Q psy9184         323 RTENSTPCFTELLKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDI---KYRSPNQTY  399 (562)
Q Consensus       323 ~~~n~~p~fv~l~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l---~~l~e~~i~  399 (562)
                                         +..+|+++.                    ....+|||||++|+.+....   ..+++.++.
T Consensus        80 -------------------~v~~p~~~~--------------------~~~~~iVmE~i~g~~l~~~~~~~~~~~~~~~~  120 (190)
T cd05147          80 -------------------GIPCPEPIL--------------------LKSHVLVMEFIGDDGWAAPRLKDAPLSESKAR  120 (190)
T ss_pred             -------------------CCCCCcEEE--------------------ecCCEEEEEEeCCCCCcchhhhcCCCCHHHHH
Confidence                               000133221                    11238999999987554332   248889999


Q ss_pred             HHHHHHHHHHHHH-HhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeee
Q psy9184         400 AMILQVVFSLAVA-EVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCF  467 (562)
Q Consensus       400 ~I~~QIl~aL~yL-H~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~  467 (562)
                      .++.|++.+|.++ |+ .||+||||||+|||++. +                    .++|+|||+|...
T Consensus       121 ~i~~qi~~~L~~l~H~-~giiHrDlkP~NIli~~-~--------------------~v~LiDFG~a~~~  167 (190)
T cd05147         121 ELYLQVIQIMRILYQD-CRLVHADLSEYNLLYHD-G--------------------KLYIIDVSQSVEH  167 (190)
T ss_pred             HHHHHHHHHHHHHHHh-CCcccCCCCHHHEEEEC-C--------------------cEEEEEccccccC
Confidence            9999999999999 68 79999999999999984 3                    6999999998753

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c

>KOG1345|consensus

Probab=99.81  E-value=2.2e-19  Score=177.89  Aligned_cols=143  Identities=21%  Similarity=0.350  Sum_probs=124.3

Q ss_pred             CCCceeeeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCccccc
Q psy9184         261 SALKNCKKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTEL  334 (562)
Q Consensus       261 ~~y~~~~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~l  334 (562)
                      +.|.+.+.||+|-||.+.+|      ..+|+|.++..         .....++.+|...--.|.|               
T Consensus        24 d~y~I~k~lgeG~FgkIlL~eHr~s~t~ivlKavp~p---------~tt~~dF~rEfhY~~~Ls~---------------   79 (378)
T KOG1345|consen   24 DVYTINKQLGEGRFGKILLAEHRQSKTRIVLKAVPRP---------QTTQADFVREFHYSFFLSP---------------   79 (378)
T ss_pred             hhhhHHHHhcccceeeEEeeeccCCceEEEeeccCcc---------hhhHHHHHHHhccceeecc---------------
Confidence            56889999999999999999      89999999875         3456789999998888888               


Q ss_pred             ccccccCCCCCCCceeehhh-hhccccCCCCCCCCCCCCeEEEEEEecCCCCCcccccc--CCHHHHHHHHHHHHHHHHH
Q psy9184         335 LKCSCVRGRYPDRLVTLWEE-FAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIKY--RSPNQTYAMILQVVFSLAV  411 (562)
Q Consensus       335 ~~~~iv~g~~~pnIv~l~~~-f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~~--l~e~~i~~I~~QIl~aL~y  411 (562)
                                |.||+..|+. |+.             .+..+++|||++-|+|.+.+..  +.|.-...++.|+++|+.|
T Consensus        80 ----------H~hIi~tY~vaFqt-------------~d~YvF~qE~aP~gdL~snv~~~GigE~~~K~v~~ql~SAi~f  136 (378)
T KOG1345|consen   80 ----------HQHIIDTYEVAFQT-------------SDAYVFVQEFAPRGDLRSNVEAAGIGEANTKKVFAQLLSAIEF  136 (378)
T ss_pred             ----------chhhhHHHHHHhhc-------------CceEEEeeccCccchhhhhcCcccccHHHHHHHHHHHHHHHHH
Confidence                      8999999886 443             4578899999999999888865  7888999999999999999


Q ss_pred             HHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecC
Q psy9184         412 AEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVG  469 (562)
Q Consensus       412 LH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~  469 (562)
                      +|++ ++||||||.+||||-..+-                  .+|||||||+++....
T Consensus       137 MHsk-nlVHRdlK~eNiLif~~df------------------~rvKlcDFG~t~k~g~  175 (378)
T KOG1345|consen  137 MHSK-NLVHRDLKAENILIFDADF------------------YRVKLCDFGLTRKVGT  175 (378)
T ss_pred             hhcc-chhhcccccceEEEecCCc------------------cEEEeeecccccccCc
Confidence            9995 9999999999999987653                  2799999999987653

>KOG0196|consensus

Probab=99.81  E-value=8.2e-20  Score=200.88  Aligned_cols=173  Identities=22%  Similarity=0.241  Sum_probs=140.4

Q ss_pred             CCCCCCceeeeeeccCceEEEEE---------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCC
Q psy9184         258 YPSSALKNCKKIGEGVYGEVFKL---------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENST  328 (562)
Q Consensus       258 ~~~~~y~~~~~LG~GsfG~Vyka---------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~  328 (562)
                      +......+.++||.|.||+||+|         ..||||.++...       ..+...+|+.|+.||-+++|         
T Consensus       626 Id~s~i~Ie~VIGaGEFGEVc~GrLk~pgkre~~VAIKTLK~Gy-------tekqrrdFL~EAsIMGQFdH---------  689 (996)
T KOG0196|consen  626 IDPSCVKIEKVIGAGEFGEVCSGRLKLPGKREITVAIKTLKAGY-------TEKQRRDFLSEASIMGQFDH---------  689 (996)
T ss_pred             cChhheEEEEEEecccccceecccccCCCCcceeEEEeeeccCc-------cHHHHhhhhhhhhhcccCCC---------
Confidence            34456788999999999999999         799999999754       56777899999999999999         


Q ss_pred             CcccccccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc----cCCHHHHHHHHHH
Q psy9184         329 PCFTELLKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK----YRSPNQTYAMILQ  404 (562)
Q Consensus       329 p~fv~l~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~----~l~e~~i~~I~~Q  404 (562)
                                       |||++|-++...             ...+.||.|||++|.|-..+.    .|+..++..+++.
T Consensus       690 -----------------PNIIrLEGVVTk-------------s~PvMIiTEyMENGsLDsFLR~~DGqftviQLVgMLrG  739 (996)
T KOG0196|consen  690 -----------------PNIIRLEGVVTK-------------SKPVMIITEYMENGSLDSFLRQNDGQFTVIQLVGMLRG  739 (996)
T ss_pred             -----------------CcEEEEEEEEec-------------CceeEEEhhhhhCCcHHHHHhhcCCceEeehHHHHHHH
Confidence                             999999998875             447899999999995533332    3888899999999


Q ss_pred             HHHHHHHHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecCCc-EEEe-------e
Q psy9184         405 VVFSLAVAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVGEK-ICYY-------D  476 (562)
Q Consensus       405 Il~aL~yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~~g-~v~~-------~  476 (562)
                      |+.|+.||-+ ++.|||||-..|||++.+-                    .+|++||||||.+.++. ..++       -
T Consensus       740 IAsGMkYLsd-m~YVHRDLAARNILVNsnL--------------------vCKVsDFGLSRvledd~~~~ytt~GGKIPi  798 (996)
T KOG0196|consen  740 IASGMKYLSD-MNYVHRDLAARNILVNSNL--------------------VCKVSDFGLSRVLEDDPEAAYTTLGGKIPI  798 (996)
T ss_pred             HHHHhHHHhh-cCchhhhhhhhheeeccce--------------------EEEeccccceeecccCCCccccccCCccce
Confidence            9999999999 9999999999999999984                    89999999999886532 1111       2


Q ss_pred             cCCCccccCC-CCCcHHHHHHH
Q psy9184         477 LSQDEELFEG-EGDYQFDMYRM  497 (562)
Q Consensus       477 l~~~pelF~g-~~~~q~dIy~l  497 (562)
                      -|++||...- .-...+|+|+-
T Consensus       799 RWTAPEAIa~RKFTsASDVWSy  820 (996)
T KOG0196|consen  799 RWTAPEAIAYRKFTSASDVWSY  820 (996)
T ss_pred             eecChhHhhhcccCchhhcccc
Confidence            3667775443 23444777663

>KOG4257|consensus

Probab=99.80  E-value=5.2e-20  Score=198.02  Aligned_cols=141  Identities=23%  Similarity=0.323  Sum_probs=123.3

Q ss_pred             CCCceeeeeeccCceEEEEE----------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCc
Q psy9184         261 SALKNCKKIGEGVYGEVFKL----------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPC  330 (562)
Q Consensus       261 ~~y~~~~~LG~GsfG~Vyka----------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~  330 (562)
                      ....+.++||+|.||.||+|          -.||||..+.+-       .....+.|+.|..+|+.++|           
T Consensus       389 e~Itl~r~iG~GqFGdVy~gvYt~~~kge~iaVAvKtCK~d~-------t~d~tekflqEa~iMrnfdH-----------  450 (974)
T KOG4257|consen  389 ELITLKRLIGEGQFGDVYKGVYTDPEKGERIAVAVKTCKTDC-------TPDDTEKFLQEASIMRNFDH-----------  450 (974)
T ss_pred             hhccHHHhhcCCcccceeeeEecccccCcceeeeeehhccCC-------ChhhHHHHHHHHHHHHhCCC-----------
Confidence            45567789999999999999          579999988643       23346789999999999999           


Q ss_pred             ccccccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCcccccc----CCHHHHHHHHHHHH
Q psy9184         331 FTELLKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIKY----RSPNQTYAMILQVV  406 (562)
Q Consensus       331 fv~l~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~~----l~e~~i~~I~~QIl  406 (562)
                                     ||||++.+++.              +...|||||+++-|.+.+.++.    ++......++.||+
T Consensus       451 ---------------phIikLIGv~~--------------e~P~WivmEL~~~GELr~yLq~nk~sL~l~tL~ly~~Qi~  501 (974)
T KOG4257|consen  451 ---------------PHIIKLIGVCV--------------EQPMWIVMELAPLGELREYLQQNKDSLPLRTLTLYCYQIC  501 (974)
T ss_pred             ---------------cchhheeeeee--------------ccceeEEEecccchhHHHHHHhccccchHHHHHHHHHHHH
Confidence                           99999998886              4579999999999999887763    88888899999999


Q ss_pred             HHHHHHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecC
Q psy9184         407 FSLAVAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVG  469 (562)
Q Consensus       407 ~aL~yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~  469 (562)
                      .||+|||+ .++|||||-..|||+....                    -|||+||||||...+
T Consensus       502 talaYLeS-krfVHRDIAaRNiLVsSp~--------------------CVKLaDFGLSR~~ed  543 (974)
T KOG4257|consen  502 TALAYLES-KRFVHRDIAARNILVSSPQ--------------------CVKLADFGLSRYLED  543 (974)
T ss_pred             HHHHHHHh-hchhhhhhhhhheeecCcc--------------------eeeecccchhhhccc
Confidence            99999999 5999999999999999876                    599999999998876

>KOG1027|consensus

Probab=99.80  E-value=7.4e-20  Score=202.79  Aligned_cols=184  Identities=21%  Similarity=0.216  Sum_probs=143.1

Q ss_pred             eeeeeeccCceE-EEEE----eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCcccccccccc
Q psy9184         265 NCKKIGEGVYGE-VFKL----NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTELLKCSC  339 (562)
Q Consensus       265 ~~~~LG~GsfG~-Vyka----~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~l~~~~i  339 (562)
                      ..+.+|.|+-|+ ||+|    +.||||.+-.+           ...-+.+|+..|+.-+.                    
T Consensus       513 ~~eilG~Gs~Gt~Vf~G~ye~R~VAVKrll~e-----------~~~~A~rEi~lL~eSD~--------------------  561 (903)
T KOG1027|consen  513 PKEILGYGSNGTVVFRGVYEGREVAVKRLLEE-----------FFDFAQREIQLLQESDE--------------------  561 (903)
T ss_pred             cHHHcccCCCCcEEEEEeeCCceehHHHHhhH-----------hHHHHHHHHHHHHhccC--------------------
Confidence            346789998885 8999    99999988743           34567899999999887                    


Q ss_pred             cCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCcccccc--------CCHHHHHHHHHHHHHHHHH
Q psy9184         340 VRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIKY--------RSPNQTYAMILQVVFSLAV  411 (562)
Q Consensus       340 v~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~~--------l~e~~i~~I~~QIl~aL~y  411 (562)
                           |||||++|+.-++             ...+||++|+|..  .|+.+..        ......+.++.|++.||++
T Consensus       562 -----H~NviRyyc~E~d-------------~qF~YIalELC~~--sL~dlie~~~~d~~~~~~i~~~~~l~q~~~GlaH  621 (903)
T KOG1027|consen  562 -----HPNVIRYYCSEQD-------------RQFLYIALELCAC--SLQDLIESSGLDVEMQSDIDPISVLSQIASGLAH  621 (903)
T ss_pred             -----CCceEEEEeeccC-------------CceEEEEehHhhh--hHHHHHhccccchhhcccccHHHHHHHHHHHHHH
Confidence                 8999999987665             5689999999963  3333321        1124568899999999999


Q ss_pred             HHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecC--------CcEEEeecCCCccc
Q psy9184         412 AEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVG--------EKICYYDLSQDEEL  483 (562)
Q Consensus       412 LH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~--------~g~v~~~l~~~pel  483 (562)
                      ||+ ++||||||||+||||......               ....++|+|||+|+....        .|+-++..|+|||+
T Consensus       622 LHs-l~iVHRDLkPQNILI~~~~~~---------------~~~ra~iSDfglsKkl~~~~sS~~r~s~~sGt~GW~APE~  685 (903)
T KOG1027|consen  622 LHS-LKIVHRDLKPQNILISVPSAD---------------GTLRAKISDFGLSKKLAGGKSSFSRLSGGSGTSGWQAPEQ  685 (903)
T ss_pred             HHh-cccccccCCCceEEEEccCCC---------------cceeEEecccccccccCCCcchhhcccCCCCcccccCHHH
Confidence            999 999999999999999874210               114899999999998875        56778899999999


Q ss_pred             cCCCC-CcHHHHHHHhhcccCCCCCCCCCCChh
Q psy9184         484 FEGEG-DYQFDMYRMMRKQCQNNWQNFTPKNNV  515 (562)
Q Consensus       484 F~g~~-~~q~dIy~lm~~~~~~~W~~~~P~tn~  515 (562)
                      ..... ....|||++.....+-.-.+.+||-+.
T Consensus       686 L~~~~~~~avDiFslGCvfyYvltgG~HpFGd~  718 (903)
T KOG1027|consen  686 LREDRKTQAVDIFSLGCVFYYVLTGGSHPFGDS  718 (903)
T ss_pred             HhccccCcccchhhcCceEEEEecCCccCCCch
Confidence            88854 334899998887776666666776444

>KOG2052|consensus

Probab=99.79  E-value=3e-19  Score=186.70  Aligned_cols=171  Identities=19%  Similarity=0.283  Sum_probs=137.3

Q ss_pred             CCCceeeeeeccCceEEEEE----eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHH--hcCCccccCCCCCCccccc
Q psy9184         261 SALKNCKKIGEGVYGEVFKL----NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTK--ETSDLQYRTENSTPCFTEL  334 (562)
Q Consensus       261 ~~y~~~~~LG~GsfG~Vyka----~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk--~L~h~~~~~~n~~p~fv~l  334 (562)
                      ....+.+.||+|-||+||+|    +.||||++....        +   ..+.+|.+|.+  .|+|               
T Consensus       211 rqI~L~e~IGkGRyGEVwrG~wrGe~VAVKiF~srd--------E---~SWfrEtEIYqTvmLRH---------------  264 (513)
T KOG2052|consen  211 RQIVLQEIIGKGRFGEVWRGRWRGEDVAVKIFSSRD--------E---RSWFRETEIYQTVMLRH---------------  264 (513)
T ss_pred             heeEEEEEecCccccceeeccccCCceEEEEecccc--------h---hhhhhHHHHHHHHHhcc---------------
Confidence            56789999999999999999    999999998542        1   35667776655  4676               


Q ss_pred             ccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCcccccc--CCHHHHHHHHHHHHHHHHHH
Q psy9184         335 LKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIKY--RSPNQTYAMILQVVFSLAVA  412 (562)
Q Consensus       335 ~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~~--l~e~~i~~I~~QIl~aL~yL  412 (562)
                                 +||+.+...=....         -.-.++|||.+|-+.|+|++.+..  ++.+.+..++..++.||++|
T Consensus       265 -----------ENILgFIaaD~~~~---------gs~TQLwLvTdYHe~GSL~DyL~r~tv~~~~ml~LalS~AsGLaHL  324 (513)
T KOG2052|consen  265 -----------ENILGFIAADNKDN---------GSWTQLWLVTDYHEHGSLYDYLNRNTVTTEGMLKLALSIASGLAHL  324 (513)
T ss_pred             -----------chhhhhhhccccCC---------CceEEEEEeeecccCCcHHHHHhhccCCHHHHHHHHHHHhhhHHHH
Confidence                       88887775433211         124589999999999999999875  88899999999999999999


Q ss_pred             HhhC-------CeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecC---------CcEEEee
Q psy9184         413 EVEL-------EFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVG---------EKICYYD  476 (562)
Q Consensus       413 H~~~-------~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~---------~g~v~~~  476 (562)
                      |-+.       .|.|||||..|||+..++                    .+-|+|+|||.....         ..-++|-
T Consensus       325 H~eI~GTqgKPaIAHRDlKSKNILVKkn~--------------------~C~IADLGLAv~h~~~t~~idi~~N~rVGTK  384 (513)
T KOG2052|consen  325 HMEIVGTQGKPAIAHRDLKSKNILVKKNG--------------------TCCIADLGLAVRHDSDTDTIDIPPNPRVGTK  384 (513)
T ss_pred             HHHHhcCCCCchhhccccccccEEEccCC--------------------cEEEeeceeeEEecccCCcccCCCCCcccee
Confidence            9621       299999999999999998                    799999999987654         3456789


Q ss_pred             cCCCccccCCCCC------cH-HHHHHH
Q psy9184         477 LSQDEELFEGEGD------YQ-FDMYRM  497 (562)
Q Consensus       477 l~~~pelF~g~~~------~q-~dIy~l  497 (562)
                      -||+||++..+-.      |+ .|||+.
T Consensus       385 RYMAPEvLdetin~~~Fesyk~ADIYaf  412 (513)
T KOG2052|consen  385 RYMAPEVLDETINMKHFESYKRADIYAF  412 (513)
T ss_pred             eccChHHhhhhcChhhhhhhhHHHHHHH
Confidence            9999999987533      22 788774

>PLN03224 probable serine/threonine protein kinase; Provisional

Probab=99.79  E-value=6.4e-19  Score=193.97  Aligned_cols=179  Identities=18%  Similarity=0.206  Sum_probs=121.4

Q ss_pred             cCCCCCCceeeeeeccCceEEEEE----------------------eeEEEEEeecCCCCCCcchhHH----------HH
Q psy9184         257 RYPSSALKNCKKIGEGVYGEVFKL----------------------NNSVIKIMPIEGDQSVNGEEQK----------KF  304 (562)
Q Consensus       257 ~~~~~~y~~~~~LG~GsfG~Vyka----------------------~~vAIKii~~~~~~~~~~~~~~----------~~  304 (562)
                      .+..++|.+.++||+|+||.||+|                      +.||||.+.....    .....          ..
T Consensus       141 r~~~d~F~i~~~LG~GgFG~VYkG~~~~~~~~~v~~~~~~~~~~~~r~VAVK~l~~~~~----~~~~~fl~e~~~~~~~~  216 (507)
T PLN03224        141 RWSSDDFQLRDKLGGGNFGITFEGLRLQADDQGVTQRSKLTAEQKKRRVVLKRVNMDRQ----GVRQDFLKTGTLAKGSA  216 (507)
T ss_pred             CccccCceEeeEeecCCCeEEEEEEecccccchhhhhccccccccCceEEEEEecccch----hhHHHHHhhhhhhhccc
Confidence            345689999999999999999987                      2599999875431    00000          11


Q ss_pred             HHHHHHHHHHHhcCCccccCCCCCCcccccccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCC
Q psy9184         305 REIFSEIMVTKETSDLQYRTENSTPCFTELLKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGG  384 (562)
Q Consensus       305 ~~il~Ei~ilk~L~h~~~~~~n~~p~fv~l~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG  384 (562)
                      +....|+.++.++.|..    .                 .+.++++++++|.....     -..+..+..||||||+.+|
T Consensus       217 e~~~vE~~~l~~l~~~~----l-----------------~~~~~~~~lg~~~~~~~-----~g~~~~~~~~LV~Ey~~~g  270 (507)
T PLN03224        217 ETGMVEAYMCAKIKRNP----I-----------------AAASCAEYLGYFTSNTA-----DGAFTKGSQWLVWKFESDA  270 (507)
T ss_pred             chhHHHHHHHHHhhccc----c-----------------hhhhhhhhhhhcccccc-----cccccCCceEEEEEcCCCC
Confidence            22334666666666500    0                 01334555555543110     0112345789999999998


Q ss_pred             CCccccc---------------------------cCCHHHHHHHHHHHHHHHHHHHhhCCeEeccCCCCCEEEccCCCCC
Q psy9184         385 NDSGDIK---------------------------YRSPNQTYAMILQVVFSLAVAEVELEFEHRDLHMSNILVLQTDQDE  437 (562)
Q Consensus       385 ~ll~~l~---------------------------~l~e~~i~~I~~QIl~aL~yLH~~~~IiHRDLKpeNILl~~~~~~~  437 (562)
                      ++.+.+.                           .+++..++.++.|++.||.|||+ .+|+||||||+|||++.++   
T Consensus       271 sL~~~L~~~~~~~~~~L~e~l~~g~~l~~~~~~~~~~~~~~~~i~~ql~~aL~~lH~-~~ivHrDLKp~NILl~~~~---  346 (507)
T PLN03224        271 TLGDALDGKLGPFPGCLEEFMMAGKKIPDNMPQDKRDINVIKGVMRQVLTGLRKLHR-IGIVHRDIKPENLLVTVDG---  346 (507)
T ss_pred             cHHHHHhhccCCCcchHHHHHhcCCchhhhcccccCCHHHHHHHHHHHHHHHHHHHH-CCeecCCCchHhEEECCCC---
Confidence            7755432                           13567788999999999999999 7999999999999999876   


Q ss_pred             cccccCCcccccccCCceEEEEeccceeeecCC------cEEEeecCCCccccCC
Q psy9184         438 SSFTLDDTHYAMKTAGVQVTIIDFTISRCFVGE------KICYYDLSQDEELFEG  486 (562)
Q Consensus       438 ~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~~------g~v~~~l~~~pelF~g  486 (562)
                                       .++|+|||+++.....      ....++.|++||.+..
T Consensus       347 -----------------~~kL~DFGla~~~~~~~~~~~~~g~~tp~Y~aPE~l~~  384 (507)
T PLN03224        347 -----------------QVKIIDFGAAVDMCTGINFNPLYGMLDPRYSPPEELVM  384 (507)
T ss_pred             -----------------cEEEEeCcCccccccCCccCccccCCCcceeChhhhcC
Confidence                             7999999999764321      1122567889997654

>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain

Probab=99.79  E-value=8.6e-19  Score=169.36  Aligned_cols=141  Identities=16%  Similarity=0.076  Sum_probs=101.3

Q ss_pred             eeeeeccCceEEEEE-----eeEEEEEeecCCCCCCcc------------------hhHHHHHHHHHHHHHHHhcCCccc
Q psy9184         266 CKKIGEGVYGEVFKL-----NNSVIKIMPIEGDQSVNG------------------EEQKKFREIFSEIMVTKETSDLQY  322 (562)
Q Consensus       266 ~~~LG~GsfG~Vyka-----~~vAIKii~~~~~~~~~~------------------~~~~~~~~il~Ei~ilk~L~h~~~  322 (562)
                      ...||+|+||.||+|     +.||||++..........                  ...........|...+.++.+   
T Consensus         2 ~~~ig~G~~~~Vy~a~~~~g~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~---   78 (190)
T cd05145           2 NGCISTGKEANVYHARTGDGEELAVKIYKTSTLSFKDRDKYIEGDPRFRSRYSKSNPRKLVFAWAEKEFRNLKRLYE---   78 (190)
T ss_pred             CceeecCCCcEEEEEEcCCCCEEEEEEEEcCcceEeeHHHHhcCCcccccccccCCHHHHHHHHHHHHHHHHHHHHh---
Confidence            468999999999999     799999998753211000                  000011234578999999887   


Q ss_pred             cCCCCCCcccccccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccc-c--ccCCHHHHH
Q psy9184         323 RTENSTPCFTELLKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGD-I--KYRSPNQTY  399 (562)
Q Consensus       323 ~~~n~~p~fv~l~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~-l--~~l~e~~i~  399 (562)
                                             +++.....+.               ....||||||++|+.+... +  ..++..++.
T Consensus        79 -----------------------~~i~~p~~~~---------------~~~~~lVmE~~~g~~~~~~~l~~~~~~~~~~~  120 (190)
T cd05145          79 -----------------------AGVPVPEPIL---------------LKKNVLVMEFIGDDGSPAPRLKDVPLEEEEAE  120 (190)
T ss_pred             -----------------------CCCCCceEEE---------------ecCCEEEEEEecCCCchhhhhhhccCCHHHHH
Confidence                                   3332111111               1124899999998754333 2  237788999


Q ss_pred             HHHHHHHHHHHHHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeec
Q psy9184         400 AMILQVVFSLAVAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFV  468 (562)
Q Consensus       400 ~I~~QIl~aL~yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~  468 (562)
                      .++.|++.+|.++|...||+||||||+|||++ ++                    .++|+|||+|+...
T Consensus       121 ~i~~~l~~~l~~lH~~~givHrDlkP~NIll~-~~--------------------~~~liDFG~a~~~~  168 (190)
T cd05145         121 ELYEQVVEQMRRLYQEAGLVHGDLSEYNILYH-DG--------------------KPYIIDVSQAVELD  168 (190)
T ss_pred             HHHHHHHHHHHHHHHhCCEecCCCChhhEEEE-CC--------------------CEEEEEcccceecC
Confidence            99999999999999945999999999999998 44                    69999999998754

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro

>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional

Probab=99.79  E-value=4.7e-19  Score=209.70  Aligned_cols=164  Identities=18%  Similarity=0.133  Sum_probs=129.4

Q ss_pred             CCceeeeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCcccccc
Q psy9184         262 ALKNCKKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTELL  335 (562)
Q Consensus       262 ~y~~~~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~l~  335 (562)
                      .+...+.||+|+||.||+|      ..||+|.+....     .       ....|+.++++++|                
T Consensus       691 ~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~-----~-------~~~~~~~~l~~l~H----------------  742 (968)
T PLN00113        691 SLKEENVISRGKKGASYKGKSIKNGMQFVVKEINDVN-----S-------IPSSEIADMGKLQH----------------  742 (968)
T ss_pred             hCCcccEEccCCCeeEEEEEECCCCcEEEEEEccCCc-----c-------ccHHHHHHHhhCCC----------------
Confidence            3556678999999999999      689999887432     1       11246888999988                


Q ss_pred             cccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccccCCHHHHHHHHHHHHHHHHHHHhh
Q psy9184         336 KCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIKYRSPNQTYAMILQVVFSLAVAEVE  415 (562)
Q Consensus       336 ~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~~l~e~~i~~I~~QIl~aL~yLH~~  415 (562)
                                |||+++++++.+             ++..|+||||+++|++.+.+..+++.++..++.||+.||+|||..
T Consensus       743 ----------pnIv~~~~~~~~-------------~~~~~lv~Ey~~~g~L~~~l~~l~~~~~~~i~~~ia~~L~yLH~~  799 (968)
T PLN00113        743 ----------PNIVKLIGLCRS-------------EKGAYLIHEYIEGKNLSEVLRNLSWERRRKIAIGIAKALRFLHCR  799 (968)
T ss_pred             ----------CCcceEEEEEEc-------------CCCCEEEEeCCCCCcHHHHHhcCCHHHHHHHHHHHHHHHHHhccC
Confidence                      999999999875             457899999999998888887899999999999999999999931


Q ss_pred             --CCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeec-CCcEEEeecCCCccccCCC-CCcH
Q psy9184         416 --LEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFV-GEKICYYDLSQDEELFEGE-GDYQ  491 (562)
Q Consensus       416 --~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~-~~g~v~~~l~~~pelF~g~-~~~q  491 (562)
                        .+|+||||||+|||++.++                    .+++. ||.+.... ......+..|++||.+.+. .+.+
T Consensus       800 ~~~~iiH~dlkp~Nil~~~~~--------------------~~~~~-~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~  858 (968)
T PLN00113        800 CSPAVVVGNLSPEKIIIDGKD--------------------EPHLR-LSLPGLLCTDTKCFISSAYVAPETRETKDITEK  858 (968)
T ss_pred             CCCCeecCCCCHHhEEECCCC--------------------ceEEE-eccccccccCCCccccccccCcccccCCCCCcc
Confidence              4899999999999998775                    34443 56554332 2334556789999988763 5566


Q ss_pred             HHHHHH
Q psy9184         492 FDMYRM  497 (562)
Q Consensus       492 ~dIy~l  497 (562)
                      .|||+.
T Consensus       859 sDv~S~  864 (968)
T PLN00113        859 SDIYGF  864 (968)
T ss_pred             cchhhH
Confidence            899885

>KOG1290|consensus

Probab=99.77  E-value=9.4e-19  Score=184.61  Aligned_cols=153  Identities=20%  Similarity=0.265  Sum_probs=123.0

Q ss_pred             hhhcc-CccccccccCCCCCCceeeeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHh
Q psy9184         244 DICQQ-EDVVSFEDRYPSSALKNCKKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKE  316 (562)
Q Consensus       244 ~~~~q-~~~~~f~~~~~~~~y~~~~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~  316 (562)
                      .+|.. ..++..++.|..++|.+.++||=|.|++||+|      +.||+|+++..         +...+..+.||.+|+.
T Consensus        60 dY~kGGYHpV~IGD~F~~gRY~v~rKLGWGHFSTVWLawDtq~~r~VAlKVvKSA---------qhYtEaAlDEIklL~~  130 (590)
T KOG1290|consen   60 DYRKGGYHPVRIGDVFNGGRYHVQRKLGWGHFSTVWLAWDTQNKRYVALKVVKSA---------QHYTEAALDEIKLLQQ  130 (590)
T ss_pred             hhhcCCCceeeccccccCceEEEEEeccccccceeEEEeeccCCeEEEEEEEehh---------hHHHHHHHHHHHHHHH
Confidence            34433 45788888998899999999999999999999      89999999853         4555778899999999


Q ss_pred             cCCccccCCCCCCcccccccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCcccccc----
Q psy9184         317 TSDLQYRTENSTPCFTELLKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIKY----  392 (562)
Q Consensus       317 L~h~~~~~~n~~p~fv~l~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~~----  392 (562)
                      +..--.+..+                  ...||+|++.|...+      |   ++.++|+|+|++ |-.||..++.    
T Consensus       131 v~~~Dp~~~~------------------~~~VV~LlD~FkhsG------p---NG~HVCMVfEvL-GdnLLklI~~s~Yr  182 (590)
T KOG1290|consen  131 VREGDPNDPG------------------KKCVVQLLDHFKHSG------P---NGQHVCMVFEVL-GDNLLKLIKYSNYR  182 (590)
T ss_pred             HHhcCCCCCC------------------CceeeeeeccceecC------C---CCcEEEEEehhh-hhHHHHHHHHhCCC
Confidence            8762211111                  367889999888644      2   356899999998 2344555442    


Q ss_pred             -CCHHHHHHHHHHHHHHHHHHHhhCCeEeccCCCCCEEEccC
Q psy9184         393 -RSPNQTYAMILQVVFSLAVAEVELEFEHRDLHMSNILVLQT  433 (562)
Q Consensus       393 -l~e~~i~~I~~QIl~aL~yLH~~~~IiHRDLKpeNILl~~~  433 (562)
                       ++...++.|++||+.||.|||++|||||-||||+|||+..+
T Consensus       183 Glpl~~VK~I~~qvL~GLdYLH~ecgIIHTDlKPENvLl~~~  224 (590)
T KOG1290|consen  183 GLPLSCVKEICRQVLTGLDYLHRECGIIHTDLKPENVLLCST  224 (590)
T ss_pred             CCcHHHHHHHHHHHHHHHHHHHHhcCccccCCCcceeeeecc
Confidence             89999999999999999999999999999999999999765

>smart00221 STYKc Protein kinase; unclassified specificity

Probab=99.77  E-value=6e-18  Score=163.22  Aligned_cols=169  Identities=22%  Similarity=0.358  Sum_probs=136.2

Q ss_pred             CceeeeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCccccccc
Q psy9184         263 LKNCKKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTELLK  336 (562)
Q Consensus       263 y~~~~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~l~~  336 (562)
                      |.+.+.||.|+||.||++      +.+|+|.+.....       ......+.+|+..++.++|                 
T Consensus         1 ~~~~~~i~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~-------~~~~~~~~~e~~~~~~~~~-----------------   56 (225)
T smart00221        1 YELGKKLGEGAFGKVYLARDKGTGELVAVKVLKKEKT-------EKQREEFLREIRILKKLKH-----------------   56 (225)
T ss_pred             CceeeEeecCCCeEEEEEEEcCCCcEEEEEeeccccc-------hHHHHHHHHHHHHHHhCCC-----------------
Confidence            466789999999999999      6799999986531       1245688899999999987                 


Q ss_pred             ccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCcccccc----CCHHHHHHHHHHHHHHHHHH
Q psy9184         337 CSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIKY----RSPNQTYAMILQVVFSLAVA  412 (562)
Q Consensus       337 ~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~~----l~e~~i~~I~~QIl~aL~yL  412 (562)
                               ++++++++.+..             ....++++|++.++++.+.+..    +++..+..++.|++.+|.+|
T Consensus        57 ---------~~i~~~~~~~~~-------------~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~l  114 (225)
T smart00221       57 ---------PNIVKLYGVFED-------------PEPLYLVMEYCEGGDLFDYLRKKGGKLSEEEARFYLRQILEALEYL  114 (225)
T ss_pred             ---------CChhhheeeeec-------------CCceEEEEeccCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHH
Confidence                     899988887764             4579999999998877666542    78899999999999999999


Q ss_pred             HhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecCC------cEEEeecCCCccccC-
Q psy9184         413 EVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVGE------KICYYDLSQDEELFE-  485 (562)
Q Consensus       413 H~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~~------g~v~~~l~~~pelF~-  485 (562)
                      |+ ++++|+||+|.||+++..+                    .++|+|||++......      .......|++|+.+. 
T Consensus       115 h~-~~i~h~di~~~ni~v~~~~--------------------~~~l~d~g~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~  173 (225)
T smart00221      115 HS-LGIVHRDLKPENILLGMDG--------------------LVKLADFGLARFIHRDLAALLKTVKGTPFYLAPEVLLG  173 (225)
T ss_pred             Hh-CCeecCCCCHHHEEEcCCC--------------------CEEEeeCceeeEecCcccccccceeccCCcCCHhHhcC
Confidence            99 7999999999999999875                    7999999999887653      234455678888773 


Q ss_pred             C-CCCcHHHHHHHh
Q psy9184         486 G-EGDYQFDMYRMM  498 (562)
Q Consensus       486 g-~~~~q~dIy~lm  498 (562)
                      + ......|+|.+.
T Consensus       174 ~~~~~~~~Dv~~lG  187 (225)
T smart00221      174 GKGYGEAVDIWSLG  187 (225)
T ss_pred             CCCCCchhhHHHHH
Confidence            2 223357777653

Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.

>KOG0200|consensus

Probab=99.76  E-value=7e-18  Score=190.52  Aligned_cols=172  Identities=20%  Similarity=0.301  Sum_probs=138.0

Q ss_pred             CCCCCceeeeeeccCceEEEEE-------------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCC
Q psy9184         259 PSSALKNCKKIGEGVYGEVFKL-------------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTE  325 (562)
Q Consensus       259 ~~~~y~~~~~LG~GsfG~Vyka-------------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~  325 (562)
                      +..+..+.+.||+|+||.|++|             ..||||.++...       .....+.+..|+.+|+.+.+      
T Consensus       294 ~~~~l~~~~~lg~g~fG~v~~~~~~~~~~~~~~~~~~VaVK~~k~~~-------~~~~~~~~~~El~~m~~~g~------  360 (609)
T KOG0200|consen  294 PRENLKLGKYLGEGAFGQVVKALLFGLSKALLSIYVTVAVKMLKENA-------SSSEKKDLMSELNVLKELGK------  360 (609)
T ss_pred             chhhccccceeecccccceEeEEEeecccccccceEEEEEEeccccc-------CcHHHHHHHHHHHHHHHhcC------
Confidence            4455677789999999999999             478999988654       23556789999999999997      


Q ss_pred             CCCCcccccccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc--c-----------
Q psy9184         326 NSTPCFTELLKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK--Y-----------  392 (562)
Q Consensus       326 n~~p~fv~l~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~--~-----------  392 (562)
                                         ||||+.+.+....             .+.+++|+|||..|+++..+.  +           
T Consensus       361 -------------------H~niv~llG~~t~-------------~~~~~~v~Ey~~~G~L~~~Lr~~r~~~~~~~~~~~  408 (609)
T KOG0200|consen  361 -------------------HPNIVNLLGACTQ-------------DGPLYVIVEYAEHGDLLEFLRKKRVTESIDGSGVF  408 (609)
T ss_pred             -------------------Ccchhhheeeecc-------------CCceEEEEEeccCCcHHHHHHhccccccccccCCC
Confidence                               7999999988764             458999999999999877663  3           


Q ss_pred             ------CCHHHHHHHHHHHHHHHHHHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceee
Q psy9184         393 ------RSPNQTYAMILQVVFSLAVAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRC  466 (562)
Q Consensus       393 ------l~e~~i~~I~~QIl~aL~yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~  466 (562)
                            ++..+...+..||+.|++||++ .++|||||-..|||+..+.                    .+||+||||||.
T Consensus       409 ~~~~~~L~~~dLlsfa~QIa~GMe~L~~-~~~vHRDLAaRNVLi~~~~--------------------~~kIaDFGlar~  467 (609)
T KOG0200|consen  409 PNERDALTTKDLLSFAYQIANGMEYLAS-VPCVHRDLAARNVLITKNK--------------------VIKIADFGLARD  467 (609)
T ss_pred             ccccCCcCHHHHHHHHHHHHHHHHHHhh-CCccchhhhhhhEEecCCC--------------------EEEEccccceec
Confidence                  7788999999999999999999 6999999999999999986                    899999999996


Q ss_pred             ecCCcEE--------EeecCCCccccCC-CCCcHHHHHH
Q psy9184         467 FVGEKIC--------YYDLSQDEELFEG-EGDYQFDMYR  496 (562)
Q Consensus       467 ~~~~g~v--------~~~l~~~pelF~g-~~~~q~dIy~  496 (562)
                      .......        .---|++||-+.. ....+.|+|+
T Consensus       468 ~~~~~~y~~~~~~~~LP~kWmApEsl~~~~ft~kSDVWS  506 (609)
T KOG0200|consen  468 HYNKDYYRTKSSAGTLPVKWMAPESLFDRVFTSKSDVWS  506 (609)
T ss_pred             cCCCCceEecCCCCccceeecCHHHhccCcccccchhhH
Confidence            5432111        2223788885554 5555566655

>KOG1025|consensus

Probab=99.75  E-value=9.5e-19  Score=193.11  Aligned_cols=143  Identities=21%  Similarity=0.273  Sum_probs=125.5

Q ss_pred             CCCceeeeeeccCceEEEEE----------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCc
Q psy9184         261 SALKNCKKIGEGVYGEVFKL----------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPC  330 (562)
Q Consensus       261 ~~y~~~~~LG~GsfG~Vyka----------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~  330 (562)
                      ...+..++||.|+||+||+|          .+||+|++....       ..+...+++.|+-+|.+|+|           
T Consensus       696 telkk~kvLGsgAfGtV~kGiw~Pege~vKipVaiKvl~~~t-------~~~~s~e~LdeAl~masldH-----------  757 (1177)
T KOG1025|consen  696 TELKKDKVLGSGAFGTVYKGIWIPEGENVKIPVAIKVLIEFT-------SPKASIELLDEALRMASLDH-----------  757 (1177)
T ss_pred             hhhhhhceeccccceeEEeeeEecCCceecceeEEEEeeccC-------CchhhHHHHHHHHHHhcCCC-----------
Confidence            34567789999999999999          799999988654       24555789999999999999           


Q ss_pred             ccccccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCcccccc----CCHHHHHHHHHHHH
Q psy9184         331 FTELLKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIKY----RSPNQTYAMILQVV  406 (562)
Q Consensus       331 fv~l~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~~----l~e~~i~~I~~QIl  406 (562)
                                     ||+++++++...              ..+-||.+|+++|.|+++++.    +..+..+.|..||+
T Consensus       758 ---------------pnl~RLLgvc~~--------------s~~qlvtq~mP~G~LlDyvr~hr~~igsq~lLnw~~QIA  808 (1177)
T KOG1025|consen  758 ---------------PNLLRLLGVCML--------------STLQLVTQLMPLGCLLDYVREHRDNIGSQDLLNWCYQIA  808 (1177)
T ss_pred             ---------------chHHHHhhhccc--------------chHHHHHHhcccchHHHHHHHhhccccHHHHHHHHHHHH
Confidence                           999999998863              348899999999999998863    77889999999999


Q ss_pred             HHHHHHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecCCc
Q psy9184         407 FSLAVAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVGEK  471 (562)
Q Consensus       407 ~aL~yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~~g  471 (562)
                      .||.|||+ ++++||||-..|+|+..-+                    .+||.|||+|+.....+
T Consensus       809 kgM~YLe~-qrlVHrdLaaRNVLVksP~--------------------hvkitdfgla~ll~~d~  852 (1177)
T KOG1025|consen  809 KGMKYLEE-QRLVHRDLAARNVLVKSPN--------------------HVKITDFGLAKLLAPDE  852 (1177)
T ss_pred             HHHHHHHh-cchhhhhhhhhheeecCCC--------------------eEEEEecchhhccCccc
Confidence            99999999 7999999999999999886                    89999999999887643

>cd00180 PKc Catalytic domain of Protein Kinases

Probab=99.75  E-value=3.6e-17  Score=153.93  Aligned_cols=164  Identities=25%  Similarity=0.402  Sum_probs=132.8

Q ss_pred             eeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCcccccccccccCC
Q psy9184         269 IGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTELLKCSCVRG  342 (562)
Q Consensus       269 LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~l~~~~iv~g  342 (562)
                      ||+|++|.||++      +.+++|++.....       ......+.+|+.+++.+.|                       
T Consensus         1 l~~g~~~~v~~~~~~~~~~~~~~K~~~~~~~-------~~~~~~~~~e~~~~~~l~~-----------------------   50 (215)
T cd00180           1 LGEGGFGTVYLARDKKTGKKVAIKIIKKEDS-------SSLLEELLREIEILKKLNH-----------------------   50 (215)
T ss_pred             CCcCCceEEEEEEecCCCcEEEEEEeccccc-------hhHHHHHHHHHHHHHhcCC-----------------------
Confidence            689999999999      6799999986531       1134678899999999998                       


Q ss_pred             CCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc----cCCHHHHHHHHHHHHHHHHHHHhhCCe
Q psy9184         343 RYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK----YRSPNQTYAMILQVVFSLAVAEVELEF  418 (562)
Q Consensus       343 ~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~----~l~e~~i~~I~~QIl~aL~yLH~~~~I  418 (562)
                         ++++++++++..             ....+++||++.|+++.+.+.    .++...+..++.+++.+|.+||+ .++
T Consensus        51 ---~~i~~~~~~~~~-------------~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~-~~~  113 (215)
T cd00180          51 ---PNIVKLYGVFED-------------ENHLYLVMEYCEGGSLKDLLKENEGKLSEDEILRILLQILEGLEYLHS-NGI  113 (215)
T ss_pred             ---CCeeeEeeeeec-------------CCeEEEEEecCCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHh-CCe
Confidence               899999888864             358999999999887766553    37899999999999999999999 799


Q ss_pred             EeccCCCCCEEEcc-CCCCCcccccCCcccccccCCceEEEEeccceeeecCCc-----EEEeecCCCccccCC--CCCc
Q psy9184         419 EHRDLHMSNILVLQ-TDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVGEK-----ICYYDLSQDEELFEG--EGDY  490 (562)
Q Consensus       419 iHRDLKpeNILl~~-~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~~g-----~v~~~l~~~pelF~g--~~~~  490 (562)
                      +|+||+|.||+++. .+                    .++|+|||.+.......     ......|.+|+.+.+  ....
T Consensus       114 ~H~dl~~~ni~~~~~~~--------------------~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~  173 (215)
T cd00180         114 IHRDLKPENILLDSDNG--------------------KVKLADFGLSKLLTSDKSLLKTIVGTPAYMAPEVLLGKGYYSE  173 (215)
T ss_pred             eccCCCHhhEEEeCCCC--------------------cEEEecCCceEEccCCcchhhcccCCCCccChhHhcccCCCCc
Confidence            99999999999998 54                    79999999998775432     334666778888776  3445


Q ss_pred             HHHHHHHhh
Q psy9184         491 QFDMYRMMR  499 (562)
Q Consensus       491 q~dIy~lm~  499 (562)
                      ..|+|.+..
T Consensus       174 ~~D~~~lg~  182 (215)
T cd00180         174 KSDIWSLGV  182 (215)
T ss_pred             hhhhHHHHH
Confidence            578877543

Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which

>PRK10345 hypothetical protein; Provisional

Probab=99.75  E-value=5.6e-18  Score=166.81  Aligned_cols=144  Identities=15%  Similarity=0.091  Sum_probs=104.5

Q ss_pred             ceeeeeeccCceEEEEE---eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCccccccccccc
Q psy9184         264 KNCKKIGEGVYGEVFKL---NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTELLKCSCV  340 (562)
Q Consensus       264 ~~~~~LG~GsfG~Vyka---~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~l~~~~iv  340 (562)
                      .....||+|+||.||.-   ...+||++....        ....+.+.+|+.+++.+.|                     
T Consensus         5 ~~~~~LG~G~~~~Vy~hp~~~~k~IKv~~~~~--------~~~~~~~~rEi~~l~~L~~---------------------   55 (210)
T PRK10345          5 SEQSPLGTGRHRKCYAHPEDAQRCIKIVYHRG--------DGGDKEIRRELKYYAHLSR---------------------   55 (210)
T ss_pred             CCcceecCCCceEEEECCCCcCeEEEEEeccc--------cchHHHHHHHHHHHHHhhc---------------------
Confidence            44589999999999976   334688876542        1223578999999999965                     


Q ss_pred             CCCCCCCceeehhhhhccccCCCCCCCCCCCCeEE-EEEEe--cCCCCCcccccc--CCHHHHHHHHHHHHHHH-HHHHh
Q psy9184         341 RGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIF-IILEL--KNGGNDSGDIKY--RSPNQTYAMILQVVFSL-AVAEV  414 (562)
Q Consensus       341 ~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~-LVmE~--~~gG~ll~~l~~--l~e~~i~~I~~QIl~aL-~yLH~  414 (562)
                      .+..||||+++|+++++..          ..+.+| +||||  +.+|++.+.+..  +++.  ..++.|++.++ .|||+
T Consensus        56 ~~~~h~nIvr~yg~~et~~----------g~g~v~~~I~e~~G~~~~tL~~~l~~~~~~e~--~~~~~~~L~~l~~yLh~  123 (210)
T PRK10345         56 RLIDWSGIPRYYGTVETDC----------GTGYVYDVIADFDGKPSITLTEFAEQCRYEED--VAQLRQLLKKLKRYLLD  123 (210)
T ss_pred             cCCCCcccceeeEEEEeCC----------CCeEEEEEEecCCCCcchhHHHHHHcccccHh--HHHHHHHHHHHHHHHHH
Confidence            1122599999999998632          123444 78999  557877776653  4444  46688888888 99999


Q ss_pred             hCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEecccee
Q psy9184         415 ELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISR  465 (562)
Q Consensus       415 ~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr  465 (562)
                       ++|+||||||+|||++..+..                +..++|+||+.++
T Consensus       124 -~~IvhrDlKp~NILl~~~~~~----------------~~~~~LiDg~G~~  157 (210)
T PRK10345        124 -NRIVTMELKPQNILCQRISES----------------EVIPVVCDNIGES  157 (210)
T ss_pred             -CCEeecCCCHHHEEEeccCCC----------------CCcEEEEECCCCc
Confidence             799999999999999865321                1279999955443

>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain

Probab=99.74  E-value=2e-17  Score=160.35  Aligned_cols=218  Identities=20%  Similarity=0.200  Sum_probs=152.3

Q ss_pred             CceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCcccccccccccCCCCCC
Q psy9184         273 VYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTELLKCSCVRGRYPD  346 (562)
Q Consensus       273 sfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~l~~~~iv~g~~~p  346 (562)
                      +||.||+|      +.+|+|++.....       ....+.+.+|+.+++.++|                          +
T Consensus         1 ~~g~v~~~~~~~~~~~~~~k~~~~~~~-------~~~~~~~~~e~~~~~~l~~--------------------------~   47 (244)
T smart00220        1 SFGKVYLARDKKTGKLVAIKVIKKEKI-------KKKRERILREISILKKLKH--------------------------P   47 (244)
T ss_pred             CceEEEEEEECCCCcEEEEEEeccccc-------ccHHHHHHHHHHHHHhCCC--------------------------C
Confidence            58999999      6799999986531       1115688899999999987                          9


Q ss_pred             CceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCcccccc---CCHHHHHHHHHHHHHHHHHHHhhCCeEeccC
Q psy9184         347 RLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIKY---RSPNQTYAMILQVVFSLAVAEVELEFEHRDL  423 (562)
Q Consensus       347 nIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~~---l~e~~i~~I~~QIl~aL~yLH~~~~IiHRDL  423 (562)
                      +++++++.+..             ....+++||++.++++.+.+..   +++..+..++.|++.+|.|||+ .+|+|+||
T Consensus        48 ~i~~~~~~~~~-------------~~~~~l~~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~-~~i~h~~i  113 (244)
T smart00220       48 NIVRLYDVFED-------------EDKLYLVMEYCDGGDLFDLLKKRGRLSEDEARFYARQILSALEYLHS-NGIIHRDL  113 (244)
T ss_pred             cHHHHHhheee-------------CCEEEEEEeCCCCCCHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHH-cCeecCCc
Confidence            99999988864             4589999999998877665543   7899999999999999999999 79999999


Q ss_pred             CCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecCC----cEEEeecCCCccccCC-CCCcHHHHHHHh
Q psy9184         424 HMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVGE----KICYYDLSQDEELFEG-EGDYQFDMYRMM  498 (562)
Q Consensus       424 KpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~~----g~v~~~l~~~pelF~g-~~~~q~dIy~lm  498 (562)
                      +|.||+++.++                    .++|+|||++......    .......|.+||.+.+ ..+.+.|+|.+.
T Consensus       114 ~~~ni~~~~~~--------------------~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~pE~~~~~~~~~~~Di~slG  173 (244)
T smart00220      114 KPENILLDEDG--------------------HVKLADFGLARQLDPGGLLTTFVGTPEYMAPEVLLGKGYGKAVDVWSLG  173 (244)
T ss_pred             CHHHeEECCCC--------------------cEEEccccceeeeccccccccccCCcCCCCHHHHccCCCCchhhHHHHH
Confidence            99999999886                    7999999999887652    2334556778887764 455578998753


Q ss_pred             hcccCCCCCCCCCCChhhhHHHHHHHHhhcccCCCCCCCchhHHHHHHHHHHHhcCCCcCcCC
Q psy9184         499 RKQCQNNWQNFTPKNNVFWIHYLVDKATCLKKGYQYLRAPRHQAFELLEELGQNALHFDSCYE  561 (562)
Q Consensus       499 ~~~~~~~W~~~~P~tn~~wl~yl~~~Ll~~~~~~~~~~~~~~~~~~~l~~l~~~~l~~~s~~~  561 (562)
                       ......+.+..|+....-...+.+.+......+.....   .....+.++...++..+...|
T Consensus       174 -~~l~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~i~~~l~~~p~~R  232 (244)
T smart00220      174 -VILYELLTGKPPFPGDDQLLELFKKIGKPKPPFPPPEW---KISPEAKDLIRKLLVKDPEKR  232 (244)
T ss_pred             -HHHHHHHhCCCCCCCCCcHHHHHHHHhccCCCCccccc---cCCHHHHHHHHHHccCCchhc
Confidence             23323344444443311122233333331111111100   023466777788887766554

Phosphotransferases. Serine or threonine-specific kinase subfamily.

>KOG0665|consensus

Probab=99.71  E-value=2.5e-18  Score=173.79  Aligned_cols=176  Identities=20%  Similarity=0.281  Sum_probs=132.8

Q ss_pred             CCCCceeeeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCcccc
Q psy9184         260 SSALKNCKKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTE  333 (562)
Q Consensus       260 ~~~y~~~~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~  333 (562)
                      ..+|..++.+|.|+- .|..|      +.||+|.+....      .......+..+|..++..++|              
T Consensus        16 ~~Ry~nL~p~~~g~~-~v~~a~D~v~~~~v~ikk~~~pf------~n~~~akra~rel~l~~~v~~--------------   74 (369)
T KOG0665|consen   16 PKRYVNLKPIGSGAQ-IVVAAFDQVLGRPVAIKKLSRPF------QNQTHAKRAYRELKLMKCVNH--------------   74 (369)
T ss_pred             eeeeeeecccCCCCc-eEEecchhhccCceehhhhcCcc------ccCccchhhhhhhhhhhhhcc--------------
Confidence            357888999999988 56666      899999887652      123444677899999999999              


Q ss_pred             cccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCcccc-ccCCHHHHHHHHHHHHHHHHHH
Q psy9184         334 LLKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDI-KYRSPNQTYAMILQVVFSLAVA  412 (562)
Q Consensus       334 l~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l-~~l~e~~i~~I~~QIl~aL~yL  412 (562)
                                  +||++++.+|.-.+.       ...-...|+|||++.+ ++...+ ..++=..+..|+.|++.|+.||
T Consensus        75 ------------~nii~l~n~ftP~~~-------l~~~~e~y~v~e~m~~-nl~~vi~~elDH~tis~i~yq~~~~ik~l  134 (369)
T KOG0665|consen   75 ------------KNIISLLNVFTPQKT-------LEEFQEVYLVMELMDA-NLCQVILMELDHETISYILYQMLCGIKHL  134 (369)
T ss_pred             ------------cceeeeeeccCcccc-------HHHHHhHHHHHHhhhh-HHHHHHHHhcchHHHHHHHHHHHHHHHHH
Confidence                        999999988863210       0112368999999974 343333 2477788999999999999999


Q ss_pred             HhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecCC----cEEEeecCCCccccCCCC
Q psy9184         413 EVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVGE----KICYYDLSQDEELFEGEG  488 (562)
Q Consensus       413 H~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~~----g~v~~~l~~~pelF~g~~  488 (562)
                      |+ .||+||||||+||++..++                    .+||.|||+|+.....    ..+.+.+|.+||+..|.+
T Consensus       135 hs-~~IihRdLkPsnivv~~~~--------------------~lKi~dfg~ar~e~~~~~mtpyVvtRyyrapevil~~~  193 (369)
T KOG0665|consen  135 HS-AGIIHRDLKPSNIVVNSDC--------------------TLKILDFGLARTEDTDFMMTPYVVTRYYRAPEVILGMG  193 (369)
T ss_pred             Hh-cceeecccCcccceecchh--------------------heeeccchhhcccCcccccCchhheeeccCchheeccC
Confidence            99 7999999999999999997                    7999999999976542    234456677777766644


Q ss_pred             -CcHHHHHHH
Q psy9184         489 -DYQFDMYRM  497 (562)
Q Consensus       489 -~~q~dIy~l  497 (562)
                       ....|||+.
T Consensus       194 ~ke~vdiwSv  203 (369)
T KOG0665|consen  194 YKENVDIWSV  203 (369)
T ss_pred             Ccccchhhhh
Confidence             222666664

>PRK14879 serine/threonine protein kinase; Provisional

Probab=99.70  E-value=6.3e-17  Score=157.41  Aligned_cols=138  Identities=16%  Similarity=0.158  Sum_probs=102.2

Q ss_pred             eeeeccCceEEEEE----eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCcccccccccccCC
Q psy9184         267 KKIGEGVYGEVFKL----NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTELLKCSCVRG  342 (562)
Q Consensus       267 ~~LG~GsfG~Vyka----~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~l~~~~iv~g  342 (562)
                      +.||+|++|.||+|    ..+++|+...................+.+|+.++..+.+                       
T Consensus         2 ~~l~~G~~~~vy~~~~~~~~~~vK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~-----------------------   58 (211)
T PRK14879          2 KLIKRGAEAEIYLGDFLGIKAVIKWRIPKRYRHPELDERIRRERTRREARIMSRARK-----------------------   58 (211)
T ss_pred             cccccCceEEEEEEeeCCCceEEEEeCCcCCcChHHHHHHHHHHHHHHHHHHHHHHH-----------------------
Confidence            67999999999999    789999866432111011111223567889999999987                       


Q ss_pred             CCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccccCCHHHHHHHHHHHHHHHHHHHhhCCeEecc
Q psy9184         343 RYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIKYRSPNQTYAMILQVVFSLAVAEVELEFEHRD  422 (562)
Q Consensus       343 ~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~~l~e~~i~~I~~QIl~aL~yLH~~~~IiHRD  422 (562)
                         +++.....++..             .+..+++|||++|+++.+.+..... ....++.+++.+|.++|+ .+++|||
T Consensus        59 ---~~i~~p~~~~~~-------------~~~~~lv~e~~~G~~L~~~~~~~~~-~~~~i~~~i~~~l~~lH~-~~i~H~D  120 (211)
T PRK14879         59 ---AGVNVPAVYFVD-------------PENFIIVMEYIEGEPLKDLINSNGM-EELELSREIGRLVGKLHS-AGIIHGD  120 (211)
T ss_pred             ---CCCCCCeEEEEe-------------CCCCEEEEEEeCCcCHHHHHHhccH-HHHHHHHHHHHHHHHHHh-CCcccCC
Confidence               444332222222             3467899999998877665544444 788999999999999999 7999999


Q ss_pred             CCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceee
Q psy9184         423 LHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRC  466 (562)
Q Consensus       423 LKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~  466 (562)
                      ++|+|||++ .+                    .++|+|||+++.
T Consensus       121 l~p~Nil~~-~~--------------------~~~liDf~~a~~  143 (211)
T PRK14879        121 LTTSNMILS-GG--------------------KIYLIDFGLAEF  143 (211)
T ss_pred             CCcccEEEE-CC--------------------CEEEEECCcccC
Confidence            999999998 33                    699999999876

>smart00090 RIO RIO-like kinase

Probab=99.70  E-value=1.2e-16  Score=160.16  Aligned_cols=143  Identities=15%  Similarity=0.058  Sum_probs=103.1

Q ss_pred             CCceeeeeeccCceEEEEE-------eeEEEEEeecCCCCCCcc---------------hh-HHHHHHHHHHHHHHHhcC
Q psy9184         262 ALKNCKKIGEGVYGEVFKL-------NNSVIKIMPIEGDQSVNG---------------EE-QKKFREIFSEIMVTKETS  318 (562)
Q Consensus       262 ~y~~~~~LG~GsfG~Vyka-------~~vAIKii~~~~~~~~~~---------------~~-~~~~~~il~Ei~ilk~L~  318 (562)
                      .|.+.+.||+|+||.||+|       +.||+|+++.......+.               .. ......+.+|+.+++.+.
T Consensus        29 ~~~i~~~Lg~G~~g~Vy~a~~~~~~g~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~L~~L~  108 (237)
T smart00090       29 LSAIGGCISTGKEANVYHALDFDGSGKERAVKIYRTGTLEFKRRDRYVDGDFRFKYRKINPRKLVRLWAEKEFRNLQRLY  108 (237)
T ss_pred             hHHhCCeeccCcceeEEEEEecCCCCcEEEEEEEEcCcceecchhhhcccchhhccCCCCHHHHHHHHHHHHHHHHHHHH
Confidence            4778899999999999999       699999998653210000               00 011234568999999997


Q ss_pred             CccccCCCCCCcccccccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCcccc-c--cCCH
Q psy9184         319 DLQYRTENSTPCFTELLKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDI-K--YRSP  395 (562)
Q Consensus       319 h~~~~~~n~~p~fv~l~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l-~--~l~e  395 (562)
                      +.                        ...+.+.++                 ....|+||||+.|+++.... .  .+..
T Consensus       109 ~~------------------------~i~~p~~~~-----------------~~~~~lV~E~~~g~~L~~~~~~~~~~~~  147 (237)
T smart00090      109 EA------------------------GVPVPKPIA-----------------WRRNVLVMEFIGGDGLPAPRLKDVEPEE  147 (237)
T ss_pred             hc------------------------CCCCCeeeE-----------------ecCceEEEEEecCCcccccccccCCcch
Confidence            50                        011222221                 12358999999987654433 1  2456


Q ss_pred             HHHHHHHHHHHHHHHHHHhhCC-eEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeee
Q psy9184         396 NQTYAMILQVVFSLAVAEVELE-FEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCF  467 (562)
Q Consensus       396 ~~i~~I~~QIl~aL~yLH~~~~-IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~  467 (562)
                      .++..++.||+.+|.+||+ .| |+||||||+|||++ ++                    .++|+|||+|...
T Consensus       148 ~~~~~i~~qi~~~l~~LH~-~g~iiH~Dikp~NIli~-~~--------------------~i~LiDFg~a~~~  198 (237)
T smart00090      148 EEEFELYDDILEEMRKLYK-EGELVHGDLSEYNILVH-DG--------------------KVVIIDVSQSVEL  198 (237)
T ss_pred             HHHHHHHHHHHHHHHHHHh-cCCEEeCCCChhhEEEE-CC--------------------CEEEEEChhhhcc
Confidence            6678999999999999999 79 99999999999998 43                    6999999998754

>KOG1163|consensus

Probab=99.69  E-value=1.8e-16  Score=155.17  Aligned_cols=143  Identities=17%  Similarity=0.250  Sum_probs=114.2

Q ss_pred             CCCCCceeeeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCccc
Q psy9184         259 PSSALKNCKKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFT  332 (562)
Q Consensus       259 ~~~~y~~~~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv  332 (562)
                      ..++|.++++||.|+||.+|.|      +.||||+-....     .     -.++..|..+...|.+             
T Consensus        13 v~gky~lvrkiGsGSFGdIy~~~~i~~ge~VAiK~Es~~a-----~-----hpqL~yEskvY~iL~~-------------   69 (341)
T KOG1163|consen   13 VGGKYKLVRKIGSGSFGDIYLGISITSGEEVAIKLESSKA-----K-----HPQLLYESKVYRILQG-------------   69 (341)
T ss_pred             eccceEEEEeecCCchhheeeeeeccCCceEEEEeecccC-----C-----CcchhHHHHHHHHhcc-------------
Confidence            4588999999999999999999      899999866442     1     1356789999999988             


Q ss_pred             ccccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc-----cCCHHHHHHHHHHHHH
Q psy9184         333 ELLKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK-----YRSPNQTYAMILQVVF  407 (562)
Q Consensus       333 ~l~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~-----~l~e~~i~~I~~QIl~  407 (562)
                                  ...|..+..++.+             .+.-.+||++.  |..++.+-     .++...+..++-|++.
T Consensus        70 ------------g~GiP~i~~y~~e-------------~~ynvlVMdLL--GPsLEdLfnfC~R~ftmkTvLMLaDQml~  122 (341)
T KOG1163|consen   70 ------------GVGIPHIRHYGTE-------------KDYNVLVMDLL--GPSLEDLFNFCSRRFTMKTVLMLADQMLS  122 (341)
T ss_pred             ------------CCCCchhhhhccc-------------cccceeeeecc--CccHHHHHHHHhhhhhHHhHHHHHHHHHH
Confidence                        2445555544443             34668999999  67777653     3888999999999999


Q ss_pred             HHHHHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecC
Q psy9184         408 SLAVAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVG  469 (562)
Q Consensus       408 aL~yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~  469 (562)
                      -++|+|. .++|||||||+|.|+.-....                 -.+.|+|||||+.+.+
T Consensus       123 RiEyvH~-r~fiHRDIKPdNFLMGlgrh~-----------------~kl~LIDFGLaKky~d  166 (341)
T KOG1163|consen  123 RIEYVHL-RNFIHRDIKPDNFLMGLGRHC-----------------NKLYLIDFGLAKKYRD  166 (341)
T ss_pred             HHHHHHh-hccccccCCccceeecccccc-----------------ceEEEEeccchhhhcc
Confidence            9999999 699999999999999765321                 1799999999998776

>PRK12274 serine/threonine protein kinase; Provisional

Probab=99.69  E-value=2e-16  Score=155.04  Aligned_cols=134  Identities=13%  Similarity=0.024  Sum_probs=99.6

Q ss_pred             ceeeeeeccCceEEEEE----eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCcccccccccc
Q psy9184         264 KNCKKIGEGVYGEVFKL----NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTELLKCSC  339 (562)
Q Consensus       264 ~~~~~LG~GsfG~Vyka----~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~l~~~~i  339 (562)
                      .....|+.|+||+||.+    ..++.+.+.....    ....-....+.+|+.+|+.|.|                    
T Consensus         5 ~~~~~l~~~~f~~v~~~~~~~~k~~~~~l~~~~~----~~~~~~~~l~~rE~~iL~~L~~--------------------   60 (218)
T PRK12274          5 AVNEPLKSDTFGRILLVRGGERKFVRRDLSAAPW----WLRGVAWWLARREALALRQLDG--------------------   60 (218)
T ss_pred             ccceeecCCCcceEEEeecCCceeeecccccchh----hhhhHHHHHHHHHHHHHHhcCC--------------------
Confidence            45688999999999999    6666665554320    0011112357899999999987                    


Q ss_pred             cCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccccCCHHHHHHHHHHHHHHHHHHHhhCCeE
Q psy9184         340 VRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIKYRSPNQTYAMILQVVFSLAVAEVELEFE  419 (562)
Q Consensus       340 v~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~~l~e~~i~~I~~QIl~aL~yLH~~~~Ii  419 (562)
                           ++++.+++++.                 ..|++|||+.|+++....   +. ....++.|++.+|.++|+ +||+
T Consensus        61 -----~~~vP~ll~~~-----------------~~~lvmeyI~G~~L~~~~---~~-~~~~~~~qi~~~L~~lH~-~GIv  113 (218)
T PRK12274         61 -----LPRTPRLLHWD-----------------GRHLDRSYLAGAAMYQRP---PR-GDLAYFRAARRLLQQLHR-CGVA  113 (218)
T ss_pred             -----CCCCCEEEEEc-----------------CEEEEEeeecCccHHhhh---hh-hhHHHHHHHHHHHHHHHH-CcCc
Confidence                 46777776531                 469999999977654322   11 224688999999999999 7999


Q ss_pred             eccC-CCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeec
Q psy9184         420 HRDL-HMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFV  468 (562)
Q Consensus       420 HRDL-KpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~  468 (562)
                      |||| ||+|||++.++                    .++|+|||+|....
T Consensus       114 HrDL~kp~NILv~~~g--------------------~i~LIDFG~A~~~~  143 (218)
T PRK12274        114 HNDLAKEANWLVQEDG--------------------SPAVIDFQLAVRGN  143 (218)
T ss_pred             cCCCCCcceEEEcCCC--------------------CEEEEECCCceecC
Confidence            9999 79999998776                    69999999998543

>KOG1167|consensus

Probab=99.68  E-value=2.8e-17  Score=171.33  Aligned_cols=137  Identities=23%  Similarity=0.278  Sum_probs=120.8

Q ss_pred             CCCceeeeeeccCceEEEEE---------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCcc
Q psy9184         261 SALKNCKKIGEGVYGEVFKL---------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCF  331 (562)
Q Consensus       261 ~~y~~~~~LG~GsfG~Vyka---------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~f  331 (562)
                      ..|..+++||+|+|+.||++         ..||+|.+....          ....+.+|+++|..+..            
T Consensus        36 ~~~~~v~kigeGsFssv~~a~~~~~~~~~~~valk~i~~ts----------~p~ri~~El~~L~~~gG------------   93 (418)
T KOG1167|consen   36 NAYKVVNKIGEGSFSSVYKATDIEQDTKRRYVALKAIYRTS----------SPSRILNELEMLYRLGG------------   93 (418)
T ss_pred             hhhhhhccccccchhhhhhhhHhhhccccceEeeeeccccc----------CchHHHHHHHHHHHhcc------------
Confidence            56889999999999999999         589999988653          12468999999999987            


Q ss_pred             cccccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccccCCHHHHHHHHHHHHHHHHH
Q psy9184         332 TELLKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIKYRSPNQTYAMILQVVFSLAV  411 (562)
Q Consensus       332 v~l~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~~l~e~~i~~I~~QIl~aL~y  411 (562)
                                   +.||+++.+.+..             +++..+||||.++-+..+.+..++..+++.+++.++.||.+
T Consensus        94 -------------~~ni~~~~~~~rn-------------nd~v~ivlp~~~H~~f~~l~~~l~~~~i~~Yl~~ll~Al~~  147 (418)
T KOG1167|consen   94 -------------SDNIIKLNGCFRN-------------NDQVAIVLPYFEHDRFRDLYRSLSLAEIRWYLRNLLKALAH  147 (418)
T ss_pred             -------------chhhhcchhhhcc-------------CCeeEEEecccCccCHHHHHhcCCHHHHHHHHHHHHHHhhh
Confidence                         5899999998875             77999999999877666666779999999999999999999


Q ss_pred             HHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEecccee
Q psy9184         412 AEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISR  465 (562)
Q Consensus       412 LH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr  465 (562)
                      +|. .|||||||||+|+|.+....                   .-.|+|||||.
T Consensus       148 ~h~-~GIvHRDiKpsNFL~n~~t~-------------------rg~LvDFgLA~  181 (418)
T KOG1167|consen  148 LHK-NGIVHRDIKPSNFLYNRRTQ-------------------RGVLVDFGLAQ  181 (418)
T ss_pred             hhc-cCccccCCCccccccccccC-------------------CceEEechhHH
Confidence            999 79999999999999998764                   67899999997

>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]

Probab=99.67  E-value=5.9e-16  Score=152.90  Aligned_cols=173  Identities=21%  Similarity=0.367  Sum_probs=139.5

Q ss_pred             CceeeeeeccCceEEEEE---eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCcccccccccc
Q psy9184         263 LKNCKKIGEGVYGEVFKL---NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTELLKCSC  339 (562)
Q Consensus       263 y~~~~~LG~GsfG~Vyka---~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~l~~~~i  339 (562)
                      |.+...||.|+||.||++   ..+|+|.+.....     ........+.+|+.++..+.|                    
T Consensus         2 ~~~~~~l~~g~~~~v~~~~~~~~~~~k~~~~~~~-----~~~~~~~~~~~e~~~~~~~~~--------------------   56 (384)
T COG0515           2 YRILRKLGEGSFGEVYLARDRKLVALKVLAKKLE-----SKSKEVERFLREIQILASLNH--------------------   56 (384)
T ss_pred             ceeEEeecCCCCeEEEEEEeccEEEEEeechhhc-----cchhHHHHHHHHHHHHHHccC--------------------
Confidence            677899999999999999   6789999987642     112345788999999999998                    


Q ss_pred             cCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc------cCCHHHHHHHHHHHHHHHHHHH
Q psy9184         340 VRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK------YRSPNQTYAMILQVVFSLAVAE  413 (562)
Q Consensus       340 v~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~------~l~e~~i~~I~~QIl~aL~yLH  413 (562)
                           |++++++++.+..             ....+++++++.++.+.+.+.      .++...+..++.|++.++.|+|
T Consensus        57 -----~~~i~~~~~~~~~-------------~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~H  118 (384)
T COG0515          57 -----PPNIVKLYDFFQD-------------EGSLYLVMEYVDGGSLEDLLKKIGRKGPLSESEALFILAQILSALEYLH  118 (384)
T ss_pred             -----CcceeeEEEEEec-------------CCEEEEEEecCCCCcHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHH
Confidence                 3489999988853             335899999999998774443      4788999999999999999999


Q ss_pred             hhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecC-----------CcEEEeecCCCcc
Q psy9184         414 VELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVG-----------EKICYYDLSQDEE  482 (562)
Q Consensus       414 ~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~-----------~g~v~~~l~~~pe  482 (562)
                      + .+++||||||+|||++..+.                   .++++|||+++....           ...+.+..|.+|+
T Consensus       119 ~-~~~~hrd~kp~nil~~~~~~-------------------~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~t~~~~~pe  178 (384)
T COG0515         119 S-KGIIHRDIKPENILLDRDGR-------------------VVKLIDFGLAKLLPDPGSTSSIPALPSTSVGTPGYMAPE  178 (384)
T ss_pred             h-CCeeccCCCHHHeeecCCCC-------------------eEEEeccCcceecCCCCccccccccccccccccccCCHH
Confidence            9 79999999999999998862                   599999999985543           2345677889999


Q ss_pred             ccCC----CCCcHHHHHHHh
Q psy9184         483 LFEG----EGDYQFDMYRMM  498 (562)
Q Consensus       483 lF~g----~~~~q~dIy~lm  498 (562)
                      .+.+    ......|+|.+.
T Consensus       179 ~~~~~~~~~~~~~~D~~s~g  198 (384)
T COG0515         179 VLLGLSLAYASSSSDIWSLG  198 (384)
T ss_pred             HhcCCCCCCCCchHhHHHHH
Confidence            8876    345558888543

>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional

Probab=99.67  E-value=2.9e-16  Score=156.19  Aligned_cols=145  Identities=16%  Similarity=0.191  Sum_probs=107.3

Q ss_pred             CCCCceeeeeeccCceEEEEE----eeEEEEEeecCCCCCCcchhHHHHHH------HHHHHHHHHhcCCccccCCCCCC
Q psy9184         260 SSALKNCKKIGEGVYGEVFKL----NNSVIKIMPIEGDQSVNGEEQKKFRE------IFSEIMVTKETSDLQYRTENSTP  329 (562)
Q Consensus       260 ~~~y~~~~~LG~GsfG~Vyka----~~vAIKii~~~~~~~~~~~~~~~~~~------il~Ei~ilk~L~h~~~~~~n~~p  329 (562)
                      .++|+.++.||.|+||.||++    ..+|||++....     ...+.....      +.+|+..+.++.|          
T Consensus        30 ~~~y~~~~~l~~~~f~~v~l~~~~~~~~iiKvf~~~~-----~~~~~~~~~f~~g~~~e~Ea~~l~rL~~----------   94 (232)
T PRK10359         30 SYNIKTIKVFRNIDDTKVSLIDTDYGKYILKVFAPKV-----KRTERFLKSFVKGDYYENLIVQTDRVRS----------   94 (232)
T ss_pred             hCceEEEEEecCCCceEEEEEecCCCcEEEEEechhc-----CchHHHHHhhhhhHHHHHHHHHHHHHHH----------
Confidence            478999999999999999999    789999997553     112333233      5789999999998          


Q ss_pred             cccccccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccccCCHHHHHHHHHHHHHHH
Q psy9184         330 CFTELLKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIKYRSPNQTYAMILQVVFSL  409 (562)
Q Consensus       330 ~fv~l~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~~l~e~~i~~I~~QIl~aL  409 (562)
                                      |+|....+++......     .+...+..+|+|||++|.++ ..+..+++    ....+++.+|
T Consensus        95 ----------------~GI~~~~d~~~~~~~~-----~~~~~~~~~lvmEyi~G~tL-~~~~~~~~----~~~~~i~~~l  148 (232)
T PRK10359         95 ----------------EGLASLNDFYLLAERK-----TLRYAHTYIMLIEYIEGVEL-NDMPEISE----DVKAKIKASI  148 (232)
T ss_pred             ----------------CCCCcceEeeeecccc-----cccccCCeEEEEEEECCccH-HHhhhccH----HHHHHHHHHH
Confidence                            6666665554431100     00124568999999997755 33333443    3466999999


Q ss_pred             HHHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeee
Q psy9184         410 AVAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCF  467 (562)
Q Consensus       410 ~yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~  467 (562)
                      ..+|+ .||+||||||+|||++.++                     ++|+|||.++..
T Consensus       149 ~~lH~-~gi~H~Dikp~Nili~~~g---------------------i~liDfg~~~~~  184 (232)
T PRK10359        149 ESLHQ-HGMVSGDPHKGNFIVSKNG---------------------LRIIDLSGKRCT  184 (232)
T ss_pred             HHHHH-cCCccCCCChHHEEEeCCC---------------------EEEEECCCcccc
Confidence            99999 7999999999999998763                     999999988654

>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated

Probab=99.67  E-value=1.3e-16  Score=177.68  Aligned_cols=140  Identities=19%  Similarity=0.168  Sum_probs=101.0

Q ss_pred             CCceeeeeeccCceEEEEE----eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCcccccccc
Q psy9184         262 ALKNCKKIGEGVYGEVFKL----NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTELLKC  337 (562)
Q Consensus       262 ~y~~~~~LG~GsfG~Vyka----~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~l~~~  337 (562)
                      .|...+.||+|+||.||++    ..+++|+.................+.+.+|+.+++.+.|                  
T Consensus       334 ~~~~~~~iG~G~~g~Vy~~~~~~~~~v~k~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~------------------  395 (535)
T PRK09605        334 RKIPDHLIGKGAEADIKKGEYLGRDAVIKERVPKGYRHPELDERLRTERTRAEARLLSEARR------------------  395 (535)
T ss_pred             ccCccceeccCCcEEEEEEeecCccceeEEEecccccchhHHHHHHHHHHHHHHHHHHhhcc------------------
Confidence            3456789999999999997    555665543221100001112234568899999999998                  


Q ss_pred             cccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccccCCHHHHHHHHHHHHHHHHHHHhhCC
Q psy9184         338 SCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIKYRSPNQTYAMILQVVFSLAVAEVELE  417 (562)
Q Consensus       338 ~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~~l~e~~i~~I~~QIl~aL~yLH~~~~  417 (562)
                              ++++....++..             ....++||||++|+++.+.+.     ....++.|++.+|.+||+ .+
T Consensus       396 --------~~i~~p~~~~~~-------------~~~~~lv~E~~~g~~L~~~l~-----~~~~~~~~i~~~L~~lH~-~g  448 (535)
T PRK09605        396 --------AGVPTPVIYDVD-------------PEEKTIVMEYIGGKDLKDVLE-----GNPELVRKVGEIVAKLHK-AG  448 (535)
T ss_pred             --------cCCCeeEEEEEe-------------CCCCEEEEEecCCCcHHHHHH-----HHHHHHHHHHHHHHHHHh-CC
Confidence                    555544332222             335789999999887655442     467899999999999999 79


Q ss_pred             eEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeee
Q psy9184         418 FEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCF  467 (562)
Q Consensus       418 IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~  467 (562)
                      |+||||||+|||++ ++                    .++|+|||+|+..
T Consensus       449 iiHrDlkp~NILl~-~~--------------------~~~liDFGla~~~  477 (535)
T PRK09605        449 IVHGDLTTSNFIVR-DD--------------------RLYLIDFGLGKYS  477 (535)
T ss_pred             CccCCCChHHEEEE-CC--------------------cEEEEeCcccccC
Confidence            99999999999993 33                    6999999999874

>KOG1164|consensus

Probab=99.66  E-value=8.6e-16  Score=160.43  Aligned_cols=145  Identities=27%  Similarity=0.333  Sum_probs=109.7

Q ss_pred             CCceeeeeeccCceEEEEE-------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCccccc
Q psy9184         262 ALKNCKKIGEGVYGEVFKL-------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTEL  334 (562)
Q Consensus       262 ~y~~~~~LG~GsfG~Vyka-------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~l  334 (562)
                      +|.+.++||+|+||.||+|       ..+|+|+......       ... ..+..|+.++..+... .    .       
T Consensus        19 ~~~i~~~iG~G~fG~V~~v~~~~~~~~~~a~K~e~~~~~-------~~~-~~l~~E~~vl~~l~~~-~----~-------   78 (322)
T KOG1164|consen   19 RYKLGKKIGEGGFGAVYLVSDKSEKNKEYAKKLEKKELG-------SKP-SVLKIEIQVLKKLEKK-N----G-------   78 (322)
T ss_pred             ceEEeeeccccCCceEEEEEecCCCCeeEEEEEEEeccc-------CCC-ccchhHHHHHHHHhhh-c----C-------
Confidence            7999999999999999999       2689998876431       111 1456788888888730 0    0       


Q ss_pred             ccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc------cCCHHHHHHHHHHHHHH
Q psy9184         335 LKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK------YRSPNQTYAMILQVVFS  408 (562)
Q Consensus       335 ~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~------~l~e~~i~~I~~QIl~a  408 (562)
                                .+++..+++.+..            .+..-|+||+++  |..+..+.      .++...+..|+.|++.+
T Consensus        79 ----------~~~~~~~~~~G~~------------~~~~~~iVM~l~--G~sL~dl~~~~~~~~fs~~T~l~ia~q~l~~  134 (322)
T KOG1164|consen   79 ----------PSHFPKLLDHGRS------------TEDFNFIVMSLL--GPSLEDLRKRNPPGRFSRKTVLRIAIQNLNA  134 (322)
T ss_pred             ----------CCCCCEEEEeccC------------CCceeEEEEecc--CccHHHHHHhCCCCCcCHhHHHHHHHHHHHH
Confidence                      1456666655521            245789999999  66766553      48899999999999999


Q ss_pred             HHHHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceee
Q psy9184         409 LAVAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRC  466 (562)
Q Consensus       409 L~yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~  466 (562)
                      |.++|+ .|++||||||+|+++.......               --.+.|+|||+|+.
T Consensus       135 l~~lH~-~G~iHRDiKp~N~~~g~~~~~~---------------~~~~~llDfGlar~  176 (322)
T KOG1164|consen  135 LEDLHS-KGFIHRDIKPENFVVGQSSRSE---------------VRTLYLLDFGLARR  176 (322)
T ss_pred             HHHHHh-cCcccCCcCHHHeeecCCCCcc---------------cceEEEEecCCCcc
Confidence            999999 7999999999999998764100               01699999999993

>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain

Probab=99.66  E-value=5.6e-16  Score=150.24  Aligned_cols=138  Identities=15%  Similarity=0.093  Sum_probs=99.8

Q ss_pred             CceeeeeeccCceEEEEE-----eeEEEEEeecCCCCCCcchh--------------HHHHHHHHHHHHHHHhcCCcccc
Q psy9184         263 LKNCKKIGEGVYGEVFKL-----NNSVIKIMPIEGDQSVNGEE--------------QKKFREIFSEIMVTKETSDLQYR  323 (562)
Q Consensus       263 y~~~~~LG~GsfG~Vyka-----~~vAIKii~~~~~~~~~~~~--------------~~~~~~il~Ei~ilk~L~h~~~~  323 (562)
                      |.+.+.||+|+||.||+|     +.||||+++...........              .........|+.++..+.+    
T Consensus        17 ~~~~~~i~~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~----   92 (198)
T cd05144          17 ESLGNQIGVGKESDVYLALDPDGNPVALKFHRLGRTSFRKVKRKRDYLGDRKHASWLYLSRLAAQKEFAALKALYE----   92 (198)
T ss_pred             hhcCCccccCcceEEEEEEcCCCCEEEEEEEecccchhhhhcchHHHHhccccchhHHHhHHHHHHHHHHHHHHHH----
Confidence            677899999999999999     79999998764311100000              0111235678888888876    


Q ss_pred             CCCCCCcccccccccccCCCCCCC--ceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccccCCHHHHHHH
Q psy9184         324 TENSTPCFTELLKCSCVRGRYPDR--LVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIKYRSPNQTYAM  401 (562)
Q Consensus       324 ~~n~~p~fv~l~~~~iv~g~~~pn--Iv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~~l~e~~i~~I  401 (562)
                                            ++  +...+                 .....++||||++|+++.....   ......+
T Consensus        93 ----------------------~~i~v~~~~-----------------~~~~~~lv~e~~~g~~L~~~~~---~~~~~~~  130 (198)
T cd05144          93 ----------------------EGFPVPKPI-----------------DWNRHAVVMEYIDGVELYRVRV---LEDPEEV  130 (198)
T ss_pred             ----------------------cCCCCCcee-----------------ecCCceEEEEEeCCcchhhccc---cccHHHH
Confidence                                  21  22111                 1234589999999875543221   1456778


Q ss_pred             HHHHHHHHHHHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeee
Q psy9184         402 ILQVVFSLAVAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCF  467 (562)
Q Consensus       402 ~~QIl~aL~yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~  467 (562)
                      +.+++.++.++|+ .||+||||||+||+++.++                    .++|+|||++...
T Consensus       131 ~~~i~~~l~~lh~-~gi~H~Dl~p~Nill~~~~--------------------~~~liDfg~~~~~  175 (198)
T cd05144         131 LDEILEEIVKAYK-HGIIHGDLSEFNILVDDDE--------------------KIYIIDWPQMVST  175 (198)
T ss_pred             HHHHHHHHHHHHH-CCCCcCCCCcccEEEcCCC--------------------cEEEEECCccccC
Confidence            9999999999999 7999999999999998765                    7999999999654

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom

>TIGR03724 arch_bud32 Kae1-associated kinase Bud32

Probab=99.66  E-value=4.3e-16  Score=150.32  Aligned_cols=135  Identities=17%  Similarity=0.157  Sum_probs=95.7

Q ss_pred             eeeccCceEEEEE----eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCcccccccccccCCC
Q psy9184         268 KIGEGVYGEVFKL----NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTELLKCSCVRGR  343 (562)
Q Consensus       268 ~LG~GsfG~Vyka----~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~l~~~~iv~g~  343 (562)
                      .||+|+||.||+|    ..+++|+...................+.+|+.++..+.+.         +             
T Consensus         1 ~ig~G~~~~vy~~~~~~~~~viK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~---------~-------------   58 (199)
T TIGR03724         1 LIAKGAEAIIYLGDFLGLKAVIKERVPKSYRHPELDERIRRERTRNEARLLSRARKA---------G-------------   58 (199)
T ss_pred             CCCCCceEEEEEeecCCccEEEEEecCCcCcCchHHHHHHHHHHHHHHHHHHHHHHC---------C-------------
Confidence            3899999999999    6999998654321100011122335678899999999870         0             


Q ss_pred             CCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccccCCHHHHHHHHHHHHHHHHHHHhhCCeEeccC
Q psy9184         344 YPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIKYRSPNQTYAMILQVVFSLAVAEVELEFEHRDL  423 (562)
Q Consensus       344 ~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~~l~e~~i~~I~~QIl~aL~yLH~~~~IiHRDL  423 (562)
                        -.+..++...               ++..+++|||++|+++.+.+....   . .++.|++.+|.+||+ .|++|||+
T Consensus        59 --i~~p~~~~~~---------------~~~~~lv~e~~~g~~l~~~~~~~~---~-~~~~~i~~~l~~lH~-~gi~H~Dl  116 (199)
T TIGR03724        59 --VNTPVVYDVD---------------PDNKTIVMEYIEGKPLKDVIEEGN---D-ELLREIGRLVGKLHK-AGIVHGDL  116 (199)
T ss_pred             --CCCCEEEEEE---------------CCCCEEEEEEECCccHHHHHhhcH---H-HHHHHHHHHHHHHHH-CCeecCCC
Confidence              1122222211               335689999999887655432211   1 789999999999999 79999999


Q ss_pred             CCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeee
Q psy9184         424 HMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCF  467 (562)
Q Consensus       424 KpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~  467 (562)
                      ||+|||++ .+                    .++++|||+++..
T Consensus       117 ~~~Nil~~-~~--------------------~~~liDfg~a~~~  139 (199)
T TIGR03724       117 TTSNIIVR-DD--------------------KLYLIDFGLGKYS  139 (199)
T ss_pred             CcceEEEE-CC--------------------cEEEEECCCCcCC
Confidence            99999998 43                    7999999998763

Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.

>cd05119 RIO RIO kinase family, catalytic domain

Probab=99.63  E-value=1.9e-15  Score=144.21  Aligned_cols=75  Identities=21%  Similarity=0.173  Sum_probs=60.2

Q ss_pred             eEEEEEEecCCCCCccc-cccCCH-HHHHHHHHHHHHHHHHHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccc
Q psy9184         373 QIFIILELKNGGNDSGD-IKYRSP-NQTYAMILQVVFSLAVAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMK  450 (562)
Q Consensus       373 ~l~LVmE~~~gG~ll~~-l~~l~e-~~i~~I~~QIl~aL~yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~  450 (562)
                      ..++||||++||..... +..... .++..++.|++.++.++|..++|+||||||+||+++ ++                
T Consensus        89 ~~~lv~e~~~g~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~lh~~~~ivH~Dl~p~Nili~-~~----------------  151 (187)
T cd05119          89 RHVLVMEFIGGDGIPAPRLKDVRLLEDPEELYDQILELMRKLYREAGLVHGDLSEYNILVD-DG----------------  151 (187)
T ss_pred             CCEEEEEEeCCCCccChhhhhhhhcccHHHHHHHHHHHHHHHhhccCcCcCCCChhhEEEE-CC----------------
Confidence            56999999998654322 222222 678899999999999999845999999999999999 44                


Q ss_pred             cCCceEEEEeccceeeec
Q psy9184         451 TAGVQVTIIDFTISRCFV  468 (562)
Q Consensus       451 ~~g~~vKL~DFGLSr~~~  468 (562)
                          .++|+|||.|+...
T Consensus       152 ----~~~liDfg~a~~~~  165 (187)
T cd05119         152 ----KVYIIDVPQAVEID  165 (187)
T ss_pred             ----cEEEEECccccccc
Confidence                79999999997653

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct

>KOG1165|consensus

Probab=99.60  E-value=3.7e-15  Score=151.60  Aligned_cols=143  Identities=18%  Similarity=0.259  Sum_probs=115.4

Q ss_pred             CCCceeeeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCccccc
Q psy9184         261 SALKNCKKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTEL  334 (562)
Q Consensus       261 ~~y~~~~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~l  334 (562)
                      -.|+++++||+|+||+.|.|      +.||||.-+...     .     ..++..|....+.|.+               
T Consensus        28 ~hyrVGkKIGeGsFG~lf~G~Nl~nne~VAIKfEPrkS-----~-----APQLrdEYr~YKlL~g---------------   82 (449)
T KOG1165|consen   28 PHYRVGKKIGEGSFGVLFLGKNLYNNEPVAIKFEPRKS-----E-----APQLRDEYRTYKLLGG---------------   82 (449)
T ss_pred             ccceeccccccCcceeeecccccccCceEEEEeccccC-----C-----cchHHHHHHHHHHHcC---------------
Confidence            46899999999999999999      999999877654     1     1356678999998887               


Q ss_pred             ccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCcccc-----ccCCHHHHHHHHHHHHHHH
Q psy9184         335 LKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDI-----KYRSPNQTYAMILQVVFSL  409 (562)
Q Consensus       335 ~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l-----~~l~e~~i~~I~~QIl~aL  409 (562)
                                .+.|...|.+-..             +-+-.||||+.  |..|+.+     ..|+.+.+..++.|++.-+
T Consensus        83 ----------~~GIP~vYYFGqe-------------G~~NiLVidLL--GPSLEDLFD~CgR~FSvKTV~miA~Qmi~ri  137 (449)
T KOG1165|consen   83 ----------TEGIPQVYYFGQE-------------GKYNILVIDLL--GPSLEDLFDLCGRRFSVKTVAMIAKQMITRI  137 (449)
T ss_pred             ----------CCCCCceeeeccc-------------cchhhhhhhhh--CcCHHHHHHHhcCcccHHhHHHHHHHHHHHH
Confidence                      3777777654443             33557999999  6666655     2599999999999999999


Q ss_pred             HHHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecC
Q psy9184         410 AVAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVG  469 (562)
Q Consensus       410 ~yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~  469 (562)
                      .|+|+ ..+|.|||||+|.||...+...-               -.+.|+|||+|+.+.+
T Consensus       138 e~vH~-k~LIYRDIKPdNFLIGrp~~k~~---------------n~IhiiDFGmAK~YrD  181 (449)
T KOG1165|consen  138 EYVHE-KDLIYRDIKPDNFLIGRPGTKDA---------------NVIHIIDFGMAKEYRD  181 (449)
T ss_pred             HHHHh-cceeecccCccceeecCCCCCCC---------------ceEEEEeccchhhhcC
Confidence            99999 69999999999999987653211               1689999999998876

>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family

Probab=99.55  E-value=4.8e-14  Score=126.96  Aligned_cols=132  Identities=20%  Similarity=0.180  Sum_probs=103.3

Q ss_pred             eeeeeeccCceEEEEE----eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCccccccccccc
Q psy9184         265 NCKKIGEGVYGEVFKL----NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTELLKCSCV  340 (562)
Q Consensus       265 ~~~~LG~GsfG~Vyka----~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~l~~~~iv  340 (562)
                      +.+.||.|.++.||++    ..+++|+.....     .     ...+..|+.+++.+.+.                    
T Consensus         2 ~~~~i~~g~~~~v~~~~~~~~~~~iK~~~~~~-----~-----~~~~~~e~~~~~~l~~~--------------------   51 (155)
T cd05120           2 SIKLLKGGLTNRVYLLGTKDEDYVLKINPSRE-----K-----GADREREVAILQLLARK--------------------   51 (155)
T ss_pred             cceecccccccceEEEEecCCeEEEEecCCCC-----c-----hhHHHHHHHHHHHHHHc--------------------
Confidence            3578999999999999    589999987542     1     34678899999999871                    


Q ss_pred             CCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccccCCHHHHHHHHHHHHHHHHHHHhh--CCe
Q psy9184         341 RGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIKYRSPNQTYAMILQVVFSLAVAEVE--LEF  418 (562)
Q Consensus       341 ~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~~l~e~~i~~I~~QIl~aL~yLH~~--~~I  418 (562)
                          ...+.+++..+..             .+..|++|||+.|+.+...    +......++.+++.+|+++|..  .++
T Consensus        52 ----~~~~p~~~~~~~~-------------~~~~~~v~e~~~g~~~~~~----~~~~~~~~~~~~~~~l~~lh~~~~~~i  110 (155)
T cd05120          52 ----GLPVPKVLASGES-------------DGWSYLLMEWIEGETLDEV----SEEEKEDIAEQLAELLAKLHQLPLLVL  110 (155)
T ss_pred             ----CCCCCeEEEEcCC-------------CCccEEEEEecCCeecccC----CHHHHHHHHHHHHHHHHHHhCCCceEE
Confidence                0455555555442             3578999999987755432    6677788999999999999982  159


Q ss_pred             EeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeee
Q psy9184         419 EHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCF  467 (562)
Q Consensus       419 iHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~  467 (562)
                      +|+||||+|||++..+                    .++++|||+++..
T Consensus       111 ~H~Dl~~~Nil~~~~~--------------------~~~l~Df~~~~~~  139 (155)
T cd05120         111 CHGDLHPGNILVDDGK--------------------ILGIIDWEYAGYG  139 (155)
T ss_pred             EecCCCcceEEEECCc--------------------EEEEEecccccCC
Confidence            9999999999999854                    7999999998753

The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves

>KOG1166|consensus

Probab=99.52  E-value=3.1e-14  Score=164.30  Aligned_cols=177  Identities=17%  Similarity=0.158  Sum_probs=127.4

Q ss_pred             CCCCceeeeeeccCceEEEEE-----eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCccccc
Q psy9184         260 SSALKNCKKIGEGVYGEVFKL-----NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTEL  334 (562)
Q Consensus       260 ~~~y~~~~~LG~GsfG~Vyka-----~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~l  334 (562)
                      ...|.+-+.||+|+||.||+|     +.||||+=+....++....           .+++.+|+-      ...      
T Consensus       697 ~~~~~I~~e~G~g~y~~vy~a~~~~~~~~alK~e~P~~~WEfYI~-----------~q~~~RLk~------~~~------  753 (974)
T KOG1166|consen  697 GEKFCISKEIGEGSYGSVYVATHSNGKLVALKVEKPPNPWEFYIC-----------LQVMERLKP------QML------  753 (974)
T ss_pred             ceeEEEEeeeccccceEEEEeecCCCcEEEEEeecCCCceeeeeh-----------HHHHHhhch------hhh------
Confidence            357889999999999999999     8999998776554332221           122333330      111      


Q ss_pred             ccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCcccccc---CCHHHHHHHHHHHHHHHHH
Q psy9184         335 LKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIKY---RSPNQTYAMILQVVFSLAV  411 (562)
Q Consensus       335 ~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~~---l~e~~i~~I~~QIl~aL~y  411 (562)
                                 +-|..+...+.             ..+.-+||+||.+.|++++.+..   +++..+..+..|++.-+..
T Consensus       754 -----------~~~~~~~~a~~-------------~~~~S~lv~ey~~~Gtlld~~N~~~~m~e~lv~~~~~qml~ive~  809 (974)
T KOG1166|consen  754 -----------PSIMHISSAHV-------------FQNASVLVSEYSPYGTLLDLINTNKVMDEYLVMFFSCQMLRIVEH  809 (974)
T ss_pred             -----------cchHHHHHHHc-------------cCCcceeeeeccccccHHHhhccCCCCCchhhhHHHHHHHHHHHH
Confidence                       23333333332             14467899999999999998853   8899999999999999999


Q ss_pred             HHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecC-------CcEEEeecCCCcccc
Q psy9184         412 AEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVG-------EKICYYDLSQDEELF  484 (562)
Q Consensus       412 LH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~-------~g~v~~~l~~~pelF  484 (562)
                      ||. ++|||+||||+|.||...-...             .....++|||||-|--...       .+.+.++++...|+.
T Consensus       810 lH~-~~IIHgDiKPDNfll~~~~~~~-------------~~~~~l~lIDfG~siDm~lfp~~~~F~~~~~td~f~C~EM~  875 (974)
T KOG1166|consen  810 LHA-MGIIHGDIKPDNFLLRREICAD-------------SDSKGLYLIDFGRSIDMKLFPDGTKFKAVWHTDLFDCIEMR  875 (974)
T ss_pred             HHh-cceecccCCcceeEeecccCCC-------------CcccceEEEecccceeeeEcCCCcEEeeeeccccchhHHHh
Confidence            999 8999999999999998763211             1123599999998865432       345557788888888


Q ss_pred             CCC-CCcHHHHHHH
Q psy9184         485 EGE-GDYQFDMYRM  497 (562)
Q Consensus       485 ~g~-~~~q~dIy~l  497 (562)
                      .|. -.||.|.|-+
T Consensus       876 ~grpWtYq~DyfGl  889 (974)
T KOG1166|consen  876 EGRPWTYQIDYFGL  889 (974)
T ss_pred             cCCCCchhhhhHHH
Confidence            884 5777666554

>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed

Probab=99.49  E-value=1.5e-13  Score=138.01  Aligned_cols=143  Identities=15%  Similarity=0.034  Sum_probs=92.3

Q ss_pred             eeee-ccCceEEEEE----eeEEEEEeecCCCC--C---CcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCccccccc
Q psy9184         267 KKIG-EGVYGEVFKL----NNSVIKIMPIEGDQ--S---VNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTELLK  336 (562)
Q Consensus       267 ~~LG-~GsfG~Vyka----~~vAIKii~~~~~~--~---~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~l~~  336 (562)
                      ..|| .|+.|+||.+    ..+|||.+.....-  .   ...........+.+|+.++..|.+         +|      
T Consensus        37 ~~lg~~~g~gtv~~v~~~~~~~vlk~~~r~~~i~kv~~~~~~~~~~~~~r~~rE~~ll~~L~~---------~g------  101 (239)
T PRK01723         37 RVVGSAKGRGTTWFVQTPGVNWVLRHYRRGGLIGKLSKDRYLFTGLERTRAFAEFRLLAQLYE---------AG------  101 (239)
T ss_pred             ceeecCCCCccEEEEEeCCceEEEEEeeEcchHHhhhhhcccccchhhhHHHHHHHHHHHHHh---------CC------
Confidence            4566 6666677666    78999988653210  0   000011223567889999999988         11      


Q ss_pred             ccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCcccc-cc--CCHHHHHHHHHHHHHHHHHHH
Q psy9184         337 CSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDI-KY--RSPNQTYAMILQVVFSLAVAE  413 (562)
Q Consensus       337 ~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l-~~--l~e~~i~~I~~QIl~aL~yLH  413 (562)
                               ..++..+.......      .   .....++|||+++|+.++..+ ..  +++.    .+.||+.+|.+||
T Consensus       102 ---------i~vP~pl~~~~~~~------~---~~~~~~lV~e~l~G~~~L~~~l~~~~l~~~----~~~~i~~~l~~lH  159 (239)
T PRK01723        102 ---------LPVPRPIAARVVRH------G---LFYRADILIERIEGARDLVALLQEAPLSEE----QWQAIGQLIARFH  159 (239)
T ss_pred             ---------CCCceeEeeeeeec------C---cceeeeEEEEecCCCCCHHHHHhcCCCCHH----HHHHHHHHHHHHH
Confidence                     11233333222110      0   011346999999985554433 22  3333    3678999999999


Q ss_pred             hhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeee
Q psy9184         414 VELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCF  467 (562)
Q Consensus       414 ~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~  467 (562)
                      + .||+||||||+|||++.++                    .++|+|||.++..
T Consensus       160 ~-~GI~HrDlkp~NILv~~~~--------------------~v~LIDfg~~~~~  192 (239)
T PRK01723        160 D-AGVYHADLNAHNILLDPDG--------------------KFWLIDFDRGELR  192 (239)
T ss_pred             H-CCCCCCCCCchhEEEcCCC--------------------CEEEEECCCcccC
Confidence            9 7999999999999998875                    6999999998763

>KOG0590|consensus

Probab=99.48  E-value=4.8e-14  Score=158.59  Aligned_cols=186  Identities=20%  Similarity=0.222  Sum_probs=133.9

Q ss_pred             ceeeeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCcccccccc
Q psy9184         264 KNCKKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTELLKC  337 (562)
Q Consensus       264 ~~~~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~l~~~  337 (562)
                      .....+|.|+||.|+.+      +.++.|..... .. ...........+..|+.+-..+.|                  
T Consensus       321 ~~~~~~g~ga~g~~~~~~~~~~~~~~~~~~~r~~-~~-~~~s~~~~~~~i~sE~~i~~~l~h------------------  380 (601)
T KOG0590|consen  321 KPGRVLGSGAYGSVRIAKRRSDLKSFPEKEFRVR-VK-PTESERKYNYNITSEFCIGSSLSH------------------  380 (601)
T ss_pred             CccceeeecccCceEEEEecCCCccchhhhhhcc-cC-CcccHHHHhhhhhhheeecccccC------------------
Confidence            45688999999977777      33333322211 00 001122222337778888888888                  


Q ss_pred             cccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc---cCCHHHHHHHHHHHHHHHHHHHh
Q psy9184         338 SCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK---YRSPNQTYAMILQVVFSLAVAEV  414 (562)
Q Consensus       338 ~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~---~l~e~~i~~I~~QIl~aL~yLH~  414 (562)
                              ||++.....+.+.             ...+..||||++ +++..+.   ++...++..++.||+.||.|+|+
T Consensus       381 --------~~~~e~l~~~~~~-------------~~~~~~mE~~~~-Dlf~~~~~~~~~~~~e~~c~fKqL~~Gv~y~h~  438 (601)
T KOG0590|consen  381 --------PNIIETLDIVQEI-------------DGILQSMEYCPY-DLFSLVMSNGKLTPLEADCFFKQLLRGVKYLHS  438 (601)
T ss_pred             --------CchhhhHHHHhhc-------------ccchhhhhcccH-HHHHHHhcccccchhhhhHHHHHHHHHHHHHHh
Confidence                    8988888877652             233444999997 7766664   48899999999999999999999


Q ss_pred             hCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecC---------CcEEEeecCCCccccC
Q psy9184         415 ELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVG---------EKICYYDLSQDEELFE  485 (562)
Q Consensus       415 ~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~---------~g~v~~~l~~~pelF~  485 (562)
                       +||.||||||+|+|+...+                    .+||+|||.+....-         .|.++.+.|.+||++.
T Consensus       439 -~GiahrdlK~enll~~~~g--------------------~lki~Dfg~~~vf~~~~e~~~~~~~g~~gS~pY~apE~~~  497 (601)
T KOG0590|consen  439 -MGLAHRDLKLENLLVTENG--------------------ILKIIDFGAASVFRYPWEKNIHESSGIVGSDPYLAPEVLT  497 (601)
T ss_pred             -cCceeccCccccEEEecCC--------------------ceEEeecCcceeeccCcchhhhhhcCcccCCcCcCccccc
Confidence             8999999999999999997                    799999999876643         5778888999999998


Q ss_pred             CC-CCcH-HHHHHHhhccc-----CCCCCCCCCC
Q psy9184         486 GE-GDYQ-FDMYRMMRKQC-----QNNWQNFTPK  512 (562)
Q Consensus       486 g~-~~~q-~dIy~lm~~~~-----~~~W~~~~P~  512 (562)
                      +. ++.. .|||+......     ...|..-...
T Consensus       498 ~~~ydpr~vDiwS~~ii~~~m~~~~~~Wk~a~~~  531 (601)
T KOG0590|consen  498 GKEYDPRAVDVWSCGIIYICMILGRFPWKVAKKS  531 (601)
T ss_pred             ccccCcchhhhhhccceEEEEecCCCcccccccc
Confidence            84 4444 88888633332     4456544443

>PLN00181 protein SPA1-RELATED; Provisional

Probab=99.46  E-value=3.5e-14  Score=165.27  Aligned_cols=141  Identities=12%  Similarity=0.049  Sum_probs=94.9

Q ss_pred             CCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc----cCCHHHHHHHHHHHHHHHHHHHhhCCeEec
Q psy9184         346 DRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK----YRSPNQTYAMILQVVFSLAVAEVELEFEHR  421 (562)
Q Consensus       346 pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~----~l~e~~i~~I~~QIl~aL~yLH~~~~IiHR  421 (562)
                      +||++++++|....      +.-.....++++||++. +++.+.+.    .+++.+++.+++||+.||+|||+ +||+||
T Consensus        33 ~~~~~~~~~~~~~~------~~~~~~~~~~~~~e~~~-~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~-~gIvHr  104 (793)
T PLN00181         33 DYVRSLLGSHKEGN------LDGLDDDSIVRALECED-VSLRQWLDNPDRSVDAFECFHVFRQIVEIVNAAHS-QGIVVH  104 (793)
T ss_pred             HHHHHhhcccCCcc------ccccccchhhhhhccCC-ccHHHHHhcccccccHHHHHHHHHHHHHHHHHHHh-CCeeec
Confidence            57778888775422      11122346788889874 56655553    28899999999999999999999 799999


Q ss_pred             cCCCCCEEEccCCCCCcccccCCcccc---cccCCceEEEEeccceeeecC---------------------CcEEEeec
Q psy9184         422 DLHMSNILVLQTDQDESSFTLDDTHYA---MKTAGVQVTIIDFTISRCFVG---------------------EKICYYDL  477 (562)
Q Consensus       422 DLKpeNILl~~~~~~~~~~~~~~~~~~---~~~~g~~vKL~DFGLSr~~~~---------------------~g~v~~~l  477 (562)
                      ||||+||||+..+.-    ++.+....   .......+||+|||+++....                     ...+.+..
T Consensus       105 DlKP~NiLl~~~~~~----k~~d~~~~~~~~~~~~~~~ki~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~  180 (793)
T PLN00181        105 NVRPSCFVMSSFNHV----SFIESASCSDSGSDEDATTKSREIGSSRREEILSERRIEKLEEVKKQPFPMKQILAMEMSW  180 (793)
T ss_pred             cCCchhEEEcccCcE----EEeeccccCcccccccCcccccccccccccccccccchhhhhccccCCCcccccccCCCcc
Confidence            999999999765421    00000000   001123689999999985321                     01234667


Q ss_pred             CCCccccCC-CCCcHHHHHHHh
Q psy9184         478 SQDEELFEG-EGDYQFDMYRMM  498 (562)
Q Consensus       478 ~~~pelF~g-~~~~q~dIy~lm  498 (562)
                      |++||++.+ ......|||+..
T Consensus       181 Y~APE~~~~~~~~~~sDVwSlG  202 (793)
T PLN00181        181 YTSPEEDNGSSSNCASDVYRLG  202 (793)
T ss_pred             eEChhhhccCCCCchhhhhhHH
Confidence            999998776 456679998753

>KOG0603|consensus

Probab=99.38  E-value=5.1e-14  Score=153.53  Aligned_cols=180  Identities=18%  Similarity=0.256  Sum_probs=137.5

Q ss_pred             eeeccCceEEEEE---------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCccccccccc
Q psy9184         268 KIGEGVYGEVFKL---------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTELLKCS  338 (562)
Q Consensus       268 ~LG~GsfG~Vyka---------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~l~~~~  338 (562)
                      .+|+|+||.|+++         ..+|+|+..+.......      ...-..|-.++..++.                   
T Consensus         1 vlg~g~~gkvfLvrk~~g~da~~~yamkvl~k~t~~~~~------~~~t~~er~il~~~~~-------------------   55 (612)
T KOG0603|consen    1 VLGQGSYGKVFLVRKAGGADAGHLYAMKVLKKATLKVRD------RTHTKQERIILAFVHN-------------------   55 (612)
T ss_pred             CCCcCCCcchHHHHHhccccccchhhhhccccccccccc------ccccccHHHHHhhccC-------------------
Confidence            3799999999998         78999998876422111      1144567788888885                   


Q ss_pred             ccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCcccccc---CCHHHHHHHHHHHHHHHHHHHhh
Q psy9184         339 CVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIKY---RSPNQTYAMILQVVFSLAVAEVE  415 (562)
Q Consensus       339 iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~~---l~e~~i~~I~~QIl~aL~yLH~~  415 (562)
                            ||.++++...|+.             +..+|+++++..||.++..+..   +.+.....+...++.|++++|+ 
T Consensus        56 ------~~f~v~lhyafqt-------------~~kl~l~ld~~rgg~lft~l~~~~~f~~~~~~~~~aelaLald~lh~-  115 (612)
T KOG0603|consen   56 ------TPFLVKLHYAFQT-------------DGKLYLILDFLRGGDLFTRLSKEVMFDELDVAFYLAELALALDHLHK-  115 (612)
T ss_pred             ------CCceeeeeeeecc-------------ccchhHhhhhcccchhhhccccCCchHHHHHHHHHHHHHHHHhhcch-
Confidence                  5999999998885             6699999999999999877754   7788899999999999999999 


Q ss_pred             CCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecCC-cEEEeecCCCccccCCCCCcHHHH
Q psy9184         416 LEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVGE-KICYYDLSQDEELFEGEGDYQFDM  494 (562)
Q Consensus       416 ~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~~-g~v~~~l~~~pelF~g~~~~q~dI  494 (562)
                      .+|+|||+|++||+++..|                    ++++.|||+++..... ..+++-.|++||++.|.  .++.-
T Consensus       116 l~iiyrd~k~enilld~~G--------------------hi~~tdfglske~v~~~~~cgt~eymApEI~~gh--~~a~D  173 (612)
T KOG0603|consen  116 LGIAYRDYKLENVLLLLEG--------------------HIKLTDFGLSKEAVKEKIACGTYEYRAPEIINGH--LSAAD  173 (612)
T ss_pred             hHHHHhcccccceeecccC--------------------ccccCCchhhhHhHhhhhcccchhhhhhHhhhcc--CCccc
Confidence            8999999999999999998                    7999999999976541 12567889999999942  22222


Q ss_pred             HHHhhcccCCCCCCCCCCCh
Q psy9184         495 YRMMRKQCQNNWQNFTPKNN  514 (562)
Q Consensus       495 y~lm~~~~~~~W~~~~P~tn  514 (562)
                      |+..+....+.-.+-.|+..
T Consensus       174 ~ws~gvl~felltg~~pf~~  193 (612)
T KOG0603|consen  174 WWSFGVLAFELLTGTLPFGG  193 (612)
T ss_pred             chhhhhhHHHHhhCCCCCch
Confidence            33333333333445555543

>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase

Probab=99.26  E-value=1.6e-11  Score=133.76  Aligned_cols=75  Identities=23%  Similarity=0.204  Sum_probs=56.3

Q ss_pred             eEEEEEEecCCCCCcccccc--CCHHHHHHHHHHHHH-HHHHHHhhCCeEeccCCCCCEEEccCCCCCcccccCCccccc
Q psy9184         373 QIFIILELKNGGNDSGDIKY--RSPNQTYAMILQVVF-SLAVAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAM  449 (562)
Q Consensus       373 ~l~LVmE~~~gG~ll~~l~~--l~e~~i~~I~~QIl~-aL~yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~  449 (562)
                      ..+|||||++|+++.+....  ... ....++.+++. .+..+|. .|++|+|+||+||++..++               
T Consensus       232 ~~vLvmE~i~G~~L~~~~~~~~~~~-~~~~ia~~~~~~~l~ql~~-~g~~H~D~hPgNilv~~~g---------------  294 (437)
T TIGR01982       232 ERVLTMEWIDGIPLSDIAALDEAGL-DRKALAENLARSFLNQVLR-DGFFHADLHPGNIFVLKDG---------------  294 (437)
T ss_pred             CceEEEEeECCcccccHHHHHhcCC-CHHHHHHHHHHHHHHHHHh-CCceeCCCCcccEEECCCC---------------
Confidence            46899999998876553321  111 23445556655 4678899 7999999999999998876               


Q ss_pred             ccCCceEEEEeccceeeecC
Q psy9184         450 KTAGVQVTIIDFTISRCFVG  469 (562)
Q Consensus       450 ~~~g~~vKL~DFGLSr~~~~  469 (562)
                           .++|+|||++.....
T Consensus       295 -----~i~liDfG~~~~l~~  309 (437)
T TIGR01982       295 -----KIIALDFGIVGRLSE  309 (437)
T ss_pred             -----cEEEEeCCCeeECCH
Confidence                 799999999987754

This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.

>cd05151 ChoK Choline Kinase (ChoK)

Probab=99.25  E-value=1.7e-11  Score=114.60  Aligned_cols=125  Identities=14%  Similarity=0.101  Sum_probs=89.0

Q ss_pred             eeeeeccCceEEEEE----eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCcccccccccccC
Q psy9184         266 CKKIGEGVYGEVFKL----NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTELLKCSCVR  341 (562)
Q Consensus       266 ~~~LG~GsfG~Vyka----~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~l~~~~iv~  341 (562)
                      ++.|+.|.++.||++    ..|++|+......         ....+..|+.+++.+.+.                     
T Consensus         3 ~~~l~~G~~~~vy~~~~~~~~~~lK~~~~~~~---------~~~~~~~E~~~l~~l~~~---------------------   52 (170)
T cd05151           3 ISPLKGGMTNKNYRVEVANKKYVVRIPGNGTE---------LLINRENEAENSKLAAEA---------------------   52 (170)
T ss_pred             eeecCCcccCceEEEEECCeEEEEEeCCCCcc---------cccCHHHHHHHHHHHHHh---------------------
Confidence            467899999999998    7899998764320         112356899999988761                     


Q ss_pred             CCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccccCCHHHHHHHHHHHHHHHHHHHhhCCe---
Q psy9184         342 GRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIKYRSPNQTYAMILQVVFSLAVAEVELEF---  418 (562)
Q Consensus       342 g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~~l~e~~i~~I~~QIl~aL~yLH~~~~I---  418 (562)
                          ..+.+++...               ...-++|||+++|.++... .    .....++.+++.+|+.||. .++   
T Consensus        53 ----~~~P~~~~~~---------------~~~~~lv~e~i~G~~l~~~-~----~~~~~~~~~l~~~l~~LH~-~~~~~~  107 (170)
T cd05151          53 ----GIGPKLYYFD---------------PETGVLITEFIEGSELLTE-D----FSDPENLEKIAKLLKKLHS-SPLPDL  107 (170)
T ss_pred             ----CCCCceEEEe---------------CCCCeEEEEecCCCccccc-c----ccCHHHHHHHHHHHHHHhC-CCCCCc
Confidence                1112222221               1134799999998766533 1    1223467899999999999 674   


Q ss_pred             --EeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceee
Q psy9184         419 --EHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRC  466 (562)
Q Consensus       419 --iHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~  466 (562)
                        +|+|+||.|||++ ++                    .++++|||.+..
T Consensus       108 ~~~HgD~~~~Nil~~-~~--------------------~~~liDf~~a~~  136 (170)
T cd05151         108 VPCHNDLLPGNFLLD-DG--------------------RLWLIDWEYAGM  136 (170)
T ss_pred             eeecCCCCcCcEEEE-CC--------------------eEEEEecccccC
Confidence              9999999999998 33                    689999999864

The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph

>PF12330 DUF3635: Domain of unknown function (DUF3635); InterPro: IPR024604 This domain may be a potential Haspin-related leucine-zipper

Probab=99.19  E-value=1.7e-11  Score=106.03  Aligned_cols=78  Identities=44%  Similarity=0.828  Sum_probs=56.4

Q ss_pred             ccccCCCCCcHHHHHHHhhcccCCCCCCCCCCChhhhHHHHHHHHhhcccCCCCC-CCchhHH-HHHH--------HHHH
Q psy9184         481 EELFEGEGDYQFDMYRMMRKQCQNNWQNFTPKNNVFWIHYLVDKATCLKKGYQYL-RAPRHQA-FELL--------EELG  550 (562)
Q Consensus       481 pelF~g~~~~q~dIy~lm~~~~~~~W~~~~P~tn~~wl~yl~~~Ll~~~~~~~~~-~~~~~~~-~~~l--------~~l~  550 (562)
                      +++|.|.+++|+|||++|+....+.|+.|.|.||++||+|++++|+. .+.++.. ....++. +..+        +++.
T Consensus         1 ~~~F~g~gD~QfdiYr~Mr~~~~~~W~~f~P~TNvlWL~YL~~kLl~-~~~~~~~~~~~~~r~~~~~l~~~ldp~~k~~~   79 (98)
T PF12330_consen    1 EELFEGRGDYQFDIYRLMRSLTKNDWSEFEPKTNVLWLHYLADKLLD-KKKYKKKPSTKLQRKKLKKLWSYLDPAKKKFK   79 (98)
T ss_dssp             SGGGS--SSHHHHHHHHHHHHHTT-TTS--THHHHHHHHHHHHHHHH-S--BSSTS-SHHHHHHHHHH--------HHHH
T ss_pred             CccccCCCccHHHHHHHHHHHhhCcchhcCCHHHHHHHHHHHHHHHH-HccCCCCCCcHHHHHHHHHHhhhhhHhHHHHH
Confidence            47899999999999999999999999999999999999999999998 5555554 5555554 5556        5566


Q ss_pred             HhcCCCcCc
Q psy9184         551 QNALHFDSC  559 (562)
Q Consensus       551 ~~~l~~~s~  559 (562)
                      +...+++|+
T Consensus        80 ~~~k~~~~~   88 (98)
T PF12330_consen   80 SLFKRLESA   88 (98)
T ss_dssp             HHGGGSSSH
T ss_pred             HHHHHHhhH
Confidence            666666554

A leucine zipper was proposed to be present towards the C terminus of human Haspin, (up-stream of the current family) []; however, as this domain would appear to span several helices and be largely within a loop structure [], the actual zipper might be further downstream, and be represented by this entry, which is the very C-terminal part of the Schizosaccharomyces pombe sequence.; PDB: 2WB8_A 3F2N_A 3FMD_A 3DLZ_A 2VUW_A 3IQ7_A 3E7V_A.

>cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain

Probab=99.17  E-value=2.7e-10  Score=111.13  Aligned_cols=138  Identities=17%  Similarity=0.112  Sum_probs=94.8

Q ss_pred             eeeeccCceEEEEE--e----------eEEEEEeecCCCCCCc------ch----------h-H-HHHHHHHHHHHHHHh
Q psy9184         267 KKIGEGVYGEVFKL--N----------NSVIKIMPIEGDQSVN------GE----------E-Q-KKFREIFSEIMVTKE  316 (562)
Q Consensus       267 ~~LG~GsfG~Vyka--~----------~vAIKii~~~~~~~~~------~~----------~-~-~~~~~il~Ei~ilk~  316 (562)
                      ..||.|-=+.||.|  .          .+|||+.+.......+      +.          + . .......+|+..|++
T Consensus         3 g~i~~GKEa~V~~~~~~~~~~~~~~~~~~avKi~r~~~~~Fk~~~~y~~~~~rf~~~~~k~~~~~~~~~wa~kE~r~L~r   82 (197)
T cd05146           3 GCISTGKESVVLHANGGSNETEQVIPTECAIKVFKTTLNEFKNRDKYIKDDYRFKDRFSKLNPRKIIRMWAEKEMHNLKR   82 (197)
T ss_pred             CccccCcceEEEEEecCcccccccCCceEEEEEEeccceeEcChhhhccCCcccccCcCCCCHHHHHHHHHHHHHHHHHH
Confidence            57899999999999  2          7999998864321110      00          0 1 111223489999998


Q ss_pred             cCCccccCCCCCCcccccccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCcc-ccc--cC
Q psy9184         317 TSDLQYRTENSTPCFTELLKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSG-DIK--YR  393 (562)
Q Consensus       317 L~h~~~~~~n~~p~fv~l~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~-~l~--~l  393 (562)
                      +...                     |-..|.++..                    ..-+|||||+.++.+.. .+.  .+
T Consensus        83 l~~~---------------------Gv~vP~pi~~--------------------~~~~lvME~Ig~~~~~~~~Lkd~~~  121 (197)
T cd05146          83 MQKA---------------------GIPCPEVVVL--------------------KKHVLVMSFIGDDQVPAPKLKDAKL  121 (197)
T ss_pred             HHHc---------------------CCCCCeEEEe--------------------cCCEEEEEEcCCCCccchhhhcccc
Confidence            8761                     1112444422                    24689999997542211 122  25


Q ss_pred             CHHHHHHHHHHHHHHHHHH-HhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeee
Q psy9184         394 SPNQTYAMILQVVFSLAVA-EVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCF  467 (562)
Q Consensus       394 ~e~~i~~I~~QIl~aL~yL-H~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~  467 (562)
                      ++.++..++.|++.+|..+ |+ .||+|+||+|.|||+...                     .+.|+|||.|...
T Consensus       122 ~~~~~~~i~~~i~~~l~~l~H~-~glVHGDLs~~NIL~~~~---------------------~v~iIDF~qav~~  174 (197)
T cd05146         122 NDEEMKNAYYQVLSMMKQLYKE-CNLVHADLSEYNMLWHDG---------------------KVWFIDVSQSVEP  174 (197)
T ss_pred             CHHHHHHHHHHHHHHHHHHHHh-CCeecCCCCHHHEEEECC---------------------cEEEEECCCceeC
Confidence            5667788899999999999 78 799999999999999754                     6999999988654

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown.

>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed

Probab=99.16  E-value=5.4e-11  Score=131.98  Aligned_cols=74  Identities=20%  Similarity=0.232  Sum_probs=52.8

Q ss_pred             CeEEEEEEecCCCCCccc--cc-------cCCHHHHHHHHHHHHHHHHHHHhhCCeEeccCCCCCEEEccCCCCCccccc
Q psy9184         372 DQIFIILELKNGGNDSGD--IK-------YRSPNQTYAMILQVVFSLAVAEVELEFEHRDLHMSNILVLQTDQDESSFTL  442 (562)
Q Consensus       372 ~~l~LVmE~~~gG~ll~~--l~-------~l~e~~i~~I~~QIl~aL~yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~  442 (562)
                      ...+|||||++|+.+.+.  +.       .+.+..+..++.|++       . .||+|+|+||+||+++.++...     
T Consensus       234 t~~VLvmE~i~G~~l~d~~~l~~~g~d~~~la~~~v~~~~~Qif-------~-~GffHaDpHPGNIlv~~~g~~~-----  300 (537)
T PRK04750        234 SETVMVMERMYGIPVSDVAALRAAGTDMKLLAERGVEVFFTQVF-------R-DGFFHADMHPGNIFVSYDPPEN-----  300 (537)
T ss_pred             CCceEEEeeecCccHHhHHHHHhcCCCHHHHHHHHHHHHHHHHH-------h-CCeeeCCCChHHeEEecCCCCC-----
Confidence            357899999999876431  21       133444555555554       4 6999999999999999875211     


Q ss_pred             CCcccccccCCceEEEEeccceeeecC
Q psy9184         443 DDTHYAMKTAGVQVTIIDFTISRCFVG  469 (562)
Q Consensus       443 ~~~~~~~~~~g~~vKL~DFGLSr~~~~  469 (562)
                                 ..++++|||++.....
T Consensus       301 -----------~~i~llDFGivg~l~~  316 (537)
T PRK04750        301 -----------PRYIALDFGIVGSLNK  316 (537)
T ss_pred             -----------CeEEEEecceEEECCH
Confidence                       1699999999987754

>smart00750 KIND kinase non-catalytic C-lobe domain

Probab=99.15  E-value=1.1e-10  Score=109.74  Aligned_cols=140  Identities=11%  Similarity=-0.033  Sum_probs=93.1

Q ss_pred             cCCHHHHHHHHHHHHHHHHHHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecCCc
Q psy9184         392 YRSPNQTYAMILQVVFSLAVAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVGEK  471 (562)
Q Consensus       392 ~l~e~~i~~I~~QIl~aL~yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~~g  471 (562)
                      .+++.+++.|+.||+.||.|||+ .+      ||+|||++.++                    .+++  ||+++......
T Consensus        13 ~l~~~~~~~i~~qi~~~L~~lH~-~~------kp~Nil~~~~~--------------------~~~~--fG~~~~~~~~~   63 (176)
T smart00750       13 PLNEEEIWAVCLQCLRALRELHR-QA------KSGNILLTWDG--------------------LLKL--DGSVAFKTPEQ   63 (176)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHh-cC------CcccEeEcCcc--------------------ceee--ccceEeecccc
Confidence            38999999999999999999999 56      99999998876                    6888  99999876655


Q ss_pred             EEEeecCCCccccCC-CCCcHHHHHHHhhcccCCCCCCCCCCChhhhHHHHHHHHhhc-ccCCCCCCCchhHHHH--HHH
Q psy9184         472 ICYYDLSQDEELFEG-EGDYQFDMYRMMRKQCQNNWQNFTPKNNVFWIHYLVDKATCL-KKGYQYLRAPRHQAFE--LLE  547 (562)
Q Consensus       472 ~v~~~l~~~pelF~g-~~~~q~dIy~lm~~~~~~~W~~~~P~tn~~wl~yl~~~Ll~~-~~~~~~~~~~~~~~~~--~l~  547 (562)
                      ..++..|++||++.+ ..+...|||++.-. ......+..|+.+...+......+... ....+..+........  .+.
T Consensus        64 ~~g~~~y~aPE~~~~~~~~~~~DiwSlG~i-l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  142 (176)
T smart00750       64 SRVDPYFMAPEVIQGQSYTEKADIYSLGIT-LYEALDYELPYNEERELSAILEILLNGMPADDPRDRSNLESVSAARSFA  142 (176)
T ss_pred             CCCcccccChHHhcCCCCcchhhHHHHHHH-HHHHHhCCCCccccchhcHHHHHHHHHhccCCccccccHHHHHhhhhHH
Confidence            566788999999877 45667999986433 333344445554332222222222220 1111111112222233  588


Q ss_pred             HHHHhcCCCcCcCC
Q psy9184         548 ELGQNALHFDSCYE  561 (562)
Q Consensus       548 ~l~~~~l~~~s~~~  561 (562)
                      +|.+.+|..+...|
T Consensus       143 ~~i~~cl~~~p~~R  156 (176)
T smart00750      143 DFMRVCASRLPQRR  156 (176)
T ss_pred             HHHHHHHhcccccc
Confidence            88888888776655

It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features

>KOG4158|consensus

Probab=99.14  E-value=2.1e-10  Score=119.53  Aligned_cols=126  Identities=17%  Similarity=0.153  Sum_probs=86.9

Q ss_pred             CCCCCceeehhhhhccccCCCC-------------CCCCCC-CCeEEEEEEecCCCCCccccc--cCCHHHHHHHHHHHH
Q psy9184         343 RYPDRLVTLWEEFAKTKKSYND-------------HPSMFE-EDQIFIILELKNGGNDSGDIK--YRSPNQTYAMILQVV  406 (562)
Q Consensus       343 ~~~pnIv~l~~~f~~~~~s~~~-------------~p~~~~-~~~l~LVmE~~~gG~ll~~l~--~l~e~~i~~I~~QIl  406 (562)
                      ..|||||+++.+|.++-..-.+             +|..+. ...+|+||.-.+. ++.+.+-  ..+......++.|++
T Consensus       273 a~HPNIvri~~aF~dsv~~lPda~~~YPdalp~R~~p~g~g~~~tlylvMkrY~~-tLr~yl~~~~~s~r~~~~~laQlL  351 (598)
T KOG4158|consen  273 AKHPNIVRIQTAFIDSVKVLPDAIERYPDALPARWYPSGAGEPKTLYLVMKRYRQ-TLREYLWTRHRSYRTGRVILAQLL  351 (598)
T ss_pred             CCCCCEEeehhhhhhhhccCCchhhhCcccccceecccccCCCceEEEehhcchh-hHHHHHhcCCCchHHHHHHHHHHH
Confidence            3479999998888764211100             233222 3478999987752 3444332  377888899999999


Q ss_pred             HHHHHHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecCCcE-----------EEe
Q psy9184         407 FSLAVAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVGEKI-----------CYY  475 (562)
Q Consensus       407 ~aL~yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~~g~-----------v~~  475 (562)
                      +|+.|||. +||.|||+|.+|||+.-+++..+                .+.|+|||.+-.-...|.           -+.
T Consensus       352 Eav~hL~~-hgvAhRDlKSDNiL~ElddD~~P----------------~LVvaDFGCcLAd~~hGlqlpy~S~~Vd~GGN  414 (598)
T KOG4158|consen  352 EAVTHLHK-HGVAHRDLKSDNILLELDDDEIP----------------QLVVADFGCCLADDNHGLQLPYESDEVDLGGN  414 (598)
T ss_pred             HHHHHHHH-ccchhhcccccceEEEecCCCCc----------------EEEEcccceeeeccccccccccccccccCCCc
Confidence            99999999 89999999999999987754322                789999997755433110           112


Q ss_pred             ecCCCccccCC
Q psy9184         476 DLSQDEELFEG  486 (562)
Q Consensus       476 ~l~~~pelF~g  486 (562)
                      --.++||+|..
T Consensus       415 a~lmAPEi~ta  425 (598)
T KOG4158|consen  415 AKLMAPEIATA  425 (598)
T ss_pred             ceecchhhhhc
Confidence            23468888876

>KOG1024|consensus

Probab=99.12  E-value=4.4e-11  Score=124.26  Aligned_cols=171  Identities=15%  Similarity=0.152  Sum_probs=122.6

Q ss_pred             CCCceeeeeeccCceEEEEE-----------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCC
Q psy9184         261 SALKNCKKIGEGVYGEVFKL-----------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTP  329 (562)
Q Consensus       261 ~~y~~~~~LG~GsfG~Vyka-----------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p  329 (562)
                      +++++...+-+|.||+||.|           +.|-+|.++...       .+-....++.|...+..++|          
T Consensus       284 ~Rv~l~~llqEGtFGri~~gI~~eEdt~n~~q~v~vKTvk~~A-------S~iQv~~~L~es~lly~~sH----------  346 (563)
T KOG1024|consen  284 CRVRLSCLLQEGTFGRIYRGIWREEDTYNDCQEVLVKTVKQHA-------SQIQVNLLLQESMLLYGASH----------  346 (563)
T ss_pred             hheechhhhhcCchhheeeeeecccCCcchHHHHHHHHHHhcc-------cHHHHHHHHHHHHHHhcCcC----------
Confidence            56788889999999999999           556667666433       35566788899999999888          


Q ss_pred             cccccccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc-----------cCCHHHH
Q psy9184         330 CFTELLKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK-----------YRSPNQT  398 (562)
Q Consensus       330 ~fv~l~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~-----------~l~e~~i  398 (562)
                                      ||+..+.++...            .....+.++.+..-|.+-..+.           .++..+.
T Consensus       347 ----------------~nll~V~~V~ie------------~~~~P~V~y~~~~~gNLK~FL~~Cr~~~~~~aqtvtt~ql  398 (563)
T KOG1024|consen  347 ----------------PNLLSVLGVSIE------------DYATPFVLYPATGVGNLKSFLQICRGDDPSYAQTVTTIQL  398 (563)
T ss_pred             ----------------CCccceeEEEee------------ccCcceEEEeccCcchHHHHHHHhccCCCccccchhHHHH
Confidence                            555555444322            1335566777776554433332           2667788


Q ss_pred             HHHHHHHHHHHHHHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecC--CcEEEe-
Q psy9184         399 YAMILQVVFSLAVAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVG--EKICYY-  475 (562)
Q Consensus       399 ~~I~~QIl~aL~yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~--~g~v~~-  475 (562)
                      ..++.|++.|++|||+ ++|||.||-..|.+|++.-                    +|||+|=.|||-+-+  .-|++- 
T Consensus       399 V~masQla~am~hlh~-~~ViHkDiAaRNCvIdd~L--------------------qVkltDsaLSRDLFP~DYhcLGDn  457 (563)
T KOG1024|consen  399 VLMASQLAMAMEHLHN-HGVIHKDIAARNCVIDDQL--------------------QVKLTDSALSRDLFPGDYHCLGDN  457 (563)
T ss_pred             HHHHHHHHHHHHHHHh-cCcccchhhhhcceehhhe--------------------eEEeccchhccccCcccccccCCC
Confidence            9999999999999999 8999999999999999984                    899999999998765  334441 


Q ss_pred             ----ecCCCccccCC-CCCcHHHHHHH
Q psy9184         476 ----DLSQDEELFEG-EGDYQFDMYRM  497 (562)
Q Consensus       476 ----~l~~~pelF~g-~~~~q~dIy~l  497 (562)
                          --|+++|-... .....+|+|+.
T Consensus       458 EnRPvkWMslEal~n~~yssasDvWsf  484 (563)
T KOG1024|consen  458 ENRPVKWMSLEALQNSHYSSASDVWSF  484 (563)
T ss_pred             CCCcccccCHHHHhhhhhcchhhhHHH
Confidence                13556665444 23344677654

>KOG3087|consensus

Probab=99.01  E-value=2.5e-09  Score=102.10  Aligned_cols=168  Identities=17%  Similarity=0.109  Sum_probs=110.7

Q ss_pred             eeeeeeccCceEEEEE----eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCccccccccccc
Q psy9184         265 NCKKIGEGVYGEVFKL----NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTELLKCSCV  340 (562)
Q Consensus       265 ~~~~LG~GsfG~Vyka----~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~l~~~~iv  340 (562)
                      ....|-+|+-+.|+++    +.+.||.-....-....-+.+-...+..+|+++|.++..               .++++ 
T Consensus        11 ~l~likQGAEArv~~~~~~Ge~~iIK~Rf~K~YRHP~LD~kLtr~Rt~~Ear~l~k~~~---------------~GI~~-   74 (229)
T KOG3087|consen   11 SLELIKQGAEARVPRGSFSGEAAIIKERFSKRYRHPALDQKLTRKRTKQEARLLAKCRA---------------LGIPA-   74 (229)
T ss_pred             cceeeeccceeeEeeeccCCceeEEeecccccccchHHHHHHHHHHHHHHHHHHHHHHH---------------hCCCC-
Confidence            4678899999999999    777888655433222222334456778899999999876               12222 


Q ss_pred             CCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc-----cCCHHHH-HHHHHHHHHHHHHHHh
Q psy9184         341 RGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK-----YRSPNQT-YAMILQVVFSLAVAEV  414 (562)
Q Consensus       341 ~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~-----~l~e~~i-~~I~~QIl~aL~yLH~  414 (562)
                           |-++-.     +             ...-.|+|||.+|-.....+.     .-.+++. ..++++|-..+.-||.
T Consensus        75 -----P~l~~~-----D-------------~~~~~i~ME~~~g~~~vk~~i~~~~~~~~~d~~~~~~~~~iG~~igklH~  131 (229)
T KOG3087|consen   75 -----PRLIFI-----D-------------TYGGQIYMEFIDGASTVKDFILSTMEDESEDEGLAELARRIGELIGKLHD  131 (229)
T ss_pred             -----ceEEEE-----e-------------cCCCeEEEEeccchhHHHHHHHHHccCcccchhHHHHHHHHHHHHHHhhh
Confidence                 544421     1             224478999998755544332     1223333 7889999999999999


Q ss_pred             hCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecCCcEEEeecCCCccccCCCCC
Q psy9184         415 ELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVGEKICYYDLSQDEELFEGEGD  489 (562)
Q Consensus       415 ~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~~g~v~~~l~~~pelF~g~~~  489 (562)
                       .+|||+||..+|||+.+++.+                 +.+.++||||+........-+.++|.-+..+-++.+
T Consensus       132 -ndiiHGDLTTSNill~~~~~~-----------------~~~~lIdfgls~~s~~~EDKgVDLYVlErA~lsTh~  188 (229)
T KOG3087|consen  132 -NDIIHGDLTTSNILLRSDGNQ-----------------ITPILIDFGLSSVSRLPEDKGVDLYVLERAVLSTHD  188 (229)
T ss_pred             -CCeecccccccceEEecCCCc-----------------CceEEEeecchhcccCcccccceeeeehHhHhccCc
Confidence             699999999999999998753                 257999999987654322222334433333333333

>COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms]

Probab=98.97  E-value=2.3e-09  Score=102.68  Aligned_cols=137  Identities=15%  Similarity=0.112  Sum_probs=93.1

Q ss_pred             eeeeccCceEEEEE----eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCcccccccccccCC
Q psy9184         267 KKIGEGVYGEVFKL----NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTELLKCSCVRG  342 (562)
Q Consensus       267 ~~LG~GsfG~Vyka----~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~l~~~~iv~g  342 (562)
                      ..+++|+=+.+|.+    ..+++|.-..+.-....-...-......+|+.++.++...               |+++   
T Consensus         2 ~~i~~GAEa~i~~~~~~g~~av~K~Ri~K~YR~p~LD~klrr~Rt~~Earil~~a~~~---------------GV~~---   63 (204)
T COG3642           2 DLIKQGAEAIIYLTDFLGLPAVVKERIPKRYRHPELDEKLRRERTRREARILAKAREA---------------GVPV---   63 (204)
T ss_pred             chhhCCcceeEEeeeccCcceEEEeecCcccCChHHHHHHHHHHHHHHHHHHHHHHHc---------------CCCC---
Confidence            45788999999998    4667776433321111112222346678899999988762               1111   


Q ss_pred             CCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccccCCHHHHHHHHHHHHHHHHHHHhhCCeEecc
Q psy9184         343 RYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIKYRSPNQTYAMILQVVFSLAVAEVELEFEHRD  422 (562)
Q Consensus       343 ~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~~l~e~~i~~I~~QIl~aL~yLH~~~~IiHRD  422 (562)
                         |-+.   ++.               .+.-.|+|||.+|-.+-+.+..-    ...+++.|-.-+.-||. .||+|+|
T Consensus        64 ---P~v~---dvD---------------~~~~~I~me~I~G~~lkd~l~~~----~~~~~r~vG~~vg~lH~-~givHGD  117 (204)
T COG3642          64 ---PIVY---DVD---------------PDNGLIVMEYIEGELLKDALEEA----RPDLLREVGRLVGKLHK-AGIVHGD  117 (204)
T ss_pred             ---CeEE---EEc---------------CCCCEEEEEEeCChhHHHHHHhc----chHHHHHHHHHHHHHHh-cCeecCC
Confidence               4333   222               33567999999865433333222    35677888888999999 7999999


Q ss_pred             CCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeec
Q psy9184         423 LHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFV  468 (562)
Q Consensus       423 LKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~  468 (562)
                      |.++||++...                     .+.++||||+....
T Consensus       118 LTtsNiIl~~~---------------------~i~~IDfGLg~~s~  142 (204)
T COG3642         118 LTTSNIILSGG---------------------RIYFIDFGLGEFSD  142 (204)
T ss_pred             CccceEEEeCC---------------------cEEEEECCcccccc
Confidence            99999999988                     59999999997543

>KOG1240|consensus

Probab=98.92  E-value=4.7e-10  Score=128.69  Aligned_cols=186  Identities=11%  Similarity=0.098  Sum_probs=127.9

Q ss_pred             CCceeeeeeccCceEEEEE----eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCcccccccc
Q psy9184         262 ALKNCKKIGEGVYGEVFKL----NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTELLKC  337 (562)
Q Consensus       262 ~y~~~~~LG~GsfG~Vyka----~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~l~~~  337 (562)
                      .+...+.||.+-|=.|.+|    -.|+||++-+...    ...-..+.+-+.|++ ...+++                  
T Consensus        24 e~~~~~~LGstRFlKv~r~k~~eG~vVvKVFvk~~p----~~sL~~~~qrL~~ik-~~l~~~------------------   80 (1431)
T KOG1240|consen   24 ECHYVENLGSTRFLKVARAKDREGLVVVKVFVKQDP----TISLRPFKQRLEEIK-FALMKA------------------   80 (1431)
T ss_pred             ceeeecccCchhhhhhhhccCCCceEEEEEEeccCC----CCCchHHHHHHHHHH-HHhhcC------------------
Confidence            5677899999999999999    6799999877642    112233444556666 455555                  


Q ss_pred             cccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc---cCCHHHHHHHHHHHHHHHHHHHh
Q psy9184         338 SCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK---YRSPNQTYAMILQVVFSLAVAEV  414 (562)
Q Consensus       338 ~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~---~l~e~~i~~I~~QIl~aL~yLH~  414 (562)
                              ||.+.+-.....             +.-.|||=+|..+ .|.+++.   ++..-+-+-|+.||+.||.-+|.
T Consensus        81 --------pn~lPfqk~~~t-------------~kAAylvRqyvkh-nLyDRlSTRPFL~~iEKkWiaFQLL~al~qcH~  138 (1431)
T KOG1240|consen   81 --------PNCLPFQKVLVT-------------DKAAYLVRQYVKH-NLYDRLSTRPFLVLIEKKWIAFQLLKALSQCHK  138 (1431)
T ss_pred             --------CcccchHHHHHh-------------hHHHHHHHHHHhh-hhhhhhccchHHHHHHHHHHHHHHHHHHHHHHH
Confidence                    888776655443             3356788888864 5777775   36777888999999999999999


Q ss_pred             hCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecC------CcEEE------eecCCCcc
Q psy9184         415 ELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVG------EKICY------YDLSQDEE  482 (562)
Q Consensus       415 ~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~------~g~v~------~~l~~~pe  482 (562)
                       .||+|+|||.|||||+..+                    -+.|+||..-+...-      .-..+      -..|.|||
T Consensus       139 -~gVcHGDIKsENILiTSWN--------------------W~~LtDFAsFKPtYLPeDNPadf~fFFDTSrRRtCYiAPE  197 (1431)
T KOG1240|consen  139 -LGVCHGDIKSENILITSWN--------------------WLYLTDFASFKPTYLPEDNPADFTFFFDTSRRRTCYIAPE  197 (1431)
T ss_pred             -cCccccccccceEEEeeec--------------------hhhhhcccccCCccCCCCCcccceEEEecCCceeeecChH
Confidence             7999999999999999986                    688899987665442      01111      12366888


Q ss_pred             ccCCCC------------CcHHHHHHHhhcccCCCCCCCCCCC
Q psy9184         483 LFEGEG------------DYQFDMYRMMRKQCQNNWQNFTPKN  513 (562)
Q Consensus       483 lF~g~~------------~~q~dIy~lm~~~~~~~W~~~~P~t  513 (562)
                      -|-...            ....|||++.-...+---.+..+|+
T Consensus       198 RFv~~~~~~~~~q~~~~L~paMDIFS~GCViaELf~Eg~PlF~  240 (1431)
T KOG1240|consen  198 RFVSALGKTSVGQDAPLLTPAMDIFSAGCVIAELFLEGRPLFT  240 (1431)
T ss_pred             hhhccccccccCCcccccChhhhhhhhhHHHHHHHhcCCCccc
Confidence            876522            1227787765544422223344443

>cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins

Probab=98.91  E-value=1.3e-08  Score=98.69  Aligned_cols=142  Identities=15%  Similarity=0.209  Sum_probs=98.6

Q ss_pred             eeeeeccCceEEEEE-----eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCccccccccccc
Q psy9184         266 CKKIGEGVYGEVFKL-----NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTELLKCSCV  340 (562)
Q Consensus       266 ~~~LG~GsfG~Vyka-----~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~l~~~~iv  340 (562)
                      .+.||.|.++.||++     ..+++|+......       ......+.+|+.+++.+.+.                    
T Consensus         3 ~~~l~~G~~n~~~~v~~~~g~~~ilK~~~~~~~-------~~~~~~~~~E~~~~~~l~~~--------------------   55 (223)
T cd05154           3 VRQLSGGQSNLTYLLTAGGGRRLVLRRPPPGAL-------LPSAHDVAREYRVLRALAGT--------------------   55 (223)
T ss_pred             ceecCCCccceEEEEEecCCcceEEEeCCCccc-------CcccccHHHHHHHHHHhhCC--------------------
Confidence            367899999999998     4789998765421       01234678899999999871                    


Q ss_pred             CCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc--cCCHHHHHHHHHHHHHHHHHHHh----
Q psy9184         341 RGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK--YRSPNQTYAMILQVVFSLAVAEV----  414 (562)
Q Consensus       341 ~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~--~l~e~~i~~I~~QIl~aL~yLH~----  414 (562)
                       +...|.++..   .....          ..+..|++||+++|+++...+.  .+++.+...++.+++.+|..||+    
T Consensus        56 -~~~vp~~~~~---~~~~~----------~~~~~~~v~e~i~G~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~  121 (223)
T cd05154          56 -GVPVPKVLAL---CEDPS----------VLGTPFYVMERVDGRVLRDRLLRPELSPEERRALARALADTLAALHSVDPA  121 (223)
T ss_pred             -CCCCCCEEEE---CCCCC----------ccCCceEEEEEeCCEecCCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCChh
Confidence             0001333322   22100          1235689999999887666552  47778888888899999988884    


Q ss_pred             ---------------------------------------------------hCCeEeccCCCCCEEEccCCCCCcccccC
Q psy9184         415 ---------------------------------------------------ELEFEHRDLHMSNILVLQTDQDESSFTLD  443 (562)
Q Consensus       415 ---------------------------------------------------~~~IiHRDLKpeNILl~~~~~~~~~~~~~  443 (562)
                                                                         ...++|+|++|.|||++.++.        
T Consensus       122 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~--------  193 (223)
T cd05154         122 AVGLGDLGRPGGYLERQVARWRRQYDASRTDEPPAMERLLRWLEAHLPADSRPGLVHGDYRLGNVLFHPDEP--------  193 (223)
T ss_pred             hcCCcccCCCCchHHHHHHHHHHHHHhhcccccHHHHHHHHHHHhhCCCCCCcEEEECCCCcccEEEcCCCC--------
Confidence                                                               123699999999999988411        


Q ss_pred             CcccccccCCceEEEEeccceee
Q psy9184         444 DTHYAMKTAGVQVTIIDFTISRC  466 (562)
Q Consensus       444 ~~~~~~~~~g~~vKL~DFGLSr~  466 (562)
                                -.+.|+||+.+..
T Consensus       194 ----------~~~~iID~e~~~~  206 (223)
T cd05154         194 ----------RVVAVLDWELATL  206 (223)
T ss_pred             ----------cEEEEEecccccc
Confidence                      0589999998764

This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain

>PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A

Probab=98.90  E-value=2.4e-09  Score=109.99  Aligned_cols=246  Identities=14%  Similarity=0.104  Sum_probs=120.0

Q ss_pred             CceeeeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccC-CCCCCcccccc
Q psy9184         263 LKNCKKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRT-ENSTPCFTELL  335 (562)
Q Consensus       263 y~~~~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~-~n~~p~fv~l~  335 (562)
                      +.....||.|++|.||.+      +.+|+|+.....     .......+++.+|......+.+.+... ....-.|+-=.
T Consensus        14 l~~~~~i~~g~~~~v~~v~d~~t~~~~avkvf~~~~-----~~~~~~~~~~~~e~l~~~~~~~~~~p~~a~~~~r~l~P~   88 (288)
T PF14531_consen   14 LVRGRIIGKGGFSIVFEVTDVETGEEFAVKVFLLPA-----DASANEYEQLKEEQLAITLFPGVKNPKEAYRHLRFLVPL   88 (288)
T ss_dssp             EEEEEEEEEETTEEEEEEEETTTTEEEEEEEEEESS-----TTHTTHHHHHHHHHHGGGGSTT--SHHHHHHHH-B---S
T ss_pred             EEEccccccCCceEEEEEEEccCCceEEEEEEeccc-----ccchHHHHHHHHHHHHhhhhccCCCHHHHHHhceEEeee
Confidence            466789999999999999      899999988765     233445667777765544433311100 00000000001


Q ss_pred             cccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCcccccc-------C----CHHHHHHHHHH
Q psy9184         336 KCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIKY-------R----SPNQTYAMILQ  404 (562)
Q Consensus       336 ~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~~-------l----~e~~i~~I~~Q  404 (562)
                      +...+.++. +.+. .-.     +      -..+.--..+++|+-+. + ++..+..       .    ...-...+..|
T Consensus        89 d~~~i~~~~-~~~~-~~~-----~------~~~~~v~n~~~l~P~~~-~-dL~~~~~~l~~~~~~~~~l~~~arl~lT~Q  153 (288)
T PF14531_consen   89 DLLRIPGKP-PFFE-RGP-----G------QSIYWVLNRFLLMPRAQ-G-DLQDLVEALFSRAQTHSPLAFAARLSLTVQ  153 (288)
T ss_dssp             EEEEETTS--SEEE-ECE-----T------TEEEEEESEEEEEE--S-E-EHHHHHHHHHHHTTTSHHHHHHHHHHHHHH
T ss_pred             EEEEEcCCC-ccee-cCC-----C------Cccceeehhhhccchhh-h-cHHHHHHHHhhcccccchhHHHHHHHHHHH
Confidence            111111100 0000 000     0      00000002366676664 3 3333321       1    11223456699


Q ss_pred             HHHHHHHHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecCCcE--EEeecCCCcc
Q psy9184         405 VVFSLAVAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVGEKI--CYYDLSQDEE  482 (562)
Q Consensus       405 Il~aL~yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~~g~--v~~~l~~~pe  482 (562)
                      ++..+++||. .|++|+||+|+|++++.+|                    .+.|+||+..........  .....+.+||
T Consensus       154 ~I~lvA~Lh~-~GlVHgdi~~~nfll~~~G--------------------~v~Lg~F~~~~r~g~~~~~~~~~~~~~PPe  212 (288)
T PF14531_consen  154 MIRLVANLHS-YGLVHGDIKPENFLLDQDG--------------------GVFLGDFSSLVRAGTRYRCSEFPVAFTPPE  212 (288)
T ss_dssp             HHHHHHHHHH-TTEEEST-SGGGEEE-TTS---------------------EEE--GGGEEETTEEEEGGGS-TTTS-HH
T ss_pred             HHHHHHHHhh-cceEecccceeeEEEcCCC--------------------CEEEcChHHHeecCceeeccCCCcccCChh
Confidence            9999999999 7999999999999999998                    799999998776543211  1223345555


Q ss_pred             ccCCC---------CCcHHHHHHHhhcccCCCCCCCCCCChhhhHHHHHHHHhhcccCCCCCCCchhHHHHHHHHHHHhc
Q psy9184         483 LFEGE---------GDYQFDMYRMMRKQCQNNWQNFTPKNNVFWIHYLVDKATCLKKGYQYLRAPRHQAFELLEELGQNA  553 (562)
Q Consensus       483 lF~g~---------~~~q~dIy~lm~~~~~~~W~~~~P~tn~~wl~yl~~~Ll~~~~~~~~~~~~~~~~~~~l~~l~~~~  553 (562)
                      +....         .++..|.|.+ |..+...|..-.|+.-.. -.....      ..|..=+    ..-+.++.|++.+
T Consensus       213 ~~~~~~~~~~~~~~~t~~~DaW~L-G~~ly~lWC~~lPf~~~~-~~~~~~------~~f~~C~----~~Pe~v~~LI~~l  280 (288)
T PF14531_consen  213 LESCAGQFGQNNAPYTFATDAWQL-GITLYSLWCGRLPFGLSS-PEADPE------WDFSRCR----DMPEPVQFLIRGL  280 (288)
T ss_dssp             HHHHHTSCHHSEEEE-HHHHHHHH-HHHHHHHHHSS-STCCCG-GGSTSG------GGGTTSS-------HHHHHHHHHH
T ss_pred             hhhhhcccCcccceeeeccCHHHH-HHHHHHHHHccCCCCCCC-cccccc------ccchhcC----CcCHHHHHHHHHH
Confidence            54332         2333566543 333344555555552110 000000      0122211    2345788889999


Q ss_pred             CCCcCcCC
Q psy9184         554 LHFDSCYE  561 (562)
Q Consensus       554 l~~~s~~~  561 (562)
                      |.++...|
T Consensus       281 L~~~~~~R  288 (288)
T PF14531_consen  281 LQRNPEDR  288 (288)
T ss_dssp             T-SSGGGS
T ss_pred             ccCCcccC
Confidence            99887543

>KOG0606|consensus

Probab=98.85  E-value=2.8e-09  Score=122.26  Aligned_cols=91  Identities=16%  Similarity=0.147  Sum_probs=66.7

Q ss_pred             CCCccccccCCHHHHHHHHHHHHHHHHHHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccc
Q psy9184         384 GNDSGDIKYRSPNQTYAMILQVVFSLAVAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTI  463 (562)
Q Consensus       384 G~ll~~l~~l~e~~i~~I~~QIl~aL~yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGL  463 (562)
                      ++++..+..++.+-        +.|++|||+ .||+|||+||+|.||+.-|                    ++|+.|||+
T Consensus       139 ~tllk~~g~lPvdm--------vla~Eylh~-ygivhrdlkpdnllIT~mG--------------------hiKlTDfgL  189 (1205)
T KOG0606|consen  139 ATLLKNIGPLPVDM--------VLAVEYLHS-YGIVHRDLKPDNLLITSMG--------------------HIKLTDFGL  189 (1205)
T ss_pred             hhhcccCCCCcchh--------hHHhHhhcc-CCeecCCCCCCcceeeecc--------------------cccccchhh
Confidence            34455544555433        789999999 7999999999999999998                    899999999


Q ss_pred             eeeecC--------------------CcEEEeecCCCccccCCCCCcHHHHHHHhhcccC
Q psy9184         464 SRCFVG--------------------EKICYYDLSQDEELFEGEGDYQFDMYRMMRKQCQ  503 (562)
Q Consensus       464 Sr~~~~--------------------~g~v~~~l~~~pelF~g~~~~q~dIy~lm~~~~~  503 (562)
                      ++....                    .++++++.|.+|++..-.+.-+-.-|+.||..++
T Consensus       190 sk~GLms~atnl~eg~I~k~t~Ef~dKqvcgTPeyiaPeVilrqgygkpvdwwamGiIly  249 (1205)
T KOG0606|consen  190 SKKGLMSLATNLKEGHIEKDTHEFQDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILY  249 (1205)
T ss_pred             hhhhhhhccchhhhcchHHHHHHhhhccccCCccccChhhhhhhccCCCccHHHHHHHHH
Confidence            876432                    4677889999998765443223233566776664

>PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases

Probab=98.81  E-value=3.5e-08  Score=95.71  Aligned_cols=128  Identities=18%  Similarity=0.106  Sum_probs=79.8

Q ss_pred             EEEE-----eeEEEEEeecCCCCCCc------------------chhHHHHHHHHHHHHHHHhcCCccccCCCCCCcccc
Q psy9184         277 VFKL-----NNSVIKIMPIEGDQSVN------------------GEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTE  333 (562)
Q Consensus       277 Vyka-----~~vAIKii~~~~~~~~~------------------~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~  333 (562)
                      ||.|     ..+|||+.+........                  ...........+|...|+++...             
T Consensus         2 Vy~~~~~~~~~~a~K~~r~~~~~Fk~~~~y~~~~~r~~~~~~~~~~~~~~~~~~~~E~~~L~~l~~~-------------   68 (188)
T PF01163_consen    2 VYHAIDPDGEEVAVKIYRTGRTSFKRRKKYRDYDYRFKKYRHKSSWRYLIREWAKKEFRNLKRLYEA-------------   68 (188)
T ss_dssp             EEEEEECTTEEEEEEEE-S---SS-HHHHHTTTSTTSTTC--G--CHHHHHHHHHHHHHHHHHCCCT-------------
T ss_pred             EEEEECCCCCEEEEEEeccCceEEEEeeeeecccchhcccccccCHHHHHHHHHHHHHHHHHHHHHC-------------
Confidence            7777     68999998875321110                  01112335677899999999872             


Q ss_pred             cccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecC-CCCCccccccCC--HHHHHHHHHHHHHHHH
Q psy9184         334 LLKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKN-GGNDSGDIKYRS--PNQTYAMILQVVFSLA  410 (562)
Q Consensus       334 l~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~-gG~ll~~l~~l~--e~~i~~I~~QIl~aL~  410 (562)
                              |..-|.++.   +.                 .-+|||||+. +|..+..+....  ..+...++.+++..+.
T Consensus        69 --------Gv~vP~p~~---~~-----------------~~~ivME~I~~~G~~~~~l~~~~~~~~~~~~~~~~il~~~~  120 (188)
T PF01163_consen   69 --------GVPVPKPYD---YN-----------------RNVIVMEYIGEDGVPLPRLKDVDLSPEEPKELLEEILEEII  120 (188)
T ss_dssp             --------T-SS--EEE---EE-----------------TTEEEEE--EETTEEGGCHHHCGGGGSTHHHHHHHHHHHHH
T ss_pred             --------CccCCcEEE---Ee-----------------CCEEEEEecCCCccchhhHHhccccchhHHHHHHHHHHHHH
Confidence                    101143332   11                 3479999997 344555554433  5677888899999766


Q ss_pred             HH-HhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeee
Q psy9184         411 VA-EVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCF  467 (562)
Q Consensus       411 yL-H~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~  467 (562)
                      .+ |. .||+|+||.+.|||+..+                     .+.|+|||.|...
T Consensus       121 ~~~~~-~givHGDLs~~NIlv~~~---------------------~~~iIDf~qav~~  156 (188)
T PF01163_consen  121 KMLHK-AGIVHGDLSEYNILVDDG---------------------KVYIIDFGQAVDS  156 (188)
T ss_dssp             HHHHC-TTEEESS-STTSEEEETT---------------------CEEE--GTTEEET
T ss_pred             HHHHh-cCceecCCChhhEEeecc---------------------eEEEEecCcceec
Confidence            64 67 899999999999999987                     5999999988654

Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A.

>KOG0590|consensus

Probab=98.80  E-value=8.3e-10  Score=124.53  Aligned_cols=179  Identities=19%  Similarity=0.226  Sum_probs=136.8

Q ss_pred             CCCCceeeeeeccCceEEEEE-------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCccc
Q psy9184         260 SSALKNCKKIGEGVYGEVFKL-------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFT  332 (562)
Q Consensus       260 ~~~y~~~~~LG~GsfG~Vyka-------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv  332 (562)
                      ...|.+.+.||+|+|+.|-.+       ..+|+|.+....      ........+..|..+-+.++.             
T Consensus        19 ~~~~~~~~~ig~gs~~~~~~~~~~~~~~~~~a~~~~s~~~------~~~~~~~~i~~e~~~~~~~s~-------------   79 (601)
T KOG0590|consen   19 NSQYKLSRSIGKGSFSSSALASNSRDPESSSATKPISIPP------KSEDSSEHIDTETDIQKKLSK-------------   79 (601)
T ss_pred             cccccccccccccccchhhhhhhcCCCcceeeccCCCCCC------CccchhhhcCccccccccccc-------------
Confidence            456788889999999999988       566777666543      122333455668877777773             


Q ss_pred             ccccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCcccc-c----cCCHHHHHHHHHHHHH
Q psy9184         333 ELLKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDI-K----YRSPNQTYAMILQVVF  407 (562)
Q Consensus       333 ~l~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l-~----~l~e~~i~~I~~QIl~  407 (562)
                                  |+|++..++...+             .+..++.++|..||++++.+ .    ..+...+..++.|+..
T Consensus        80 ------------h~n~~~~~~~~~~-------------~~~~~~~~~~s~g~~~f~~i~~~~~~~~~~~~~~~~~~ql~s  134 (601)
T KOG0590|consen   80 ------------HSNTVHMIEPSSS-------------PRSYLLSLSYSDGGSLFSKISHPDSTGTSSSSASRYLPQLNS  134 (601)
T ss_pred             ------------cccccccCCccCC-------------CcccccccCcccccccccccccCCccCCCCcchhhhhhhhcc
Confidence                        4999999887764             55789999999999998887 3    2667889999999999


Q ss_pred             HHHHHH-hhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecC-Cc-------EEE-eec
Q psy9184         408 SLAVAE-VELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVG-EK-------ICY-YDL  477 (562)
Q Consensus       408 aL~yLH-~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~-~g-------~v~-~~l  477 (562)
                      +|.|+| . .++.||||||+|.+++..+.                   .++++|||+|..... .|       -+. ..-
T Consensus       135 ~l~~~H~~-~~~~h~~ikP~n~~l~~s~~-------------------~l~~~df~~At~~~~~~g~~~~~~~~~g~s~~  194 (601)
T KOG0590|consen  135 GLSYLHPE-NGVTHRDIKPSNSLLDESGS-------------------ALKIADFGLATAYRNKNGAERSLKDRCGSSPP  194 (601)
T ss_pred             CccccCcc-cccccCCCCCccchhccCCC-------------------cccCCCchhhccccccCCcceeeecccCCCCC
Confidence            999999 7 79999999999999999862                   589999999987765 22       122 667


Q ss_pred             CCCccccCCC--CCcHHHHHHHhhccc
Q psy9184         478 SQDEELFEGE--GDYQFDMYRMMRKQC  502 (562)
Q Consensus       478 ~~~pelF~g~--~~~q~dIy~lm~~~~  502 (562)
                      |++||.+.+.  .....|+|+......
T Consensus       195 y~a~E~~~~~~~~~~~~d~~S~g~~l~  221 (601)
T KOG0590|consen  195 YGAPEHLSGKAYRGPSVDVWSLGIVLS  221 (601)
T ss_pred             CCCcccccchhhcCCCccccccccccc
Confidence            8889988883  233377777655554

>KOG2464|consensus

Probab=98.60  E-value=1e-07  Score=96.25  Aligned_cols=171  Identities=36%  Similarity=0.580  Sum_probs=133.1

Q ss_pred             CCCCCcccccccccccCCCCCCCceeehhhhhccccCCCCCCCCCC-CCeEEEEEEecCCCCCccccccCCHHHHHHHHH
Q psy9184         325 ENSTPCFTELLKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFE-EDQIFIILELKNGGNDSGDIKYRSPNQTYAMIL  403 (562)
Q Consensus       325 ~n~~p~fv~l~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~-~~~l~LVmE~~~gG~ll~~l~~l~e~~i~~I~~  403 (562)
                      .+..+++..+..+.++.|.||......  .+.-.+.++++.|..+. ..+.++++....++..+..+...+..++..++.
T Consensus        67 ~~~~~~~~~~~~~~~~~g~~p~~~~~~--~~~~~~~~~~~~~~~~~~~~q~~~~~~~~~~~~~l~~~~~~~~~~~~si~~  144 (246)
T KOG2464|consen   67 LNELQNFTNLLSIKVVAGKYPDFLLKA--LYLVEKESENDRPQKFSGDAQLYLALVVEKGGLGLEHYKLESKNQALSIFW  144 (246)
T ss_pred             hhhhhchheeeeEEeccCCCCchhhhh--hhhhhhcccccCccccccccceeeEEEEecCCccceecccccHHHHHHHHH
Confidence            344678899999999999998877766  33334566777788776 778888888888888888887789999999999


Q ss_pred             HHHHHHHHHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecCCcEEEeecCCCccc
Q psy9184         404 QVVFSLAVAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVGEKICYYDLSQDEEL  483 (562)
Q Consensus       404 QIl~aL~yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~~g~v~~~l~~~pel  483 (562)
                      |+...+.-.+.+.++.|||+++.|||++.++...                 .....+|             .........
T Consensus       145 q~~~~l~i~~~~~~~~hrdl~~gnili~k~~~~~-----------------~~~~~~~-------------~n~~~~~~~  194 (246)
T KOG2464|consen  145 QLVLSLAIAEKSLGFEHRDLHLGNILIKKTGRLL-----------------IPLIKDS-------------INLKDDAKK  194 (246)
T ss_pred             HHHHHHHHhhhhhcccccccCcCcEEEecccccc-----------------cccceeE-------------ecchhhhhh
Confidence            9999999999988999999999999999874100                 1111111             222223445


Q ss_pred             cCCCCCcHHHHHHHhhcccCCCCCCCCCCChhhhHHHHHHHHhh
Q psy9184         484 FEGEGDYQFDMYRMMRKQCQNNWQNFTPKNNVFWIHYLVDKATC  527 (562)
Q Consensus       484 F~g~~~~q~dIy~lm~~~~~~~W~~~~P~tn~~wl~yl~~~Ll~  527 (562)
                      +.+....+.++|..|.......|.-+.|.+++.|+.|..+.++.
T Consensus       195 ~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (246)
T KOG2464|consen  195 IKGNGNGVFDIYRLMFVKFDMSASLFKPADNLLWLDYLSDQLLK  238 (246)
T ss_pred             hcccceeEEEEeeecccccCcceeccccchhHHHHHHhhccccc
Confidence            56666667888888888889999999999999999999887776

>KOG0601|consensus

Probab=98.52  E-value=4.4e-08  Score=107.26  Aligned_cols=143  Identities=20%  Similarity=0.144  Sum_probs=109.6

Q ss_pred             CCCCceeeeeeccCceEEEEE-------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCccc
Q psy9184         260 SSALKNCKKIGEGVYGEVFKL-------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFT  332 (562)
Q Consensus       260 ~~~y~~~~~LG~GsfG~Vyka-------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv  332 (562)
                      ..+|..+..||.|.|+.|+.+       ..|++|.+......      ...-..-+.|+.+...+..             
T Consensus       264 ~~df~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~l~~------~~~di~sl~ev~l~~~l~~-------------  324 (524)
T KOG0601|consen  264 LTDFGLVSKISDGNFSSVFKVSKRPEGDCIYAAKELLNGLAT------FASDIFSLGEVILEAILGS-------------  324 (524)
T ss_pred             cCCcceeEEccCCccccceeeeecCCCCceEeChhhhccccc------hHhhhcchhhhhHhhHhhc-------------
Confidence            457889999999999999997       78888887764311      1111223566666666665             


Q ss_pred             ccccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc---cCCHHHHHHHHHHHHHHH
Q psy9184         333 ELLKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK---YRSPNQTYAMILQVVFSL  409 (562)
Q Consensus       333 ~l~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~---~l~e~~i~~I~~QIl~aL  409 (562)
                                  |.++++++..|..             ..+.|+-.|||.+|++.....   .+.+...+.+..|++.|+
T Consensus       325 ------------~~~~~g~~~~W~~-------------~r~~~ip~e~~~~~s~~l~~~~~~~~d~~~~~~~~~q~~~~l  379 (524)
T KOG0601|consen  325 ------------HLPSVGKNSSWSQ-------------LRQGYIPLEFCEGGSSSLRSVTSQMLDEDPRLRLTAQILTAL  379 (524)
T ss_pred             ------------ccccCCCCCCccc-------------cccccCchhhhcCcchhhhhHHHHhcCcchhhhhHHHHHhcc
Confidence                        5777877777654             457789999999886643332   378899999999999999


Q ss_pred             HHHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceee
Q psy9184         410 AVAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRC  466 (562)
Q Consensus       410 ~yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~  466 (562)
                      .++|+ ..++|+|+||+||++..++                   +..++.|||....
T Consensus       380 ~~i~s-~~~~~~d~~psni~i~~~~-------------------~~~~~~~~~~~t~  416 (524)
T KOG0601|consen  380 NVIHS-KLFVHLDVKPSNILISNDG-------------------FFSKLGDFGCWTR  416 (524)
T ss_pred             ccccc-hhhhcccccccceeeccch-------------------hhhhccccccccc
Confidence            99999 7999999999999999974                   2678899998864

>PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional

Probab=98.48  E-value=2.3e-06  Score=87.56  Aligned_cols=80  Identities=18%  Similarity=0.167  Sum_probs=60.2

Q ss_pred             eEEEEEEecCCCCCccccc------cCCHHHHHHHHHHHHHHHHHHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcc
Q psy9184         373 QIFIILELKNGGNDSGDIK------YRSPNQTYAMILQVVFSLAVAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTH  446 (562)
Q Consensus       373 ~l~LVmE~~~gG~ll~~l~------~l~e~~i~~I~~QIl~aL~yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~  446 (562)
                      .-+||||++++-..+..+.      ..+......++.+++..+.-||. .||+|+||++.|||++.+..           
T Consensus       109 ~s~LVte~l~~~~sL~~~~~~~~~~~~~~~~~~~ll~~la~~i~~LH~-~Gi~HgDL~~~NiLl~~~~~-----------  176 (268)
T PRK15123        109 TSFIITEDLAPTISLEDYCADWATNPPDPRLKRMLIKRVATMVRDMHA-AGINHRDCYICHFLLHLPFP-----------  176 (268)
T ss_pred             eeEEEEeeCCCCccHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHH-CcCccCCCChhhEEEecccc-----------
Confidence            5789999998654554432      24556778999999999999999 79999999999999985200           


Q ss_pred             cccccCCceEEEEeccceee
Q psy9184         447 YAMKTAGVQVTIIDFTISRC  466 (562)
Q Consensus       447 ~~~~~~g~~vKL~DFGLSr~  466 (562)
                        ....+..+.||||+.++.
T Consensus       177 --~~~~~~~~~LIDl~r~~~  194 (268)
T PRK15123        177 --GREEDLKLSVIDLHRAQI  194 (268)
T ss_pred             --CCCCCceEEEEECCcccc
Confidence              000013799999998864

>KOG0601|consensus

Probab=98.45  E-value=7.6e-08  Score=105.44  Aligned_cols=185  Identities=15%  Similarity=0.211  Sum_probs=132.5

Q ss_pred             CCCceeeeeec--cCceEEEEE--------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCc
Q psy9184         261 SALKNCKKIGE--GVYGEVFKL--------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPC  330 (562)
Q Consensus       261 ~~y~~~~~LG~--GsfG~Vyka--------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~  330 (562)
                      ..+...+.+|.  |.+|.||.+        ..+|+|.-+....    + .... ..=.+|+...+.++.           
T Consensus       114 ~~~~~~~~~g~~~g~~~s~~~~~~~~~~s~~~~a~k~s~~p~s----~-p~~~-~~k~~~~~s~~~i~~-----------  176 (524)
T KOG0601|consen  114 QRFPISSRTGSLPGSKGSVFKSRCTNSESPHKFAVKKSKIPFS----P-PLDS-KRKLREFLSHHKIDS-----------  176 (524)
T ss_pred             hhcccccccccCCCCCceeecccCCcccCCcccccccccCCCC----C-cccc-ccccchhhcccccCc-----------
Confidence            44667789999  999999999        6888887333221    0 0111 122456665555554           


Q ss_pred             ccccccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc-----cCCHHHHHHHHHHH
Q psy9184         331 FTELLKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK-----YRSPNQTYAMILQV  405 (562)
Q Consensus       331 fv~l~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~-----~l~e~~i~~I~~QI  405 (562)
                                    |++.++.+..|..             .+.+|+-.|+|.  ..+..+.     .++...++.++.+.
T Consensus       177 --------------~~~~v~~~~~~e~-------------~~~lfiqtE~~~--~sl~~~~~~~~~~~p~~~l~~~~~~~  227 (524)
T KOG0601|consen  177 --------------HENPVRDSPAWEG-------------SGILFIQTELCG--ESLQSYCHTPCNFLPDNLLWNSLRDW  227 (524)
T ss_pred             --------------cccccccCccccc-------------CCcceeeecccc--chhHHhhhcccccCCchhhhhHHhhh
Confidence                          6888887777764             668999999995  3433332     38899999999999


Q ss_pred             HH----HHHHHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecCCc------EEE-
Q psy9184         406 VF----SLAVAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVGEK------ICY-  474 (562)
Q Consensus       406 l~----aL~yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~~g------~v~-  474 (562)
                      ..    ||.++|. .+|+|-|+||+||++..+..                   ..+++|||+...+.+..      +.. 
T Consensus       228 ~~~~~~al~~~hs-~~~~~~~~kp~~i~~~~~~~-------------------s~~~~df~~v~~i~~~~~~~~~~~~~r  287 (524)
T KOG0601|consen  228 LSRDVTALSHLHS-NNIVHDDLKPANIFTTSDWT-------------------SCKLTDFGLVSKISDGNFSSVFKVSKR  287 (524)
T ss_pred             hhcccccccccCC-Ccccccccchhheecccccc-------------------eeecCCcceeEEccCCccccceeeeec
Confidence            99    9999999 79999999999999998832                   68889999888776522      111 


Q ss_pred             ---eecCCCccccCCCCCcHHHHHHHhhccc-------------CCCCCCCCC
Q psy9184         475 ---YDLSQDEELFEGEGDYQFDMYRMMRKQC-------------QNNWQNFTP  511 (562)
Q Consensus       475 ---~~l~~~pelF~g~~~~q~dIy~lm~~~~-------------~~~W~~~~P  511 (562)
                         -..|+++++..+......|||.++-...             ...|..+.+
T Consensus       288 ~~~~~~Y~~ke~~~~l~~~~~di~sl~ev~l~~~l~~~~~~~g~~~~W~~~r~  340 (524)
T KOG0601|consen  288 PEGDCIYAAKELLNGLATFASDIFSLGEVILEAILGSHLPSVGKNSSWSQLRQ  340 (524)
T ss_pred             CCCCceEeChhhhccccchHhhhcchhhhhHhhHhhcccccCCCCCCcccccc
Confidence               1246788888887777788887765554             357766655

>COG0478 RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms]

Probab=98.38  E-value=2.6e-06  Score=86.29  Aligned_cols=139  Identities=15%  Similarity=0.106  Sum_probs=94.7

Q ss_pred             CceeeeeeccCceEEEEE-----eeEEEEEeecCCCCCCc----------c----hhHHHHHHHHHHHHHHHhcCCcccc
Q psy9184         263 LKNCKKIGEGVYGEVFKL-----NNSVIKIMPIEGDQSVN----------G----EEQKKFREIFSEIMVTKETSDLQYR  323 (562)
Q Consensus       263 y~~~~~LG~GsfG~Vyka-----~~vAIKii~~~~~~~~~----------~----~~~~~~~~il~Ei~ilk~L~h~~~~  323 (562)
                      ..+...||.|-=|.||.|     ..+|||.-+....+...          .    .-.-....+.+|..+|+.|...   
T Consensus        93 e~iG~~IGvGKEsdVY~~~~~~g~~~~vKfHR~GrtsFrkvk~~R~y~~~~~h~sWl~~sRl~A~rEf~~L~~L~~~---  169 (304)
T COG0478          93 EAIGTKIGVGKESDVYVAIDPKGRKVAVKFHRLGRTSFRKVKRNRDYLADKEHGSWLYVSRLAAEREFEALQRLYPE---  169 (304)
T ss_pred             HhhccccccCccceEEEEECCCCCEEEEEEeecCchhhhhhcchhhhhccccCcchhhhHHHHHHHHHHHHHHhhhc---
Confidence            346789999999999999     89999987654321110          0    0011235567899999988751   


Q ss_pred             CCCCCCcccccccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccccCCHHHHHHHHH
Q psy9184         324 TENSTPCFTELLKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIKYRSPNQTYAMIL  403 (562)
Q Consensus       324 ~~n~~p~fv~l~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~~l~e~~i~~I~~  403 (562)
                                        |    .                ..|..+..+...+||||.+|-.+ ..+. ++......++.
T Consensus       170 ------------------G----~----------------~VP~P~~~nRHaVvMe~ieG~eL-~~~r-~~~en~~~il~  209 (304)
T COG0478         170 ------------------G----V----------------KVPKPIAWNRHAVVMEYIEGVEL-YRLR-LDVENPDEILD  209 (304)
T ss_pred             ------------------C----C----------------CCCCccccccceeeeehccccee-eccc-CcccCHHHHHH
Confidence                              0    0                11455567788999999997533 3333 13444455555


Q ss_pred             HHHHHHHHHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEecccee
Q psy9184         404 QVVFSLAVAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISR  465 (562)
Q Consensus       404 QIl~aL~yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr  465 (562)
                      .|+.-+.-+-. .||||+|+.+=|||++.+|                    .+.++||--+.
T Consensus       210 ~il~~~~~~~~-~GiVHGDlSefNIlV~~dg--------------------~~~vIDwPQ~v  250 (304)
T COG0478         210 KILEEVRKAYR-RGIVHGDLSEFNILVTEDG--------------------DIVVIDWPQAV  250 (304)
T ss_pred             HHHHHHHHHHH-cCccccCCchheEEEecCC--------------------CEEEEeCcccc
Confidence            55555555556 7999999999999999997                    69999996543

>KOG1033|consensus

Probab=98.32  E-value=6.5e-08  Score=104.54  Aligned_cols=103  Identities=21%  Similarity=0.225  Sum_probs=85.2

Q ss_pred             CeEEEEEEecCCCCCccccc------cCCHHHHHHHHHHHHHHHHHHHhhCCeEeccCCCCCEEEccCCCCCcccccCCc
Q psy9184         372 DQIFIILELKNGGNDSGDIK------YRSPNQTYAMILQVVFSLAVAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDT  445 (562)
Q Consensus       372 ~~l~LVmE~~~gG~ll~~l~------~l~e~~i~~I~~QIl~aL~yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~  445 (562)
                      ..+||.|++|.-+++-+.+.      ..+...+..++.|++.|+.|   + +.+|||+||.||.+..++           
T Consensus       329 ~~lyI~Mn~c~~~tledWl~rr~~~e~~s~s~~~~~~~q~~~~~~y---k-~~ihrdlkp~nif~~~d~-----------  393 (516)
T KOG1033|consen  329 VYLYIQMNLCEKETLEDWLRRRRTGEERSLSLMLDIFKQIAPAVEY---K-GLIHRDLKPSNIFFSDDD-----------  393 (516)
T ss_pred             cchhhhhhhhhhhhHHHHhhCCCcccccchhHHHHHHHhhccchhh---c-cchhhhccccccccccch-----------
Confidence            36899999999876655553      26678899999999999999   3 999999999999999886           


Q ss_pred             ccccccCCceEEEEeccceeeecCC-----------cEEEeecCCCccccCC-CCCcHHHHHHHh
Q psy9184         446 HYAMKTAGVQVTIIDFTISRCFVGE-----------KICYYDLSQDEELFEG-EGDYQFDMYRMM  498 (562)
Q Consensus       446 ~~~~~~~g~~vKL~DFGLSr~~~~~-----------g~v~~~l~~~pelF~g-~~~~q~dIy~lm  498 (562)
                               .+||.|||+.......           .-+++.+||.||-..| .+..+.|||.+.
T Consensus       394 ---------q~kIgDFgl~ts~~~~~~~~~~~a~~t~~~gt~~YmsPEQi~g~~y~~kvdIyaLG  449 (516)
T KOG1033|consen  394 ---------QLKIGDFGLVTSQDKDETVAPAAASHTQQVGTLLYMSPEQIRGQQYSEKVDIYALG  449 (516)
T ss_pred             ---------hhhhhhhhheeecccCCcccchhhhhhhcccccccCCHHHHhhhhhhhhcchhhHH
Confidence                     7999999998776542           3567889999998887 577788998863

>PF06176 WaaY: Lipopolysaccharide core biosynthesis protein (WaaY); InterPro: IPR009330 This family consists of several bacterial lipopolysaccharide core biosynthesis proteins (WaaY or RfaY)

Probab=98.32  E-value=9.1e-06  Score=80.56  Aligned_cols=144  Identities=17%  Similarity=0.149  Sum_probs=89.3

Q ss_pred             CCCCceeeeeeccCceEEEEE----eeEEEEEeecCCCCCCcchhHHHHHH------HHHHHHHHHhcCCccccCCCCCC
Q psy9184         260 SSALKNCKKIGEGVYGEVFKL----NNSVIKIMPIEGDQSVNGEEQKKFRE------IFSEIMVTKETSDLQYRTENSTP  329 (562)
Q Consensus       260 ~~~y~~~~~LG~GsfG~Vyka----~~vAIKii~~~~~~~~~~~~~~~~~~------il~Ei~ilk~L~h~~~~~~n~~p  329 (562)
                      ..+|...+.+-......|.+.    ..+++|.-....     .-.++.+..      ..+++..+.++..         -
T Consensus        30 ~~~~~~~kv~k~~~r~~ValIei~~~kyIlK~pr~~~-----~r~er~~~sf~kg~~~~~l~~~~~~i~~---------~   95 (229)
T PF06176_consen   30 DNNYKIIKVFKNTKRNYVALIEIDGKKYILKEPREEN-----RRPERRFKSFFKGSEYSRLINNTDKIRN---------E   95 (229)
T ss_pred             hCCceEEEeecCCCccEEEEEEECCcEEEEeccchhh-----hhHHHHHHHHhccHHHHHHHHHHHHHHH---------c
Confidence            467888888888888888877    888999766542     112222222      2344444444433         1


Q ss_pred             cccccccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccccCCHHHHHHHHHHHHHHH
Q psy9184         330 CFTELLKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIKYRSPNQTYAMILQVVFSL  409 (562)
Q Consensus       330 ~fv~l~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~~l~e~~i~~I~~QIl~aL  409 (562)
                      ||..+-+.+++..+-      -+.                .....+++|||++|-.+.+. ..+++    .+...|..++
T Consensus        96 g~~~~~~~yl~~ekk------~~~----------------~~~~~~ll~EYIeG~~l~d~-~~i~e----~~~~ki~~~i  148 (229)
T PF06176_consen   96 GFTEPADPYLAAEKK------IFR----------------YTSSYVLLMEYIEGVELNDI-EDIDE----DLAEKIVEAI  148 (229)
T ss_pred             Cccccccceeeeeee------ecc----------------ceeEEEEEEEEecCeecccc-hhcCH----HHHHHHHHHH
Confidence            222222222211100      010                12255789999997655432 22333    2445677889


Q ss_pred             HHHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceee
Q psy9184         410 AVAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRC  466 (562)
Q Consensus       410 ~yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~  466 (562)
                      .-+|+ .|+.|+|.+|.|+++..+                     .++++||+-.+.
T Consensus       149 kqlH~-~G~~HGD~hpgNFlv~~~---------------------~i~iID~~~k~~  183 (229)
T PF06176_consen  149 KQLHK-HGFYHGDPHPGNFLVSNN---------------------GIRIIDTQGKRM  183 (229)
T ss_pred             HHHHH-cCCccCCCCcCcEEEECC---------------------cEEEEECccccc
Confidence            99999 799999999999999976                     499999987664

The waaY, waaQ, and waaP genes are located in the central operon of the waa (formerly rfa) locus on the chromosome of Escherichia coli. This locus contains genes whose products are involved in the assembly of the core region of the lipopolysaccharide molecule. WaaY is the enzyme that phosphorylates HepII in this system [].; GO: 0009244 lipopolysaccharide core region biosynthetic process

>PF06293 Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family; InterPro: IPR010440 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases

Probab=98.26  E-value=3.1e-06  Score=83.04  Aligned_cols=77  Identities=26%  Similarity=0.277  Sum_probs=63.8

Q ss_pred             eEEEEEEecCCCCCcccccc----CCHHHHHHHHHHHHHHHHHHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccc
Q psy9184         373 QIFIILELKNGGNDSGDIKY----RSPNQTYAMILQVVFSLAVAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYA  448 (562)
Q Consensus       373 ~l~LVmE~~~gG~ll~~l~~----l~e~~i~~I~~QIl~aL~yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~  448 (562)
                      ..++|+|+++|-..+..+..    .+......++.+++..++-||+ .||+|+|++|.|||++.++.             
T Consensus        91 ~s~lite~l~~~~~L~~~~~~~~~~~~~~~~~ll~~l~~~i~~lH~-~gi~H~Dl~~~NILv~~~~~-------------  156 (206)
T PF06293_consen   91 RSYLITEALPGAQDLRDLLQQWEQLDPSQRRELLRALARLIAKLHD-AGIYHGDLNPSNILVDPDDG-------------  156 (206)
T ss_pred             eEEEEEEeCCCcccHHHHHHhhcccchhhHHHHHHHHHHHHHHHHH-CcCCCCCCCcccEEEeCCCC-------------
Confidence            56899999997655555432    5677888999999999999999 79999999999999998852             


Q ss_pred             cccCCceEEEEeccceeee
Q psy9184         449 MKTAGVQVTIIDFTISRCF  467 (562)
Q Consensus       449 ~~~~g~~vKL~DFGLSr~~  467 (562)
                          ...+.++||+-++..
T Consensus       157 ----~~~~~lIDld~~~~~  171 (206)
T PF06293_consen  157 ----QYRFYLIDLDRMRFR  171 (206)
T ss_pred             ----ceeEEEEcchhceeC
Confidence                137999999988753

Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents lipopolysaccharide kinases which are related to protein kinases IPR000719 from INTERPRO. This family includes waaP (rfaP) gene product is required for the addition of phosphate to O-4 of the first heptose residue of the lipopolysaccharide (LPS) inner core region. It has previously been shown that WaaP is necessary for resistance to hydrophobic and polycationic antimicrobials in E. coli and that it is required for virulence in invasive strains of Salmonella enterica [].; GO: 0005524 ATP binding, 0016773 phosphotransferase activity, alcohol group as acceptor, 0009103 lipopolysaccharide biosynthetic process, 0016020 membrane

>TIGR02172 Fb_sc_TIGR02172 Fibrobacter succinogenes paralogous family TIGR02172

Probab=98.13  E-value=1.4e-05  Score=79.84  Aligned_cols=45  Identities=18%  Similarity=0.211  Sum_probs=34.0

Q ss_pred             eeeeeeccCceEEEEE--eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCC
Q psy9184         265 NCKKIGEGVYGEVFKL--NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSD  319 (562)
Q Consensus       265 ~~~~LG~GsfG~Vyka--~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h  319 (562)
                      ....||.|..+.||++  ..+++|+.+...          ....+.+|.++++.+..
T Consensus         5 ~~~~i~~G~t~~~y~~~~~~~VlR~~~~~~----------~~~~i~~E~~~l~~l~~   51 (226)
T TIGR02172         5 DWTQTGEGGNGESYTHKTGKWMLKLYNPGF----------DKETIKREFDASRKVFS   51 (226)
T ss_pred             HheeecCCCCcceeEecCCCEEEEeCCCCC----------CHHHHHHHHHHHHHHHH
Confidence            3478999999999996  677888876432          11346889999998875

This model describes a paralogous family of five proteins, likely to be enzymes, in the rumen bacterium Fibrobacter succinogenes S85. Members show homology to proteins described by PFAM model pfam01636, a phosphotransferase enzyme family associated with resistance to aminoglycoside antibiotics. However, members of this family score below the current trusted and noise cutoffs for pfam01636.

>KOG0195|consensus

Probab=98.03  E-value=1.5e-06  Score=87.26  Aligned_cols=169  Identities=17%  Similarity=0.189  Sum_probs=125.2

Q ss_pred             CCceeeeeeccCceEEEEE----eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCcccccccc
Q psy9184         262 ALKNCKKIGEGVYGEVFKL----NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTELLKC  337 (562)
Q Consensus       262 ~y~~~~~LG~GsfG~Vyka----~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~l~~~  337 (562)
                      ...++.+|.+...|+.|+|    ..++.|++....      .....-.+|..|.-.|+-++|                  
T Consensus       191 ~lnl~tkl~e~hsgelwrgrwqgndivakil~vr~------~t~risrdfneefp~lrifsh------------------  246 (448)
T KOG0195|consen  191 SLNLITKLAESHSGELWRGRWQGNDIVAKILNVRE------VTARISRDFNEEFPALRIFSH------------------  246 (448)
T ss_pred             hhhhhhhhccCCCcccccccccCcchhhhhhhhhh------cchhhcchhhhhCcceeeecC------------------
Confidence            3456788999999999999    788888887652      223334567788888888888                  


Q ss_pred             cccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCcccccc-----CCHHHHHHHHHHHHHHHHHH
Q psy9184         338 SCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIKY-----RSPNQTYAMILQVVFSLAVA  412 (562)
Q Consensus       338 ~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~~-----l~e~~i~~I~~QIl~aL~yL  412 (562)
                              |||+.+++.+..             ...+.++..|++-|+++..+..     .+..++..++..++.|++||
T Consensus       247 --------pnilpvlgacns-------------ppnlv~isq~mp~gslynvlhe~t~vvvd~sqav~faldiargmafl  305 (448)
T KOG0195|consen  247 --------PNILPVLGACNS-------------PPNLVIISQYMPFGSLYNVLHEQTSVVVDHSQAVRFALDIARGMAFL  305 (448)
T ss_pred             --------CchhhhhhhccC-------------CCCceEeeeeccchHHHHHHhcCccEEEecchHHHHHHHHHhhHHHH
Confidence                    999999988875             3478899999999988776643     66789999999999999999


Q ss_pred             HhhCC-eEec-cCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecCCcEEEeecCCCccccCCCC-C
Q psy9184         413 EVELE-FEHR-DLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVGEKICYYDLSQDEELFEGEG-D  489 (562)
Q Consensus       413 H~~~~-IiHR-DLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~~g~v~~~l~~~pelF~g~~-~  489 (562)
                      |+ .. ++-| -|....++|+.+-.                  ..+..+|--+|-  ...|-.|.+.|++||.++... +
T Consensus       306 hs-lep~ipr~~lns~hvmidedlt------------------arismad~kfsf--qe~gr~y~pawmspealqrkped  364 (448)
T KOG0195|consen  306 HS-LEPMIPRFYLNSKHVMIDEDLT------------------ARISMADTKFSF--QEVGRAYSPAWMSPEALQRKPED  364 (448)
T ss_pred             hh-cchhhhhhhcccceEEecchhh------------------hheecccceeee--eccccccCcccCCHHHHhcCchh
Confidence            99 55 4433 57888899988741                  134444544442  346788999999999877632 2


Q ss_pred             ---cHHHHHH
Q psy9184         490 ---YQFDMYR  496 (562)
Q Consensus       490 ---~q~dIy~  496 (562)
                         ..+|+|+
T Consensus       365 ~n~raadmws  374 (448)
T KOG0195|consen  365 LNIRAADMWS  374 (448)
T ss_pred             cchhhhhHHH
Confidence               1266655

>KOG1243|consensus

Probab=98.02  E-value=1.7e-05  Score=88.37  Aligned_cols=120  Identities=8%  Similarity=0.117  Sum_probs=97.6

Q ss_pred             eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCcccccccccccCCCCCCCceeehhhhhcccc
Q psy9184         281 NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTELLKCSCVRGRYPDRLVTLWEEFAKTKK  360 (562)
Q Consensus       281 ~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~l~~~~iv~g~~~pnIv~l~~~f~~~~~  360 (562)
                      .+|.|...+...     +   ...+.+.+-+.-|+.|+|                          |+|+++++.++.   
T Consensus        38 ~~vsVF~~~~~~-----~---~~~~~~~~A~k~lKtlRH--------------------------P~Il~yL~t~e~---   80 (690)
T KOG1243|consen   38 GPVSVFVYKRSN-----G---EVTELAKRAVKRLKTLRH--------------------------PNILSYLDTTEE---   80 (690)
T ss_pred             CceEEEEEeCCC-----c---hhhHHHHHHHHHhhhccC--------------------------chhhhhhhhhcc---
Confidence            566777776653     2   233456677888899998                          999999999986   


Q ss_pred             CCCCCCCCCCCCeEEEEEEecCCCCCccccccCCHHHHHHHHHHHHHHHHHHHhhCCeEeccCCCCCEEEccCCCCCccc
Q psy9184         361 SYNDHPSMFEEDQIFIILELKNGGNDSGDIKYRSPNQTYAMILQVVFSLAVAEVELEFEHRDLHMSNILVLQTDQDESSF  440 (562)
Q Consensus       361 s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~~l~e~~i~~I~~QIl~aL~yLH~~~~IiHRDLKpeNILl~~~~~~~~~~  440 (562)
                                ++.+|||.|-+.  .+-..+..+....+...++||+.||.|||++++++|..|-.+-|+++..|      
T Consensus        81 ----------~~~~ylvTErV~--Pl~~~lk~l~~~~v~~Gl~qIl~AL~FL~~d~~lvHgNv~~~SVfVn~~G------  142 (690)
T KOG1243|consen   81 ----------EGTLYLVTERVR--PLETVLKELGKEEVCLGLFQILAALSFLNDDCNLVHGNVCKDSVFVNESG------  142 (690)
T ss_pred             ----------cCceEEEeeccc--cHHHHHHHhHHHHHHHHHHHHHHHHHHHhccCCeeeccEeeeeEEEcCCC------
Confidence                      559999999984  45556667888888999999999999999778999999999999999998      


Q ss_pred             ccCCcccccccCCceEEEEeccceeeecC
Q psy9184         441 TLDDTHYAMKTAGVQVTIIDFTISRCFVG  469 (562)
Q Consensus       441 ~~~~~~~~~~~~g~~vKL~DFGLSr~~~~  469 (562)
                                    .-||++|-++.....
T Consensus       143 --------------eWkLggle~v~~~~~  157 (690)
T KOG1243|consen  143 --------------EWKLGGLELVSKASG  157 (690)
T ss_pred             --------------cEEEeeeEEEecccc
Confidence                          689999988765544

>COG0661 AarF Predicted unusual protein kinase [General function prediction only]

Probab=97.98  E-value=6.6e-06  Score=91.30  Aligned_cols=82  Identities=22%  Similarity=0.259  Sum_probs=52.7

Q ss_pred             CCCCCCC--CeEEEEEEecCCCCCccc--ccc--CCHHHHHHHHHHHHHHHHHHHhhCCeEeccCCCCCEEEccCCCCCc
Q psy9184         365 HPSMFEE--DQIFIILELKNGGNDSGD--IKY--RSPNQTYAMILQVVFSLAVAEVELEFEHRDLHMSNILVLQTDQDES  438 (562)
Q Consensus       365 ~p~~~~~--~~l~LVmE~~~gG~ll~~--l~~--l~e~~i~~I~~QIl~aL~yLH~~~~IiHRDLKpeNILl~~~~~~~~  438 (562)
                      .|..+.+  +.-.|+|||++|-.+.+.  +..  ++...+...+.++.  +.-+=. .|+.|.|.||.||++..++    
T Consensus       230 VP~V~we~t~~~VLtmE~i~Gi~i~d~~~l~~~g~d~k~ia~~~~~~f--~~q~~~-dgffHaDpHpGNi~v~~~g----  302 (517)
T COG0661         230 VPKVYWEYTTRRVLTMEWIDGIKISDIAALKSAGIDRKELAELLVRAF--LRQLLR-DGFFHADPHPGNILVRSDG----  302 (517)
T ss_pred             eceeehhccCCcEEEEEeeCCEecccHHHHHhcCCCHHHHHHHHHHHH--HHHHHh-cCccccCCCccceEEecCC----
Confidence            3555533  567899999996544332  121  44333322222221  112222 5999999999999999997    


Q ss_pred             ccccCCcccccccCCceEEEEeccceeeecC
Q psy9184         439 SFTLDDTHYAMKTAGVQVTIIDFTISRCFVG  469 (562)
Q Consensus       439 ~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~  469 (562)
                                      .+.+.|||+...+.+
T Consensus       303 ----------------~i~~lDfGi~g~l~~  317 (517)
T COG0661         303 ----------------RIVLLDFGIVGRLDP  317 (517)
T ss_pred             ----------------cEEEEcCcceecCCH
Confidence                            799999999987765

>KOG1023|consensus

Probab=97.90  E-value=7.1e-06  Score=89.86  Aligned_cols=108  Identities=19%  Similarity=0.108  Sum_probs=85.9

Q ss_pred             CCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc----cCCHHHHHHHHHHHHHHHHHHHhhCCeEec
Q psy9184         346 DRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK----YRSPNQTYAMILQVVFSLAVAEVELEFEHR  421 (562)
Q Consensus       346 pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~----~l~e~~i~~I~~QIl~aL~yLH~~~~IiHR  421 (562)
                      .|+.++++...+             +...++|-+||..|++.+.+.    .+++.-...+++.|+.||.|+|......|+
T Consensus         7 ~n~~~f~g~~~~-------------~~~~~~i~~~c~rGsl~D~i~~~~~~~d~~F~~s~~rdi~~Gl~ylh~s~i~~hg   73 (484)
T KOG1023|consen    7 DNLNKFIGASVD-------------GPEMIVIWEYCSRGSLLDILSNEDIKLDYFFILSFIRDISKGLAYLHNSPIGYHG   73 (484)
T ss_pred             hhhhhheeeEec-------------CCceEEEEeeecCccHHhHHhccccCccHHHHHHHHHHHHHHHHHHhcCcceeee
Confidence            788888777664             458899999999999988764    377888899999999999999995334999


Q ss_pred             cCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecC-------CcEEEeecCCCccccCC
Q psy9184         422 DLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVG-------EKICYYDLSQDEELFEG  486 (562)
Q Consensus       422 DLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~-------~g~v~~~l~~~pelF~g  486 (562)
                      -|+..|.+++..                    +.+||+|||+......       ......-+|.+||+..+
T Consensus        74 ~l~s~nClvd~~--------------------w~lklt~~Gl~~~~~~~~~~~~~~~~~~~~lw~aPellr~  125 (484)
T KOG1023|consen   74 ALKSSNCLVDSR--------------------WVLKLTDFGLNSLLEETAEPEAHHPIRKALLWTAPELLRG  125 (484)
T ss_pred             eeccccceeeee--------------------EEEEechhhhcccccccccccccchhHHHHhccCHHHhcc
Confidence            999999999998                    4899999999887742       00111346778887766

>PRK09902 hypothetical protein; Provisional

Probab=97.88  E-value=9.8e-05  Score=72.92  Aligned_cols=177  Identities=16%  Similarity=0.064  Sum_probs=113.2

Q ss_pred             eccCceEEEEE----eeEEEEEeecCCC-CCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCcccccccccccCCCC
Q psy9184         270 GEGVYGEVFKL----NNSVIKIMPIEGD-QSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTELLKCSCVRGRY  344 (562)
Q Consensus       270 G~GsfG~Vyka----~~vAIKii~~~~~-~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~l~~~~iv~g~~  344 (562)
                      |+||-+-|+..    ..+=+|.-..... ..-.   +--...+.+|+..++.|..+.               +-+     
T Consensus        27 ~rgG~SgV~r~~~~g~~~ylKrq~nhl~~s~r~---P~g~ptf~rE~~~L~~L~~~G---------------vPV-----   83 (216)
T PRK09902         27 RRNGMSGVQCVERNGKKLYVKRMTHHLFHSVRY---PFGRPTIVREVAVIKELERAG---------------VIV-----   83 (216)
T ss_pred             CCCCcceEEEEEeCCcEEEEEeccCcccccccC---CCCchHHHHHHHHHHHHHHcC---------------CCC-----
Confidence            56888888887    5577776542110 0000   112346789999999988721               111     


Q ss_pred             CCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc------cCCHHHHHHHHHHHHHHHHHHHhhCCe
Q psy9184         345 PDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK------YRSPNQTYAMILQVVFSLAVAEVELEF  418 (562)
Q Consensus       345 ~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~------~l~e~~i~~I~~QIl~aL~yLH~~~~I  418 (562)
                       |.++ +.+.-..        |   ..-+-+||+|-+.|-.+++.+.      ..+..+...++.+|+.+++-||+ .|+
T Consensus        84 -P~pv-f~~~~k~--------~---~~~rA~LVTe~L~g~~~L~~~l~~~~~~~~~~~~k~~il~~va~~ia~LH~-~Gv  149 (216)
T PRK09902         84 -PKIV-FGEAVKI--------E---GEWRALLVTEDMAGFISIADWYAQHAVSPYSDEVRQAMLKAVALAFKKMHS-VNR  149 (216)
T ss_pred             -Cccc-eeeeecc--------C---CceEEEEEEEeCCCCccHHHHHhcCCcCCcchHHHHHHHHHHHHHHHHHHH-CCC
Confidence             3333 2211111        1   1336799999887767776542      24666778999999999999999 799


Q ss_pred             EeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecCCcEEEeecCCCccccCCCCCcHHHHHHHh
Q psy9184         419 EHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVGEKICYYDLSQDEELFEGEGDYQFDMYRMM  498 (562)
Q Consensus       419 iHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~~g~v~~~l~~~pelF~g~~~~q~dIy~lm  498 (562)
                      .|+|+-+.|||++..+.                  +.++++||--++..               +|.. .....|+..+.
T Consensus       150 ~Hgdly~khIll~~~g~------------------~~v~lIDlEk~r~~---------------l~~~-~~~~~Dl~~l~  195 (216)
T PRK09902        150 QHGCCYVRHIYVKTEGK------------------AEAGFLDLEKSRRR---------------LRRD-KAINHDFRQLE  195 (216)
T ss_pred             cCCCCCHhheeecCCCC------------------eeEEEEEhhccchh---------------hhhh-hhhHhHHHHHH
Confidence            99999999999986652                  36999999877643               1211 12235776666


Q ss_pred             hcccCCCCCCCCCCChhhhHHHHHHHH
Q psy9184         499 RKQCQNNWQNFTPKNNVFWIHYLVDKA  525 (562)
Q Consensus       499 ~~~~~~~W~~~~P~tn~~wl~yl~~~L  525 (562)
                      +...        +++...|..++..++
T Consensus       196 r~~~--------~~s~~~~~~~~~~y~  214 (216)
T PRK09902        196 KYLE--------PIPKADWEQVKAYYY  214 (216)
T ss_pred             Hhcc--------CCCHHHHHHHHHHHh
Confidence            4421        235667777776665

>PF01636 APH: Phosphotransferase enzyme family This family is part of the larger protein kinase superfamily

Probab=97.88  E-value=0.00013  Score=70.72  Aligned_cols=44  Identities=14%  Similarity=0.275  Sum_probs=35.3

Q ss_pred             eeeeeccCceEEEEE----eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCC
Q psy9184         266 CKKIGEGVYGEVFKL----NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSD  319 (562)
Q Consensus       266 ~~~LG~GsfG~Vyka----~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h  319 (562)
                      ++.|+.|..+.||++    ..+++|+....          .....+.+|..+++.+..
T Consensus         2 i~~l~~G~~n~~~~v~~~~~~~vlK~~~~~----------~~~~~~~~e~~~~~~l~~   49 (239)
T PF01636_consen    2 IRPLSGGFSNRVYRVTTDDGRYVLKFYRPP----------DAAERLRREAAVLRQLAE   49 (239)
T ss_dssp             EEEEEESSSSEEEEEEETTSEEEEEEESSH----------HHHHHHHHHHHHHHHHHH
T ss_pred             CccCCCCCeeeEEEEEECCcEEEEEEeCCC----------CCHHHHHHHHHHHHHHHh
Confidence            578999999999999    58999986631          344577889999988876

; InterPro: IPR002575 This entry consists of bacterial antibiotic resistance proteins, which confer resistance to various aminoglycosides they include:- aminoglycoside 3'-phosphotransferase or kanamycin kinase / neomycin-kanamycin phosphotransferase and streptomycin 3''-kinase or streptomycin 3''-phosphotransferase. The aminoglycoside phosphotransferases inactivate aminoglycoside antibiotics via phosphorylation []. The proteins are found in a range of taxonomic groups.; PDB: 2PPQ_A 2Q83_B 3TDV_B 3TDW_A 3I0O_A 3I0Q_A 3I1A_B 3Q2M_A 3HAV_C 2PUI_B ....

>COG2112 Predicted Ser/Thr protein kinase [Signal transduction mechanisms]

Probab=97.87  E-value=2.6e-05  Score=74.66  Aligned_cols=127  Identities=21%  Similarity=0.245  Sum_probs=84.3

Q ss_pred             CCceeeeeeccCceEEEEE----eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCcccccccc
Q psy9184         262 ALKNCKKIGEGVYGEVFKL----NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTELLKC  337 (562)
Q Consensus       262 ~y~~~~~LG~GsfG~Vyka----~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~l~~~  337 (562)
                      .....+.||+|.+|.||+|    ..+|+|+-..+.          ....+..|+++|..+..                  
T Consensus        23 ~~~v~~~L~KG~~s~Vyl~~~~~~~~a~Kvrr~ds----------~r~~l~kEakiLeil~g------------------   74 (201)
T COG2112          23 ELRVEKELAKGTTSVVYLGEWRGGEVALKVRRRDS----------PRRNLEKEAKILEILAG------------------   74 (201)
T ss_pred             hhhhhhhhhcccccEEEEeeccCceEEEEEecCCc----------chhhHHHHHHHHHHhhh------------------
Confidence            3457789999999999998    689999877543          23567889999998886                  


Q ss_pred             cccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccccCCHHHHHHHHHHHHHHHHHHHhhCC
Q psy9184         338 SCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIKYRSPNQTYAMILQVVFSLAVAEVELE  417 (562)
Q Consensus       338 ~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~~l~e~~i~~I~~QIl~aL~yLH~~~~  417 (562)
                              ..+-                |..+.-+.-++.|||..|-.+.......+.+.    +..++++ +|.-+..|
T Consensus        75 --------~~~~----------------p~vy~yg~~~i~me~i~G~~L~~~~~~~~rk~----l~~vlE~-a~~LD~~G  125 (201)
T COG2112          75 --------EGVT----------------PEVYFYGEDFIRMEYIDGRPLGKLEIGGDRKH----LLRVLEK-AYKLDRLG  125 (201)
T ss_pred             --------cCCC----------------ceEEEechhhhhhhhhcCcchhhhhhcccHHH----HHHHHHH-HHHHHHhc
Confidence                    1111                22222334567799999765554433232333    3344555 44444479


Q ss_pred             eEeccCC-C-CCEEEccCCCCCcccccCCcccccccCCceEEEEeccceee
Q psy9184         418 FEHRDLH-M-SNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRC  466 (562)
Q Consensus       418 IiHRDLK-p-eNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~  466 (562)
                      |.|..|. | .||++...                     .+.|+||-.|+.
T Consensus       126 I~H~El~~~~k~vlv~~~---------------------~~~iIDFd~At~  155 (201)
T COG2112         126 IEHGELSRPWKNVLVNDR---------------------DVYIIDFDSATF  155 (201)
T ss_pred             cchhhhcCCceeEEecCC---------------------cEEEEEccchhh
Confidence            9999986 3 45666554                     599999998874

>KOG1235|consensus

Probab=97.76  E-value=8.6e-05  Score=82.51  Aligned_cols=85  Identities=18%  Similarity=0.255  Sum_probs=53.9

Q ss_pred             CCCCCCC--eEEEEEEecCCCCCcc--cccc--CCHHHHHHHHHHHHHHHHHHHhhCCeEeccCCCCCEEEccCCCCCcc
Q psy9184         366 PSMFEED--QIFIILELKNGGNDSG--DIKY--RSPNQTYAMILQVVFSLAVAEVELEFEHRDLHMSNILVLQTDQDESS  439 (562)
Q Consensus       366 p~~~~~~--~l~LVmE~~~gG~ll~--~l~~--l~e~~i~~I~~QIl~aL~yLH~~~~IiHRDLKpeNILl~~~~~~~~~  439 (562)
                      |..|.+-  .-.|+||||+|..+-+  .+..  ++...+..-+.+...-+  +=. .|++|.|=||.||++..++.    
T Consensus       267 P~Vy~~~st~RVLtME~~~G~~i~Dl~~i~~~gi~~~~i~~~l~~~~~~q--If~-~GffHaDPHPGNilv~~~~~----  339 (538)
T KOG1235|consen  267 PKVYWDLSTKRVLTMEYVDGIKINDLDAIDKRGISPHDILNKLVEAYLEQ--IFK-TGFFHADPHPGNILVRPNPE----  339 (538)
T ss_pred             CeehhhcCcceEEEEEecCCccCCCHHHHHHcCCCHHHHHHHHHHHHHHH--HHh-cCCccCCCCCCcEEEecCCC----
Confidence            4444333  6789999999875533  3322  55554443333322111  122 59999999999999997531    


Q ss_pred             cccCCcccccccCCceEEEEeccceeeecC
Q psy9184         440 FTLDDTHYAMKTAGVQVTIIDFTISRCFVG  469 (562)
Q Consensus       440 ~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~  469 (562)
                                  .+..+.+-|||+.+....
T Consensus       340 ------------~~~~ivllDhGl~~~is~  357 (538)
T KOG1235|consen  340 ------------GDEEIVLLDHGLYAVISH  357 (538)
T ss_pred             ------------CCccEEEEcccccccccH
Confidence                        123799999999887654

>COG1718 RIO1 Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms / Cell division and chromosome partitioning]

Probab=97.75  E-value=0.00054  Score=69.01  Aligned_cols=75  Identities=20%  Similarity=0.178  Sum_probs=55.5

Q ss_pred             CeEEEEEEecCCCC-Ccccccc--CCHHHHHHHHHHHHHHHHHHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccc
Q psy9184         372 DQIFIILELKNGGN-DSGDIKY--RSPNQTYAMILQVVFSLAVAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYA  448 (562)
Q Consensus       372 ~~l~LVmE~~~gG~-ll~~l~~--l~e~~i~~I~~QIl~aL~yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~  448 (562)
                      ..-.|||||+.... -.-.+.-  +...++..+..+++..+.-|-..+++||.||..=|||+..+               
T Consensus       139 ~~nVLvMEfIg~~g~pAP~LkDv~~e~~e~~~~~~~~v~~~~~l~~~a~LVHgDLSEyNiL~~~~---------------  203 (268)
T COG1718         139 RNNVLVMEFIGDDGLPAPRLKDVPLELEEAEGLYEDVVEYMRRLYKEAGLVHGDLSEYNILVHDG---------------  203 (268)
T ss_pred             cCCeEEEEeccCCCCCCCCcccCCcCchhHHHHHHHHHHHHHHHHHhcCcccccchhhheEEECC---------------
Confidence            35579999994321 1111211  33337888899999999888776799999999999999944               


Q ss_pred             cccCCceEEEEeccceeee
Q psy9184         449 MKTAGVQVTIIDFTISRCF  467 (562)
Q Consensus       449 ~~~~g~~vKL~DFGLSr~~  467 (562)
                            .+.|||||-|...
T Consensus       204 ------~p~iID~~QaV~~  216 (268)
T COG1718         204 ------EPYIIDVSQAVTI  216 (268)
T ss_pred             ------eEEEEECcccccc
Confidence                  6999999988654

>KOG3741|consensus

Probab=97.68  E-value=0.00025  Score=77.38  Aligned_cols=116  Identities=17%  Similarity=0.147  Sum_probs=88.2

Q ss_pred             eEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCcccccccccccCCCCCCCc
Q psy9184         275 GEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTELLKCSCVRGRYPDRL  348 (562)
Q Consensus       275 G~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~l~~~~iv~g~~~pnI  348 (562)
                      .+-|+|      ..|++|+++.......        .....=+++++++.|                          +|+
T Consensus       290 ~Ttyk~~s~~DG~~YvLkRlhg~r~~~~--------nk~t~lve~wkkl~h--------------------------~Nv  335 (655)
T KOG3741|consen  290 ITTYKATSNVDGNAYVLKRLHGDRDQST--------NKDTSLVEAWKKLCH--------------------------TNV  335 (655)
T ss_pred             ceeEeeeeccCCceeeeeeeccccccCc--------ccchHHHHHHHHhcc--------------------------Cce
Confidence            456777      7899999954432111        122334678889998                          999


Q ss_pred             eeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCC-ccccc------------------cCCHHHHHHHHHHHHHHH
Q psy9184         349 VTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGND-SGDIK------------------YRSPNQTYAMILQVVFSL  409 (562)
Q Consensus       349 v~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~l-l~~l~------------------~l~e~~i~~I~~QIl~aL  409 (562)
                      |.+.++|...         .|.+..+++|++|.++-.. ++.+-                  ..+|..+|.++.||..||
T Consensus       336 V~frevf~t~---------tF~D~SlvlvYDYyP~s~TL~d~~F~~~~~t~~~n~~~~~~~~~~~e~~lW~y~~QLtaaL  406 (655)
T KOG3741|consen  336 VPFREVFLTY---------TFGDLSLVLVYDYYPSSPTLYDLYFANPPFTKRTNSFYPSQNLKAPEEVLWSYISQLTAAL  406 (655)
T ss_pred             eehhhhhhhh---------ccCcceEEEEEecCCCCchHHHHHccCCccccccccccccCCCCchHHHHHHHHHHHHHHH
Confidence            9999999853         3567789999999886433 33220                  267899999999999999


Q ss_pred             HHHHhhCCeEeccCCCCCEEEccCC
Q psy9184         410 AVAEVELEFEHRDLHMSNILVLQTD  434 (562)
Q Consensus       410 ~yLH~~~~IiHRDLKpeNILl~~~~  434 (562)
                      .++|+ .|+.-+-|-|.+||+..+.
T Consensus       407 ~sIHs-sGLAck~L~~~kIlv~G~~  430 (655)
T KOG3741|consen  407 YSIHS-SGLACKTLDLKKILVTGKM  430 (655)
T ss_pred             HHHHh-cCceeecccHhHeEeeCcc
Confidence            99999 6999899999999999885

>cd05150 APH Aminoglycoside 3'-phosphotransferase (APH)

Probab=97.66  E-value=0.0003  Score=70.17  Aligned_cols=30  Identities=23%  Similarity=0.203  Sum_probs=25.5

Q ss_pred             CeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceee
Q psy9184         417 EFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRC  466 (562)
Q Consensus       417 ~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~  466 (562)
                      .++|+|+.|.|||++..+                    .+.|+||+.|..
T Consensus       164 ~l~HgD~~~~Nil~~~~~--------------------~~~iIDwe~a~~  193 (244)
T cd05150         164 VVTHGDACLPNIIVDPGK--------------------FSGFIDLGRLGV  193 (244)
T ss_pred             EEECCCCCCccEEEeCCc--------------------EEEEEEcccccc
Confidence            389999999999999864                    578999998754

The APH subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). APH catalyzes the transfer of the gamma-phosphoryl group from ATP to aminoglycoside antibiotics such as kanamycin, streptomycin, neomycin, and gentamicin, among others. The aminoglycoside antibiotics target the 30S ribosome and promote miscoding, leading to the production of defective proteins which insert into the bacterial membrane, resulting in membrane damage and the ultimate demise of the bacterium. Phosphorylation of the aminoglycoside antibiotics results in their inactivation, leading to bacterial antibiotic resistance. The APH gene is found on transposons and plasmids and is thought to have originated as a self-defense mechanism used by microorganisms that produce the antibio

>PF13095 FTA2: Kinetochore Sim4 complex subunit FTA2

Probab=97.65  E-value=0.0004  Score=68.17  Aligned_cols=135  Identities=16%  Similarity=0.096  Sum_probs=82.2

Q ss_pred             CCCceeeeeeccCc-eEEEEE----eeEEEEEeec---CCCCC----Ccchh------HHHHHHHHHHHHHHHhcCCccc
Q psy9184         261 SALKNCKKIGEGVY-GEVFKL----NNSVIKIMPI---EGDQS----VNGEE------QKKFREIFSEIMVTKETSDLQY  322 (562)
Q Consensus       261 ~~y~~~~~LG~Gsf-G~Vyka----~~vAIKii~~---~~~~~----~~~~~------~~~~~~il~Ei~ilk~L~h~~~  322 (562)
                      .+++.++.||.|+- |.||++    ..||||+...   .....    ..+..      ......+..|.+...+|+.+..
T Consensus        37 ~~I~flefLg~g~~~~~V~kv~I~g~~YALKlf~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~PF~~ECRAfgRLke~~~  116 (207)
T PF13095_consen   37 DDIEFLEFLGHGSHDGYVFKVEIDGRIYALKLFRFWDYTEPDYTRERFAGHETSLSTPAHYADPFNCECRAFGRLKEAGR  116 (207)
T ss_pred             CcEeeeeecCCCCceeEEEEEEECCeEEEEEEeeccccCCCccccccccccccccchhhhhcChHHHHHHhhHHHHhccc
Confidence            67889999999999 999999    9999999332   11100    00000      1234577888888888777332


Q ss_pred             cCCCCCCcccccccccccCCCCCCCc--eeehhhhhccc----c-CCCCCCCCCCCCeEEEEEEecCCCCCccccccCCH
Q psy9184         323 RTENSTPCFTELLKCSCVRGRYPDRL--VTLWEEFAKTK----K-SYNDHPSMFEEDQIFIILELKNGGNDSGDIKYRSP  395 (562)
Q Consensus       323 ~~~n~~p~fv~l~~~~iv~g~~~pnI--v~l~~~f~~~~----~-s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~~l~e  395 (562)
                                             ..+  ++.++++.-..    . .....-........-||.||.....      .+  
T Consensus       117 -----------------------e~~~Avkc~Gyl~L~~~~q~~~~~~~~~~~~~~~~~aIVKD~v~~~~------~~--  165 (207)
T PF13095_consen  117 -----------------------EGLWAVKCHGYLLLTEDQQFEQLRQRGSDHRPLPIRAIVKDFVPDDP------PL--  165 (207)
T ss_pred             -----------------------cCceEEEeeEEEEEchHHHHHHhhcccccCCCCccEEEEEeecCCcc------cc--
Confidence                                   223  44444432110    0 0000000011224578999887553      12  


Q ss_pred             HHHHHHHHHHHHHHHHHHhhCCeEeccCCCCCEE
Q psy9184         396 NQTYAMILQVVFSLAVAEVELEFEHRDLHMSNIL  429 (562)
Q Consensus       396 ~~i~~I~~QIl~aL~yLH~~~~IiHRDLKpeNIL  429 (562)
                        ...-+.+|++-|..+|. +||+=+|+|+.|..
T Consensus       166 --~~~~~~~~~~dl~~~~k-~gI~~~Dv~~~ny~  196 (207)
T PF13095_consen  166 --QIRDIPQMLRDLKILHK-LGIVPRDVKPRNYR  196 (207)
T ss_pred             --chhHHHHHHHHHHHHHH-CCeeeccCcccccc
Confidence              22345677778899999 89999999999985

>cd05155 APH_ChoK_like_1 Uncharacterized bacterial proteins with similarity to Aminoglycoside 3'-phosphotransferase (APH) and Choline kinase (ChoK) family members

Probab=97.63  E-value=0.00043  Score=68.94  Aligned_cols=43  Identities=9%  Similarity=0.135  Sum_probs=29.6

Q ss_pred             eeeeccCce-EEEEE-eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCC
Q psy9184         267 KKIGEGVYG-EVFKL-NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSD  319 (562)
Q Consensus       267 ~~LG~GsfG-~Vyka-~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h  319 (562)
                      ..|+.|+.. .||+. ..+++|+.+..          .....+.+|..++..|..
T Consensus         3 ~~~~~gG~~n~vy~~~~~~VlR~~~~~----------~~~~~~~~E~~~l~~L~~   47 (235)
T cd05155           3 EPVDSGGTDNATFRLGDDMSVRLPSAA----------GYAGQVRKEQRWLPRLAP   47 (235)
T ss_pred             eeccCCCcccceEEcCCceEEEcCCcc----------chHHHHHHHHHHHHHHhc
Confidence            567766666 59988 66788864432          112467899999998875

The APH/ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates, such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides, and macrolides leads to their inactivation and to bacterial antibiotic resista

>PLN02876 acyl-CoA dehydrogenase

Probab=97.61  E-value=0.00057  Score=80.59  Aligned_cols=47  Identities=17%  Similarity=0.217  Sum_probs=33.3

Q ss_pred             eeeeeeccCceEEEEE--------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcC
Q psy9184         265 NCKKIGEGVYGEVFKL--------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETS  318 (562)
Q Consensus       265 ~~~~LG~GsfG~Vyka--------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~  318 (562)
                      .+..|+.|.++.+|+.        ..+++|+.+...       .......+.+|+.+++.|.
T Consensus        42 ~v~~l~gG~sn~ty~l~~~~~~~~~~~VLR~~p~~~-------~~~~~~~~~rE~~~l~~L~   96 (822)
T PLN02876         42 KVSQFGHGQSNPTFLLEVGNGGSVKRYVLRKKPPGK-------LLQSAHAVEREYQVLRALG   96 (822)
T ss_pred             eEEEeCCCCcCceEEEEECCCCcceeEEEEeCCCCc-------cCccHHHHHHHHHHHHHHh
Confidence            3578899999999987        267888765432       0112246789999999996

>KOG2268|consensus

Probab=97.14  E-value=0.00069  Score=70.62  Aligned_cols=137  Identities=17%  Similarity=0.220  Sum_probs=88.6

Q ss_pred             CceeeeeeccCceEEEEE-----eeEEEEEeecCCCCCCcchhH--------------HHHHHHHHHHHHHHhcCCcccc
Q psy9184         263 LKNCKKIGEGVYGEVFKL-----NNSVIKIMPIEGDQSVNGEEQ--------------KKFREIFSEIMVTKETSDLQYR  323 (562)
Q Consensus       263 y~~~~~LG~GsfG~Vyka-----~~vAIKii~~~~~~~~~~~~~--------------~~~~~il~Ei~ilk~L~h~~~~  323 (562)
                      +.+++.||-|--+.||.+     .+.++|+-.....+..+....              -..-...+|+..|+.|..    
T Consensus        94 ~svGnqIGVGKESDIY~v~d~~G~~~~lK~HRLGRtSFR~Vk~kRDY~r~r~~~sWlyLSRlaa~kEfafmkaL~e----  169 (465)
T KOG2268|consen   94 ESVGNQIGVGKESDIYVVADEEGNPLILKLHRLGRTSFRNVKNKRDYLRKRKSGSWLYLSRLAATKEFAFMKALYE----  169 (465)
T ss_pred             hhhccccccccccceEEEecCCCCchhHHHHhhhhhhHHHhhhhhhhHhcCCccchhhhHHHHHHHHHHHHHHHHH----
Confidence            467799999999999999     788888766543221110000              011234456666666654    


Q ss_pred             CCCCCCcccccccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccccCCHHHHHHHHH
Q psy9184         324 TENSTPCFTELLKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIKYRSPNQTYAMIL  403 (562)
Q Consensus       324 ~~n~~p~fv~l~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~~l~e~~i~~I~~  403 (562)
                                                           ...+.|..+.-+..++|||++.|-++...-...+...+..-+.
T Consensus       170 -------------------------------------~gfpVPkpiD~~RH~Vvmelv~g~Pl~~v~~v~d~~~ly~~lm  212 (465)
T KOG2268|consen  170 -------------------------------------RGFPVPKPIDHNRHCVVMELVDGYPLRQVRHVEDPPTLYDDLM  212 (465)
T ss_pred             -------------------------------------cCCCCCCcccccceeeHHHhhcccceeeeeecCChHHHHHHHH
Confidence                                                 1122366666778999999999775544333344444444333


Q ss_pred             HHHHHHHHHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccce
Q psy9184         404 QVVFSLAVAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTIS  464 (562)
Q Consensus       404 QIl~aL~yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLS  464 (562)
                      .+   +--|-. +|+||+|..-=||+++.++                    .+++|||--.
T Consensus       213 ~~---Iv~la~-~GlIHgDFNEFNimv~dd~--------------------~i~vIDFPQm  249 (465)
T KOG2268|consen  213 GL---IVRLAN-HGLIHGDFNEFNIMVKDDD--------------------KIVVIDFPQM  249 (465)
T ss_pred             HH---HHHHHH-cCceecccchheeEEecCC--------------------CEEEeechHh
Confidence            33   333445 7999999999999999876                    6999999644

>PRK10593 hypothetical protein; Provisional

Probab=97.12  E-value=0.007  Score=62.87  Aligned_cols=47  Identities=15%  Similarity=0.066  Sum_probs=34.3

Q ss_pred             CceeeeeeccCceEEEEE----eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCC
Q psy9184         263 LKNCKKIGEGVYGEVFKL----NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSD  319 (562)
Q Consensus       263 y~~~~~LG~GsfG~Vyka----~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h  319 (562)
                      ....+.||.|..+.||..    ..+++|..+...          ....+..|...|+.|..
T Consensus        16 ~~~~~~i~~G~~~~vy~~~~~~~~~~~k~~~~~~----------~~~~~~~Ea~~L~~L~~   66 (297)
T PRK10593         16 LSRVECISEQPYAALWALYDSQGNPMPLMARSFS----------TPGVAQQEAWKLSMLAR   66 (297)
T ss_pred             hheeeecCCccceeEEEEEcCCCCEEEEEecccc----------cchHHHHHHHHHHHHcc
Confidence            345688999999999997    457778754311          11467889999999875

>cd05153 HomoserineK_II Homoserine Kinase, type II

Probab=97.06  E-value=0.0021  Score=65.90  Aligned_cols=46  Identities=11%  Similarity=0.151  Sum_probs=33.5

Q ss_pred             CceeeeeeccCceEEEEE----eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCC
Q psy9184         263 LKNCKKIGEGVYGEVFKL----NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSD  319 (562)
Q Consensus       263 y~~~~~LG~GsfG~Vyka----~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h  319 (562)
                      ...++.|..|.-..+|+.    ..+++|+.....           ...+..|+.++..|.+
T Consensus        16 ~~~i~~i~~G~~n~~y~v~~~~~~~vLr~~~~~~-----------~~~~~~e~~~l~~L~~   65 (296)
T cd05153          16 LLSFEGISAGIENTNYFVTTDSGRYVLTLFEKVS-----------AEELPFFLALLDHLAE   65 (296)
T ss_pred             hhheecccCccccceEEEEeCCCcEEEEEcCCCC-----------hHhccHHHHHHHHHHH
Confidence            344678888888899988    678999876311           1356778888888865

Homoserine kinase is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of unusual homoserine kinases, from a subset of bacteria, which have a PK fold. These proteins do not bear any similarity to the GHMP family homoserine kinases present in most bacteria and eukaryotes. Homoserine kinase catalyzes the transfer of the gamma-phosphoryl group from ATP to L-homoserine producing L-homoserine phosphate, an intermediate in the production of the amino acids threonine, methionine, and isoleucine.

>PF12260 PIP49_C: Protein-kinase domain of FAM69; InterPro: IPR022049 Family with sequence similarity 69 has three members (A, B and C)

Probab=96.93  E-value=0.0034  Score=60.93  Aligned_cols=98  Identities=15%  Similarity=0.080  Sum_probs=76.7

Q ss_pred             HHHHHHHHhcCCccccCCCCCCcccccccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCc
Q psy9184         308 FSEIMVTKETSDLQYRTENSTPCFTELLKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDS  387 (562)
Q Consensus       308 l~Ei~ilk~L~h~~~~~~n~~p~fv~l~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll  387 (562)
                      ..|..+++.+.+                         .+++.++++++                 .-++|.||...+++.
T Consensus         7 ~~E~lll~~l~~-------------------------~~~~pk~lG~C-----------------G~~~v~E~~~~~~~~   44 (188)
T PF12260_consen    7 NNEPLLLQLLQG-------------------------SEPFPKLLGSC-----------------GRFYVVEYVGAGSLY   44 (188)
T ss_pred             ccHHHHHHHcCC-------------------------CCCCCCeeeEC-----------------CCEEEEEeecCcccc
Confidence            358888999887                         25677777666                 336788999876553


Q ss_pred             ------cccccCCHHHHHHHHHHHHHHHHHHHhhC--CeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEE
Q psy9184         388 ------GDIKYRSPNQTYAMILQVVFSLAVAEVEL--EFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTII  459 (562)
Q Consensus       388 ------~~l~~l~e~~i~~I~~QIl~aL~yLH~~~--~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~  459 (562)
                            ..+...+|..+..|+.|++..+.+++...  .+.-.|++|+|+-++.++                    ++|++
T Consensus        45 ~~~~~l~~~~~~~w~~R~~iA~~lL~~l~~l~~~~~~~~~lcDv~~~nfgv~~~~--------------------~lk~i  104 (188)
T PF12260_consen   45 GIYRPLSQFLQSPWEQRAKIALQLLELLEELDHGPLGFFYLCDVSPDNFGVNDDG--------------------RLKLI  104 (188)
T ss_pred             ccccccccccccCHHHHHHHHHHHHHHHHHHhcCCCCcEEEeecchHHeEEeCCC--------------------cEEEE
Confidence                  34445789999999999999999998711  277799999999999886                    79999


Q ss_pred             eccceeee
Q psy9184         460 DFTISRCF  467 (562)
Q Consensus       460 DFGLSr~~  467 (562)
                      |...+...
T Consensus       105 Dld~v~~~  112 (188)
T PF12260_consen  105 DLDDVFVE  112 (188)
T ss_pred             echhcchh
Confidence            99876544

Proteins in this uncharacterised family are described as transmembrane proteins.

>TIGR02721 ycfN_thiK thiamine kinase

Probab=96.80  E-value=0.0044  Score=62.48  Aligned_cols=31  Identities=23%  Similarity=0.258  Sum_probs=26.0

Q ss_pred             CeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeec
Q psy9184         417 EFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFV  468 (562)
Q Consensus       417 ~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~  468 (562)
                      .++|+|+.|.|||++.++                     +.|+||..|....
T Consensus       147 ~l~H~Dl~~~Nil~~~~~---------------------~~lIDwE~a~~gd  177 (256)
T TIGR02721       147 APLHMDVHAYNLVVTPQG---------------------LKLIDWEYASDGD  177 (256)
T ss_pred             eeecCCCCcCcEEEeCCC---------------------CEEEeccccCcCC
Confidence            489999999999998763                     6899999886543

Members of this family are the ycfN gene product of Escherichia coli, now identified as the salvage enzyme thiamine kinase (thiK), and additional proteobacterial homologs taken to be orthologs with equivalent function.

>KOG1266|consensus

Probab=96.77  E-value=0.00095  Score=69.32  Aligned_cols=80  Identities=16%  Similarity=0.199  Sum_probs=66.8

Q ss_pred             CCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCcccccc-------CCHHHHHHHHHHHHHHHHHHHhhCC-
Q psy9184         346 DRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIKY-------RSPNQTYAMILQVVFSLAVAEVELE-  417 (562)
Q Consensus       346 pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~~-------l~e~~i~~I~~QIl~aL~yLH~~~~-  417 (562)
                      .||++++.+|.+.+..        ......++.||+..|.+-..++.       +....-..|+.||+.||.|||+ +. 
T Consensus       127 snlvkfH~yw~d~K~~--------e~~rviFiteymssgs~~~fLkrt~~~~~a~~~~~wkkw~tqIlsal~yLhs-~~P  197 (458)
T KOG1266|consen  127 SNLVKFHKYWTDKKYE--------EKPRVIFITEYMSSGSLKQFLKRTKKNQKALFQKAWKKWCTQILSALSYLHS-CDP  197 (458)
T ss_pred             HHHHHHHHhhcccccc--------cccceEEEEecccchhHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhhhhhhc-cCC
Confidence            8899999999875521        23467889999999977666643       6777888999999999999999 76 


Q ss_pred             -eEeccCCCCCEEEccCC
Q psy9184         418 -FEHRDLHMSNILVLQTD  434 (562)
Q Consensus       418 -IiHRDLKpeNILl~~~~  434 (562)
                       |+|..+...-|++..++
T Consensus       198 piihgnlTc~tifiq~ng  215 (458)
T KOG1266|consen  198 PIIHGNLTCDTIFIQHNG  215 (458)
T ss_pred             ccccCCcchhheeecCCc
Confidence             99999999999999776

>KOG0606|consensus

Probab=96.70  E-value=0.00026  Score=82.48  Aligned_cols=63  Identities=22%  Similarity=0.254  Sum_probs=54.9

Q ss_pred             CCeEEEEEEecCCCCCcccccc---CCHHHHHHHHHHHHHHHHHHHhhCCeEeccCCCCCEEEccCC
Q psy9184         371 EDQIFIILELKNGGNDSGDIKY---RSPNQTYAMILQVVFSLAVAEVELEFEHRDLHMSNILVLQTD  434 (562)
Q Consensus       371 ~~~l~LVmE~~~gG~ll~~l~~---l~e~~i~~I~~QIl~aL~yLH~~~~IiHRDLKpeNILl~~~~  434 (562)
                      ...++|+|+|..||.+...+..   .+.+-++..+..+..+++|||. ..+.|||++|.|+|+...+
T Consensus       876 rsP~~L~~~~~~~~~~~Skl~~~~~~saepaRs~i~~~vqs~e~L~s-~~r~h~~~~p~~~l~~~~g  941 (1205)
T KOG0606|consen  876 RSPLPLVGHYLNGGDLPSKLHNSGCLSAEPARSPILERVQSLESLHS-SLRKHRDLKPDSLLIAYDG  941 (1205)
T ss_pred             CCCcchhhHHhccCCchhhhhcCCCcccccccchhHHHHhhhhcccc-chhhcccccccchhhcccC
Confidence            4578999999999888777654   6677788889999999999999 5799999999999999887

>TIGR00938 thrB_alt homoserine kinase, Neisseria type

Probab=96.65  E-value=0.016  Score=60.12  Aligned_cols=47  Identities=21%  Similarity=0.212  Sum_probs=31.9

Q ss_pred             CceeeeeeccCceEEEEE----eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCC
Q psy9184         263 LKNCKKIGEGVYGEVFKL----NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSD  319 (562)
Q Consensus       263 y~~~~~LG~GsfG~Vyka----~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h  319 (562)
                      ...++.++.|.-..||++    ..+++|+.....          ....+..|+.++..|..
T Consensus        24 ~~~i~~~~~G~~n~~y~v~t~~~~~vLK~~~~~~----------~~~~i~~e~~~l~~L~~   74 (307)
T TIGR00938        24 LLSLKGIAEGVENSNYLLTTDVGRYILTLYEKRV----------KAEELPFFLALTTHLAA   74 (307)
T ss_pred             ceeccccCCccccceEEEEeCCCcEEEEEecCCC----------CHHHHHHHHHHHHHHHH
Confidence            445677888888899988    578889875421          11345567788877754

Homoserine kinase is required in the biosynthesis of threonine from aspartate.The member of this family from Pseudomonas aeruginosa was shown by direct assay and complementation to act specifically as a homoserine kinase.

>PF10707 YrbL-PhoP_reg: PhoP regulatory network protein YrbL; InterPro: IPR019647 This entry represents proteins that are activated by the protein PhoP

Probab=96.64  E-value=0.034  Score=54.58  Aligned_cols=131  Identities=18%  Similarity=0.161  Sum_probs=84.8

Q ss_pred             eeeeeccCceEEEEE---eeEEEEEeecCCCCCCc--------chhHHHHHHHHHHHHHHHhcC-CccccCCCCCCcccc
Q psy9184         266 CKKIGEGVYGEVFKL---NNSVIKIMPIEGDQSVN--------GEEQKKFREIFSEIMVTKETS-DLQYRTENSTPCFTE  333 (562)
Q Consensus       266 ~~~LG~GsfG~Vyka---~~vAIKii~~~~~~~~~--------~~~~~~~~~il~Ei~ilk~L~-h~~~~~~n~~p~fv~  333 (562)
                      ...||.|+.=.||.-   ....||++.........        -.......+..+|+.....+. .              
T Consensus         6 ~~~i~~G~~R~cy~HP~dp~~cIKV~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~E~~~y~~l~~~--------------   71 (199)
T PF10707_consen    6 SDLIAQGGERDCYQHPDDPNLCIKVMRPDRGERRRPFKRWLKRLRPKSRYRQNRRELRYYKQLSLR--------------   71 (199)
T ss_pred             CcccccCCCceEEECCCCCCeEEEEEccccccccccchhHHHhhcccchhHHHHHHHHHHHHHhhc--------------
Confidence            468999999999998   78899998865400000        001123466778887777766 3              


Q ss_pred             cccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCC--CCCccccc------cCCHHHHHHHHHHH
Q psy9184         334 LLKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNG--GNDSGDIK------YRSPNQTYAMILQV  405 (562)
Q Consensus       334 l~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~g--G~ll~~l~------~l~e~~i~~I~~QI  405 (562)
                             .+..+.+|.++|+..++             +..+-+|+|....  |.....+.      .+++ .   +...+
T Consensus        72 -------~~~~~~~i~r~~G~veT-------------~~G~Glv~e~I~d~dG~~s~TL~~~l~~~~~~~-~---~~~~L  127 (199)
T PF10707_consen   72 -------RGVDWSHIPRFYGFVET-------------NLGLGLVVELIRDADGNISPTLEDYLKEGGLTE-E---LRQAL  127 (199)
T ss_pred             -------cCCcccccccEeEEEec-------------CCceEEEEEEEECCCCCcCccHHHHHHcCCccH-H---HHHHH
Confidence                   22234889999988876             5577888888743  32222221      1333 2   33333


Q ss_pred             HHHHHHHHhhCCeEeccCCCCCEEEccCCC
Q psy9184         406 VFSLAVAEVELEFEHRDLHMSNILVLQTDQ  435 (562)
Q Consensus       406 l~aL~yLH~~~~IiHRDLKpeNILl~~~~~  435 (562)
                      -.-..||-+ .+|+.+||+|.||++...+.
T Consensus       128 ~~f~~~l~~-~~Iv~~dl~~~NIv~~~~~~  156 (199)
T PF10707_consen  128 DEFKRYLLD-HHIVIRDLNPHNIVVQRRDS  156 (199)
T ss_pred             HHHHHHHHH-cCCeecCCCcccEEEEecCC
Confidence            344567777 79999999999999998764

PhoP controls the expression of a large number of genes that mediate adaptation to low Mg2+ environments and/or virulence in several bacterial species. YbrL is proposed to be acting in a loop activity with PhoP and PrmA analogous to the multi-component loop in Salmonella sp., where the PhoP-dependent PmrD protein activates the regulatory protein PmrA, and the activated PmrA then represses transcription from the PmrD promoter which harbours binding sites for both the PhoP and PmrA proteins. Expression of YrbL is induced in low Mg2+ in a PhoP-dependent fashion and repressed by Fe3+ in a PmrA-dependent manner [].

>KOG2270|consensus

Probab=96.60  E-value=0.03  Score=59.68  Aligned_cols=140  Identities=17%  Similarity=0.082  Sum_probs=95.0

Q ss_pred             eeeeeeccCceEEEEE-----eeEEEEEeecCCCCC------C-----------cchhHHHH-HHHHHHHHHHHhcCCcc
Q psy9184         265 NCKKIGEGVYGEVFKL-----NNSVIKIMPIEGDQS------V-----------NGEEQKKF-REIFSEIMVTKETSDLQ  321 (562)
Q Consensus       265 ~~~~LG~GsfG~Vyka-----~~vAIKii~~~~~~~------~-----------~~~~~~~~-~~il~Ei~ilk~L~h~~  321 (562)
                      +-.+|..|--+-||.|     ..+|||+.+.+-...      +           ...+.+.+ -....|++-|++|+...
T Consensus       148 inGCiSTGKEANVYHat~~dG~~~AIKIYKTSILvFKDRdRYV~GEfRFRhgyck~NPRKMVk~WAEKE~RNLkRl~~aG  227 (520)
T KOG2270|consen  148 INGCISTGKEANVYHATEEDGSEFAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKHNPRKMVKTWAEKEMRNLKRLNNAG  227 (520)
T ss_pred             cccccccCccceeEeeecCCCceEEEEEEeeeEEEEechhhhccceeeeecccccCCcHHHHHHHHHHHHHHHHHHHhcC
Confidence            3467888999999999     779999987541100      0           01112222 23356777788887611


Q ss_pred             ccCCCCCCcccccccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCcc--ccc--cCCHHH
Q psy9184         322 YRTENSTPCFTELLKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSG--DIK--YRSPNQ  397 (562)
Q Consensus       322 ~~~~n~~p~fv~l~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~--~l~--~l~e~~  397 (562)
                      -                     .+|--+                    .-....|||+++. ++-.-  .++  .++...
T Consensus       228 I---------------------P~PePI--------------------lLk~hVLVM~FlG-rdgw~aPkLKd~~ls~~k  265 (520)
T KOG2270|consen  228 I---------------------PCPEPI--------------------LLKNHVLVMEFLG-RDGWAAPKLKDASLSTSK  265 (520)
T ss_pred             C---------------------CCCCce--------------------eeecceEeeeecc-CCCCcCcccccccCChHH
Confidence            1                     012111                    1124579999994 32222  222  277788


Q ss_pred             HHHHHHHHHHHHHHHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeee
Q psy9184         398 TYAMILQVVFSLAVAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCF  467 (562)
Q Consensus       398 i~~I~~QIl~aL~yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~  467 (562)
                      +..+-.|++.-+..|-..|+.||-||.-=|+|+...                     .+.|||-+-|...
T Consensus       266 a~~~Y~~~v~~MR~lY~~c~LVHADLSEfN~LyhdG---------------------~lyiIDVSQSVE~  314 (520)
T KOG2270|consen  266 ARELYQQCVRIMRRLYQKCRLVHADLSEFNLLYHDG---------------------KLYIIDVSQSVEH  314 (520)
T ss_pred             HHHHHHHHHHHHHHHHHHhceeccchhhhhheEECC---------------------EEEEEEccccccC
Confidence            999999999999999888999999999999999877                     6999999987644

>cd05157 ETNK_euk Ethanolamine kinase (ETNK) in eukaryotes

Probab=96.55  E-value=0.012  Score=58.12  Aligned_cols=31  Identities=29%  Similarity=0.440  Sum_probs=25.8

Q ss_pred             CeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceee
Q psy9184         417 EFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRC  466 (562)
Q Consensus       417 ~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~  466 (562)
                      .++|+|+++.|||++..+.                   .+.|+||-.|..
T Consensus       171 ~l~H~Dl~~~Nil~~~~~~-------------------~~~lIDwe~a~~  201 (235)
T cd05157         171 VFCHNDLLSGNIIYNEEKN-------------------SVKFIDYEYAGY  201 (235)
T ss_pred             EEEcCCCCcCcEEEeCCCC-------------------CEEEEEcccCCc
Confidence            5899999999999997321                   699999988764

ETNK is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major phospholipid, phosphatidylethanolamine (PtdEtn). Unlike ChoK, ETNK shows specific activity for its substrate, and displays negligible activity towards N-methylated derivatives of Etn. The Drosophila ETNK is implicated in development and neuronal function. Mammals contain two ETNK proteins, ETNK1 and ETNK2. ETNK1 selectively increases Etn uptake and phosphorylation, as well as PtdEtn synthesis. ETNK2 is found primarily in the liver and reproductive tissues. It plays a critical role in regulating placental hemostasis to support late embryo

>PRK05231 homoserine kinase; Provisional

Probab=96.55  E-value=0.028  Score=58.34  Aligned_cols=31  Identities=26%  Similarity=0.228  Sum_probs=25.8

Q ss_pred             CeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeee
Q psy9184         417 EFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCF  467 (562)
Q Consensus       417 ~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~  467 (562)
                      ++||+|++|.|||++.+.                    ..-|+||+.+...
T Consensus       188 ~liHgD~~~~Nil~~~~~--------------------~~~iIDf~~~~~~  218 (319)
T PRK05231        188 GVIHADLFRDNVLFEGDR--------------------LSGFIDFYFACND  218 (319)
T ss_pred             ccCCCCCCCCcEEEECCc--------------------eEEEEecccccCC
Confidence            799999999999998553                    4579999988653

>PRK09550 mtnK methylthioribose kinase; Reviewed

Probab=96.49  E-value=0.019  Score=62.18  Aligned_cols=53  Identities=19%  Similarity=0.229  Sum_probs=34.5

Q ss_pred             eeeeeeccCceEEEEE------eeEEEEEeecCCCCCCcchh-HHHHHHHHHHHHHHHhcCC
Q psy9184         265 NCKKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEE-QKKFREIFSEIMVTKETSD  319 (562)
Q Consensus       265 ~~~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~-~~~~~~il~Ei~ilk~L~h  319 (562)
                      ..+.||.|.+..||++      +.++||.-.... .. .+.. ....++...|...|+.+..
T Consensus        30 ~~~elggGn~N~VyrV~~~~g~~svIVKqa~p~~-r~-~g~~wpl~~eR~~~Eae~L~~l~~   89 (401)
T PRK09550         30 TAREIGDGNLNLVFRVSDTEGGKSVIVKQALPYV-RV-VGESWPLTLDRARIEAEALKIQAK   89 (401)
T ss_pred             eeeEcCCCceEEEEEEEeCCCCeEEEEEecCccc-cc-ccccccccHHHHHHHHHHHHHHHh
Confidence            4578999999999999      279999854211 00 0111 1234566778888888654

>KOG0576|consensus

Probab=95.86  E-value=0.0048  Score=69.12  Aligned_cols=149  Identities=17%  Similarity=0.096  Sum_probs=100.6

Q ss_pred             CCCceeeeeeccCceEEEEEeeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCccccccccccc
Q psy9184         261 SALKNCKKIGEGVYGEVFKLNNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTELLKCSCV  340 (562)
Q Consensus       261 ~~y~~~~~LG~GsfG~Vyka~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~l~~~~iv  340 (562)
                      .-+...+-+++|+++.+++.++.|=|.+.-.-      ..+.  ....-++++|.+++|                     
T Consensus       242 kws~~fh~fvK~altknpKkRptaeklL~h~f------vs~~--l~~rl~~eLLdK~n~---------------------  292 (829)
T KOG0576|consen  242 KWSEFFHNFVKGALTKNPKKRPTAEKLLQHPF------VSQT--LSRRLAIELLDKVNN---------------------  292 (829)
T ss_pred             cchHHHHHHHHHHhcCCCccCCChhhheecee------eccc--hhhHHHHHHHHHccC---------------------
Confidence            34556688999999999999444444433111      0011  234568899999999                     


Q ss_pred             CCCCCCC-ceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc-----cCCHHHHHHHHHHHHHHHHHHHh
Q psy9184         341 RGRYPDR-LVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK-----YRSPNQTYAMILQVVFSLAVAEV  414 (562)
Q Consensus       341 ~g~~~pn-Iv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~-----~l~e~~i~~I~~QIl~aL~yLH~  414 (562)
                           || .+..++.++             .++..+++|+++.+|.......     .+.+-+...+.+.-+.+|+++|+
T Consensus       293 -----P~~~v~~~~d~~-------------~E~~~~i~~~i~s~~rs~~~~~~~se~~~~~~~~~~~~r~et~~l~~l~~  354 (829)
T KOG0576|consen  293 -----PNPVVRYLEDYD-------------GEDYLWIPMRICSTGRSSALEMTVSEIALEQYQFAYPLRKETRPLAELHS  354 (829)
T ss_pred             -----CCCcccccccCC-------------cccccchhhhhhcCCccccccCChhhHhhhhhhhhhhhhhhccccccccc
Confidence                 77 555555554             3668999999998883322222     14455667778888899999999


Q ss_pred             hCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecC----CcEEEeecCCCcc
Q psy9184         415 ELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVG----EKICYYDLSQDEE  482 (562)
Q Consensus       415 ~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~----~g~v~~~l~~~pe  482 (562)
                       ..=+|||    |||....                     ..+..|||....+..    .....++.+++|+
T Consensus       355 -~~~~~~d----~~l~s~~---------------------~~~~~~~~v~~~L~~~~~~~t~~~~~~~~~pe  400 (829)
T KOG0576|consen  355 -SYKVHRD----NILGSEE---------------------EVKLLDFAVPPQLTRTMKPRTAIGTPEPLAPE  400 (829)
T ss_pred             -ccccCcc----ccccccc---------------------ccccccccCCcccCcccccccCCCCCCCCCch
Confidence             4568998    8888876                     478899988776654    2334455666666

>cd05152 MPH2' Macrolide 2'-Phosphotransferase (MPH2')

Probab=95.53  E-value=0.16  Score=52.22  Aligned_cols=32  Identities=28%  Similarity=0.397  Sum_probs=25.6

Q ss_pred             CeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeee
Q psy9184         417 EFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCF  467 (562)
Q Consensus       417 ~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~  467 (562)
                      .++|+|++|.|||++.++.                   ..-|+||+.+...
T Consensus       186 ~lvHGD~~~~Nilv~~~~~-------------------~~gviDWe~a~iG  217 (276)
T cd05152         186 VLVHGDLHPGHILIDEDAR-------------------VTGLIDWTEAKVG  217 (276)
T ss_pred             eeEeCCCCCCcEEEeCCCC-------------------EEEEECcHhcccC
Confidence            3899999999999987431                   4579999988653

MPH2' is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). MPH2' catalyzes the transfer of the gamma-phosphoryl group from ATP to the 2'-hydroxyl of macrolide antibiotics such as erythromycin, clarithromycin, and azithromycin, among others. Macrolides penetrate the bacterial cell and bind to ribosomes, where it interrupts protein elongation, leading ultimately to the demise of the bacterium. Phosphorylation of macrolides leads to their inactivation. Based on substrate specificity and amino acid sequence, MPH2' is divided into types I and II, encoded by mphA and mphB genes, respectively. MPH2'I inactivates 14-membered ring macrolides while MPH2'II inactivates both 14- and 16-membered ring macrolides. Enzymatic inactivation of macrolides has been reported

>KOG1236|consensus

Probab=95.03  E-value=0.044  Score=59.07  Aligned_cols=62  Identities=18%  Similarity=0.177  Sum_probs=38.6

Q ss_pred             eEEEEEEecCCCCCcccccc--CCHHHHHHHHHHHHHHHHHHHhhCCeEeccCCCCCEEEccCC
Q psy9184         373 QIFIILELKNGGNDSGDIKY--RSPNQTYAMILQVVFSLAVAEVELEFEHRDLHMSNILVLQTD  434 (562)
Q Consensus       373 ~l~LVmE~~~gG~ll~~l~~--l~e~~i~~I~~QIl~aL~yLH~~~~IiHRDLKpeNILl~~~~  434 (562)
                      ...++-+|..|-.....+..  .++.....+..--+.||--+----+++|-|++|.||++....
T Consensus       319 ~~vl~E~~~~Gl~v~~~v~~~~~pe~l~kkva~lg~~AllkMl~vDNFvHaDlHPGNVlirf~~  382 (565)
T KOG1236|consen  319 DLVLVETYERGLSVLRFVKWKSQPEALVKKVAKLGVNALLKMLIVDNFVHADLHPGNVLIRFNK  382 (565)
T ss_pred             cceeeeeccccccHHhhhhcccChHHHHHHHHHHHHHHHHHHHHhhcceecccCCCcEEEEecC
Confidence            44556567765444433332  555455555555555554333324899999999999998764

>TIGR01767 MTRK 5-methylthioribose kinase

Probab=94.07  E-value=0.16  Score=54.40  Aligned_cols=51  Identities=14%  Similarity=0.115  Sum_probs=31.6

Q ss_pred             eeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCC
Q psy9184         268 KIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSD  319 (562)
Q Consensus       268 ~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h  319 (562)
                      .||.|.-..||++      +.++||.-..-... +...-+...++..-|..+|+....
T Consensus         2 EigdGnlN~VfrV~~~~g~~svIVKQAlp~vRv-~g~~wpl~~~R~~~E~~~L~~~~~   58 (370)
T TIGR01767         2 EVGDGNLNLVFHVYDQEGDRAAIVKQALPYVRV-VGESWPLTLDRARIESSALIRQGE   58 (370)
T ss_pred             cCCCCceEEEEEEEcCCCCeeEEEEEcCHHHhh-cCCCCCCCccHHHHHHHHHHHhhc
Confidence            5799999999999      37999975421100 000112334556678888877655

This enzyme is involved in the methionine salvage pathway in certain bacteria.

>PHA03111 Ser/Thr kinase; Provisional

Probab=93.96  E-value=0.058  Score=56.68  Aligned_cols=93  Identities=24%  Similarity=0.333  Sum_probs=57.7

Q ss_pred             CCeEEEEEEecCCCCCcccccc--------CC-HHHHHHHHHHHHHHHHHHHh---hCCeEeccCCCCCEEEccCCCCCc
Q psy9184         371 EDQIFIILELKNGGNDSGDIKY--------RS-PNQTYAMILQVVFSLAVAEV---ELEFEHRDLHMSNILVLQTDQDES  438 (562)
Q Consensus       371 ~~~l~LVmE~~~gG~ll~~l~~--------l~-e~~i~~I~~QIl~aL~yLH~---~~~IiHRDLKpeNILl~~~~~~~~  438 (562)
                      +..-.||+.+..+  ..+.+..        .+ .+-++.++.||+.-.-.+-+   ..+++|-||||+|||+-+.. ..+
T Consensus       247 drGnIIIfPLArc--Sadkv~~~~~~e~GF~s~~~YikfifLQiaLLyikIYelp~c~nF~H~DLKPdNILiFds~-~~i  323 (444)
T PHA03111        247 DRGNIIIFPLARC--SADKVTEENAAELGFKSLVEYIKFIFLQIALLYIKIYELPCCDNFLHVDLKPDNILIFDSD-EPI  323 (444)
T ss_pred             cCCcEEEEehhhc--ccccCCHHHHHHcCCccHHHHHHHHHHHHHHHHHhhhcCCCcceeeeccCCCCcEEEecCC-CcE
Confidence            4466788888753  3333321        22 45678888898765433322   13599999999999998874 334


Q ss_pred             ccccCCcccccccCCceEEEEeccceeee
Q psy9184         439 SFTLDDTHYAMKTAGVQVTIIDFTISRCF  467 (562)
Q Consensus       439 ~~~~~~~~~~~~~~g~~vKL~DFGLSr~~  467 (562)
                      ..++.+..+-... .+.++|.||.+|+..
T Consensus       324 ~I~~~~~~~vF~E-pi~~~LnDFDfSqv~  351 (444)
T PHA03111        324 SITLKDATYVFNE-PIKACLNDFDFSQVA  351 (444)
T ss_pred             EEEECCeEEEecc-chhhhhcccCHHHHc
Confidence            4444443332222 346788888888754

>TIGR02904 spore_ysxE spore coat protein YsxE

Probab=93.87  E-value=0.23  Score=51.66  Aligned_cols=30  Identities=23%  Similarity=0.262  Sum_probs=26.1

Q ss_pred             CeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceee
Q psy9184         417 EFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRC  466 (562)
Q Consensus       417 ~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~  466 (562)
                      +++|+|+.+.|+|++.++                    .+.|+||..+..
T Consensus       197 ~lcHgD~~~~Nvl~~~~~--------------------~~~iIDfd~~~~  226 (309)
T TIGR02904       197 VLVHGKLSLSHFLYDETR--------------------GGYFINFEKASF  226 (309)
T ss_pred             eeeCCCCcHHhEEEcCCC--------------------CEEEEEhhhccc
Confidence            699999999999998876                    588999987754

Members of this family are homologs of the Bacillus subtilis spore coat protein CotS. Members of this family, designated YsxE, are found only in the family Bacillaceae, from among the endospore-forming members of the Firmicutes branch of the Bacteria. As a rule, the ysxE gene is found immediately downstream of spoVID, a gene necessary for spore coat assembly. The protein has been shown to be part of the spore coat.

>PTZ00384 choline kinase; Provisional

Probab=93.71  E-value=0.37  Score=52.04  Aligned_cols=30  Identities=33%  Similarity=0.554  Sum_probs=24.5

Q ss_pred             CCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceee
Q psy9184         416 LEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRC  466 (562)
Q Consensus       416 ~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~  466 (562)
                      ..++|.|+.+.|||...+                     .+.++||-.|..
T Consensus       227 ~VfCHNDL~~gNIL~~~~---------------------~l~lID~EYA~~  256 (383)
T PTZ00384        227 VLFCHNDLFFTNILDFNQ---------------------GIYFIDFDFAGF  256 (383)
T ss_pred             eeeeeccCCcccEEecCC---------------------CEEEEEeccccC
Confidence            357999999999997654                     599999987653

>PF05445 Pox_ser-thr_kin: Poxvirus serine/threonine protein kinase; InterPro: IPR008790 This family of proteins contain poxvirus serine/threonine protein kinases, which are essential for phosphorylation of virion proteins during virion assembly

Probab=93.17  E-value=0.076  Score=56.10  Aligned_cols=93  Identities=18%  Similarity=0.301  Sum_probs=56.1

Q ss_pred             CCeEEEEEEecCCCCCcccccc---------CCHHHHHHHHHHHHHHHHHH---HhhCCeEeccCCCCCEEEccCCCCCc
Q psy9184         371 EDQIFIILELKNGGNDSGDIKY---------RSPNQTYAMILQVVFSLAVA---EVELEFEHRDLHMSNILVLQTDQDES  438 (562)
Q Consensus       371 ~~~l~LVmE~~~gG~ll~~l~~---------l~e~~i~~I~~QIl~aL~yL---H~~~~IiHRDLKpeNILl~~~~~~~~  438 (562)
                      +..-.||+.+..+  ..+.+..         -..+-++.++.||+.-.--+   -...+++|-||||+|||+-+... .+
T Consensus       243 ~rGnIIIfPLA~~--Sadkv~~~~~~e~GF~s~~~YvkfifLQiaLLyikIYelp~c~nF~H~DLKPdNILiFds~~-~i  319 (434)
T PF05445_consen  243 DRGNIIIFPLARC--SADKVTESNAAELGFKSNVEYVKFIFLQIALLYIKIYELPCCTNFLHVDLKPDNILIFDSKE-PI  319 (434)
T ss_pred             ccCcEEEEehhhc--chhhcCHHHHHhcCchhHHHHHHHHHHHHHHHHeeeecCCCcceeeecccCcCcEEEecCCC-ce
Confidence            3345688888753  3333321         12456777888875443112   22235999999999999988743 34


Q ss_pred             ccccCCcccccccCCceEEEEeccceeee
Q psy9184         439 SFTLDDTHYAMKTAGVQVTIIDFTISRCF  467 (562)
Q Consensus       439 ~~~~~~~~~~~~~~g~~vKL~DFGLSr~~  467 (562)
                      ..++.+..+.... .+.++|.||.+|+..
T Consensus       320 ~I~~~~~~~vF~E-pi~~~LnDFDfSqv~  347 (434)
T PF05445_consen  320 RIKFGNRNYVFKE-PIRCCLNDFDFSQVA  347 (434)
T ss_pred             EEEECCeEEEecc-cceeeecccCHHHhc
Confidence            4444443333222 346789999988764

; GO: 0004672 protein kinase activity, 0005524 ATP binding

>PLN02756 S-methyl-5-thioribose kinase

Probab=92.95  E-value=0.76  Score=50.06  Aligned_cols=54  Identities=17%  Similarity=0.099  Sum_probs=32.6

Q ss_pred             eeeeeeccCceEEEEE----eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCC
Q psy9184         265 NCKKIGEGVYGEVFKL----NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSD  319 (562)
Q Consensus       265 ~~~~LG~GsfG~Vyka----~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h  319 (562)
                      ..+.||.|.-..||+.    ..++||.-....... ...-+....+...|...|+.+..
T Consensus        36 ~~~eiggGn~N~VyrV~~~~~svVVKqa~p~~r~v-ga~wpl~~~R~~~Ea~aL~~~~~   93 (418)
T PLN02756         36 KIKEVGDGNLNFVYIVVSSSGSFVIKQALPYIRCI-GESWPMTKERAYFEATALREHGR   93 (418)
T ss_pred             eEEEcCCCceeeEEEEEcCCccEEEEeCCccccCC-CccccCCccHHHHHHHHHHHhhh
Confidence            4688999999999999    579999866321100 00000122344566777776653

>cd05156 ChoK_euk Choline Kinase (ChoK) in eukaryotes

Probab=92.00  E-value=0.26  Score=50.71  Aligned_cols=31  Identities=35%  Similarity=0.633  Sum_probs=26.3

Q ss_pred             CCeEeccCCCCCEEEccC----CCCCcccccCCcccccccCCceEEEEeccceee
Q psy9184         416 LEFEHRDLHMSNILVLQT----DQDESSFTLDDTHYAMKTAGVQVTIIDFTISRC  466 (562)
Q Consensus       416 ~~IiHRDLKpeNILl~~~----~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~  466 (562)
                      ..++|.|++|.|||++.+    +                    .+.++||..|..
T Consensus       179 ~~lcH~Dl~~~Nil~~~~~~~~~--------------------~i~lIDwEya~~  213 (302)
T cd05156         179 VVFCHNDLQEGNILLLNPSSETK--------------------KLVLIDFEYASY  213 (302)
T ss_pred             ceEEecCCCcCeEEecCCCCCCC--------------------cEEEEeeCCCCC
Confidence            358999999999999874    3                    689999998764

The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC) and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. ChoK plays an important role in cell signaling pathways and the regulation of cell growth. Along with PCho, it is involved in malignant transformation through Ras oncogenes in various human cancer

>TIGR02906 spore_CotS spore coat protein, CotS family

Probab=91.45  E-value=0.38  Score=49.50  Aligned_cols=30  Identities=33%  Similarity=0.501  Sum_probs=25.5

Q ss_pred             CCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceee
Q psy9184         416 LEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRC  466 (562)
Q Consensus       416 ~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~  466 (562)
                      .+++|+|+++.|||++.+                     .+.|+||+.+..
T Consensus       187 ~~liHgD~~~~Nil~~~~---------------------~i~lIDfd~~~~  216 (313)
T TIGR02906       187 RGFCHQDYAYHNILLKDN---------------------EVYVIDFDYCTI  216 (313)
T ss_pred             CceEcCCCCcccEEEeCC---------------------cEEEEECccccc
Confidence            479999999999999873                     578999997654

Members of this family include the spore coat proteins CotS and YtaA from Bacillus subtilis and, from other endospore-forming bacteria, homologs that are more closely related to these two than to the spore coat proteins YutH and YsxE. The CotS family is more broadly distributed than YutH or YsxE, but still is not universal among spore-formers.

>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase

Probab=90.32  E-value=0.33  Score=56.18  Aligned_cols=102  Identities=10%  Similarity=-0.061  Sum_probs=58.2

Q ss_pred             eEEEEeccceeeecC-------CcEEEeecCCCccccCCC-CCcHHHHHHHhhcccCCCCCCCCCCChhhhHHHHHHHHh
Q psy9184         455 QVTIIDFTISRCFVG-------EKICYYDLSQDEELFEGE-GDYQFDMYRMMRKQCQNNWQNFTPKNNVFWIHYLVDKAT  526 (562)
Q Consensus       455 ~vKL~DFGLSr~~~~-------~g~v~~~l~~~pelF~g~-~~~q~dIy~lm~~~~~~~W~~~~P~tn~~wl~yl~~~Ll  526 (562)
                      .+++.|||.++....       ..++++..|++||++.+. .+...|||++.-. +.+...+..|+........+ ...+
T Consensus       516 ~~~~~~~~~~~~~~~g~~~~~~~~~vGT~~Y~APE~l~~~~~~~~~DiwSlG~i-l~ElltG~~pf~~~~~~~~~-~~il  593 (669)
T cd05610         516 VKIGTPYRTPKSVRRGAAPVEGERILGTPDYLAPELLLGKPHGPAVDWWALGVC-LFEFLTGIPPFNDETPQQVF-QNIL  593 (669)
T ss_pred             ccccccCCCchhhhcccccccCCceeeCccccCHHHcCCCCCCcHHHHHHHHHH-HHHHHHCCCCCCCCCHHHHH-HHHH
Confidence            467788888766432       346789999999988774 5666999886433 33344556666433222222 2233


Q ss_pred             hcccCCCCCCCchhHHHHHHHHHHHhcCCCcCcCC
Q psy9184         527 CLKKGYQYLRAPRHQAFELLEELGQNALHFDSCYE  561 (562)
Q Consensus       527 ~~~~~~~~~~~~~~~~~~~l~~l~~~~l~~~s~~~  561 (562)
                      .....++....   ..-..+..+.+.||.++.+.|
T Consensus       594 ~~~~~~p~~~~---~~~~~~~~~l~~lL~~dP~~R  625 (669)
T cd05610         594 NRDIPWPEGEE---KLSVNAQNAIEILLTMDPTKR  625 (669)
T ss_pred             hcCCCCCcccc---cCCHHHHHHHHHHcccChhHC
Confidence            21222222211   123345667777888776655

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481

>PF01633 Choline_kinase: Choline/ethanolamine kinase; InterPro: IPR002573 Choline kinase, (ATP:choline phosphotransferase, 2

Probab=89.38  E-value=0.34  Score=47.28  Aligned_cols=31  Identities=35%  Similarity=0.530  Sum_probs=20.0

Q ss_pred             CeEeccCCCCCEEE-ccCCCCCcccccCCcccccccCCceEEEEeccceeee
Q psy9184         417 EFEHRDLHMSNILV-LQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCF  467 (562)
Q Consensus       417 ~IiHRDLKpeNILl-~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~  467 (562)
                      -++|.||.|.|||+ ..++                    .+++|||..|..-
T Consensus       144 v~cHnDl~~~Nil~~~~~~--------------------~~~lIDfEya~~n  175 (211)
T PF01633_consen  144 VFCHNDLNPGNILINNKDG--------------------EVKLIDFEYAGYN  175 (211)
T ss_dssp             EEE-S--SGGGEEETSSSS--------------------CEEE--GTT-EEE
T ss_pred             eEeeccCccccEEeccCCC--------------------eEEEecHHHHhhc
Confidence            48999999999999 4443                    7999999988754

7.1.32 from EC) belongs to the choline/ethanolamine kinase family. Ethanolamine and choline are major membrane phospholipids, in the form of glycerophosphoethanolamine and glycerophosphocholine. Ethanolamine is also a component of the glycosylphosphatidylinositol (GPI) anchor, which is necessary for cell-surface protein attachment []. The de novo synthesis of these phospholipids begins with the creation of phosphoethanolamine and phosphocholine by ethanolamine and choline kinases in the first step of the CDP-ethanolamine pathway [, ]. There are two putative choline/ethanolamine kinases (C/EKs) in the Trypanosoma brucei genome. Ethanolamine kinase has no choline kinase activity [] and its activity is inhibited by ADP []. Inositol supplementation represses ethanolamine kinase, decreasing the incorporation of ethanolamine into the CDP-ethanolamine pathway and into phosphatidylethanolamine and phosphatidylcholine []. ; GO: 0016773 phosphotransferase activity, alcohol group as acceptor; PDB: 3C5I_A 2IG7_A 3LQ3_A 3FEG_A 2QG7_E 3FI8_A 1NW1_A 3MES_A 3G15_A 2CKP_B ....

>COG4248 Uncharacterized protein with protein kinase and helix-hairpin-helix DNA-binding domains [General function prediction only]

Probab=89.32  E-value=2.4  Score=46.28  Aligned_cols=60  Identities=12%  Similarity=0.025  Sum_probs=48.1

Q ss_pred             EEEEEEecCCCCCcccc----------ccCCHHHHHHHHHHHHHHHHHHHhhCCeEeccCCCCCEEEccCC
Q psy9184         374 IFIILELKNGGNDSGDI----------KYRSPNQTYAMILQVVFSLAVAEVELEFEHRDLHMSNILVLQTD  434 (562)
Q Consensus       374 l~LVmE~~~gG~ll~~l----------~~l~e~~i~~I~~QIl~aL~yLH~~~~IiHRDLKpeNILl~~~~  434 (562)
                      +-+.|..+.|-.-...+          ...+|+.+..+.+.|+.|.+-||+ .|-+-+|+.++|+|+.+++
T Consensus        85 iGflmP~v~g~~pI~~~y~p~tRRqs~P~~~w~fllrvaRnlA~aFA~lH~-~Gh~vGDVn~~~~lVsd~~  154 (637)
T COG4248          85 IGFLMPKVSGKEPIHMIYSPATRRQSYPHCAWDFLLRVARNLASAFATLHE-HGHVVGDVNQNSFLVSDDS  154 (637)
T ss_pred             eEEecccCCCccchhhhcCchhhcccCCccccHHHHHHHHHHHHHHHHHHh-cCCcccccCccceeeecCc
Confidence            55677777654332222          126789999999999999999999 7999999999999999987

>PRK10271 thiK thiamine kinase; Provisional

Probab=89.27  E-value=0.3  Score=47.52  Aligned_cols=30  Identities=20%  Similarity=0.227  Sum_probs=25.3

Q ss_pred             eEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeec
Q psy9184         418 FEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFV  468 (562)
Q Consensus       418 IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~  468 (562)
                      .+|+|++|+||++..++                     ++|+||+.|....
T Consensus        79 p~H~D~~~~N~~~~~~~---------------------~~lIDwe~a~~gD  108 (188)
T PRK10271         79 PLHMDVHAGNLVHSASG---------------------LRLIDWEYAGDGD  108 (188)
T ss_pred             eecCCCCCccEEEECCC---------------------EEEEeCCcccCCC
Confidence            69999999999998763                     8899999886543

>PLN02236 choline kinase

Probab=88.43  E-value=0.58  Score=49.65  Aligned_cols=33  Identities=30%  Similarity=0.555  Sum_probs=27.2

Q ss_pred             CCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeee
Q psy9184         416 LEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCF  467 (562)
Q Consensus       416 ~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~  467 (562)
                      ..++|+|+++.|||++..+.                   .+.|+||..|...
T Consensus       200 ~~~cH~Dl~~~Nil~~~~~~-------------------~~~lID~Eya~~~  232 (344)
T PLN02236        200 IGFCHNDLQYGNIMIDEETR-------------------AITIIDYEYASYN  232 (344)
T ss_pred             ceEEeCCCCcCcEEEeCCCC-------------------cEEEEeehhcccc
Confidence            35899999999999986532                   6999999988754

>smart00587 CHK ZnF_C4 abd HLH domain containing kinases domain

Probab=85.87  E-value=0.7  Score=44.84  Aligned_cols=35  Identities=31%  Similarity=0.531  Sum_probs=26.8

Q ss_pred             CeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceee
Q psy9184         417 EFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRC  466 (562)
Q Consensus       417 ~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~  466 (562)
                      .++|+|+.+.||++..++...+               ..+.|+||..++.
T Consensus       121 vl~HgD~~~~N~~~~~~~~~~~---------------~~~~liDfq~~~~  155 (196)
T smart00587      121 VLNHGDLWANNIMFKYDDEGKP---------------EDVALIDFQLSHY  155 (196)
T ss_pred             EEeeCCCCccceeeccCCCCCc---------------cceEEEecccCCc
Confidence            5899999999999986542110               1589999998875

subfamily of choline kinases

>COG2334 Putative homoserine kinase type II (protein kinase fold) [General function prediction only]

Probab=85.81  E-value=1  Score=47.66  Aligned_cols=30  Identities=30%  Similarity=0.377  Sum_probs=25.7

Q ss_pred             eEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceee
Q psy9184         418 FEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRC  466 (562)
Q Consensus       418 IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~  466 (562)
                      +||.|++|.|||++..+.                   .+.++|||-+..
T Consensus       199 iIH~D~~~~NVl~d~~~~-------------------~~g~iDFdDa~~  228 (331)
T COG2334         199 IIHGDLHPDNVLFDDDTD-------------------VSGFIDFDDAGY  228 (331)
T ss_pred             eeecCCCccceeEcCCCC-------------------eeeEEEcccccc
Confidence            999999999999999852                   378999997753

>COG0510 ycfN Thiamine kinase and related kinases [Coenzyme transport and metabolism]

Probab=83.76  E-value=1.5  Score=45.04  Aligned_cols=51  Identities=18%  Similarity=0.174  Sum_probs=37.8

Q ss_pred             HHHHHHHHHHHHHHHHHhh-CCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeee
Q psy9184         397 QTYAMILQVVFSLAVAEVE-LEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCF  467 (562)
Q Consensus       397 ~i~~I~~QIl~aL~yLH~~-~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~  467 (562)
                      .....+..+-.++.-.+.. +-++|.|+.|+|+|.+..+                    .+.|+||-.|..-
T Consensus       133 ~~~~~~~~l~~~l~~~~~~~~v~cH~Dl~~~N~l~t~~~--------------------~l~LIDWEyAg~~  184 (269)
T COG0510         133 LLRKKLKELRRALEEVPKDDLVPCHNDLNPGNLLLTDKG--------------------GLFLIDWEYAGLN  184 (269)
T ss_pred             HHHHHHHHHHHHhhhcCCCceeeecCCCCccceEEcCCC--------------------cEEEEecccCCCc
Confidence            3444555566666666653 3489999999999999965                    6999999887653

>PRK11768 serine/threonine protein kinase; Provisional

Probab=82.88  E-value=1.2  Score=46.95  Aligned_cols=29  Identities=31%  Similarity=0.281  Sum_probs=23.8

Q ss_pred             CCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceee
Q psy9184         416 LEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRC  466 (562)
Q Consensus       416 ~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~  466 (562)
                      .++||+|++++|||++ ++                     +.|+||+-+..
T Consensus       196 ~~liHgD~h~~NvL~~-d~---------------------~~iIDFDd~~~  224 (325)
T PRK11768        196 LLRLHGDCHPGNILWR-DG---------------------PHFVDLDDARM  224 (325)
T ss_pred             ccceecCCCchhcccc-CC---------------------cEEEeCCCCCC
Confidence            4689999999999994 32                     67899998764

>KOG2137|consensus

Probab=81.69  E-value=0.9  Score=51.86  Aligned_cols=46  Identities=17%  Similarity=0.190  Sum_probs=38.8

Q ss_pred             HHHHHHHHHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecC
Q psy9184         404 QVVFSLAVAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVG  469 (562)
Q Consensus       404 QIl~aL~yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~  469 (562)
                      +++.||.|+|...++||+.|.|++|.++..+                    ..||+-|+++....+
T Consensus       107 ~v~dgl~flh~sAk~VH~ni~p~~i~~na~~--------------------~wkl~Gf~f~v~~~~  152 (700)
T KOG2137|consen  107 NVADGLAFLHRSAKVVHGNIQPEAIVVNANG--------------------DWKLAGFSFCVNANG  152 (700)
T ss_pred             cccchhhhhccCcceeecccchhheeeccCc--------------------ceeeccchhhhccCC
Confidence            4449999999977899999999999999997                    588888887765544

>PLN02421 phosphotransferase, alcohol group as acceptor/kinase

Probab=80.93  E-value=1.8  Score=45.53  Aligned_cols=32  Identities=25%  Similarity=0.457  Sum_probs=26.4

Q ss_pred             eEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeec
Q psy9184         418 FEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFV  468 (562)
Q Consensus       418 IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~  468 (562)
                      ++|.|+.+.|||++.++.                   .++++||..|..-.
T Consensus       184 ~CHnDl~~~NiL~~~~~~-------------------~l~lID~EYag~nd  215 (330)
T PLN02421        184 FAHNDLLSGNLMLNEDEG-------------------KLYFIDFEYGSYSY  215 (330)
T ss_pred             EEECCCCcccEEEeCCCC-------------------cEEEEcccccCCCc
Confidence            799999999999986532                   69999999886543

>COG3173 Predicted aminoglycoside phosphotransferase [General function prediction only]

Probab=80.14  E-value=1.5  Score=46.22  Aligned_cols=33  Identities=12%  Similarity=0.191  Sum_probs=28.9

Q ss_pred             CeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecC
Q psy9184         417 EFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVG  469 (562)
Q Consensus       417 ~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~  469 (562)
                      .++|+|+++.|||++..+                    -+-++||+++..-.+
T Consensus       199 ~lvHGD~~~gNlii~~~~--------------------~~gVlDwe~~~lGDP  231 (321)
T COG3173         199 VLVHGDYRPGNLIIDPGR--------------------PTGVLDWELATLGDP  231 (321)
T ss_pred             eeeeCCcccCCEEEeCCC--------------------eeEEEeccccccCCc
Confidence            489999999999999987                    488999999987655

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	562
2wb8_A	352	Crystal Structure Of Haspin Kinase Length = 352		2e-62
3dlz_A	357	Crystal Structure Of Human Haspin In Complex With A		4e-62
2vuw_A	336	Structure Of Human Haspin Kinase Domain Length = 33		3e-61

>pdb|2WB8|A Chain A, Crystal Structure Of Haspin Kinase Length = 352

Iteration: 1
 Score =  236 bits (603), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 124/291 (42%), Positives = 174/291 (59%), Gaps = 6/291 (2%)
Query: 240 KKILDICQQEDVVSFEDRYPSSALKNCKKIGEGVYGEVFKL----NNSVIKIMPIEGDQS 295
           +K+   C Q+  V F    P+  L+ C+KIGEGV+GEVF+         IKI+ IEG   
Sbjct: 15  EKVYGECSQKGPVPFSHCLPTEKLQRCEKIGEGVFGEVFQTIADHTPVAIKIIAIEGPDL 74
Query: 296 VNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTELLKCSCVRGRYPDRLVTLWEEF 355
           VNG  QK F EI  EI+++KE S L     N T  F  L    CV+G YP  L+  W+ +
Sbjct: 75  VNGSHQKTFEEILPEIIISKELSLLSGEVCNRTEGFIGLNSVHCVQGSYPPLLLKAWDHY 134
Query: 356 AKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDI--KYRSPNQTYAMILQVVFSLAVAE 413
             TK S ND P  F++DQ+FI+LE + GG D   +  K  S     +++ Q+  SLAVAE
Sbjct: 135 NSTKGSANDRPDFFKDDQLFIVLEFEFGGIDLEQMRTKLSSLATAKSILHQLTASLAVAE 194
Query: 414 VELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVGEKIC 473
             L FEHRDLH  N+L+ +T   +  +TL+     + + G+QV+IID+T+SR      + 
Sbjct: 195 ASLRFEHRDLHWGNVLLKKTSLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLERDGIVV 254
Query: 474 YYDLSQDEELFEGEGDYQFDMYRMMRKQCQNNWQNFTPKNNVFWIHYLVDK 524
           + D+S DE+LF G+GDYQFD+YR+M+K+  N W  + P +NV W+HYL DK
Sbjct: 255 FCDVSMDEDLFTGDGDYQFDIYRLMKKENNNRWGEYHPYSNVLWLHYLTDK 305

>pdb|3DLZ|A Chain A, Crystal Structure Of Human Haspin In Complex With Amp Length = 357

Iteration: 1
 Score =  236 bits (601), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 123/285 (43%), Positives = 171/285 (60%), Gaps = 6/285 (2%)
Query: 246 CQQEDVVSFEDRYPSSALKNCKKIGEGVYGEVFKL----NNSVIKIMPIEGDQSVNGEEQ 301
           C Q+  V F    P+  L+ C+KIGEGV+GEVF+         IKI+ IEG   VNG  Q
Sbjct: 26  CSQKGPVPFSHCLPTEKLQRCEKIGEGVFGEVFQTIADHTPVAIKIIAIEGPDLVNGSHQ 85
Query: 302 KKFREIFSEIMVTKETSDLQYRTENSTPCFTELLKCSCVRGRYPDRLVTLWEEFAKTKKS 361
           K F EI  EI+++KE S L     N T  F  L    CV+G YP  L+  W+ +  TK S
Sbjct: 86  KTFEEILPEIIISKELSLLSGEVCNRTEGFIGLNSVHCVQGSYPPLLLKAWDHYNSTKGS 145
Query: 362 YNDHPSMFEEDQIFIILELKNGGNDSGDI--KYRSPNQTYAMILQVVFSLAVAEVELEFE 419
            ND P  F++DQ+FI+LE + GG D   +  K  S     +++ Q+  SLAVAE  L FE
Sbjct: 146 ANDRPDFFKDDQLFIVLEFEFGGIDLEQMRTKLSSLATAKSILHQLTASLAVAEASLRFE 205
Query: 420 HRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVGEKICYYDLSQ 479
           HRDLH  N+L+ +T   +  +TL+     + + G+QV+IID+T+SR      + + D+S 
Sbjct: 206 HRDLHWGNVLLKKTSLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLERDGIVVFCDVSM 265
Query: 480 DEELFEGEGDYQFDMYRMMRKQCQNNWQNFTPKNNVFWIHYLVDK 524
           DE+LF G+GDYQFD+YR+M+K+  N W  + P +NV W+HYL DK
Sbjct: 266 DEDLFTGDGDYQFDIYRLMKKENNNRWGEYHPYSNVLWLHYLTDK 310

>pdb|2VUW|A Chain A, Structure Of Human Haspin Kinase Domain Length = 336

Iteration: 1
 Score =  233 bits (593), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 122/285 (42%), Positives = 169/285 (59%), Gaps = 6/285 (2%)
Query: 246 CQQEDVVSFEDRYPSSALKNCKKIGEGVYGEVFKL----NNSVIKIMPIEGDQSVNGEEQ 301
           C Q+  V F    P+  L+ C+KIGEGV+GEVF+         IKI+ IEG   VNG  Q
Sbjct: 5   CSQKGPVPFSHCLPTEKLQRCEKIGEGVFGEVFQTIADHTPVAIKIIAIEGPDLVNGSHQ 64
Query: 302 KKFREIFSEIMVTKETSDLQYRTENSTPCFTELLKCSCVRGRYPDRLVTLWEEFAKTKKS 361
           K F EI  EI+++KE S L     N T  F  L    CV+G YP  L+  W+ +  TK S
Sbjct: 65  KTFEEILPEIIISKELSLLSGEVCNRTEGFIGLNSVHCVQGSYPPLLLKAWDHYNSTKGS 124
Query: 362 YNDHPSMFEEDQIFIILELKNGGND--SGDIKYRSPNQTYAMILQVVFSLAVAEVELEFE 419
            ND P  F++DQ+FI+LE + GG D      K  S     +++ Q+  SLAVAE  L FE
Sbjct: 125 ANDRPDFFKDDQLFIVLEFEFGGIDLEQXRTKLSSLATAKSILHQLTASLAVAEASLRFE 184
Query: 420 HRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVGEKICYYDLSQ 479
           HRDLH  N+L+ +T   +  +TL+     + + G+QV+IID+T+SR      + + D+S 
Sbjct: 185 HRDLHWGNVLLKKTSLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLERDGIVVFCDVSX 244
Query: 480 DEELFEGEGDYQFDMYRMMRKQCQNNWQNFTPKNNVFWIHYLVDK 524
           DE+LF G+GDYQFD+YR+ +K+  N W  + P +NV W+HYL DK
Sbjct: 245 DEDLFTGDGDYQFDIYRLXKKENNNRWGEYHPYSNVLWLHYLTDK 289

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	562
2vuw_A	336	Serine/threonine-protein kinase haspin; cell cycle	8e-89
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	3e-12
3fxz_A	297	Serine/threonine-protein kinase PAK 1; transferase	1e-05
2c30_A	321	Serine/threonine-protein kinase PAK 6; CRIB domain	1e-05
2x7f_A	326	TRAF2 and NCK-interacting protein kinase; serine/t	6e-05
2dyl_A	318	Dual specificity mitogen-activated protein kinase	9e-05
1u5q_A	348	Serine/threonine protein kinase TAO2; transferase;	2e-04
2j7t_A	302	Serine/threonine-protein kinase 10; transferase, A	9e-04

>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A Length = 336

 Score =  276 bits (707), Expect = 8e-89
 Identities = 128/327 (39%), Positives = 184/327 (56%), Gaps = 7/327 (2%)

Query: 243 LDICQQEDVVSFEDRYPSSALKNCKKIGEGVYGEVFKLNN----SVIKIMPIEGDQSVNG 298
           +  C Q+  V F    P+  L+ C+KIGEGV+GEVF+         IKI+ IEG   VNG
Sbjct: 2   MGECSQKGPVPFSHCLPTEKLQRCEKIGEGVFGEVFQTIADHTPVAIKIIAIEGPDLVNG 61

Query: 299 EEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTELLKCSCVRGRYPDRLVTLWEEFAKT 358
             QK F EI  EI+++KE S L     N T  F  L    CV+G YP  L+  W+ +  T
Sbjct: 62  SHQKTFEEILPEIIISKELSLLSGEVCNRTEGFIGLNSVHCVQGSYPPLLLKAWDHYNST 121

Query: 359 KKSYNDHPSMFEEDQIFIILELKNGGND--SGDIKYRSPNQTYAMILQVVFSLAVAEVEL 416
           K S ND P  F++DQ+FI+LE + GG D      K  S     +++ Q+  SLAVAE  L
Sbjct: 122 KGSANDRPDFFKDDQLFIVLEFEFGGIDLEQMRTKLSSLATAKSILHQLTASLAVAEASL 181

Query: 417 EFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVGEKICYYD 476
            FEHRDLH  N+L+ +T   +  +TL+     + + G+QV+IID+T+SR      + + D
Sbjct: 182 RFEHRDLHWGNVLLKKTSLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLERDGIVVFCD 241

Query: 477 LSQDEELFEGEGDYQFDMYRMMRKQCQNNWQNFTPKNNVFWIHYLVDKATCLKKGYQYLR 536
           +S DE+LF G+GDYQFD+YR+M+K+  N W  + P +NV W+HYL DK            
Sbjct: 242 VSMDEDLFTGDGDYQFDIYRLMKKENNNRWGEYHPYSNVLWLHYLTDKMLKQMTFKTKCN 301

Query: 537 APRHQAFE-LLEELGQNALHFDSCYEM 562
            P  +  +  ++E  +  L+F S  ++
Sbjct: 302 TPAMKQIKRKIQEFHRTMLNFSSATDL 328

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 68.7 bits (167), Expect = 3e-12
 Identities = 80/615 (13%), Positives = 171/615 (27%), Gaps = 174/615 (28%)

Query: 20  LDDTVIEDNGNKTALNKCE-------SNEEDEMYY----------SQTEDSVIEAHKKSV 62
            D   ++D   K+ L+K E        +                    +  V E  + + 
Sbjct: 33  FDCKDVQDM-PKSILSKEEIDHIIMSKDAVSGTLRLFWTLLSKQEEMVQKFVEEVLRINY 91

Query: 63  RFLDETLKKEKTDNKAEKNNNSVGTVKSVGIHRDLKDAEEGQGDAVAQFNRLRNVTVRRG 122
           +FL   +K E+                    + + +D         A++N  R     + 
Sbjct: 92  KFLMSPIKTEQRQPSMMTRM-----------YIEQRDRLYNDNQVFAKYNVSRLQPYLKL 140

Query: 123 RKFIAEDADTTLQPNKVSLASGRFTMEDVDTTLHRTKVSLAPGKMWKRSLINNSIREQHK 182
           R+ + E     L+P K  L  G   +             L  GK W   +  +     +K
Sbjct: 141 RQALLE-----LRPAKNVLIDG---V-------------LGSGKTW---VALDVCLS-YK 175

Query: 183 VSHKF-CRSF-VSYSEEFSSA------VSFKSRRSSSLSSTGDEDTLYETVLSSSLQYDD 234
           V  K   + F ++     S             +   + +S  D  +  +  + S      
Sbjct: 176 VQCKMDFKIFWLNLKNCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELR 235

Query: 235 NEFCRKK------ILD-ICQQEDVVSFEDRYPSSALKNCKKI----GEGVYGEVFKLNNS 283
                K       +L  +   +   +F           CK +     + V      L+ +
Sbjct: 236 RLLKSKPYENCLLVLLNVQNAKAWNAFNLS--------CKILLTTRFKQV---TDFLSAA 284

Query: 284 VIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTELLKCSCVRGR 343
               + ++           + + +  +  +     DL      + P      + S +   
Sbjct: 285 TTTHISLD--HHSMTLTPDEVKSLLLKY-LDCRPQDLPREVLTTNP-----RRLSIIAES 336

Query: 344 YPDRLVTLWEEFAKT---------KKSYN-----DHPSMFEEDQIFIILELKNGGNDSGD 389
             D L T W+ +            + S N     ++  MF+   +F           S  
Sbjct: 337 IRDGLAT-WDNWKHVNCDKLTTIIESSLNVLEPAEYRKMFDRLSVF---------PPSAH 386

Query: 390 IKYRSPNQTYAMILQVVFSLAVAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAM 449
           I    P       L +++   +    +   +    +    +++    ES+ ++   +  +
Sbjct: 387 I----PTIL----LSLIWFDVIKSDVMVVVN---KLHKYSLVEKQPKESTISIPSIYLEL 435

Query: 450 KT-----AGVQVTIID-FTISRCFVGEKICYYDLSQDEELFEGEGD---YQFDMYRMMRK 500
           K        +  +I+D + I + F        DL           D   Y    + +   
Sbjct: 436 KVKLENEYALHRSIVDHYNIPKTF-----DSDDLIPPYL------DQYFYSHIGHHLKNI 484

Query: 501 QCQNNWQNFTPKNNVF----WI--------------HYLVDKATCLKKGYQYLRAPRHQA 542
           +       F     VF    ++                +++    LK    Y+       
Sbjct: 485 EHPERMTLFR---MVFLDFRFLEQKIRHDSTAWNASGSILNTLQQLKFYKPYIC-DNDPK 540

Query: 543 FE-LLEELGQNALHF 556
           +E L+  +    L F
Sbjct: 541 YERLVNAI----LDF 551

>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A* Length = 297

 Score = 46.5 bits (111), Expect = 1e-05
 Identities = 20/74 (27%), Positives = 31/74 (41%), Gaps = 16/74 (21%)

Query: 249 EDVVSFEDRYPSSALKNCKKIGEGVYGEVFK-----LNNSV-IKIMPIEGDQSVNGEEQK 302
             +VS  D  P       +KIG+G  G V+          V I+ M +        ++Q 
Sbjct: 10  RSIVSVGD--PKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNL--------QQQP 59

Query: 303 KFREIFSEIMVTKE 316
           K   I +EI+V +E
Sbjct: 60  KKELIINEILVMRE 73

>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A* Length = 321

 Score = 46.6 bits (111), Expect = 1e-05
 Identities = 17/74 (22%), Positives = 31/74 (41%), Gaps = 16/74 (21%)

Query: 249 EDVVSFEDRYPSSALKNCKKIGEGVYGEVFKLNNSV------IKIMPIEGDQSVNGEEQK 302
             VV   D  P   L +  KIGEG  G V             +K+M +         +Q+
Sbjct: 35  RMVVDQGD--PRLLLDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDL--------RKQQ 84

Query: 303 KFREIFSEIMVTKE 316
           +   +F+E+++ ++
Sbjct: 85  RRELLFNEVVIMRD 98

>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens} Length = 326

 Score = 44.3 bits (105), Expect = 6e-05
 Identities = 20/82 (24%), Positives = 35/82 (42%), Gaps = 17/82 (20%)

Query: 247 QQEDVVSFEDRYPSSALKNCKKIGEGVYGEVFK-----LNNSV-IKIMPIEGDQSVNGEE 300
            + D+ +  D  P+   +  + +G G YG+V+K           IK+M + GD       
Sbjct: 12  DEIDLSALRD--PAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGD------- 62

Query: 301 QKKFREIFSEIMVTKETSDLQY 322
             +  EI  EI + K+ S  + 
Sbjct: 63  --EEEEIKQEINMLKKYSHHRN 82

>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens} Length = 318

 Score = 43.5 bits (103), Expect = 9e-05
 Identities = 33/198 (16%), Positives = 62/198 (31%), Gaps = 60/198 (30%)

Query: 242 ILDICQQEDVVSFEDRYPSSALKNCKKIGEGVYGEVFKLNN------SVIKIMPIEGDQS 295
            L I  Q       D      L+N  ++G G  G+V+K+          +K M   G++ 
Sbjct: 12  YLTIGGQRYQAEIND------LENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKE 65

Query: 296 VNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTELLKCSCVRGRYPDRLVTLWEEF 355
                  + + I  ++ V  ++ D  Y                    +            
Sbjct: 66  -------ENKRILMDLDVVLKSHDCPYIV------------------QC----------- 89

Query: 356 AKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIKYRSP---NQTYAMILQVVFSLAVA 412
                      +      +FI +EL     +    + + P        M + +V +L   
Sbjct: 90  ---------FGTFITNTDVFIAMELMGTCAEKLKKRMQGPIPERILGKMTVAIVKALYYL 140

Query: 413 EVELEFEHRDLHMSNILV 430
           + +    HRD+  SNIL+
Sbjct: 141 KEKHGVIHRDVKPSNILL 158

>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A* Length = 348

 Score = 42.8 bits (101), Expect = 2e-04
 Identities = 19/84 (22%), Positives = 35/84 (41%), Gaps = 13/84 (15%)

Query: 239 RKKILDICQQEDVVSFEDRYPSSALKNCKKIGEGVYGEVFK-----LNNSV-IKIMPIEG 292
           R   L      ++   +D  P     + ++IG G +G V+       +  V IK M   G
Sbjct: 34  RAGSLKDPDVAELFFKDD--PEKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSG 91

Query: 293 DQSVNGEEQKKFREIFSEIMVTKE 316
            QS      +K+++I  E+   ++
Sbjct: 92  KQS-----NEKWQDIIKEVRFLQK 110

>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A* Length = 302

 Score = 40.4 bits (95), Expect = 9e-04
 Identities = 11/83 (13%), Positives = 31/83 (37%), Gaps = 22/83 (26%)

Query: 240 KKILDICQQEDVVSFEDRYPSSALKNCKKIGEGVYGEVFKLNNSV------IKIMPIEGD 293
           ++   + +  D        P+   +   ++G+G +G+V+K  N         K++     
Sbjct: 6   REYEHVRRDLD--------PNEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIET--- 54

Query: 294 QSVNGEEQKKFREIFSEIMVTKE 316
                + +++  +   EI +   
Sbjct: 55  -----KSEEELEDYIVEIEILAT 72

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	562
2vuw_A	336	Serine/threonine-protein kinase haspin; cell cycle	100.0
4b9d_A	350	Serine/threonine-protein kinase NEK1; transferase,	100.0
4aw0_A	311	HPDK1, 3-phosphoinositide-dependent protein kinase	100.0
4fih_A	346	Serine/threonine-protein kinase PAK 4; kinase doma	100.0
3hyh_A	275	Carbon catabolite-derepressing protein kinase; kin	100.0
4fie_A	423	Serine/threonine-protein kinase PAK 4; kinase doma	100.0
3fpq_A	290	Serine/threonine-protein kinase WNK1; protein seri	100.0
3ubd_A	304	Ribosomal protein S6 kinase alpha-3; kinase-inhibi	100.0
3omv_A	307	RAF proto-oncogene serine/threonine-protein kinas;	100.0
4g3f_A	336	NF-kappa-beta-inducing kinase; non-RD kinase, prot	100.0
4asz_A	299	BDNF/NT-3 growth factors receptor; transferase, TR	100.0
4g31_A	299	Eukaryotic translation initiation factor 2-alpha;	100.0
4aoj_A	329	High affinity nerve growth factor receptor; transf	100.0
4ase_A	353	Vascular endothelial growth factor receptor 2; tra	100.0
4f9c_A	361	Cell division cycle 7-related protein kinase; Ser/	100.0
4gt4_A	308	Tyrosine-protein kinase transmembrane receptor RO;	100.0
4b99_A	398	Mitogen-activated protein kinase 7; transferase, i	100.0
3v5w_A	689	G-protein coupled receptor kinase 2; inhibitor com	99.98
3uto_A	573	Twitchin; kinase, muscle sarcomere, transferase; H	99.98
3hmm_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	99.97
3txo_A	353	PKC-L, NPKC-ETA, protein kinase C ETA type; phosph	99.96
3fe3_A	328	MAP/microtubule affinity-regulating kinase 3; seri	99.96
1o6l_A	337	RAC-beta serine/threonine protein kinase; protein	99.96
4dc2_A	396	Protein kinase C IOTA type; kinase, substrate, cel	99.96
3zgw_A	347	Maternal embryonic leucine zipper kinase; transfer	99.96
3fxz_A	297	Serine/threonine-protein kinase PAK 1; transferase	99.96
1rdq_E	350	PKA C-alpha, CAMP-dependent protein kinase, alpha-	99.96
1fot_A	318	TPK1 delta, CAMP-dependent protein kinase type 1;	99.96
2zv2_A	298	Calcium/calmodulin-dependent protein kinase kinas;	99.96
2bdw_A	362	Hypothetical protein K11E8.1D; kinase, calmodulin	99.96
2i0e_A	353	Protein kinase C-beta II; serine/threonine protein	99.96
3a8x_A	345	Protein kinase C IOTA type; transferase; HET: TPO;	99.96
1tki_A	321	Titin; serine kinase, muscle, autoinhibition; 2.00	99.96
3soa_A	444	Calcium/calmodulin-dependent protein kinase type a	99.96
4eqm_A	294	Protein kinase; transferase; HET: ANP; 3.00A {Stap	99.95
4fr4_A	384	YANK1, serine/threonine-protein kinase 32A; struct	99.95
1xjd_A	345	Protein kinase C, theta type; PKC-theta, ATP, AMP,	99.95
3tki_A	323	Serine/threonine-protein kinase CHK1; cell checkpo	99.95
3ttj_A	464	Mitogen-activated protein kinase 10; JNK3, protein	99.95
2yab_A	361	Death-associated protein kinase 2; apoptosis, tran	99.95
4euu_A	319	Serine/threonine-protein kinase TBK1; ATP binding,	99.95
3p86_A	309	Serine/threonine-protein kinase CTR1; ETR1, ERS1,	99.95
3vhe_A	359	Vascular endothelial growth factor receptor 2; kin	99.95
4aw2_A	437	Serine/threonine-protein kinase MRCK alpha; transf	99.95
3lij_A	494	Calcium/calmodulin dependent protein kinase with A	99.95
3niz_A	311	Rhodanese family protein; structural genomics, str	99.95
3s95_A	310	LIMK-1, LIM domain kinase 1; structural genomics,	99.95
3a62_A	327	Ribosomal protein S6 kinase beta-1; kinase domain,	99.95
3mwu_A	486	Calmodulin-domain protein kinase 1; serine/threoni	99.95
3o0g_A	292	Cell division protein kinase 5; kinase activator c	99.95
3c0i_A	351	Peripheral plasma membrane protein CASK; neurexin,	99.95
3kk8_A	284	Calcium/calmodulin dependent protein kinase II; AT	99.95
3v8s_A	410	RHO-associated protein kinase 1; dimerization, myo	99.95
1kob_A	387	Twitchin; kinase, intrasteric regulation; 2.30A {A	99.95
3ork_A	311	Serine/threonine protein kinase; structural genomi	99.95
3is5_A	285	Calcium-dependent protein kinase; CDPK, structural	99.95
3lb7_A	307	RAF proto-oncogene serine/threonine-protein kinas;	99.95
2r5t_A	373	Serine/threonine-protein kinase SGK1; AGC protein	99.95
3pfq_A	674	PKC-B, PKC-beta, protein kinase C beta type; phosp	99.95
3q5i_A	504	Protein kinase; CDPK, malaria, phosphotransferase,	99.95
3i6u_A	419	CDS1, serine/threonine-protein kinase CHK2; Ser/Th	99.95
4ejn_A	446	RAC-alpha serine/threonine-protein kinase; AKT1, a	99.95
3nyv_A	484	Calmodulin-domain protein kinase 1; serine/threoni	99.95
2vd5_A	412	DMPK protein; serine/threonine-protein kinase, kin	99.95
3qd2_B	332	Eukaryotic translation initiation factor 2-alpha;	99.95
2eue_A	275	Carbon catabolite derepressing protein kinase; kin	99.95
3kul_A	325	Ephrin type-A receptor 8; ATP-binding, kinase, nuc	99.95
2y0a_A	326	Death-associated protein kinase 1; transferase, ca	99.95
3uc3_A	361	Serine/threonine-protein kinase SRK2I; SNRK2, ABA	99.95
2psq_A	370	Fibroblast growth factor receptor 2; kinase domain	99.95
3f3z_A	277	Calcium/calmodulin-dependent protein kinase with d	99.95
3h4j_B	336	AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin	99.95
3gni_B	389	Strad alpha; kinase fold, pseudokinase, alpha heli	99.95
3nsz_A	330	CK II alpha, casein kinase II subunit alpha; inhib	99.95
2w4o_A	349	Calcium/calmodulin-dependent protein kinase type I	99.95
2qr7_A	342	Ribosomal protein S6 kinase alpha-3; kinase domain	99.95
3c4z_A	543	Rhodopsin kinase; Ser/Thr kinase, RGS homology dom	99.95
3og7_A	289	AKAP9-BRAF fusion protein; proto-oncogene, V600E,	99.95
3dbq_A	343	Dual specificity protein kinase TTK; MPS1 structur	99.95
3p1a_A	311	MYT1 kinase, membrane-associated tyrosine- and thr	99.95
3ugc_A	295	Tyrosine-protein kinase JAK2; small molecule inhib	99.95
3oz6_A	388	Mitogen-activated protein kinase 1, serine/threon	99.95
1rjb_A	344	FL cytokine receptor; kinase, structure, autoinhib	99.95
2acx_A	576	G protein-coupled receptor kinase 6; GRK, G transf	99.95
3rp9_A	458	Mitogen-activated protein kinase; structural genom	99.95
3soc_A	322	Activin receptor type-2A; structural genomics cons	99.95
2y94_A	476	5'-AMP-activated protein kinase catalytic subunit;	99.94
3lm5_A	327	Serine/threonine-protein kinase 17B; STK17B, serin	99.94
2x4f_A	373	Myosin light chain kinase family member 4; LUNG, b	99.94
3hko_A	345	Calcium/calmodulin-dependent protein kinase with d	99.94
2c30_A	321	Serine/threonine-protein kinase PAK 6; CRIB domain	99.94
3fdn_A	279	Serine/threonine-protein kinase 6; aurora kinase i	99.94
2pmi_A	317	Negative RE, cyclin-dependent protein kinase PHO85	99.94
3kn6_A	325	Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1	99.94
1ob3_A	288	PFPK5, cell division control protein 2 homolog; tr	99.94
2zmd_A	390	Dual specificity protein kinase TTK; MPS1, T686A,	99.94
1nxk_A	400	MAP kinase-activated protein kinase 2; MK2, phosph	99.94
3n9x_A	432	Phosphotransferase; malaria kinase, structural gen	99.94
1u5q_A	348	Serine/threonine protein kinase TAO2; transferase;	99.94
3llt_A	360	Serine/threonine kinase-1, pflammer; lammer kinase	99.94
3sxs_A	268	Cytoplasmic tyrosine-protein kinase BMX; transfera	99.94
3e7e_A	365	HBUB1, BUB1A, mitotic checkpoint serine/threonine-	99.94
4hcu_A	269	Tyrosine-protein kinase ITK/TSK; transferase-trans	99.94
4agu_A	311	Cyclin-dependent kinase-like 1; transferase, phosp	99.94
3tt0_A	382	Basic fibroblast growth factor receptor 1; kinase	99.94
1luf_A	343	Muscle-specific tyrosine kinase receptor MUSK; pho	99.94
1t46_A	313	HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom	99.94
3qup_A	323	Tyrosine-protein kinase receptor TYRO3; protein ki	99.94
1x8b_A	289	WEE1HU, WEE1-like protein kinase; cell cycle, tran	99.94
1mp8_A	281	Focal adhesion kinase 1; tyrosine protein kinase,	99.94
2ivs_A	314	Proto-oncogene tyrosine-protein kinase receptor RE	99.94
3l9p_A	367	Anaplastic lymphoma kinase; kinase domain, ATP-bin	99.94
1t4h_A	290	Serine/threonine-protein kinase WNK1; protein seri	99.94
3q4u_A	301	Activin receptor type-1; structural genomics conso	99.94
2qkw_B	321	Protein kinase; three-helix bundle motif, AVRPTO-P	99.94
3cbl_A	377	C-FES, proto-oncogene tyrosine-protein kinase FES/	99.94
2izr_A	330	Casein kinase I isoform gamma-3; serine/threonine-	99.94
2xrw_A	371	Mitogen-activated protein kinase 8; transcription,	99.94
4eut_A	396	Serine/threonine-protein kinase TBK1; ATP binding,	99.94
2rku_A	294	Serine/threonine-protein kinase PLK1; structure of	99.94
2xir_A	316	Vascular endothelial growth factor receptor 2; ang	99.94
2ycf_A	322	Serine/threonine-protein kinase CHK2; transferase,	99.94
2qol_A	373	Ephrin receptor; receptor tyrosine kinase, juxtame	99.94
2owb_A	335	Serine/threonine-protein kinase PLK1; catalytic do	99.94
3gbz_A	329	Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-	99.94
2y7j_A	365	Phosphorylase B kinase gamma catalytic chain, test	99.94
2i1m_A	333	Macrophage colony-stimulating factor 1 receptor; k	99.94
2vgo_A	284	Serine/threonine-protein kinase 12-A; nucleotide-b	99.94
3f66_A	298	Hepatocyte growth factor receptor; C-Met, protein	99.94
3dtc_A	271	Mitogen-activated protein kinase kinase kinase 9;	99.94
3g33_A	308	Cell division protein kinase 4; Ser/Thr protein ki	99.94
3eqc_A	360	Dual specificity mitogen-activated protein kinase;	99.94
1cm8_A	367	Phosphorylated MAP kinase P38-gamma; phosphorylati	99.94
3cok_A	278	Serine/threonine-protein kinase PLK4; POLO-like ki	99.94
3gen_A	283	Tyrosine-protein kinase BTK; bruton'S tyrosine kin	99.94
2yex_A	276	Serine/threonine-protein kinase CHK1; transferase,	99.94
1csn_A	298	Casein kinase-1; phosphotransferase; HET: ATP; 2.0	99.94
1phk_A	298	Phosphorylase kinase; glycogen metabolism, transfe	99.94
2ac3_A	316	MAP kinase-interacting serine/threonine kinase 2;	99.94
3kmu_A	271	ILK, integrin-linked kinase; cell adhesion, ANK re	99.94
3lxp_A	318	Non-receptor tyrosine-protein kinase TYK2; JAK3, i	99.94
1mqb_A	333	Ephrin type-A receptor 2; tyrosine protein kinase,	99.94
1vzo_A	355	Ribosomal protein S6 kinase alpha 5; protein kinas	99.94
3lxl_A	327	Tyrosine-protein kinase JAK3; TYK2, inflammation,	99.94
4fvq_A	289	Tyrosine-protein kinase JAK2; janus protein kinase	99.94
3qyz_A	364	Mitogen-activated protein kinase 1; transferase, s	99.94
2a2a_A	321	Death-associated protein kinase 2; autoinhibition,	99.94
2nru_A	307	Interleukin-1 receptor-associated kinase 4; inhibi	99.94
4f0f_A	287	Serine/threonine-protein kinase ROCO4; LRRK2, ATP-	99.94
1wak_A	397	Serine/threonine-protein kinase SPRK1; SRPK, trans	99.94
2wei_A	287	Calmodulin-domain protein kinase 1, putative; nucl	99.93
3mtl_A	324	Cell division protein kinase 16; pctaire1, indirub	99.93
3dls_A	335	PAS domain-containing serine/threonine-protein KI;	99.93
3mi9_A	351	Cell division protein kinase 9; P-TEFB, HIV-1, pro	99.93
1zy4_A	303	Serine/threonine-protein kinase GCN2; translation	99.93
2fst_X	367	Mitogen-activated protein kinase 14; active mutant	99.93
3op5_A	364	Serine/threonine-protein kinase VRK1; adenosine tr	99.93
1qcf_A	454	Haematopoetic cell kinase (HCK); tyrosine kinase-i	99.93
3kex_A	325	Receptor tyrosine-protein kinase ERBB-3; kinase do	99.93
2jam_A	304	Calcium/calmodulin-dependent protein kinase type 1	99.93
2h34_A	309	Serine/threonine-protein kinase PKNE; apoenzyme, t	99.93
3brb_A	313	Proto-oncogene tyrosine-protein kinase MER; ATP-bi	99.93
3poz_A	327	Epidermal growth factor receptor; kinase domain, a	99.93
2h6d_A	276	5'-AMP-activated protein kinase catalytic subunit	99.93
4e5w_A	302	Tyrosine-protein kinase JAK1; kinase domain, trans	99.93
3a7i_A	303	MST3 kinase, serine/threonine kinase 24 (STE20 hom	99.93
4aaa_A	331	Cyclin-dependent kinase-like 2; transferase, phosp	99.93
2pvf_A	334	Fibroblast growth factor receptor 2; kinase domain	99.93
3uim_A	326	Brassinosteroid insensitive 1-associated receptor;	99.93
3pls_A	298	Macrophage-stimulating protein receptor; protein k	99.93
2wqm_A	310	Serine/threonine-protein kinase NEK7; ATP-binding,	99.93
3kfa_A	288	Tyrosine-protein kinase ABL1; CML, drug resistance	99.93
3kvw_A	429	DYRK2, dual specificity tyrosine-phosphorylation-r	99.93
3byv_A	377	Rhoptry kinase; malaria, transferase, structural g	99.93
3lzb_A	327	Epidermal growth factor receptor; epidermal growth	99.93
1p4o_A	322	Insulin-like growth factor I receptor protein; IGF	99.93
3bhy_A	283	Death-associated protein kinase 3; death associate	99.93
4exu_A	371	Mitogen-activated protein kinase 13; P38 kinase, t	99.93
2w5a_A	279	Serine/threonine-protein kinase NEK2; Ser/Thr prot	99.93
1qpc_A	279	LCK kinase; alpha beta fold, transferase; HET: PTR	99.93
2j7t_A	302	Serine/threonine-protein kinase 10; transferase, A	99.93
3eb0_A	383	Putative uncharacterized protein; kinase cryptospo	99.93
1z57_A	339	Dual specificity protein kinase CLK1; protein tyro	99.93
1k9a_A	450	Carboxyl-terminal SRC kinase; COOH-terminal SRC ki	99.93
2buj_A	317	Serine/threonine-protein kinase 16; transferase, A	99.93
3pg1_A	362	Mitogen-activated protein kinase, putative (MAP K	99.93
1ua2_A	346	CAK, cell division protein kinase 7; cell cycle, p	99.93
2x7f_A	326	TRAF2 and NCK-interacting protein kinase; serine/t	99.93
3fme_A	290	Dual specificity mitogen-activated protein kinase;	99.93
3t9t_A	267	Tyrosine-protein kinase ITK/TSK; kinase domain, al	99.93
1opk_A	495	P150, C-ABL, proto-oncogene tyrosine-protein kinas	99.93
3mdy_A	337	Bone morphogenetic protein receptor type-1B; compl	99.93
4hgt_A	296	Casein kinase I isoform delta; CK1D, inhibitor, tr	99.93
3cc6_A	281	Protein tyrosine kinase 2 beta; focal adhesion kin	99.93
1u59_A	287	Tyrosine-protein kinase ZAP-70; transferase; HET:	99.93
2wtk_C	305	Serine/threonine-protein kinase 11; transferase-me	99.93
3com_A	314	Serine/threonine-protein kinase 4; MST1, STE20-lik	99.93
3c1x_A	373	Hepatocyte growth factor receptor; receptor tyrosi	99.93
1fmk_A	452	C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros	99.93
3g2f_A	336	Bone morphogenetic protein receptor type-2; kinase	99.93
3coi_A	353	Mitogen-activated protein kinase 13; P38D, P38delt	99.93
1j1b_A	420	Glycogen synthase kinase-3 beta; complex, TAU, AMP	99.93
3q60_A	371	ROP5B; pseudokinase, transferase; HET: ATP; 1.72A	99.93
2pml_X	348	PFPK7, Ser/Thr protein kinase; phosphorylati trans	99.93
2eva_A	307	TAK1 kinase - TAB1 chimera fusion protein; transfe	99.93
1xbb_A	291	Tyrosine-protein kinase SYK; gleevec, STI-571, ima	99.93
3gxj_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	99.93
2eu9_A	355	Dual specificity protein kinase CLK3; kinase domai	99.93
1u46_A	291	ACK-1, activated CDC42 kinase 1; tyrosine kinase,	99.93
3uzp_A	296	CKI-delta, CKID, casein kinase I isoform delta; CK	99.93
2r3i_A	299	Cell division protein kinase 2; serine/threonine-p	99.93
2w1i_A	326	JAK2; chromosomal rearrangement, nucleotide-bindin	99.93
3ll6_A	337	Cyclin G-associated kinase; transferase, protein k	99.92
4e7w_A	394	Glycogen synthase kinase 3; GSK3, PTyr195, transfe	99.92
3rgf_A	405	Cyclin-dependent kinase 8; protein kinase complex,	99.92
2b9h_A	353	MAP kinase FUS3, mitogen-activated protein kinase	99.92
2h8h_A	535	Proto-oncogene tyrosine-protein kinase SRC; SRC ki	99.92
4fl3_A	635	Tyrosine-protein kinase SYK; transferase; HET: ANP	99.92
3an0_A	340	Dual specificity mitogen-activated protein kinase;	99.92
2a19_B	284	Interferon-induced, double-stranded RNA-activated	99.92
2i6l_A	320	Mitogen-activated protein kinase 6; MAPK6, ERK3, e	99.92
2jii_A	352	Serine/threonine-protein kinase VRK3 molecule: VA	99.92
2vwi_A	303	Serine/threonine-protein kinase OSR1; STE kinase,	99.92
1fvr_A	327	Tyrosine-protein kinase TIE-2; tyrosine kinase, tr	99.92
2ozo_A	613	Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t	99.92
3cek_A	313	Dual specificity protein kinase TTK; HMPS1, PYT, E	99.92
2yfx_A	327	Tyrosine-protein kinase receptor; nucleotide-bindi	99.92
2vx3_A	382	Dual specificity tyrosine-phosphorylation- regula	99.92
1byg_A	278	CSK, protein (C-terminal SRC kinase); protein kina	99.92
2clq_A	295	Mitogen-activated protein kinase kinase kinase 5;	99.92
1q8y_A	373	SR protein kinase; transferase; HET: ADP ADE; 2.05	99.92
1b6c_B	342	TGF-B superfamily receptor type I; complex (isomer	99.92
2pzi_A	681	Probable serine/threonine-protein kinase PKNG; ATP	99.92
3e3p_A	360	Protein kinase, putative glycogen synthase kinase;	99.92
1blx_A	326	Cyclin-dependent kinase 6; inhibitor protein, cycl	99.92
3sv0_A	483	Casein kinase I-like; typical kinase domain fold,	99.92
2j0j_A	656	Focal adhesion kinase 1; cell migration, FERM, tra	99.92
2dyl_A	318	Dual specificity mitogen-activated protein kinase	99.92
4azs_A	569	Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15	99.92
3aln_A	327	Dual specificity mitogen-activated protein kinase;	99.91
3fhr_A	336	MAP kinase-activated protein kinase 3; kinase-inhi	99.91
2v62_A	345	Serine/threonine-protein kinase VRK2; transferase,	99.91
3uqc_A	286	Probable conserved transmembrane protein; structur	99.91
2y4i_B	319	KSR2, HKSR2, kinase suppressor of RAS 2; transfera	99.91
2rio_A	434	Serine/threonine-protein kinase/endoribonuclease I	99.9
3m2w_A	299	MAP kinase-activated protein kinase 2; small molec	99.9
2iwi_A	312	Serine/threonine-protein kinase PIM-2; nucleotide-	99.9
3p23_A	432	Serine/threonine-protein kinase/endoribonuclease;	99.9
3a99_A	320	Proto-oncogene serine/threonine-protein kinase PI;	99.9
3qa8_A	676	MGC80376 protein; kinase ubiquitin-like domain, ph	99.9
3dzo_A	413	Rhoptry kinase domain; parasitic disease, transfer	99.87
3en9_A	540	Glycoprotease, O-sialoglycoprotein endopeptidase/p	99.85
1zar_A	282	RIO2 kinase; serine kinase, winged-helix, RIO doma	99.84
1zth_A	258	RIO1 serine protein kinase; ribosome biogenesis, r	99.78
4gyi_A	397	RIO2 kinase; protein kinase, ADP complex, phosphoa	99.66
3tm0_A	263	Aminoglycoside 3'-phosphotransferase; protein kina	99.15
1nd4_A	264	Aminoglycoside 3'-phosphotransferase; protein kina	99.04
3dxp_A	359	Putative acyl-COA dehydrogenase; protein kinase-li	98.99
3r70_A	320	Aminoglycoside phosphotransferase; structural geno	98.57
3sg8_A	304	APH(2'')-ID; antibiotic resistance enzyme, transfe	98.42
3tdw_A	306	Gentamicin resistance protein; kinase, phosphoryl	98.41
4gkh_A	272	Aminoglycoside 3'-phosphotransferase APHA1-IAB; py	98.09
3ovc_A	362	Hygromycin-B 4-O-kinase; aminoglycoside phosphotra	98.0
2q83_A	346	YTAA protein; 2635576, structural genomics, joint	97.78
3d1u_A	288	Putative fructosamine-3-kinase; YP_290396.1, struc	97.77
3ats_A	357	Putative uncharacterized protein; hypothetical pro	97.68
2olc_A	397	MTR kinase, methylthioribose kinase; kinase ADP-2H	97.64
3dxq_A	301	Choline/ethanolamine kinase family protein; NP_106	97.1
2ppq_A	322	HSK, HK, homoserine kinase; structural genomics, M	97.04
3jr1_A	312	Putative fructosamine-3-kinase; YP_719053.1, struc	96.69
2pyw_A	420	Uncharacterized protein; 5-methylthioribose kinase	96.68
3f7w_A	288	Putative fructosamine-3-kinase; YP_290396.1, struc	96.45
1zyl_A	328	Hypothetical protein YIHE; putative protein kinase	95.57
3feg_A	379	Choline/ethanolamine kinase; non-protein kinase, c	94.71
3csv_A	333	Aminoglycoside phosphotransferase; YP_614837.1, ph	88.73
2qg7_A	458	Ethanolamine kinase PV091845; malaria, SGC, struct	85.97
3i1a_A	339	Spectinomycin phosphotransferase; protein kinase,	84.91
3c5i_A	369	Choline kinase; choline, kinase, malaria, transfer	84.56
1nw1_A	429	Choline kinase (49.2 KD); phospholipid synthesis,	83.38

>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A

Probab=100.00  E-value=1.2e-43  Score=366.72  Aligned_cols=316  Identities=40%  Similarity=0.707  Sum_probs=265.1

Q ss_pred             hhhccCccccccccCCCCCCceeeeeeccCceEEEEE----eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCC
Q psy9184         244 DICQQEDVVSFEDRYPSSALKNCKKIGEGVYGEVFKL----NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSD  319 (562)
Q Consensus       244 ~~~~q~~~~~f~~~~~~~~y~~~~~LG~GsfG~Vyka----~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h  319 (562)
                      ..|.|..+.+|...+..++|++.+.||+|+||.||+|    +.||||++........++......+.+.+|+.+++.++.
T Consensus         3 ~~c~~~~~~~~~~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~   82 (336)
T 2vuw_A            3 GECSQKGPVPFSHCLPTEKLQRCEKIGEGVFGEVFQTIADHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSL   82 (336)
T ss_dssp             -----CCCBCHHHHSCHHHHHTCEEEEEETTEEEEEEEETTEEEEEEEEEESCSSCBTTBCCBCHHHHHHHHHHHHHHHH
T ss_pred             ccccCCCCcchhhhcccccchheeeecccCceEEEEEEeCCceEEEEEEecCCccccccccchhHHHHHHHHHHHHHHHH
Confidence            4578888888887777789999999999999999999    899999999865332222334455788999999999986


Q ss_pred             ccccCCCCCCcccccccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc--cCCHHH
Q psy9184         320 LQYRTENSTPCFTELLKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK--YRSPNQ  397 (562)
Q Consensus       320 ~~~~~~n~~p~fv~l~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~--~l~e~~  397 (562)
                      ++....+..||+|.+.+++++.+.+||||++++++|.+..++.+..|..+..+.+|+|||||.+|++++.+.  .+++.+
T Consensus        83 l~~~~~~~h~niv~l~~~~~~~~~~hp~iv~~~~~~~~~~~~~~~~~~~~~~~~~~lv~E~~~~g~ll~~~~~~~~~~~~  162 (336)
T 2vuw_A           83 LSGEVCNRTEGFIGLNSVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEFGGIDLEQMRTKLSSLAT  162 (336)
T ss_dssp             GGGCSSSBCCCBCCEEEEEEEESSCCHHHHHHHHHHHHHTCCSSCCSCCCCTTCEEEEEEEECCCEETGGGTTTCCCHHH
T ss_pred             hhccccccCCchhhhcceeEecCCCcHHHHHHHHHHhhhccccccCccccccCeEEEEEEecCCCccHHHHHhcCCCHHH
Confidence            555555567999999999999999999999999999987777777888888899999999999998888874  489999


Q ss_pred             HHHHHHHHHHHHHHHH-hhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecCCcEEEee
Q psy9184         398 TYAMILQVVFSLAVAE-VELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVGEKICYYD  476 (562)
Q Consensus       398 i~~I~~QIl~aL~yLH-~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~~g~v~~~  476 (562)
                      ++.++.||+.||.||| + +||+||||||+|||++.++.....+..++.....+..+..+||+|||+|+......+++++
T Consensus       163 ~~~i~~qi~~aL~~lH~~-~~ivHrDlKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~vkL~DFG~a~~~~~~~~~gt~  241 (336)
T 2vuw_A          163 AKSILHQLTASLAVAEAS-LRFEHRDLHWGNVLLKKTSLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLERDGIVVFCD  241 (336)
T ss_dssp             HHHHHHHHHHHHHHHHHH-HCCBCSCCCGGGEEEEECSCSEEEEEETTEEEEEECTTEEEEECCCTTCBEEETTEEECCC
T ss_pred             HHHHHHHHHHHHHHHHHh-CCEeECCCCHHHEEEeccCCcceeeeccCccccccCCCceEEEeeccccEecCCCcEEEee
Confidence            9999999999999999 8 6999999999999999987655556666666666677789999999999999888889999


Q ss_pred             cCCCccccCCCCCcHHHHHHHhhcccCCCCCCCCCCChhhhHHHHHHHHhhcccCCCCCCCch--hHHHHHHHHHHHhcC
Q psy9184         477 LSQDEELFEGEGDYQFDMYRMMRKQCQNNWQNFTPKNNVFWIHYLVDKATCLKKGYQYLRAPR--HQAFELLEELGQNAL  554 (562)
Q Consensus       477 l~~~pelF~g~~~~q~dIy~lm~~~~~~~W~~~~P~tn~~wl~yl~~~Ll~~~~~~~~~~~~~--~~~~~~l~~l~~~~l  554 (562)
                      .|++||+|.|..++..|||++|+.+....|.++.|+.+..|+.++...++. ...+.......  ...-..+.+|.++||
T Consensus       242 ~y~aPE~~~g~~~~~~Diwsl~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~s~~~~dli~~~L  320 (336)
T 2vuw_A          242 VSMDEDLFTGDGDYQFDIYRLMKKENNNRWGEYHPYSNVLWLHYLTDKMLK-QMTFKTKCNTPAMKQIKRKIQEFHRTML  320 (336)
T ss_dssp             CTTCSGGGCCCSSHHHHHHHHHHHHHTTCTTSCCTHHHHHHHHHHHHHHHH-TCCCSSCCCSHHHHHHHHHHHHHHHHGG
T ss_pred             cccChhhhcCCCccceehhhhhCCCCcccccccCCCcchhhhhHHHHhhhh-hhccCcccchhhhhhcCHHHHHHHHHHh
Confidence            999999999988888999999999999999999999999999999999886 44444433322  223678999999999


Q ss_pred             CCcCcCC
Q psy9184         555 HFDSCYE  561 (562)
Q Consensus       555 ~~~s~~~  561 (562)
                      +++||.+
T Consensus       321 ~~dsa~e  327 (336)
T 2vuw_A          321 NFSSATD  327 (336)
T ss_dssp             GSSSHHH
T ss_pred             ccCCHHH
Confidence            9998754

>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*

Probab=100.00  E-value=6.2e-38  Score=329.09  Aligned_cols=229  Identities=18%  Similarity=0.195  Sum_probs=174.2

Q ss_pred             CCCCceeeeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCcccc
Q psy9184         260 SSALKNCKKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTE  333 (562)
Q Consensus       260 ~~~y~~~~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~  333 (562)
                      .++|+++++||+|+||+||+|      +.||||++....      ......+.+.+|+.+|+.|+|              
T Consensus        23 me~Y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~------~~~~~~~~~~~E~~il~~l~H--------------   82 (350)
T 4b9d_A           23 MEKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISR------MSSKEREESRREVAVLANMKH--------------   82 (350)
T ss_dssp             CCCEEEEEEC------CEEEEEETTTCCEEEEEEEECTT------SCHHHHHHHHHHHHHHHHCCC--------------
T ss_pred             ccceEEeEEEecCCCeEEEEEEECCCCCEEEEEEEehHH------CCHHHHHHHHHHHHHHHHCCC--------------
Confidence            378999999999999999999      799999998764      123456788999999999998              


Q ss_pred             cccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc-----cCCHHHHHHHHHHHHHH
Q psy9184         334 LLKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK-----YRSPNQTYAMILQVVFS  408 (562)
Q Consensus       334 l~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~-----~l~e~~i~~I~~QIl~a  408 (562)
                                  ||||+++++|.+             ++.+|||||||+||+|.+.+.     .+++.+++.|+.||+.|
T Consensus        83 ------------pnIV~~~~~~~~-------------~~~~yiVmEy~~gg~L~~~i~~~~~~~~~e~~~~~~~~qi~~a  137 (350)
T 4b9d_A           83 ------------PNIVQYRESFEE-------------NGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLA  137 (350)
T ss_dssp             ------------TTBCCEEEEEEE-------------TTEEEEEEECCTTCBHHHHHHHTTTCCCCHHHHHHHHHHHHHH
T ss_pred             ------------CCCCcEEEEEEE-------------CCEEEEEEeCCCCCcHHHHHHHcCCCCCCHHHHHHHHHHHHHH
Confidence                        999999999986             568999999999999988773     37899999999999999


Q ss_pred             HHHHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecC-----CcEEEeecCCCccc
Q psy9184         409 LAVAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVG-----EKICYYDLSQDEEL  483 (562)
Q Consensus       409 L~yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~-----~g~v~~~l~~~pel  483 (562)
                      |.|||+ .|||||||||+||||+.++                    .+||+|||+|+....     ..++++..|++||+
T Consensus       138 L~ylH~-~~IiHRDlKp~NILl~~~g--------------------~vKl~DFGla~~~~~~~~~~~~~~GT~~YmAPE~  196 (350)
T 4b9d_A          138 LKHVHD-RKILHRDIKSQNIFLTKDG--------------------TVQLGDFGIARVLNSTVELARACIGTPYYLSPEI  196 (350)
T ss_dssp             HHHHHH-TTCEETTCCGGGEEECTTC--------------------CEEECSTTEESCCCHHHHHHHHHHSCCTTCCHHH
T ss_pred             HHHHHH-CCeeeccCCHHHEEECCCC--------------------CEEEcccccceeecCCcccccccCCCccccCHHH
Confidence            999999 7999999999999999887                    799999999998754     34568999999999


Q ss_pred             cCCC-CCcHHHHHHHhhcccCCCCCCCCCCChhhhHHHHHHHHhhcccCCCCCCCchhHHHHHHHHHHHhcCCCcCcCC
Q psy9184         484 FEGE-GDYQFDMYRMMRKQCQNNWQNFTPKNNVFWIHYLVDKATCLKKGYQYLRAPRHQAFELLEELGQNALHFDSCYE  561 (562)
Q Consensus       484 F~g~-~~~q~dIy~lm~~~~~~~W~~~~P~tn~~wl~yl~~~Ll~~~~~~~~~~~~~~~~~~~l~~l~~~~l~~~s~~~  561 (562)
                      +.+. ++..+|||++ |..+..+..+..||...-.. .+..+.+.  ..++......   -..+++|...+|+.+...|
T Consensus       197 l~~~~y~~~~DiwSl-GvilyemltG~~PF~~~~~~-~~~~~i~~--~~~~~~~~~~---s~~~~~li~~~L~~dP~~R  268 (350)
T 4b9d_A          197 CENKPYNNKSDIWAL-GCVLYELCTLKHAFEAGSMK-NLVLKIIS--GSFPPVSLHY---SYDLRSLVSQLFKRNPRDR  268 (350)
T ss_dssp             HTTCCCCHHHHHHHH-HHHHHHHHHSSCSCCCSSHH-HHHHHHHH--TCCCCCCTTS---CHHHHHHHHHHTCSSGGGS
T ss_pred             HCCCCCCcHHHHHHH-HHHHHHHHHCCCCCCCcCHH-HHHHHHHc--CCCCCCCccC---CHHHHHHHHHHccCChhHC
Confidence            9984 6777999885 44444455566666433212 22333333  1232222111   2367778888888887665

>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...

Probab=100.00  E-value=3.6e-38  Score=325.86  Aligned_cols=229  Identities=18%  Similarity=0.169  Sum_probs=182.3

Q ss_pred             CCCceeeeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCccccc
Q psy9184         261 SALKNCKKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTEL  334 (562)
Q Consensus       261 ~~y~~~~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~l  334 (562)
                      ++|++++.||+|+||+||+|      +.||||++.+..     .......+.+.+|+.+|+.|+|               
T Consensus        32 ~dy~i~~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~-----~~~~~~~~~~~~E~~il~~l~H---------------   91 (311)
T 4aw0_A           32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRH-----IIKENKVPYVTRERDVMSRLDH---------------   91 (311)
T ss_dssp             GGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHH-----HHHTTCHHHHHHHHHHHTTCCC---------------
T ss_pred             cccEEEEEEecccCeEEEEEEECCCCCEEEEEEEEHHH-----CCCHHHHHHHHHHHHHHHhCCC---------------
Confidence            56999999999999999999      799999998642     1223345788999999999998               


Q ss_pred             ccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc---cCCHHHHHHHHHHHHHHHHH
Q psy9184         335 LKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK---YRSPNQTYAMILQVVFSLAV  411 (562)
Q Consensus       335 ~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~---~l~e~~i~~I~~QIl~aL~y  411 (562)
                                 ||||+++++|++             ++.+|||||||+||+|.+.+.   .+++.+++.++.||+.||.|
T Consensus        92 -----------pnIv~l~~~~~~-------------~~~~yivmEy~~gG~L~~~i~~~~~l~e~~~~~~~~qi~~al~y  147 (311)
T 4aw0_A           92 -----------PFFVKLYFTFQD-------------DEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEY  147 (311)
T ss_dssp             -----------TTBCCEEEEEEC-------------SSEEEEEECCCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHH
T ss_pred             -----------CCCCeEEEEEEe-------------CCEEEEEEecCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHH
Confidence                       999999999986             568999999999999888774   49999999999999999999


Q ss_pred             HHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecC-------CcEEEeecCCCcccc
Q psy9184         412 AEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVG-------EKICYYDLSQDEELF  484 (562)
Q Consensus       412 LH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~-------~g~v~~~l~~~pelF  484 (562)
                      ||+ .||+||||||+|||++.++                    .+||+|||+|+....       ...++|..|++||++
T Consensus       148 lH~-~~IiHRDlKPeNILl~~~g--------------------~vKl~DFGla~~~~~~~~~~~~~~~~GTp~YmAPEvl  206 (311)
T 4aw0_A          148 LHG-KGIIHRDLKPENILLNEDM--------------------HIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELL  206 (311)
T ss_dssp             HHH-TTEECSCCSGGGEEECTTS--------------------CEEECCCTTCEECCTTTTCCCBCCCCSCGGGCCHHHH
T ss_pred             HHH-CCCccCCCCHHHeEEcCCC--------------------CEEEEEcCCceecCCCCCcccccCcccCcccCCHHHH
Confidence            999 7999999999999999887                    799999999998743       245689999999999


Q ss_pred             CCC-CCcHHHHHHHhhcccCCCCCCCCCCChhhhHHHHHHHHhhcccCCCCCCCchhHHHHHHHHHHHhcCCCcCcCCC
Q psy9184         485 EGE-GDYQFDMYRMMRKQCQNNWQNFTPKNNVFWIHYLVDKATCLKKGYQYLRAPRHQAFELLEELGQNALHFDSCYEM  562 (562)
Q Consensus       485 ~g~-~~~q~dIy~lm~~~~~~~W~~~~P~tn~~wl~yl~~~Ll~~~~~~~~~~~~~~~~~~~l~~l~~~~l~~~s~~~~  562 (562)
                      .+. ++..+|||++ |..+..+..+..||...- ..-+..+.+.....|+..-      ...++.|..+||+.+...|+
T Consensus       207 ~~~~y~~~~DiWSl-Gvilyeml~G~~PF~~~~-~~~~~~~i~~~~~~~p~~~------s~~~~dli~~lL~~dp~~R~  277 (311)
T 4aw0_A          207 TEKSACKSSDLWAL-GCIIYQLVAGLPPFRAGN-EGLIFAKIIKLEYDFPEKF------FPKARDLVEKLLVLDATKRL  277 (311)
T ss_dssp             HHSCBCHHHHHHHH-HHHHHHHHHSSCSSCCSS-HHHHHHHHHHTCCCCCTTC------CHHHHHHHHHHSCSSGGGST
T ss_pred             cCCCCCcHHHHHHH-HHHHHHHHhCCCCCCCCC-HHHHHHHHHcCCCCCCccc------CHHHHHHHHHHccCCHhHCc
Confidence            874 5667999875 444545556667774322 2223344444234444322      34677889999998877663

>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*

Probab=100.00  E-value=1.5e-37  Score=325.65  Aligned_cols=230  Identities=18%  Similarity=0.223  Sum_probs=178.1

Q ss_pred             CCCCceeeeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCcccc
Q psy9184         260 SSALKNCKKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTE  333 (562)
Q Consensus       260 ~~~y~~~~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~  333 (562)
                      ...|++.++||+|+||.||+|      +.||||++.....        ...+.+.+|+.+|+.|+|              
T Consensus        73 ~~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~--------~~~~~~~~Ei~il~~l~H--------------  130 (346)
T 4fih_A           73 RSYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQ--------QRRELLFNEVVIMRDYQH--------------  130 (346)
T ss_dssp             GGTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGC--------SSGGGGHHHHHHHHHCCC--------------
T ss_pred             hHhcEEeEEeecCcCeEEEEEEECCCCCEEEEEEEecCch--------hHHHHHHHHHHHHHhCCC--------------
Confidence            356999999999999999999      7899999986531        122457899999999998              


Q ss_pred             cccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc--cCCHHHHHHHHHHHHHHHHH
Q psy9184         334 LLKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK--YRSPNQTYAMILQVVFSLAV  411 (562)
Q Consensus       334 l~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~--~l~e~~i~~I~~QIl~aL~y  411 (562)
                                  ||||+++++|.+             ++.+|||||||+||++.+.+.  .+++.+++.|+.||+.||+|
T Consensus       131 ------------pnIV~l~~~~~~-------------~~~~~ivmEy~~gg~L~~~l~~~~l~e~~~~~~~~qi~~aL~y  185 (346)
T 4fih_A          131 ------------ENVVEMYNSYLV-------------GDELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLQALSV  185 (346)
T ss_dssp             ------------TTBCCEEEEEEE-------------TTEEEEEECCCTTEEHHHHHHHSCCCHHHHHHHHHHHHHHHHH
T ss_pred             ------------CCCCcEEEEEEE-------------CCEEEEEEeCCCCCcHHHHHHcCCCCHHHHHHHHHHHHHHHHH
Confidence                        999999999986             568999999999998876654  49999999999999999999


Q ss_pred             HHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecC-----CcEEEeecCCCccccCC
Q psy9184         412 AEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVG-----EKICYYDLSQDEELFEG  486 (562)
Q Consensus       412 LH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~-----~g~v~~~l~~~pelF~g  486 (562)
                      ||+ .|||||||||+||||+.++                    .+||+|||+|+....     ...++|..|++||++.+
T Consensus       186 lH~-~~IiHRDlKp~NILl~~~g--------------------~vKl~DFGla~~~~~~~~~~~~~~GTp~YmAPEvl~~  244 (346)
T 4fih_A          186 LHA-QGVIHRDIKSDSILLTHDG--------------------RVKLSDFGFCAQVSKEVPRRKSLVGTPYWMAPELISR  244 (346)
T ss_dssp             HHH-TTEECCCCSGGGEEECTTC--------------------CEEECCCTTCEECCSSSCCBCCCCSCGGGCCHHHHTT
T ss_pred             HHH-CCcccccCCHHHEEECCCC--------------------CEEEecCcCceecCCCCCcccccccCcCcCCHHHHCC
Confidence            999 7999999999999999887                    799999999998754     34568999999999987


Q ss_pred             C-CCcHHHHHHHhhcccCCCCCCCCCCChhhhHHHHHHHHhhcccCCCCCCCchhHHHHHHHHHHHhcCCCcCcCCC
Q psy9184         487 E-GDYQFDMYRMMRKQCQNNWQNFTPKNNVFWIHYLVDKATCLKKGYQYLRAPRHQAFELLEELGQNALHFDSCYEM  562 (562)
Q Consensus       487 ~-~~~q~dIy~lm~~~~~~~W~~~~P~tn~~wl~yl~~~Ll~~~~~~~~~~~~~~~~~~~l~~l~~~~l~~~s~~~~  562 (562)
                      . ++...|||++ |..+..+..+..||.+...... ...... ...+..  ......-..++.|..++|+.+...|+
T Consensus       245 ~~y~~~~DiWSl-Gvilyeml~G~~PF~~~~~~~~-~~~i~~-~~~~~~--~~~~~~s~~~~dli~~~L~~dP~~R~  316 (346)
T 4fih_A          245 LPYGPEVDIWSL-GIMVIEMVDGEPPYFNEPPLKA-MKMIRD-NLPPRL--KNLHKVSPSLKGFLDRLLVRDPAQRA  316 (346)
T ss_dssp             CCBCTHHHHHHH-HHHHHHHHHSSCTTTTSCHHHH-HHHHHH-SSCCCC--SCGGGSCHHHHHHHHHHSCSSTTTSC
T ss_pred             CCCCcHHHHHHH-HHHHHHHHHCCCCCCCcCHHHH-HHHHHc-CCCCCC--CccccCCHHHHHHHHHHcCCChhHCc
Confidence            4 6777999885 4444455556667644332222 222233 111111  11122245778889999999887764

>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A

Probab=100.00  E-value=8.5e-37  Score=310.62  Aligned_cols=228  Identities=17%  Similarity=0.170  Sum_probs=165.8

Q ss_pred             CCCceeeeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCccccc
Q psy9184         261 SALKNCKKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTEL  334 (562)
Q Consensus       261 ~~y~~~~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~l  334 (562)
                      ++|++.+.||+|+||+||+|      +.||||++.+..     .........+.+|+.+|+.++|               
T Consensus        13 g~Y~i~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~-----~~~~~~~~~~~~Ei~il~~l~H---------------   72 (275)
T 3hyh_A           13 GNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKV-----LAKSDMQGRIEREISYLRLLRH---------------   72 (275)
T ss_dssp             -CCEEEEEEEC---CCEEEEECTTTCCEEEEEEEECC-----------CHHHHHHHHHHHHHCCC---------------
T ss_pred             eCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEeHHH-----cCCHHHHHHHHHHHHHHHHCCC---------------
Confidence            67999999999999999999      899999998754     1223344678999999999998               


Q ss_pred             ccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc---cCCHHHHHHHHHHHHHHHHH
Q psy9184         335 LKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK---YRSPNQTYAMILQVVFSLAV  411 (562)
Q Consensus       335 ~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~---~l~e~~i~~I~~QIl~aL~y  411 (562)
                                 ||||+++++|.+             ++.+|+||||| +|++++.+.   .+++.+++.++.||+.||+|
T Consensus        73 -----------pnIv~~~~~~~~-------------~~~~~ivmEy~-~g~L~~~l~~~~~l~e~~~~~~~~qi~~al~y  127 (275)
T 3hyh_A           73 -----------PHIIKLYDVIKS-------------KDEIIMVIEYA-GNELFDYIVQRDKMSEQEARRFFQQIISAVEY  127 (275)
T ss_dssp             -----------TTBCCEEEEEEC-------------SSEEEEEEECC-CEEHHHHHHHSCSCCHHHHHHHHHHHHHHHHH
T ss_pred             -----------CCCCeEEEEEEE-------------CCEEEEEEeCC-CCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHH
Confidence                       999999999986             56899999999 577877764   49999999999999999999


Q ss_pred             HHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecC----CcEEEeecCCCccccCCC
Q psy9184         412 AEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVG----EKICYYDLSQDEELFEGE  487 (562)
Q Consensus       412 LH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~----~g~v~~~l~~~pelF~g~  487 (562)
                      ||+ +||+||||||+|||++.++                    .+||+|||+|+....    ...++|+.|++||++.+.
T Consensus       128 lH~-~~IiHRDiKP~NILl~~~~--------------------~vkl~DFGla~~~~~~~~~~~~~GT~~Y~APE~~~~~  186 (275)
T 3hyh_A          128 CHR-HKIVHRDLKPENLLLDEHL--------------------NVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVISGK  186 (275)
T ss_dssp             HHH-TTCCCCCCCTTTEEECTTC--------------------CEEECCSSCC---------------CTTSCHHHHSSS
T ss_pred             HHH-CCcccccCChHHeEECCCC--------------------CEEEeecCCCeecCCCCccCCeeECcccCChhhhcCC
Confidence            999 7999999999999999886                    799999999987654    346789999999999986


Q ss_pred             C--CcHHHHHHHhhcccCCCCCCCCCCChhhhHHHHHHHHhhcccCCCCCCCchhHHHHHHHHHHHhcCCCcCcCCC
Q psy9184         488 G--DYQFDMYRMMRKQCQNNWQNFTPKNNVFWIHYLVDKATCLKKGYQYLRAPRHQAFELLEELGQNALHFDSCYEM  562 (562)
Q Consensus       488 ~--~~q~dIy~lm~~~~~~~W~~~~P~tn~~wl~yl~~~Ll~~~~~~~~~~~~~~~~~~~l~~l~~~~l~~~s~~~~  562 (562)
                      .  ....|||++. ..+..+..+..|+.... ..-+.+........++..-      -..+.+|..+||+.+...|+
T Consensus       187 ~y~~~~~DiwSlG-vily~lltg~~PF~~~~-~~~~~~~i~~~~~~~p~~~------s~~~~~li~~~L~~dP~~R~  255 (275)
T 3hyh_A          187 LYAGPEVDVWSCG-VILYVMLCRRLPFDDES-IPVLFKNISNGVYTLPKFL------SPGAAGLIKRMLIVNPLNRI  255 (275)
T ss_dssp             SCCCTHHHHHHHH-HHHHHHHHSSCSSCCSS-HHHHHHHHHHTCCCCCTTS------CHHHHHHHHHHSCSSGGGSC
T ss_pred             CCCCChhhhHHHH-HHHHHHHHCCCCCCCCC-HHHHHHHHHcCCCCCCCCC------CHHHHHHHHHHccCChhHCc
Confidence            4  3569998853 33434555666664432 2223333443122333221      23677889999999887764

>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}

Probab=100.00  E-value=5.6e-37  Score=329.15  Aligned_cols=231  Identities=19%  Similarity=0.232  Sum_probs=179.6

Q ss_pred             CCCCCceeeeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCccc
Q psy9184         259 PSSALKNCKKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFT  332 (562)
Q Consensus       259 ~~~~y~~~~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv  332 (562)
                      +...|+++++||+|+||.||+|      +.||||++.....        ...+.+.+|+.+|+.|+|             
T Consensus       149 p~~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~--------~~~~~~~~Ei~il~~l~H-------------  207 (423)
T 4fie_A          149 PRSYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQ--------QRRELLFNEVVIMRDYQH-------------  207 (423)
T ss_dssp             GGGTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESTTC--------SSGGGHHHHHHHHHHCCC-------------
T ss_pred             hhHhcEeeeEeccCcCcEEEEEEECCCCCEEEEEEEeccch--------hHHHHHHHHHHHHHhCCC-------------
Confidence            3467999999999999999999      7899999987541        122457899999999998             


Q ss_pred             ccccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc--cCCHHHHHHHHHHHHHHHH
Q psy9184         333 ELLKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK--YRSPNQTYAMILQVVFSLA  410 (562)
Q Consensus       333 ~l~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~--~l~e~~i~~I~~QIl~aL~  410 (562)
                                   ||||+++++|.+             ++.+|||||||+||+|.+.+.  .+++.+++.|+.||+.||+
T Consensus       208 -------------pnIV~l~~~~~~-------------~~~~~iVmEy~~gG~L~~~i~~~~l~e~~~~~~~~qil~aL~  261 (423)
T 4fie_A          208 -------------ENVVEMYNSYLV-------------GDELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLQALS  261 (423)
T ss_dssp             -------------TTBCCEEEEEEE-------------TTEEEEEEECCTTEEHHHHHHHSCCCHHHHHHHHHHHHHHHH
T ss_pred             -------------CCCCceEEEEEE-------------CCEEEEEEeCCCCCcHHHHHhccCCCHHHHHHHHHHHHHHHH
Confidence                         999999999986             568999999999998876654  4999999999999999999


Q ss_pred             HHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecC-----CcEEEeecCCCccccC
Q psy9184         411 VAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVG-----EKICYYDLSQDEELFE  485 (562)
Q Consensus       411 yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~-----~g~v~~~l~~~pelF~  485 (562)
                      |||+ .|||||||||+||||+.++                    .+||+|||+|+....     ...+++..|++||++.
T Consensus       262 ylH~-~~IiHRDiKp~NILl~~~g--------------------~vKl~DFGla~~~~~~~~~~~~~~GTp~YmAPEvl~  320 (423)
T 4fie_A          262 VLHA-QGVIHRDIKSDSILLTHDG--------------------RVKLSDFGFCAQVSKEVPRRKSLVGTPYWMAPELIS  320 (423)
T ss_dssp             HHHH-TTEECCCCSTTTEEECTTC--------------------CEEECCCTTCEECCSSCCCBCCCEECTTTCCHHHHT
T ss_pred             HHHH-CCeecccCCHHHEEEcCCC--------------------CEEEecCccceECCCCCccccccccCcCcCCHHHHC
Confidence            9999 7999999999999999887                    799999999998754     3568899999999998


Q ss_pred             CC-CCcHHHHHHHhhcccCCCCCCCCCCChhhhHHHHHHHHhhcccCCCCCCCchhHHHHHHHHHHHhcCCCcCcCCC
Q psy9184         486 GE-GDYQFDMYRMMRKQCQNNWQNFTPKNNVFWIHYLVDKATCLKKGYQYLRAPRHQAFELLEELGQNALHFDSCYEM  562 (562)
Q Consensus       486 g~-~~~q~dIy~lm~~~~~~~W~~~~P~tn~~wl~yl~~~Ll~~~~~~~~~~~~~~~~~~~l~~l~~~~l~~~s~~~~  562 (562)
                      +. ++...|||++ |..+..+..+..||.+...+..+ ..... ...+.-.  .....-..+..|...||+.+...|+
T Consensus       321 ~~~y~~~~DiWSl-Gvilyeml~G~~PF~~~~~~~~~-~~i~~-~~~~~~~--~~~~~s~~~~dli~~~L~~dP~~R~  393 (423)
T 4fie_A          321 RLPYGPEVDIWSL-GIMVIEMVDGEPPYFNEPPLKAM-KMIRD-NLPPRLK--NLHKVSPSLKGFLDRLLVRDPAQRA  393 (423)
T ss_dssp             TCCBCTHHHHHHH-HHHHHHHHHSSCTTTTSCHHHHH-HHHHH-SCCCCCS--CTTSSCHHHHHHHHHHSCSSTTTSC
T ss_pred             CCCCCcHHHHHHH-HHHHHHHHHCCCCCCCcCHHHHH-HHHHc-CCCCCCc--ccccCCHHHHHHHHHHcCCChhHCc
Confidence            74 6777999875 44444555666777543322222 22222 1111111  1112234677889999999887764

>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}

Probab=100.00  E-value=1.1e-36  Score=312.03  Aligned_cols=234  Identities=15%  Similarity=0.114  Sum_probs=177.8

Q ss_pred             CCC-ceeeeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCcccc
Q psy9184         261 SAL-KNCKKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTE  333 (562)
Q Consensus       261 ~~y-~~~~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~  333 (562)
                      ++| ++.++||+|+||.||+|      ..||+|++....      ......+.+.+|+.+|+.|+|              
T Consensus        25 gr~~~~~~~iG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~------~~~~~~~~~~~E~~il~~l~H--------------   84 (290)
T 3fpq_A           25 GRFLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRK------LTKSERQRFKEEAEMLKGLQH--------------   84 (290)
T ss_dssp             SSEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGG------SCHHHHHHHHHHHHHHHTCCC--------------
T ss_pred             CceEEeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhh------CCHHHHHHHHHHHHHHHhCCC--------------
Confidence            444 67788999999999999      789999998653      223445788999999999998              


Q ss_pred             cccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc---cCCHHHHHHHHHHHHHHHH
Q psy9184         334 LLKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK---YRSPNQTYAMILQVVFSLA  410 (562)
Q Consensus       334 l~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~---~l~e~~i~~I~~QIl~aL~  410 (562)
                                  ||||+++++|.+..         ..++.+|||||||+||+|.+.+.   .+++.+++.|+.||+.||+
T Consensus        85 ------------pnIV~~~~~~~~~~---------~~~~~~~lvmEy~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~  143 (290)
T 3fpq_A           85 ------------PNIVRFYDSWESTV---------KGKKCIVLVTELMTSGTLKTYLKRFKVMKIKVLRSWCRQILKGLQ  143 (290)
T ss_dssp             ------------TTBCCEEEEEEEEE---------TTEEEEEEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHH
T ss_pred             ------------CCCCcEEEEEeecc---------CCCcEEEEEEeCCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHH
Confidence                        99999999987521         11346899999999998877764   4899999999999999999


Q ss_pred             HHHhhCC--eEeccCCCCCEEEcc-CCCCCcccccCCcccccccCCceEEEEeccceeeecC---CcEEEeecCCCcccc
Q psy9184         411 VAEVELE--FEHRDLHMSNILVLQ-TDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVG---EKICYYDLSQDEELF  484 (562)
Q Consensus       411 yLH~~~~--IiHRDLKpeNILl~~-~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~---~g~v~~~l~~~pelF  484 (562)
                      |||+ ++  ||||||||+||||+. ++                    .+||+|||+|+....   ...++|+.|++||++
T Consensus       144 ylH~-~~~~IiHRDlKp~NILl~~~~g--------------------~vKl~DFGla~~~~~~~~~~~~GTp~YmAPE~~  202 (290)
T 3fpq_A          144 FLHT-RTPPIIHRDLKCDNIFITGPTG--------------------SVKIGDLGLATLKRASFAKAVIGTPEFMAPEMY  202 (290)
T ss_dssp             HHHT-SSSCCCCCCCCGGGEEESSTTS--------------------CEEECCTTGGGGCCTTSBEESCSSCCCCCGGGG
T ss_pred             HHHH-CCCCEEecccChhheeEECCCC--------------------CEEEEeCcCCEeCCCCccCCcccCccccCHHHc
Confidence            9999 68  999999999999985 44                    799999999986543   234679999999999


Q ss_pred             CCCCCcHHHHHHHhhcccCCCCCCCCCCChhhhHHHHHHHHhhcccCCCCCCCchhHHHHHHHHHHHhcCCCcCcCC
Q psy9184         485 EGEGDYQFDMYRMMRKQCQNNWQNFTPKNNVFWIHYLVDKATCLKKGYQYLRAPRHQAFELLEELGQNALHFDSCYE  561 (562)
Q Consensus       485 ~g~~~~q~dIy~lm~~~~~~~W~~~~P~tn~~wl~yl~~~Ll~~~~~~~~~~~~~~~~~~~l~~l~~~~l~~~s~~~  561 (562)
                      .+.++..+|||++.- .+.....+..|+.+......+...+.. +..+....   ......+++|..++|..+...|
T Consensus       203 ~~~y~~~~DiwSlGv-ilyelltg~~Pf~~~~~~~~~~~~i~~-~~~~~~~~---~~~~~~~~~li~~~L~~dP~~R  274 (290)
T 3fpq_A          203 EEKYDESVDVYAFGM-CMLEMATSEYPYSECQNAAQIYRRVTS-GVKPASFD---KVAIPEVKEIIEGCIRQNKDER  274 (290)
T ss_dssp             GTCCCTHHHHHHHHH-HHHHHHHSSCTTTTCSSHHHHHHHHTT-TCCCGGGG---GCCCHHHHHHHHHHSCSSGGGS
T ss_pred             CCCCCcHHHHHHHHH-HHHHHHHCCCCCCCCCcHHHHHHHHHc-CCCCCCCC---ccCCHHHHHHHHHHccCChhHC
Confidence            998888899998543 333445566666543333344444444 22111110   0113467888999999887765

>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*

Probab=100.00  E-value=4.6e-37  Score=316.85  Aligned_cols=228  Identities=16%  Similarity=0.164  Sum_probs=169.8

Q ss_pred             CCCceeeeeeccCceEEEEE---------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCcc
Q psy9184         261 SALKNCKKIGEGVYGEVFKL---------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCF  331 (562)
Q Consensus       261 ~~y~~~~~LG~GsfG~Vyka---------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~f  331 (562)
                      ++|++++.||+|+||+||+|         +.||||+++....      .......+.+|+.+|+.++|            
T Consensus        24 ~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~------~~~~~~~~~~E~~il~~l~H------------   85 (304)
T 3ubd_A           24 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATL------KVRDRVRTKMERDILVEVNH------------   85 (304)
T ss_dssp             GGEEEEEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEE------EEEECC------CCCCCCCC------------
T ss_pred             cccEEEEEEecCCCeEEEEEEEccCCCCCEEEEEEEEehHHc------ChHHHHHHHHHHHHHHHCCC------------
Confidence            57999999999999999999         4699999986431      11112357789999999998            


Q ss_pred             cccccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc---cCCHHHHHHHHHHHHHH
Q psy9184         332 TELLKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK---YRSPNQTYAMILQVVFS  408 (562)
Q Consensus       332 v~l~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~---~l~e~~i~~I~~QIl~a  408 (562)
                                    ||||+++++|.+             ++.+|||||||+||+|.+.+.   .+++.+++.++.||+.|
T Consensus        86 --------------pnIv~l~~~~~~-------------~~~~~ivmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~a  138 (304)
T 3ubd_A           86 --------------PFIVKLHYAFQT-------------EGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALA  138 (304)
T ss_dssp             --------------TTEECEEEEEEE-------------TTEEEEEECCCTTCEEHHHHHHHCCCCHHHHHHHHHHHHHH
T ss_pred             --------------CCCCeEEEEEEE-------------CCEEEEEEEcCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHH
Confidence                          999999999986             568999999999999887774   49999999999999999


Q ss_pred             HHHHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecC-----CcEEEeecCCCccc
Q psy9184         409 LAVAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVG-----EKICYYDLSQDEEL  483 (562)
Q Consensus       409 L~yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~-----~g~v~~~l~~~pel  483 (562)
                      |+|||+ +||+||||||+|||++.++                    .+||+|||+|+....     .+.++|..|++||+
T Consensus       139 L~ylH~-~~IiHRDlKp~NILl~~~g--------------------~vKl~DFGla~~~~~~~~~~~~~~GT~~YmAPE~  197 (304)
T 3ubd_A          139 LDHLHS-LGIIYRDLKPENILLDEEG--------------------HIKLTDFGLSKESIDHEKKAYSFCGTVEYMAPEV  197 (304)
T ss_dssp             HHHHHH-TTCCCSSCCGGGEEECTTS--------------------CEEEESSEEEEC-----CCCCSCCCCGGGCCHHH
T ss_pred             HHHHHH-CCCcCCCCCHHHeEEcCCC--------------------CEEecccccceeccCCCccccccccCcccCCHHH
Confidence            999999 7999999999999999887                    799999999987543     34568999999999


Q ss_pred             cCCC-CCcHHHHHHHhhcccCCCCCCCCCCChhhhHHHHHHHHhhcccCCCCCCCchhHHHHHHHHHHHhcCCCcCcCCC
Q psy9184         484 FEGE-GDYQFDMYRMMRKQCQNNWQNFTPKNNVFWIHYLVDKATCLKKGYQYLRAPRHQAFELLEELGQNALHFDSCYEM  562 (562)
Q Consensus       484 F~g~-~~~q~dIy~lm~~~~~~~W~~~~P~tn~~wl~yl~~~Ll~~~~~~~~~~~~~~~~~~~l~~l~~~~l~~~s~~~~  562 (562)
                      +.+. ++..+|||++ |..+..+..+..||...-.. -+....+.....++..-      -..+.+|..++|+.+...|+
T Consensus       198 ~~~~~y~~~~DiwSl-GvilyemltG~~PF~~~~~~-~~~~~i~~~~~~~p~~~------s~~~~~li~~~L~~dP~~R~  269 (304)
T 3ubd_A          198 VNRRGHTQSADWWSF-GVLMFEMLTGTLPFQGKDRK-ETMTMILKAKLGMPQFL------SPEAQSLLRMLFKRNPANRL  269 (304)
T ss_dssp             HHTSCCCTHHHHHHH-HHHHHHHHHSSCSSCCSSHH-HHHHHHHHCCCCCCTTS------CHHHHHHHHHHTCSSGGGST
T ss_pred             hccCCCCCCCcccch-HHHHHHHHhCCCCCCCcCHH-HHHHHHHcCCCCCCCcC------CHHHHHHHHHHcccCHHHCC
Confidence            9874 6777999885 44444455566666433212 22333333233333221      23567788899988877653

>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}

Probab=100.00  E-value=6.3e-36  Score=308.79  Aligned_cols=173  Identities=19%  Similarity=0.246  Sum_probs=144.9

Q ss_pred             CCCCCceeeeeeccCceEEEEE---eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCcccccc
Q psy9184         259 PSSALKNCKKIGEGVYGEVFKL---NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTELL  335 (562)
Q Consensus       259 ~~~~y~~~~~LG~GsfG~Vyka---~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~l~  335 (562)
                      +.+++++.++||+|+||+||+|   ..||||+++...      ......+.+.+|+.+|++++|                
T Consensus        34 ~~~~l~l~~~iG~G~fG~Vy~~~~~~~vAvK~~~~~~------~~~~~~~~f~~E~~il~~l~H----------------   91 (307)
T 3omv_A           34 EASEVMLSTRIGSGSFGTVYKGKWHGDVAVKILKVVD------PTPEQFQAFRNEVAVLRKTRH----------------   91 (307)
T ss_dssp             CTTSCCEEEECCCCSSSEEEEEESSSEEEEEECCCSS------CCHHHHHHHHHHHHHHTTCCC----------------
T ss_pred             cHHHeEEeeEEeeCCCcEEEEEEECCcEEEEEEEecC------CCHHHHHHHHHHHHHHHhCCC----------------
Confidence            4477899999999999999999   789999997643      234456789999999999998                


Q ss_pred             cccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc----cCCHHHHHHHHHHHHHHHHH
Q psy9184         336 KCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK----YRSPNQTYAMILQVVFSLAV  411 (562)
Q Consensus       336 ~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~----~l~e~~i~~I~~QIl~aL~y  411 (562)
                                ||||++++++.              ++.+|||||||+||+|.+.+.    .+++.++..|+.||+.||+|
T Consensus        92 ----------pNIV~l~g~~~--------------~~~~~iVmEy~~gGsL~~~l~~~~~~l~~~~~~~i~~qia~gL~y  147 (307)
T 3omv_A           92 ----------VNILLFMGYMT--------------KDNLAIVTQWCEGSSLYKHLHVQETKFQMFQLIDIARQTAQGMDY  147 (307)
T ss_dssp             ----------TTBCCEEEEEC--------------SSSCEEEEECCSSCBHHHHHHTSCCCCCHHHHHHHHHHHHHHHHH
T ss_pred             ----------CCEeeEEEEEE--------------CCeEEEEEEcCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHH
Confidence                      99999998764              346899999999999887763    48999999999999999999


Q ss_pred             HHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecC-------CcEEEeecCCCcccc
Q psy9184         412 AEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVG-------EKICYYDLSQDEELF  484 (562)
Q Consensus       412 LH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~-------~g~v~~~l~~~pelF  484 (562)
                      ||+ .+||||||||+||||+.++                    .+||+|||+|+....       ...+++..|++||++
T Consensus       148 LH~-~~IiHRDlKp~NILl~~~~--------------------~~Ki~DFGla~~~~~~~~~~~~~~~~GT~~ymAPE~l  206 (307)
T 3omv_A          148 LHA-KNIIHRDMKSNNIFLHEGL--------------------TVKIGDFGLATVKSRWSGSQQVEQPTGSVLWMAPEVI  206 (307)
T ss_dssp             HHH-TTCBCSCCCSSSEEEETTE--------------------EEEECCCSSCBC------------CCCCTTSCCHHHH
T ss_pred             HHH-CCccCCccCHHHEEECCCC--------------------cEEEeeccCceecccCCcceeecccccCCCccCHHHh
Confidence            999 7999999999999999886                    899999999987543       234578899999998


Q ss_pred             CCC----CCcHHHHHHHh
Q psy9184         485 EGE----GDYQFDMYRMM  498 (562)
Q Consensus       485 ~g~----~~~q~dIy~lm  498 (562)
                      .+.    ++.++|||+..
T Consensus       207 ~~~~~~~y~~ksDVwS~G  224 (307)
T 3omv_A          207 RMQDNNPFSFQSDVYSYG  224 (307)
T ss_dssp             HCCSSCCCCHHHHHHHHH
T ss_pred             hccCCCCCCcHHHhHhHH
Confidence            642    46679999853

>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*

Probab=100.00  E-value=2.2e-36  Score=315.71  Aligned_cols=166  Identities=20%  Similarity=0.296  Sum_probs=143.5

Q ss_pred             CCCceeeeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCccccc
Q psy9184         261 SALKNCKKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTEL  334 (562)
Q Consensus       261 ~~y~~~~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~l  334 (562)
                      +.|++.++||+|+||+||+|      +.||||+++....             ..+|+.+|+.|+|               
T Consensus        58 ~~~~~~~~lG~G~fG~Vy~a~~~~~g~~vAiK~i~~~~~-------------~~~E~~il~~l~H---------------  109 (336)
T 4g3f_A           58 HWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVF-------------RVEELVACAGLSS---------------  109 (336)
T ss_dssp             TEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTC-------------CTHHHHTTTTCCC---------------
T ss_pred             hheEeCcEeccCCCeEEEEEEECCCCCEEEEEEECHHHh-------------HHHHHHHHHhCCC---------------
Confidence            56889999999999999999      7899999986531             2469999999998               


Q ss_pred             ccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc---cCCHHHHHHHHHHHHHHHHH
Q psy9184         335 LKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK---YRSPNQTYAMILQVVFSLAV  411 (562)
Q Consensus       335 ~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~---~l~e~~i~~I~~QIl~aL~y  411 (562)
                                 ||||+++++|.+             ++.+|||||||+||+|.+.+.   .+++.+++.|+.||+.||+|
T Consensus       110 -----------pnIV~l~~~~~~-------------~~~~~ivmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~aL~y  165 (336)
T 4g3f_A          110 -----------PRIVPLYGAVRE-------------GPWVNIFMELLEGGSLGQLIKQMGCLPEDRALYYLGQALEGLEY  165 (336)
T ss_dssp             -----------TTBCCEEEEEEE-------------TTEEEEEECCCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHH
T ss_pred             -----------CCCCcEEEEEEE-------------CCEEEEEEeccCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHH
Confidence                       999999999986             568999999999999887774   49999999999999999999


Q ss_pred             HHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecCC----------cEEEeecCCCc
Q psy9184         412 AEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVGE----------KICYYDLSQDE  481 (562)
Q Consensus       412 LH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~~----------g~v~~~l~~~p  481 (562)
                      ||+ +|||||||||+||||+.++.                   .+||+|||+|+.....          ..++|+.|++|
T Consensus       166 lH~-~~IiHRDlKp~NILl~~~g~-------------------~vKl~DFGla~~~~~~~~~~~~~~~~~~~GT~~YmAP  225 (336)
T 4g3f_A          166 LHT-RRILHGDVKADNVLLSSDGS-------------------RAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAP  225 (336)
T ss_dssp             HHT-TTEECSCCCGGGEEECTTSC-------------------CEEECCCTTCEEC------------CCCCCCGGGCCH
T ss_pred             HHH-CCceecccCHHHEEEeCCCC-------------------EEEEeeCCCCeEccCCCcccceecCCccccCccccCH
Confidence            999 79999999999999998762                   6999999999986542          23579999999


Q ss_pred             cccCCC-CCcHHHHHHHh
Q psy9184         482 ELFEGE-GDYQFDMYRMM  498 (562)
Q Consensus       482 elF~g~-~~~q~dIy~lm  498 (562)
                      |++.+. ++...|||++.
T Consensus       226 E~~~~~~y~~~~DiwSlG  243 (336)
T 4g3f_A          226 EVVMGKPCDAKVDIWSSC  243 (336)
T ss_dssp             HHHTTCCCCTHHHHHHHH
T ss_pred             HHHCCCCCCcHHHHHHHH
Confidence            999884 67779998853

>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*

Probab=100.00  E-value=3.6e-35  Score=301.97  Aligned_cols=172  Identities=17%  Similarity=0.211  Sum_probs=145.8

Q ss_pred             CCCCCCceeeeeeccCceEEEEE-----------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCC
Q psy9184         258 YPSSALKNCKKIGEGVYGEVFKL-----------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTEN  326 (562)
Q Consensus       258 ~~~~~y~~~~~LG~GsfG~Vyka-----------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n  326 (562)
                      +..++|.+.++||+|+||+||+|           ..||||+++...        ....+++.+|+.+|++|+|       
T Consensus        10 I~r~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~--------~~~~~~f~~E~~il~~l~H-------   74 (299)
T 4asz_A           10 IKRHNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDAS--------DNARKDFHREAELLTNLQH-------   74 (299)
T ss_dssp             CCGGGEEEEEEEEC--CCCEEEEEECSCC----CEEEEEEEECSCC--------HHHHHHHHHHHHHHTTCCC-------
T ss_pred             cCHHHeEEeeEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCCCC--------hHHHHHHHHHHHHHHhCCC-------
Confidence            44567899999999999999999           369999997542        3445789999999999998       


Q ss_pred             CCCcccccccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc---------------
Q psy9184         327 STPCFTELLKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK---------------  391 (562)
Q Consensus       327 ~~p~fv~l~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~---------------  391 (562)
                                         ||||++++++.+             ++.+|||||||+||+|.+.+.               
T Consensus        75 -------------------pnIV~l~g~~~~-------------~~~~~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~  122 (299)
T 4asz_A           75 -------------------EHIVKFYGVCVE-------------GDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPP  122 (299)
T ss_dssp             -------------------TTBCCEEEEECS-------------SSSEEEEEECCTTCBHHHHHHHTSHHHHHC----CC
T ss_pred             -------------------CCCccEEEEEee-------------CCEEEEEEEcCCCCcHHHHHHhcCcccccccccCCC
Confidence                               999999999875             558999999999999877663               


Q ss_pred             -cCCHHHHHHHHHHHHHHHHHHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecC-
Q psy9184         392 -YRSPNQTYAMILQVVFSLAVAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVG-  469 (562)
Q Consensus       392 -~l~e~~i~~I~~QIl~aL~yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~-  469 (562)
                       .+++.++..|+.||+.||.|||+ .+||||||||+|||++.++                    .+||+|||+|+.... 
T Consensus       123 ~~l~~~~~~~i~~qia~gl~yLH~-~~iiHRDlKp~NILl~~~~--------------------~~Ki~DFGla~~~~~~  181 (299)
T 4asz_A          123 TELTQSQMLHIAQQIAAGMVYLAS-QHFVHRDLATRNCLVGENL--------------------LVKIGDFGMSRDVYST  181 (299)
T ss_dssp             CCCCHHHHHHHHHHHHHHHHHHHH-TTCCCSCCSGGGEEECGGG--------------------CEEECCCSCHHHHTGG
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHh-CCcccCccCHhhEEECCCC--------------------cEEECCcccceecCCC
Confidence             38999999999999999999999 7999999999999999886                    799999999986543 


Q ss_pred             ------CcEEEeecCCCccccCC-CCCcHHHHHHH
Q psy9184         470 ------EKICYYDLSQDEELFEG-EGDYQFDMYRM  497 (562)
Q Consensus       470 ------~g~v~~~l~~~pelF~g-~~~~q~dIy~l  497 (562)
                            ....++..|++||++.+ .++.++|||+.
T Consensus       182 ~~~~~~~~~~gt~~ymAPE~~~~~~~~~k~DVwS~  216 (299)
T 4asz_A          182 DYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSL  216 (299)
T ss_dssp             GCEEETTTEEECGGGCCHHHHHHCCCCHHHHHHHH
T ss_pred             CceeecCceecChhhcCHHHHcCCCCCchhhHHHH
Confidence                  34567888999998876 56777999885

>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*

Probab=100.00  E-value=7.6e-35  Score=299.46  Aligned_cols=236  Identities=15%  Similarity=0.150  Sum_probs=162.0

Q ss_pred             CCceeeeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCcccccc
Q psy9184         262 ALKNCKKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTELL  335 (562)
Q Consensus       262 ~y~~~~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~l~  335 (562)
                      +|++++.||+|+||+||+|      +.||||++....       .....+.+.+|+.+|+.|+|                
T Consensus         6 dy~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~-------~~~~~~~~~~E~~il~~l~H----------------   62 (299)
T 4g31_A            6 DFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPN-------RELAREKVMREVKALAKLEH----------------   62 (299)
T ss_dssp             HEEEEEEEEECC--EEEEEEETTTCCEEEEEEEEECS-------SHHHHHHHHHHHHHHTTCCC----------------
T ss_pred             hCEEeeEEecCCCeEEEEEEECCCCCEEEEEEEeccC-------CHHHHHHHHHHHHHHHhCCC----------------
Confidence            5899999999999999999      799999998653       23445678999999999998                


Q ss_pred             cccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCcccccc------CCHHHHHHHHHHHHHHH
Q psy9184         336 KCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIKY------RSPNQTYAMILQVVFSL  409 (562)
Q Consensus       336 ~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~~------l~e~~i~~I~~QIl~aL  409 (562)
                                ||||+++++|.+....+...+ ......+|+|||||.||++.+.+..      .++..++.|+.||+.||
T Consensus        63 ----------pnIV~~~~~~~~~~~~~~~~~-~~~~~~l~ivmE~~~gg~L~~~l~~~~~~~~~~~~~~~~i~~qi~~al  131 (299)
T 4g31_A           63 ----------PGIVRYFNAWLEKNTTEKLQP-SSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIAEAV  131 (299)
T ss_dssp             ----------TTBCCEEEEEEEEC-----------CEEEEEEEECCCSCCHHHHHHTCCSGGGSCHHHHHHHHHHHHHHH
T ss_pred             ----------CCCCeEEEEEEecCccccccc-cCCCcEEEEEEecCCCCcHHHHHHhcCCCChhHHHHHHHHHHHHHHHH
Confidence                      999999988875432111100 0123468999999999988776642      45667899999999999


Q ss_pred             HHHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecC-----------------CcE
Q psy9184         410 AVAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVG-----------------EKI  472 (562)
Q Consensus       410 ~yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~-----------------~g~  472 (562)
                      +|||+ .||+||||||+|||++.++                    .+||+|||+|+....                 .+.
T Consensus       132 ~ylH~-~~IiHRDlKp~NILl~~~~--------------------~vKl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~  190 (299)
T 4g31_A          132 EFLHS-KGLMHRDLKPSNIFFTMDD--------------------VVKVGDFGLVTAMDQDEEEQTVLTPMPAYARHTGQ  190 (299)
T ss_dssp             HHHHH-TTCCCCCCCGGGEEECTTC--------------------CEEECCCCCC-------------------------
T ss_pred             HHHHH-CcCccccCcHHHeEECCCC--------------------cEEEccCccceecCCCccccccccccccccccCCc
Confidence            99999 7999999999999999887                    799999999987653                 234


Q ss_pred             EEeecCCCccccCC-CCCcHHHHHHHhhcccCCCCCCCCCCChhhhHHHHHHHHhhcccCCCCCCCchhHHHHHHHHHHH
Q psy9184         473 CYYDLSQDEELFEG-EGDYQFDMYRMMRKQCQNNWQNFTPKNNVFWIHYLVDKATCLKKGYQYLRAPRHQAFELLEELGQ  551 (562)
Q Consensus       473 v~~~l~~~pelF~g-~~~~q~dIy~lm~~~~~~~W~~~~P~tn~~wl~yl~~~Ll~~~~~~~~~~~~~~~~~~~l~~l~~  551 (562)
                      ++|+.|++||++.+ .++.+.|||++.-... ...   .|+...............  ..++.   ........+..|..
T Consensus       191 ~GT~~YmAPE~~~~~~y~~~~DiwSlGvily-ell---~Pf~~~~~~~~~~~~~~~--~~~p~---~~~~~~~~~~~li~  261 (299)
T 4g31_A          191 VGTKLYMSPEQIHGNSYSHKVDIFSLGLILF-ELL---YPFSTQMERVRTLTDVRN--LKFPP---LFTQKYPCEYVMVQ  261 (299)
T ss_dssp             -CCCTTSCHHHHTTCCCCTHHHHHHHHHHHH-HHH---SCCSSHHHHHHHHHHHHT--TCCCH---HHHHHCHHHHHHHH
T ss_pred             ccCccccCHHHHcCCCCCCHHHHHHHHHHHH-HHc---cCCCCccHHHHHHHHHhc--CCCCC---CCcccCHHHHHHHH
Confidence            68999999999988 4677799988644433 222   255433211111222222  22221   11122334566888


Q ss_pred             hcCCCcCcCC
Q psy9184         552 NALHFDSCYE  561 (562)
Q Consensus       552 ~~l~~~s~~~  561 (562)
                      .||+.+...|
T Consensus       262 ~~L~~dP~~R  271 (299)
T 4g31_A          262 DMLSPSPMER  271 (299)
T ss_dssp             HHTCSSGGGS
T ss_pred             HHcCCChhHC
Confidence            8898887665

>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}

Probab=100.00  E-value=2e-34  Score=300.30  Aligned_cols=170  Identities=19%  Similarity=0.177  Sum_probs=139.6

Q ss_pred             CCCceeeeeeccCceEEEEE-----------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCC
Q psy9184         261 SALKNCKKIGEGVYGEVFKL-----------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTP  329 (562)
Q Consensus       261 ~~y~~~~~LG~GsfG~Vyka-----------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p  329 (562)
                      .+|.+.++||+|+||+||+|           ..||||+++...        ....+.+.+|+.+|++|+|          
T Consensus        41 ~d~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~--------~~~~~~f~~E~~il~~l~H----------  102 (329)
T 4aoj_A           41 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEAS--------ESARQDFQREAELLTMLQH----------  102 (329)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEESSSCC---CEEEEEEEESCCS--------HHHHHHHHHHHHHHTTCCC----------
T ss_pred             HHeEEEEEEccCCCcEEEEEEECCcccCCCCeEEEEEEECcCC--------HHHHHHHHHHHHHHHhCCC----------
Confidence            56788999999999999998           469999997542        3445789999999999998          


Q ss_pred             cccccccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc------------------
Q psy9184         330 CFTELLKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK------------------  391 (562)
Q Consensus       330 ~fv~l~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~------------------  391 (562)
                                      ||||++++++.+             ++.+|||||||+||+|.+.+.                  
T Consensus       103 ----------------pnIV~l~g~~~~-------------~~~~~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~~  153 (329)
T 4aoj_A          103 ----------------QHIVRFFGVCTE-------------GRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPG  153 (329)
T ss_dssp             ----------------TTBCCEEEEECS-------------SSSEEEEEECCTTCBHHHHHHTSSCC-----------CC
T ss_pred             ----------------CCCCcEEEEEEE-------------CCEEEEEEEcCCCCcHHHHHHhcCcccccccccccccCC
Confidence                            999999999875             558999999999998876542                  


Q ss_pred             cCCHHHHHHHHHHHHHHHHHHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecC--
Q psy9184         392 YRSPNQTYAMILQVVFSLAVAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVG--  469 (562)
Q Consensus       392 ~l~e~~i~~I~~QIl~aL~yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~--  469 (562)
                      .+++.++..|+.||+.||+|||+ .+||||||||+||||+.++                    .+||+|||+|+....  
T Consensus       154 ~l~~~~~~~i~~qia~gl~yLH~-~~iiHRDLKp~NILl~~~~--------------------~~Ki~DFGla~~~~~~~  212 (329)
T 4aoj_A          154 PLGLGQLLAVASQVAAGMVYLAG-LHFVHRDLATRNCLVGQGL--------------------VVKIGDFGMSRDIYSTD  212 (329)
T ss_dssp             SCCHHHHHHHHHHHHHHHHHHHH-TTCCCSCCCGGGEEEETTT--------------------EEEECCCC---------
T ss_pred             CCCHHHHHHHHHHHHHHHHHHhc-CCeecccccHhhEEECCCC--------------------cEEEcccccceeccCCC
Confidence            38899999999999999999999 7999999999999999886                    899999999997643  


Q ss_pred             -----CcEEEeecCCCccccCC-CCCcHHHHHHHh
Q psy9184         470 -----EKICYYDLSQDEELFEG-EGDYQFDMYRMM  498 (562)
Q Consensus       470 -----~g~v~~~l~~~pelF~g-~~~~q~dIy~lm  498 (562)
                           ....++..|++||++.+ .++.++|||+..
T Consensus       213 ~~~~~~~~~gt~~ymAPE~~~~~~~~~~sDvwS~G  247 (329)
T 4aoj_A          213 YYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFG  247 (329)
T ss_dssp             -------CCCCGGGCCHHHHTTCCCCHHHHHHHHH
T ss_pred             cceecCcccccccccChhhhcCCCCCccccccchH
Confidence                 23446778999999887 467779998853

>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*

Probab=100.00  E-value=1.7e-34  Score=303.56  Aligned_cols=176  Identities=21%  Similarity=0.274  Sum_probs=148.9

Q ss_pred             CCCCCCceeeeeeccCceEEEEE-----------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCC
Q psy9184         258 YPSSALKNCKKIGEGVYGEVFKL-----------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTEN  326 (562)
Q Consensus       258 ~~~~~y~~~~~LG~GsfG~Vyka-----------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n  326 (562)
                      ++.++|++.++||+|+||+||+|           +.||||++....       .....+.+.+|+.+|+++.|       
T Consensus        61 i~~~~~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~~-------~~~~~~~~~~E~~il~~l~h-------  126 (353)
T 4ase_A           61 FPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGA-------THSEHRALMSELKILIHIGH-------  126 (353)
T ss_dssp             CCGGGEEEEEEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTTC-------CHHHHHHHHHHHHHHHHHCC-------
T ss_pred             ecHHHeEEeeEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEcccc-------ChHHHHHHHHHHHHHHHcCC-------
Confidence            45678999999999999999999           479999998643       23445678999999999998       


Q ss_pred             CCCcccccccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc---------------
Q psy9184         327 STPCFTELLKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK---------------  391 (562)
Q Consensus       327 ~~p~fv~l~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~---------------  391 (562)
                                        |||||++++++..            .++.+|||||||++|+|.+.+.               
T Consensus       127 ------------------hpnIV~l~g~~~~------------~~~~~~iV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~  176 (353)
T 4ase_A          127 ------------------HLNVVNLLGACTK------------PGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPED  176 (353)
T ss_dssp             ------------------CTTBCCEEEEECC------------TTSCCEEEEECCTTEEHHHHHHHTGGGBCCC------
T ss_pred             ------------------CCcEEEEEEEEEe------------cCCEEEEEEEcCCCCCHHHHHHhcccccccccccchh
Confidence                              7999999998854            1346899999999998877653               


Q ss_pred             ----cCCHHHHHHHHHHHHHHHHHHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeee
Q psy9184         392 ----YRSPNQTYAMILQVVFSLAVAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCF  467 (562)
Q Consensus       392 ----~l~e~~i~~I~~QIl~aL~yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~  467 (562)
                          .+++.++..++.||+.||+|||+ .+||||||||+|||++.++                    .+||+|||+|+..
T Consensus       177 ~~~~~l~~~~~~~~~~qia~gl~yLH~-~~iiHRDLK~~NILl~~~~--------------------~vKi~DFGlar~~  235 (353)
T 4ase_A          177 LYKDFLTLEHLICYSFQVAKGMEFLAS-RKCIHRDLAARNILLSEKN--------------------VVKICDFGLARDI  235 (353)
T ss_dssp             -CTTCBCHHHHHHHHHHHHHHHHHHHH-TTCCCSCCSGGGEEECGGG--------------------CEEECCCGGGSCT
T ss_pred             hccccCCHHHHHHHHHHHHHHHHhHhh-CCeecCccCccceeeCCCC--------------------CEEECcchhhhhc
Confidence                27899999999999999999999 7999999999999999886                    7999999999976


Q ss_pred             cC-------CcEEEeecCCCccccCC-CCCcHHHHHHHh
Q psy9184         468 VG-------EKICYYDLSQDEELFEG-EGDYQFDMYRMM  498 (562)
Q Consensus       468 ~~-------~g~v~~~l~~~pelF~g-~~~~q~dIy~lm  498 (562)
                      ..       ....++..|++||++.+ .++.++|||+..
T Consensus       236 ~~~~~~~~~~~~~gt~~ymAPE~l~~~~y~~ksDVwS~G  274 (353)
T 4ase_A          236 YKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFG  274 (353)
T ss_dssp             TTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHH
T ss_pred             ccCCCceeeccccccccccCHHHHhcCCCCCcccEeehH
Confidence            43       34567888999998765 567779998853

>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*

Probab=100.00  E-value=2.6e-33  Score=295.33  Aligned_cols=183  Identities=16%  Similarity=0.141  Sum_probs=150.6

Q ss_pred             CCCceeeeeeccCceEEEEE---------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCcc
Q psy9184         261 SALKNCKKIGEGVYGEVFKL---------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCF  331 (562)
Q Consensus       261 ~~y~~~~~LG~GsfG~Vyka---------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~f  331 (562)
                      ++|++.++||+|+||+||+|         +.||+|++....          ....+.+|+.+|+.+.+            
T Consensus        21 ~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~----------~~~~~~~E~~~l~~~~~------------   78 (361)
T 4f9c_A           21 NVFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTS----------HPIRIAAELQCLTVAGG------------   78 (361)
T ss_dssp             GTCEEEEEEEECSSEEEEEEEEEBTTSCEEEEEEEEECTTS----------CHHHHHHHHHHHHHTCS------------
T ss_pred             CcEEEEEEEecccCcEEEEEEEcccCCCCCEEEEEEEcccc----------CHHHHHHHHHHHHHhcC------------
Confidence            67999999999999999999         579999987542          12457899999999965            


Q ss_pred             cccccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccccCCHHHHHHHHHHHHHHHHH
Q psy9184         332 TELLKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIKYRSPNQTYAMILQVVFSLAV  411 (562)
Q Consensus       332 v~l~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~~l~e~~i~~I~~QIl~aL~y  411 (562)
                                   ||||++++++|.+             .+.+|+|||||+||++.+.+..+++.+++.+++||+.||+|
T Consensus        79 -------------h~nIv~l~~~~~~-------------~~~~~lvmE~~~g~~L~~~~~~l~~~~~~~~~~qll~al~y  132 (361)
T 4f9c_A           79 -------------QDNVMGVKYCFRK-------------NDHVVIAMPYLEHESFLDILNSLSFQEVREYMLNLFKALKR  132 (361)
T ss_dssp             -------------BTTBCCCSEEEEE-------------TTEEEEEEECCCCCCHHHHHTTCCHHHHHHHHHHHHHHHHH
T ss_pred             -------------CCCCceEEEEEEE-------------CCEEEEEEeCCCcccHHHHHcCCCHHHHHHHHHHHHHHHHH
Confidence                         5999999999986             56999999999999998888889999999999999999999


Q ss_pred             HHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecCC---------------------
Q psy9184         412 AEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVGE---------------------  470 (562)
Q Consensus       412 LH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~~---------------------  470 (562)
                      ||+ +||+||||||+|||++.+..                   .+||+|||+|+.....                     
T Consensus       133 lH~-~gIiHRDiKPeNiLl~~~~~-------------------~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~  192 (361)
T 4f9c_A          133 IHQ-FGIVHRDVKPSNFLYNRRLK-------------------KYALVDFGLAQGTHDTKIELLKFVQSEAQQERCSQNK  192 (361)
T ss_dssp             HHH-TTEECSCCSGGGEEEETTTT-------------------EEEECCCTTCEECTTCSCGGGGGC-------------
T ss_pred             HHH-CCeEeCcCCHHHeEEeCCCC-------------------eEEECcCCCCcccCCcccccccccccccccccccccc
Confidence            999 79999999999999987632                   7999999999865431                     


Q ss_pred             ------------cEEEeecCCCccccCCC--CCcHHHHHHHhhcccCCCCCCCCCC
Q psy9184         471 ------------KICYYDLSQDEELFEGE--GDYQFDMYRMMRKQCQNNWQNFTPK  512 (562)
Q Consensus       471 ------------g~v~~~l~~~pelF~g~--~~~q~dIy~lm~~~~~~~W~~~~P~  512 (562)
                                  ..++|..|++||++.+.  ++...|||++.-.. .....+..|+
T Consensus       193 ~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~y~~~~DiWSlG~il-~ell~G~~Pf  247 (361)
T 4f9c_A          193 CSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIF-LSLLSGRYPF  247 (361)
T ss_dssp             -------------CCCCGGGCCHHHHTTCSCCCTHHHHHHHHHHH-HHHHHTCSSS
T ss_pred             ccccccccccccccccCccccCHHHHcCCCCCCCccchhhhHHHH-HHHHHCCCCC
Confidence                        12578899999998774  45668998854333 2333444444

>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A

Probab=100.00  E-value=5.3e-34  Score=294.50  Aligned_cols=228  Identities=15%  Similarity=0.104  Sum_probs=166.0

Q ss_pred             CCCCceeeeeeccCceEEEEE-----------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCC
Q psy9184         260 SSALKNCKKIGEGVYGEVFKL-----------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENST  328 (562)
Q Consensus       260 ~~~y~~~~~LG~GsfG~Vyka-----------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~  328 (562)
                      .+++++.++||+|+||+||+|           +.||||+++...       .....+.+.+|+.++++|+|         
T Consensus        25 ~~~~~~~~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~-------~~~~~~~f~~E~~il~~l~H---------   88 (308)
T 4gt4_A           25 LSAVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKA-------EGPLREEFRHEAMLRARLQH---------   88 (308)
T ss_dssp             GGGEEEEEEEEECSSCEEEEEEEC-------CEEEEEEECCC-C-------CC-CHHHHHHHHHHHHHCCC---------
T ss_pred             HHHCeEeeEeccCCCcEEEEEEEcCCccCCCCeEEEEEEECccc-------ChHHHHHHHHHHHHHHhCCC---------
Confidence            356788999999999999998           479999997543       12334678999999999998         


Q ss_pred             CcccccccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc-----------------
Q psy9184         329 PCFTELLKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK-----------------  391 (562)
Q Consensus       329 p~fv~l~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~-----------------  391 (562)
                                       ||||++++++.+             ++.+|||||||++|+|.+.+.                 
T Consensus        89 -----------------pNIV~l~g~~~~-------------~~~~~lV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~  138 (308)
T 4gt4_A           89 -----------------PNVVCLLGVVTK-------------DQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTV  138 (308)
T ss_dssp             -----------------TTBCCEEEEECS-------------SSSCEEEEECCSSCBHHHHHHTTCSSCCCC-----CCE
T ss_pred             -----------------CCCCCcceEEEE-------------CCEEEEEEEcCCCCcHHHHHHhhCcccccccccccccc
Confidence                             999999999875             457899999999998877652                 


Q ss_pred             --cCCHHHHHHHHHHHHHHHHHHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecC
Q psy9184         392 --YRSPNQTYAMILQVVFSLAVAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVG  469 (562)
Q Consensus       392 --~l~e~~i~~I~~QIl~aL~yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~  469 (562)
                        .+++.++..|+.||+.||+|||+ .+||||||||+||||+.++                    .+||+|||+|+....
T Consensus       139 ~~~l~~~~~~~i~~qia~gl~yLH~-~~iiHRDLK~~NILl~~~~--------------------~~Ki~DFGlar~~~~  197 (308)
T 4gt4_A          139 KSALEPPDFVHLVAQIAAGMEYLSS-HHVVHKDLATRNVLVYDKL--------------------NVKISDLGLFREVYA  197 (308)
T ss_dssp             ECCCCHHHHHHHHHHHHHHHHHHHH-TTCCCSCCSGGGEEECGGG--------------------CEEECCSCCBCGGGG
T ss_pred             ccCCCHHHHHHHHHHHHHHHHHHHh-CCCCCCCccccceEECCCC--------------------CEEECCcccceeccC
Confidence              38899999999999999999999 7999999999999999886                    799999999987643


Q ss_pred             -------CcEEEeecCCCccccCC-CCCcHHHHHHHhhcccCCCCC-CCCCCChhhhHHHHHHHHhhcccCCCCCCCchh
Q psy9184         470 -------EKICYYDLSQDEELFEG-EGDYQFDMYRMMRKQCQNNWQ-NFTPKNNVFWIHYLVDKATCLKKGYQYLRAPRH  540 (562)
Q Consensus       470 -------~g~v~~~l~~~pelF~g-~~~~q~dIy~lm~~~~~~~W~-~~~P~tn~~wl~yl~~~Ll~~~~~~~~~~~~~~  540 (562)
                             ....++..|++||++.+ ..+.++|||+..-.. .+.+. +..|+.... ...+...+.. +...+.+...  
T Consensus       198 ~~~~~~~~~~~gt~~ymAPE~l~~~~~s~ksDVwSfGvvl-~El~t~g~~Pf~~~~-~~~~~~~i~~-~~~~~~p~~~--  272 (308)
T 4gt4_A          198 ADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVL-WEVFSYGLQPYCGYS-NQDVVEMIRN-RQVLPCPDDC--  272 (308)
T ss_dssp             GGCBCSSSSSCBCGGGCCHHHHHHCCCCHHHHHHHHHHHH-HHHHTTTCCTTTTCC-HHHHHHHHHT-TCCCCCCTTC--
T ss_pred             CCceeEecccccCCcccCHHHHhCCCCCccchhhhHHHHH-HHHHhCCCCCCCCCC-HHHHHHHHHc-CCCCCCcccc--
Confidence                   23456778999998765 567779998853322 22232 344543322 1222333333 3322222211  


Q ss_pred             HHHHHHHHHHHhcCCCcCcCC
Q psy9184         541 QAFELLEELGQNALHFDSCYE  561 (562)
Q Consensus       541 ~~~~~l~~l~~~~l~~~s~~~  561 (562)
                        -..+.+|...++..+...|
T Consensus       273 --~~~~~~li~~C~~~dP~~R  291 (308)
T 4gt4_A          273 --PAWVYALMIECWNEFPSRR  291 (308)
T ss_dssp             --CHHHHHHHHHHTCSSGGGS
T ss_pred             --hHHHHHHHHHHcCCChhHC
Confidence              2345556666666665443

>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}

Probab=100.00  E-value=3.6e-33  Score=297.96  Aligned_cols=191  Identities=18%  Similarity=0.202  Sum_probs=152.6

Q ss_pred             CCCCceeeeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCcccc
Q psy9184         260 SSALKNCKKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTE  333 (562)
Q Consensus       260 ~~~y~~~~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~  333 (562)
                      .++|++++.||+|+||+||+|      +.||||+++...      ......+.+++|+.+|+.|+|              
T Consensus        53 ~~~Y~~~~~lG~G~fG~V~~a~~~~t~~~vAiK~i~~~~------~~~~~~~~~~~Ei~il~~l~H--------------  112 (398)
T 4b99_A           53 GDEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAF------DVVTNAKRTLRELKILKHFKH--------------  112 (398)
T ss_dssp             CSSEEEEEEEEECSSCEEEEEEETTTCCEEEEEEETTTT------SSHHHHHHHHHHHHHHHHCCC--------------
T ss_pred             CCCeEEEEEEecccCeEEEEEEECCCCCEEEEEEECccc------cchHHHHHHHHHHHHHHhcCC--------------
Confidence            367999999999999999999      899999997653      223445678899999999998              


Q ss_pred             cccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc---cCCHHHHHHHHHHHHHHHH
Q psy9184         334 LLKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK---YRSPNQTYAMILQVVFSLA  410 (562)
Q Consensus       334 l~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~---~l~e~~i~~I~~QIl~aL~  410 (562)
                                  ||||++++++....       .+...+.+|||||||. |++++.+.   .+++.+++.|++||+.||.
T Consensus       113 ------------pnIv~l~~~~~~~~-------~~~~~~~~~ivmE~~~-g~L~~~i~~~~~l~~~~~~~~~~qil~al~  172 (398)
T 4b99_A          113 ------------DNIIAIKDILRPTV-------PYGEFKSVYVVLDLME-SDLHQIIHSSQPLTLEHVRYFLYQLLRGLK  172 (398)
T ss_dssp             ------------TTBCCEEEECCCSS-------CTTTCCCEEEEEECCS-EEHHHHHTSSSCCCHHHHHHHHHHHHHHHH
T ss_pred             ------------CCcceEeeeeeccc-------ccccCCEEEEEEeCCC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHH
Confidence                        99999999886421       1123568999999997 55766664   4999999999999999999


Q ss_pred             HHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecC---------CcEEEeecCCCc
Q psy9184         411 VAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVG---------EKICYYDLSQDE  481 (562)
Q Consensus       411 yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~---------~g~v~~~l~~~p  481 (562)
                      |||+ +|||||||||+|||++.++                    .+||+|||+|+....         .+.++|..|++|
T Consensus       173 ylH~-~~iiHRDlKP~NIl~~~~~--------------------~~Ki~DFGla~~~~~~~~~~~~~~~~~~GT~~Y~AP  231 (398)
T 4b99_A          173 YMHS-AQVIHRDLKPSNLLVNENC--------------------ELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRAP  231 (398)
T ss_dssp             HHHH-TTCBCCCCCGGGEEECTTC--------------------CEEECCCTTCBCC-------CCCCCSSCCCCTTCCH
T ss_pred             HHHH-CcCcCCCcCccccccCCCC--------------------CEEEeecceeeecccCccccccccccceeChHhcCH
Confidence            9999 7999999999999999887                    799999999986532         345789999999


Q ss_pred             cccCCC--CCcHHHHHHHhhcccCCCCCCCCCC
Q psy9184         482 ELFEGE--GDYQFDMYRMMRKQCQNNWQNFTPK  512 (562)
Q Consensus       482 elF~g~--~~~q~dIy~lm~~~~~~~W~~~~P~  512 (562)
                      |++.+.  ++...|||++.- ....+..+..||
T Consensus       232 Ev~~~~~~~~~~~DiWSlG~-il~ell~G~~pF  263 (398)
T 4b99_A          232 ELMLSLHEYTQAIDLWSVGC-IFGEMLARRQLF  263 (398)
T ss_dssp             HHHTTCSCCCTHHHHHHHHH-HHHHHHHTSCSS
T ss_pred             HHhcCCCCCCChhheehhHH-HHHHHHHCCCCC
Confidence            998874  356699988543 333344444555

>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A

Probab=99.98  E-value=3.3e-33  Score=313.97  Aligned_cols=230  Identities=17%  Similarity=0.114  Sum_probs=174.3

Q ss_pred             CCCceeeeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHH---HHHHhcCCccccCCCCCCcc
Q psy9184         261 SALKNCKKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEI---MVTKETSDLQYRTENSTPCF  331 (562)
Q Consensus       261 ~~y~~~~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei---~ilk~L~h~~~~~~n~~p~f  331 (562)
                      ++|+++++||+|+||+||+|      +.||||++.+..     .........+.+|.   .+++.++|            
T Consensus       189 ddf~i~k~LG~G~fG~V~la~~~~tg~~~AiK~i~K~~-----i~~~~~~~~~~~E~~~l~ll~~~~H------------  251 (689)
T 3v5w_A          189 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKR-----IKMKQGETLALNERIMLSLVSTGDC------------  251 (689)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHH-----HHHTTCHHHHHHHHHHHHHHSSSCC------------
T ss_pred             HHeEEEEEEecccCeEEEEEEECCCCCEEEEEEEeHHH-----cchhhhHHHHHHHHHHHHHHhhCCC------------
Confidence            67999999999999999999      899999998642     11112223444554   44445555            


Q ss_pred             cccccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc---cCCHHHHHHHHHHHHHH
Q psy9184         332 TELLKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK---YRSPNQTYAMILQVVFS  408 (562)
Q Consensus       332 v~l~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~---~l~e~~i~~I~~QIl~a  408 (562)
                                    ||||+++++|++             ++.+|||||||+||+|...+.   .+++..++.|+.||+.|
T Consensus       252 --------------P~IV~l~~~f~~-------------~~~lylVmEy~~GGdL~~~l~~~~~l~E~~a~~y~~qIl~a  304 (689)
T 3v5w_A          252 --------------PFIVCMSYAFHT-------------PDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILG  304 (689)
T ss_dssp             --------------TTBCCEEEEEEC-------------SSEEEEEECCCCSCBHHHHHHHHCCCCHHHHHHHHHHHHHH
T ss_pred             --------------CCEeEEEEEEEE-------------CCEEEEEEecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHH
Confidence                          999999999986             569999999999999888774   49999999999999999


Q ss_pred             HHHHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecC---CcEEEeecCCCccccC
Q psy9184         409 LAVAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVG---EKICYYDLSQDEELFE  485 (562)
Q Consensus       409 L~yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~---~g~v~~~l~~~pelF~  485 (562)
                      |.|||+ +|||||||||+||||+.++                    ++||+|||+|+....   .+.++|+.|++||++.
T Consensus       305 L~yLH~-~gIiHRDLKPeNILld~~G--------------------~vKL~DFGlA~~~~~~~~~t~~GTp~YmAPEvl~  363 (689)
T 3v5w_A          305 LEHMHN-RFVVYRDLKPANILLDEHG--------------------HVRISDLGLACDFSKKKPHASVGTHGYMAPEVLQ  363 (689)
T ss_dssp             HHHHHT-TTEECCCCSGGGEEECTTS--------------------CEEECCCTTCEECSSCCCCSCCSCGGGCCHHHHS
T ss_pred             HHHHHH-CCccccCCchHHeEEeCCC--------------------CEEecccceeeecCCCCCCCccCCcCccCHHHHh
Confidence            999999 7999999999999999987                    799999999998754   4567899999999986


Q ss_pred             C--CCCcHHHHHHHhhcccCCCCCCCCCCChh--hhHHHHHHHHhhcccCCCCCCCchhHHHHHHHHHHHhcCCCcCcCC
Q psy9184         486 G--EGDYQFDMYRMMRKQCQNNWQNFTPKNNV--FWIHYLVDKATCLKKGYQYLRAPRHQAFELLEELGQNALHFDSCYE  561 (562)
Q Consensus       486 g--~~~~q~dIy~lm~~~~~~~W~~~~P~tn~--~wl~yl~~~Ll~~~~~~~~~~~~~~~~~~~l~~l~~~~l~~~s~~~  561 (562)
                      +  .++..+|+|++ |..++.+..+..||...  .-...+....+.....++..-      -..++.|..++|+.+...|
T Consensus       364 ~~~~y~~~vDiWSL-GvilYEmLtG~~PF~~~~~~~~~~i~~~i~~~~~~~p~~~------S~~a~dLI~~lL~~dP~~R  436 (689)
T 3v5w_A          364 KGVAYDSSADWFSL-GCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVELPDSF------SPELRSLLEGLLQRDVNRR  436 (689)
T ss_dssp             TTCCCCTHHHHHHH-HHHHHHHHHSSCTTCGGGCCCHHHHHHHHHHCCCCCCTTS------CHHHHHHHHHHTCSCGGGC
T ss_pred             CCCCCCcHHHHHHH-HHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCccC------CHHHHHHHHHHccCCHhHC
Confidence            4  36777999874 45554555666676321  112233344444233444322      2357788899999887766


Q ss_pred             C
Q psy9184         562 M  562 (562)
Q Consensus       562 ~  562 (562)
                      +
T Consensus       437 l  437 (689)
T 3v5w_A          437 L  437 (689)
T ss_dssp             T
T ss_pred             C
Confidence            4

>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A

Probab=99.98  E-value=7.8e-33  Score=308.27  Aligned_cols=232  Identities=17%  Similarity=0.179  Sum_probs=177.2

Q ss_pred             CCCceeeeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCccccc
Q psy9184         261 SALKNCKKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTEL  334 (562)
Q Consensus       261 ~~y~~~~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~l  334 (562)
                      ++|++++.||+|+||.||+|      +.||+|++....        ....+.+.+|+.+|+.|+|               
T Consensus       157 ~~Y~i~~~lG~G~fg~V~~~~~~~tg~~~AiK~i~~~~--------~~~~~~~~~Ei~il~~l~h---------------  213 (573)
T 3uto_A          157 DHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPH--------ESDKETVRKEIQTMSVLRH---------------  213 (573)
T ss_dssp             GTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCS--------HHHHHHHHHHHHHHHHTCC---------------
T ss_pred             cccEEEEEEeeccCeEEEEEEECCCCCEEEEEEEeccc--------hhhHHHHHHHHHHHHhCCC---------------
Confidence            57999999999999999999      899999998653        3334678899999999998               


Q ss_pred             ccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc----cCCHHHHHHHHHHHHHHHH
Q psy9184         335 LKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK----YRSPNQTYAMILQVVFSLA  410 (562)
Q Consensus       335 ~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~----~l~e~~i~~I~~QIl~aL~  410 (562)
                                 ||||+++++|.+             ++.+|||||||.||+|++.+.    .+++.+++.+++||+.||.
T Consensus       214 -----------pnIv~l~~~~~~-------------~~~~~iv~E~~~gg~L~~~i~~~~~~l~e~~~~~~~~qi~~al~  269 (573)
T 3uto_A          214 -----------PTLVNLHDAFED-------------DNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLC  269 (573)
T ss_dssp             -----------TTBCCEEEEEEC-------------SSEEEEEEECCCCCBHHHHHTCTTSCEEHHHHHHHHHHHHHHHH
T ss_pred             -----------CCCCeEEEEEEE-------------CCEEEEEEeecCCCcHHHHHHHhCCCCCHHHHHHHHHHHHHHHH
Confidence                       999999999986             569999999999999887764    3889999999999999999


Q ss_pred             HHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecCC----cEEEeecCCCccccCC
Q psy9184         411 VAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVGE----KICYYDLSQDEELFEG  486 (562)
Q Consensus       411 yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~~----g~v~~~l~~~pelF~g  486 (562)
                      |||+ +||+||||||+|||++.+..                  ..+||+|||+|+.....    ..+++..|++||++.+
T Consensus       270 ylH~-~~iiHRDlKp~Nill~~~~~------------------~~vKl~DFG~a~~~~~~~~~~~~~GT~~y~APEv~~~  330 (573)
T 3uto_A          270 HMHE-NNYVHLDLKPENIMFTTKRS------------------NELKLIDFGLTAHLDPKQSVKVTTGTAEFAAPEVAEG  330 (573)
T ss_dssp             HHHH-TTEECCCCCGGGEEESSSSC------------------CCEEECCCSSCEECCTTSEEEEECSSGGGCCHHHHTT
T ss_pred             HHHH-CCeeeccCChhhccccCCCC------------------CCEEEeeccceeEccCCCceeeeEECccccCHHHhCC
Confidence            9999 79999999999999986521                  17999999999987653    2346889999999988


Q ss_pred             C-CCcHHHHHHHhhcccCCCCCCCCCCChhhhHHHHHHHHhhcccCCCCCCCchhHHHHHHHHHHHhcCCCcCcCCC
Q psy9184         487 E-GDYQFDMYRMMRKQCQNNWQNFTPKNNVFWIHYLVDKATCLKKGYQYLRAPRHQAFELLEELGQNALHFDSCYEM  562 (562)
Q Consensus       487 ~-~~~q~dIy~lm~~~~~~~W~~~~P~tn~~wl~yl~~~Ll~~~~~~~~~~~~~~~~~~~l~~l~~~~l~~~s~~~~  562 (562)
                      . ++...|||++ |..+..+..+..||....-. .+..........++.  ......-..++.|+.+||+++...|+
T Consensus       331 ~~y~~~~DiWSl-Gvilyeml~G~~Pf~~~~~~-~~~~~i~~~~~~~~~--~~~~~~s~~~~dli~~~L~~dp~~R~  403 (573)
T 3uto_A          331 KPVGYYTDMWSV-GVLSYILLSGLSPFGGENDD-ETLRNVKSCDWNMDD--SAFSGISEDGKDFIRKLLLADPNTRM  403 (573)
T ss_dssp             CCBCHHHHHHHH-HHHHHHHHHSCCSSCCSSHH-HHHHHHHTTCCCCCS--GGGTTSCHHHHHHHHTTSCSSGGGSC
T ss_pred             CCCCcHHHHHHH-HHHHHHHHHCCCCCCCcCHH-HHHHHHHhCCCCCCc--ccccCCCHHHHHHHHHHccCChhHCc
Confidence            5 5666999875 33333444566666433212 222233331222222  11111234677889999999887664

>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*

Probab=99.97  E-value=9.7e-32  Score=276.47  Aligned_cols=171  Identities=18%  Similarity=0.209  Sum_probs=136.2

Q ss_pred             CCceeeeeeccCceEEEEE----eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCcccccccc
Q psy9184         262 ALKNCKKIGEGVYGEVFKL----NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTELLKC  337 (562)
Q Consensus       262 ~y~~~~~LG~GsfG~Vyka----~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~l~~~  337 (562)
                      +|.+.++||+|+||+||+|    +.||||++....        ... .....|+..+..++|                  
T Consensus         4 ~i~L~~~iG~G~fG~Vy~~~~~g~~VAvK~l~~~~--------~~~-~~~e~Ei~~~~~l~H------------------   56 (303)
T 3hmm_A            4 TIVLQESIGKGRFGEVWRGKWRGEEVAVKIFSSRE--------ERS-WFREAEIYQTVMLRH------------------   56 (303)
T ss_dssp             GEEEEEEEEECSSSEEEEEEETTEEEEEEEECGGG--------HHH-HHHHHHHHTSTTCCC------------------
T ss_pred             EEEEEEEEeeCCCeEEEEEEECCEEEEEEEECccc--------hhh-HHHHHHHHHHhcCCC------------------
Confidence            4788899999999999999    899999987532        111 122356666677887                  


Q ss_pred             cccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc--cCCHHHHHHHHHHHHHHHHHHHhh
Q psy9184         338 SCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK--YRSPNQTYAMILQVVFSLAVAEVE  415 (562)
Q Consensus       338 ~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~--~l~e~~i~~I~~QIl~aL~yLH~~  415 (562)
                              ||||++++++.+...         ....+|||||||+||+|.+.+.  .+++.++..++.|++.||+|||+ 
T Consensus        57 --------pNIv~l~g~~~~~~~---------~~~~~~lV~Ey~~~gsL~~~l~~~~l~~~~~~~i~~~ia~gl~ylH~-  118 (303)
T 3hmm_A           57 --------ENILGFIAADNKDNG---------TWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIKLALSTASGLAHLHM-  118 (303)
T ss_dssp             --------TTBCCEEEEEEEECS---------SSEEEEEEEECCTTCBHHHHHHHCCBCHHHHHHHHHHHHHHHHHHHC-
T ss_pred             --------CCCCcEEEEEEecCC---------CceEEEEEecCCCCCcHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHH-
Confidence                    999999998875320         1236899999999998887775  48899999999999999999998 


Q ss_pred             C--------CeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecC---------CcEEEeecC
Q psy9184         416 L--------EFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVG---------EKICYYDLS  478 (562)
Q Consensus       416 ~--------~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~---------~g~v~~~l~  478 (562)
                      .        +||||||||+||||+.++                    .+||+|||+|+....         .+.+++..|
T Consensus       119 ~~~~~~~~~~IiHRDlKp~NILl~~~~--------------------~~Ki~DFGla~~~~~~~~~~~~~~~~~~GT~~y  178 (303)
T 3hmm_A          119 EIVGTQGKPAIAHRDLKSKNILVKKNG--------------------TCCIADLGLAVRHDSATDTIDIAPNHRVGTKRY  178 (303)
T ss_dssp             CBCSTTCBCCEECSCCCGGGEEECTTS--------------------CEEECCCTTCEEEETTTTEESCC-----CCGGG
T ss_pred             hhhhccCCCCEeeccCCcccEEECCCC--------------------CEEEEeCCCCccccCCCCceeeecccccccccc
Confidence            4        899999999999999886                    799999999998754         134678999


Q ss_pred             CCccccCCCC-------CcHHHHHHH
Q psy9184         479 QDEELFEGEG-------DYQFDMYRM  497 (562)
Q Consensus       479 ~~pelF~g~~-------~~q~dIy~l  497 (562)
                      ++||++.+..       +.++|||+.
T Consensus       179 mAPE~l~~~~~~~~~~~~~k~DVwS~  204 (303)
T 3hmm_A          179 MAPEVLDDSINMKHFESFKRADIYAM  204 (303)
T ss_dssp             CCHHHHTTCSCTTCHHHHHHHHHHHH
T ss_pred             cCHHHhcccccccCCccChhHhhhhH
Confidence            9999998742       234899885

>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}

Probab=99.96  E-value=6.6e-30  Score=267.87  Aligned_cols=230  Identities=14%  Similarity=0.140  Sum_probs=173.1

Q ss_pred             CCCCceeeeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCcccc
Q psy9184         260 SSALKNCKKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTE  333 (562)
Q Consensus       260 ~~~y~~~~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~  333 (562)
                      .++|++.+.||+|+||.||+|      +.||||++....     .......+.+.+|..+++.+.+              
T Consensus        22 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AvK~~~~~~-----~~~~~~~~~~~~E~~il~~~~~--------------   82 (353)
T 3txo_A           22 IDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDV-----ILQDDDVECTMTEKRILSLARN--------------   82 (353)
T ss_dssp             -CCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHH-----HHHHTTHHHHHHHHHHHHHTTT--------------
T ss_pred             hhheEEEEEEeeCCCEEEEEEEEcCCCCEEEEEEEEHHH-----hcchhHHHHHHHHHHHHHhccC--------------
Confidence            478999999999999999999      789999998642     2233445678899999999854              


Q ss_pred             cccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc---cCCHHHHHHHHHHHHHHHH
Q psy9184         334 LLKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK---YRSPNQTYAMILQVVFSLA  410 (562)
Q Consensus       334 l~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~---~l~e~~i~~I~~QIl~aL~  410 (562)
                                 ||||++++++|.+             .+.+|+|||||.||++...+.   .+++.+++.++.||+.||.
T Consensus        83 -----------hp~Iv~l~~~~~~-------------~~~~~lv~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~  138 (353)
T 3txo_A           83 -----------HPFLTQLFCCFQT-------------PDRLFFVMEFVNGGDLMFHIQKSRRFDEARARFYAAEIISALM  138 (353)
T ss_dssp             -----------CTTBCCEEEEEEC-------------SSEEEEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHH
T ss_pred             -----------CCceeeEEEEEEe-------------CCEEEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHH
Confidence                       4999999999976             558999999999998877664   4999999999999999999


Q ss_pred             HHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecC-----CcEEEeecCCCccccC
Q psy9184         411 VAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVG-----EKICYYDLSQDEELFE  485 (562)
Q Consensus       411 yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~-----~g~v~~~l~~~pelF~  485 (562)
                      |||+ .||+||||||+|||++.++                    .+||+|||+|+....     ...+++..|++||++.
T Consensus       139 ~LH~-~givHrDlkp~NILl~~~g--------------------~ikL~DFG~a~~~~~~~~~~~~~~gt~~y~aPE~~~  197 (353)
T 3txo_A          139 FLHD-KGIIYRDLKLDNVLLDHEG--------------------HCKLADFGMCKEGICNGVTTATFCGTPDYIAPEILQ  197 (353)
T ss_dssp             HHHH-TTCBCCCCCGGGEEECTTS--------------------CEEECCCTTCBCSCC---------CCGGGCCHHHHH
T ss_pred             HHHH-CCCcccCCCHHHEEECCCC--------------------CEEEccccceeecccCCccccccCCCcCeEChhhcC
Confidence            9999 7999999999999999887                    799999999986432     2345688899999987


Q ss_pred             CC-CCcHHHHHHHhhcccCCCCCCCCCCChhhhHHHHHHHHhhcccCCCCCCCchhHHHHHHHHHHHhcCCCcCcCC
Q psy9184         486 GE-GDYQFDMYRMMRKQCQNNWQNFTPKNNVFWIHYLVDKATCLKKGYQYLRAPRHQAFELLEELGQNALHFDSCYE  561 (562)
Q Consensus       486 g~-~~~q~dIy~lm~~~~~~~W~~~~P~tn~~wl~yl~~~Ll~~~~~~~~~~~~~~~~~~~l~~l~~~~l~~~s~~~  561 (562)
                      +. .+...|||++.- .....+.+..|+.... ...+...++.....++..-      -..+..|.+.+|+.+...|
T Consensus       198 ~~~~~~~~DiwslG~-il~ell~G~~Pf~~~~-~~~~~~~i~~~~~~~p~~~------~~~~~~li~~lL~~dP~~R  266 (353)
T 3txo_A          198 EMLYGPAVDWWAMGV-LLYEMLCGHAPFEAEN-EDDLFEAILNDEVVYPTWL------HEDATGILKSFMTKNPTMR  266 (353)
T ss_dssp             HHHCTTHHHHHHHHH-HHHHHHHSSCSSCCSS-HHHHHHHHHHCCCCCCTTS------CHHHHHHHHHHTCSSGGGS
T ss_pred             CCCcCCccCCCcchH-HHHHHHhCCCCCCCCC-HHHHHHHHHcCCCCCCCCC------CHHHHHHHHHHhhhCHHHc
Confidence            73 566799987543 3334445556664332 2223344444233343321      2356777888888877665

>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A

Probab=99.96  E-value=1.1e-29  Score=263.13  Aligned_cols=227  Identities=19%  Similarity=0.252  Sum_probs=175.4

Q ss_pred             CCCceeeeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCccccc
Q psy9184         261 SALKNCKKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTEL  334 (562)
Q Consensus       261 ~~y~~~~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~l  334 (562)
                      ++|++.+.||+|+||.||+|      +.||||++....      ......+.+.+|+.+++.++|               
T Consensus        15 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~------~~~~~~~~~~~E~~~l~~l~h---------------   73 (328)
T 3fe3_A           15 GNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQ------LNPTSLQKLFREVRIMKILNH---------------   73 (328)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGG------SCHHHHHHHHHHHHHHHHCCC---------------
T ss_pred             CCEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhhc------CCHHHHHHHHHHHHHHHhCCC---------------
Confidence            67999999999999999999      789999998653      234456778999999999998               


Q ss_pred             ccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc---cCCHHHHHHHHHHHHHHHHH
Q psy9184         335 LKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK---YRSPNQTYAMILQVVFSLAV  411 (562)
Q Consensus       335 ~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~---~l~e~~i~~I~~QIl~aL~y  411 (562)
                                 |||+++++++.+             ++.+|+||||+.||++.+.+.   .+++.+++.++.||+.||.|
T Consensus        74 -----------pnIv~l~~~~~~-------------~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~al~~  129 (328)
T 3fe3_A           74 -----------PNIVKLFEVIET-------------EKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIVSAVQY  129 (328)
T ss_dssp             -----------TTBCCEEEEEEC-------------SSEEEEEECCCTTCBHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
T ss_pred             -----------CCEeeEEEEEEE-------------CCEEEEEEECCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHH
Confidence                       999999999875             568999999999998877663   59999999999999999999


Q ss_pred             HHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecC----CcEEEeecCCCccccCCC
Q psy9184         412 AEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVG----EKICYYDLSQDEELFEGE  487 (562)
Q Consensus       412 LH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~----~g~v~~~l~~~pelF~g~  487 (562)
                      ||+ .||+||||||+|||++.++                    .+||+|||+|+....    ...+++..|++||++.+.
T Consensus       130 lH~-~~ivHrDlkp~NIll~~~~--------------------~~kl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~  188 (328)
T 3fe3_A          130 CHQ-KRIVHRDLKAENLLLDADM--------------------NIKIADFGFSNEFTVGGKLDAFCGAPPYAAPELFQGK  188 (328)
T ss_dssp             HHH-TTCCCSCCCGGGEEECTTS--------------------CEEECSTTCCGGGSSSCGGGTTSSSGGGCCHHHHHTC
T ss_pred             HHH-CCEeccCCCHHHEEEcCCC--------------------CEEEeeccCceecCCCCccccccCCcceeCcccccCC
Confidence            999 7999999999999999886                    799999999986543    233467789999999885


Q ss_pred             C--CcHHHHHHHhhcccCCCCCCCCCCChhhhHHHHHHHHhhcccCCCCCCCchhHHHHHHHHHHHhcCCCcCcCC
Q psy9184         488 G--DYQFDMYRMMRKQCQNNWQNFTPKNNVFWIHYLVDKATCLKKGYQYLRAPRHQAFELLEELGQNALHFDSCYE  561 (562)
Q Consensus       488 ~--~~q~dIy~lm~~~~~~~W~~~~P~tn~~wl~yl~~~Ll~~~~~~~~~~~~~~~~~~~l~~l~~~~l~~~s~~~  561 (562)
                      .  ....|||++.- .......+..|+.... ...+...++.....++..-      -..+..|.++||+++...|
T Consensus       189 ~~~~~~~DiwslG~-il~ell~g~~pf~~~~-~~~~~~~i~~~~~~~p~~~------s~~~~~li~~~L~~dP~~R  256 (328)
T 3fe3_A          189 KYDGPEVDVWSLGV-ILYTLVSGSLPFDGQN-LKELRERVLRGKYRIPFYM------STDCENLLKRFLVLNPIKR  256 (328)
T ss_dssp             CCCSHHHHHHHHHH-HHHHHHHSSCSSCCSS-HHHHHHHHHHCCCCCCTTS------CHHHHHHHHHHCCSSTTTS
T ss_pred             CcCCchhhhhhhHH-HHHHHHhCCCCCCCCC-HHHHHHHHHhCCCCCCCCC------CHHHHHHHHHHCCCChhHC
Confidence            4  35699988643 3334444555664433 2333444444122222211      2356778889998887765

>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...

Probab=99.96  E-value=1.7e-29  Score=263.04  Aligned_cols=228  Identities=16%  Similarity=0.153  Sum_probs=172.1

Q ss_pred             CCCceeeeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCccccc
Q psy9184         261 SALKNCKKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTEL  334 (562)
Q Consensus       261 ~~y~~~~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~l  334 (562)
                      ++|++++.||+|+||.||+|      +.||||++....     .........+.+|+.+++.++|               
T Consensus         5 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~-----~~~~~~~~~~~~E~~~l~~l~h---------------   64 (337)
T 1o6l_A            5 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEV-----IIAKDEVAHTVTESRVLQNTRH---------------   64 (337)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHH-----HHHTTCHHHHHHHHHHHHSCCC---------------
T ss_pred             HHeEEEEEEecCCCeEEEEEEECCCCCEEEEEEEeHHH-----hhhhhHHHHHHHHHHHHHhCCC---------------
Confidence            57999999999999999999      789999998642     1123345678899999999988               


Q ss_pred             ccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc---cCCHHHHHHHHHHHHHHHHH
Q psy9184         335 LKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK---YRSPNQTYAMILQVVFSLAV  411 (562)
Q Consensus       335 ~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~---~l~e~~i~~I~~QIl~aL~y  411 (562)
                                 |||++++++|.+             .+.+|+||||++||++...+.   .+++.+++.++.||+.||.|
T Consensus        65 -----------p~iv~l~~~~~~-------------~~~~~lv~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~  120 (337)
T 1o6l_A           65 -----------PFLTALKYAFQT-------------HDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEY  120 (337)
T ss_dssp             -----------TTBCCEEEEEEC-------------SSEEEEEEECCTTCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHH
T ss_pred             -----------CcCcceEEEEEe-------------CCEEEEEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHH
Confidence                       999999999975             558999999999998876664   48999999999999999999


Q ss_pred             HHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecC-----CcEEEeecCCCccccCC
Q psy9184         412 AEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVG-----EKICYYDLSQDEELFEG  486 (562)
Q Consensus       412 LH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~-----~g~v~~~l~~~pelF~g  486 (562)
                      ||+ .||+||||||+|||++.++                    .+||+|||+|+....     ...+++..|++||++.+
T Consensus       121 LH~-~~ivHrDlkp~NIll~~~g--------------------~vkL~DFG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~  179 (337)
T 1o6l_A          121 LHS-RDVVYRDIKLENLMLDKDG--------------------HIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLED  179 (337)
T ss_dssp             HHH-TTCBCCCCCGGGEEECTTS--------------------CEEECCCTTCBCSCCTTCCBCCCEECGGGCCGGGGSS
T ss_pred             HHH-CCeecCcCCHHHEEECCCC--------------------CEEEeeccchhhcccCCCcccccccChhhCChhhhcC
Confidence            999 7999999999999999887                    799999999986432     34567889999999887


Q ss_pred             C-CCcHHHHHHHhhcccCCCCCCCCCCChhhhHHHHHHHHhhcccCCCCCCCchhHHHHHHHHHHHhcCCCcCcCC
Q psy9184         487 E-GDYQFDMYRMMRKQCQNNWQNFTPKNNVFWIHYLVDKATCLKKGYQYLRAPRHQAFELLEELGQNALHFDSCYE  561 (562)
Q Consensus       487 ~-~~~q~dIy~lm~~~~~~~W~~~~P~tn~~wl~yl~~~Ll~~~~~~~~~~~~~~~~~~~l~~l~~~~l~~~s~~~  561 (562)
                      . .+...|+|++.-. ......+..|+.+.. ...+...++.....++..-      -..+..|.+.+|..+...|
T Consensus       180 ~~~~~~~DiwslG~i-l~ell~g~~Pf~~~~-~~~~~~~i~~~~~~~p~~~------s~~~~~li~~lL~~dP~~R  247 (337)
T 1o6l_A          180 NDYGRAVDWWGLGVV-MYEMMCGRLPFYNQD-HERLFELILMEEIRFPRTL------SPEAKSLLAGLLKKDPKQR  247 (337)
T ss_dssp             SCBCTTHHHHHHHHH-HHHHHHSSCSSCCSS-HHHHHHHHHHCCCCCCTTS------CHHHHHHHHHHTCSSTTTS
T ss_pred             CCCCchhhcccchhH-HHHHhcCCCCCCCCC-HHHHHHHHHcCCCCCCCCC------CHHHHHHHHHHhhcCHHHh
Confidence            4 4566999885433 333344455553322 1122233333133333322      2356677788888776655

>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}

Probab=99.96  E-value=1.3e-29  Score=270.10  Aligned_cols=231  Identities=16%  Similarity=0.177  Sum_probs=172.5

Q ss_pred             CCCceeeeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCccccc
Q psy9184         261 SALKNCKKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTEL  334 (562)
Q Consensus       261 ~~y~~~~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~l  334 (562)
                      .+|+++++||+|+||.||+|      +.||+|+++....     ........+.+|..+++.+.+               
T Consensus        52 ~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AvK~~~k~~~-----~~~~~~~~~~~E~~il~~~~~---------------  111 (396)
T 4dc2_A           52 QDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELV-----NDDEDIDWVQTEKHVFEQASN---------------  111 (396)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGT-----C----CCHHHHHHHHHHHHTT---------------
T ss_pred             hHcEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhc-----cCHHHHHHHHHHHHHHHhcCC---------------
Confidence            57999999999999999999      7899999987531     122333567889999988743               


Q ss_pred             ccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc---cCCHHHHHHHHHHHHHHHHH
Q psy9184         335 LKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK---YRSPNQTYAMILQVVFSLAV  411 (562)
Q Consensus       335 ~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~---~l~e~~i~~I~~QIl~aL~y  411 (562)
                                ||||++++++|.+             .+.+|+|||||+||++...+.   .+++..++.++.||+.||.|
T Consensus       112 ----------hp~Iv~l~~~~~~-------------~~~~~lV~E~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~  168 (396)
T 4dc2_A          112 ----------HPFLVGLHSCFQT-------------ESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNY  168 (396)
T ss_dssp             ----------CTTBCCEEEEEEC-------------SSEEEEEEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHH
T ss_pred             ----------CCCcCeeEEEEEE-------------CCEEEEEEEcCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHH
Confidence                      4999999999986             558999999999998876664   49999999999999999999


Q ss_pred             HHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecC-----CcEEEeecCCCccccCC
Q psy9184         412 AEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVG-----EKICYYDLSQDEELFEG  486 (562)
Q Consensus       412 LH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~-----~g~v~~~l~~~pelF~g  486 (562)
                      ||+ .||+||||||+|||++.++                    .+||+|||+|+....     ...+++..|++||++.+
T Consensus       169 LH~-~givHrDLKp~NILl~~~g--------------------~ikL~DFGla~~~~~~~~~~~~~~gt~~Y~aPE~l~~  227 (396)
T 4dc2_A          169 LHE-RGIIYRDLKLDNVLLDSEG--------------------HIKLTDYGMCKEGLRPGDTTSTFCGTPNYIAPEILRG  227 (396)
T ss_dssp             HHH-TTCBCCCCCGGGEEECTTS--------------------CEEECCCTTCBCCCCTTCCBCCCCBCGGGCCHHHHTT
T ss_pred             HHH-CCEEeccCCHHHEEECCCC--------------------CEEEeecceeeecccCCCccccccCCcccCCchhhcC
Confidence            999 7999999999999999887                    799999999986332     33456888999999887


Q ss_pred             C-CCcHHHHHHHhhcccCCCCCCCCCCC--------hhhhHHHHHHHHhhcccCCCCCCCchhHHHHHHHHHHHhcCCCc
Q psy9184         487 E-GDYQFDMYRMMRKQCQNNWQNFTPKN--------NVFWIHYLVDKATCLKKGYQYLRAPRHQAFELLEELGQNALHFD  557 (562)
Q Consensus       487 ~-~~~q~dIy~lm~~~~~~~W~~~~P~t--------n~~wl~yl~~~Ll~~~~~~~~~~~~~~~~~~~l~~l~~~~l~~~  557 (562)
                      . .+...|+|++.-. +.....+..|+.        ......++.+..+.....++..-      -..+..|.+.+|+.+
T Consensus       228 ~~~~~~~DiwslGvl-lyell~G~~Pf~~~~~~~~~~~~~~~~~~~~i~~~~~~~p~~~------s~~~~~li~~lL~~d  300 (396)
T 4dc2_A          228 EDYGFSVDWWALGVL-MFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIPRSL------SVKAASVLKSFLNKD  300 (396)
T ss_dssp             CCBCTHHHHHHHHHH-HHHHHHSSCSSTTTTC------CCHHHHHHHHHHCCCCCCTTS------CHHHHHHHHHHTCSC
T ss_pred             CCCChHHHHHHHHHH-HHHHHhCCCCCcccccccccchhhHHHHHHHHhccccCCCCcC------CHHHHHHHHHHhcCC
Confidence            4 4667899875333 323334444442        11123344555555233344322      235677888889888


Q ss_pred             CcCCC
Q psy9184         558 SCYEM  562 (562)
Q Consensus       558 s~~~~  562 (562)
                      ...|+
T Consensus       301 P~~R~  305 (396)
T 4dc2_A          301 PKERL  305 (396)
T ss_dssp             TTTST
T ss_pred             HhHcC
Confidence            77663

>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*

Probab=99.96  E-value=3.8e-29  Score=254.41  Aligned_cols=229  Identities=18%  Similarity=0.224  Sum_probs=171.8

Q ss_pred             CCCCceeeeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCcccc
Q psy9184         260 SSALKNCKKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTE  333 (562)
Q Consensus       260 ~~~y~~~~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~  333 (562)
                      ..+|++.+.||+|+||.||+|      +.||+|++....        ....+.+.+|+.+++.++|              
T Consensus        19 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~--------~~~~~~~~~E~~~l~~l~h--------------   76 (297)
T 3fxz_A           19 KKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQ--------QPKKELIINEILVMRENKN--------------   76 (297)
T ss_dssp             GGTBCCCEEEEEETTEEEEEEEBTTTCCEEEEEEEEGGG--------CSCHHHHHHHHHHHHHCCC--------------
T ss_pred             hhceeeeeeeccCCCeEEEEEEECCCCcEEEEEEeeccc--------ccHHHHHHHHHHHHhcCCC--------------
Confidence            367999999999999999999      789999998653        1223567899999999998              


Q ss_pred             cccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc--cCCHHHHHHHHHHHHHHHHH
Q psy9184         334 LLKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK--YRSPNQTYAMILQVVFSLAV  411 (562)
Q Consensus       334 l~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~--~l~e~~i~~I~~QIl~aL~y  411 (562)
                                  |||++++++|..             ++.+|+||||+.||++.+.+.  .+++.+++.++.||+.||.|
T Consensus        77 ------------p~iv~~~~~~~~-------------~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~qi~~~l~~  131 (297)
T 3fxz_A           77 ------------PNIVNYLDSYLV-------------GDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQALEF  131 (297)
T ss_dssp             ------------TTBCCEEEEEEE-------------TTEEEEEEECCTTCBHHHHHHHSCCCHHHHHHHHHHHHHHHHH
T ss_pred             ------------CCCCeEeEEEEE-------------CCEEEEEEECCCCCCHHHHHhhcCCCHHHHHHHHHHHHHHHHH
Confidence                        999999999875             558999999999998776664  38999999999999999999


Q ss_pred             HHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecC-----CcEEEeecCCCccccCC
Q psy9184         412 AEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVG-----EKICYYDLSQDEELFEG  486 (562)
Q Consensus       412 LH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~-----~g~v~~~l~~~pelF~g  486 (562)
                      ||+ .||+||||||+|||++.++                    .+||+|||+|+....     ....++..|++||++.+
T Consensus       132 lH~-~~i~H~Dlkp~Nil~~~~~--------------------~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~  190 (297)
T 3fxz_A          132 LHS-NQVIHRDIKSDNILLGMDG--------------------SVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTR  190 (297)
T ss_dssp             HHH-TTEECCCCSGGGEEECTTC--------------------CEEECCCTTCEECCSTTCCBCCCCSCGGGCCHHHHHC
T ss_pred             HHh-CCceeCCCCHHHEEECCCC--------------------CEEEeeCCCceecCCcccccCCccCCcCccChhhhcC
Confidence            999 7999999999999999886                    799999999987654     23456788999998876


Q ss_pred             C-CCcHHHHHHHhhcccCCCCCCCCCCChhhhHHHHHHHHhhcccCCCCCCCchhHHHHHHHHHHHhcCCCcCcCC
Q psy9184         487 E-GDYQFDMYRMMRKQCQNNWQNFTPKNNVFWIHYLVDKATCLKKGYQYLRAPRHQAFELLEELGQNALHFDSCYE  561 (562)
Q Consensus       487 ~-~~~q~dIy~lm~~~~~~~W~~~~P~tn~~wl~yl~~~Ll~~~~~~~~~~~~~~~~~~~l~~l~~~~l~~~s~~~  561 (562)
                      . .+...|||++.-. ....+.+..|+.+..-...+..........+..    ....-..+.+|...+|.++...|
T Consensus       191 ~~~~~~~DiwslG~i-l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~li~~~l~~dp~~R  261 (297)
T 3fxz_A          191 KAYGPKVDIWSLGIM-AIEMIEGEPPYLNENPLRALYLIATNGTPELQN----PEKLSAIFRDFLNRCLEMDVEKR  261 (297)
T ss_dssp             SCBCTHHHHHHHHHH-HHHHHHSSCTTTTSCHHHHHHHHHHHCSCCCSC----GGGSCHHHHHHHHHHSCSSTTTS
T ss_pred             CCCCcHHHHHHHHHH-HHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCCC----ccccCHHHHHHHHHHccCChhHC
Confidence            4 5667999885433 333444555553332222222212220111111    11224467788889998887765

>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...

Probab=99.96  E-value=4.8e-29  Score=260.84  Aligned_cols=228  Identities=18%  Similarity=0.222  Sum_probs=175.0

Q ss_pred             CCCceeeeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCccccc
Q psy9184         261 SALKNCKKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTEL  334 (562)
Q Consensus       261 ~~y~~~~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~l  334 (562)
                      ++|++++.||+|+||.||+|      +.||||++....     .......+.+.+|+.+++.++|               
T Consensus        41 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~-----~~~~~~~~~~~~E~~~l~~l~h---------------  100 (350)
T 1rdq_E           41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQK-----VVKLKQIEHTLNEKRILQAVNF---------------  100 (350)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHH-----HHHTTCHHHHHHHHHHHTTCCC---------------
T ss_pred             HHCEEEEEeecCcCcEEEEEEECCCCCEEEEEEEEhHH-----hccHHHHHHHHHHHHHHHhCCC---------------
Confidence            67999999999999999999      789999998642     1223345678899999999988               


Q ss_pred             ccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc---cCCHHHHHHHHHHHHHHHHH
Q psy9184         335 LKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK---YRSPNQTYAMILQVVFSLAV  411 (562)
Q Consensus       335 ~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~---~l~e~~i~~I~~QIl~aL~y  411 (562)
                                 |||++++++|.+             ++.+|+||||+.||++.+.+.   .+++.+++.++.||+.||.|
T Consensus       101 -----------p~iv~~~~~~~~-------------~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~  156 (350)
T 1rdq_E          101 -----------PFLVKLEFSFKD-------------NSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEY  156 (350)
T ss_dssp             -----------TTBCCEEEEEEC-------------SSEEEEEEECCTTCBHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
T ss_pred             -----------CCCCeEEEEEEc-------------CCEEEEEEcCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHH
Confidence                       999999999875             558999999999998877664   48999999999999999999


Q ss_pred             HHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecC--CcEEEeecCCCccccCCC-C
Q psy9184         412 AEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVG--EKICYYDLSQDEELFEGE-G  488 (562)
Q Consensus       412 LH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~--~g~v~~~l~~~pelF~g~-~  488 (562)
                      ||+ .||+||||||+|||++.++                    .+||+|||+|+....  ...+++..|++||++.+. .
T Consensus       157 LH~-~~ivHrDlkp~NIll~~~g--------------------~~kL~DFg~a~~~~~~~~~~~gt~~y~aPE~~~~~~~  215 (350)
T 1rdq_E          157 LHS-LDLIYRDLKPENLLIDQQG--------------------YIQVTDFGFAKRVKGRTWTLCGTPEALAPEIILSKGY  215 (350)
T ss_dssp             HHH-TTEECCCCSGGGEEECTTS--------------------CEEECCCTTCEECSSCBCCCEECGGGCCHHHHTTCCB
T ss_pred             HHH-CCcccccCccceEEECCCC--------------------CEEEcccccceeccCCcccccCCccccCHHHhcCCCC
Confidence            999 7999999999999999886                    799999999997754  345678899999998774 4


Q ss_pred             CcHHHHHHHhhcccCCCCCCCCCCChhhhHHHHHHHHhhcccCCCCCCCchhHHHHHHHHHHHhcCCCcCcCC
Q psy9184         489 DYQFDMYRMMRKQCQNNWQNFTPKNNVFWIHYLVDKATCLKKGYQYLRAPRHQAFELLEELGQNALHFDSCYE  561 (562)
Q Consensus       489 ~~q~dIy~lm~~~~~~~W~~~~P~tn~~wl~yl~~~Ll~~~~~~~~~~~~~~~~~~~l~~l~~~~l~~~s~~~  561 (562)
                      +...|||++.- .....+.+..|+.... ..-+..++......++..-      -..+..|.+.+|+.+...|
T Consensus       216 ~~~~DiwslG~-il~ell~g~~Pf~~~~-~~~~~~~i~~~~~~~p~~~------~~~~~~li~~lL~~dp~~R  280 (350)
T 1rdq_E          216 NKAVDWWALGV-LIYEMAAGYPPFFADQ-PIQIYEKIVSGKVRFPSHF------SSDLKDLLRNLLQVDLTKR  280 (350)
T ss_dssp             CTHHHHHHHHH-HHHHHHHSSCSSCCSS-HHHHHHHHHHCCCCCCTTC------CHHHHHHHHHHSCSCTTTC
T ss_pred             CCcCCEecccH-hHhHHhhCCCCCCCCC-HHHHHHHHHcCCCCCCCCC------CHHHHHHHHHHhhcCHHhc
Confidence            66699988543 3334444555553322 1222333443223333221      2357778888888877665

>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7

Probab=99.96  E-value=3.2e-29  Score=258.64  Aligned_cols=228  Identities=16%  Similarity=0.200  Sum_probs=172.7

Q ss_pred             CCCceeeeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCccccc
Q psy9184         261 SALKNCKKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTEL  334 (562)
Q Consensus       261 ~~y~~~~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~l  334 (562)
                      ++|++.+.||+|+||.||+|      +.||+|++....     .......+.+.+|+.+++.++|               
T Consensus         6 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~-----~~~~~~~~~~~~E~~~l~~l~h---------------   65 (318)
T 1fot_A            6 QDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEI-----VVRLKQVEHTNDERLMLSIVTH---------------   65 (318)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHH-----HHHTTCHHHHHHHHHHHHSCCB---------------
T ss_pred             HHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHH-----hhhhhHHHHHHHHHHHHhhCCC---------------
Confidence            67999999999999999999      789999998642     1122345678899999999988               


Q ss_pred             ccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc---cCCHHHHHHHHHHHHHHHHH
Q psy9184         335 LKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK---YRSPNQTYAMILQVVFSLAV  411 (562)
Q Consensus       335 ~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~---~l~e~~i~~I~~QIl~aL~y  411 (562)
                                 |||++++++|.+             .+.+|+||||+.||++.+.+.   .+++..++.++.||+.||.|
T Consensus        66 -----------p~Iv~~~~~~~~-------------~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~  121 (318)
T 1fot_A           66 -----------PFIIRMWGTFQD-------------AQQIFMIMDYIEGGELFSLLRKSQRFPNPVAKFYAAEVCLALEY  121 (318)
T ss_dssp             -----------TTBCCEEEEEEC-------------SSEEEEEECCCCSCBHHHHHHHTSSCCHHHHHHHHHHHHHHHHH
T ss_pred             -----------CCCceEeEEEEe-------------CCEEEEEEeCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHH
Confidence                       999999999975             558999999999998877664   48999999999999999999


Q ss_pred             HHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecC--CcEEEeecCCCccccCCC-C
Q psy9184         412 AEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVG--EKICYYDLSQDEELFEGE-G  488 (562)
Q Consensus       412 LH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~--~g~v~~~l~~~pelF~g~-~  488 (562)
                      ||+ .||+||||||+|||++.++                    .+||+|||+|+....  ...+++..|++||++.+. .
T Consensus       122 LH~-~~ivHrDlkp~NIll~~~g--------------------~~kL~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~~~  180 (318)
T 1fot_A          122 LHS-KDIIYRDLKPENILLDKNG--------------------HIKITDFGFAKYVPDVTYTLCGTPDYIAPEVVSTKPY  180 (318)
T ss_dssp             HHT-TTEECCCCCGGGEEECTTS--------------------CEEECCCSSCEECSSCBCCCCSCTTTCCHHHHTTCCB
T ss_pred             HHH-CCccccCCChheEEEcCCC--------------------CEEEeecCcceecCCccccccCCccccCHhHhcCCCC
Confidence            999 7999999999999999886                    799999999987654  234567889999998874 4


Q ss_pred             CcHHHHHHHhhcccCCCCCCCCCCChhhhHHHHHHHHhhcccCCCCCCCchhHHHHHHHHHHHhcCCCcCcCC
Q psy9184         489 DYQFDMYRMMRKQCQNNWQNFTPKNNVFWIHYLVDKATCLKKGYQYLRAPRHQAFELLEELGQNALHFDSCYE  561 (562)
Q Consensus       489 ~~q~dIy~lm~~~~~~~W~~~~P~tn~~wl~yl~~~Ll~~~~~~~~~~~~~~~~~~~l~~l~~~~l~~~s~~~  561 (562)
                      +...|+|++.- .......+..|+...... -+....+.....++..-      -..+..|...+|+.+...|
T Consensus       181 ~~~~DiwslG~-il~ell~g~~pf~~~~~~-~~~~~i~~~~~~~p~~~------~~~~~~li~~lL~~dp~~R  245 (318)
T 1fot_A          181 NKSIDWWSFGI-LIYEMLAGYTPFYDSNTM-KTYEKILNAELRFPPFF------NEDVKDLLSRLITRDLSQR  245 (318)
T ss_dssp             CTTHHHHHHHH-HHHHHHHSSCTTCCSSHH-HHHHHHHHCCCCCCTTS------CHHHHHHHHHHTCSCTTTC
T ss_pred             CcccchhhhHH-HHHHHHhCCCCCCCCCHH-HHHHHHHhCCCCCCCCC------CHHHHHHHHHHhccCHHHc
Confidence            55689987543 333344455555332211 22233333233333322      2356777888888776655

>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}

Probab=99.96  E-value=2.5e-28  Score=247.18  Aligned_cols=237  Identities=19%  Similarity=0.198  Sum_probs=169.0

Q ss_pred             CCCceeeeeeccCceEEEEE------eeEEEEEeecCCCCCCcc------------------hhHHHHHHHHHHHHHHHh
Q psy9184         261 SALKNCKKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNG------------------EEQKKFREIFSEIMVTKE  316 (562)
Q Consensus       261 ~~y~~~~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~------------------~~~~~~~~il~Ei~ilk~  316 (562)
                      ++|++.+.||+|+||.||+|      +.||||++..........                  ......+.+.+|+.+++.
T Consensus        13 ~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~   92 (298)
T 2zv2_A           13 NQYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIAILKK   92 (298)
T ss_dssp             TTEEEEEEEEC--CCEEEEEEETTTTEEEEEEEEECC-------------------------------CHHHHHHHHHHT
T ss_pred             cceEEEeEEeecCCEEEEEEEECCCCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHHHHHHHh
Confidence            67999999999999999999      789999998653110000                  011224568899999999


Q ss_pred             cCCccccCCCCCCcccccccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc--cCC
Q psy9184         317 TSDLQYRTENSTPCFTELLKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK--YRS  394 (562)
Q Consensus       317 L~h~~~~~~n~~p~fv~l~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~--~l~  394 (562)
                      ++|                          |||+++++++.+..           .+.+|+||||+++|++.+...  .++
T Consensus        93 l~h--------------------------~~iv~~~~~~~~~~-----------~~~~~lv~e~~~~~~l~~~~~~~~~~  135 (298)
T 2zv2_A           93 LDH--------------------------PNVVKLVEVLDDPN-----------EDHLYMVFELVNQGPVMEVPTLKPLS  135 (298)
T ss_dssp             CCC--------------------------TTBCCEEEEEECSS-----------SSEEEEEEECCTTCBSCCSSCSSCCC
T ss_pred             CCC--------------------------CCCCeEEEEEEcCC-----------CCEEEEEEecCCCCcHHHHhhcCCCC
Confidence            998                          99999999887521           458999999999998776543  489


Q ss_pred             HHHHHHHHHHHHHHHHHHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecCC----
Q psy9184         395 PNQTYAMILQVVFSLAVAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVGE----  470 (562)
Q Consensus       395 e~~i~~I~~QIl~aL~yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~~----  470 (562)
                      +.+++.++.||+.||.|||+ .||+||||||+|||++.++                    .+||+|||+|+.....    
T Consensus       136 ~~~~~~~~~qi~~~l~~lH~-~~ivH~Dlkp~Nil~~~~~--------------------~~kl~Dfg~~~~~~~~~~~~  194 (298)
T 2zv2_A          136 EDQARFYFQDLIKGIEYLHY-QKIIHRDIKPSNLLVGEDG--------------------HIKIADFGVSNEFKGSDALL  194 (298)
T ss_dssp             HHHHHHHHHHHHHHHHHHHH-TTEECCCCCGGGEEECTTS--------------------CEEECCCTTCEECSSSSCEE
T ss_pred             HHHHHHHHHHHHHHHHHHHH-CCeeccCCCHHHEEECCCC--------------------CEEEecCCCccccccccccc
Confidence            99999999999999999999 7999999999999999886                    7999999999876542    


Q ss_pred             -cEEEeecCCCccccCCCC----CcHHHHHHHhhcccCCCCCCCCCCChhhhHHHHHHHHhhcccCCCCCCCchhHHHHH
Q psy9184         471 -KICYYDLSQDEELFEGEG----DYQFDMYRMMRKQCQNNWQNFTPKNNVFWIHYLVDKATCLKKGYQYLRAPRHQAFEL  545 (562)
Q Consensus       471 -g~v~~~l~~~pelF~g~~----~~q~dIy~lm~~~~~~~W~~~~P~tn~~wl~yl~~~Ll~~~~~~~~~~~~~~~~~~~  545 (562)
                       ...++..|++||++.+..    ....|||++.-... ..+.+..|+...... .+...+......++... .   .-..
T Consensus       195 ~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~~l~-~l~~g~~pf~~~~~~-~~~~~~~~~~~~~~~~~-~---~~~~  268 (298)
T 2zv2_A          195 SNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLY-CFVFGQCPFMDERIM-CLHSKIKSQALEFPDQP-D---IAED  268 (298)
T ss_dssp             CCCCSCGGGCCGGGCCTTCCCEESHHHHHHHHHHHHH-HHHHSSCSSCCSSHH-HHHHHHHHCCCCCCSSS-C---CCHH
T ss_pred             cCCcCCccccChhhhccCCCCCCCchhhhHhHHHHHH-HHHHCCCCCCCccHH-HHHHHHhcccCCCCCcc-c---cCHH
Confidence             334577899999998754    45589988644332 334455555433211 22233333122232211 1   1346


Q ss_pred             HHHHHHhcCCCcCcCC
Q psy9184         546 LEELGQNALHFDSCYE  561 (562)
Q Consensus       546 l~~l~~~~l~~~s~~~  561 (562)
                      +.+|...+|..+...|
T Consensus       269 l~~li~~~l~~dp~~R  284 (298)
T 2zv2_A          269 LKDLITRMLDKNPESR  284 (298)
T ss_dssp             HHHHHHHHTCSCTTTS
T ss_pred             HHHHHHHHhhcChhhC
Confidence            7788899999887765

>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B

Probab=99.96  E-value=6.6e-29  Score=260.65  Aligned_cols=234  Identities=15%  Similarity=0.160  Sum_probs=174.6

Q ss_pred             CCCceeeeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCccccc
Q psy9184         261 SALKNCKKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTEL  334 (562)
Q Consensus       261 ~~y~~~~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~l  334 (562)
                      ++|++.+.||+|+||.||+|      +.||+|++....      ......+.+.+|+.+++.++|               
T Consensus        29 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~------~~~~~~~~~~~E~~il~~l~h---------------   87 (362)
T 2bdw_A           29 DNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKK------LSARDFQKLEREARICRKLQH---------------   87 (362)
T ss_dssp             HHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTT------CCHHHHHHHHHHHHHHHHCCC---------------
T ss_pred             cCeEEeeEEecCCCeEEEEEEECCCCCEEEEEEEEccc------CCHHHHHHHHHHHHHHHhCCC---------------
Confidence            46899999999999999999      789999998653      123455778999999999998               


Q ss_pred             ccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc---cCCHHHHHHHHHHHHHHHHH
Q psy9184         335 LKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK---YRSPNQTYAMILQVVFSLAV  411 (562)
Q Consensus       335 ~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~---~l~e~~i~~I~~QIl~aL~y  411 (562)
                                 |||++++++|.+             ++..|+|||||.||++.+.+.   .+++.+++.++.||+.||.|
T Consensus        88 -----------pnIv~~~~~~~~-------------~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~al~~  143 (362)
T 2bdw_A           88 -----------PNIVRLHDSIQE-------------ESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAY  143 (362)
T ss_dssp             -----------TTBCCEEEEEEC-------------SSEEEEEECCCCSCBHHHHHTTCSCCCHHHHHHHHHHHHHHHHH
T ss_pred             -----------CCCCeEEEEEEe-------------CCEEEEEEecCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHH
Confidence                       999999999875             568999999999998877664   38999999999999999999


Q ss_pred             HHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecCC----cEEEeecCCCccccCC-
Q psy9184         412 AEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVGE----KICYYDLSQDEELFEG-  486 (562)
Q Consensus       412 LH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~~----g~v~~~l~~~pelF~g-  486 (562)
                      ||+ .||+||||||+|||++..+.                 +..+||+|||+|+.....    +..++..|++||++.+ 
T Consensus       144 lH~-~~ivH~Dlkp~NIll~~~~~-----------------~~~~kl~DfG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~  205 (362)
T 2bdw_A          144 CHS-NGIVHRNLKPENLLLASKAK-----------------GAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKKD  205 (362)
T ss_dssp             HHH-TTCBCCCCSGGGEEESCSST-----------------TCCEEECCCTTCBCCTTCCSCCCSCSCTTTCCHHHHTTC
T ss_pred             HHH-CCeEeccCchHHEEEecCCC-----------------CCCEEEeecCcceEecCCcccccCCCCccccCHHHHccC
Confidence            999 79999999999999987642                 126999999999876542    3456788999999887 


Q ss_pred             CCCcHHHHHHHhhcccCCCCCCCCCCChhhhHHHHHHHHhhcccCCCCCCCchhHHHHHHHHHHHhcCCCcCcCC
Q psy9184         487 EGDYQFDMYRMMRKQCQNNWQNFTPKNNVFWIHYLVDKATCLKKGYQYLRAPRHQAFELLEELGQNALHFDSCYE  561 (562)
Q Consensus       487 ~~~~q~dIy~lm~~~~~~~W~~~~P~tn~~wl~yl~~~Ll~~~~~~~~~~~~~~~~~~~l~~l~~~~l~~~s~~~  561 (562)
                      ..+...|||++.-.. .....+..|+...... .+..........++..  .....-..+.+|...||..+...|
T Consensus       206 ~~~~~~DiwslG~il-~~ll~g~~Pf~~~~~~-~~~~~i~~~~~~~~~~--~~~~~~~~~~~li~~~L~~dP~~R  276 (362)
T 2bdw_A          206 PYSKPVDIWACGVIL-YILLVGYPPFWDEDQH-RLYAQIKAGAYDYPSP--EWDTVTPEAKSLIDSMLTVNPKKR  276 (362)
T ss_dssp             CCCTHHHHHHHHHHH-HHHHHSSCSSCCSSHH-HHHHHHHHTCCCCCTT--GGGGSCHHHHHHHHHHSCSSGGGS
T ss_pred             CCCchhhHHHHHHHH-HHHHHCCCCCCCCCHH-HHHHHHHhCCCCCCcc--cccCCCHHHHHHHHHHcCCChhhC
Confidence            466779998864333 2334445555332211 1222223212222221  111223467788889998887665

>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*

Probab=99.96  E-value=4.2e-29  Score=261.85  Aligned_cols=230  Identities=14%  Similarity=0.126  Sum_probs=172.4

Q ss_pred             CCCCceeeeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCcccc
Q psy9184         260 SSALKNCKKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTE  333 (562)
Q Consensus       260 ~~~y~~~~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~  333 (562)
                      .++|++.+.||+|+||.||+|      +.||||++....     .......+.+..|..+++.+.+              
T Consensus        19 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~-----~~~~~~~~~~~~E~~~l~~~~~--------------   79 (353)
T 2i0e_A           19 LTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDV-----VIQDDDVECTMVEKRVLALPGK--------------   79 (353)
T ss_dssp             CTTEEEEEEEEEETTEEEEEEEETTEEEEEEEEEEEHHH-----HHHTTCHHHHHHHHHHHTCTTC--------------
T ss_pred             hHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHH-----hhcchHHHHHHHHHHHHHhcCC--------------
Confidence            478999999999999999999      789999998642     1122345677899999988855              


Q ss_pred             cccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc---cCCHHHHHHHHHHHHHHHH
Q psy9184         334 LLKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK---YRSPNQTYAMILQVVFSLA  410 (562)
Q Consensus       334 l~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~---~l~e~~i~~I~~QIl~aL~  410 (562)
                                 ||+|++++++|.+             .+.+|+||||++||++.+.+.   .+++.+++.++.||+.||.
T Consensus        80 -----------hp~iv~l~~~~~~-------------~~~~~lv~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~  135 (353)
T 2i0e_A           80 -----------PPFLTQLHSCFQT-------------MDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLF  135 (353)
T ss_dssp             -----------CTTBCCEEEEEEC-------------SSEEEEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHH
T ss_pred             -----------CCEEeeEEEEEEc-------------CCEEEEEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHH
Confidence                       5999999999975             558999999999998877664   4899999999999999999


Q ss_pred             HHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecC-----CcEEEeecCCCccccC
Q psy9184         411 VAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVG-----EKICYYDLSQDEELFE  485 (562)
Q Consensus       411 yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~-----~g~v~~~l~~~pelF~  485 (562)
                      |||+ .||+||||||+|||++.++                    .+||+|||+|+....     ...+++..|++||++.
T Consensus       136 ~LH~-~givHrDlkp~NIll~~~g--------------------~vkL~DFG~a~~~~~~~~~~~~~~gt~~y~aPE~~~  194 (353)
T 2i0e_A          136 FLQS-KGIIYRDLKLDNVMLDSEG--------------------HIKIADFGMCKENIWDGVTTKTFCGTPDYIAPEIIA  194 (353)
T ss_dssp             HHHH-TTCBCCCCCGGGEEECTTS--------------------CEEECCCTTCBCCCCTTCCBCCCCSCGGGCCHHHHT
T ss_pred             HHHH-CCEEeccCCHHHEEEcCCC--------------------cEEEEeCCcccccccCCcccccccCCccccChhhhc
Confidence            9999 7999999999999999887                    799999999986432     2345688899999987


Q ss_pred             CC-CCcHHHHHHHhhcccCCCCCCCCCCChhhhHHHHHHHHhhcccCCCCCCCchhHHHHHHHHHHHhcCCCcCcCC
Q psy9184         486 GE-GDYQFDMYRMMRKQCQNNWQNFTPKNNVFWIHYLVDKATCLKKGYQYLRAPRHQAFELLEELGQNALHFDSCYE  561 (562)
Q Consensus       486 g~-~~~q~dIy~lm~~~~~~~W~~~~P~tn~~wl~yl~~~Ll~~~~~~~~~~~~~~~~~~~l~~l~~~~l~~~s~~~  561 (562)
                      +. .+...|+|++.-.. ...+.+..|+.... ..-+.+.++.....++..-      -..+..|...+|+.+...|
T Consensus       195 ~~~~~~~~DiwslG~il-~ell~G~~Pf~~~~-~~~~~~~i~~~~~~~p~~~------s~~~~~li~~lL~~dP~~R  263 (353)
T 2i0e_A          195 YQPYGKSVDWWAFGVLL-YEMLAGQAPFEGED-EDELFQSIMEHNVAYPKSM------SKEAVAICKGLMTKHPGKR  263 (353)
T ss_dssp             TCCBSTHHHHHHHHHHH-HHHHHSSCSSCCSS-HHHHHHHHHHCCCCCCTTS------CHHHHHHHHHHTCSCTTSC
T ss_pred             CCCcCCcccccchHHHH-HHHHcCCCCCCCCC-HHHHHHHHHhCCCCCCCCC------CHHHHHHHHHHhhcCHHHc
Confidence            64 46668998754333 23344455553222 1222333444233343321      2356677788888776655

>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*

Probab=99.96  E-value=7.2e-29  Score=258.86  Aligned_cols=230  Identities=16%  Similarity=0.167  Sum_probs=172.8

Q ss_pred             CCCceeeeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCccccc
Q psy9184         261 SALKNCKKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTEL  334 (562)
Q Consensus       261 ~~y~~~~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~l  334 (562)
                      .+|++.+.||+|+||.||+|      +.||||++....     .........+.+|+.+++.+.+               
T Consensus         9 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~-----~~~~~~~~~~~~E~~~l~~~~~---------------   68 (345)
T 3a8x_A            9 QDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKEL-----VNDDEDIDWVQTEKHVFEQASN---------------   68 (345)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGG-----SCSHHHHHHHHHHHHHHHHTTT---------------
T ss_pred             hheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEhHH-----hcchHHHHHHHHHHHHHHhcCC---------------
Confidence            57999999999999999999      789999998753     1234455678899999998843               


Q ss_pred             ccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc---cCCHHHHHHHHHHHHHHHHH
Q psy9184         335 LKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK---YRSPNQTYAMILQVVFSLAV  411 (562)
Q Consensus       335 ~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~---~l~e~~i~~I~~QIl~aL~y  411 (562)
                                ||||++++++|.+             ++.+|+||||+.||++...+.   .+++..++.++.||+.||.|
T Consensus        69 ----------hp~iv~l~~~~~~-------------~~~~~lv~e~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~  125 (345)
T 3a8x_A           69 ----------HPFLVGLHSCFQT-------------ESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNY  125 (345)
T ss_dssp             ----------CTTBCCEEEEEEC-------------SSEEEEEECCCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHH
T ss_pred             ----------CCccCeEEEEEEe-------------CCEEEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHH
Confidence                      3999999999975             568999999999998876664   49999999999999999999


Q ss_pred             HHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecC-----CcEEEeecCCCccccCC
Q psy9184         412 AEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVG-----EKICYYDLSQDEELFEG  486 (562)
Q Consensus       412 LH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~-----~g~v~~~l~~~pelF~g  486 (562)
                      ||+ .||+||||||+|||++.++                    .+||+|||+|+....     ...+++..|++||++.+
T Consensus       126 LH~-~~ivHrDlkp~NIll~~~g--------------------~~kL~DFG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~  184 (345)
T 3a8x_A          126 LHE-RGIIYRDLKLDNVLLDSEG--------------------HIKLTDYGMCKEGLRPGDTTSTFCGTPNYIAPEILRG  184 (345)
T ss_dssp             HHH-TTCBCCCCCGGGEEECTTS--------------------CEEECCGGGCBCSCCTTCCBCCCCSCGGGCCHHHHTT
T ss_pred             HHH-CCceecCCCHHHEEECCCC--------------------CEEEEeccccccccCCCCcccccCCCccccCccccCC
Confidence            999 7999999999999999886                    799999999986432     23456788999999887


Q ss_pred             C-CCcHHHHHHHhhcccCCCCCCCCCCCh--------hhhHHHHHHHHhhcccCCCCCCCchhHHHHHHHHHHHhcCCCc
Q psy9184         487 E-GDYQFDMYRMMRKQCQNNWQNFTPKNN--------VFWIHYLVDKATCLKKGYQYLRAPRHQAFELLEELGQNALHFD  557 (562)
Q Consensus       487 ~-~~~q~dIy~lm~~~~~~~W~~~~P~tn--------~~wl~yl~~~Ll~~~~~~~~~~~~~~~~~~~l~~l~~~~l~~~  557 (562)
                      . .....|+|++.-.. ...+.+..|+..        .....++.+........++..-      -..+..|...+|+.+
T Consensus       185 ~~~~~~~DiwslG~il-~ell~g~~pf~~~~~~~~~~~~~~~~~~~~i~~~~~~~p~~~------s~~~~~li~~lL~~d  257 (345)
T 3a8x_A          185 EDYGFSVDWWALGVLM-FEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIPRSL------SVKAASVLKSFLNKD  257 (345)
T ss_dssp             CCBCTHHHHHHHHHHH-HHHHHSSCTTTTTTC-------CHHHHHHHHHHCCCCCCTTS------CHHHHHHHHHHTCSS
T ss_pred             CCCChHHhHHHHHHHH-HHHHhCCCCcCCcccccccccccHHHHHHHHHcCCCCCCCCC------CHHHHHHHHHHhcCC
Confidence            4 45669998853333 233334444421        0112334444444233333221      235677788888888


Q ss_pred             CcCC
Q psy9184         558 SCYE  561 (562)
Q Consensus       558 s~~~  561 (562)
                      ...|
T Consensus       258 P~~R  261 (345)
T 3a8x_A          258 PKER  261 (345)
T ss_dssp             TTTS
T ss_pred             HhHC
Confidence            7765

>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7

Probab=99.96  E-value=6.8e-29  Score=256.00  Aligned_cols=230  Identities=13%  Similarity=0.140  Sum_probs=171.7

Q ss_pred             CCCceeeeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCccccc
Q psy9184         261 SALKNCKKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTEL  334 (562)
Q Consensus       261 ~~y~~~~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~l  334 (562)
                      ++|++.+.||+|+||.||+|      +.||+|++....         .....+.+|+.+++.++|               
T Consensus         5 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~---------~~~~~~~~E~~~l~~l~h---------------   60 (321)
T 1tki_A            5 EKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKG---------TDQVLVKKEISILNIARH---------------   60 (321)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCT---------HHHHHHHHHHHHHHHSCC---------------
T ss_pred             hceEeeeEEecCCCeEEEEEEECCCCcEEEEEEEecCc---------ccHHHHHHHHHHHHhCCC---------------
Confidence            67999999999999999999      789999997542         223567899999999998               


Q ss_pred             ccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc----cCCHHHHHHHHHHHHHHHH
Q psy9184         335 LKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK----YRSPNQTYAMILQVVFSLA  410 (562)
Q Consensus       335 ~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~----~l~e~~i~~I~~QIl~aL~  410 (562)
                                 |||++++++|.+             .+.+|+|||||.||++.+.+.    .+++.+++.++.||+.||.
T Consensus        61 -----------pnIv~~~~~~~~-------------~~~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~  116 (321)
T 1tki_A           61 -----------RNILHLHESFES-------------MEELVMIFEFISGLDIFERINTSAFELNEREIVSYVHQVCEALQ  116 (321)
T ss_dssp             -----------TTBCCEEEEEEE-------------TTEEEEEECCCCCCBHHHHHTSSSCCCCHHHHHHHHHHHHHHHH
T ss_pred             -----------CCCCeEeEEEec-------------CCEEEEEEEeCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHH
Confidence                       999999999976             558999999999998877664    3899999999999999999


Q ss_pred             HHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecCC----cEEEeecCCCccccCC
Q psy9184         411 VAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVGE----KICYYDLSQDEELFEG  486 (562)
Q Consensus       411 yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~~----g~v~~~l~~~pelF~g  486 (562)
                      |||+ .||+||||||+|||++..+.                  ..+||+|||+|+.....    ...++..|++||++.+
T Consensus       117 ~lH~-~givH~Dlkp~NIl~~~~~~------------------~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~  177 (321)
T 1tki_A          117 FLHS-HNIGHFDIRPENIIYQTRRS------------------STIKIIEFGQARQLKPGDNFRLLFTAPEYYAPEVHQH  177 (321)
T ss_dssp             HHHH-TTEECCCCCGGGEEESSSSC------------------CCEEECCCTTCEECCTTCEEEEEESCGGGSCHHHHTT
T ss_pred             HHHH-CCCCcCCCCHHHEEEccCCC------------------CCEEEEECCCCeECCCCCccccccCChhhcCcHHhcC
Confidence            9999 79999999999999987421                  17999999999987543    2345778999999887


Q ss_pred             C-CCcHHHHHHHhhcccCCCCCCCCCCChhhhHHHHHHHHhhcccCCCCCCCchhHHHHHHHHHHHhcCCCcCcCC
Q psy9184         487 E-GDYQFDMYRMMRKQCQNNWQNFTPKNNVFWIHYLVDKATCLKKGYQYLRAPRHQAFELLEELGQNALHFDSCYE  561 (562)
Q Consensus       487 ~-~~~q~dIy~lm~~~~~~~W~~~~P~tn~~wl~yl~~~Ll~~~~~~~~~~~~~~~~~~~l~~l~~~~l~~~s~~~  561 (562)
                      . .+...|||++.-. ....+.+..|+....... +...+......+..  ......-..+.+|.+.||..+...|
T Consensus       178 ~~~~~~~DiwslG~i-l~~ll~g~~pf~~~~~~~-~~~~i~~~~~~~~~--~~~~~~s~~~~~li~~~L~~dp~~R  249 (321)
T 1tki_A          178 DVVSTATDMWSLGTL-VYVLLSGINPFLAETNQQ-IIENIMNAEYTFDE--EAFKEISIEAMDFVDRLLVKERKSR  249 (321)
T ss_dssp             CEECHHHHHHHHHHH-HHHHHHSSCTTCCSSHHH-HHHHHHHTCCCCCH--HHHTTSCHHHHHHHHTTSCSSGGGS
T ss_pred             CCCCchhhHHHHHHH-HHHHHhCCCCCcCCCHHH-HHHHHHcCCCCCCh--hhhccCCHHHHHHHHHHcCCChhHC
Confidence            5 3567999886433 334444555553322122 22333331112211  0001113567788899999887765

>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}

Probab=99.96  E-value=5.8e-29  Score=268.80  Aligned_cols=235  Identities=14%  Similarity=0.157  Sum_probs=174.2

Q ss_pred             CCCceeeeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCccccc
Q psy9184         261 SALKNCKKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTEL  334 (562)
Q Consensus       261 ~~y~~~~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~l  334 (562)
                      ++|++.+.||+|+||.||+|      +.+|+|++....      ......+.+.+|+.+++.++|               
T Consensus        11 ~~Y~i~~~LG~G~fg~V~~~~~~~~~~~~a~K~i~~~~------~~~~~~~~~~~E~~il~~l~h---------------   69 (444)
T 3soa_A           11 EEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKK------LSARDHQKLEREARICRLLKH---------------   69 (444)
T ss_dssp             HHEEEEEEEEEC--CEEEEEEETTTTEEEEEEEEESCS------CHHHHHHHHHHHHHHHHHCCB---------------
T ss_pred             CCeEEEEEeccCCCeEEEEEEECCCCcEEEEEEEEccc------CCHHHHHHHHHHHHHHHhCCC---------------
Confidence            46899999999999999999      899999998753      233445678999999999998               


Q ss_pred             ccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc---cCCHHHHHHHHHHHHHHHHH
Q psy9184         335 LKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK---YRSPNQTYAMILQVVFSLAV  411 (562)
Q Consensus       335 ~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~---~l~e~~i~~I~~QIl~aL~y  411 (562)
                                 |||++++++|.+             ++..|+|||||.||++.+.+.   .+++.++..++.||+.||.|
T Consensus        70 -----------pnIv~l~~~~~~-------------~~~~~lv~E~~~gg~L~~~i~~~~~~~e~~~~~i~~qil~aL~~  125 (444)
T 3soa_A           70 -----------PNIVRLHDSISE-------------EGHHYLIFDLVTGGELFEDIVAREYYSEADASHCIQQILEAVLH  125 (444)
T ss_dssp             -----------TTBCCEEEEEEC-------------SSEEEEEECCCBCCBHHHHHHHCSCCCHHHHHHHHHHHHHHHHH
T ss_pred             -----------cCCCeEEEEEEE-------------CCEEEEEEEeCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHH
Confidence                       999999999875             568999999999998877764   48999999999999999999


Q ss_pred             HHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecC-----CcEEEeecCCCccccCC
Q psy9184         412 AEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVG-----EKICYYDLSQDEELFEG  486 (562)
Q Consensus       412 LH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~-----~g~v~~~l~~~pelF~g  486 (562)
                      ||+ .||+||||||+|||++.....                 ..+||+|||+|+....     .+..++..|++||++.+
T Consensus       126 lH~-~givHrDlKp~NIll~~~~~~-----------------~~vkL~DFG~a~~~~~~~~~~~~~~gt~~Y~APE~l~~  187 (444)
T 3soa_A          126 CHQ-MGVVHRNLKPENLLLASKLKG-----------------AAVKLADFGLAIEVEGEQQAWFGFAGTPGYLSPEVLRK  187 (444)
T ss_dssp             HHH-TTCBCCCCSSTTEEESBSSTT-----------------CCEEECCCSSCBCCCTTCCBCCCSCSCGGGCCHHHHTT
T ss_pred             HHH-CCccccCCCHHHEEEeccCCC-----------------CcEEEccCceeEEecCCCceeecccCCcccCCHHHhcC
Confidence            999 799999999999999864211                 1799999999987654     23456888999999887


Q ss_pred             C-CCcHHHHHHHhhcccCCCCCCCCCCChhhhHHHHHHHHhhcccCCCCCCCchhHHHHHHHHHHHhcCCCcCcCCC
Q psy9184         487 E-GDYQFDMYRMMRKQCQNNWQNFTPKNNVFWIHYLVDKATCLKKGYQYLRAPRHQAFELLEELGQNALHFDSCYEM  562 (562)
Q Consensus       487 ~-~~~q~dIy~lm~~~~~~~W~~~~P~tn~~wl~yl~~~Ll~~~~~~~~~~~~~~~~~~~l~~l~~~~l~~~s~~~~  562 (562)
                      . .+...|||++.-.. ...+.+..|+.+...... ...+......++.+.  ....-..+.+|...||+++...|.
T Consensus       188 ~~~~~~~DIwSlGvil-yell~G~~Pf~~~~~~~~-~~~i~~~~~~~~~~~--~~~~s~~~~~li~~~L~~dP~~Rp  260 (444)
T 3soa_A          188 DPYGKPVDLWACGVIL-YILLVGYPPFWDEDQHRL-YQQIKAGAYDFPSPE--WDTVTPEAKDLINKMLTINPSKRI  260 (444)
T ss_dssp             CCBCTHHHHHHHHHHH-HHHHHSSCSCCCSSHHHH-HHHHHHTCCCCCTTT--TTTSCHHHHHHHHHHSCSSTTTSC
T ss_pred             CCCCCccccHHHHHHH-HHHHhCCCCCCCccHHHH-HHHHHhCCCCCCccc--cccCCHHHHHHHHHHcCCChhHCC
Confidence            4 56679998864333 234445555533322222 223333122333221  111234677888899988877663

>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}

Probab=99.95  E-value=3.6e-29  Score=253.95  Aligned_cols=174  Identities=21%  Similarity=0.265  Sum_probs=144.9

Q ss_pred             CCCceeeeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCccccc
Q psy9184         261 SALKNCKKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTEL  334 (562)
Q Consensus       261 ~~y~~~~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~l  334 (562)
                      ++|++.+.||+|+||.||+|      ..||+|++....     .......+.+.+|+.+++.++|               
T Consensus        11 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-----~~~~~~~~~~~~e~~~l~~l~h---------------   70 (294)
T 4eqm_A           11 ERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPP-----REKEETLKRFEREVHNSSQLSH---------------   70 (294)
T ss_dssp             TTEEEEEEEEEETTEEEEEEEETTTCSEEEEEEEECCS-----SCCHHHHHHHHHHHHHHTTCCB---------------
T ss_pred             ccEEEEEEEccCCCEEEEEEEECCCCCeEEEEEeccCc-----cccHHHHHHHHHHHHHHhcCCC---------------
Confidence            67999999999999999999      789999997654     2334556788999999999998               


Q ss_pred             ccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc---cCCHHHHHHHHHHHHHHHHH
Q psy9184         335 LKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK---YRSPNQTYAMILQVVFSLAV  411 (562)
Q Consensus       335 ~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~---~l~e~~i~~I~~QIl~aL~y  411 (562)
                                 |||+++++++..             ++.+|+||||++||++.+.+.   .+++.+++.++.||+.||.|
T Consensus        71 -----------p~iv~~~~~~~~-------------~~~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~  126 (294)
T 4eqm_A           71 -----------QNIVSMIDVDEE-------------DDCYYLVMEYIEGPTLSEYIESHGPLSVDTAINFTNQILDGIKH  126 (294)
T ss_dssp             -----------TTBCCEEEEEEC-------------SSEEEEEEECCCSCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHH
T ss_pred             -----------CCCceEEEeeee-------------CCeEEEEEeCCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHH
Confidence                       999999998875             568999999999998776654   48999999999999999999


Q ss_pred             HHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecC------CcEEEeecCCCccccC
Q psy9184         412 AEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVG------EKICYYDLSQDEELFE  485 (562)
Q Consensus       412 LH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~------~g~v~~~l~~~pelF~  485 (562)
                      ||+ .||+||||||+|||++.++                    .+||+|||+|+....      ....++..|++||.+.
T Consensus       127 lH~-~~i~H~Dlkp~Nil~~~~~--------------------~~kl~Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE~~~  185 (294)
T 4eqm_A          127 AHD-MRIVHRDIKPQNILIDSNK--------------------TLKIFDFGIAKALSETSLTQTNHVLGTVQYFSPEQAK  185 (294)
T ss_dssp             HHH-TTCCCCCCCGGGEEECTTS--------------------CEEECCCSSSTTC-------------CCSSCCHHHHH
T ss_pred             HHH-CCcccCCCCHHHEEECCCC--------------------CEEEEeCCCccccccccccccCccccCccccCHhHhc
Confidence            999 7999999999999998886                    799999999986543      2345688899999888


Q ss_pred             CC-CCcHHHHHHHhh
Q psy9184         486 GE-GDYQFDMYRMMR  499 (562)
Q Consensus       486 g~-~~~q~dIy~lm~  499 (562)
                      +. .+...|||++.-
T Consensus       186 ~~~~~~~~Di~slG~  200 (294)
T 4eqm_A          186 GEATDECTDIYSIGI  200 (294)
T ss_dssp             TCCCCTTHHHHHHHH
T ss_pred             CCCCCchHhHHHHHH
Confidence            74 455689988543

>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}

Probab=99.95  E-value=2.2e-28  Score=259.60  Aligned_cols=230  Identities=19%  Similarity=0.261  Sum_probs=172.8

Q ss_pred             CCCCceeeeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCcccc
Q psy9184         260 SSALKNCKKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTE  333 (562)
Q Consensus       260 ~~~y~~~~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~  333 (562)
                      .++|++.+.||+|+||.||+|      +.||+|++....     .........+.+|+.+++.++|              
T Consensus        14 ~~~y~i~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~~~~-----~~~~~~~~~~~~E~~il~~l~h--------------   74 (384)
T 4fr4_A           14 FDHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQK-----CVERNEVRNVFKELQIMQGLEH--------------   74 (384)
T ss_dssp             GGGEEEEEEEECCTTCCEEEEEETTTCCEEEEEEEEHHH-----HHHTTCHHHHHHHHHHHHTCCC--------------
T ss_pred             hHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehhh-----cccHHHHHHHHHHHHHHHhCCC--------------
Confidence            367999999999999999999      789999998642     1223345678899999999998              


Q ss_pred             cccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc---cCCHHHHHHHHHHHHHHHH
Q psy9184         334 LLKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK---YRSPNQTYAMILQVVFSLA  410 (562)
Q Consensus       334 l~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~---~l~e~~i~~I~~QIl~aL~  410 (562)
                                  |||++++++|.+             .+.+|+||||+.||++...+.   .+++..++.++.||+.||.
T Consensus        75 ------------p~Iv~l~~~~~~-------------~~~~~lv~e~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~  129 (384)
T 4fr4_A           75 ------------PFLVNLWYSFQD-------------EEDMFMVVDLLLGGDLRYHLQQNVHFKEETVKLFICELVMALD  129 (384)
T ss_dssp             ------------TTBCCEEEEEEC-------------SSEEEEEECCCTTEEHHHHHHTTCCCCHHHHHHHHHHHHHHHH
T ss_pred             ------------CCCCcEEEEEEe-------------CCEEEEEEecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHH
Confidence                        999999999986             558999999999998876664   4899999999999999999


Q ss_pred             HHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecC----CcEEEeecCCCccccCC
Q psy9184         411 VAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVG----EKICYYDLSQDEELFEG  486 (562)
Q Consensus       411 yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~----~g~v~~~l~~~pelF~g  486 (562)
                      |||+ .||+||||||+|||++.++                    .+||+|||+|+....    ....++..|++||++.+
T Consensus       130 ~LH~-~givHrDlkp~NIll~~~g--------------------~vkL~DFG~a~~~~~~~~~~~~~gt~~Y~aPE~~~~  188 (384)
T 4fr4_A          130 YLQN-QRIIHRDMKPDNILLDEHG--------------------HVHITDFNIAAMLPRETQITTMAGTKPYMAPEMFSS  188 (384)
T ss_dssp             HHHH-TTEECCCCSGGGEEECTTS--------------------CEEECCCTTCEECCTTCCBCCCCSCGGGCCGGGTCC
T ss_pred             HHHH-CCceeccCcHHHeEECCCC--------------------CEEEeccceeeeccCCCceeccCCCccccCCeeecc
Confidence            9999 7999999999999999887                    799999999987653    34456888999999874


Q ss_pred             C----CCcHHHHHHHhhcccCCCCCCCCCCCh--hhhHHHHHHHHhhcccCCCCCCCchhHHHHHHHHHHHhcCCCcCcC
Q psy9184         487 E----GDYQFDMYRMMRKQCQNNWQNFTPKNN--VFWIHYLVDKATCLKKGYQYLRAPRHQAFELLEELGQNALHFDSCY  560 (562)
Q Consensus       487 ~----~~~q~dIy~lm~~~~~~~W~~~~P~tn--~~wl~yl~~~Ll~~~~~~~~~~~~~~~~~~~l~~l~~~~l~~~s~~  560 (562)
                      .    .....|||++.-... ..+.+..|+..  ......+..........++..-      -..+..|...+|..+...
T Consensus       189 ~~~~~~~~~~DiwSlG~il~-elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~p~~~------s~~~~~li~~lL~~dP~~  261 (384)
T 4fr4_A          189 RKGAGYSFAVDWWSLGVTAY-ELLRGRRPYHIRSSTSSKEIVHTFETTVVTYPSAW------SQEMVSLLKKLLEPNPDQ  261 (384)
T ss_dssp             CSSCCBCTTHHHHHHHHHHH-HHHHSSCSSCCCTTSCHHHHHHHHHHCCCCCCTTS------CHHHHHHHHHHSCSSGGG
T ss_pred             CCCCCCCccceeechHHHHH-HHHhCCCCCCCCCCccHHHHHHHHhhcccCCCCcC------CHHHHHHHHHHhcCCHhH
Confidence            2    455689988543332 33334444421  1112222333333123333322      246777888999888766


Q ss_pred             C
Q psy9184         561 E  561 (562)
Q Consensus       561 ~  561 (562)
                      |
T Consensus       262 R  262 (384)
T 4fr4_A          262 R  262 (384)
T ss_dssp             S
T ss_pred             h
Confidence            5

>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*

Probab=99.95  E-value=8.6e-29  Score=258.74  Aligned_cols=230  Identities=16%  Similarity=0.140  Sum_probs=171.7

Q ss_pred             CCCCCceeeeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhc-CCccccCCCCCCcc
Q psy9184         259 PSSALKNCKKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKET-SDLQYRTENSTPCF  331 (562)
Q Consensus       259 ~~~~y~~~~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L-~h~~~~~~n~~p~f  331 (562)
                      ..++|++.+.||+|+||.||+|      +.||||+++...     .........+..|..+++.+ +|            
T Consensus        15 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~-----~~~~~~~~~~~~E~~il~~~~~h------------   77 (345)
T 1xjd_A           15 KIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDV-----VLMDDDVECTMVEKRVLSLAWEH------------   77 (345)
T ss_dssp             -CTTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHH-----HHHTTCHHHHHHHHHHHHHHTTC------------
T ss_pred             ChHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhHH-----hhhhhhHHHHHHHHHHHHhcCCC------------
Confidence            3478999999999999999999      789999998642     11223346678899999887 55            


Q ss_pred             cccccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc---cCCHHHHHHHHHHHHHH
Q psy9184         332 TELLKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK---YRSPNQTYAMILQVVFS  408 (562)
Q Consensus       332 v~l~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~---~l~e~~i~~I~~QIl~a  408 (562)
                                    |||++++++|.+             .+.+|+||||+.||++.+.+.   .+++.+++.++.||+.|
T Consensus        78 --------------p~iv~l~~~~~~-------------~~~~~lv~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~a  130 (345)
T 1xjd_A           78 --------------PFLTHMFCTFQT-------------KENLFFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILG  130 (345)
T ss_dssp             --------------TTBCCEEEEEEC-------------SSEEEEEEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHH
T ss_pred             --------------CCCCcEEEEEEe-------------CCEEEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHH
Confidence                          999999999976             558999999999998877664   48999999999999999


Q ss_pred             HHHHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecC-----CcEEEeecCCCccc
Q psy9184         409 LAVAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVG-----EKICYYDLSQDEEL  483 (562)
Q Consensus       409 L~yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~-----~g~v~~~l~~~pel  483 (562)
                      |.|||+ .||+||||||+|||++.++                    .+||+|||+|+....     ...+++..|++||+
T Consensus       131 L~~LH~-~~ivHrDlkp~NIll~~~g--------------------~vkL~DFG~a~~~~~~~~~~~~~~gt~~y~aPE~  189 (345)
T 1xjd_A          131 LQFLHS-KGIVYRDLKLDNILLDKDG--------------------HIKIADFGMCKENMLGDAKTNTFCGTPDYIAPEI  189 (345)
T ss_dssp             HHHHHH-TTCBCCCCCGGGEEECTTS--------------------CEEECCCTTCBCCCCTTCCBCCCCSCGGGCCHHH
T ss_pred             HHHHHH-CCeEeCCCChhhEEECCCC--------------------CEEEeEChhhhhcccCCCcccCCCCCcccCChhh
Confidence            999999 7999999999999999886                    799999999986432     23456788999999


Q ss_pred             cCCC-CCcHHHHHHHhhcccCCCCCCCCCCChhhhHHHHHHHHhhcccCCCCCCCchhHHHHHHHHHHHhcCCCcCcCC
Q psy9184         484 FEGE-GDYQFDMYRMMRKQCQNNWQNFTPKNNVFWIHYLVDKATCLKKGYQYLRAPRHQAFELLEELGQNALHFDSCYE  561 (562)
Q Consensus       484 F~g~-~~~q~dIy~lm~~~~~~~W~~~~P~tn~~wl~yl~~~Ll~~~~~~~~~~~~~~~~~~~l~~l~~~~l~~~s~~~  561 (562)
                      +.+. .+...|+|++.-. ......+..|+.... ..-+...+......++..-      -..+..|..++|+.+...|
T Consensus       190 ~~~~~~~~~~DiwslG~i-l~ell~g~~Pf~~~~-~~~~~~~i~~~~~~~p~~~------s~~~~~li~~lL~~dp~~R  260 (345)
T 1xjd_A          190 LLGQKYNHSVDWWSFGVL-LYEMLIGQSPFHGQD-EEELFHSIRMDNPFYPRWL------EKEAKDLLVKLFVREPEKR  260 (345)
T ss_dssp             HTTCCBCTHHHHHHHHHH-HHHHHHSSCSSCCSS-HHHHHHHHHHCCCCCCTTS------CHHHHHHHHHHSCSSGGGS
T ss_pred             hcCCCCCChhhhHHHHHH-HHHHhcCCCCCCCCC-HHHHHHHHHhCCCCCCccc------CHHHHHHHHHHhcCCHhHc
Confidence            8874 4667999885433 333444555553322 1222333333122333221      2356778888888776655

>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*

Probab=99.95  E-value=1.7e-28  Score=253.08  Aligned_cols=229  Identities=18%  Similarity=0.171  Sum_probs=164.8

Q ss_pred             CCCceeeeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCccccc
Q psy9184         261 SALKNCKKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTEL  334 (562)
Q Consensus       261 ~~y~~~~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~l  334 (562)
                      ++|++.+.||+|+||.||+|      +.||||++.....       ....+.+.+|+.+++.++|               
T Consensus         7 ~~y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~-------~~~~~~~~~E~~~l~~l~h---------------   64 (323)
T 3tki_A            7 EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRA-------VDCPENIKKEICINKMLNH---------------   64 (323)
T ss_dssp             TCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC--------------CHHHHHHHHHHCCC---------------
T ss_pred             hhceeeeEEecCCCEEEEEEEECCCCcEEEEEEEEcccc-------cchHHHHHHHHHHHHhCCC---------------
Confidence            67999999999999999999      7899999976531       2223567899999999998               


Q ss_pred             ccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc---cCCHHHHHHHHHHHHHHHHH
Q psy9184         335 LKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK---YRSPNQTYAMILQVVFSLAV  411 (562)
Q Consensus       335 ~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~---~l~e~~i~~I~~QIl~aL~y  411 (562)
                                 |||+++++++.+             ++..|+|||||.||++.+.+.   .+++.+++.++.||+.||.|
T Consensus        65 -----------pnIv~~~~~~~~-------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~  120 (323)
T 3tki_A           65 -----------ENVVKFYGHRRE-------------GNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVY  120 (323)
T ss_dssp             -----------TTBCCEEEEEEC-------------SSEEEEEEECCTTEEGGGGSBTTTBCCHHHHHHHHHHHHHHHHH
T ss_pred             -----------CCCCeEEEEEec-------------CCeEEEEEEcCCCCcHHHHHhhcCCCCHHHHHHHHHHHHHHHHH
Confidence                       999999998875             568999999999998877775   48999999999999999999


Q ss_pred             HHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecC-------CcEEEeecCCCcccc
Q psy9184         412 AEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVG-------EKICYYDLSQDEELF  484 (562)
Q Consensus       412 LH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~-------~g~v~~~l~~~pelF  484 (562)
                      ||+ .||+||||||+|||++.++                    .+||+|||+|+....       ....++..|++||++
T Consensus       121 LH~-~givH~Dlkp~NIll~~~~--------------------~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~  179 (323)
T 3tki_A          121 LHG-IGITHRDIKPENLLLDERD--------------------NLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELL  179 (323)
T ss_dssp             HHH-TTEECSCCSGGGEEECTTC--------------------CEEECCCTTCEECEETTEECCBCSCCSCGGGSCHHHH
T ss_pred             HHH-CCccccccchHHEEEeCCC--------------------CEEEEEeeccceeccCCcccccCCCccCcCccCcHHh
Confidence            999 7999999999999999886                    799999999986542       234567789999998


Q ss_pred             CCCC--CcHHHHHHHhhcccCCCCCCCCCCChhhhHHHHHHHHhhcccCCCCCCCchhHHHHHHHHHHHhcCCCcCcCC
Q psy9184         485 EGEG--DYQFDMYRMMRKQCQNNWQNFTPKNNVFWIHYLVDKATCLKKGYQYLRAPRHQAFELLEELGQNALHFDSCYE  561 (562)
Q Consensus       485 ~g~~--~~q~dIy~lm~~~~~~~W~~~~P~tn~~wl~yl~~~Ll~~~~~~~~~~~~~~~~~~~l~~l~~~~l~~~s~~~  561 (562)
                      .+..  ....|||++.-... ..+.+..|+....-.......... ...+...   ....-..+.+|..+||.++...|
T Consensus       180 ~~~~~~~~~~DiwslG~il~-~ll~g~~pf~~~~~~~~~~~~~~~-~~~~~~~---~~~~~~~~~~li~~~L~~dP~~R  253 (323)
T 3tki_A          180 KRREFHAEPVDVWSCGIVLT-AMLAGELPWDQPSDSCQEYSDWKE-KKTYLNP---WKKIDSAPLALLHKILVENPSAR  253 (323)
T ss_dssp             HCSSBCHHHHHHHHHHHHHH-HHHHSSCSCSSSCTTSHHHHHHHT-TCTTSTT---GGGSCHHHHHHHHHHSCSSTTTS
T ss_pred             ccCCCCCCcccHHHHHHHHH-HHHhCCCCCCCCchHHHHHHHHhc-ccccCCc---cccCCHHHHHHHHHHccCChhhC
Confidence            7754  34589988644332 222233333211000000111122 1111111   11123456678888888887765

>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*

Probab=99.95  E-value=3.2e-28  Score=264.11  Aligned_cols=179  Identities=20%  Similarity=0.277  Sum_probs=141.9

Q ss_pred             CCCceeeeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCccccc
Q psy9184         261 SALKNCKKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTEL  334 (562)
Q Consensus       261 ~~y~~~~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~l  334 (562)
                      ++|++++.||+|+||.||+|      +.||||++....      ........+.+|+.+++.++|               
T Consensus        62 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~------~~~~~~~~~~~E~~~l~~l~h---------------  120 (464)
T 3ttj_A           62 KRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPF------QNQTHAKRAYRELVLMKCVNH---------------  120 (464)
T ss_dssp             TTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEESGG------GSHHHHHHHHHHHHHHHHCCC---------------
T ss_pred             CCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEECccc------cChHHHHHHHHHHHHHHhCCC---------------
Confidence            67999999999999999999      789999998642      234556788999999999998               


Q ss_pred             ccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc-cCCHHHHHHHHHHHHHHHHHHH
Q psy9184         335 LKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK-YRSPNQTYAMILQVVFSLAVAE  413 (562)
Q Consensus       335 ~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~-~l~e~~i~~I~~QIl~aL~yLH  413 (562)
                                 |||++++++|....       .......+|+||||+.++ ++..+. .+++.+++.++.||+.||+|||
T Consensus       121 -----------pnIv~l~~~~~~~~-------~~~~~~~~~lv~E~~~~~-l~~~~~~~l~~~~~~~~~~qil~aL~~lH  181 (464)
T 3ttj_A          121 -----------KNIISLLNVFTPQK-------TLEEFQDVYLVMELMDAN-LCQVIQMELDHERMSYLLYQMLCGIKHLH  181 (464)
T ss_dssp             -----------TTBCCCSEEECSCC-------STTTCCEEEEEEECCSEE-HHHHHTSCCCHHHHHHHHHHHHHHHHHHH
T ss_pred             -----------CCCCcEEEEEccCC-------ccccCCeEEEEEeCCCCC-HHHHHhhcCCHHHHHHHHHHHHHHHHHHH
Confidence                       99999999886522       111235789999999865 544443 4899999999999999999999


Q ss_pred             hhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecC----CcEEEeecCCCccccCC-CC
Q psy9184         414 VELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVG----EKICYYDLSQDEELFEG-EG  488 (562)
Q Consensus       414 ~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~----~g~v~~~l~~~pelF~g-~~  488 (562)
                      + .||+||||||+|||++.++                    .+||+|||+|+....    ...+++..|++||++.+ .+
T Consensus       182 ~-~~iiHrDlkp~NIll~~~~--------------------~~kl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~  240 (464)
T 3ttj_A          182 S-AGIIHRDLKPSNIVVKSDC--------------------TLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGY  240 (464)
T ss_dssp             H-TTCCCCCCCGGGEEECTTS--------------------CEEECCCCCC-----CCCC----CCCTTCCHHHHTTCCC
T ss_pred             H-CCcccCCCChHhEEEeCCC--------------------CEEEEEEEeeeecCCCcccCCCcccccccCHHHHcCCCC
Confidence            9 7999999999999999886                    799999999987654    33566888999999887 45


Q ss_pred             CcHHHHHHHhhc
Q psy9184         489 DYQFDMYRMMRK  500 (562)
Q Consensus       489 ~~q~dIy~lm~~  500 (562)
                      +...|||++.-.
T Consensus       241 ~~~~DiwSlG~i  252 (464)
T 3ttj_A          241 KENVDIWSVGCI  252 (464)
T ss_dssp             CTTHHHHHHHHH
T ss_pred             CHHHHHHHHHHH
Confidence            666999886433

>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*

Probab=99.95  E-value=2.1e-28  Score=257.36  Aligned_cols=239  Identities=16%  Similarity=0.146  Sum_probs=173.7

Q ss_pred             CCCceeeeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCccccc
Q psy9184         261 SALKNCKKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTEL  334 (562)
Q Consensus       261 ~~y~~~~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~l  334 (562)
                      ++|++.+.||+|+||.||+|      +.||+|++.........  .....+.+.+|+.+++.++|               
T Consensus        12 ~~y~~~~~LG~G~fg~V~~~~~~~~~~~~avK~i~~~~~~~~~--~~~~~~~~~~E~~il~~l~h---------------   74 (361)
T 2yab_A           12 DFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASR--RGVCREEIEREVSILRQVLH---------------   74 (361)
T ss_dssp             GTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEBCSSTTCS--SSBCHHHHHHHHHHHTTCCC---------------
T ss_pred             hceEEeeEEeeCcCEEEEEEEECCCCCEEEEEEEEcccccccc--chhHHHHHHHHHHHHHhCCC---------------
Confidence            67999999999999999999      78999999876421110  11124578899999999998               


Q ss_pred             ccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc---cCCHHHHHHHHHHHHHHHHH
Q psy9184         335 LKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK---YRSPNQTYAMILQVVFSLAV  411 (562)
Q Consensus       335 ~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~---~l~e~~i~~I~~QIl~aL~y  411 (562)
                                 |||++++++|.+             .+.+|+||||+.||++.+.+.   .+++.+++.++.||+.||.|
T Consensus        75 -----------pnIv~l~~~~~~-------------~~~~~lv~e~~~gg~L~~~l~~~~~l~~~~~~~i~~qi~~aL~~  130 (361)
T 2yab_A           75 -----------PNIITLHDVYEN-------------RTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNY  130 (361)
T ss_dssp             -----------TTBCCEEEEEEC-------------SSEEEEEEECCCSCBHHHHHTTCSCCBHHHHHHHHHHHHHHHHH
T ss_pred             -----------cCCCcEEEEEEe-------------CCEEEEEEEcCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHH
Confidence                       999999999975             558999999999998877764   38999999999999999999


Q ss_pred             HHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecC----CcEEEeecCCCccccCC-
Q psy9184         412 AEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVG----EKICYYDLSQDEELFEG-  486 (562)
Q Consensus       412 LH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~----~g~v~~~l~~~pelF~g-  486 (562)
                      ||+ .||+||||||+|||++..+...                ..+||+|||+|+....    ...+++..|++||++.+ 
T Consensus       131 LH~-~givHrDlkp~NIll~~~~~~~----------------~~vkl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~  193 (361)
T 2yab_A          131 LHT-KKIAHFDLKPENIMLLDKNIPI----------------PHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIVNYE  193 (361)
T ss_dssp             HHH-TTEECCCCSGGGEEESCTTSSS----------------CCEEECCCSSCEECCTTCCCCCCCSCGGGCCHHHHTTC
T ss_pred             HHH-CCcccCCCCHHHEEEeCCCCCc----------------cCEEEEecCCceEcCCCCccccCCCCccEECchHHcCC
Confidence            999 7999999999999998765210                1699999999988654    23456788999999887 


Q ss_pred             CCCcHHHHHHHhhcccCCCCCCCCCCChhhhHHHHHHHHhhcccCCCCCCCchhHHHHHHHHHHHhcCCCcCcCC
Q psy9184         487 EGDYQFDMYRMMRKQCQNNWQNFTPKNNVFWIHYLVDKATCLKKGYQYLRAPRHQAFELLEELGQNALHFDSCYE  561 (562)
Q Consensus       487 ~~~~q~dIy~lm~~~~~~~W~~~~P~tn~~wl~yl~~~Ll~~~~~~~~~~~~~~~~~~~l~~l~~~~l~~~s~~~  561 (562)
                      ..+...|||++.- .....+.+..|+....-.. +...+......|+..  .....-..++.|...||+.+...|
T Consensus       194 ~~~~~~DiwslGv-il~~ll~g~~Pf~~~~~~~-~~~~i~~~~~~~~~~--~~~~~s~~~~~li~~~L~~dP~~R  264 (361)
T 2yab_A          194 PLGLEADMWSIGV-ITYILLSGASPFLGDTKQE-TLANITAVSYDFDEE--FFSQTSELAKDFIRKLLVKETRKR  264 (361)
T ss_dssp             CCCTHHHHHHHHH-HHHHHHHSCCSSCCSSHHH-HHHHHHTTCCCCCHH--HHTTSCHHHHHHHHHHSCSSTTTS
T ss_pred             CCCccccHHHHHH-HHHHHHhCCCCCCCCCHHH-HHHHHHhcCCCCCch--hccCCCHHHHHHHHHHCCCChhHC
Confidence            4566799988643 3334444555553322111 122222212222210  000113467788888888887765

>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}

Probab=99.95  E-value=2.4e-28  Score=249.94  Aligned_cols=240  Identities=14%  Similarity=0.096  Sum_probs=172.1

Q ss_pred             CCCCceeeeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCcccc
Q psy9184         260 SSALKNCKKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTE  333 (562)
Q Consensus       260 ~~~y~~~~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~  333 (562)
                      .++|++.+.||+|+||.||+|      +.||||++....       .....+.+.+|+.+++.++|              
T Consensus         8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-------~~~~~~~~~~E~~~l~~l~h--------------   66 (319)
T 4euu_A            8 NHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNIS-------FLRPVDVQMREFEVLKKLNH--------------   66 (319)
T ss_dssp             SEEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGG-------GGSCHHHHHHHHHHHHHCCC--------------
T ss_pred             CCCEEEEEEecCCCCeEEEEEEECCCCcEEEEEEecccc-------ccchHHHHHHHHHHHHhcCC--------------
Confidence            367999999999999999999      789999998542       12234567899999999998              


Q ss_pred             cccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCcccccc------CCHHHHHHHHHHHHH
Q psy9184         334 LLKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIKY------RSPNQTYAMILQVVF  407 (562)
Q Consensus       334 l~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~~------l~e~~i~~I~~QIl~  407 (562)
                                  |||+++++++....           ....|+||||++||++.+.+..      +++.+++.++.||+.
T Consensus        67 ------------~~iv~~~~~~~~~~-----------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~  123 (319)
T 4euu_A           67 ------------KNIVKLFAIEEETT-----------TRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVG  123 (319)
T ss_dssp             ------------TTBCCEEEEEECTT-----------TCCEEEEEECCTTCBHHHHHHSGGGTTCCCHHHHHHHHHHHHH
T ss_pred             ------------CCcceEEEEeecCC-----------CceEEEEEeCCCCCCHHHHHHHhccccCCCHHHHHHHHHHHHH
Confidence                        99999998886522           4478999999999988766643      899999999999999


Q ss_pred             HHHHHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecCC----cEEEeecCCCccc
Q psy9184         408 SLAVAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVGE----KICYYDLSQDEEL  483 (562)
Q Consensus       408 aL~yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~~----g~v~~~l~~~pel  483 (562)
                      ||.|||+ .||+||||||+|||+......                ...+||+|||+|+.....    ...++..|++||+
T Consensus       124 ~L~~LH~-~~ivH~Dlkp~NIll~~~~~~----------------~~~~kL~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~  186 (319)
T 4euu_A          124 GMNHLRE-NGIVHRNIKPGNIMRVIGEDG----------------QSVYKLTDFGAARELEDDEQFVSLYGTEEYLHPDM  186 (319)
T ss_dssp             HHHHHHH-TTEECSCCSGGGEEEEECTTS----------------CEEEEECCCTTCEECCTTCCBCCCCSCGGGCCHHH
T ss_pred             HHHHHHH-CCEecCCCCHHHEEEeccCCC----------------CceEEEccCCCceecCCCCceeecccCCCccCHHH
Confidence            9999999 799999999999998332110                027999999999886542    3346778999998


Q ss_pred             cC---------CCCCcHHHHHHHhhcccCCCCCCCCCC---ChhhhHHHHHHHHhhccc--------------------C
Q psy9184         484 FE---------GEGDYQFDMYRMMRKQCQNNWQNFTPK---NNVFWIHYLVDKATCLKK--------------------G  531 (562)
Q Consensus       484 F~---------g~~~~q~dIy~lm~~~~~~~W~~~~P~---tn~~wl~yl~~~Ll~~~~--------------------~  531 (562)
                      +.         .......|||++.-... ..+.+..|+   .+......+..+++. +.                    .
T Consensus       187 ~~~~~~~~~~~~~~~~~~DiwslG~il~-el~~g~~pf~~~~~~~~~~~~~~~~~~-~~p~~~~~~~~~~~~~~~~~~~~  264 (319)
T 4euu_A          187 YERAVLRKDHQKKYGATVDLWSIGVTFY-HAATGSLPFRPFEGPRRNKEVMYKIIT-GKPSGAISGVQKAENGPIDWSGD  264 (319)
T ss_dssp             HHHHTSCCCCCCCBCTTHHHHHHHHHHH-HHHHSSCSEECTTCGGGCHHHHHHHHH-HCCTTCCEEEECSTTCCEEEESS
T ss_pred             hhhccccccccCCCCcHHHHHHHHHHHH-HHHhCCCCCCCCCccchhHHHHHHHhc-CCCcccchhhhcccCCccccCcc
Confidence            75         34556699988644433 222233333   111112223333333 11                    1


Q ss_pred             CCCCCCchhHHHHHHHHHHHhcCCCcCcCCC
Q psy9184         532 YQYLRAPRHQAFELLEELGQNALHFDSCYEM  562 (562)
Q Consensus       532 ~~~~~~~~~~~~~~l~~l~~~~l~~~s~~~~  562 (562)
                      ++.........-..+..|.+.||.++...|+
T Consensus       265 ~~~~~~~~~~~~~~l~~ll~~~L~~dP~~R~  295 (319)
T 4euu_A          265 MPVSCSLSRGLQVLLTPVLANILEADQEKCW  295 (319)
T ss_dssp             CCTTCSSCHHHHHHHHHHHHHHSCCCTTTSC
T ss_pred             CCcccccchhHHHHhHHHHHHhccCChhhhc
Confidence            2222222234477888899999999988764

>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*

Probab=99.95  E-value=3.3e-28  Score=249.29  Aligned_cols=176  Identities=19%  Similarity=0.257  Sum_probs=141.4

Q ss_pred             CCCCCceeeeeeccCceEEEEE----eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCccccc
Q psy9184         259 PSSALKNCKKIGEGVYGEVFKL----NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTEL  334 (562)
Q Consensus       259 ~~~~y~~~~~LG~GsfG~Vyka----~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~l  334 (562)
                      +.++|++.+.||+|+||.||+|    ..||||++....      ......+.+.+|+.+++.++|               
T Consensus        35 ~~~~y~i~~~lG~G~~g~V~~~~~~~~~vavK~~~~~~------~~~~~~~~~~~E~~~l~~l~h---------------   93 (309)
T 3p86_A           35 PWCDLNIKEKIGAGSFGTVHRAEWHGSDVAVKILMEQD------FHAERVNEFLREVAIMKRLRH---------------   93 (309)
T ss_dssp             CGGGEEEEEEEEECSSEEEEEEEETTEEEEEEEECCCC------CSHHHHHHHHHHHHHHHHCCC---------------
T ss_pred             ChhHceeeeEeecCCCeEEEEEEECCCcEEEEEecCCC------CCHHHHHHHHHHHHHHHhCCC---------------
Confidence            3467999999999999999999    899999998653      234455778999999999998               


Q ss_pred             ccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCcccccc------CCHHHHHHHHHHHHHH
Q psy9184         335 LKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIKY------RSPNQTYAMILQVVFS  408 (562)
Q Consensus       335 ~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~~------l~e~~i~~I~~QIl~a  408 (562)
                                 |||+++++++.+             .+.+|+||||+.||++.+.+..      +++..++.++.||+.|
T Consensus        94 -----------p~iv~~~~~~~~-------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~a  149 (309)
T 3p86_A           94 -----------PNIVLFMGAVTQ-------------PPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKG  149 (309)
T ss_dssp             -----------TTBCCEEEEECS-------------TTCCEEEEECCTTCBHHHHHHSTTHHHHSCHHHHHHHHHHHHHH
T ss_pred             -----------CCEeeEEEEEEE-------------CCceEEEEecCCCCcHHHHHhhcCCCCCCCHHHHHHHHHHHHHH
Confidence                       999999998875             4578999999999988766642      8999999999999999


Q ss_pred             HHHHHhhCC--eEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecC-----CcEEEeecCCCc
Q psy9184         409 LAVAEVELE--FEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVG-----EKICYYDLSQDE  481 (562)
Q Consensus       409 L~yLH~~~~--IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~-----~g~v~~~l~~~p  481 (562)
                      |+|||+ .|  |+||||||+|||++.++                    .+||+|||+|+....     ....++..|++|
T Consensus       150 L~~LH~-~~~~ivH~Dikp~NIll~~~~--------------------~~kL~Dfg~a~~~~~~~~~~~~~~gt~~y~aP  208 (309)
T 3p86_A          150 MNYLHN-RNPPIVHRNLKSPNLLVDKKY--------------------TVKVCDFGLSRLKASTFLSSKSAAGTPEWMAP  208 (309)
T ss_dssp             HHHHHT-SSSCCCCTTCCGGGEEECTTC--------------------CEEECCCC-----------------CCTTSCH
T ss_pred             HHHHHc-CCCCEECCCCChhhEEEeCCC--------------------cEEECCCCCCccccccccccccCCCCccccCh
Confidence            999999 79  99999999999998886                    799999999986543     245568889999


Q ss_pred             cccCCC-CCcHHHHHHHhhc
Q psy9184         482 ELFEGE-GDYQFDMYRMMRK  500 (562)
Q Consensus       482 elF~g~-~~~q~dIy~lm~~  500 (562)
                      |++.+. .+...|||++.-.
T Consensus       209 E~~~~~~~~~~~DiwslG~i  228 (309)
T 3p86_A          209 EVLRDEPSNEKSDVYSFGVI  228 (309)
T ss_dssp             HHHTTCCCCTTHHHHHHHHH
T ss_pred             hhhcCCCCCchhhHHHHHHH
Confidence            998874 5566899886443

>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*

Probab=99.95  E-value=1.9e-28  Score=253.78  Aligned_cols=177  Identities=21%  Similarity=0.255  Sum_probs=144.8

Q ss_pred             CCCCCCceeeeeeccCceEEEEE-----------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCC
Q psy9184         258 YPSSALKNCKKIGEGVYGEVFKL-----------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTEN  326 (562)
Q Consensus       258 ~~~~~y~~~~~LG~GsfG~Vyka-----------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n  326 (562)
                      ++.++|++.+.||+|+||.||+|           +.||||++....       .....+.+.+|+.+++.+.+       
T Consensus        19 ~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~-------~~~~~~~~~~E~~~l~~l~~-------   84 (359)
T 3vhe_A           19 FPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGA-------THSEHRALMSELKILIHIGH-------   84 (359)
T ss_dssp             CCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTC-------CHHHHHHHHHHHHHHHHHCC-------
T ss_pred             ccccceeeceeecCCCCceEEEEEeccccccccceEEEEEEecCcC-------CHHHHHHHHHHHHHHHhhcC-------
Confidence            35578999999999999999999           579999998643       23445678999999999965       


Q ss_pred             CCCcccccccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCcccccc--------------
Q psy9184         327 STPCFTELLKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIKY--------------  392 (562)
Q Consensus       327 ~~p~fv~l~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~~--------------  392 (562)
                                        ||||+++++++.+            .+..+|+|||||.||++.+.+..              
T Consensus        85 ------------------hpniv~~~~~~~~------------~~~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~  134 (359)
T 3vhe_A           85 ------------------HLNVVNLLGACTK------------PGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGAR  134 (359)
T ss_dssp             ------------------CTTBCCEEEEECS------------TTSCCEEEEECCTTEEHHHHHHTTTTSBCSCC-----
T ss_pred             ------------------Ccceeeeeeeeec------------CCCceEEEEEecCCCcHHHHHHhccccccccccccch
Confidence                              5999999998865            23458999999999987655421              


Q ss_pred             -------------------------------------------------------CCHHHHHHHHHHHHHHHHHHHhhCC
Q psy9184         393 -------------------------------------------------------RSPNQTYAMILQVVFSLAVAEVELE  417 (562)
Q Consensus       393 -------------------------------------------------------l~e~~i~~I~~QIl~aL~yLH~~~~  417 (562)
                                                                             +++..++.++.||+.||.|||+ .|
T Consensus       135 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~LH~-~~  213 (359)
T 3vhe_A          135 FRQGKDYVGAIPVDLKRRLDSITSSQSSASSGFVEEKSLSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFLAS-RK  213 (359)
T ss_dssp             -------------------------------------------------CTTTTCBCHHHHHHHHHHHHHHHHHHHH-TT
T ss_pred             hhcccccccccchhhhccccccCccccccccccccccccchhhhcccccchhccccCHHHHHHHHHHHHHHHHHHHH-CC
Confidence                                                                   7889999999999999999999 79


Q ss_pred             eEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecC-------CcEEEeecCCCccccCC-CCC
Q psy9184         418 FEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVG-------EKICYYDLSQDEELFEG-EGD  489 (562)
Q Consensus       418 IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~-------~g~v~~~l~~~pelF~g-~~~  489 (562)
                      |+||||||+|||++.++                    .+||+|||+|+....       ....++..|++||++.+ ..+
T Consensus       214 ivH~Dikp~NIll~~~~--------------------~~kl~Dfg~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~  273 (359)
T 3vhe_A          214 CIHRDLAARNILLSEKN--------------------VVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYT  273 (359)
T ss_dssp             CCCSCCSGGGEEECGGG--------------------CEEECCCGGGSCTTSCTTCEEC--CEECGGGCCHHHHHHCCCC
T ss_pred             cccCCCChhhEEEcCCC--------------------cEEEEeccceeeecccccchhccccCCCceeEChhhhcCCCCC
Confidence            99999999999998876                    799999999986532       33455667999998765 456


Q ss_pred             cHHHHHHHhh
Q psy9184         490 YQFDMYRMMR  499 (562)
Q Consensus       490 ~q~dIy~lm~  499 (562)
                      ...|||++.-
T Consensus       274 ~~~Di~slG~  283 (359)
T 3vhe_A          274 IQSDVWSFGV  283 (359)
T ss_dssp             HHHHHHHHHH
T ss_pred             chhhhhhHHH
Confidence            6799988643

>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*

Probab=99.95  E-value=1e-28  Score=266.54  Aligned_cols=230  Identities=15%  Similarity=0.139  Sum_probs=168.6

Q ss_pred             CCCCCceeeeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCccc
Q psy9184         259 PSSALKNCKKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFT  332 (562)
Q Consensus       259 ~~~~y~~~~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv  332 (562)
                      ..++|++.++||+|+||.||+|      +.||+|++....     .........+.+|+.+++.++|             
T Consensus        72 ~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~~~~~~-----~~~~~~~~~~~~E~~il~~~~h-------------  133 (437)
T 4aw2_A           72 HREDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWE-----MLKRAETACFREERDVLVNGDS-------------  133 (437)
T ss_dssp             CGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHH-----HHHTTTTCCHHHHHHHHHHSCT-------------
T ss_pred             ChhheEEEEEEEeCCCEEEEEEEEcCCCcEEEEEEEEHHH-----hhhHHHHHHHHHHHHHHHhCCC-------------
Confidence            3478999999999999999999      789999998532     1111222347889999999988             


Q ss_pred             ccccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc----cCCHHHHHHHHHHHHHH
Q psy9184         333 ELLKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK----YRSPNQTYAMILQVVFS  408 (562)
Q Consensus       333 ~l~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~----~l~e~~i~~I~~QIl~a  408 (562)
                                   |||++++++|.+             ++.+|+|||||.||++.+.+.    .+++..++.++.||+.|
T Consensus       134 -------------p~Iv~l~~~~~~-------------~~~~~lV~Ey~~gg~L~~~l~~~~~~l~e~~~~~~~~qi~~a  187 (437)
T 4aw2_A          134 -------------KWITTLHYAFQD-------------DNNLYLVMDYYVGGDLLTLLSKFEDRLPEEMARFYLAEMVIA  187 (437)
T ss_dssp             -------------TTBCCEEEEEEC-------------SSEEEEEECCCTTCBHHHHHHTTTTCCCHHHHHHHHHHHHHH
T ss_pred             -------------CCEEEEEEEEee-------------CCEEEEEEecCCCCcHHHHHHHccCCCCHHHHHHHHHHHHHH
Confidence                         999999999986             568999999999998877663    48999999999999999


Q ss_pred             HHHHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecCC------cEEEeecCCCcc
Q psy9184         409 LAVAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVGE------KICYYDLSQDEE  482 (562)
Q Consensus       409 L~yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~~------g~v~~~l~~~pe  482 (562)
                      |.|||+ .||+||||||+|||++.++                    .+||+|||+|+.....      ..+++..|++||
T Consensus       188 L~~LH~-~giiHrDLKp~NILl~~~g--------------------~vkL~DFGla~~~~~~~~~~~~~~~GT~~Y~APE  246 (437)
T 4aw2_A          188 IDSVHQ-LHYVHRDIKPDNILMDMNG--------------------HIRLADFGSCLKLMEDGTVQSSVAVGTPDYISPE  246 (437)
T ss_dssp             HHHHHH-TTEECCCCSGGGEEECTTS--------------------CEEECCCTTCEECCTTSCEECCSCCSCGGGCCHH
T ss_pred             HHHHHh-CCeEecccCHHHeeEcCCC--------------------CEEEcchhhhhhcccCCCcccccccCCcCeeChH
Confidence            999999 7999999999999999887                    7999999999876542      245688899999


Q ss_pred             ccC------CCCCcHHHHHHHhhcccCCCCCCCCCCChhhhHHHHHHHHhhc--ccCCCCCCCchhHHHHHHHHHHHhcC
Q psy9184         483 LFE------GEGDYQFDMYRMMRKQCQNNWQNFTPKNNVFWIHYLVDKATCL--KKGYQYLRAPRHQAFELLEELGQNAL  554 (562)
Q Consensus       483 lF~------g~~~~q~dIy~lm~~~~~~~W~~~~P~tn~~wl~yl~~~Ll~~--~~~~~~~~~~~~~~~~~l~~l~~~~l  554 (562)
                      ++.      +..+...|||++.- .......+..|+...-... +..+++..  ...++......   -..++.|.++||
T Consensus       247 ~l~~~~~~~~~~~~~~DvwSlGv-il~elltG~~Pf~~~~~~~-~~~~i~~~~~~~~~p~~~~~~---s~~~~dLi~~lL  321 (437)
T 4aw2_A          247 ILQAMEGGKGRYGPECDWWSLGV-CMYEMLYGETPFYAESLVE-TYGKIMNHKERFQFPTQVTDV---SENAKDLIRRLI  321 (437)
T ss_dssp             HHHHHHTSCCEECTHHHHHHHHH-HHHHHHHSSCTTCCSSHHH-HHHHHHTHHHHCCCCSSCCCS---CHHHHHHHHTTS
T ss_pred             HHhhcccCCCCCCCcCeeHHHHH-HHHHHHhCCCCCCCCChhH-HHHhhhhccccccCCcccccC---CHHHHHHHHHHh
Confidence            986      23456799988543 3334445555653322111 12222221  12333321112   235667778888


Q ss_pred             CCcC
Q psy9184         555 HFDS  558 (562)
Q Consensus       555 ~~~s  558 (562)
                      +.+.
T Consensus       322 ~~~~  325 (437)
T 4aw2_A          322 CSRE  325 (437)
T ss_dssp             SCGG
T ss_pred             cccc
Confidence            7654

>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*

Probab=99.95  E-value=1.9e-28  Score=267.10  Aligned_cols=234  Identities=20%  Similarity=0.258  Sum_probs=167.6

Q ss_pred             CCCceeeeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCccccc
Q psy9184         261 SALKNCKKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTEL  334 (562)
Q Consensus       261 ~~y~~~~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~l  334 (562)
                      ++|+++++||+|+||.||+|      ..||+|++.....      .......+.+|+.+++.++|               
T Consensus        37 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~------~~~~~~~~~~E~~~l~~l~h---------------   95 (494)
T 3lij_A           37 EMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSV------STSSNSKLLEEVAVLKLLDH---------------   95 (494)
T ss_dssp             HHEEEEEEEECC---EEEEEEETTTCCEEEEEEEEC-----------CTTHHHHHHHHHHTTCCC---------------
T ss_pred             cCeEEeeEEecCCCEEEEEEEECCCCcEEEEEEEecccc------CchHHHHHHHHHHHHHhCCC---------------
Confidence            35899999999999999999      7899999986531      11223578899999999998               


Q ss_pred             ccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc---cCCHHHHHHHHHHHHHHHHH
Q psy9184         335 LKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK---YRSPNQTYAMILQVVFSLAV  411 (562)
Q Consensus       335 ~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~---~l~e~~i~~I~~QIl~aL~y  411 (562)
                                 |||++++++|.+             ...+|+|||||.||++++.+.   .+++.+++.++.||+.||.|
T Consensus        96 -----------pniv~~~~~~~~-------------~~~~~lv~e~~~~g~L~~~~~~~~~~~~~~~~~i~~qi~~~l~~  151 (494)
T 3lij_A           96 -----------PNIMKLYDFFED-------------KRNYYLVMECYKGGELFDEIIHRMKFNEVDAAVIIKQVLSGVTY  151 (494)
T ss_dssp             -----------TTBCCEEEEEEC-------------SSEEEEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHH
T ss_pred             -----------CCCCeEEEEEEe-------------CCEEEEEEecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHH
Confidence                       999999999975             558999999999998877664   48999999999999999999


Q ss_pred             HHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecC----CcEEEeecCCCccccCCC
Q psy9184         412 AEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVG----EKICYYDLSQDEELFEGE  487 (562)
Q Consensus       412 LH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~----~g~v~~~l~~~pelF~g~  487 (562)
                      ||+ .||+||||||+|||++..+..                 ..+||+|||+|+....    ...+++..|++||++.+.
T Consensus       152 lH~-~~ivH~Dlkp~Nil~~~~~~~-----------------~~~kl~DfG~a~~~~~~~~~~~~~gt~~y~aPE~l~~~  213 (494)
T 3lij_A          152 LHK-HNIVHRDLKPENLLLESKEKD-----------------ALIKIVDFGLSAVFENQKKMKERLGTAYYIAPEVLRKK  213 (494)
T ss_dssp             HHH-TTEECSCCSGGGEEESCSSTT-----------------CCEEECCCTTCEECBTTBCBCCCCSCTTTCCHHHHTTC
T ss_pred             HHH-CCceeccCChhhEEEeCCCCC-----------------CcEEEEECCCCeECCCCccccccCCCcCeeCHHHHccc
Confidence            999 799999999999999875421                 2699999999987754    234568889999999988


Q ss_pred             CCcHHHHHHHhhcccCCCCCCCCCCChhhhHHHHHHHHhhcccCCCCCCCchhHHHHHHHHHHHhcCCCcCcCC
Q psy9184         488 GDYQFDMYRMMRKQCQNNWQNFTPKNNVFWIHYLVDKATCLKKGYQYLRAPRHQAFELLEELGQNALHFDSCYE  561 (562)
Q Consensus       488 ~~~q~dIy~lm~~~~~~~W~~~~P~tn~~wl~yl~~~Ll~~~~~~~~~~~~~~~~~~~l~~l~~~~l~~~s~~~  561 (562)
                      .+...|||++.-... ..+.+..|+....... +...+......+..+  .....-..+..|.+.||+++...|
T Consensus       214 ~~~~~DiwslG~il~-~ll~g~~pf~~~~~~~-~~~~i~~~~~~~~~~--~~~~~s~~~~~li~~~L~~dp~~R  283 (494)
T 3lij_A          214 YDEKCDVWSIGVILF-ILLAGYPPFGGQTDQE-ILRKVEKGKYTFDSP--EWKNVSEGAKDLIKQMLQFDSQRR  283 (494)
T ss_dssp             BCTHHHHHHHHHHHH-HHHHSSCSSCCSSHHH-HHHHHHHTCCCCCSG--GGTTSCHHHHHHHHHHTCSSTTTS
T ss_pred             CCCchhHHHHHHHHH-HHHhCCCCCCCCCHHH-HHHHHHhCCCCCCch--hcccCCHHHHHHHHHHCCCChhhC
Confidence            888899988643332 3334444543322111 222222212222211  111113456677788887777665

>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*

Probab=99.95  E-value=1.1e-27  Score=245.35  Aligned_cols=173  Identities=19%  Similarity=0.272  Sum_probs=141.4

Q ss_pred             CCCceeeeeeccCceEEEEE-----eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCcccccc
Q psy9184         261 SALKNCKKIGEGVYGEVFKL-----NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTELL  335 (562)
Q Consensus       261 ~~y~~~~~LG~GsfG~Vyka-----~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~l~  335 (562)
                      ++|++.++||+|+||.||+|     +.||+|++....      ........+.+|+.+++.++|                
T Consensus        21 ~~y~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~------~~~~~~~~~~~E~~~l~~l~h----------------   78 (311)
T 3niz_A           21 EKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDA------EDEGIPSTAIREISLLKELHH----------------   78 (311)
T ss_dssp             CEEEEEEEEEECSSCEEEEEEETTSCEEEEEEEC------------CHHHHHHHHHHHHHHCCC----------------
T ss_pred             hhhHhhhhccCCCCeEEEEEEECCCCEEEEEEEeccc------ccchhhHHHHHHHHHHHHcCC----------------
Confidence            67999999999999999999     789999997653      123334678899999999998                


Q ss_pred             cccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc----cCCHHHHHHHHHHHHHHHHH
Q psy9184         336 KCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK----YRSPNQTYAMILQVVFSLAV  411 (562)
Q Consensus       336 ~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~----~l~e~~i~~I~~QIl~aL~y  411 (562)
                                |||+++++++.+             ++.+|+||||+.+ ++.+.+.    .+++.+++.++.||+.||.|
T Consensus        79 ----------p~iv~~~~~~~~-------------~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~  134 (311)
T 3niz_A           79 ----------PNIVSLIDVIHS-------------ERCLTLVFEFMEK-DLKKVLDENKTGLQDSQIKIYLYQLLRGVAH  134 (311)
T ss_dssp             ----------TTBCCEEEEECC-------------SSCEEEEEECCSE-EHHHHHHTCTTCCCHHHHHHHHHHHHHHHHH
T ss_pred             ----------CCEeeeeeEEcc-------------CCEEEEEEcCCCC-CHHHHHHhccCCCCHHHHHHHHHHHHHHHHH
Confidence                      999999999875             5589999999985 4555443    38999999999999999999


Q ss_pred             HHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecC-----CcEEEeecCCCccccCC
Q psy9184         412 AEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVG-----EKICYYDLSQDEELFEG  486 (562)
Q Consensus       412 LH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~-----~g~v~~~l~~~pelF~g  486 (562)
                      ||+ .||+||||||+|||++.++                    .+||+|||+|+....     ....++..|++||++.+
T Consensus       135 LH~-~~ivH~Dikp~NIl~~~~~--------------------~~kl~Dfg~a~~~~~~~~~~~~~~~t~~y~aPE~~~~  193 (311)
T 3niz_A          135 CHQ-HRILHRDLKPQNLLINSDG--------------------ALKLADFGLARAFGIPVRSYTHEVVTLWYRAPDVLMG  193 (311)
T ss_dssp             HHH-TTEECCCCCGGGEEECTTC--------------------CEEECCCTTCEETTSCCC---CCCCCCTTCCHHHHTT
T ss_pred             HHH-CCcccCCCchHhEEECCCC--------------------CEEEccCcCceecCCCcccccCCcccCCcCCHHHhcC
Confidence            999 7999999999999999886                    799999999987643     23345778999999876


Q ss_pred             C--CCcHHHHHHHhhc
Q psy9184         487 E--GDYQFDMYRMMRK  500 (562)
Q Consensus       487 ~--~~~q~dIy~lm~~  500 (562)
                      .  .+...|||++.-.
T Consensus       194 ~~~~~~~~DiwslG~i  209 (311)
T 3niz_A          194 SKKYSTSVDIWSIGCI  209 (311)
T ss_dssp             CCSCCTHHHHHHHHHH
T ss_pred             CCCCCchHHhHHHHHH
Confidence            3  4667999886433

>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}

Probab=99.95  E-value=1.3e-27  Score=243.19  Aligned_cols=224  Identities=20%  Similarity=0.248  Sum_probs=169.2

Q ss_pred             CCCCCceeeeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCccc
Q psy9184         259 PSSALKNCKKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFT  332 (562)
Q Consensus       259 ~~~~y~~~~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv  332 (562)
                      ..++|.+.++||+|+||.||+|      +.||+|++...        .....+.+.+|+.+++.++|             
T Consensus         8 ~~~~~~~~~~lG~G~~g~V~~~~~~~~~~~va~K~~~~~--------~~~~~~~~~~E~~~l~~l~h-------------   66 (310)
T 3s95_A            8 RPSDLIHGEVLGKGCFGQAIKVTHRETGEVMVMKELIRF--------DEETQRTFLKEVKVMRCLEH-------------   66 (310)
T ss_dssp             CGGGEEEEEEEECCSSEEEEEEEETTTCCEEEEEEESCC--------CHHHHHHHHHHHHHHTTCCC-------------
T ss_pred             ChhHeeccceecCCCCEEEEEEEECCCCcEEEEEEeccC--------CHHHHHHHHHHHHHHHhCCC-------------
Confidence            3478999999999999999999      78999998643        24455788999999999998             


Q ss_pred             ccccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc----cCCHHHHHHHHHHHHHH
Q psy9184         333 ELLKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK----YRSPNQTYAMILQVVFS  408 (562)
Q Consensus       333 ~l~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~----~l~e~~i~~I~~QIl~a  408 (562)
                                   |||+++++++.+             ++..|+||||+.||++.+.+.    .+++.++..++.||+.|
T Consensus        67 -------------p~iv~~~~~~~~-------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~a  120 (310)
T 3s95_A           67 -------------PNVLKFIGVLYK-------------DKRLNFITEYIKGGTLRGIIKSMDSQYPWSQRVSFAKDIASG  120 (310)
T ss_dssp             -------------TTBCCEEEEEEE-------------TTEEEEEEECCTTCBHHHHHHHCCTTSCHHHHHHHHHHHHHH
T ss_pred             -------------cCcccEEEEEec-------------CCeeEEEEEecCCCcHHHHHHhccCCCCHHHHHHHHHHHHHH
Confidence                         999999999875             558999999999998876653    38899999999999999


Q ss_pred             HHHHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecCC------------------
Q psy9184         409 LAVAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVGE------------------  470 (562)
Q Consensus       409 L~yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~~------------------  470 (562)
                      |+|||+ .||+||||||+|||++.++                    .+||+|||+++.....                  
T Consensus       121 l~~lH~-~~ivH~dlkp~Nil~~~~~--------------------~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~  179 (310)
T 3s95_A          121 MAYLHS-MNIIHRDLNSHNCLVRENK--------------------NVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKR  179 (310)
T ss_dssp             HHHHHH-TTEECSCCSTTSEEECTTS--------------------CEEECCCTTCEECC--------------------
T ss_pred             HHHHHh-CCccCCCCCcCeEEECCCC--------------------CEEEeecccceecccccccccccccccccccccc
Confidence            999999 7999999999999999886                    7999999999876431                  


Q ss_pred             -cEEEeecCCCccccCCC-CCcHHHHHHHhhccc-----CCCCCCCCCCC------------------hhhhHHHHHHHH
Q psy9184         471 -KICYYDLSQDEELFEGE-GDYQFDMYRMMRKQC-----QNNWQNFTPKN------------------NVFWIHYLVDKA  525 (562)
Q Consensus       471 -g~v~~~l~~~pelF~g~-~~~q~dIy~lm~~~~-----~~~W~~~~P~t------------------n~~wl~yl~~~L  525 (562)
                       ...++..|++||++.+. .+...|||++.-...     ...|....+..                  -...+..++.+|
T Consensus       180 ~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~  259 (310)
T 3s95_A          180 YTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIGRVNADPDYLPRTMDFGLNVRGFLDRYCPPNCPPSFFPITVRC  259 (310)
T ss_dssp             CCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHTCCSSTTTSCBCTTSSBCHHHHHHHTCCTTCCTTHHHHHHHH
T ss_pred             cccCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHhcCCCCCcchhhhHHHHhhhhhccccccCCCCCCHHHHHHHHHH
Confidence             23456779999998874 566799988643332     11122211110                  112355667777


Q ss_pred             hhcccCCCCCCCchhHHHHHHHHHHHhc
Q psy9184         526 TCLKKGYQYLRAPRHQAFELLEELGQNA  553 (562)
Q Consensus       526 l~~~~~~~~~~~~~~~~~~~l~~l~~~~  553 (562)
                      +.   .-+..|+...+.++.|+.+...+
T Consensus       260 l~---~dP~~Rps~~~l~~~L~~l~~~~  284 (310)
T 3s95_A          260 CD---LDPEKRPSFVKLEHWLETLRMHL  284 (310)
T ss_dssp             TC---SSGGGSCCHHHHHHHHHHHHHHH
T ss_pred             cc---CChhhCcCHHHHHHHHHHHHHhc
Confidence            76   33444555555566777666554

>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*

Probab=99.95  E-value=2.7e-28  Score=251.66  Aligned_cols=230  Identities=16%  Similarity=0.177  Sum_probs=161.6

Q ss_pred             CCCCceeeeeeccCceEEEEE---------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCc
Q psy9184         260 SSALKNCKKIGEGVYGEVFKL---------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPC  330 (562)
Q Consensus       260 ~~~y~~~~~LG~GsfG~Vyka---------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~  330 (562)
                      .++|++.+.||+|+||.||+|         +.||+|++.....    .........+.+|+.+++.++|           
T Consensus        16 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~----~~~~~~~~~~~~E~~~l~~l~h-----------   80 (327)
T 3a62_A           16 PECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMI----VRNAKDTAHTKAERNILEEVKH-----------   80 (327)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEECSSTTTTCEEEEEEECCC------------------HHHHHHHCCC-----------
T ss_pred             HHHeEEEEEEEeCCCEEEEEEEEeccCCCCcEEEEEEEEHHHh----hhhhhHHHHHHHHHHHHHhCCC-----------
Confidence            367999999999999999998         5799999986531    1112334567889999999998           


Q ss_pred             ccccccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc---cCCHHHHHHHHHHHHH
Q psy9184         331 FTELLKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK---YRSPNQTYAMILQVVF  407 (562)
Q Consensus       331 fv~l~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~---~l~e~~i~~I~~QIl~  407 (562)
                                     |||++++++|..             ++.+|+||||+.||++.+.+.   .+++..++.++.||+.
T Consensus        81 ---------------p~iv~~~~~~~~-------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~  132 (327)
T 3a62_A           81 ---------------PFIVDLIYAFQT-------------GGKLYLILEYLSGGELFMQLEREGIFMEDTACFYLAEISM  132 (327)
T ss_dssp             ---------------TTBCCEEEEEEC-------------SSCEEEEEECCTTEEHHHHHHHHSSCCHHHHHHHHHHHHH
T ss_pred             ---------------CCccceeEEEEc-------------CCEEEEEEeCCCCCcHHHHHHhCCCCCHHHHHHHHHHHHH
Confidence                           999999999875             558999999999998876664   4899999999999999


Q ss_pred             HHHHHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecCC-----cEEEeecCCCcc
Q psy9184         408 SLAVAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVGE-----KICYYDLSQDEE  482 (562)
Q Consensus       408 aL~yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~~-----g~v~~~l~~~pe  482 (562)
                      ||.|||+ .||+||||||+|||++.++                    .+||+|||+++.....     ...++..|++||
T Consensus       133 al~~lH~-~~ivH~Dlkp~Nill~~~~--------------------~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE  191 (327)
T 3a62_A          133 ALGHLHQ-KGIIYRDLKPENIMLNHQG--------------------HVKLTDFGLCKESIHDGTVTHTFCGTIEYMAPE  191 (327)
T ss_dssp             HHHHHHH-TTCCCCCCCTTTEEECTTS--------------------CEEECCCSCC----------CTTSSCCTTSCHH
T ss_pred             HHHHHHh-CCEEcccCCHHHeEECCCC--------------------cEEEEeCCcccccccCCccccccCCCcCccCHh
Confidence            9999999 7999999999999999886                    7999999999865432     223577899999


Q ss_pred             ccCC-CCCcHHHHHHHhhcccCCCCCCCCCCChhhhHHHHHHHHhhcccCCCCCCCchhHHHHHHHHHHHhcCCCcCcCC
Q psy9184         483 LFEG-EGDYQFDMYRMMRKQCQNNWQNFTPKNNVFWIHYLVDKATCLKKGYQYLRAPRHQAFELLEELGQNALHFDSCYE  561 (562)
Q Consensus       483 lF~g-~~~~q~dIy~lm~~~~~~~W~~~~P~tn~~wl~yl~~~Ll~~~~~~~~~~~~~~~~~~~l~~l~~~~l~~~s~~~  561 (562)
                      ++.+ ..+...|||++.-. ....+.+..|+..... ..+...++.....++..-      -..+.+|...+|..+...|
T Consensus       192 ~~~~~~~~~~~DiwslG~i-l~el~~g~~pf~~~~~-~~~~~~i~~~~~~~p~~~------~~~~~~li~~~L~~dp~~R  263 (327)
T 3a62_A          192 ILMRSGHNRAVDWWSLGAL-MYDMLTGAPPFTGENR-KKTIDKILKCKLNLPPYL------TQEARDLLKKLLKRNAASR  263 (327)
T ss_dssp             HHTTSCCCTHHHHHHHHHH-HHHHHHSSCSCCCSSH-HHHHHHHHHTCCCCCTTS------CHHHHHHHHHHSCSCGGGS
T ss_pred             hCcCCCCCCcccchhHHHH-HHHHHHCCCCCCCCCH-HHHHHHHHhCCCCCCCCC------CHHHHHHHHHHHhcCHhhc
Confidence            8876 45667999886433 3334445555543221 122233333122232211      2466777888888776655

>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*

Probab=99.95  E-value=1.2e-28  Score=267.88  Aligned_cols=234  Identities=20%  Similarity=0.273  Sum_probs=172.8

Q ss_pred             CCCceeeeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCccccc
Q psy9184         261 SALKNCKKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTEL  334 (562)
Q Consensus       261 ~~y~~~~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~l  334 (562)
                      ++|++.++||+|+||.||+|      +.||||++....      ........+.+|+.+++.++|               
T Consensus        22 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~------~~~~~~~~~~~E~~~l~~l~h---------------   80 (486)
T 3mwu_A           22 ERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKAS------AKNKDTSTILREVELLKKLDH---------------   80 (486)
T ss_dssp             HHEEEEEEEECCSSSEEEEEEETTTCCEEEEEEEEHHH------HBCSCHHHHHHHHHHHHHCCC---------------
T ss_pred             cceEEeEEEeecCCEEEEEEEECCCCCEEEEEEEeccc------ccchHHHHHHHHHHHHHhCCC---------------
Confidence            56899999999999999999      789999997532      112234678899999999998               


Q ss_pred             ccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc---cCCHHHHHHHHHHHHHHHHH
Q psy9184         335 LKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK---YRSPNQTYAMILQVVFSLAV  411 (562)
Q Consensus       335 ~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~---~l~e~~i~~I~~QIl~aL~y  411 (562)
                                 |||+++++++.+             ...+|+|||||.||++.+.+.   .+++.+++.++.||+.||.|
T Consensus        81 -----------pniv~~~~~~~~-------------~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~i~~qi~~al~~  136 (486)
T 3mwu_A           81 -----------PNIMKLFEILED-------------SSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITY  136 (486)
T ss_dssp             -----------TTBCCEEEEEEC-------------SSEEEEEECCCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHH
T ss_pred             -----------CCcCeEEEEEEc-------------CCEEEEEEEcCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHH
Confidence                       999999999875             558999999999998877664   48999999999999999999


Q ss_pred             HHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecCC----cEEEeecCCCccccCCC
Q psy9184         412 AEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVGE----KICYYDLSQDEELFEGE  487 (562)
Q Consensus       412 LH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~~----g~v~~~l~~~pelF~g~  487 (562)
                      ||+ .||+||||||+|||++..+..                 ..+||+|||+|+.....    ..+++..|++||++.+.
T Consensus       137 lH~-~~ivH~Dlkp~Nil~~~~~~~-----------------~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~  198 (486)
T 3mwu_A          137 MHK-HNIVHRDLKPENILLESKEKD-----------------CDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAPEVLRGT  198 (486)
T ss_dssp             HHH-TTCCCSCCSGGGEEESSSSTT-----------------CCEEECSCSCTTTBCCC----CCTTGGGGCCGGGGGSC
T ss_pred             HHH-CCeEeccCchHHEEEecCCCC-----------------CCEEEEECCcCeECCCCCccCCCcCCCCCCCHHHhCCC
Confidence            999 799999999999999765321                 26999999999866542    23457889999999998


Q ss_pred             CCcHHHHHHHhhcccCCCCCCCCCCChhhhHHHHHHHHhhcccCCCCCCCchhHHHHHHHHHHHhcCCCcCcCC
Q psy9184         488 GDYQFDMYRMMRKQCQNNWQNFTPKNNVFWIHYLVDKATCLKKGYQYLRAPRHQAFELLEELGQNALHFDSCYE  561 (562)
Q Consensus       488 ~~~q~dIy~lm~~~~~~~W~~~~P~tn~~wl~yl~~~Ll~~~~~~~~~~~~~~~~~~~l~~l~~~~l~~~s~~~  561 (562)
                      .+...|||++.-... ..+.+..|+........ ...+..  ..+..........-..+..|...+|+++...|
T Consensus       199 ~~~~~DiwslG~il~-~ll~g~~pf~~~~~~~~-~~~i~~--~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R  268 (486)
T 3mwu_A          199 YDEKCDVWSAGVILY-ILLSGTPPFYGKNEYDI-LKRVET--GKYAFDLPQWRTISDDAKDLIRKMLTFHPSLR  268 (486)
T ss_dssp             CCHHHHHHHHHHHHH-HHHHSSCSSCCSSHHHH-HHHHHH--TCCCSCSGGGGGSCHHHHHHHHHHTCSSTTTS
T ss_pred             CCchhhHHHHHHHHH-HHHhCCCCCCCCCHHHH-HHHHHh--CCCCCCCcccCCCCHHHHHHHHHHcCCChhhC
Confidence            888899998643332 33344455533221222 222222  11221111111223467778888888877665

>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A

Probab=99.95  E-value=1.1e-27  Score=241.72  Aligned_cols=174  Identities=20%  Similarity=0.308  Sum_probs=144.7

Q ss_pred             CCCceeeeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCccccc
Q psy9184         261 SALKNCKKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTEL  334 (562)
Q Consensus       261 ~~y~~~~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~l  334 (562)
                      ++|++.++||+|+||.||+|      +.||+|++.....      .......+.+|+.+++.++|               
T Consensus         2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~------~~~~~~~~~~E~~~l~~l~h---------------   60 (292)
T 3o0g_A            2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDD------DEGVPSSALREICLLKELKH---------------   60 (292)
T ss_dssp             CSEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCS------STTHHHHHHHHHHHHTTCCC---------------
T ss_pred             CCceeeeEecCCCCeEEEEEEECCCCceEEEEeeeccCC------cCCcchHHHHHHHHHhcCCC---------------
Confidence            57999999999999999999      7899999987541      23334677899999999998               


Q ss_pred             ccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc----cCCHHHHHHHHHHHHHHHH
Q psy9184         335 LKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK----YRSPNQTYAMILQVVFSLA  410 (562)
Q Consensus       335 ~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~----~l~e~~i~~I~~QIl~aL~  410 (562)
                                 |||+++++++.+             ++.+|+||||+.+ +++..+.    .+++.+++.++.||+.||.
T Consensus        61 -----------~~iv~~~~~~~~-------------~~~~~lv~e~~~~-~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~  115 (292)
T 3o0g_A           61 -----------KNIVRLHDVLHS-------------DKKLTLVFEFCDQ-DLKKYFDSCNGDLDPEIVKSFLFQLLKGLG  115 (292)
T ss_dssp             -----------TTBCCEEEEEEE-------------TTEEEEEEECCSE-EHHHHHHHTTTCCCHHHHHHHHHHHHHHHH
T ss_pred             -----------CCEeeEEeEEEe-------------CCEEEEEEecCCC-CHHHHHHhCCCCCCHHHHHHHHHHHHHHHH
Confidence                       999999999876             5589999999985 4555442    4899999999999999999


Q ss_pred             HHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecC-----CcEEEeecCCCccccC
Q psy9184         411 VAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVG-----EKICYYDLSQDEELFE  485 (562)
Q Consensus       411 yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~-----~g~v~~~l~~~pelF~  485 (562)
                      |||+ .||+||||||+|||++.++                    .+||+|||+|+....     ....++..|++||++.
T Consensus       116 ~lH~-~~ivH~dikp~Nil~~~~~--------------------~~kl~Dfg~~~~~~~~~~~~~~~~~t~~y~aPE~~~  174 (292)
T 3o0g_A          116 FCHS-RNVLHRDLKPQNLLINRNG--------------------ELKLANFGLARAFGIPVRCYSAEVVTLWYRPPDVLF  174 (292)
T ss_dssp             HHHH-TTEECCCCSGGGEEECTTS--------------------CEEECCCTTCEECCSCCSCCCSCCSCGGGCCHHHHT
T ss_pred             HHHh-CCeecCCCCHHHEEEcCCC--------------------CEEEeecccceecCCccccccCCccccCCcChHHHc
Confidence            9999 7999999999999999886                    799999999987653     2334577899999887


Q ss_pred             CC--CCcHHHHHHHhhcc
Q psy9184         486 GE--GDYQFDMYRMMRKQ  501 (562)
Q Consensus       486 g~--~~~q~dIy~lm~~~  501 (562)
                      +.  .....|||++.-..
T Consensus       175 ~~~~~~~~~DiwslG~il  192 (292)
T 3o0g_A          175 GAKLYSTSIDMWSAGCIF  192 (292)
T ss_dssp             TCSCCCTHHHHHHHHHHH
T ss_pred             CCCCcCchHHHHHHHHHH
Confidence            64  46679998865443

>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A

Probab=99.95  E-value=2e-28  Score=255.30  Aligned_cols=237  Identities=14%  Similarity=0.146  Sum_probs=170.5

Q ss_pred             CCCceeeeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCccccc
Q psy9184         261 SALKNCKKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTEL  334 (562)
Q Consensus       261 ~~y~~~~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~l  334 (562)
                      ++|++.+.||+|+||.||+|      +.||||++......   .......+.+.+|+.+++.++|               
T Consensus        24 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~---~~~~~~~~~~~~E~~~l~~l~h---------------   85 (351)
T 3c0i_A           24 DVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFT---SSPGLSTEDLKREASICHMLKH---------------   85 (351)
T ss_dssp             HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHH---TSSSCCHHHHHHHHHHHHHCCC---------------
T ss_pred             cceEEeeEEeeCCCEEEEEEEECCCCCEEEEEEEEhhhcc---ccccchHHHHHHHHHHHHhCCC---------------
Confidence            46899999999999999999      78999999753200   0001124678899999999998               


Q ss_pred             ccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc-------cCCHHHHHHHHHHHHH
Q psy9184         335 LKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK-------YRSPNQTYAMILQVVF  407 (562)
Q Consensus       335 ~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~-------~l~e~~i~~I~~QIl~  407 (562)
                                 |||++++++|.+             ++.+|+|||||+||++.+.+.       .+++..++.++.||+.
T Consensus        86 -----------pnIv~~~~~~~~-------------~~~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~  141 (351)
T 3c0i_A           86 -----------PHIVELLETYSS-------------DGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILE  141 (351)
T ss_dssp             -----------TTBCCEEEEEEE-------------TTEEEEEEECCSSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHH
T ss_pred             -----------CCCCcEEEEEEe-------------CCEEEEEEeCCCCCCHHHHHHHhcccCCCCCHHHHHHHHHHHHH
Confidence                       999999999876             558999999999998866553       2899999999999999


Q ss_pred             HHHHHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecCC-----cEEEeecCCCcc
Q psy9184         408 SLAVAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVGE-----KICYYDLSQDEE  482 (562)
Q Consensus       408 aL~yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~~-----g~v~~~l~~~pe  482 (562)
                      ||.|||+ .||+||||||+|||++.++..                 ..+||+|||+++.....     ..+++..|++||
T Consensus       142 al~~lH~-~~ivHrDlkp~NIl~~~~~~~-----------------~~vkl~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE  203 (351)
T 3c0i_A          142 ALRYCHD-NNIIHRDVKPHCVLLASKENS-----------------APVKLGGFGVAIQLGESGLVAGGRVGTPHFMAPE  203 (351)
T ss_dssp             HHHHHHH-TTEECSCCSGGGEEECSSSTT-----------------CCEEECCCTTCEECCTTSCBCCCCCSCGGGCCHH
T ss_pred             HHHHHHH-CCceeccCChHHeEEecCCCC-----------------CcEEEecCcceeEecCCCeeecCCcCCcCccCHH
Confidence            9999999 799999999999999876521                 15999999999887642     345688899999


Q ss_pred             ccCCC-CCcHHHHHHHhhcccCCCCCCCCCCChhhhHHHHHHHHhhcccCCCCCCCchhHHHHHHHHHHHhcCCCcCcCC
Q psy9184         483 LFEGE-GDYQFDMYRMMRKQCQNNWQNFTPKNNVFWIHYLVDKATCLKKGYQYLRAPRHQAFELLEELGQNALHFDSCYE  561 (562)
Q Consensus       483 lF~g~-~~~q~dIy~lm~~~~~~~W~~~~P~tn~~wl~yl~~~Ll~~~~~~~~~~~~~~~~~~~l~~l~~~~l~~~s~~~  561 (562)
                      ++.+. .+...|||++.-.. ...+.+..|+....  ..+...... + .+..........-..+.+|...+|.++...|
T Consensus       204 ~~~~~~~~~~~DiwslG~il-~~ll~g~~pf~~~~--~~~~~~i~~-~-~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R  278 (351)
T 3c0i_A          204 VVKREPYGKPVDVWGCGVIL-FILLSGCLPFYGTK--ERLFEGIIK-G-KYKMNPRQWSHISESAKDLVRRMLMLDPAER  278 (351)
T ss_dssp             HHTTCCBCTHHHHHHHHHHH-HHHHHSSCSSCSSH--HHHHHHHHH-T-CCCCCHHHHTTSCHHHHHHHHHHTCSSTTTS
T ss_pred             HHcCCCCCchHhhHHHHHHH-HHHHHCCCCCCCcH--HHHHHHHHc-C-CCCCCccccccCCHHHHHHHHHHCCCChhHC
Confidence            98874 56679998864333 23344455553321  112222232 1 1111100000113467778888888887765


Q ss_pred             C
Q psy9184         562 M  562 (562)
Q Consensus       562 ~  562 (562)
                      +
T Consensus       279 ~  279 (351)
T 3c0i_A          279 I  279 (351)
T ss_dssp             C
T ss_pred             c
Confidence            3

>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*

Probab=99.95  E-value=6.6e-28  Score=241.44  Aligned_cols=234  Identities=15%  Similarity=0.156  Sum_probs=173.5

Q ss_pred             CCCceeeeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCccccc
Q psy9184         261 SALKNCKKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTEL  334 (562)
Q Consensus       261 ~~y~~~~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~l  334 (562)
                      ++|++.+.||+|+||.||+|      +.||+|++....      ......+.+.+|+.+++.++|               
T Consensus         6 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~------~~~~~~~~~~~e~~~l~~l~h---------------   64 (284)
T 3kk8_A            6 DNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKK------LSARDFQKLEREARICRKLQH---------------   64 (284)
T ss_dssp             TTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGG------CCHHHHHHHHHHHHHHHHCCC---------------
T ss_pred             hhhhhhhhhcCcCCeEEEEEEEcCCCceEEEEEeeccc------CCHHHHHHHHHHHHHHHHcCC---------------
Confidence            67999999999999999999      789999998653      234455778899999999998               


Q ss_pred             ccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc---cCCHHHHHHHHHHHHHHHHH
Q psy9184         335 LKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK---YRSPNQTYAMILQVVFSLAV  411 (562)
Q Consensus       335 ~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~---~l~e~~i~~I~~QIl~aL~y  411 (562)
                                 |||+++++++..             ++..|+||||+.||++.+.+.   .+++.++..++.||+.||.|
T Consensus        65 -----------~~i~~~~~~~~~-------------~~~~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~  120 (284)
T 3kk8_A           65 -----------PNIVRLHDSIQE-------------ESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAY  120 (284)
T ss_dssp             -----------TTBCCEEEEEEC-------------SSEEEEEECCCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHH
T ss_pred             -----------CCcCeEEEEEEc-------------CCEEEEEEecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHH
Confidence                       999999998875             558899999999998766664   48999999999999999999


Q ss_pred             HHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecCC----cEEEeecCCCccccCCC
Q psy9184         412 AEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVGE----KICYYDLSQDEELFEGE  487 (562)
Q Consensus       412 LH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~~----g~v~~~l~~~pelF~g~  487 (562)
                      ||+ .||+||||||+|||++.++..                 ..+||+|||++......    +..++..|++||++.+.
T Consensus       121 lH~-~~i~H~dikp~Nil~~~~~~~-----------------~~~kl~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~  182 (284)
T 3kk8_A          121 CHS-NGIVHRNLKPENLLLASKAKG-----------------AAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKKD  182 (284)
T ss_dssp             HHH-TTEECSCCCGGGEEESSSSTT-----------------CCEEECCCTTCEECCSSCBCCCSCSCGGGCCHHHHTTC
T ss_pred             HHH-CCcCcCCCCHHHEEEecCCCC-----------------CcEEEeeceeeEEcccCccccCCCCCcCCcCchhhcCC
Confidence            999 799999999999999876521                 25999999999876642    23567789999998874


Q ss_pred             -CCcHHHHHHHhhcccCCCCCCCCCCChhhhHHHHHHHHhhcccCCCCCCCchhHHHHHHHHHHHhcCCCcCcCC
Q psy9184         488 -GDYQFDMYRMMRKQCQNNWQNFTPKNNVFWIHYLVDKATCLKKGYQYLRAPRHQAFELLEELGQNALHFDSCYE  561 (562)
Q Consensus       488 -~~~q~dIy~lm~~~~~~~W~~~~P~tn~~wl~yl~~~Ll~~~~~~~~~~~~~~~~~~~l~~l~~~~l~~~s~~~  561 (562)
                       .....|||++.-.. ...+.+..|+......... ..+......++.+.  ....-..+.+|...+|.++...|
T Consensus       183 ~~~~~~Di~slG~~l-~~l~~g~~pf~~~~~~~~~-~~~~~~~~~~~~~~--~~~~~~~~~~li~~~l~~dp~~R  253 (284)
T 3kk8_A          183 PYSKPVDIWACGVIL-YILLVGYPPFWDEDQHRLY-AQIKAGAYDYPSPE--WDTVTPEAKSLIDSMLTVNPKKR  253 (284)
T ss_dssp             CBCTHHHHHHHHHHH-HHHHHSSCSSCCSSHHHHH-HHHHHTCCCCCTTT--TTTSCHHHHHHHHHHSCSSTTTS
T ss_pred             CCCcccchHHHHHHH-HHHHHCCCCCCCCchhHHH-HHHHhccccCCchh--hcccCHHHHHHHHHHcccChhhC
Confidence             46679998864333 2344455555333222222 22222122222211  11123467778888998887665

>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*

Probab=99.95  E-value=7.9e-29  Score=265.23  Aligned_cols=229  Identities=15%  Similarity=0.128  Sum_probs=168.5

Q ss_pred             CCCCCceeeeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCccc
Q psy9184         259 PSSALKNCKKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFT  332 (562)
Q Consensus       259 ~~~~y~~~~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv  332 (562)
                      ..++|++.++||+|+||.||+|      +.||+|++....     .........+.+|+.+++.++|             
T Consensus        67 ~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~k~~-----~~~~~~~~~~~~E~~il~~l~h-------------  128 (410)
T 3v8s_A           67 KAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFE-----MIKRSDSAFFWEERDIMAFANS-------------  128 (410)
T ss_dssp             CGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHH-----HHHTCCCSTHHHHHHHHHHCCC-------------
T ss_pred             CccccEEEEEEEcCCCEEEEEEEECCCCcEEEEEEEehhh-----hhhhHHHHHHHHHHHHHHhCCC-------------
Confidence            4478999999999999999999      789999997531     1111122357789999999998             


Q ss_pred             ccccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc--cCCHHHHHHHHHHHHHHHH
Q psy9184         333 ELLKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK--YRSPNQTYAMILQVVFSLA  410 (562)
Q Consensus       333 ~l~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~--~l~e~~i~~I~~QIl~aL~  410 (562)
                                   |||++++++|.+             ++.+|+|||||+||++.+.+.  .+++..++.++.||+.||.
T Consensus       129 -------------p~Iv~l~~~~~~-------------~~~~~lV~E~~~gg~L~~~l~~~~~~e~~~~~~~~qi~~aL~  182 (410)
T 3v8s_A          129 -------------PWVVQLFYAFQD-------------DRYLYMVMEYMPGGDLVNLMSNYDVPEKWARFYTAEVVLALD  182 (410)
T ss_dssp             -------------TTBCCEEEEEEC-------------SSEEEEEECCCTTEEHHHHHHHCCCCHHHHHHHHHHHHHHHH
T ss_pred             -------------CCCCeEEEEEEE-------------CCEEEEEEeCCCCCcHHHHHHcCCCCHHHHHHHHHHHHHHHH
Confidence                         999999999986             568999999999998877664  4899999999999999999


Q ss_pred             HHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecCC------cEEEeecCCCcccc
Q psy9184         411 VAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVGE------KICYYDLSQDEELF  484 (562)
Q Consensus       411 yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~~------g~v~~~l~~~pelF  484 (562)
                      |||+ .||+||||||+|||++.++                    .+||+|||+|+.....      ..+++..|++||++
T Consensus       183 ~LH~-~givHrDLKp~NILl~~~g--------------------~ikL~DFG~a~~~~~~~~~~~~~~~gt~~Y~APE~l  241 (410)
T 3v8s_A          183 AIHS-MGFIHRDVKPDNMLLDKSG--------------------HLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVL  241 (410)
T ss_dssp             HHHH-TTEECCCCSGGGEEECTTS--------------------CEEECCCTTCEECCTTSEEECCSCCSCGGGCCHHHH
T ss_pred             HHHH-CCeEeccCCHHHeeECCCC--------------------CEEEeccceeEeeccCCcccccCCcCCccccCHHHh
Confidence            9999 7999999999999999887                    7999999999876543      34568889999998


Q ss_pred             CCCC-----CcHHHHHHHhhcccCCCCCCCCCCChhhhHHHHHHHHhhc--ccCCCCCCCchhHHHHHHHHHHHhcCCCc
Q psy9184         485 EGEG-----DYQFDMYRMMRKQCQNNWQNFTPKNNVFWIHYLVDKATCL--KKGYQYLRAPRHQAFELLEELGQNALHFD  557 (562)
Q Consensus       485 ~g~~-----~~q~dIy~lm~~~~~~~W~~~~P~tn~~wl~yl~~~Ll~~--~~~~~~~~~~~~~~~~~l~~l~~~~l~~~  557 (562)
                      .+..     ....|||++. ..+...+.+..|+...- ...+..+++..  ...|+....-    -..+..|+..+|+.+
T Consensus       242 ~~~~~~~~~~~~~DiwSlG-vilyell~G~~Pf~~~~-~~~~~~~i~~~~~~~~~p~~~~~----s~~~~~li~~lL~~~  315 (410)
T 3v8s_A          242 KSQGGDGYYGRECDWWSVG-VFLYEMLVGDTPFYADS-LVGTYSKIMNHKNSLTFPDDNDI----SKEAKNLICAFLTDR  315 (410)
T ss_dssp             HTTTTTCEEETHHHHHHHH-HHHHHHHHSSCTTCCSS-HHHHHHHHHTHHHHCCCCTTCCC----CHHHHHHHHHHSSCG
T ss_pred             hccCCCcCCCCcceEecch-HHHHHHHhCCCCCCCCC-hhhHHHHHHhccccccCCCcccc----cHHHHHHHHHHccCh
Confidence            7643     3568998754 33434555666663322 11222233321  1233332111    235666677777754


Q ss_pred             C
Q psy9184         558 S  558 (562)
Q Consensus       558 s  558 (562)
                      .
T Consensus       316 ~  316 (410)
T 3v8s_A          316 E  316 (410)
T ss_dssp             G
T ss_pred             h
Confidence            4

>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7

Probab=99.95  E-value=5.4e-28  Score=256.58  Aligned_cols=231  Identities=16%  Similarity=0.150  Sum_probs=172.8

Q ss_pred             CCCceeeeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCccccc
Q psy9184         261 SALKNCKKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTEL  334 (562)
Q Consensus       261 ~~y~~~~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~l  334 (562)
                      ++|++.+.||+|+||.||+|      +.||+|++....        ......+.+|+.+++.++|               
T Consensus        51 ~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~--------~~~~~~~~~E~~il~~l~h---------------  107 (387)
T 1kob_A           51 DYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPY--------PLDKYTVKNEISIMNQLHH---------------  107 (387)
T ss_dssp             GTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCS--------HHHHHHHHHHHHHHTTCCS---------------
T ss_pred             cceEEEEEEecCCCEEEEEEEECCCCCEEEEEEecccc--------hhhHHHHHHHHHHHHhCCC---------------
Confidence            67999999999999999999      789999998653        2233578899999999988               


Q ss_pred             ccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc----cCCHHHHHHHHHHHHHHHH
Q psy9184         335 LKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK----YRSPNQTYAMILQVVFSLA  410 (562)
Q Consensus       335 ~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~----~l~e~~i~~I~~QIl~aL~  410 (562)
                                 |||++++++|.+             ...+|+||||+.||++.+.+.    .+++.+++.++.||+.||.
T Consensus       108 -----------pnIv~~~~~~~~-------------~~~~~lv~E~~~gg~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~  163 (387)
T 1kob_A          108 -----------PKLINLHDAFED-------------KYEMVLILEFLSGGELFDRIAAEDYKMSEAEVINYMRQACEGLK  163 (387)
T ss_dssp             -----------TTBCCEEEEEEC-------------SSEEEEEEECCCCCBHHHHTTCTTCCBCHHHHHHHHHHHHHHHH
T ss_pred             -----------cCCCeEEEEEEe-------------CCEEEEEEEcCCCCcHHHHHHhhcCCCCHHHHHHHHHHHHHHHH
Confidence                       999999999875             558999999999998877664    3899999999999999999


Q ss_pred             HHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecCC----cEEEeecCCCccccCC
Q psy9184         411 VAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVGE----KICYYDLSQDEELFEG  486 (562)
Q Consensus       411 yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~~----g~v~~~l~~~pelF~g  486 (562)
                      |||+ .||+||||||+|||++.++.                  ..+||+|||+|+.....    ...++..|++||++.+
T Consensus       164 ~LH~-~givHrDlkp~NIll~~~~~------------------~~vkL~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~  224 (387)
T 1kob_A          164 HMHE-HSIVHLDIKPENIMCETKKA------------------SSVKIIDFGLATKLNPDEIVKVTTATAEFAAPEIVDR  224 (387)
T ss_dssp             HHHH-TTEECCCCCGGGEEESSTTC------------------CCEEECCCTTCEECCTTSCEEEECSSGGGCCHHHHTT
T ss_pred             HHHh-CCeeecccchHHeEEecCCC------------------CceEEEecccceecCCCcceeeeccCCCccCchhccC
Confidence            9999 79999999999999986431                  16999999999987643    2345778999999887


Q ss_pred             C-CCcHHHHHHHhhcccCCCCCCCCCCChhhhHHHHHHHHhhcccCCCCCCCchhHHHHHHHHHHHhcCCCcCcCC
Q psy9184         487 E-GDYQFDMYRMMRKQCQNNWQNFTPKNNVFWIHYLVDKATCLKKGYQYLRAPRHQAFELLEELGQNALHFDSCYE  561 (562)
Q Consensus       487 ~-~~~q~dIy~lm~~~~~~~W~~~~P~tn~~wl~yl~~~Ll~~~~~~~~~~~~~~~~~~~l~~l~~~~l~~~s~~~  561 (562)
                      . .+...|||++.-. ....+.+..|+........+ ..+......+....  ....-..+.+|...+|+.+...|
T Consensus       225 ~~~~~~~DiwSlG~i-l~elltg~~Pf~~~~~~~~~-~~i~~~~~~~~~~~--~~~~s~~~~~li~~~L~~dP~~R  296 (387)
T 1kob_A          225 EPVGFYTDMWAIGVL-GYVLLSGLSPFAGEDDLETL-QNVKRCDWEFDEDA--FSSVSPEAKDFIKNLLQKEPRKR  296 (387)
T ss_dssp             CCBCHHHHHHHHHHH-HHHHHHSCCSSCCSSHHHHH-HHHHHCCCCCCSST--TTTSCHHHHHHHHTTSCSSGGGS
T ss_pred             CCCCCcccEeeHhHH-HHHHHhCCCCCCCCCHHHHH-HHHHhCCCCCCccc--cccCCHHHHHHHHHHcCCChhHC
Confidence            4 5566999886433 33444555565433222222 22222122222211  11123467888999999887665

>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*

Probab=99.95  E-value=6.9e-29  Score=253.34  Aligned_cols=179  Identities=16%  Similarity=0.224  Sum_probs=142.4

Q ss_pred             CCCceeeeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCccccc
Q psy9184         261 SALKNCKKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTEL  334 (562)
Q Consensus       261 ~~y~~~~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~l  334 (562)
                      ++|++.+.||+|+||.||+|      +.||||++....     .........+.+|+.+++.++|               
T Consensus        12 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-----~~~~~~~~~~~~E~~~l~~l~h---------------   71 (311)
T 3ork_A           12 DRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADL-----ARDPSFYLRFRREAQNAAALNH---------------   71 (311)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECTTT-----TTSHHHHHHHHHHHTTCCCCCC---------------
T ss_pred             CcEEEEEEEccCCCEEEEEEEECCCCceEEEEEeCccc-----cCCHHHHHHHHHHHHHHHcCCC---------------
Confidence            67999999999999999999      799999998753     2234555678899999999988               


Q ss_pred             ccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc---cCCHHHHHHHHHHHHHHHHH
Q psy9184         335 LKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK---YRSPNQTYAMILQVVFSLAV  411 (562)
Q Consensus       335 ~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~---~l~e~~i~~I~~QIl~aL~y  411 (562)
                                 |||+++++++.....         .....|+||||++||++.+.+.   .+++.+++.++.||+.||.|
T Consensus        72 -----------p~iv~~~~~~~~~~~---------~~~~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~  131 (311)
T 3ork_A           72 -----------PAIVAVYDTGEAETP---------AGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNF  131 (311)
T ss_dssp             -----------TTBCCEEEEEEEEET---------TEEEEEEEEECCCEEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHH
T ss_pred             -----------CCcceEEEeeeccCC---------CCcccEEEEecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHH
Confidence                       999999998875320         1235699999999987766653   48999999999999999999


Q ss_pred             HHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecC--------CcEEEeecCCCccc
Q psy9184         412 AEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVG--------EKICYYDLSQDEEL  483 (562)
Q Consensus       412 LH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~--------~g~v~~~l~~~pel  483 (562)
                      ||+ .||+||||||+|||++.++                    .+||+|||+++....        ...+++..|++||+
T Consensus       132 lH~-~~ivH~dlkp~Nil~~~~~--------------------~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~  190 (311)
T 3ork_A          132 SHQ-NGIIHRDVKPANIMISATN--------------------AVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQ  190 (311)
T ss_dssp             HHH-TTCCCCCCCGGGEEEETTS--------------------CEEECCCSCC------------------CCTTCCHHH
T ss_pred             HHH-CCCCcCCCCHHHEEEcCCC--------------------CEEEeeccCcccccccccccccccccCcCcccCCHHH
Confidence            999 7999999999999999886                    799999999987543        23446888999999


Q ss_pred             cCCC-CCcHHHHHHHhhc
Q psy9184         484 FEGE-GDYQFDMYRMMRK  500 (562)
Q Consensus       484 F~g~-~~~q~dIy~lm~~  500 (562)
                      +.+. .+...|||++.-.
T Consensus       191 ~~~~~~~~~~Di~slG~~  208 (311)
T 3ork_A          191 ARGDSVDARSDVYSLGCV  208 (311)
T ss_dssp             HHTCCCCHHHHHHHHHHH
T ss_pred             hcCCCCCchHhHHHHHHH
Confidence            8774 5666999885433

>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}

Probab=99.95  E-value=2.8e-28  Score=245.77  Aligned_cols=232  Identities=22%  Similarity=0.269  Sum_probs=169.4

Q ss_pred             CCCceeeeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCccccc
Q psy9184         261 SALKNCKKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTEL  334 (562)
Q Consensus       261 ~~y~~~~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~l  334 (562)
                      ++|.+.++||+|+||.||+|      ..+|+|++.....       ....+.+.+|+.+++.++|               
T Consensus        22 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~-------~~~~~~~~~E~~~l~~l~h---------------   79 (285)
T 3is5_A           22 DLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRS-------QVPMEQIEAEIEVLKSLDH---------------   79 (285)
T ss_dssp             HHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGC-------CSCHHHHHHHHHHHHTCCC---------------
T ss_pred             hheeecceeccCCCeEEEEEEEccCCceEEEEEeecccc-------chhHHHHHHHHHHHHhCCC---------------
Confidence            56899999999999999999      7899999986531       2234678899999999998               


Q ss_pred             ccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCcccc-------ccCCHHHHHHHHHHHHH
Q psy9184         335 LKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDI-------KYRSPNQTYAMILQVVF  407 (562)
Q Consensus       335 ~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l-------~~l~e~~i~~I~~QIl~  407 (562)
                                 |||+++++++.+             ....|+||||+.||++.+.+       ..+++..++.++.||+.
T Consensus        80 -----------p~iv~~~~~~~~-------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~  135 (285)
T 3is5_A           80 -----------PNIIKIFEVFED-------------YHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMN  135 (285)
T ss_dssp             -----------TTBCCEEEEEEC-------------SSEEEEEECCCSCCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHH
T ss_pred             -----------chHHhHHHheec-------------CCeEEEEEEeCCCCcHHHHHHhhhhcccCCCHHHHHHHHHHHHH
Confidence                       999999999875             55899999999999887766       34899999999999999


Q ss_pred             HHHHHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecC----CcEEEeecCCCccc
Q psy9184         408 SLAVAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVG----EKICYYDLSQDEEL  483 (562)
Q Consensus       408 aL~yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~----~g~v~~~l~~~pel  483 (562)
                      ||.|||+ .||+||||||+|||++..+..                 ..+||+|||+|+....    ....++..|++||+
T Consensus       136 ~L~~LH~-~~ivH~dikp~NIl~~~~~~~-----------------~~~kl~Dfg~a~~~~~~~~~~~~~~t~~y~aPE~  197 (285)
T 3is5_A          136 ALAYFHS-QHVVHKDLKPENILFQDTSPH-----------------SPIKIIDFGLAELFKSDEHSTNAAGTALYMAPEV  197 (285)
T ss_dssp             HHHHHHH-TTCCCCCCSGGGEEESSSSTT-----------------CCEEECCCCCCCC----------CTTGGGCCHHH
T ss_pred             HHHHHHh-CCEEECCCCHHHEEEecCCCC-----------------CCEEEEeeecceecCCcccCcCcccccCcCChHH
Confidence            9999999 799999999999999654311                 1699999999986543    22344677999999


Q ss_pred             cCCCCCcHHHHHHHhhcccCCCCCCCCCCChhhhHHHHHHHHhhcccCCCCCCCchhHHHHHHHHHHHhcCCCcCcCC
Q psy9184         484 FEGEGDYQFDMYRMMRKQCQNNWQNFTPKNNVFWIHYLVDKATCLKKGYQYLRAPRHQAFELLEELGQNALHFDSCYE  561 (562)
Q Consensus       484 F~g~~~~q~dIy~lm~~~~~~~W~~~~P~tn~~wl~yl~~~Ll~~~~~~~~~~~~~~~~~~~l~~l~~~~l~~~s~~~  561 (562)
                      +.+......|||++.-... ..+.+..|+.....-. +..........+.......   -..+.+|.+.+|.++...|
T Consensus       198 ~~~~~~~~~Di~slG~il~-~ll~g~~pf~~~~~~~-~~~~~~~~~~~~~~~~~~~---~~~~~~li~~~L~~dP~~R  270 (285)
T 3is5_A          198 FKRDVTFKCDIWSAGVVMY-FLLTGCLPFTGTSLEE-VQQKATYKEPNYAVECRPL---TPQAVDLLKQMLTKDPERR  270 (285)
T ss_dssp             HTTCCCHHHHHHHHHHHHH-HHHHSSCSSCCSSHHH-HHHHHHHCCCCCCC--CCC---CHHHHHHHHHHTCSCTTTS
T ss_pred             hccCCCcccCeehHHHHHH-HHHhCCCCCCCCCHHH-HHhhhccCCcccccccCcC---CHHHHHHHHHHccCChhhC
Confidence            9888888899988544332 3334455554333222 2222222122222221111   2356678889999887765

>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*

Probab=99.95  E-value=1.3e-28  Score=260.07  Aligned_cols=228  Identities=18%  Similarity=0.178  Sum_probs=160.4

Q ss_pred             CCCceeeeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHH-HHhcCCccccCCCCCCcccc
Q psy9184         261 SALKNCKKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMV-TKETSDLQYRTENSTPCFTE  333 (562)
Q Consensus       261 ~~y~~~~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~i-lk~L~h~~~~~~n~~p~fv~  333 (562)
                      ++|++++.||+|+||.||+|      +.||||++....     .........+.+|..+ ++.++|              
T Consensus        38 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~-----~~~~~~~~~~~~e~~~ll~~~~h--------------   98 (373)
T 2r5t_A           38 SDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKA-----ILKKKEEKHIMSERNVLLKNVKH--------------   98 (373)
T ss_dssp             GGEEEEEEEECCTTCEEEEEEETTTCCEEEEEEEEGGG-----BC-------------CCBCCCCC--------------
T ss_pred             hheEEEEEEeeCCCeEEEEEEEcCCCCEEEEEEEEHHH-----hhhhHHHHHHHHHHHHHHHhCCC--------------
Confidence            67999999999999999999      789999998753     1122334556677766 355665              


Q ss_pred             cccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc---cCCHHHHHHHHHHHHHHHH
Q psy9184         334 LLKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK---YRSPNQTYAMILQVVFSLA  410 (562)
Q Consensus       334 l~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~---~l~e~~i~~I~~QIl~aL~  410 (562)
                                  |||+++++.|.+             .+.+|+||||+.||++.+.+.   .+++..++.++.||+.||.
T Consensus        99 ------------p~Iv~l~~~~~~-------------~~~~~lv~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~  153 (373)
T 2r5t_A           99 ------------PFLVGLHFSFQT-------------ADKLYFVLDYINGGELFYHLQRERCFLEPRARFYAAEIASALG  153 (373)
T ss_dssp             ------------TTBCCEEEEEEC-------------SSEEEEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHH
T ss_pred             ------------CCCCCEEEEEEe-------------CCEEEEEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHH
Confidence                        999999999975             568999999999998877664   4899999999999999999


Q ss_pred             HHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecC-----CcEEEeecCCCccccC
Q psy9184         411 VAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVG-----EKICYYDLSQDEELFE  485 (562)
Q Consensus       411 yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~-----~g~v~~~l~~~pelF~  485 (562)
                      |||+ .||+||||||+|||++.++                    .+||+|||+|+....     ...+++..|++||++.
T Consensus       154 ~LH~-~givHrDlkp~NIll~~~g--------------------~ikL~DFG~a~~~~~~~~~~~~~~gt~~y~aPE~~~  212 (373)
T 2r5t_A          154 YLHS-LNIVYRDLKPENILLDSQG--------------------HIVLTDFGLCKENIEHNSTTSTFCGTPEYLAPEVLH  212 (373)
T ss_dssp             HHHH-TTCCCCCCCGGGEEECTTS--------------------CEEECCCCBCGGGBCCCCCCCSBSCCCCCCCHHHHT
T ss_pred             HHHH-CCceecCCCHHHEEECCCC--------------------CEEEeeCccccccccCCCccccccCCccccCHHHhC
Confidence            9999 7999999999999999887                    799999999986432     2345678899999988


Q ss_pred             CC-CCcHHHHHHHhhcccCCCCCCCCCCChhhhHHHHHHHHhhcccCCCCCCCchhHHHHHHHHHHHhcCCCcCcCC
Q psy9184         486 GE-GDYQFDMYRMMRKQCQNNWQNFTPKNNVFWIHYLVDKATCLKKGYQYLRAPRHQAFELLEELGQNALHFDSCYE  561 (562)
Q Consensus       486 g~-~~~q~dIy~lm~~~~~~~W~~~~P~tn~~wl~yl~~~Ll~~~~~~~~~~~~~~~~~~~l~~l~~~~l~~~s~~~  561 (562)
                      +. .+...|+|++.-. ....+.+..|+.... ..-+...++.....++..-      -..+..|.+.+|+.+...|
T Consensus       213 ~~~~~~~~DiwslG~i-l~ell~G~~Pf~~~~-~~~~~~~i~~~~~~~~~~~------~~~~~~li~~lL~~dp~~R  281 (373)
T 2r5t_A          213 KQPYDRTVDWWCLGAV-LYEMLYGLPPFYSRN-TAEMYDNILNKPLQLKPNI------TNSARHLLEGLLQKDRTKR  281 (373)
T ss_dssp             TCCCCTHHHHHHHHHH-HHHHHHSSCTTCCSB-HHHHHHHHHHSCCCCCSSS------CHHHHHHHHHHTCSSGGGS
T ss_pred             CCCCCchhhhHHHHHH-HHHHHcCCCCCCCCC-HHHHHHHHHhcccCCCCCC------CHHHHHHHHHHcccCHHhC
Confidence            74 5667999875433 333444555553322 1222333343122333221      2356667778887766554

>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A

Probab=99.95  E-value=3e-28  Score=276.10  Aligned_cols=232  Identities=14%  Similarity=0.126  Sum_probs=176.7

Q ss_pred             CCCCCceeeeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCccc
Q psy9184         259 PSSALKNCKKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFT  332 (562)
Q Consensus       259 ~~~~y~~~~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv  332 (562)
                      ..++|++++.||+|+||.||+|      +.||||+++...     .......+.+..|..++..+.+             
T Consensus       339 ~~~~f~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~l~~~~-----~~~~~~~~~~~~E~~~l~~~~~-------------  400 (674)
T 3pfq_A          339 KLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDV-----VIQDDDVECTMVEKRVLALPGK-------------  400 (674)
T ss_dssp             -CTTEEEEEESSBTTTBCEEEEEESSSCCEEEEEEEEHHH-----HHHTTTTHHHHHHHHHHTCTTC-------------
T ss_pred             cccceEEEEEEccCCCEEEEEEEECCCCcEEEEEEEeccc-----cccHHHHHHHHHHHHHHHhccC-------------
Confidence            4478999999999999999999      679999998642     1122334677889999998876             


Q ss_pred             ccccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc---cCCHHHHHHHHHHHHHHH
Q psy9184         333 ELLKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK---YRSPNQTYAMILQVVFSL  409 (562)
Q Consensus       333 ~l~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~---~l~e~~i~~I~~QIl~aL  409 (562)
                                  ||+|+.++++|++             .+.+||||||+.||++...+.   .+++..++.|+.||+.||
T Consensus       401 ------------~~~i~~l~~~~~~-------------~~~~~lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL  455 (674)
T 3pfq_A          401 ------------PPFLTQLHSCFQT-------------MDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGL  455 (674)
T ss_dssp             ------------CTTBCCEEEECBC-------------SSEEEEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHH
T ss_pred             ------------CCeEEEEEEEEEe-------------CCEEEEEEeCcCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHH
Confidence                        6999999999975             558999999999998877764   499999999999999999


Q ss_pred             HHHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecC-----CcEEEeecCCCcccc
Q psy9184         410 AVAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVG-----EKICYYDLSQDEELF  484 (562)
Q Consensus       410 ~yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~-----~g~v~~~l~~~pelF  484 (562)
                      .|||+ .||+||||||+||||+.++                    .+||+|||+|+....     ...+++..|++||++
T Consensus       456 ~~LH~-~gIiHrDLKp~NILl~~~g--------------------~ikL~DFGla~~~~~~~~~~~~~~GT~~Y~APE~l  514 (674)
T 3pfq_A          456 FFLQS-KGIIYRDLKLDNVMLDSEG--------------------HIKIADFGMCKENIWDGVTTKTFCGTPDYIAPEII  514 (674)
T ss_dssp             HHHHH-TSEECCCCCSTTEEECSSS--------------------CEEECCCTTCEECCCTTCCBCCCCSCSSSCCHHHH
T ss_pred             HHHHh-CCeEeccCChhhEEEcCCC--------------------cEEEeecceeeccccCCcccccccCCCcccCHhhh
Confidence            99999 7999999999999999887                    799999999997432     234568889999998


Q ss_pred             CC-CCCcHHHHHHHhhcccCCCCCCCCCCChhhhHHHHHHHHhhcccCCCCCCCchhHHHHHHHHHHHhcCCCcCcCCC
Q psy9184         485 EG-EGDYQFDMYRMMRKQCQNNWQNFTPKNNVFWIHYLVDKATCLKKGYQYLRAPRHQAFELLEELGQNALHFDSCYEM  562 (562)
Q Consensus       485 ~g-~~~~q~dIy~lm~~~~~~~W~~~~P~tn~~wl~yl~~~Ll~~~~~~~~~~~~~~~~~~~l~~l~~~~l~~~s~~~~  562 (562)
                      .+ .++...|||++. ..+.....+..|+.... ...+.+.++.....|+..-      -..+..|.+.||+.+...|+
T Consensus       515 ~~~~~~~~~DvwSlG-vilyelltG~~Pf~~~~-~~~~~~~i~~~~~~~p~~~------s~~~~~li~~lL~~dP~~R~  585 (674)
T 3pfq_A          515 AYQPYGKSVDWWAFG-VLLYEMLAGQAPFEGED-EDELFQSIMEHNVAYPKSM------SKEAVAICKGLMTKHPGKRL  585 (674)
T ss_dssp             TCCCBSTHHHHHHHH-HHHHHHHHSSCSSCCSS-HHHHHHHHHSSCCCCCTTS------CHHHHHHHHHHSCSSSTTCT
T ss_pred             cCCCCCccceEechH-HHHHHHHcCCCCCCCCC-HHHHHHHHHhCCCCCCccC------CHHHHHHHHHHccCCHHHCC
Confidence            76 456669998753 33334445556664332 2233344444234444322      23677788889988877663

>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}

Probab=99.95  E-value=3.1e-28  Score=266.09  Aligned_cols=241  Identities=18%  Similarity=0.230  Sum_probs=173.2

Q ss_pred             CCCceeeeeeccCceEEEEE------eeEEEEEeecCCCCCC-----cchhHHHHHHHHHHHHHHHhcCCccccCCCCCC
Q psy9184         261 SALKNCKKIGEGVYGEVFKL------NNSVIKIMPIEGDQSV-----NGEEQKKFREIFSEIMVTKETSDLQYRTENSTP  329 (562)
Q Consensus       261 ~~y~~~~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~-----~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p  329 (562)
                      ++|+++++||+|+||.||+|      ..||+|++........     ........+.+.+|+.+++.++|          
T Consensus        36 ~~Y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h----------  105 (504)
T 3q5i_A           36 ESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDH----------  105 (504)
T ss_dssp             GTEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEC----------------CTHHHHHHHHHHHHTCCC----------
T ss_pred             cceEEEeEecccCCeEEEEEEECCCCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHhCCC----------
Confidence            57999999999999999999      7899999986531100     00011335678999999999998          


Q ss_pred             cccccccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc---cCCHHHHHHHHHHHH
Q psy9184         330 CFTELLKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK---YRSPNQTYAMILQVV  406 (562)
Q Consensus       330 ~fv~l~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~---~l~e~~i~~I~~QIl  406 (562)
                                      |||++++++|.+             ...+|+|||||.||++.+.+.   .+++..++.++.||+
T Consensus       106 ----------------pniv~~~~~~~~-------------~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qi~  156 (504)
T 3q5i_A          106 ----------------PNIIKLFDVFED-------------KKYFYLVTEFYEGGELFEQIINRHKFDECDAANIMKQIL  156 (504)
T ss_dssp             ----------------TTBCCEEEEEEC-------------SSEEEEEEECCTTCBHHHHHHHHSCCCHHHHHHHHHHHH
T ss_pred             ----------------CCCCeEEEEEEc-------------CCEEEEEEecCCCCcHHHHHHHcCCCCHHHHHHHHHHHH
Confidence                            999999999975             558999999999998877664   489999999999999


Q ss_pred             HHHHHHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecC----CcEEEeecCCCcc
Q psy9184         407 FSLAVAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVG----EKICYYDLSQDEE  482 (562)
Q Consensus       407 ~aL~yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~----~g~v~~~l~~~pe  482 (562)
                      .||.|||+ .||+||||||+|||++..+..                 ..+||+|||+|+....    ...+++..|++||
T Consensus       157 ~~l~~lH~-~~ivH~Dlkp~Nil~~~~~~~-----------------~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE  218 (504)
T 3q5i_A          157 SGICYLHK-HNIVHRDIKPENILLENKNSL-----------------LNIKIVDFGLSSFFSKDYKLRDRLGTAYYIAPE  218 (504)
T ss_dssp             HHHHHHHH-TTEECSCCSGGGEEESSTTCC-----------------SSEEECCCTTCEECCTTSCBCCCCSCTTTCCHH
T ss_pred             HHHHHHHH-CCeEeCCCcHHHEEEecCCCC-----------------ccEEEEECCCCEEcCCCCccccccCCcCCCCHH
Confidence            99999999 799999999999999887521                 2699999999987654    2345688899999


Q ss_pred             ccCCCCCcHHHHHHHhhcccCCCCCCCCCCChhhhHHHHHHHHhhcccCCCCCCCchhHHHHHHHHHHHhcCCCcCcCCC
Q psy9184         483 LFEGEGDYQFDMYRMMRKQCQNNWQNFTPKNNVFWIHYLVDKATCLKKGYQYLRAPRHQAFELLEELGQNALHFDSCYEM  562 (562)
Q Consensus       483 lF~g~~~~q~dIy~lm~~~~~~~W~~~~P~tn~~wl~yl~~~Ll~~~~~~~~~~~~~~~~~~~l~~l~~~~l~~~s~~~~  562 (562)
                      ++.+..+...|||++.-.. ...+.+..|+.....- -+...+......++.  ......-..+.+|.+.||+++...|.
T Consensus       219 ~~~~~~~~~~DiwslG~il-~~ll~g~~pf~~~~~~-~~~~~i~~~~~~~~~--~~~~~~s~~~~~li~~~L~~dp~~R~  294 (504)
T 3q5i_A          219 VLKKKYNEKCDVWSCGVIM-YILLCGYPPFGGQNDQ-DIIKKVEKGKYYFDF--NDWKNISDEAKELIKLMLTYDYNKRC  294 (504)
T ss_dssp             HHTTCBCTHHHHHHHHHHH-HHHHHSSCSSCCSSHH-HHHHHHHHCCCCCCH--HHHTTSCHHHHHHHHHHTCSSTTTSC
T ss_pred             HhccCCCchHHHHHHHHHH-HHHHhCCCCCCCCCHH-HHHHHHHcCCCCCCc--cccCCCCHHHHHHHHHHcCCChhHCC
Confidence            9998888889998864333 2344455555433212 222333331111110  00001134677888899988877663

>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A

Probab=99.95  E-value=2e-28  Score=261.82  Aligned_cols=240  Identities=18%  Similarity=0.204  Sum_probs=160.6

Q ss_pred             CCCceeeeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCccccc
Q psy9184         261 SALKNCKKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTEL  334 (562)
Q Consensus       261 ~~y~~~~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~l  334 (562)
                      ++|.+.+.||+|+||.||+|      +.||||++..................+.+|+.+++.++|               
T Consensus       135 ~~y~~~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h---------------  199 (419)
T 3i6u_A          135 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNH---------------  199 (419)
T ss_dssp             TTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGGTTC--------CCHHHHHHHHHHCCC---------------
T ss_pred             ccEEEEeEEeeCCCeEEEEEEECCCCcEEEEEEEEechhcccccccchhHHHHHHHHHHHHhCCC---------------
Confidence            67999999999999999999      799999998643111111112223457899999999998               


Q ss_pred             ccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc---cCCHHHHHHHHHHHHHHHHH
Q psy9184         335 LKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK---YRSPNQTYAMILQVVFSLAV  411 (562)
Q Consensus       335 ~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~---~l~e~~i~~I~~QIl~aL~y  411 (562)
                                 |||++++++|.              .+..|+||||+.+|++.+.+.   .+++.+++.++.||+.||.|
T Consensus       200 -----------pniv~l~~~~~--------------~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~  254 (419)
T 3i6u_A          200 -----------PCIIKIKNFFD--------------AEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQY  254 (419)
T ss_dssp             -----------TTBCCCCEEEE--------------SSEEEEEEECCTTCBGGGGTSSSCCCCHHHHHHHHHHHHHHHHH
T ss_pred             -----------CCEeeEEEEEe--------------cCceEEEEEcCCCCcHHHHHhccCCCCHHHHHHHHHHHHHHHHH
Confidence                       99999998875              346899999999998877764   48999999999999999999


Q ss_pred             HHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecC----CcEEEeecCCCccccCC-
Q psy9184         412 AEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVG----EKICYYDLSQDEELFEG-  486 (562)
Q Consensus       412 LH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~----~g~v~~~l~~~pelF~g-  486 (562)
                      ||+ .+|+||||||+|||++..+..                 ..+||+|||+|+....    ....++..|++||++.+ 
T Consensus       255 LH~-~~ivHrDlkp~NIll~~~~~~-----------------~~~kl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~  316 (419)
T 3i6u_A          255 LHE-NGIIHRDLKPENVLLSSQEED-----------------CLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVLVSV  316 (419)
T ss_dssp             HHH-TTCCCSCCCGGGEEESSSSSS-----------------CCEEECCSSTTTSCC-----------CTTCCTTTTC--
T ss_pred             HHH-CCccccCCChHhEEEecCCCc-----------------ceEEEeecccceecCCCccccccCCCCCccCceeeecC
Confidence            999 799999999999999876421                 2699999999987654    23456889999999864 


Q ss_pred             ---CCCcHHHHHHHhhcccCCCCCCCCCCChhhhHHHHHHHHhhcccCCCCCCCchhHHHHHHHHHHHhcCCCcCcCC
Q psy9184         487 ---EGDYQFDMYRMMRKQCQNNWQNFTPKNNVFWIHYLVDKATCLKKGYQYLRAPRHQAFELLEELGQNALHFDSCYE  561 (562)
Q Consensus       487 ---~~~~q~dIy~lm~~~~~~~W~~~~P~tn~~wl~yl~~~Ll~~~~~~~~~~~~~~~~~~~l~~l~~~~l~~~s~~~  561 (562)
                         ..+.+.|||++.-... ..+.+..|+........+...+..  ..+..........-..+.+|...||.++...|
T Consensus       317 ~~~~~~~~~DiwslG~il~-~lltg~~pf~~~~~~~~~~~~i~~--~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R  391 (419)
T 3i6u_A          317 GTAGYNRAVDCWSLGVILF-ICLSGYPPFSEHRTQVSLKDQITS--GKYNFIPEVWAEVSEKALDLVKKLLVVDPKAR  391 (419)
T ss_dssp             --CTTHHHHHHHHHHHHHH-HHHHSSCSSCCCSSSCCHHHHHHT--TCCCCCHHHHTTSCHHHHHHHHHHSCSSTTTS
T ss_pred             CCCCCCchhhhHhHHHHHH-HHHHCCCCCCCCcchHHHHHHHhc--CCCCCCchhhcccCHHHHHHHHHHccCChhHC
Confidence               2344689988543332 233333343221100011111222  11111100000113467777888888877665

>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*

Probab=99.95  E-value=7.2e-29  Score=266.84  Aligned_cols=230  Identities=17%  Similarity=0.153  Sum_probs=163.4

Q ss_pred             CCCCceeeeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCcccc
Q psy9184         260 SSALKNCKKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTE  333 (562)
Q Consensus       260 ~~~y~~~~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~  333 (562)
                      .++|++.++||+|+||.||+|      +.||||++....     .........+.+|+.+++.++|              
T Consensus       147 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~-----~~~~~~~~~~~~e~~~l~~l~h--------------  207 (446)
T 4ejn_A          147 MNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEV-----IVAKDEVAHTLTENRVLQNSRH--------------  207 (446)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHH-----HC-------------CCCCCSC--------------
T ss_pred             hHHcEEeEEEeeCcCEEEEEEEEcCCCCEEEEEEEEhhh-----hhhhHHHHHHHHHHHHHHhCCC--------------
Confidence            367999999999999999999      799999998542     1123334567889999999888              


Q ss_pred             cccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc---cCCHHHHHHHHHHHHHHHH
Q psy9184         334 LLKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK---YRSPNQTYAMILQVVFSLA  410 (562)
Q Consensus       334 l~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~---~l~e~~i~~I~~QIl~aL~  410 (562)
                                  |||++++++|.+             .+.+|+||||++||++...+.   .+++..++.++.||+.||+
T Consensus       208 ------------~~iv~l~~~~~~-------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~  262 (446)
T 4ejn_A          208 ------------PFLTALKYSFQT-------------HDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALD  262 (446)
T ss_dssp             ------------TTSCCEEEEEEE-------------TTEEEEEECCCSSCBHHHHHHHHSCCCHHHHHHHHHHHHHHHH
T ss_pred             ------------CeEeeEEEEEee-------------CCEEEEEEeeCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHH
Confidence                        999999999876             558999999999998866664   4899999999999999999


Q ss_pred             HHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecC-----CcEEEeecCCCccccC
Q psy9184         411 VAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVG-----EKICYYDLSQDEELFE  485 (562)
Q Consensus       411 yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~-----~g~v~~~l~~~pelF~  485 (562)
                      |||+..||+||||||+|||++.++                    .+||+|||+|+....     ...+++..|++||++.
T Consensus       263 ~LH~~~giiHrDlkp~NIll~~~~--------------------~~kl~DFG~a~~~~~~~~~~~~~~gt~~y~aPE~~~  322 (446)
T 4ejn_A          263 YLHSEKNVVYRDLKLENLMLDKDG--------------------HIKITDFGLCKEGIKDGATMKTFCGTPEYLAPEVLE  322 (446)
T ss_dssp             HHHHHTCCCCCCCCGGGEEECSSS--------------------CEEECCCCCCCTTCC-----CCSSSCGGGCCHHHHH
T ss_pred             HHhhcCCEEECCCCHHHEEECCCC--------------------CEEEccCCCceeccCCCcccccccCCccccCHhhcC
Confidence            999735999999999999999886                    799999999986433     2234577899999887


Q ss_pred             C-CCCcHHHHHHHhhcccCCCCCCCCCCChhhhHHHHHHHHhhcccCCCCCCCchhHHHHHHHHHHHhcCCCcCcCC
Q psy9184         486 G-EGDYQFDMYRMMRKQCQNNWQNFTPKNNVFWIHYLVDKATCLKKGYQYLRAPRHQAFELLEELGQNALHFDSCYE  561 (562)
Q Consensus       486 g-~~~~q~dIy~lm~~~~~~~W~~~~P~tn~~wl~yl~~~Ll~~~~~~~~~~~~~~~~~~~l~~l~~~~l~~~s~~~  561 (562)
                      + ..+...|||++.-.. .....+..|+.+...... ...+......++..-      -..+..|...||.++...|
T Consensus       323 ~~~~~~~~DiwslG~il-~ell~g~~Pf~~~~~~~~-~~~i~~~~~~~p~~~------~~~~~~li~~~L~~dP~~R  391 (446)
T 4ejn_A          323 DNDYGRAVDWWGLGVVM-YEMMCGRLPFYNQDHEKL-FELILMEEIRFPRTL------GPEAKSLLSGLLKKDPKQR  391 (446)
T ss_dssp             TSCCCTHHHHHHHHHHH-HHHHHSSCSSCCSSHHHH-HHHHHHCCCCCCTTS------CHHHHHHHHHHTCSSTTTS
T ss_pred             CCCCCCccchhhhHHHH-HHHhhCCCCCCCCCHHHH-HHHHHhCCCCCCccC------CHHHHHHHHHHcccCHHHh
Confidence            6 456679998854333 333445555543332222 222333133333322      2356778888898887766

>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*

Probab=99.95  E-value=8.8e-29  Score=268.43  Aligned_cols=235  Identities=19%  Similarity=0.257  Sum_probs=174.8

Q ss_pred             CCCceeeeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCccccc
Q psy9184         261 SALKNCKKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTEL  334 (562)
Q Consensus       261 ~~y~~~~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~l  334 (562)
                      ++|++.+.||+|+||.||+|      +.||||++.....     ........+.+|+.+++.++|               
T Consensus        26 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~-----~~~~~~~~~~~E~~~l~~l~h---------------   85 (484)
T 3nyv_A           26 DRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQV-----KQKTDKESLLREVQLLKQLDH---------------   85 (484)
T ss_dssp             HHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTC-----CBSSCHHHHHHHHHHHTTCCC---------------
T ss_pred             CceEEeeEEecCCCEEEEEEEECCCCCEEEEEEEEhhhc-----ccchHHHHHHHHHHHHHhCCC---------------
Confidence            56899999999999999999      7899999986532     112234678899999999988               


Q ss_pred             ccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc---cCCHHHHHHHHHHHHHHHHH
Q psy9184         335 LKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK---YRSPNQTYAMILQVVFSLAV  411 (562)
Q Consensus       335 ~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~---~l~e~~i~~I~~QIl~aL~y  411 (562)
                                 |||++++++|.+             .+.+|+|||||.||++.+.+.   .+++.+++.++.||+.||.|
T Consensus        86 -----------pniv~~~~~~~~-------------~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~i~~qi~~~l~~  141 (484)
T 3nyv_A           86 -----------PNIMKLYEFFED-------------KGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITY  141 (484)
T ss_dssp             -----------TTBCCEEEEEEC-------------SSEEEEEECCCCSCBHHHHHHTCSCCBHHHHHHHHHHHHHHHHH
T ss_pred             -----------CCCCcEEEEEEe-------------CCEEEEEEecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHH
Confidence                       999999999875             558999999999998877663   48999999999999999999


Q ss_pred             HHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecCC----cEEEeecCCCccccCCC
Q psy9184         412 AEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVGE----KICYYDLSQDEELFEGE  487 (562)
Q Consensus       412 LH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~~----g~v~~~l~~~pelF~g~  487 (562)
                      ||+ .||+||||||+|||++..+..                 ..+||+|||+|+.....    ..+++..|++||++.+.
T Consensus       142 lH~-~~ivH~Dlkp~Nil~~~~~~~-----------------~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~  203 (484)
T 3nyv_A          142 MHK-NKIVHRDLKPENLLLESKSKD-----------------ANIRIIDFGLSTHFEASKKMKDKIGTAYYIAPEVLHGT  203 (484)
T ss_dssp             HHH-TTCCCSCCCGGGEEESSSSTT-----------------CCEEECCTTHHHHBCCCCSHHHHTTGGGTCCHHHHHTC
T ss_pred             HHH-CCeeeCCCCHHHEEEecCCCC-----------------CcEEEEeeeeeEEcccccccccCCCCccccCceeecCC
Confidence            999 799999999999999643211                 17999999999876542    23457889999999998


Q ss_pred             CCcHHHHHHHhhcccCCCCCCCCCCChhhhHHHHHHHHhhcccCCCCCCCchhHHHHHHHHHHHhcCCCcCcCC
Q psy9184         488 GDYQFDMYRMMRKQCQNNWQNFTPKNNVFWIHYLVDKATCLKKGYQYLRAPRHQAFELLEELGQNALHFDSCYE  561 (562)
Q Consensus       488 ~~~q~dIy~lm~~~~~~~W~~~~P~tn~~wl~yl~~~Ll~~~~~~~~~~~~~~~~~~~l~~l~~~~l~~~s~~~  561 (562)
                      .+...|||++.-. ....+.+..|+....... +...+......+..  ......-..+..|.+.+|+++...|
T Consensus       204 ~~~~~DiwslG~i-l~~ll~g~~pf~~~~~~~-~~~~i~~~~~~~~~--~~~~~~s~~~~~li~~~L~~dp~~R  273 (484)
T 3nyv_A          204 YDEKCDVWSTGVI-LYILLSGCPPFNGANEYD-ILKKVEKGKYTFEL--PQWKKVSESAKDLIRKMLTYVPSMR  273 (484)
T ss_dssp             CCTHHHHHHHHHH-HHHHHHSSCSSCCSSHHH-HHHHHHHCCCCCCS--GGGGGSCHHHHHHHHHHTCSSGGGS
T ss_pred             CCCcceeHHHHHH-HHHHHHCCCCCCCCCHHH-HHHHHHcCCCCCCC--cccccCCHHHHHHHHHHCCCChhHC
Confidence            8888999885433 333444555554332122 22233331222221  1111224567788899998887765

>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}

Probab=99.95  E-value=1.8e-28  Score=262.56  Aligned_cols=189  Identities=16%  Similarity=0.182  Sum_probs=153.3

Q ss_pred             CCCCCceeeeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCccc
Q psy9184         259 PSSALKNCKKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFT  332 (562)
Q Consensus       259 ~~~~y~~~~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv  332 (562)
                      ..++|++.+.||+|+||.||+|      +.||||++....     .........+.+|..++..++|             
T Consensus        59 ~~~~f~~~~~lG~G~fG~V~~~~~~~~~~~vAiK~l~k~~-----~~~~~~~~~~~~E~~il~~~~h-------------  120 (412)
T 2vd5_A           59 QRDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWD-----MLKRGEVSCFREERDVLVNGDR-------------  120 (412)
T ss_dssp             CGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHH-----HHHHGGGCCHHHHHHHHHHSCT-------------
T ss_pred             ChhhEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHH-----hhhHHHHHHHHHHHHHHHhcCC-------------
Confidence            4478999999999999999999      789999998532     1122334557889999999988             


Q ss_pred             ccccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc----cCCHHHHHHHHHHHHHH
Q psy9184         333 ELLKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK----YRSPNQTYAMILQVVFS  408 (562)
Q Consensus       333 ~l~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~----~l~e~~i~~I~~QIl~a  408 (562)
                                   |||++++++|.+             ++.+|+||||++||++.+.+.    .+++..++.++.||+.|
T Consensus       121 -------------p~Iv~l~~~~~~-------------~~~~~lVmE~~~gg~L~~~l~~~~~~l~~~~~~~~~~qi~~a  174 (412)
T 2vd5_A          121 -------------RWITQLHFAFQD-------------ENYLYLVMEYYVGGDLLTLLSKFGERIPAEMARFYLAEIVMA  174 (412)
T ss_dssp             -------------TTBCCEEEEEEC-------------SSEEEEEECCCCSCBHHHHHHHHSSCCCHHHHHHHHHHHHHH
T ss_pred             -------------CCeeeEEEEEee-------------CCEEEEEEcCCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHH
Confidence                         999999999986             568999999999998877663    48999999999999999


Q ss_pred             HHHHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecCCc------EEEeecCCCcc
Q psy9184         409 LAVAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVGEK------ICYYDLSQDEE  482 (562)
Q Consensus       409 L~yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~~g------~v~~~l~~~pe  482 (562)
                      |.|||+ +||+||||||+|||++.++                    .+||+|||+|+.....+      .+++..|++||
T Consensus       175 L~~LH~-~giiHrDLKp~NILld~~g--------------------~vkL~DFGla~~~~~~~~~~~~~~~Gt~~Y~APE  233 (412)
T 2vd5_A          175 IDSVHR-LGYVHRDIKPDNILLDRCG--------------------HIRLADFGSCLKLRADGTVRSLVAVGTPDYLSPE  233 (412)
T ss_dssp             HHHHHH-TTEECCCCSGGGEEECTTS--------------------CEEECCCTTCEECCTTSCEECSSCCSCGGGCCHH
T ss_pred             HHHHHH-CCeeecccCHHHeeecCCC--------------------CEEEeechhheeccCCCccccceeccccCcCCHH
Confidence            999999 7999999999999999887                    79999999998875432      35688899999


Q ss_pred             ccCC--------CCCcHHHHHHHhhcccCCCCCCCCCCC
Q psy9184         483 LFEG--------EGDYQFDMYRMMRKQCQNNWQNFTPKN  513 (562)
Q Consensus       483 lF~g--------~~~~q~dIy~lm~~~~~~~W~~~~P~t  513 (562)
                      ++.+        ..+...|+|++.- .....+.+..|+.
T Consensus       234 ~l~~~~~~~~~~~~~~~~DiwSlGv-ilyelltG~~Pf~  271 (412)
T 2vd5_A          234 ILQAVGGGPGTGSYGPECDWWALGV-FAYEMFYGQTPFY  271 (412)
T ss_dssp             HHHHHHTCTTCSEECTHHHHHHHHH-HHHHHHHSSCTTC
T ss_pred             HHhhcccCcCCCCCChHHhhhHHhH-HHHHHHhCCCCCC
Confidence            9862        3456699987533 3334445555553

>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}

Probab=99.95  E-value=8.3e-28  Score=245.04  Aligned_cols=238  Identities=15%  Similarity=0.179  Sum_probs=161.7

Q ss_pred             CCCceeeeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCccccc
Q psy9184         261 SALKNCKKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTEL  334 (562)
Q Consensus       261 ~~y~~~~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~l  334 (562)
                      ++|++.+.||+|+||.||+|      +.||||++....       .....+.+.+|+.+++.++|               
T Consensus         6 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~-------~~~~~~~~~~E~~~l~~l~h---------------   63 (332)
T 3qd2_B            6 TDFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPN-------RELAREKVMREVKALAKLEH---------------   63 (332)
T ss_dssp             HHEEEEEEEECC-CSEEEEEEETTTCCEEEEEEEECCS-------TTTHHHHHHHHHHHHTSCCC---------------
T ss_pred             hcCceeeEecCCCCeEEEEEEEcCCCcEEEEEEeecCC-------chhHHHHHHHHHHHHHhCCC---------------
Confidence            45899999999999999999      789999998653       12344678999999999998               


Q ss_pred             ccccccCCCCCCCceeehhhhhccccC--------------------------------------------CCCCCCCCC
Q psy9184         335 LKCSCVRGRYPDRLVTLWEEFAKTKKS--------------------------------------------YNDHPSMFE  370 (562)
Q Consensus       335 ~~~~iv~g~~~pnIv~l~~~f~~~~~s--------------------------------------------~~~~p~~~~  370 (562)
                                 |||++++++|.+....                                            .........
T Consensus        64 -----------pniv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  132 (332)
T 3qd2_B           64 -----------PGIVRYFNAWLETPPEKWQEEMDEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSP  132 (332)
T ss_dssp             -----------TTBCCEEEEEEECCSCHHHHHHHC--------------------------------------------C
T ss_pred             -----------CCEeeEEEEEEEeccchhhhhhhhhhhccccccccccCCCcccccccceeeccccCcccccccccCCCC
Confidence                       5555555554321100                                            000000112


Q ss_pred             CCeEEEEEEecCCCCCcccccc------CCHHHHHHHHHHHHHHHHHHHhhCCeEeccCCCCCEEEccCCCCCcccccCC
Q psy9184         371 EDQIFIILELKNGGNDSGDIKY------RSPNQTYAMILQVVFSLAVAEVELEFEHRDLHMSNILVLQTDQDESSFTLDD  444 (562)
Q Consensus       371 ~~~l~LVmE~~~gG~ll~~l~~------l~e~~i~~I~~QIl~aL~yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~  444 (562)
                      ...+|+|||||.||++.+.+..      .++..++.++.||+.||.|||+ .||+||||||+|||++.++          
T Consensus       133 ~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~-~~ivH~Dlkp~NIll~~~~----------  201 (332)
T 3qd2_B          133 KVYLYIQMQLCRKENLKDWMNRRCSLEDREHGVCLHIFIQIAEAVEFLHS-KGLMHRDLKPSNIFFTMDD----------  201 (332)
T ss_dssp             CCEEEEEEECCCSSCHHHHHHTCCSGGGSCHHHHHHHHHHHHHHHHHHHH-TTEECCCCCGGGEEECTTC----------
T ss_pred             CceEEEEEEecCCCCHHHHHhcccCccchhhHHHHHHHHHHHHHHHHHHh-CCeeecCCCcccEEEeCCC----------
Confidence            3458999999999987665542      5666799999999999999999 7999999999999999886          


Q ss_pred             cccccccCCceEEEEeccceeeecCC-----------------cEEEeecCCCccccCC-CCCcHHHHHHHhhcccCCCC
Q psy9184         445 THYAMKTAGVQVTIIDFTISRCFVGE-----------------KICYYDLSQDEELFEG-EGDYQFDMYRMMRKQCQNNW  506 (562)
Q Consensus       445 ~~~~~~~~g~~vKL~DFGLSr~~~~~-----------------g~v~~~l~~~pelF~g-~~~~q~dIy~lm~~~~~~~W  506 (562)
                                .+||+|||+|+.....                 +..++..|++||++.+ ..+...|||++.-... ..+
T Consensus       202 ----------~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~-el~  270 (332)
T 3qd2_B          202 ----------VVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQVGTKLYMSPEQIHGNNYSHKVDIFSLGLILF-ELL  270 (332)
T ss_dssp             ----------CEEECCCTTCEECSCC--------------CCCSCC-CGGGSCHHHHHCCCCCTHHHHHHHHHHHH-HHH
T ss_pred             ----------CEEEeecCcccccccchhhccccccccccccccccCCCcCccChHHhcCCCCcchhhHHHHHHHHH-HHH
Confidence                      7999999999876542                 2346788999998877 4566799988644433 333


Q ss_pred             CCCCCCChhhhHHHHHHHHhhcccCCCCCCCchhHHHHHHHHHHHhcCCCcCcCC
Q psy9184         507 QNFTPKNNVFWIHYLVDKATCLKKGYQYLRAPRHQAFELLEELGQNALHFDSCYE  561 (562)
Q Consensus       507 ~~~~P~tn~~wl~yl~~~Ll~~~~~~~~~~~~~~~~~~~l~~l~~~~l~~~s~~~  561 (562)
                      .++.|..+..   .+......  ..++   .........+.+|...+|..+...|
T Consensus       271 ~~~~~~~~~~---~~~~~~~~--~~~~---~~~~~~~~~~~~li~~~l~~~p~~R  317 (332)
T 3qd2_B          271 YSFSTQMERV---RIITDVRN--LKFP---LLFTQKYPQEHMMVQDMLSPSPTER  317 (332)
T ss_dssp             SCCCCHHHHH---HHHHHHHT--TCCC---HHHHHHCHHHHHHHHHHHCSSGGGS
T ss_pred             HcCCChhHHH---HHHHHhhc--cCCC---cccccCChhHHHHHHHHccCCCCcC
Confidence            4454442221   11122222  1111   1112224566778888888887665

>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}

Probab=99.95  E-value=1.1e-27  Score=247.02  Aligned_cols=176  Identities=19%  Similarity=0.139  Sum_probs=143.7

Q ss_pred             cCCCCCCceeeeeeccCceEEEEE---------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCC
Q psy9184         257 RYPSSALKNCKKIGEGVYGEVFKL---------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENS  327 (562)
Q Consensus       257 ~~~~~~y~~~~~LG~GsfG~Vyka---------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~  327 (562)
                      .+..++|++.+.||+|+||.||+|         ..||||++....       .....+.+.+|+.+++.++|        
T Consensus        45 ~~~~~~y~i~~~lG~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~-------~~~~~~~~~~E~~~l~~l~h--------  109 (325)
T 3kul_A           45 EIEASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGY-------TERQRRDFLSEASIMGQFDH--------  109 (325)
T ss_dssp             BCCGGGEEEEEEEEETTTEEEEEEEECCTTSCCEEEEEEEECTTC-------CHHHHHHHHHHHHHHTTCCC--------
T ss_pred             ccChhHeEEeeEEEeCCCcEEEEEEEecCCCCCceEEEEecCCCC-------CHHHHHHHHHHHHHHHhCCC--------
Confidence            344578999999999999999999         249999998542       23445678999999999998        


Q ss_pred             CCcccccccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc----cCCHHHHHHHHH
Q psy9184         328 TPCFTELLKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK----YRSPNQTYAMIL  403 (562)
Q Consensus       328 ~p~fv~l~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~----~l~e~~i~~I~~  403 (562)
                                        |||+++++++.+             ++..|+||||+.||++.+.+.    .+++.+++.++.
T Consensus       110 ------------------~~iv~~~~~~~~-------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~  158 (325)
T 3kul_A          110 ------------------PNIIRLEGVVTR-------------GRLAMIVTEYMENGSLDTFLRTHDGQFTIMQLVGMLR  158 (325)
T ss_dssp             ------------------TTBCCEEEEECG-------------GGCCEEEEECCTTCBHHHHHHTTTTCSCHHHHHHHHH
T ss_pred             ------------------CCCCcEEEEEEe-------------CCccEEEeeCCCCCcHHHHHHhcccCCCHHHHHHHHH
Confidence                              999999999875             447899999999998766653    489999999999


Q ss_pred             HHHHHHHHHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecCC--------cEEEe
Q psy9184         404 QVVFSLAVAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVGE--------KICYY  475 (562)
Q Consensus       404 QIl~aL~yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~~--------g~v~~  475 (562)
                      ||+.||.|||+ .||+||||||+|||++.++                    .+||+|||+++.....        +..++
T Consensus       159 qi~~~L~~LH~-~~ivH~Dlkp~NIll~~~~--------------------~~kl~Dfg~a~~~~~~~~~~~~~~~~~~t  217 (325)
T 3kul_A          159 GVGAGMRYLSD-LGYVHRDLAARNVLVDSNL--------------------VCKVSDFGLSRVLEDDPDAAYTTTGGKIP  217 (325)
T ss_dssp             HHHHHHHHHHH-TTEECSCCSGGGEEECTTC--------------------CEEECCCSSCEECC----CCEECC---CC
T ss_pred             HHHHHHHHHHH-CCeeCCCCCcceEEECCCC--------------------CEEECCCCcccccccCccceeeccCCCCc
Confidence            99999999999 7999999999999998876                    7999999999976541        12224


Q ss_pred             ecCCCccccCC-CCCcHHHHHHHhh
Q psy9184         476 DLSQDEELFEG-EGDYQFDMYRMMR  499 (562)
Q Consensus       476 ~l~~~pelF~g-~~~~q~dIy~lm~  499 (562)
                      ..|++||++.+ ..+...|||++.-
T Consensus       218 ~~y~aPE~~~~~~~~~~~Di~slG~  242 (325)
T 3kul_A          218 IRWTAPEAIAFRTFSSASDVWSFGV  242 (325)
T ss_dssp             GGGSCHHHHHHCEECHHHHHHHHHH
T ss_pred             ccccCHhHhcCCCCCcHHHHHHHHH
Confidence            46899998875 3455689988543

>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}

Probab=99.95  E-value=9e-28  Score=247.69  Aligned_cols=239  Identities=16%  Similarity=0.157  Sum_probs=171.4

Q ss_pred             CCCceeeeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCccccc
Q psy9184         261 SALKNCKKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTEL  334 (562)
Q Consensus       261 ~~y~~~~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~l  334 (562)
                      ++|.+.+.||+|+||.||+|      +.||+|++.........  .....+.+.+|+.+++.++|               
T Consensus        11 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~--~~~~~~~~~~E~~~l~~l~h---------------   73 (326)
T 2y0a_A           11 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSR--RGVSREDIEREVSILKEIQH---------------   73 (326)
T ss_dssp             HHEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEBCCSTTCS--SSBCHHHHHHHHHHHHHCCC---------------
T ss_pred             cceEeceEEeeCCCeEEEEEEECCCCcEEEEEEEEcccccccc--chhhHHHHHHHHHHHHhCCC---------------
Confidence            46899999999999999999      78999999875421110  11134678899999999998               


Q ss_pred             ccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc---cCCHHHHHHHHHHHHHHHHH
Q psy9184         335 LKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK---YRSPNQTYAMILQVVFSLAV  411 (562)
Q Consensus       335 ~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~---~l~e~~i~~I~~QIl~aL~y  411 (562)
                                 |||++++++|.+             .+.+|+||||+.||++.+.+.   .+++.+++.++.||+.||.|
T Consensus        74 -----------p~iv~~~~~~~~-------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~al~~  129 (326)
T 2y0a_A           74 -----------PNVITLHEVYEN-------------KTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYY  129 (326)
T ss_dssp             -----------TTBCCEEEEEEC-------------SSEEEEEEECCCSCBHHHHHTTSSCCBHHHHHHHHHHHHHHHHH
T ss_pred             -----------CCCCcEEEEEEe-------------CCEEEEEEEcCCCCCHHHHHHhcCCcCHHHHHHHHHHHHHHHHH
Confidence                       999999999875             558999999999998877664   38999999999999999999


Q ss_pred             HHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecC----CcEEEeecCCCccccCC-
Q psy9184         412 AEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVG----EKICYYDLSQDEELFEG-  486 (562)
Q Consensus       412 LH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~----~g~v~~~l~~~pelF~g-  486 (562)
                      ||+ .||+||||||+|||++.++..                ...+||+|||+|+....    ....++..|++||++.+ 
T Consensus       130 lH~-~~ivH~Dlkp~NIll~~~~~~----------------~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~  192 (326)
T 2y0a_A          130 LHS-LQIAHFDLKPENIMLLDRNVP----------------KPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYE  192 (326)
T ss_dssp             HHH-TTEECCCCCGGGEEESCSSSS----------------SCCEEECCCTTCEECCTTSCCCCCCSCTTTCCHHHHTTC
T ss_pred             HHH-CCeEcCCCCHHHEEEecCCCC----------------CCCEEEEECCCCeECCCCCccccccCCcCcCCceeecCC
Confidence            999 799999999999999877521                12699999999988753    23446778999999876 


Q ss_pred             CCCcHHHHHHHhhcccCCCCCCCCCCChhhhHHHHHHHHhhcccCCCCCCCchhHHHHHHHHHHHhcCCCcCcCC
Q psy9184         487 EGDYQFDMYRMMRKQCQNNWQNFTPKNNVFWIHYLVDKATCLKKGYQYLRAPRHQAFELLEELGQNALHFDSCYE  561 (562)
Q Consensus       487 ~~~~q~dIy~lm~~~~~~~W~~~~P~tn~~wl~yl~~~Ll~~~~~~~~~~~~~~~~~~~l~~l~~~~l~~~s~~~  561 (562)
                      ..+...|||++.-.. ...+.+..|+........ ...+......+..  ......-..+.+|.+.||..+...|
T Consensus       193 ~~~~~~DiwslG~il-~~ll~g~~pf~~~~~~~~-~~~~~~~~~~~~~--~~~~~~~~~~~~li~~~L~~dP~~R  263 (326)
T 2y0a_A          193 PLGLEADMWSIGVIT-YILLSGASPFLGDTKQET-LANVSAVNYEFED--EYFSNTSALAKDFIRRLLVKDPKKR  263 (326)
T ss_dssp             CCCTHHHHHHHHHHH-HHHHHSCCSSCCSSHHHH-HHHHHHTCCCCCH--HHHTTSCHHHHHHHHHHSCSSGGGS
T ss_pred             CCCcHHHHHHHHHHH-HHHHHCcCCCCCCCHHHH-HHHHHhcCCCcCc--cccccCCHHHHHHHHHHccCChhhC
Confidence            456679998864333 234444555532221111 1222220111111  0000113467778888888887665

>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A

Probab=99.95  E-value=3e-28  Score=255.36  Aligned_cols=231  Identities=16%  Similarity=0.111  Sum_probs=163.9

Q ss_pred             CCCCCceeeeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCccc
Q psy9184         259 PSSALKNCKKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFT  332 (562)
Q Consensus       259 ~~~~y~~~~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv  332 (562)
                      ..++|++.+.||+|+||.||+|      +.||||++.....         ..+.+.+|+.+++.++|             
T Consensus        18 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~---------~~~~~~~E~~~l~~l~h-------------   75 (361)
T 3uc3_A           18 DSDRYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGAA---------IDENVQREIINHRSLRH-------------   75 (361)
T ss_dssp             CTTTEEEEEEESSSTTSSEEEEEETTTCCEEEEEEEESSTT---------SCHHHHHHHHHHHHCCC-------------
T ss_pred             CCCcEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEecCcc---------ccHHHHHHHHHHHhCCC-------------
Confidence            3478999999999999999999      7899999986431         11457799999999998             


Q ss_pred             ccccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc---cCCHHHHHHHHHHHHHHH
Q psy9184         333 ELLKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK---YRSPNQTYAMILQVVFSL  409 (562)
Q Consensus       333 ~l~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~---~l~e~~i~~I~~QIl~aL  409 (562)
                                   |||++++++|.+             .+.+|+||||+.||++.+.+.   .+++..++.++.||+.||
T Consensus        76 -------------pniv~~~~~~~~-------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~ql~~~L  129 (361)
T 3uc3_A           76 -------------PNIVRFKEVILT-------------PTHLAIIMEYASGGELYERICNAGRFSEDEARFFFQQLLSGV  129 (361)
T ss_dssp             -------------TTBCCEEEEEEC-------------SSEEEEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHH
T ss_pred             -------------CCCCcEEEEEee-------------CCEEEEEEEeCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHH
Confidence                         999999999875             558999999999998877663   499999999999999999


Q ss_pred             HHHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecC----CcEEEeecCCCccccC
Q psy9184         410 AVAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVG----EKICYYDLSQDEELFE  485 (562)
Q Consensus       410 ~yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~----~g~v~~~l~~~pelF~  485 (562)
                      .|||+ .||+||||||+|||++.++.                  ..+||+|||+|+....    ...+++..|++||++.
T Consensus       130 ~~LH~-~~ivH~Dlkp~Nill~~~~~------------------~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~  190 (361)
T 3uc3_A          130 SYCHS-MQICHRDLKLENTLLDGSPA------------------PRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLL  190 (361)
T ss_dssp             HHHHH-TTCCSCCCCGGGEEECSSSS------------------CCEEECCCCCC---------------CTTSCHHHHH
T ss_pred             HHHHH-CCcccCCCCHHHEEEcCCCC------------------ceEEEeecCccccccccCCCCCCcCCCCcCChhhhc
Confidence            99999 79999999999999987652                  1599999999985432    3456788999999887


Q ss_pred             CCC-CcH-HHHHHHhhcccCCCCCCCCCCChh---hhHHHHHHHHhhcccCCCCCCCchhHHHHHHHHHHHhcCCCcCcC
Q psy9184         486 GEG-DYQ-FDMYRMMRKQCQNNWQNFTPKNNV---FWIHYLVDKATCLKKGYQYLRAPRHQAFELLEELGQNALHFDSCY  560 (562)
Q Consensus       486 g~~-~~q-~dIy~lm~~~~~~~W~~~~P~tn~---~wl~yl~~~Ll~~~~~~~~~~~~~~~~~~~l~~l~~~~l~~~s~~  560 (562)
                      +.. ... .|||++.-... ..+.+..|+...   ..+..+...++.....++....    .-..+..|..++|+++...
T Consensus       191 ~~~~~~~~~DiwslG~il~-ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~s~~~~~li~~~L~~dP~~  265 (361)
T 3uc3_A          191 RQEYDGKIADVWSCGVTLY-VMLVGAYPFEDPEEPRDYRKTIQRILSVKYSIPDDIR----ISPECCHLISRIFVADPAT  265 (361)
T ss_dssp             CSSCCHHHHHHHHHHHHHH-HHHHSSCSCC----CCCHHHHHHHHHTTCCCCCTTSC----CCHHHHHHHHHHSCSCTTT
T ss_pred             CCCCCCCeeeeehhHHHHH-HHHhCCCCCCCCccHHHHHHHHHHHhcCCCCCCCcCC----CCHHHHHHHHHHccCChhH
Confidence            643 333 79988643332 333344444221   1122233334432222322211    1235677888888888776


Q ss_pred             C
Q psy9184         561 E  561 (562)
Q Consensus       561 ~  561 (562)
                      |
T Consensus       266 R  266 (361)
T 3uc3_A          266 R  266 (361)
T ss_dssp             S
T ss_pred             C
Confidence            5

>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A

Probab=99.95  E-value=9.1e-28  Score=252.51  Aligned_cols=173  Identities=19%  Similarity=0.265  Sum_probs=143.1

Q ss_pred             CCCCCceeeeeeccCceEEEEE-------------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhc-CCccccC
Q psy9184         259 PSSALKNCKKIGEGVYGEVFKL-------------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKET-SDLQYRT  324 (562)
Q Consensus       259 ~~~~y~~~~~LG~GsfG~Vyka-------------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L-~h~~~~~  324 (562)
                      ..++|++.+.||+|+||.||+|             ..||||+++...       .....+.+.+|+.+++.+ +|     
T Consensus        79 ~~~~~~~~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~-------~~~~~~~~~~E~~~l~~l~~h-----  146 (370)
T 2psq_A           79 PRDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDA-------TEKDLSDLVSEMEMMKMIGKH-----  146 (370)
T ss_dssp             CGGGEEEEEEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTTC-------BHHHHHHHHHHHHHHHHSCCC-----
T ss_pred             cHHHCEeeeEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEecCCc-------CHHHHHHHHHHHHHHHHhcCC-----
Confidence            4478999999999999999999             259999997642       345567889999999999 56     


Q ss_pred             CCCCCcccccccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc-------------
Q psy9184         325 ENSTPCFTELLKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK-------------  391 (562)
Q Consensus       325 ~n~~p~fv~l~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~-------------  391 (562)
                                           |||+++++++.+             ++.+|+||||+.||++.+.+.             
T Consensus       147 ---------------------pnIv~~~~~~~~-------------~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~  192 (370)
T 2psq_A          147 ---------------------KNIINLLGACTQ-------------DGPLYVIVEYASKGNLREYLRARRPPGMEYSYDI  192 (370)
T ss_dssp             ---------------------TTBCCEEEEECS-------------SSSCEEEEECCTTCBHHHHHHHTCCC--------
T ss_pred             ---------------------CCEeeEEEEEcc-------------CCCEEEEEEcCCCCCHHHHHHhhCCccccccccc
Confidence                                 999999998875             457999999999998866553             


Q ss_pred             ------cCCHHHHHHHHHHHHHHHHHHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEecccee
Q psy9184         392 ------YRSPNQTYAMILQVVFSLAVAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISR  465 (562)
Q Consensus       392 ------~l~e~~i~~I~~QIl~aL~yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr  465 (562)
                            .+++.+++.++.||+.||.|||+ .||+||||||+|||++.++                    .+||+|||+|+
T Consensus       193 ~~~~~~~~~~~~~~~i~~qi~~aL~~LH~-~~ivHrDlkp~NIll~~~~--------------------~~kl~DFG~a~  251 (370)
T 2psq_A          193 NRVPEEQMTFKDLVSCTYQLARGMEYLAS-QKCIHRDLAARNVLVTENN--------------------VMKIADFGLAR  251 (370)
T ss_dssp             ---CCCCCCHHHHHHHHHHHHHHHHHHHH-TTEECSCCCGGGEEECTTC--------------------CEEECCCSSCE
T ss_pred             cccccccCCHHHHHHHHHHHHHHHHHHHh-CCeeccccchhhEEECCCC--------------------CEEEccccCCc
Confidence                  26889999999999999999999 7999999999999999886                    79999999998


Q ss_pred             eecCC-------cEEEeecCCCccccCC-CCCcHHHHHHHh
Q psy9184         466 CFVGE-------KICYYDLSQDEELFEG-EGDYQFDMYRMM  498 (562)
Q Consensus       466 ~~~~~-------g~v~~~l~~~pelF~g-~~~~q~dIy~lm  498 (562)
                      .....       ...++..|++||++.+ ..+...|||++.
T Consensus       252 ~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG  292 (370)
T 2psq_A          252 DINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFG  292 (370)
T ss_dssp             ETTCCCTTCTTTTTTSCGGGCCHHHHHTCCCCHHHHHHHHH
T ss_pred             ccCcccceecccCCCcccceECHhHhcCCCCCcHHHHHHHH
Confidence            76431       1223456899998766 456679998853

>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*

Probab=99.95  E-value=6e-28  Score=241.20  Aligned_cols=232  Identities=18%  Similarity=0.188  Sum_probs=168.3

Q ss_pred             CCCceeeeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCccccc
Q psy9184         261 SALKNCKKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTEL  334 (562)
Q Consensus       261 ~~y~~~~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~l  334 (562)
                      ++|++.+.||+|+||.||+|      ..+|+|++....        ....+.+.+|+.+++.++|               
T Consensus         9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~--------~~~~~~~~~E~~~l~~l~h---------------   65 (277)
T 3f3z_A            9 QYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYF--------VEDVDRFKQEIEIMKSLDH---------------   65 (277)
T ss_dssp             HHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGG--------CSCHHHHHHHHHHHHTCCC---------------
T ss_pred             hhEEeeeEEeecCCEEEEEEEeCCCCcEEEEEeehhhc--------cchHHHHHHHHHHHHhCCC---------------
Confidence            46899999999999999999      689999998643        1224578899999999988               


Q ss_pred             ccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc---cCCHHHHHHHHHHHHHHHHH
Q psy9184         335 LKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK---YRSPNQTYAMILQVVFSLAV  411 (562)
Q Consensus       335 ~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~---~l~e~~i~~I~~QIl~aL~y  411 (562)
                                 |||+++++++.+             .+..|+||||+.||++.+.+.   .+++.+++.++.||+.||.|
T Consensus        66 -----------~~i~~~~~~~~~-------------~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~i~~~i~~~l~~  121 (277)
T 3f3z_A           66 -----------PNIIRLYETFED-------------NTDIYLVMELCTGGELFERVVHKRVFRESDAARIMKDVLSAVAY  121 (277)
T ss_dssp             -----------TTBCCEEEEEEC-------------SSEEEEEEECCCSCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHH
T ss_pred             -----------CCEeeEEEEEec-------------CCeEEEEEeccCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHH
Confidence                       999999999875             558999999999998876653   48999999999999999999


Q ss_pred             HHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecC----CcEEEeecCCCccccCCC
Q psy9184         412 AEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVG----EKICYYDLSQDEELFEGE  487 (562)
Q Consensus       412 LH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~----~g~v~~~l~~~pelF~g~  487 (562)
                      ||+ .||+||||||+|||+..++..                 ..++|+|||+++....    ....++..|++||++.+.
T Consensus       122 lH~-~~i~H~dlkp~Nil~~~~~~~-----------------~~~~l~Dfg~~~~~~~~~~~~~~~~t~~y~aPE~~~~~  183 (277)
T 3f3z_A          122 CHK-LNVAHRDLKPENFLFLTDSPD-----------------SPLKLIDFGLAARFKPGKMMRTKVGTPYYVSPQVLEGL  183 (277)
T ss_dssp             HHH-TTEECCCCSGGGEEESSSSTT-----------------CCEEECCCTTCEECCTTSCBCCCCSCTTTCCHHHHTTC
T ss_pred             HHH-CCccCCCCCHHHEEEecCCCC-----------------CcEEEEecccceeccCccchhccCCCCCccChHHhccc
Confidence            999 799999999999999432210                 1799999999987654    233457789999999988


Q ss_pred             CCcHHHHHHHhhcccCCCCCCCCCCChhhhHHHHHHHHhhcccCCCCCCCchhHHHHHHHHHHHhcCCCcCcCC
Q psy9184         488 GDYQFDMYRMMRKQCQNNWQNFTPKNNVFWIHYLVDKATCLKKGYQYLRAPRHQAFELLEELGQNALHFDSCYE  561 (562)
Q Consensus       488 ~~~q~dIy~lm~~~~~~~W~~~~P~tn~~wl~yl~~~Ll~~~~~~~~~~~~~~~~~~~l~~l~~~~l~~~s~~~  561 (562)
                      .....|||++.-... ..+.+..|+....-. .+...+..  ..+..+.......-..+.+|...+|.++...|
T Consensus       184 ~~~~~Di~slG~~l~-~l~~g~~p~~~~~~~-~~~~~~~~--~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R  253 (277)
T 3f3z_A          184 YGPECDEWSAGVMMY-VLLCGYPPFSAPTDS-EVMLKIRE--GTFTFPEKDWLNVSPQAESLIRRLLTKSPKQR  253 (277)
T ss_dssp             BCTTHHHHHHHHHHH-HHHHSSCSSCCSSHH-HHHHHHHH--CCCCCCHHHHTTSCHHHHHHHHHHTCSSTTTS
T ss_pred             CCchhhehhHHHHHH-HHHHCCCCCCCCCHH-HHHHHHHh--CCCCCCchhhhcCCHHHHHHHHHHccCChhhC
Confidence            777899988643332 333344444322211 12222222  11111110000113467778888888887665

>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}

Probab=99.95  E-value=5.2e-28  Score=251.93  Aligned_cols=173  Identities=18%  Similarity=0.256  Sum_probs=144.3

Q ss_pred             CCCceeeeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCccccc
Q psy9184         261 SALKNCKKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTEL  334 (562)
Q Consensus       261 ~~y~~~~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~l  334 (562)
                      ++|.+.+.||+|+||.||+|      +.||+|++....     .........+.+|+.+++.++|               
T Consensus         9 ~~Y~i~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~-----~~~~~~~~~~~~E~~~l~~l~h---------------   68 (336)
T 3h4j_B            9 GPYIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQL-----LKKSDMHMRVEREISYLKLLRH---------------   68 (336)
T ss_dssp             TTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHH-----HHHTTCSHHHHHHHHHHTTCCC---------------
T ss_pred             CCEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEehHH-----ccchhHHHHHHHHHHHHHhCCC---------------
Confidence            67999999999999999999      789999998532     1111223568899999999998               


Q ss_pred             ccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc---cCCHHHHHHHHHHHHHHHHH
Q psy9184         335 LKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK---YRSPNQTYAMILQVVFSLAV  411 (562)
Q Consensus       335 ~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~---~l~e~~i~~I~~QIl~aL~y  411 (562)
                                 |||+++++++.+             .+.+|+||||+ +|++++.+.   .+++.+++.++.||+.||.|
T Consensus        69 -----------pnIv~l~~~~~~-------------~~~~~lv~E~~-~g~l~~~l~~~~~l~~~~~~~i~~qi~~aL~~  123 (336)
T 3h4j_B           69 -----------PHIIKLYDVITT-------------PTDIVMVIEYA-GGELFDYIVEKKRMTEDEGRRFFQQIICAIEY  123 (336)
T ss_dssp             -----------TTBCCEEEEEEC-------------SSEEEEEECCC-CEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHH
T ss_pred             -----------CCCCeEEEEEEe-------------CCEEEEEEECC-CCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHH
Confidence                       999999999875             55899999999 677777663   48999999999999999999


Q ss_pred             HHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecC----CcEEEeecCCCccccCCC
Q psy9184         412 AEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVG----EKICYYDLSQDEELFEGE  487 (562)
Q Consensus       412 LH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~----~g~v~~~l~~~pelF~g~  487 (562)
                      ||+ .||+||||||+|||++.++                    .+||+|||+|+....    ...+++..|++||++.+.
T Consensus       124 LH~-~givH~Dlkp~NIll~~~~--------------------~~kl~DFG~s~~~~~~~~~~~~~gt~~y~aPE~~~~~  182 (336)
T 3h4j_B          124 CHR-HKIVHRDLKPENLLLDDNL--------------------NVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVINGK  182 (336)
T ss_dssp             HHH-HTCCCCCCSTTTEEECTTC--------------------CEEECCSSCTBTTTTSBTTCCCTTSTTTSCGGGSCCS
T ss_pred             HHH-CCeEecCCchhhEEEcCCC--------------------CEEEEEeccceeccCCcccccccCCcCcCCHHHHcCC
Confidence            999 6999999999999999886                    799999999986544    233457889999999886


Q ss_pred             C--CcHHHHHHHhh
Q psy9184         488 G--DYQFDMYRMMR  499 (562)
Q Consensus       488 ~--~~q~dIy~lm~  499 (562)
                      .  ....|||++.-
T Consensus       183 ~~~~~~~DiwslG~  196 (336)
T 3h4j_B          183 LYAGPEVDVWSCGI  196 (336)
T ss_dssp             GGGCHHHHHHHHHH
T ss_pred             CCCCCccchhHHHH
Confidence            4  45689988543

>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*

Probab=99.95  E-value=3.3e-27  Score=248.60  Aligned_cols=175  Identities=14%  Similarity=0.153  Sum_probs=146.3

Q ss_pred             CCCCceeeeeecc--CceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCcc
Q psy9184         260 SSALKNCKKIGEG--VYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCF  331 (562)
Q Consensus       260 ~~~y~~~~~LG~G--sfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~f  331 (562)
                      .++|++.++||+|  +||.||+|      +.||||++....      ......+.+.+|+.+++.++|            
T Consensus        24 ~~~y~~~~~lG~G~~~~g~V~~~~~~~~~~~vavK~~~~~~------~~~~~~~~~~~E~~~l~~l~h------------   85 (389)
T 3gni_B           24 GGCYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEA------CSNEMVTFLQGELHVSKLFNH------------   85 (389)
T ss_dssp             GGGEEEEEEEEEETTTTEEEEEEEETTTCCEEEEEEEEGGG------SCHHHHHHHHHHHHHHHHCCC------------
T ss_pred             CCcEEEEecccCCcCCceEEEEEEEcCCCCEEEEEEecccc------cChHHHHHHHHHHHHHHhCCC------------
Confidence            3789999999999  99999999      789999998753      224455778899999999998            


Q ss_pred             cccccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCcccc-----ccCCHHHHHHHHHHHH
Q psy9184         332 TELLKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDI-----KYRSPNQTYAMILQVV  406 (562)
Q Consensus       332 v~l~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l-----~~l~e~~i~~I~~QIl  406 (562)
                                    |||++++++|.+             ++.+|+|||||.+|++.+.+     ..+++..++.++.||+
T Consensus        86 --------------~niv~~~~~~~~-------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~  138 (389)
T 3gni_B           86 --------------PNIVPYRATFIA-------------DNELWVVTSFMAYGSAKDLICTHFMDGMNELAIAYILQGVL  138 (389)
T ss_dssp             --------------TTBCCEEEEEEE-------------TTEEEEEEECCTTCBHHHHHHHTCTTCCCHHHHHHHHHHHH
T ss_pred             --------------CCCCcEeEEEEE-------------CCEEEEEEEccCCCCHHHHHhhhcccCCCHHHHHHHHHHHH
Confidence                          999999999976             55899999999999887665     3489999999999999


Q ss_pred             HHHHHHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecCCc------------EEE
Q psy9184         407 FSLAVAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVGEK------------ICY  474 (562)
Q Consensus       407 ~aL~yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~~g------------~v~  474 (562)
                      .||.|||+ .||+||||||+|||++.++                    .+||+|||++......+            .++
T Consensus       139 ~~l~~LH~-~~ivHrDlkp~NIll~~~~--------------------~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~g  197 (389)
T 3gni_B          139 KALDYIHH-MGYVHRSVKASHILISVDG--------------------KVYLSGLRSNLSMISHGQRQRVVHDFPKYSVK  197 (389)
T ss_dssp             HHHHHHHH-TTEECCCCSGGGEEECTTC--------------------CEEECCGGGCEECEETTEECSCBCCCCTTCTT
T ss_pred             HHHHHHHh-CCeecCCCCHHHEEEcCCC--------------------CEEEcccccceeeccccccccccccccccccc
Confidence            99999999 7999999999999999886                    79999999987654322            133


Q ss_pred             eecCCCccccCC---CCCcHHHHHHHhhc
Q psy9184         475 YDLSQDEELFEG---EGDYQFDMYRMMRK  500 (562)
Q Consensus       475 ~~l~~~pelF~g---~~~~q~dIy~lm~~  500 (562)
                      +..|++||++.+   ..+...|||++.-.
T Consensus       198 t~~y~aPE~~~~~~~~~~~~~DiwslG~i  226 (389)
T 3gni_B          198 VLPWLSPEVLQQNLQGYDAKSDIYSVGIT  226 (389)
T ss_dssp             TGGGSCHHHHSTTSSCBCTHHHHHHHHHH
T ss_pred             cccccCHHHHhccCCCCCcHhHHHHHHHH
Confidence            455899999877   34566999886433

>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...

Probab=99.95  E-value=1.4e-26  Score=236.97  Aligned_cols=174  Identities=17%  Similarity=0.259  Sum_probs=146.2

Q ss_pred             CCCCceeeeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCcccc
Q psy9184         260 SSALKNCKKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTE  333 (562)
Q Consensus       260 ~~~y~~~~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~  333 (562)
                      .++|++.+.||+|+||.||+|      +.||||++....           .+.+.+|+.+++.+.+              
T Consensus        35 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-----------~~~~~~E~~~l~~l~~--------------   89 (330)
T 3nsz_A           35 QDDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVK-----------KKKIKREIKILENLRG--------------   89 (330)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSCC-----------HHHHHHHHHHHHHHTT--------------
T ss_pred             CCceEEEEEecccCCeEEEEEEECCCCcEEEEEEecccc-----------hHHHHHHHHHHHHcCC--------------
Confidence            367999999999999999999      799999997432           2467899999999984              


Q ss_pred             cccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccccCCHHHHHHHHHHHHHHHHHHH
Q psy9184         334 LLKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIKYRSPNQTYAMILQVVFSLAVAE  413 (562)
Q Consensus       334 l~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~~l~e~~i~~I~~QIl~aL~yLH  413 (562)
                                 ||||+++++++.+..           ....++||||+.+|++...+..+++.+++.++.||+.||.|||
T Consensus        90 -----------~~~i~~~~~~~~~~~-----------~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH  147 (330)
T 3nsz_A           90 -----------GPNIITLADIVKDPV-----------SRTPALVFEHVNNTDFKQLYQTLTDYDIRFYMYEILKALDYCH  147 (330)
T ss_dssp             -----------STTBCCEEEEEECTT-----------TCCEEEEEECCCCCCHHHHGGGCCHHHHHHHHHHHHHHHHHHH
T ss_pred             -----------CCCEEEeeeeeccCC-----------CCceEEEEeccCchhHHHHHHhCCHHHHHHHHHHHHHHHHHHH
Confidence                       499999999887522           4578999999999987777778999999999999999999999


Q ss_pred             hhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecC----CcEEEeecCCCccccCC--C
Q psy9184         414 VELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVG----EKICYYDLSQDEELFEG--E  487 (562)
Q Consensus       414 ~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~----~g~v~~~l~~~pelF~g--~  487 (562)
                      + .||+||||||+|||++.++.                   .+||+|||+|+....    ....++..|++||++.+  .
T Consensus       148 ~-~~ivH~Dikp~Nil~~~~~~-------------------~~kl~Dfg~a~~~~~~~~~~~~~~~~~y~aPE~~~~~~~  207 (330)
T 3nsz_A          148 S-MGIMHRDVKPHNVMIDHEHR-------------------KLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQM  207 (330)
T ss_dssp             H-TTEECCCCSGGGEEEETTTT-------------------EEEECCCTTCEECCTTCCCCSCCSCGGGCCHHHHTTCCC
T ss_pred             h-CCeeeCCCCHHHEEEcCCCC-------------------EEEEEeCCCceEcCCCCccccccccccccChhhhcCCCc
Confidence            9 79999999999999987753                   799999999987654    23345677899998876  3


Q ss_pred             CCcHHHHHHHhhc
Q psy9184         488 GDYQFDMYRMMRK  500 (562)
Q Consensus       488 ~~~q~dIy~lm~~  500 (562)
                      .+...|||++.-.
T Consensus       208 ~~~~~DiwslG~i  220 (330)
T 3nsz_A          208 YDYSLDMWSLGCM  220 (330)
T ss_dssp             CCTHHHHHHHHHH
T ss_pred             CCchhhHHHHHHH
Confidence            5667999886443

>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}

Probab=99.95  E-value=7.9e-28  Score=250.83  Aligned_cols=231  Identities=18%  Similarity=0.188  Sum_probs=159.3

Q ss_pred             CCCceeeeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCccccc
Q psy9184         261 SALKNCKKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTEL  334 (562)
Q Consensus       261 ~~y~~~~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~l  334 (562)
                      ++|++.+.||+|+||.||+|      +.||||++....          ..+.+.+|+.+++.++|               
T Consensus        53 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~----------~~~~~~~E~~~l~~l~h---------------  107 (349)
T 2w4o_A           53 DFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTV----------DKKIVRTEIGVLLRLSH---------------  107 (349)
T ss_dssp             GTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEC--------------------CHHHHHCCC---------------
T ss_pred             CcEEEeeEEeeCCCEEEEEEEECCCCcEEEEEEeccch----------hHHHHHHHHHHHHhCCC---------------
Confidence            56899999999999999999      679999998542          12457789999999998               


Q ss_pred             ccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc---cCCHHHHHHHHHHHHHHHHH
Q psy9184         335 LKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK---YRSPNQTYAMILQVVFSLAV  411 (562)
Q Consensus       335 ~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~---~l~e~~i~~I~~QIl~aL~y  411 (562)
                                 |||++++++|..             .+.+|+||||+.||++.+.+.   .+++.+++.++.||+.||.|
T Consensus       108 -----------~niv~~~~~~~~-------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~L~~  163 (349)
T 2w4o_A          108 -----------PNIIKLKEIFET-------------PTEISLVLELVTGGELFDRIVEKGYYSERDAADAVKQILEAVAY  163 (349)
T ss_dssp             -----------TTBCCEEEEEEC-------------SSEEEEEECCCCSCBHHHHHTTCSSCCHHHHHHHHHHHHHHHHH
T ss_pred             -----------CCCcceeeeEec-------------CCeEEEEEEeCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHH
Confidence                       999999999875             558999999999998877664   38999999999999999999


Q ss_pred             HHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecC----CcEEEeecCCCccccCC-
Q psy9184         412 AEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVG----EKICYYDLSQDEELFEG-  486 (562)
Q Consensus       412 LH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~----~g~v~~~l~~~pelF~g-  486 (562)
                      ||+ .||+||||||+|||++..+..                 ..+||+|||+++....    ....++..|++||++.+ 
T Consensus       164 LH~-~~ivH~Dikp~NIll~~~~~~-----------------~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~  225 (349)
T 2w4o_A          164 LHE-NGIVHRDLKPENLLYATPAPD-----------------APLKIADFGLSKIVEHQVLMKTVCGTPGYCAPEILRGC  225 (349)
T ss_dssp             HHH-TTCCCCCCCGGGEEESSSSTT-----------------CCEEECCCC----------------CGGGSCHHHHTTC
T ss_pred             HHH-CCeEecCCCcccEEEecCCCC-----------------CCEEEccCccccccCcccccccccCCCCccCHHHhcCC
Confidence            999 799999999999999862210                 1799999999987654    23456788999999887 


Q ss_pred             CCCcHHHHHHHhhcccCCCCCCCCCCChhhhHHHHHHHHhhcccCCCCCCCchhHHHHHHHHHHHhcCCCcCcCC
Q psy9184         487 EGDYQFDMYRMMRKQCQNNWQNFTPKNNVFWIHYLVDKATCLKKGYQYLRAPRHQAFELLEELGQNALHFDSCYE  561 (562)
Q Consensus       487 ~~~~q~dIy~lm~~~~~~~W~~~~P~tn~~wl~yl~~~Ll~~~~~~~~~~~~~~~~~~~l~~l~~~~l~~~s~~~  561 (562)
                      ..+...|||++.-... ..+.+..|+.....-..+...++.....+..+  .....-..+.+|.+.||.++...|
T Consensus       226 ~~~~~~DiwslG~il~-ell~g~~pf~~~~~~~~~~~~i~~~~~~~~~~--~~~~~~~~~~~li~~~L~~dP~~R  297 (349)
T 2w4o_A          226 AYGPEVDMWSVGIITY-ILLCGFEPFYDERGDQFMFRRILNCEYYFISP--WWDEVSLNAKDLVRKLIVLDPKKR  297 (349)
T ss_dssp             CCCTHHHHHHHHHHHH-HHHHSSCTTCCTTCHHHHHHHHHTTCCCCCTT--TTTTSCHHHHHHHHTTSCSSGGGS
T ss_pred             CCCcccchHHHHHHHH-HHHhCCCCCCCCcccHHHHHHHHhCCCccCCc--hhhhCCHHHHHHHHHHccCChhhC
Confidence            4566799988644332 33344455533322233344444412222211  111123467888999999887765

>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A

Probab=99.95  E-value=2.7e-28  Score=254.17  Aligned_cols=231  Identities=19%  Similarity=0.224  Sum_probs=165.7

Q ss_pred             CCCceeeeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCccccc
Q psy9184         261 SALKNCKKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTEL  334 (562)
Q Consensus       261 ~~y~~~~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~l  334 (562)
                      ++|++.+.||+|+||.||+|      +.||||++.....            ...+|+.++.++.+               
T Consensus        22 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~------------~~~~E~~~l~~~~~---------------   74 (342)
T 2qr7_A           22 DGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKR------------DPTEEIEILLRYGQ---------------   74 (342)
T ss_dssp             HHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTTC------------CCHHHHHHHHHHTT---------------
T ss_pred             ccEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEcccC------------ChHHHHHHHHHhcC---------------
Confidence            56899999999999999999      7899999986531            23468888888853               


Q ss_pred             ccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc---cCCHHHHHHHHHHHHHHHHH
Q psy9184         335 LKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK---YRSPNQTYAMILQVVFSLAV  411 (562)
Q Consensus       335 ~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~---~l~e~~i~~I~~QIl~aL~y  411 (562)
                                ||||++++++|.+             ++.+|+|||||.||++++.+.   .+++.+++.++.||+.||.|
T Consensus        75 ----------hp~iv~~~~~~~~-------------~~~~~lv~E~~~gg~L~~~i~~~~~~~~~~~~~~~~qi~~al~~  131 (342)
T 2qr7_A           75 ----------HPNIITLKDVYDD-------------GKYVYVVTELMKGGELLDKILRQKFFSEREASAVLFTITKTVEY  131 (342)
T ss_dssp             ----------STTBCCEEEEEEC-------------SSEEEEEECCCCSCBHHHHHHTCTTCCHHHHHHHHHHHHHHHHH
T ss_pred             ----------CCCcCeEEEEEEc-------------CCEEEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHH
Confidence                      4999999999975             568999999999999887764   38999999999999999999


Q ss_pred             HHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecCC-----cEEEeecCCCccccCC
Q psy9184         412 AEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVGE-----KICYYDLSQDEELFEG  486 (562)
Q Consensus       412 LH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~~-----g~v~~~l~~~pelF~g  486 (562)
                      ||+ .||+||||||+|||+...+..                ...+||+|||+|+.....     ...++..|++||++.+
T Consensus       132 lH~-~givHrDlkp~NIl~~~~~~~----------------~~~~kl~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~  194 (342)
T 2qr7_A          132 LHA-QGVVHRDLKPSNILYVDESGN----------------PESIRICDFGFAKQLRAENGLLMTPCYTANFVAPEVLER  194 (342)
T ss_dssp             HHH-TTEECSCCCGGGEEESSSSCS----------------GGGEEECCCTTCEECBCTTCCBCCSSCCSSCCCHHHHHH
T ss_pred             HHH-CCcEeccCCHHHEEEecCCCC----------------cCeEEEEECCCcccCcCCCCceeccCCCccccCHHHhcC
Confidence            999 799999999999999655311                125999999999976542     2345778999999876


Q ss_pred             C-CCcHHHHHHHhhcccCCCCCCCCCCChh--hhHHHHHHHHhhcccCCCCCCCchhHHHHHHHHHHHhcCCCcCcCC
Q psy9184         487 E-GDYQFDMYRMMRKQCQNNWQNFTPKNNV--FWIHYLVDKATCLKKGYQYLRAPRHQAFELLEELGQNALHFDSCYE  561 (562)
Q Consensus       487 ~-~~~q~dIy~lm~~~~~~~W~~~~P~tn~--~wl~yl~~~Ll~~~~~~~~~~~~~~~~~~~l~~l~~~~l~~~s~~~  561 (562)
                      . .+...|||++.-. ....+.+..|+...  .....+...+......+....  ....-..+.+|.+.||..+...|
T Consensus       195 ~~~~~~~DiwslG~i-l~ell~g~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~--~~~~s~~~~~li~~~L~~dP~~R  269 (342)
T 2qr7_A          195 QGYDAACDIWSLGVL-LYTMLTGYTPFANGPDDTPEEILARIGSGKFSLSGGY--WNSVSDTAKDLVSKMLHVDPHQR  269 (342)
T ss_dssp             HHHHHHHHHHHHHHH-HHHHHHSSCSSCSSTTSCHHHHHHHHHHCCCCCCSTT--TTTSCHHHHHHHHHHTCSSTTTS
T ss_pred             CCCCCccCeeeHhHH-HHHHhcCCCCCCCCCcCCHHHHHHHHccCCcccCccc--cccCCHHHHHHHHHHCCCChhHC
Confidence            4 4556899886433 32333444444321  112233333333112222111  11123467778888888887765

>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B

Probab=99.95  E-value=8.1e-28  Score=266.14  Aligned_cols=230  Identities=17%  Similarity=0.139  Sum_probs=174.3

Q ss_pred             CCCCceeeeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCcccc
Q psy9184         260 SSALKNCKKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTE  333 (562)
Q Consensus       260 ~~~y~~~~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~  333 (562)
                      .++|.+.+.||+|+||.||+|      +.||||++....     .........+.+|+.+++.++|              
T Consensus       184 ~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~l~k~~-----~~~~~~~~~~~~E~~iL~~l~h--------------  244 (543)
T 3c4z_A          184 EDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKR-----LKKRKGYQGAMVEKKILAKVHS--------------  244 (543)
T ss_dssp             GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEHHH-----HHHTTCHHHHHHHHHHHHHCCC--------------
T ss_pred             hhheEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEEhHH-----hhhhHHHHHHHHHHHHHHhcCC--------------
Confidence            467999999999999999999      789999998642     1122345678899999999988              


Q ss_pred             cccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc-------cCCHHHHHHHHHHHH
Q psy9184         334 LLKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK-------YRSPNQTYAMILQVV  406 (562)
Q Consensus       334 l~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~-------~l~e~~i~~I~~QIl  406 (562)
                                  |||++++++|.+             ...+|+||||++||++...+.       .+++..++.++.||+
T Consensus       245 ------------p~Iv~l~~~~~~-------------~~~l~lVmE~~~gg~L~~~l~~~~~~~~~l~e~~~~~~~~qi~  299 (543)
T 3c4z_A          245 ------------RFIVSLAYAFET-------------KTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIV  299 (543)
T ss_dssp             ------------TTBCCEEEEEEC-------------SSEEEEEECCCTTCBHHHHHHTSSTTSCSCCHHHHHHHHHHHH
T ss_pred             ------------CCEeeEEEEEee-------------CCEEEEEEEeccCCCHHHHHHHhhcccccccHHHHHHHHHHHH
Confidence                        999999999875             558999999999998866552       388999999999999


Q ss_pred             HHHHHHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecC-----CcEEEeecCCCc
Q psy9184         407 FSLAVAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVG-----EKICYYDLSQDE  481 (562)
Q Consensus       407 ~aL~yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~-----~g~v~~~l~~~p  481 (562)
                      .||.|||+ .||+||||||+|||++.++                    .+||+|||+|+....     .+.+++..|++|
T Consensus       300 ~aL~~LH~-~gIvHrDLKP~NILl~~~g--------------------~vkL~DFGla~~~~~~~~~~~~~~GT~~Y~AP  358 (543)
T 3c4z_A          300 SGLEHLHQ-RNIIYRDLKPENVLLDDDG--------------------NVRISDLGLAVELKAGQTKTKGYAGTPGFMAP  358 (543)
T ss_dssp             HHHHHHHH-TTEECCCCCGGGEEECTTS--------------------CEEECCCTTCEECCTTCCCBCCCCSCTTTSCH
T ss_pred             HHHHHHHH-cCCcccCCChHHEEEeCCC--------------------CEEEeecceeeeccCCCcccccccCCccccCh
Confidence            99999999 7999999999999999887                    799999999987654     223668889999


Q ss_pred             cccCCC-CCcHHHHHHHhhcccCCCCCCCCCCChh---hhHHHHHHHHhhcccCCCCCCCchhHHHHHHHHHHHhcCCCc
Q psy9184         482 ELFEGE-GDYQFDMYRMMRKQCQNNWQNFTPKNNV---FWIHYLVDKATCLKKGYQYLRAPRHQAFELLEELGQNALHFD  557 (562)
Q Consensus       482 elF~g~-~~~q~dIy~lm~~~~~~~W~~~~P~tn~---~wl~yl~~~Ll~~~~~~~~~~~~~~~~~~~l~~l~~~~l~~~  557 (562)
                      |++.+. .+...|+|++. ..+.....+..|+...   .....+....+.....++..-      -..+..|.+.+|+.+
T Consensus       359 E~l~~~~~~~~~DiwSlG-vilyelltG~~PF~~~~~~~~~~~~~~~i~~~~~~~p~~~------s~~~~~li~~lL~~d  431 (543)
T 3c4z_A          359 ELLLGEEYDFSVDYFALG-VTLYEMIAARGPFRARGEKVENKELKQRVLEQAVTYPDKF------SPASKDFCEALLQKD  431 (543)
T ss_dssp             HHHTTCCBCTHHHHHHHH-HHHHHHHHSSCSSCCTTCCCCHHHHHHHHHHCCCCCCTTS------CHHHHHHHHHHSCSS
T ss_pred             hhhcCCCCChHHhcCcch-HHHHHHHhCCCCCCCCccchhHHHHHHHHhhcccCCCccc------CHHHHHHHHHhccCC
Confidence            998874 56679998853 3333344444454321   112333444444233343222      236677788888887


Q ss_pred             CcCC
Q psy9184         558 SCYE  561 (562)
Q Consensus       558 s~~~  561 (562)
                      ...|
T Consensus       432 P~~R  435 (543)
T 3c4z_A          432 PEKR  435 (543)
T ss_dssp             GGGS
T ss_pred             HhHC
Confidence            7655

>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...

Probab=99.95  E-value=1.1e-27  Score=241.64  Aligned_cols=177  Identities=18%  Similarity=0.236  Sum_probs=139.1

Q ss_pred             CCCCCCceeeeeeccCceEEEEE---eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCccccc
Q psy9184         258 YPSSALKNCKKIGEGVYGEVFKL---NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTEL  334 (562)
Q Consensus       258 ~~~~~y~~~~~LG~GsfG~Vyka---~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~l  334 (562)
                      +..++|++.++||+|+||.||+|   ..+|+|++....      ......+.+.+|+.+++.++|               
T Consensus        21 i~~~~y~~~~~lG~G~~g~Vy~~~~~~~vavK~~~~~~------~~~~~~~~~~~E~~~l~~l~h---------------   79 (289)
T 3og7_A           21 IPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTA------PTPQQLQAFKNEVGVLRKTRH---------------   79 (289)
T ss_dssp             CCTTSCEEEEEEEECSSEEEEEEESSSEEEEEEESCSS------CCHHHHHHHHHHHHHHTTCCC---------------
T ss_pred             cCccceeeeeEecCCCCeEEEEEEEcCceEEEEEeccC------CCHHHHHHHHHHHHHHHhCCC---------------
Confidence            35688999999999999999999   789999998653      234455788999999999998               


Q ss_pred             ccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc----cCCHHHHHHHHHHHHHHHH
Q psy9184         335 LKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK----YRSPNQTYAMILQVVFSLA  410 (562)
Q Consensus       335 ~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~----~l~e~~i~~I~~QIl~aL~  410 (562)
                                 |||++++++..              ....++||||+.||++.+.+.    .+++.+++.++.||+.||.
T Consensus        80 -----------~~iv~~~~~~~--------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~  134 (289)
T 3og7_A           80 -----------VNILLFMGYST--------------APQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMD  134 (289)
T ss_dssp             -----------TTBCCEEEEEC--------------SSSCEEEEECCCEEEHHHHHTTC---CCHHHHHHHHHHHHHHHH
T ss_pred             -----------CcEEEEEeecc--------------CCccEEEEEecCCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHH
Confidence                       99999988543              346899999999998766663    3889999999999999999


Q ss_pred             HHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecC-------CcEEEeecCCCccc
Q psy9184         411 VAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVG-------EKICYYDLSQDEEL  483 (562)
Q Consensus       411 yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~-------~g~v~~~l~~~pel  483 (562)
                      |||+ .||+||||||+|||++.++                    .++|+|||+++....       ....++..|++||+
T Consensus       135 ~lH~-~~i~H~Dlkp~Nil~~~~~--------------------~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~  193 (289)
T 3og7_A          135 YLHA-KSIIHRDLKSNNIFLHEDN--------------------TVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEV  193 (289)
T ss_dssp             HHHH-TTCCCSCCCGGGEEEETTT--------------------EEEECCCC------------------CCCTTCCHHH
T ss_pred             HHHh-CCcccccCccceEEECCCC--------------------CEEEccceeccccccccccccccccCCCccccCchh
Confidence            9999 7999999999999999886                    799999999986543       22345788999998


Q ss_pred             cCC----CCCcHHHHHHHhhcc
Q psy9184         484 FEG----EGDYQFDMYRMMRKQ  501 (562)
Q Consensus       484 F~g----~~~~q~dIy~lm~~~  501 (562)
                      +.+    ..+...|||++.-..
T Consensus       194 ~~~~~~~~~~~~~Di~slG~il  215 (289)
T 3og7_A          194 IRMQDSNPYSFQSDVYAFGIVL  215 (289)
T ss_dssp             HC----CCSCHHHHHHHHHHHH
T ss_pred             hcccCCCCCCcccchHHHHHHH
Confidence            862    345568998864433

>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}

Probab=99.95  E-value=1.2e-27  Score=247.90  Aligned_cols=230  Identities=16%  Similarity=0.167  Sum_probs=161.5

Q ss_pred             CCCCceeeeeeccCceEEEEE-----eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCccccc
Q psy9184         260 SSALKNCKKIGEGVYGEVFKL-----NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTEL  334 (562)
Q Consensus       260 ~~~y~~~~~LG~GsfG~Vyka-----~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~l  334 (562)
                      ..+|++.+.||+|+||.||+|     +.||||++....      ......+.+.+|+.+++.+.|.              
T Consensus         8 ~~~y~i~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~------~~~~~~~~~~~E~~~l~~l~~~--------------   67 (343)
T 3dbq_A            8 GRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEE------ADNQTLDSYRNEIAYLNKLQQH--------------   67 (343)
T ss_dssp             SCEEEEEEEESCCSSEEEEEEECTTSCEEEEEEEECTT------CCHHHHHHHHHHHHHHHHHTTT--------------
T ss_pred             cCEEEEEEEEecCCCeEEEEEEeCCCCEEEEEEeeccc------cchHHHHHHHHHHHHHHhhhhc--------------
Confidence            467999999999999999999     789999998653      2344557889999999999871              


Q ss_pred             ccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc---cCCHHHHHHHHHHHHHHHHH
Q psy9184         335 LKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK---YRSPNQTYAMILQVVFSLAV  411 (562)
Q Consensus       335 ~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~---~l~e~~i~~I~~QIl~aL~y  411 (562)
                                ||||+++++++.+             ++.+|+|||+ .+|++.+.+.   .+++.+++.++.||+.||.|
T Consensus        68 ----------~~~iv~~~~~~~~-------------~~~~~lv~e~-~~~~L~~~l~~~~~~~~~~~~~i~~qi~~al~~  123 (343)
T 3dbq_A           68 ----------SDKIIRLYDYEIT-------------DQYIYMVMEC-GNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHT  123 (343)
T ss_dssp             ----------CTTBCCEEEEEEC-------------SSEEEEEECC-CSEEHHHHHHHSCCCCHHHHHHHHHHHHHHHHH
T ss_pred             ----------CCceEEEeeeEee-------------CCEEEEEEeC-CCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHH
Confidence                      3899999998875             5589999994 5676666553   48999999999999999999


Q ss_pred             HHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecC-------CcEEEeecCCCcccc
Q psy9184         412 AEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVG-------EKICYYDLSQDEELF  484 (562)
Q Consensus       412 LH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~-------~g~v~~~l~~~pelF  484 (562)
                      ||+ .||+||||||+|||++..                     .+||+|||+|+....       ...+++..|++||++
T Consensus       124 lH~-~~iiHrDikp~NIll~~~---------------------~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~  181 (343)
T 3dbq_A          124 IHQ-HGIVHSDLKPANFLIVDG---------------------MLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAI  181 (343)
T ss_dssp             HHH-TTCCCCCCCGGGEEEETT---------------------EEEECCCSSSCCC------------CCCCSSCCHHHH
T ss_pred             HHh-CCeecCCCCcceEEEECC---------------------cEEEeecccccccCcccccccCCCCcCCcCcCCHHHH
Confidence            999 799999999999999743                     799999999987643       234568889999998


Q ss_pred             CC------------CCCcHHHHHHHhhcccCCCCCCCCCCChhhh-HHHHHHHHhhcccCCCCCCCchhHHHHHHHHHHH
Q psy9184         485 EG------------EGDYQFDMYRMMRKQCQNNWQNFTPKNNVFW-IHYLVDKATCLKKGYQYLRAPRHQAFELLEELGQ  551 (562)
Q Consensus       485 ~g------------~~~~q~dIy~lm~~~~~~~W~~~~P~tn~~w-l~yl~~~Ll~~~~~~~~~~~~~~~~~~~l~~l~~  551 (562)
                      .+            ..+...|||++.-... ..+.+..|+..... +..+ ..++........+...    -..+.+|..
T Consensus       182 ~~~~~~~~~~~~~~~~~~~~DiwslG~il~-ell~g~~pf~~~~~~~~~~-~~~~~~~~~~~~~~~~----~~~l~~li~  255 (343)
T 3dbq_A          182 KDMSSSRENGKSKSKISPKSDVWSLGCILY-YMTYGKTPFQQIINQISKL-HAIIDPNHEIEFPDIP----EKDLQDVLK  255 (343)
T ss_dssp             HHCC-----------CCHHHHHHHHHHHHH-HHHHSSCTTTTCCSHHHHH-HHHHCTTSCCCCCCCS----CHHHHHHHH
T ss_pred             hhccccccccccccCCCchhhHHHHHHHHH-HHHhCCCcchhhhhHHHHH-HHHhcCCcccCCcccC----CHHHHHHHH
Confidence            53            3455689988644332 22333444432111 1111 1222211111111111    135666777


Q ss_pred             hcCCCcCcCC
Q psy9184         552 NALHFDSCYE  561 (562)
Q Consensus       552 ~~l~~~s~~~  561 (562)
                      .+|.++...|
T Consensus       256 ~~L~~dp~~R  265 (343)
T 3dbq_A          256 CCLKRDPKQR  265 (343)
T ss_dssp             HHTCSSTTTS
T ss_pred             HHcCCChhHC
Confidence            7777776655

>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}

Probab=99.95  E-value=4.1e-27  Score=240.74  Aligned_cols=225  Identities=16%  Similarity=0.114  Sum_probs=161.2

Q ss_pred             CCCceeeeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCccccc
Q psy9184         261 SALKNCKKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTEL  334 (562)
Q Consensus       261 ~~y~~~~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~l  334 (562)
                      ++|++.++||+|+||+||+|      +.||||++....      ...........|+..+..+.+               
T Consensus        57 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~vavK~~~~~~------~~~~~~~~~~~e~~~~~~~~~---------------  115 (311)
T 3p1a_A           57 QSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPF------RGPKDRARKLAEVGSHEKVGQ---------------  115 (311)
T ss_dssp             HHEEEEEEEEEETTEEEEEEEETTTSCEEEEEEESSSC------CSHHHHHHHHHHHHHHHHHCC---------------
T ss_pred             hheeeeheeccCCCeEEEEEEECCCCeEEEEEEecccc------cChHHHHHHHHHHHHHHHhcC---------------
Confidence            45899999999999999999      789999987543      122333455667776666633               


Q ss_pred             ccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc----cCCHHHHHHHHHHHHHHHH
Q psy9184         335 LKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK----YRSPNQTYAMILQVVFSLA  410 (562)
Q Consensus       335 ~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~----~l~e~~i~~I~~QIl~aL~  410 (562)
                                ||||++++++|.+             ++.+|+||||+ +|++.+.+.    .+++..++.++.||+.||.
T Consensus       116 ----------h~~iv~l~~~~~~-------------~~~~~lv~e~~-~~~L~~~~~~~~~~l~~~~~~~i~~qi~~aL~  171 (311)
T 3p1a_A          116 ----------HPCCVRLEQAWEE-------------GGILYLQTELC-GPSLQQHCEAWGASLPEAQVWGYLRDTLLALA  171 (311)
T ss_dssp             ----------CTTBCCEEEEEEE-------------TTEEEEEEECC-CCBHHHHHHHHCSCCCHHHHHHHHHHHHHHHH
T ss_pred             ----------CCcEEEEEEEEEe-------------CCEEEEEEecc-CCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHH
Confidence                      3999999999875             56899999999 466665553    3899999999999999999


Q ss_pred             HHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecCC----cEEEeecCCCccccCC
Q psy9184         411 VAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVGE----KICYYDLSQDEELFEG  486 (562)
Q Consensus       411 yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~~----g~v~~~l~~~pelF~g  486 (562)
                      |||+ .+|+||||||+|||++.++                    .+||+|||+++.....    ...++..|++||++.+
T Consensus       172 ~LH~-~~ivH~Dikp~NIll~~~~--------------------~~kl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~  230 (311)
T 3p1a_A          172 HLHS-QGLVHLDVKPANIFLGPRG--------------------RCKLGDFGLLVELGTAGAGEVQEGDPRYMAPELLQG  230 (311)
T ss_dssp             HHHH-TTEECCCCSGGGEEECGGG--------------------CEEECCCTTCEECC------CCCCCGGGCCGGGGGT
T ss_pred             HHHH-CCEecCCCCHHHEEECCCC--------------------CEEEccceeeeecccCCCCcccCCCccccCHhHhcC
Confidence            9999 7999999999999998876                    7999999999876542    2335778999999999


Q ss_pred             CCCcHHHHHHHhhcccCCCCCC-CCCCChhhhHHHHHHHHhhcccCCCCCCCchhHHHHHHHHHHHhcCCCcCcCC
Q psy9184         487 EGDYQFDMYRMMRKQCQNNWQN-FTPKNNVFWIHYLVDKATCLKKGYQYLRAPRHQAFELLEELGQNALHFDSCYE  561 (562)
Q Consensus       487 ~~~~q~dIy~lm~~~~~~~W~~-~~P~tn~~wl~yl~~~Ll~~~~~~~~~~~~~~~~~~~l~~l~~~~l~~~s~~~  561 (562)
                      ..+...|||++.-... ....+ ..|+....|     ..+.. . .++.  .-....-..+.+|...+|.++...|
T Consensus       231 ~~~~~~DiwslG~il~-el~~g~~~~~~~~~~-----~~~~~-~-~~~~--~~~~~~~~~l~~li~~~L~~dP~~R  296 (311)
T 3p1a_A          231 SYGTAADVFSLGLTIL-EVACNMELPHGGEGW-----QQLRQ-G-YLPP--EFTAGLSSELRSVLVMMLEPDPKLR  296 (311)
T ss_dssp             CCSTHHHHHHHHHHHH-HHHHTCCCCSSHHHH-----HHHTT-T-CCCH--HHHTTSCHHHHHHHHHHSCSSTTTS
T ss_pred             CCCchhhHHHHHHHHH-HHHhCCCCCCCccHH-----HHHhc-c-CCCc--ccccCCCHHHHHHHHHHcCCChhhC
Confidence            8888899998654433 22222 222222221     11222 1 0000  0000113567788888888887765

>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...

Probab=99.95  E-value=9.7e-28  Score=242.16  Aligned_cols=175  Identities=18%  Similarity=0.189  Sum_probs=140.5

Q ss_pred             CCCCCceeeeeeccCceEEEEE----------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCC
Q psy9184         259 PSSALKNCKKIGEGVYGEVFKL----------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENST  328 (562)
Q Consensus       259 ~~~~y~~~~~LG~GsfG~Vyka----------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~  328 (562)
                      ...+|++.++||+|+||.||+|          +.||||++....        ....+.+.+|+.+++.++|         
T Consensus         8 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~--------~~~~~~~~~E~~~l~~l~h---------   70 (295)
T 3ugc_A            8 EERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHST--------EEHLRDFEREIEILKSLQH---------   70 (295)
T ss_dssp             CGGGEEEEEEEEECSSEEEEEEEECTTCSSCCEEEEEEEESCCC--------HHHHHHHHHHHHHHHTCCC---------
T ss_pred             CHHHhhhhheeeccCCEEEEEEEEecccCCCCcEEEEEEcccCC--------HHHHHHHHHHHHHHHhCCC---------
Confidence            3467999999999999999998          689999997542        4445678999999999998         


Q ss_pred             CcccccccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc----cCCHHHHHHHHHH
Q psy9184         329 PCFTELLKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK----YRSPNQTYAMILQ  404 (562)
Q Consensus       329 p~fv~l~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~----~l~e~~i~~I~~Q  404 (562)
                                       |||+++++++....           ...+|+||||+.+|++.+.+.    .+++.+++.++.|
T Consensus        71 -----------------~~iv~~~~~~~~~~-----------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~q  122 (295)
T 3ugc_A           71 -----------------DNIVKYKGVCYSAG-----------RRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQ  122 (295)
T ss_dssp             -----------------TTBCCEEEEECHHH-----------HTSCEEEEECCTTCBHHHHHHHCGGGCCHHHHHHHHHH
T ss_pred             -----------------CCEeeEEEEEecCC-----------CCceEEEEEeCCCCCHHHHHHhcccccCHHHHHHHHHH
Confidence                             99999998875422           346899999999998877664    3899999999999


Q ss_pred             HHHHHHHHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecCCcE--------EEee
Q psy9184         405 VVFSLAVAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVGEKI--------CYYD  476 (562)
Q Consensus       405 Il~aL~yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~~g~--------v~~~  476 (562)
                      |+.||.|||+ .||+||||||+|||++.++                    .+||+|||+|+.......        ..+.
T Consensus       123 i~~~l~~lH~-~~ivH~Dikp~Nil~~~~~--------------------~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~  181 (295)
T 3ugc_A          123 ICKGMEYLGT-KRYIHRDLATRNILVENEN--------------------RVKIGDFGLTKVLPQDKEFFKVKEPGESPI  181 (295)
T ss_dssp             HHHHHHHHHH-TTCCCSCCSGGGEEEEETT--------------------EEEECCCCSCC-------------CTTCGG
T ss_pred             HHHHHHHHhc-CCcccCCCCHhhEEEcCCC--------------------eEEEccCcccccccCCcceeeeccCCCCcc
Confidence            9999999999 7999999999999999886                    799999999987654211        1233


Q ss_pred             cCCCccccCC-CCCcHHHHHHHhh
Q psy9184         477 LSQDEELFEG-EGDYQFDMYRMMR  499 (562)
Q Consensus       477 l~~~pelF~g-~~~~q~dIy~lm~  499 (562)
                      .|++||.+.+ ..+...|||++.-
T Consensus       182 ~y~aPE~~~~~~~~~~~Di~slG~  205 (295)
T 3ugc_A          182 FWYAPESLTESKFSVASDVWSFGV  205 (295)
T ss_dssp             GGCCHHHHHHCCCCHHHHHHHHHH
T ss_pred             ceeCcHHhcCCCCChHHHHHHHHH
Confidence            4889998776 4566799988643

>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}

Probab=99.95  E-value=3.4e-27  Score=248.68  Aligned_cols=176  Identities=22%  Similarity=0.323  Sum_probs=134.8

Q ss_pred             CCCceeeeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCccccc
Q psy9184         261 SALKNCKKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTEL  334 (562)
Q Consensus       261 ~~y~~~~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~l  334 (562)
                      .+|++.+.||+|+||.||+|      +.||||++....      ........+.+|+.+++.+..               
T Consensus         9 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~------~~~~~~~~~~~E~~~l~~l~~---------------   67 (388)
T 3oz6_A            9 RKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAF------QNSTDAQRTFREIMILTELSG---------------   67 (388)
T ss_dssp             TTEEEEEC-------CEEEEEETTTCCEEEEEEECC--------CCHHHHHHHHHHHHHHHHTTT---------------
T ss_pred             CceEEEEEeeeCCCeEEEEEEECCCCCEEEEEEecccc------cChHHHHHHHHHHHHHHhccC---------------
Confidence            57999999999999999999      789999987542      224445678899999999983               


Q ss_pred             ccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc--cCCHHHHHHHHHHHHHHHHHH
Q psy9184         335 LKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK--YRSPNQTYAMILQVVFSLAVA  412 (562)
Q Consensus       335 ~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~--~l~e~~i~~I~~QIl~aL~yL  412 (562)
                                ||||++++++|....           ...+|+|||||. |++...+.  .+++..+..++.||+.||.||
T Consensus        68 ----------h~niv~l~~~~~~~~-----------~~~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~i~~qi~~~L~~L  125 (388)
T 3oz6_A           68 ----------HENIVNLLNVLRADN-----------DRDVYLVFDYME-TDLHAVIRANILEPVHKQYVVYQLIKVIKYL  125 (388)
T ss_dssp             ----------CTTBCCEEEEEECTT-----------SSCEEEEEECCS-EEHHHHHHHTCCCHHHHHHHHHHHHHHHHHH
T ss_pred             ----------CCCCCeeeeEEecCC-----------CCEEEEEecccC-cCHHHHHHcCCCCHHHHHHHHHHHHHHHHHH
Confidence                      399999999986421           347999999997 44544443  489999999999999999999


Q ss_pred             HhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecC-----------------------
Q psy9184         413 EVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVG-----------------------  469 (562)
Q Consensus       413 H~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~-----------------------  469 (562)
                      |+ .||+||||||+|||++.++                    .+||+|||+|+....                       
T Consensus       126 H~-~~ivHrDlkp~NIll~~~~--------------------~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~  184 (388)
T 3oz6_A          126 HS-GGLLHRDMKPSNILLNAEC--------------------HVKVADFGLSRSFVNIRRVTNNIPLSINENTENFDDDQ  184 (388)
T ss_dssp             HH-TTEECCCCCGGGEEECTTC--------------------CEEECCCTTCEESSSCCCCCCCGGGCCC----------
T ss_pred             Hh-CCEEeCCCCHHHeEEcCCC--------------------CEEecCCccccccccccccccccccccccccccccccc
Confidence            99 7999999999999999886                    799999999987532                       


Q ss_pred             ---CcEEEeecCCCccccCC--CCCcHHHHHHHhhc
Q psy9184         470 ---EKICYYDLSQDEELFEG--EGDYQFDMYRMMRK  500 (562)
Q Consensus       470 ---~g~v~~~l~~~pelF~g--~~~~q~dIy~lm~~  500 (562)
                         ...+++..|++||++.+  ..+...|||++.-.
T Consensus       185 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~i  220 (388)
T 3oz6_A          185 PILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCI  220 (388)
T ss_dssp             -----CCCGGGGCCHHHHTTCCCCCTHHHHHHHHHH
T ss_pred             ccccCCcccCCcCCHHHhcCCCCCCChhhHHHHHHH
Confidence               12356778999998876  35666999885433

>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7

Probab=99.95  E-value=1.8e-27  Score=245.38  Aligned_cols=176  Identities=19%  Similarity=0.250  Sum_probs=142.9

Q ss_pred             CCCCCCceeeeeeccCceEEEEE-----------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhc-CCccccCC
Q psy9184         258 YPSSALKNCKKIGEGVYGEVFKL-----------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKET-SDLQYRTE  325 (562)
Q Consensus       258 ~~~~~y~~~~~LG~GsfG~Vyka-----------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L-~h~~~~~~  325 (562)
                      ++.++|.+.+.||+|+||.||+|           ..||+|++....       .....+.+.+|+.+++.+ .|      
T Consensus        42 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~-------~~~~~~~~~~E~~~l~~l~~h------  108 (344)
T 1rjb_A           42 FPRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKA-------DSSEREALMSELKMMTQLGSH------  108 (344)
T ss_dssp             CCGGGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC-------------CHHHHHHHHHHHHHCCC------
T ss_pred             cCHHHceeeeeecCCCCceeEEeeeeccccCCcceEEEEEeccccc-------CHHHHHHHHHHHHHHHhhcCC------
Confidence            34578999999999999999999           269999998542       223346788999999999 66      


Q ss_pred             CCCCcccccccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCcccccc-------------
Q psy9184         326 NSTPCFTELLKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIKY-------------  392 (562)
Q Consensus       326 n~~p~fv~l~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~~-------------  392 (562)
                                          |||+++++++..             .+.+|+||||++||++.+.+..             
T Consensus       109 --------------------p~iv~~~~~~~~-------------~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~  155 (344)
T 1rjb_A          109 --------------------ENIVNLLGACTL-------------SGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYE  155 (344)
T ss_dssp             --------------------TTBCCEEEEECS-------------SSSCEEEEECCTTCBHHHHHHTTTTCC--------
T ss_pred             --------------------CCeeeEEEEEee-------------CCccEEEEecCCCCcHHHHHhhccccccccccchh
Confidence                                999999998875             4578999999999988766532             


Q ss_pred             -------------CCHHHHHHHHHHHHHHHHHHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEE
Q psy9184         393 -------------RSPNQTYAMILQVVFSLAVAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTII  459 (562)
Q Consensus       393 -------------l~e~~i~~I~~QIl~aL~yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~  459 (562)
                                   +++.+++.++.||+.||.|||+ .||+||||||+|||++.++                    .+||+
T Consensus       156 ~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~-~~ivH~Dikp~NIll~~~~--------------------~~kL~  214 (344)
T 1rjb_A          156 NQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEF-KSCVHRDLAARNVLVTHGK--------------------VVKIC  214 (344)
T ss_dssp             -------------CCHHHHHHHHHHHHHHHHHHHH-TTEEETTCSGGGEEEETTT--------------------EEEEC
T ss_pred             hhcccccccccccCCHHHHHHHHHHHHHHHHHHHh-CCcccCCCChhhEEEcCCC--------------------cEEeC
Confidence                         6889999999999999999999 7999999999999999876                    79999


Q ss_pred             eccceeeecC-------CcEEEeecCCCccccCC-CCCcHHHHHHHhhc
Q psy9184         460 DFTISRCFVG-------EKICYYDLSQDEELFEG-EGDYQFDMYRMMRK  500 (562)
Q Consensus       460 DFGLSr~~~~-------~g~v~~~l~~~pelF~g-~~~~q~dIy~lm~~  500 (562)
                      |||+++....       ....++..|++||++.+ ..+...|||++.-.
T Consensus       215 Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~i  263 (344)
T 1rjb_A          215 DFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGIL  263 (344)
T ss_dssp             CCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHH
T ss_pred             CCccCcccccCccceeccCccCccCccCHHHhccCCCChhHhHHHHHHH
Confidence            9999986643       23445567999998765 45667999886433

>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*

Probab=99.95  E-value=7.6e-28  Score=267.81  Aligned_cols=231  Identities=15%  Similarity=0.101  Sum_probs=172.2

Q ss_pred             CCCCCceeeeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCccc
Q psy9184         259 PSSALKNCKKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFT  332 (562)
Q Consensus       259 ~~~~y~~~~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv  332 (562)
                      ..++|++.+.||+|+||.||+|      +.||||++....     .........+.+|+.+|+.++|             
T Consensus       182 ~~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAvK~l~k~~-----~~~~~~~~~~~~E~~iL~~l~h-------------  243 (576)
T 2acx_A          182 TKNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKR-----IKKRKGEAMALNEKQILEKVNS-------------  243 (576)
T ss_dssp             CGGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHH-----HHHTTCHHHHHHHHHHHHHCCC-------------
T ss_pred             cccceEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhHh-----hhhhHHHHHHHHHHHHHHHcCC-------------
Confidence            3467999999999999999999      789999998642     1122334678899999999998             


Q ss_pred             ccccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc-----cCCHHHHHHHHHHHHH
Q psy9184         333 ELLKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK-----YRSPNQTYAMILQVVF  407 (562)
Q Consensus       333 ~l~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~-----~l~e~~i~~I~~QIl~  407 (562)
                                   |||++++++|.+             .+.+|+||||++||++.+.+.     .+++..++.++.||+.
T Consensus       244 -------------p~Iv~l~~~~~~-------------~~~l~lVmEy~~gg~L~~~l~~~~~~~l~e~~~~~i~~qIl~  297 (576)
T 2acx_A          244 -------------RFVVSLAYAYET-------------KDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICC  297 (576)
T ss_dssp             -------------TTBCCEEEEEEC-------------SSEEEEEECCCCSCBHHHHHHSSSSCCCCHHHHHHHHHHHHH
T ss_pred             -------------CCEeeEEEEEee-------------CCEEEEEEEcCCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHH
Confidence                         999999999875             558999999999998876653     2899999999999999


Q ss_pred             HHHHHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecCC----cEEEeecCCCccc
Q psy9184         408 SLAVAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVGE----KICYYDLSQDEEL  483 (562)
Q Consensus       408 aL~yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~~----g~v~~~l~~~pel  483 (562)
                      ||.|||+ .||+||||||+|||++.++                    .+||+|||+|+.....    +.+++..|++||+
T Consensus       298 aL~yLH~-~gIvHrDLKPeNILld~~g--------------------~vKL~DFGla~~~~~~~~~~~~~GT~~Y~APEv  356 (576)
T 2acx_A          298 GLEDLHR-ERIVYRDLKPENILLDDHG--------------------HIRISDLGLAVHVPEGQTIKGRVGTVGYMAPEV  356 (576)
T ss_dssp             HHHHHHH-TTEECCCCCGGGEEECTTS--------------------CEEECCCTTCEECCTTCCEECCCSCGGGCCHHH
T ss_pred             HHHHHHH-CCEeccCCchheEEEeCCC--------------------CeEEEecccceecccCccccccCCCccccCHHH
Confidence            9999999 7999999999999999886                    7999999999887542    2346888999999


Q ss_pred             cCCC-CCcHHHHHHHhhcccCCCCCCCCCCChh---hhHHHHHHHHhhcccCCCCCCCchhHHHHHHHHHHHhcCCCcCc
Q psy9184         484 FEGE-GDYQFDMYRMMRKQCQNNWQNFTPKNNV---FWIHYLVDKATCLKKGYQYLRAPRHQAFELLEELGQNALHFDSC  559 (562)
Q Consensus       484 F~g~-~~~q~dIy~lm~~~~~~~W~~~~P~tn~---~wl~yl~~~Ll~~~~~~~~~~~~~~~~~~~l~~l~~~~l~~~s~  559 (562)
                      +.+. .+...|||++.-. +...+.+..|+...   .-...+..........++..-      -..+..|...||+.+..
T Consensus       357 l~~~~~~~~~DiwSLGvi-lyeLltG~~PF~~~~~~~~~~~i~~~i~~~~~~~p~~~------s~~~~dLI~~lL~~dP~  429 (576)
T 2acx_A          357 VKNERYTFSPDWWALGCL-LYEMIAGQSPFQQRKKKIKREEVERLVKEVPEEYSERF------SPQARSLCSQLLCKDPA  429 (576)
T ss_dssp             HTTCEESSHHHHHHHHHH-HHHHHHSSCSSSCSSSCCCHHHHHHHHHHCCCCCCTTS------CHHHHHHHHHHTCSSGG
T ss_pred             HcCCCCCccchHHHHHHH-HHHHHhCCCCCcccccchhHHHHHHHhhcccccCCccC------CHHHHHHHHHhccCCHH
Confidence            8874 5667999885333 32333344444221   112222333333122333221      23667778888888776


Q ss_pred             CC
Q psy9184         560 YE  561 (562)
Q Consensus       560 ~~  561 (562)
                      .|
T Consensus       430 ~R  431 (576)
T 2acx_A          430 ER  431 (576)
T ss_dssp             GS
T ss_pred             Hc
Confidence            65

>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}

Probab=99.95  E-value=3.1e-27  Score=254.47  Aligned_cols=177  Identities=19%  Similarity=0.247  Sum_probs=134.8

Q ss_pred             CCCCceeeeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCcccc
Q psy9184         260 SSALKNCKKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTE  333 (562)
Q Consensus       260 ~~~y~~~~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~  333 (562)
                      .++|++.+.||+|+||.||+|      +.||||++....      ......+.+.+|+.+|+.++|              
T Consensus        52 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~------~~~~~~~~~~~E~~~l~~l~h--------------  111 (458)
T 3rp9_A           52 PDRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVF------EDLIDCKRILREIAILNRLNH--------------  111 (458)
T ss_dssp             CTTEEECCC-------CEEEEEECC--CEEEEEEECSTT------SSHHHHHHHHHHHHHHHHCCC--------------
T ss_pred             CCCeEEeeEeeecCCeEEEEEEECCCCcEEEEEEechhh------cCHHHHHHHHHHHHHHHhCCC--------------
Confidence            478999999999999999999      789999997542      234455788999999999998              


Q ss_pred             cccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc---cCCHHHHHHHHHHHHHHHH
Q psy9184         334 LLKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK---YRSPNQTYAMILQVVFSLA  410 (562)
Q Consensus       334 l~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~---~l~e~~i~~I~~QIl~aL~  410 (562)
                                  |||++++++|....        ......+|+||||+. |++...+.   .+++..++.++.||+.||.
T Consensus       112 ------------~niv~l~~~~~~~~--------~~~~~~~~lv~e~~~-~~L~~~~~~~~~l~~~~~~~~~~qi~~aL~  170 (458)
T 3rp9_A          112 ------------DHVVKVLDIVIPKD--------VEKFDELYVVLEIAD-SDFKKLFRTPVYLTELHIKTLLYNLLVGVK  170 (458)
T ss_dssp             ------------TTBCCEEEECCCSC--------TTTCCCEEEEECCCS-EEHHHHHHSSCCCCHHHHHHHHHHHHHHHH
T ss_pred             ------------CCCCceEEEEecCC--------cccCceEEEEEeccc-cchhhhcccCCCCCHHHHHHHHHHHHHHHH
Confidence                        99999998885421        112457999999985 55555443   3899999999999999999


Q ss_pred             HHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecC---------------------
Q psy9184         411 VAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVG---------------------  469 (562)
Q Consensus       411 yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~---------------------  469 (562)
                      |||+ .||+||||||+|||++.++                    .+||+|||+|+....                     
T Consensus       171 ~LH~-~~iiHrDlKp~NILl~~~~--------------------~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~  229 (458)
T 3rp9_A          171 YVHS-AGILHRDLKPANCLVNQDC--------------------SVKVCDFGLARTVDYPENGNSQLPISPREDDMNLVT  229 (458)
T ss_dssp             HHHH-TTCBCCCCCGGGEEECTTC--------------------CEEECCCTTCBCTTSCTTCCCCCC------------
T ss_pred             HHHh-CCcCCCCCChhhEEECCCC--------------------CEeecccccchhccCccccccccccCcccccccccc
Confidence            9999 7999999999999999886                    799999999987531                     


Q ss_pred             -----------CcEEEeecCCCccccC-C-CCCcHHHHHHHh
Q psy9184         470 -----------EKICYYDLSQDEELFE-G-EGDYQFDMYRMM  498 (562)
Q Consensus       470 -----------~g~v~~~l~~~pelF~-g-~~~~q~dIy~lm  498 (562)
                                 .+.+++..|++||++. + ..+...|||++.
T Consensus       230 ~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~DiwSlG  271 (458)
T 3rp9_A          230 FPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIG  271 (458)
T ss_dssp             ---------------CCCTTCCHHHHTTCCCCCTHHHHHHHH
T ss_pred             ccccccccccccCCcccccccChHHhhCCCCCCcHhHHHHHH
Confidence                       2345588899999753 3 456678998853

>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*

Probab=99.95  E-value=1e-27  Score=246.33  Aligned_cols=176  Identities=20%  Similarity=0.217  Sum_probs=143.6

Q ss_pred             CCCCCceeeeeeccCceEEEEE----eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCccccc
Q psy9184         259 PSSALKNCKKIGEGVYGEVFKL----NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTEL  334 (562)
Q Consensus       259 ~~~~y~~~~~LG~GsfG~Vyka----~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~l  334 (562)
                      ...+|++.++||+|+||.||+|    +.||||++....         .......+|+.+++.++|               
T Consensus        22 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~vavK~~~~~~---------~~~~~~~~E~~~l~~l~h---------------   77 (322)
T 3soc_A           22 QSMPLQLLEVKARGRFGCVWKAQLLNEYVAVKIFPIQD---------KQSWQNEYEVYSLPGMKH---------------   77 (322)
T ss_dssp             TTEEEEEEEEEECSTTCEEEEEEETTEEEEEEEECGGG---------HHHHHHHHHHHTSTTCCC---------------
T ss_pred             chhhchhhheecccCceEEEEEEECCCEEEEEEeecCc---------hHHHHHHHHHHHHhcCCC---------------
Confidence            4578999999999999999999    899999997542         222345669999999988               


Q ss_pred             ccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc--cCCHHHHHHHHHHHHHHHHHH
Q psy9184         335 LKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK--YRSPNQTYAMILQVVFSLAVA  412 (562)
Q Consensus       335 ~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~--~l~e~~i~~I~~QIl~aL~yL  412 (562)
                                 |||+++++++....         .....+|+|||||++|++.+.+.  .+++..++.++.||+.||.||
T Consensus        78 -----------pniv~~~~~~~~~~---------~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~i~~qi~~al~~L  137 (322)
T 3soc_A           78 -----------ENILQFIGAEKRGT---------SVDVDLWLITAFHEKGSLSDFLKANVVSWNELCHIAETMARGLAYL  137 (322)
T ss_dssp             -----------TTBCCEEEEEEEEC---------SSSEEEEEEEECCTTCBHHHHHHHCCBCHHHHHHHHHHHHHHHHHH
T ss_pred             -----------CCchhhcceeccCC---------CCCceEEEEEecCCCCCHHHHHHhcCCCHHHHHHHHHHHHHHHHHH
Confidence                       99999999987632         11346899999999998877664  389999999999999999999


Q ss_pred             HhhC----------CeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecC-------CcEEEe
Q psy9184         413 EVEL----------EFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVG-------EKICYY  475 (562)
Q Consensus       413 H~~~----------~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~-------~g~v~~  475 (562)
                      |+ .          +|+||||||+|||++.++                    .+||+|||+|+....       .+..++
T Consensus       138 H~-~~~~l~~~~~~~ivH~Dlkp~Nill~~~~--------------------~~kL~DFg~a~~~~~~~~~~~~~~~~gt  196 (322)
T 3soc_A          138 HE-DIPGLKDGHKPAISHRDIKSKNVLLKNNL--------------------TACIADFGLALKFEAGKSAGDTHGQVGT  196 (322)
T ss_dssp             TC-CEEEETTEEECEEECSCCSGGGEEECTTC--------------------CEEECCCTTCEEECTTSCCCCCTTCCCC
T ss_pred             Hh-hccccccccCCCEEeCCCChHhEEECCCC--------------------eEEEccCCcccccccccCccccccCccC
Confidence            99 7          999999999999998876                    799999999987654       224568


Q ss_pred             ecCCCccccCCCC------CcHHHHHHHhh
Q psy9184         476 DLSQDEELFEGEG------DYQFDMYRMMR  499 (562)
Q Consensus       476 ~l~~~pelF~g~~------~~q~dIy~lm~  499 (562)
                      ..|++||++.+..      ....|||++.-
T Consensus       197 ~~y~aPE~~~~~~~~~~~~~~~~DiwslG~  226 (322)
T 3soc_A          197 RRYMAPEVLEGAINFQRDAFLRIDMYAMGL  226 (322)
T ss_dssp             GGGCCHHHHTTCCCCCHHHHHHHHHHHHHH
T ss_pred             ccccCHhhcccccccCcCCCccchhHHHHH
Confidence            8899999988732      22369988543

>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}

Probab=99.94  E-value=1.2e-27  Score=260.94  Aligned_cols=228  Identities=17%  Similarity=0.156  Sum_probs=171.1

Q ss_pred             CCCceeeeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCccccc
Q psy9184         261 SALKNCKKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTEL  334 (562)
Q Consensus       261 ~~y~~~~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~l  334 (562)
                      ++|.+.+.||+|+||.||+|      +.||||++....     .........+.+|+.+++.++|               
T Consensus        16 ~~Y~l~~~LG~G~fg~V~~a~~~~~g~~vAvK~i~~~~-----~~~~~~~~~~~~Ei~~l~~l~H---------------   75 (476)
T 2y94_A           16 GHYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQK-----IRSLDVVGKIRREIQNLKLFRH---------------   75 (476)
T ss_dssp             TTEEEEEEEECCSSSCEEEEEETTTCCEEEEEEEEHHH-----HHHTTTHHHHHHHHHHHTTCCC---------------
T ss_pred             cCEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhh-----ccCHHHHHHHHHHHHHHHhCCC---------------
Confidence            67999999999999999999      789999998542     1122335678899999999998               


Q ss_pred             ccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc---cCCHHHHHHHHHHHHHHHHH
Q psy9184         335 LKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK---YRSPNQTYAMILQVVFSLAV  411 (562)
Q Consensus       335 ~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~---~l~e~~i~~I~~QIl~aL~y  411 (562)
                                 |||+++++++.+             .+.+|+||||+.||++.+.+.   .+++.+++.++.||+.||.|
T Consensus        76 -----------pnIv~l~~~~~~-------------~~~~~lv~E~~~gg~L~~~l~~~~~l~~~~~~~i~~qi~~aL~~  131 (476)
T 2y94_A           76 -----------PHIIKLYQVIST-------------PSDIFMVMEYVSGGELFDYICKNGRLDEKESRRLFQQILSGVDY  131 (476)
T ss_dssp             -----------TTBCCEEEEEEC-------------SSEEEEEEECCSSEEHHHHTTSSSSCCHHHHHHHHHHHHHHHHH
T ss_pred             -----------CCCCcEEEEEEE-------------CCEEEEEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHH
Confidence                       999999999875             458999999999998877664   48999999999999999999


Q ss_pred             HHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecCC----cEEEeecCCCccccCCC
Q psy9184         412 AEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVGE----KICYYDLSQDEELFEGE  487 (562)
Q Consensus       412 LH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~~----g~v~~~l~~~pelF~g~  487 (562)
                      ||+ .||+||||||+|||++.++                    .+||+|||+|+.....    ..+++..|++||++.+.
T Consensus       132 LH~-~givHrDLkp~NIll~~~~--------------------~vkL~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~  190 (476)
T 2y94_A          132 CHR-HMVVHRDLKPENVLLDAHM--------------------NAKIADFGLSNMMSDGEFLRTSCGSPNYAAPEVISGR  190 (476)
T ss_dssp             HHT-TTEECSCCSGGGEEECTTC--------------------CEEECCCSSCEECCTTCCBCCCCSCSTTCCHHHHTTC
T ss_pred             HHH-CCCCcccccHHHEEEecCC--------------------CeEEEeccchhhccccccccccCCCcCeEChhhccCC
Confidence            999 7999999999999999886                    7999999999986542    34567889999999886


Q ss_pred             C--CcHHHHHHHhhcccCCCCCCCCCCChhhhHHHHHHHHhhcccCCCCCCCchhHHHHHHHHHHHhcCCCcCcCC
Q psy9184         488 G--DYQFDMYRMMRKQCQNNWQNFTPKNNVFWIHYLVDKATCLKKGYQYLRAPRHQAFELLEELGQNALHFDSCYE  561 (562)
Q Consensus       488 ~--~~q~dIy~lm~~~~~~~W~~~~P~tn~~wl~yl~~~Ll~~~~~~~~~~~~~~~~~~~l~~l~~~~l~~~s~~~  561 (562)
                      .  ....|||++.-.. ...+.+..|+.... ...+..++.. + .+..+..    .-..+..|.+.||+.+...|
T Consensus       191 ~~~~~~~DiwSlGvil-~elltG~~Pf~~~~-~~~~~~~i~~-~-~~~~p~~----~s~~~~~Li~~~L~~dP~~R  258 (476)
T 2y94_A          191 LYAGPEVDIWSSGVIL-YALLCGTLPFDDDH-VPTLFKKICD-G-IFYTPQY----LNPSVISLLKHMLQVDPMKR  258 (476)
T ss_dssp             CBCSHHHHHHHHHHHH-HHHHHSSCSSCCSS-SHHHHHHHHT-T-CCCCCTT----CCHHHHHHHHHHTCSSTTTS
T ss_pred             CCCCCcceehhhHHHH-HHHhhCCCCCCCCC-HHHHHHHHhc-C-CcCCCcc----CCHHHHHHHHHHcCCCchhC
Confidence            4  4569998864333 23334444553322 1222333333 1 1221111    12356677788888777665

>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*

Probab=99.94  E-value=2.3e-27  Score=244.31  Aligned_cols=234  Identities=19%  Similarity=0.136  Sum_probs=166.7

Q ss_pred             CCcee-eeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCccccc
Q psy9184         262 ALKNC-KKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTEL  334 (562)
Q Consensus       262 ~y~~~-~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~l  334 (562)
                      +|.+. +.||+|+||.||+|      +.||+|++.....      .......+.+|+.+++.+.+               
T Consensus        29 ~y~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~------~~~~~~~~~~e~~~l~~l~~---------------   87 (327)
T 3lm5_A           29 FYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRR------GQDCRAEILHEIAVLELAKS---------------   87 (327)
T ss_dssp             HEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESEET------TEECHHHHHHHHHHHHHTTT---------------
T ss_pred             EEeeccceeCCCCCeEEEEEEECCCCCEEEEEEEehhhc------chHHHHHHHHHHHHHHhccC---------------
Confidence            46666 89999999999999      7999999986431      12234678899999999987               


Q ss_pred             ccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc-----cCCHHHHHHHHHHHHHHH
Q psy9184         335 LKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK-----YRSPNQTYAMILQVVFSL  409 (562)
Q Consensus       335 ~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~-----~l~e~~i~~I~~QIl~aL  409 (562)
                                ||||++++++|.+             .+.+|+||||+.||++.+.+.     .+++.+++.++.||+.||
T Consensus        88 ----------~~~iv~~~~~~~~-------------~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~ql~~~L  144 (327)
T 3lm5_A           88 ----------CPRVINLHEVYEN-------------TSEIILILEYAAGGEIFSLCLPELAEMVSENDVIRLIKQILEGV  144 (327)
T ss_dssp             ----------CTTBCCEEEEEEC-------------SSEEEEEEECCTTEEGGGGGSSCC-CCCCHHHHHHHHHHHHHHH
T ss_pred             ----------CCCEEEEEEEEEe-------------CCeEEEEEEecCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHH
Confidence                      6999999999875             558999999999998877663     389999999999999999


Q ss_pred             HHHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecCC----cEEEeecCCCccccC
Q psy9184         410 AVAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVGE----KICYYDLSQDEELFE  485 (562)
Q Consensus       410 ~yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~~----g~v~~~l~~~pelF~  485 (562)
                      .|||+ .||+||||||+|||++.....                 ..+||+|||+++.....    ...++..|++||++.
T Consensus       145 ~~LH~-~givH~Dikp~NIl~~~~~~~-----------------~~~kL~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~  206 (327)
T 3lm5_A          145 YYLHQ-NNIVHLDLKPQNILLSSIYPL-----------------GDIKIVDFGMSRKIGHACELREIMGTPEYLAPEILN  206 (327)
T ss_dssp             HHHHH-TTEECSCCCGGGEEESCBTTB-----------------CCEEECCGGGCEEC---------CCCGGGCCHHHHT
T ss_pred             HHHHH-CCeecCcCChHHEEEecCCCC-----------------CcEEEeeCccccccCCccccccccCCcCccCCeeec
Confidence            99999 799999999999999873210                 17999999999876542    334677899999987


Q ss_pred             CC-CCcHHHHHHHhhcccCCCCCCCCCCChhhhHHHHHHHHhhcccCCCCCCCchhHHHHHHHHHHHhcCCCcCcCC
Q psy9184         486 GE-GDYQFDMYRMMRKQCQNNWQNFTPKNNVFWIHYLVDKATCLKKGYQYLRAPRHQAFELLEELGQNALHFDSCYE  561 (562)
Q Consensus       486 g~-~~~q~dIy~lm~~~~~~~W~~~~P~tn~~wl~yl~~~Ll~~~~~~~~~~~~~~~~~~~l~~l~~~~l~~~s~~~  561 (562)
                      +. .....|||++.-... ..+.+..|+.......... .+......+....  ....-..+.+|...+|.++...|
T Consensus       207 ~~~~~~~~DiwslG~il~-~ll~g~~pf~~~~~~~~~~-~i~~~~~~~~~~~--~~~~~~~~~~li~~~L~~dP~~R  279 (327)
T 3lm5_A          207 YDPITTATDMWNIGIIAY-MLLTHTSPFVGEDNQETYL-NISQVNVDYSEET--FSSVSQLATDFIQSLLVKNPEKR  279 (327)
T ss_dssp             TCCCCTHHHHHHHHHHHH-HHHHSSCSSCCSSHHHHHH-HHHHTCCCCCTTT--TTTSCHHHHHHHHHHSCSSGGGS
T ss_pred             CCCCCchhhHHHHHHHHH-HHHhCCCCCCCCCchHHHH-HHHhcccccCchh--hcccCHHHHHHHHHHcCCChhhC
Confidence            64 566799988644332 3334444543222111111 1122112222211  11223467778888998887665

>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}

Probab=99.94  E-value=1.5e-27  Score=251.38  Aligned_cols=228  Identities=19%  Similarity=0.219  Sum_probs=161.5

Q ss_pred             ceeeeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCcccccccc
Q psy9184         264 KNCKKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTELLKC  337 (562)
Q Consensus       264 ~~~~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~l~~~  337 (562)
                      ...+.||+|+||.||+|      +.||+|++....        ....+.+.+|+.+++.++|                  
T Consensus        92 ~~~~~lG~G~~g~Vy~a~~~~~g~~vavK~~~~~~--------~~~~~~~~~E~~~l~~l~h------------------  145 (373)
T 2x4f_A           92 SKTEILGGGRFGQVHKCEETATGLKLAAKIIKTRG--------MKDKEEVKNEISVMNQLDH------------------  145 (373)
T ss_dssp             EEEEECC-----CEEEEEETTTCCEEEEEEEECCS--------HHHHHHHHHHHHHHTTCCC------------------
T ss_pred             ecceEEecCcCEEEEEEEEcCCCcEEEEEEEcccc--------cccHHHHHHHHHHHHhCCC------------------
Confidence            34678999999999999      789999998653        2344678899999999998                  


Q ss_pred             cccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc----cCCHHHHHHHHHHHHHHHHHHH
Q psy9184         338 SCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK----YRSPNQTYAMILQVVFSLAVAE  413 (562)
Q Consensus       338 ~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~----~l~e~~i~~I~~QIl~aL~yLH  413 (562)
                              |||++++++|.+             .+.+|+||||++||++.+.+.    .+++.+++.++.||+.||.|||
T Consensus       146 --------pnIv~~~~~~~~-------------~~~~~lv~E~~~~~~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH  204 (373)
T 2x4f_A          146 --------ANLIQLYDAFES-------------KNDIVLVMEYVDGGELFDRIIDESYNLTELDTILFMKQICEGIRHMH  204 (373)
T ss_dssp             --------TTBCCEEEEEEC-------------SSEEEEEEECCTTCEEHHHHHHTGGGCCHHHHHHHHHHHHHHHHHHH
T ss_pred             --------CCCCeEEEEEEE-------------CCEEEEEEeCCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH
Confidence                    999999999875             558999999999998877663    4899999999999999999999


Q ss_pred             hhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecCC----cEEEeecCCCccccCCC-C
Q psy9184         414 VELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVGE----KICYYDLSQDEELFEGE-G  488 (562)
Q Consensus       414 ~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~~----g~v~~~l~~~pelF~g~-~  488 (562)
                      + .||+||||||+|||+..++.                  ..+||+|||+++.....    ..+++..|++||++.+. .
T Consensus       205 ~-~~ivH~Dlkp~NIll~~~~~------------------~~~kl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~  265 (373)
T 2x4f_A          205 Q-MYILHLDLKPENILCVNRDA------------------KQIKIIDFGLARRYKPREKLKVNFGTPEFLAPEVVNYDFV  265 (373)
T ss_dssp             H-TTEECCCCCGGGEEEEETTT------------------TEEEECCCSSCEECCTTCBCCCCCSSCTTCCHHHHTTCBC
T ss_pred             H-CCcccccCCHHHEEEecCCC------------------CcEEEEeCCCceecCCccccccccCCCcEeChhhccCCCC
Confidence            9 79999999999999954321                  17999999999987542    23457789999988764 5


Q ss_pred             CcHHHHHHHhhcccCCCCCCCCCCChhhhHHHHHHHHhhcccCCCCCCCchhHHHHHHHHHHHhcCCCcCcCC
Q psy9184         489 DYQFDMYRMMRKQCQNNWQNFTPKNNVFWIHYLVDKATCLKKGYQYLRAPRHQAFELLEELGQNALHFDSCYE  561 (562)
Q Consensus       489 ~~q~dIy~lm~~~~~~~W~~~~P~tn~~wl~yl~~~Ll~~~~~~~~~~~~~~~~~~~l~~l~~~~l~~~s~~~  561 (562)
                      +...|||++.-.. ...+.+..|+....-... ...++.....+..  ......-..+.+|...||.++...|
T Consensus       266 ~~~~DiwslG~il-~elltg~~pf~~~~~~~~-~~~i~~~~~~~~~--~~~~~~~~~~~~li~~~L~~dp~~R  334 (373)
T 2x4f_A          266 SFPTDMWSVGVIA-YMLLSGLSPFLGDNDAET-LNNILACRWDLED--EEFQDISEEAKEFISKLLIKEKSWR  334 (373)
T ss_dssp             CHHHHHHHHHHHH-HHHHHSSCTTCCSSHHHH-HHHHHHTCCCSCS--GGGTTSCHHHHHHHHTTSCSSGGGS
T ss_pred             CcHHhHHHHHHHH-HHHHhCCCCCCCCCHHHH-HHHHHhccCCCCh--hhhccCCHHHHHHHHHHcCCChhhC
Confidence            6679998864333 233344445432221111 2223321222221  1111124567888899999887765

>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}

Probab=99.94  E-value=8.1e-28  Score=247.79  Aligned_cols=237  Identities=18%  Similarity=0.174  Sum_probs=169.2

Q ss_pred             CCCceeeeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCccccc
Q psy9184         261 SALKNCKKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTEL  334 (562)
Q Consensus       261 ~~y~~~~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~l  334 (562)
                      .+|++.+.||+|+||.||+|      ..||+|++......   .......+.+.+|+.+++.++|               
T Consensus        26 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~---~~~~~~~~~~~~E~~~l~~l~h---------------   87 (345)
T 3hko_A           26 KKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIR---QINPKDVERIKTEVRLMKKLHH---------------   87 (345)
T ss_dssp             HHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHH---C---CHHHHHHHHHHHHHHCCC---------------
T ss_pred             hheeecceeeecCCeEEEEEEECCCCceEEEeehhhhhhc---ccCHHHHHHHHHHHHHHHhCCC---------------
Confidence            46899999999999999999      68999999754200   0123445788999999999998               


Q ss_pred             ccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc-----------------------
Q psy9184         335 LKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK-----------------------  391 (562)
Q Consensus       335 ~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~-----------------------  391 (562)
                                 |||++++++|.+             .+..|+|||||+||++.+.+.                       
T Consensus        88 -----------pniv~~~~~~~~-------------~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~  143 (345)
T 3hko_A           88 -----------PNIARLYEVYED-------------EQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCP  143 (345)
T ss_dssp             -----------TTBCCEEEEEEC-------------SSEEEEEEECCCSCBHHHHEEEEEETTTTEEEEEEECCCCCCSH
T ss_pred             -----------CCcceeehhhcc-------------CCeEEEEEeCCCCCcHHHHHHHhhcccccccccccccccccccc
Confidence                       999999999875             558999999999998876553                       


Q ss_pred             --------------------cCCHHHHHHHHHHHHHHHHHHHhhCCeEeccCCCCCEEEccCCCCCcccccCCccccccc
Q psy9184         392 --------------------YRSPNQTYAMILQVVFSLAVAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKT  451 (562)
Q Consensus       392 --------------------~l~e~~i~~I~~QIl~aL~yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~  451 (562)
                                          .+++..++.++.||+.||.|||+ .+|+||||||+|||++.++.                
T Consensus       144 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~-~~ivH~Dlkp~NIll~~~~~----------------  206 (345)
T 3hko_A          144 ECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSALHYLHN-QGICHRDIKPENFLFSTNKS----------------  206 (345)
T ss_dssp             HHHHHHHHSCC--CEEECCHHHHHHHHHHHHHHHHHHHHHHHH-TTEECCCCCGGGEEESCSSS----------------
T ss_pred             cccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHH-CCccccCCChhhEEEecCCC----------------
Confidence                                13577889999999999999999 79999999999999987642                


Q ss_pred             CCceEEEEeccceeeecC---------CcEEEeecCCCccccCC---CCCcHHHHHHHhhcccCCCCCCCCCCChhhhHH
Q psy9184         452 AGVQVTIIDFTISRCFVG---------EKICYYDLSQDEELFEG---EGDYQFDMYRMMRKQCQNNWQNFTPKNNVFWIH  519 (562)
Q Consensus       452 ~g~~vKL~DFGLSr~~~~---------~g~v~~~l~~~pelF~g---~~~~q~dIy~lm~~~~~~~W~~~~P~tn~~wl~  519 (562)
                        ..+||+|||+|+....         ....++..|++||++.+   ..+...|||++.-.. ...+.+..|+.......
T Consensus       207 --~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~il-~el~~g~~pf~~~~~~~  283 (345)
T 3hko_A          207 --FEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPKCDAWSAGVLL-HLLLMGAVPFPGVNDAD  283 (345)
T ss_dssp             --CCEEECCCTTCEEGGGTTCC--------CCCGGGCCHHHHTCSSSCCCTHHHHHHHHHHH-HHHHHSSCSSCCSSHHH
T ss_pred             --ceEEEeeccccccccccCccccccccccCCCccccCchhhccCCCCCCcHHHHHHHHHHH-HHHHHCCCCCCCCChHH
Confidence              2699999999987543         23345778999999865   345679998864333 23444555554333222


Q ss_pred             HHHHHHhhcccCCCCCCCchhHHHHHHHHHHHhcCCCcCcCCC
Q psy9184         520 YLVDKATCLKKGYQYLRAPRHQAFELLEELGQNALHFDSCYEM  562 (562)
Q Consensus       520 yl~~~Ll~~~~~~~~~~~~~~~~~~~l~~l~~~~l~~~s~~~~  562 (562)
                      .+ ..++.....+..+.  ....-..+.+|...+|.++...|+
T Consensus       284 ~~-~~~~~~~~~~~~~~--~~~~~~~~~~li~~~l~~~p~~Rp  323 (345)
T 3hko_A          284 TI-SQVLNKKLCFENPN--YNVLSPLARDLLSNLLNRNVDERF  323 (345)
T ss_dssp             HH-HHHHHCCCCTTSGG--GGGSCHHHHHHHHHHSCSCTTTSC
T ss_pred             HH-HHHHhcccccCCcc--cccCCHHHHHHHHHHcCCChhHCC
Confidence            22 22333122222211  111234677788888888877663

>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*

Probab=99.94  E-value=2.6e-27  Score=243.75  Aligned_cols=226  Identities=16%  Similarity=0.212  Sum_probs=166.0

Q ss_pred             CceeeeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCccccccc
Q psy9184         263 LKNCKKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTELLK  336 (562)
Q Consensus       263 y~~~~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~l~~  336 (562)
                      |...++||+|+||.||+|      +.||||++....        ....+.+.+|+.+++.++|                 
T Consensus        47 ~~~~~~lg~G~~g~V~~a~~~~~g~~vavK~~~~~~--------~~~~~~~~~E~~~l~~l~h-----------------  101 (321)
T 2c30_A           47 LDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRK--------QQRRELLFNEVVIMRDYQH-----------------  101 (321)
T ss_dssp             EEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTT--------CCSHHHHHHHHHHHTTCCC-----------------
T ss_pred             hhccEEeccCCCeEEEEEEECCCCcEEEEEEEeccc--------hhHHHHHHHHHHHHHhCCC-----------------
Confidence            667789999999999999      789999998653        1233567899999999998                 


Q ss_pred             ccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc--cCCHHHHHHHHHHHHHHHHHHHh
Q psy9184         337 CSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK--YRSPNQTYAMILQVVFSLAVAEV  414 (562)
Q Consensus       337 ~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~--~l~e~~i~~I~~QIl~aL~yLH~  414 (562)
                               |||+++++++..             .+..|+||||+.||++.+.+.  .+++.++..++.||+.||.|||+
T Consensus       102 ---------~niv~~~~~~~~-------------~~~~~lv~e~~~~~~L~~~l~~~~l~~~~~~~i~~qi~~~L~~LH~  159 (321)
T 2c30_A          102 ---------FNVVEMYKSYLV-------------GEELWVLMEFLQGGALTDIVSQVRLNEEQIATVCEAVLQALAYLHA  159 (321)
T ss_dssp             ---------TTBCCEEEEEEE-------------TTEEEEEECCCCSCBHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred             ---------CCcceEEEEEEE-------------CCEEEEEEecCCCCCHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHH
Confidence                     999999998875             458999999999997766554  48999999999999999999999


Q ss_pred             hCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecC-----CcEEEeecCCCccccCCC-C
Q psy9184         415 ELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVG-----EKICYYDLSQDEELFEGE-G  488 (562)
Q Consensus       415 ~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~-----~g~v~~~l~~~pelF~g~-~  488 (562)
                       .||+||||||+|||++.++                    .+||+|||+++....     ....++..|++||++.+. .
T Consensus       160 -~~ivH~Dlkp~NIll~~~~--------------------~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~  218 (321)
T 2c30_A          160 -QGVIHRDIKSDSILLTLDG--------------------RVKLSDFGFCAQISKDVPKRKSLVGTPYWMAPEVISRSLY  218 (321)
T ss_dssp             -TTEECCCCSGGGEEECTTC--------------------CEEECCCTTCEECCSSSCCBCCCCSCGGGCCHHHHTTCCB
T ss_pred             -CCeecCCCCHHHEEECCCC--------------------cEEEeeeeeeeecccCccccccccCCccccCHhhhcCCCC
Confidence             7999999999999999876                    799999999987654     233567789999988764 5


Q ss_pred             CcHHHHHHHhhcccCCCCCCCCCCChhhhHHHHHHHHhhcccCCCCCCCchhHHHHHHHHHHHhcCCCcCcCC
Q psy9184         489 DYQFDMYRMMRKQCQNNWQNFTPKNNVFWIHYLVDKATCLKKGYQYLRAPRHQAFELLEELGQNALHFDSCYE  561 (562)
Q Consensus       489 ~~q~dIy~lm~~~~~~~W~~~~P~tn~~wl~yl~~~Ll~~~~~~~~~~~~~~~~~~~l~~l~~~~l~~~s~~~  561 (562)
                      ....|||++.-... ..+.+..|+....... ....+.. .....  .......-..+.+|...+|.++...|
T Consensus       219 ~~~~Dv~slG~il~-el~~g~~pf~~~~~~~-~~~~~~~-~~~~~--~~~~~~~~~~l~~li~~~l~~dp~~R  286 (321)
T 2c30_A          219 ATEVDIWSLGIMVI-EMVDGEPPYFSDSPVQ-AMKRLRD-SPPPK--LKNSHKVSPVLRDFLERMLVRDPQER  286 (321)
T ss_dssp             CTHHHHHHHHHHHH-HHHHSSCTTTTSCHHH-HHHHHHH-SSCCC--CTTGGGSCHHHHHHHHHHSCSSTTTS
T ss_pred             CchhhHHHHHHHHH-HHHhCCCCCCCCCHHH-HHHHHhc-CCCCC--cCccccCCHHHHHHHHHHccCChhhC
Confidence            66799988644333 2333444442221111 1222333 11111  11111123457778888888887765

>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...

Probab=99.94  E-value=1.6e-27  Score=238.65  Aligned_cols=230  Identities=15%  Similarity=0.190  Sum_probs=167.9

Q ss_pred             CCCCCceeeeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCccc
Q psy9184         259 PSSALKNCKKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFT  332 (562)
Q Consensus       259 ~~~~y~~~~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv  332 (562)
                      ..++|++.+.||+|+||.||+|      ..||+|++....     .........+.+|+.+++.++|             
T Consensus         7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-----~~~~~~~~~~~~e~~~l~~l~h-------------   68 (279)
T 3fdn_A            7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQ-----LEKAGVEHQLRREVEIQSHLRH-------------   68 (279)
T ss_dssp             CGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHH-----HHHHTCHHHHHHHHHHHTTCCC-------------
T ss_pred             ecccEEEeeEEecCCCeEEEEEEEccCCcEEEEEEEeccc-----cchhhHHHHHHHHHHHHHcCCC-------------
Confidence            3467999999999999999999      689999997542     1222334678899999999998             


Q ss_pred             ccccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc---cCCHHHHHHHHHHHHHHH
Q psy9184         333 ELLKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK---YRSPNQTYAMILQVVFSL  409 (562)
Q Consensus       333 ~l~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~---~l~e~~i~~I~~QIl~aL  409 (562)
                                   |||+++++++.+             .+..|+||||+++|++.+.+.   .+++..++.++.||+.||
T Consensus        69 -------------~~i~~~~~~~~~-------------~~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~qi~~~l  122 (279)
T 3fdn_A           69 -------------PNILRLYGYFHD-------------ATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANAL  122 (279)
T ss_dssp             -------------TTBCCEEEEEEC-------------SSEEEEEECCCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHH
T ss_pred             -------------CCCcchhheEec-------------CCEEEEEEecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHH
Confidence                         999999999875             558999999999988766654   489999999999999999


Q ss_pred             HHHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecC---CcEEEeecCCCccccCC
Q psy9184         410 AVAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVG---EKICYYDLSQDEELFEG  486 (562)
Q Consensus       410 ~yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~---~g~v~~~l~~~pelF~g  486 (562)
                      .|||+ .||+||||||+|||++.++                    .++|+|||++.....   ....++..|++||++.+
T Consensus       123 ~~LH~-~~i~H~dlkp~Nili~~~~--------------------~~~l~Dfg~~~~~~~~~~~~~~~~~~y~aPE~~~~  181 (279)
T 3fdn_A          123 SYCHS-KRVIHRDIKPENLLLGSAG--------------------ELKIADFGWSVHAPSSRRTDLCGTLDYLPPEMIEG  181 (279)
T ss_dssp             HHHHT-TTCEECCCCGGGEEECTTS--------------------CEEECSCCEESCC--------CCCCTTCCHHHHTT
T ss_pred             HHHHh-CCEecccCChHhEEEcCCC--------------------CEEEEeccccccCCcccccccCCCCCccCHhHhcc
Confidence            99999 7999999999999998886                    799999999876543   23345778899998877


Q ss_pred             C-CCcHHHHHHHhhcccCCCCCCCCCCChhhhHHHHHHHHhhcccCCCCCCCchhHHHHHHHHHHHhcCCCcCcCC
Q psy9184         487 E-GDYQFDMYRMMRKQCQNNWQNFTPKNNVFWIHYLVDKATCLKKGYQYLRAPRHQAFELLEELGQNALHFDSCYE  561 (562)
Q Consensus       487 ~-~~~q~dIy~lm~~~~~~~W~~~~P~tn~~wl~yl~~~Ll~~~~~~~~~~~~~~~~~~~l~~l~~~~l~~~s~~~  561 (562)
                      . .....|||++.-... ..+.+..|+........ ...+......++...      -..+.+|...+|.++...|
T Consensus       182 ~~~~~~~Di~slG~il~-~l~~g~~p~~~~~~~~~-~~~~~~~~~~~~~~~------~~~~~~li~~~l~~~p~~R  249 (279)
T 3fdn_A          182 RMHDEKVDLWSLGVLCY-EFLVGKPPFEANTYQET-YKRISRVEFTFPDFV------TEGARDLISRLLKHNPSQR  249 (279)
T ss_dssp             CCCCTTHHHHHHHHHHH-HHHHSSCTTCCSSHHHH-HHHHHHTCCCCCTTS------CHHHHHHHHHHCCSSGGGS
T ss_pred             CCCCccchhHhHHHHHH-HHHHCCCCCCCCcHHHH-HHHHHhCCCCCCCcC------CHHHHHHHHHHhccChhhC
Confidence            4 455689988643332 33344445433322222 222222122222221      2356777888888877655

>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*

Probab=99.94  E-value=4.9e-27  Score=240.80  Aligned_cols=184  Identities=19%  Similarity=0.244  Sum_probs=133.9

Q ss_pred             CCCCceeeeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCcccc
Q psy9184         260 SSALKNCKKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTE  333 (562)
Q Consensus       260 ~~~y~~~~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~  333 (562)
                      .++|++.+.||+|+||.||+|      +.||+|++.....       ......+.+|+.+++.++|              
T Consensus         4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-------~~~~~~~~~E~~~l~~l~h--------------   62 (317)
T 2pmi_A            4 SSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSE-------EGTPSTAIREISLMKELKH--------------   62 (317)
T ss_dssp             ---------------CEEEEEECSSSCCEEEEEEEECCST-------TCSCHHHHHHHHHHTTCCB--------------
T ss_pred             ccceeEeeEECCCCCEEEEEEEECCCCcEEEEEEeecccc-------cccHHHHHHHHHHHHhcCC--------------
Confidence            367999999999999999999      7899999986531       1222467899999999998              


Q ss_pred             cccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc---------cCCHHHHHHHHHH
Q psy9184         334 LLKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK---------YRSPNQTYAMILQ  404 (562)
Q Consensus       334 l~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~---------~l~e~~i~~I~~Q  404 (562)
                                  |||+++++++.+             ++.+|+||||+. |++.+.+.         .+++..++.++.|
T Consensus        63 ------------p~iv~~~~~~~~-------------~~~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~~~~~~~~q  116 (317)
T 2pmi_A           63 ------------ENIVRLYDVIHT-------------ENKLTLVFEFMD-NDLKKYMDSRTVGNTPRGLELNLVKYFQWQ  116 (317)
T ss_dssp             ------------TTBCCEEEEECC-------------TTEEEEEEECCC-CBHHHHHHHHHSSSCCCCCCHHHHHHHHHH
T ss_pred             ------------CCcceEEEEEEE-------------CCeEEEEEEecC-CCHHHHHHhccccccccCCCHHHHHHHHHH
Confidence                        999999999875             568999999998 55655442         3889999999999


Q ss_pred             HHHHHHHHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecC-----CcEEEeecCC
Q psy9184         405 VVFSLAVAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVG-----EKICYYDLSQ  479 (562)
Q Consensus       405 Il~aL~yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~-----~g~v~~~l~~  479 (562)
                      |+.||.|||+ .||+||||||+|||++.++                    .+||+|||+|+....     ....++..|+
T Consensus       117 i~~aL~~lH~-~~ivH~Dlkp~NIl~~~~~--------------------~~kl~Dfg~~~~~~~~~~~~~~~~~t~~y~  175 (317)
T 2pmi_A          117 LLQGLAFCHE-NKILHRDLKPQNLLINKRG--------------------QLKLGDFGLARAFGIPVNTFSSEVVTLWYR  175 (317)
T ss_dssp             HHHHHHHHHH-TTEECCCCCGGGEEECTTC--------------------CEEECCCSSCEETTSCCCCCCCCCSCCTTC
T ss_pred             HHHHHHHHHH-CCeeeCCCChHHeEEcCCC--------------------CEEECcCccceecCCCcccCCCCccccccc
Confidence            9999999999 7999999999999999886                    799999999987643     2345578899


Q ss_pred             CccccCCC--CCcHHHHHHHhhcccCCCCCCCCCC
Q psy9184         480 DEELFEGE--GDYQFDMYRMMRKQCQNNWQNFTPK  512 (562)
Q Consensus       480 ~pelF~g~--~~~q~dIy~lm~~~~~~~W~~~~P~  512 (562)
                      +||++.+.  .+...|||++.-... ..+.+..|+
T Consensus       176 aPE~~~~~~~~~~~~DiwslG~il~-el~~g~~pf  209 (317)
T 2pmi_A          176 APDVLMGSRTYSTSIDIWSCGCILA-EMITGKPLF  209 (317)
T ss_dssp             CHHHHTTCCCCCTHHHHHHHHHHHH-HHHHSSCSC
T ss_pred             CchHhhCCCCCCcHHHHHHHHHHHH-HHHhCCCCC
Confidence            99998763  466799988643332 333344444

>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A

Probab=99.94  E-value=4e-27  Score=242.92  Aligned_cols=226  Identities=20%  Similarity=0.232  Sum_probs=149.8

Q ss_pred             eeeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCcccccccccc
Q psy9184         266 CKKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTELLKCSC  339 (562)
Q Consensus       266 ~~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~l~~~~i  339 (562)
                      .+.||+|+||.||+|      +.||||++...           ....+.+|+.+++.+.+                    
T Consensus        16 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~-----------~~~~~~~e~~~l~~l~~--------------------   64 (325)
T 3kn6_A           16 DKPLGEGSFSICRKCVHKKSNQAFAVKIISKR-----------MEANTQKEITALKLCEG--------------------   64 (325)
T ss_dssp             SCCSEEETTEEEEEEEETTTCCEEEEEEEEGG-----------GHHHHHHHHHHHHHTTT--------------------
T ss_pred             CCccccCCCeEEEEEEECCCCCEEEEEEEChh-----------hhhhHHHHHHHHHHhcC--------------------
Confidence            378999999999999      78999999753           12456789999999984                    


Q ss_pred             cCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc---cCCHHHHHHHHHHHHHHHHHHHhhC
Q psy9184         340 VRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK---YRSPNQTYAMILQVVFSLAVAEVEL  416 (562)
Q Consensus       340 v~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~---~l~e~~i~~I~~QIl~aL~yLH~~~  416 (562)
                           ||||++++++|.+             +...|+||||++||++.+.+.   .+++.+++.++.||+.||.|||+ .
T Consensus        65 -----h~niv~~~~~~~~-------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~LH~-~  125 (325)
T 3kn6_A           65 -----HPNIVKLHEVFHD-------------QLHTFLVMELLNGGELFERIKKKKHFSETEASYIMRKLVSAVSHMHD-V  125 (325)
T ss_dssp             -----CTTBCCEEEEEEC-------------SSEEEEEECCCCSCBHHHHHHHCSCCCHHHHHHHHHHHHHHHHHHHH-T
T ss_pred             -----CCCeeEEEEEEEc-------------CCEEEEEEEccCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHH-C
Confidence                 4999999999975             558999999999998877664   48999999999999999999999 7


Q ss_pred             CeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecC-----CcEEEeecCCCccccCCC-CCc
Q psy9184         417 EFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVG-----EKICYYDLSQDEELFEGE-GDY  490 (562)
Q Consensus       417 ~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~-----~g~v~~~l~~~pelF~g~-~~~  490 (562)
                      ||+||||||+|||++.++.                 ...+||+|||+|+....     ....++..|++||++.+. .+.
T Consensus       126 ~ivH~Dlkp~NIll~~~~~-----------------~~~~kl~Dfg~a~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~  188 (325)
T 3kn6_A          126 GVVHRDLKPENLLFTDEND-----------------NLEIKIIDFGFARLKPPDNQPLKTPCFTLHYAAPELLNQNGYDE  188 (325)
T ss_dssp             TEECCCCCGGGEEEEC---------------------CEEEECCCTTCEECCC----------------------CCCCH
T ss_pred             CCeecCCCHHHEEEecCCC-----------------cccEEEeccccceecCCCCCcccccCCCcCccCHHHhcCCCCCC
Confidence            9999999999999987642                 13799999999987654     234457889999998774 566


Q ss_pred             HHHHHHHhhcccCCCCCCCCCCChh------hhHHHHHHHHhhcccCCCCCCCchhHHHHHHHHHHHhcCCCcCcCC
Q psy9184         491 QFDMYRMMRKQCQNNWQNFTPKNNV------FWIHYLVDKATCLKKGYQYLRAPRHQAFELLEELGQNALHFDSCYE  561 (562)
Q Consensus       491 q~dIy~lm~~~~~~~W~~~~P~tn~------~wl~yl~~~Ll~~~~~~~~~~~~~~~~~~~l~~l~~~~l~~~s~~~  561 (562)
                      ..|||++.-... ..+.+..|+...      .....+..++..  ..+..........-..+..|.+.+|.++...|
T Consensus       189 ~~DiwslG~il~-~ll~g~~pf~~~~~~~~~~~~~~~~~~i~~--~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R  262 (325)
T 3kn6_A          189 SCDLWSLGVILY-TMLSGQVPFQSHDRSLTCTSAVEIMKKIKK--GDFSFEGEAWKNVSQEAKDLIQGLLTVDPNKR  262 (325)
T ss_dssp             HHHHHHHHHHHH-HHHHSSCTTC-------CCCHHHHHHHHTT--TCCCCCSHHHHTSCHHHHHHHHHHHCCCTTTC
T ss_pred             ccchHHHHHHHH-HHHhCCCCCCCCccccccccHHHHHHHHHc--CCCCCCcccccCCCHHHHHHHHHHCCCChhHC
Confidence            699988543332 222333343211      111222333333  12221111111124577888899999887766

>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A

Probab=99.94  E-value=3.2e-27  Score=238.09  Aligned_cols=184  Identities=19%  Similarity=0.262  Sum_probs=144.9

Q ss_pred             CCCceeeeeeccCceEEEEE-----eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCcccccc
Q psy9184         261 SALKNCKKIGEGVYGEVFKL-----NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTELL  335 (562)
Q Consensus       261 ~~y~~~~~LG~GsfG~Vyka-----~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~l~  335 (562)
                      ++|++.+.||+|+||.||+|     +.||+|++....      ........+.+|+.+++.++|                
T Consensus         2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~aiK~~~~~~------~~~~~~~~~~~E~~~l~~l~h----------------   59 (288)
T 1ob3_A            2 EKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEK------EDEGIPSTTIREISILKELKH----------------   59 (288)
T ss_dssp             CSEEEEEEEEEETTEEEEEEEETTSCEEEEEEECCSS------GGGCCCHHHHHHHHGGGGCCC----------------
T ss_pred             ccchhhhhcccCCCEEEEEEEcCCCCEEEEEEEeccc------cccccchhHHHHHHHHHhcCC----------------
Confidence            57999999999999999999     789999997653      112223567899999999998                


Q ss_pred             cccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc----cCCHHHHHHHHHHHHHHHHH
Q psy9184         336 KCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK----YRSPNQTYAMILQVVFSLAV  411 (562)
Q Consensus       336 ~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~----~l~e~~i~~I~~QIl~aL~y  411 (562)
                                |||+++++++.+             .+.+|+||||+.+ ++.+.+.    .+++.+++.++.||+.||.|
T Consensus        60 ----------~~iv~~~~~~~~-------------~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~  115 (288)
T 1ob3_A           60 ----------SNIVKLYDVIHT-------------KKRLVLVFEHLDQ-DLKKLLDVCEGGLESVTAKSFLLQLLNGIAY  115 (288)
T ss_dssp             ----------TTBCCEEEEEEC-------------SSCEEEEEECCSE-EHHHHHHTSTTCCCHHHHHHHHHHHHHHHHH
T ss_pred             ----------CCEeeeeeEEcc-------------CCeEEEEEEecCC-CHHHHHHhcccCCCHHHHHHHHHHHHHHHHH
Confidence                      999999999875             4589999999985 5554442    38899999999999999999


Q ss_pred             HHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecC-----CcEEEeecCCCccccCC
Q psy9184         412 AEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVG-----EKICYYDLSQDEELFEG  486 (562)
Q Consensus       412 LH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~-----~g~v~~~l~~~pelF~g  486 (562)
                      ||+ .||+||||||+|||++.++                    .+||+|||+|+....     ....++..|++||++.+
T Consensus       116 lH~-~~i~H~dlkp~Nil~~~~~--------------------~~kl~Dfg~~~~~~~~~~~~~~~~~t~~y~aPE~~~~  174 (288)
T 1ob3_A          116 CHD-RRVLHRDLKPQNLLINREG--------------------ELKIADFGLARAFGIPVRKYTHEIVTLWYRAPDVLMG  174 (288)
T ss_dssp             HHH-TTCCCSCCCGGGEEECTTS--------------------CEEECCTTHHHHHCC---------CCCTTCCHHHHTT
T ss_pred             HHH-CCeecCCCCHHHEEEcCCC--------------------CEEEeECccccccCccccccccccccccccCchheeC
Confidence            999 7999999999999999886                    799999999976542     23455788999999876


Q ss_pred             C--CCcHHHHHHHhhcccCCCCCCCCCC
Q psy9184         487 E--GDYQFDMYRMMRKQCQNNWQNFTPK  512 (562)
Q Consensus       487 ~--~~~q~dIy~lm~~~~~~~W~~~~P~  512 (562)
                      .  .+...|||++.-... ..+.+..|+
T Consensus       175 ~~~~~~~~DiwslG~il~-~l~~g~~pf  201 (288)
T 1ob3_A          175 SKKYSTTIDIWSVGCIFA-EMVNGTPLF  201 (288)
T ss_dssp             CCSCCTHHHHHHHHHHHH-HHHHSSCSC
T ss_pred             CCCCCcHHHHHHHHHHHH-HHHhCCCCC
Confidence            3  466799988643332 233344444

>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*

Probab=99.94  E-value=1.9e-27  Score=252.03  Aligned_cols=229  Identities=16%  Similarity=0.168  Sum_probs=162.7

Q ss_pred             CCCceeeeeeccCceEEEEE-----eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCcccccc
Q psy9184         261 SALKNCKKIGEGVYGEVFKL-----NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTELL  335 (562)
Q Consensus       261 ~~y~~~~~LG~GsfG~Vyka-----~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~l~  335 (562)
                      .+|++.+.||+|+||.||+|     +.||||++....      ......+.+.+|+.+++.+.|.               
T Consensus        56 ~~y~~~~~LG~G~fg~Vy~~~~~~~~~vaiK~~~~~~------~~~~~~~~~~~Ei~~l~~l~~~---------------  114 (390)
T 2zmd_A           56 RIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEE------ADNQTLDSYRNEIAYLNKLQQH---------------  114 (390)
T ss_dssp             EEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECTT------CCHHHHHHHHHHHHHHHHHTTT---------------
T ss_pred             CceEEEEEEccCCCeEEEEEEcCCCCEEEEEEEeccc------ccHHHHHHHHHHHHHHHHcccC---------------
Confidence            45999999999999999999     789999998753      1344567889999999999751               


Q ss_pred             cccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc---cCCHHHHHHHHHHHHHHHHHH
Q psy9184         336 KCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK---YRSPNQTYAMILQVVFSLAVA  412 (562)
Q Consensus       336 ~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~---~l~e~~i~~I~~QIl~aL~yL  412 (562)
                               ||||+++++++..             ++.+|+||| +.+|++.+.+.   .+++.+++.++.||+.||.||
T Consensus       115 ---------~~~iv~~~~~~~~-------------~~~~~lv~E-~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~l  171 (390)
T 2zmd_A          115 ---------SDKIIRLYDYEIT-------------DQYIYMVME-CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTI  171 (390)
T ss_dssp             ---------CTTBCCEEEEEEC-------------SSEEEEEEE-CCSEEHHHHHHHCSSCCHHHHHHHHHHHHHHHHHH
T ss_pred             ---------CCeEEEEEEEEec-------------CCEEEEEEe-cCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHH
Confidence                     4999999998875             557999999 55676655553   488999999999999999999


Q ss_pred             HhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecC-------CcEEEeecCCCccccC
Q psy9184         413 EVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVG-------EKICYYDLSQDEELFE  485 (562)
Q Consensus       413 H~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~-------~g~v~~~l~~~pelF~  485 (562)
                      |+ .+|+||||||+|||++. +                    .+||+|||+|+....       ...+++..|++||++.
T Consensus       172 H~-~~ivHrDlkp~NIll~~-~--------------------~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~  229 (390)
T 2zmd_A          172 HQ-HGIVHSDLKPANFLIVD-G--------------------MLKLIDFGIANQMQPDTTSVVKDSQVGAVNYMPPEAIK  229 (390)
T ss_dssp             HT-TTCCCCCCCGGGEEESS-S--------------------CEEECCCSSSCCC---------CCSCCCGGGCCHHHHH
T ss_pred             HH-CCeeecCCCHHHEEEEC-C--------------------eEEEEecCccccccCCCccccCCCCCcCCCccChHHhh
Confidence            99 79999999999999954 3                    699999999987643       2335688899999986


Q ss_pred             C------------CCCcHHHHHHHhhcccCCCCCCCCCCChhh-hHHHHHHHHhhcccCCCCCCCchhHHHHHHHHHHHh
Q psy9184         486 G------------EGDYQFDMYRMMRKQCQNNWQNFTPKNNVF-WIHYLVDKATCLKKGYQYLRAPRHQAFELLEELGQN  552 (562)
Q Consensus       486 g------------~~~~q~dIy~lm~~~~~~~W~~~~P~tn~~-wl~yl~~~Ll~~~~~~~~~~~~~~~~~~~l~~l~~~  552 (562)
                      +            ..+...|||++.-... ..+.+..|+.... ....+ ..++.....+..+...    -..+.+|...
T Consensus       230 ~~~~~~~~~~~~~~~~~~~DiwSlGvil~-ell~G~~Pf~~~~~~~~~~-~~~~~~~~~~~~~~~~----~~~~~~li~~  303 (390)
T 2zmd_A          230 DMSSSRENGKSKSKISPKSDVWSLGCILY-YMTYGKTPFQQIINQISKL-HAIIDPNHEIEFPDIP----EKDLQDVLKC  303 (390)
T ss_dssp             CC------------CCHHHHHHHHHHHHH-HHHHSSCTTTTCCCHHHHH-HHHHCTTSCCCCCCCS----CHHHHHHHHH
T ss_pred             hccccccccccccCCCChhhHHHHHHHHH-HHHHCCCcchhhhHHHHHH-HHHhCccccCCCCccc----hHHHHHHHHH
Confidence            5            3556699988643332 3334444443211 11111 2222211222211111    2356677788


Q ss_pred             cCCCcCcCC
Q psy9184         553 ALHFDSCYE  561 (562)
Q Consensus       553 ~l~~~s~~~  561 (562)
                      +|..+...|
T Consensus       304 ~L~~dP~~R  312 (390)
T 2zmd_A          304 CLKRDPKQR  312 (390)
T ss_dssp             HTCSSTTTS
T ss_pred             HcccChhhC
Confidence            888777655

>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C

Probab=99.94  E-value=8.8e-27  Score=247.80  Aligned_cols=233  Identities=14%  Similarity=0.180  Sum_probs=159.6

Q ss_pred             CCCcee-eeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCcccc
Q psy9184         261 SALKNC-KKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTE  333 (562)
Q Consensus       261 ~~y~~~-~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~  333 (562)
                      ++|.+. +.||+|+||.||+|      +.||||++...             ..+.+|+.++.++.+              
T Consensus        61 ~~y~~~~~~LG~G~~g~V~~~~~~~~~~~vAiK~~~~~-------------~~~~~E~~~~~~~~~--------------  113 (400)
T 1nxk_A           61 DDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC-------------PKARREVELHWRASQ--------------  113 (400)
T ss_dssp             GTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECS-------------HHHHHHHHHHHHHTT--------------
T ss_pred             ccceeccceeeeccCeEEEEEEECCCCCEEEEEEeCcc-------------hhHHHHHHHHHHhcC--------------
Confidence            456766 78999999999999      78999999743             245688888866544              


Q ss_pred             cccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc-----cCCHHHHHHHHHHHHHH
Q psy9184         334 LLKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK-----YRSPNQTYAMILQVVFS  408 (562)
Q Consensus       334 l~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~-----~l~e~~i~~I~~QIl~a  408 (562)
                                 ||||++++++|....         .....+|+|||||.||++.+.+.     .+++.+++.|+.||+.|
T Consensus       114 -----------hp~iv~l~~~~~~~~---------~~~~~~~lv~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~a  173 (400)
T 1nxk_A          114 -----------CPHIVRIVDVYENLY---------AGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEA  173 (400)
T ss_dssp             -----------STTBCCEEEEEEEEE---------TTEEEEEEEEECCCSEEHHHHHHCC---CCBHHHHHHHHHHHHHH
T ss_pred             -----------CCCcceEeEEEeecc---------cCCcEEEEEEEeCCCCcHHHHHHHhCCCCCCHHHHHHHHHHHHHH
Confidence                       499999999886411         01347899999999998877764     28999999999999999


Q ss_pred             HHHHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecC----CcEEEeecCCCcccc
Q psy9184         409 LAVAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVG----EKICYYDLSQDEELF  484 (562)
Q Consensus       409 L~yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~----~g~v~~~l~~~pelF  484 (562)
                      |.|||+ +||+||||||+|||++..+..                 ..+||+|||+|+....    ...+++..|++||++
T Consensus       174 L~~LH~-~~ivHrDlkp~Nill~~~~~~-----------------~~~kl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~  235 (400)
T 1nxk_A          174 IQYLHS-INIAHRDVKPENLLYTSKRPN-----------------AILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVL  235 (400)
T ss_dssp             HHHHHH-TTEECCCCCGGGEEESSSSTT-----------------CCEEECCCTTCEECC-----------CTTCCGGGS
T ss_pred             HHHHHH-CCccccCcCcceEEEecCCCC-----------------ccEEEEecccccccCCCCccccCCCCCCccCHhhc
Confidence            999999 799999999999999974210                 1799999999987654    344568889999998


Q ss_pred             CC-CCCcHHHHHHHhhcccCCCCCCCCCCChhh---hHHHHHHHHhhcccCCCCCCCchhHHHHHHHHHHHhcCCCcCcC
Q psy9184         485 EG-EGDYQFDMYRMMRKQCQNNWQNFTPKNNVF---WIHYLVDKATCLKKGYQYLRAPRHQAFELLEELGQNALHFDSCY  560 (562)
Q Consensus       485 ~g-~~~~q~dIy~lm~~~~~~~W~~~~P~tn~~---wl~yl~~~Ll~~~~~~~~~~~~~~~~~~~l~~l~~~~l~~~s~~  560 (562)
                      .+ ..+...|||++.-... ....+..|+....   ....+...+......++...  ....-..+..|.+.||+.+...
T Consensus       236 ~~~~~~~~~DiwslG~il~-ell~g~~pf~~~~~~~~~~~~~~~i~~~~~~~~~~~--~~~~s~~~~~li~~~L~~dP~~  312 (400)
T 1nxk_A          236 GPEKYDKSCDMWSLGVIMY-ILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPE--WSEVSEEVKMLIRNLLKTEPTQ  312 (400)
T ss_dssp             CCCCSSSHHHHHHHHHHHH-HHHHSSCSCCCCTTCSSCCSHHHHHHHTCCCCCTTT--TTTSCHHHHHHHHTTSCSSGGG
T ss_pred             CCCCCCCcccHHHHHHHHH-HHHhCCCCCCCCccccccHHHHHHHHcCcccCCCcc--cccCCHHHHHHHHHHCCCChhH
Confidence            76 4566799988643332 2223333331110   00001122222122233211  1112346788899999988776


Q ss_pred             C
Q psy9184         561 E  561 (562)
Q Consensus       561 ~  561 (562)
                      |
T Consensus       313 R  313 (400)
T 1nxk_A          313 R  313 (400)
T ss_dssp             S
T ss_pred             C
Confidence            5

>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*

Probab=99.94  E-value=1.4e-26  Score=248.42  Aligned_cols=178  Identities=19%  Similarity=0.271  Sum_probs=143.2

Q ss_pred             CCCCCceeeeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCccc
Q psy9184         259 PSSALKNCKKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFT  332 (562)
Q Consensus       259 ~~~~y~~~~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv  332 (562)
                      -.++|++.+.||+|+||.||+|      +.||||++....      ........+.+|+.+|+.++|             
T Consensus        24 i~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~------~~~~~~~~~~~E~~~l~~l~h-------------   84 (432)
T 3n9x_A           24 VPDNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMF------EDLIDCKRILREITILNRLKS-------------   84 (432)
T ss_dssp             CCTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSTT------TSHHHHHHHHHHHHHHHHCCC-------------
T ss_pred             ecCCEEEEEEEeecCCEEEEEEEECCCCcEEEEEEeCchh------cChHHHHHHHHHHHHHHHcCC-------------
Confidence            4578999999999999999999      789999997542      234455788999999999998             


Q ss_pred             ccccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc---cCCHHHHHHHHHHHHHHH
Q psy9184         333 ELLKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK---YRSPNQTYAMILQVVFSL  409 (562)
Q Consensus       333 ~l~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~---~l~e~~i~~I~~QIl~aL  409 (562)
                                   |||+++++++...        .......+|+||||+. |++.+.+.   .+++..++.++.||+.||
T Consensus        85 -------------~nIv~l~~~~~~~--------~~~~~~~~~lv~e~~~-~~L~~~~~~~~~l~~~~~~~i~~qil~aL  142 (432)
T 3n9x_A           85 -------------DYIIRLYDLIIPD--------DLLKFDELYIVLEIAD-SDLKKLFKTPIFLTEEHIKTILYNLLLGE  142 (432)
T ss_dssp             -------------TTBCCEEEECCCS--------CTTTCCCEEEEEECCS-EEHHHHHHSSCCCCHHHHHHHHHHHHHHH
T ss_pred             -------------CCcceEEEEEecC--------CCCcCCeEEEEEecCC-cCHHHHHhccCCCCHHHHHHHHHHHHHHH
Confidence                         9999999888652        1122357999999997 45655554   389999999999999999


Q ss_pred             HHHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecC--------------------
Q psy9184         410 AVAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVG--------------------  469 (562)
Q Consensus       410 ~yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~--------------------  469 (562)
                      .|||+ .||+||||||+|||++.++                    .+||+|||+|+....                    
T Consensus       143 ~~LH~-~givHrDlkp~NILl~~~~--------------------~~kL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~  201 (432)
T 3n9x_A          143 NFIHE-SGIIHRDLKPANCLLNQDC--------------------SVKVCDFGLARTINSEKDTNIVNDLEENEEPGPHN  201 (432)
T ss_dssp             HHHHH-TTEECCCCCGGGEEECTTC--------------------CEEECCCTTCEEC----------------------
T ss_pred             HHHHH-CCCCCCCCCHHHeEECCCC--------------------CEEEccCCCcccccccccccccccccccccccccc
Confidence            99999 7999999999999999886                    799999999997643                    


Q ss_pred             -------CcEEEeecCCCccccCC--CCCcHHHHHHHh
Q psy9184         470 -------EKICYYDLSQDEELFEG--EGDYQFDMYRMM  498 (562)
Q Consensus       470 -------~g~v~~~l~~~pelF~g--~~~~q~dIy~lm  498 (562)
                             ...+++..|++||++.+  ......|||++.
T Consensus       202 ~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~DiwSlG  239 (432)
T 3n9x_A          202 KNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTG  239 (432)
T ss_dssp             ---------CCCCCTTCCHHHHTTCSCCCTHHHHHHHH
T ss_pred             cchhccccCCCCCccccCHHHHhcCCCCCcccccchHH
Confidence                   22345778999997633  456678998863

>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*

Probab=99.94  E-value=2.2e-27  Score=247.75  Aligned_cols=229  Identities=16%  Similarity=0.187  Sum_probs=167.6

Q ss_pred             CCCceeeeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCccccc
Q psy9184         261 SALKNCKKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTEL  334 (562)
Q Consensus       261 ~~y~~~~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~l  334 (562)
                      ..|+..+.||+|+||.||+|      +.||||++....     .......+.+.+|+.+++.++|               
T Consensus        54 ~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~-----~~~~~~~~~~~~E~~~l~~l~h---------------  113 (348)
T 1u5q_A           54 KLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSG-----KQSNEKWQDIIKEVRFLQKLRH---------------  113 (348)
T ss_dssp             HHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEESCS-----SCHHHHHHHHHHHHHHHHHCCC---------------
T ss_pred             hheeeeeEEccCCCEEEEEEEEccCCeEEEEEEEcccc-----ccchHHHHHHHHHHHHHHhCCC---------------
Confidence            45889999999999999999      789999998653     2234556788999999999998               


Q ss_pred             ccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc----cCCHHHHHHHHHHHHHHHH
Q psy9184         335 LKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK----YRSPNQTYAMILQVVFSLA  410 (562)
Q Consensus       335 ~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~----~l~e~~i~~I~~QIl~aL~  410 (562)
                                 |||++++++|..             ++..|+||||+. |++.+.+.    .+++.+++.++.||+.||.
T Consensus       114 -----------pniv~~~~~~~~-------------~~~~~lv~e~~~-g~l~~~l~~~~~~l~~~~~~~i~~qi~~aL~  168 (348)
T 1u5q_A          114 -----------PNTIQYRGCYLR-------------EHTAWLVMEYCL-GSASDLLEVHKKPLQEVEIAAVTHGALQGLA  168 (348)
T ss_dssp             -----------TTBCCEEEEEEE-------------TTEEEEEEECCS-EEHHHHHHHHTSCCCHHHHHHHHHHHHHHHH
T ss_pred             -----------CCEeeEEEEEEE-------------CCeEEEEEecCC-CCHHHHHHHhcCCCCHHHHHHHHHHHHHHHH
Confidence                       999999998875             558999999998 55655542    4899999999999999999


Q ss_pred             HHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecC-CcEEEeecCCCccccC----
Q psy9184         411 VAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVG-EKICYYDLSQDEELFE----  485 (562)
Q Consensus       411 yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~-~g~v~~~l~~~pelF~----  485 (562)
                      |||+ .||+||||||+|||++.++                    .+||+|||+++.... ....++..|++||++.    
T Consensus       169 ~LH~-~~ivH~Dlkp~NIll~~~~--------------------~~kL~DfG~a~~~~~~~~~~gt~~y~aPE~~~~~~~  227 (348)
T 1u5q_A          169 YLHS-HNMIHRDVKAGNILLSEPG--------------------LVKLGDFGSASIMAPANSFVGTPYWMAPEVILAMDE  227 (348)
T ss_dssp             HHHH-TTCBCCCCSGGGEEEETTT--------------------EEEECCCTTCBSSSSBCCCCSCGGGCCHHHHHTTSS
T ss_pred             HHHh-CCeeeCCCCHHHEEECCCC--------------------CEEEeeccCceecCCCCcccCCcceeCHhhhccccC
Confidence            9999 7999999999999999876                    799999999987654 3345678899999884    


Q ss_pred             CCCCcHHHHHHHhhcccCCCCCCCCCCChhhhHHHHHHHHhhcccCCCCCCCchhHHHHHHHHHHHhcCCCcCcCC
Q psy9184         486 GEGDYQFDMYRMMRKQCQNNWQNFTPKNNVFWIHYLVDKATCLKKGYQYLRAPRHQAFELLEELGQNALHFDSCYE  561 (562)
Q Consensus       486 g~~~~q~dIy~lm~~~~~~~W~~~~P~tn~~wl~yl~~~Ll~~~~~~~~~~~~~~~~~~~l~~l~~~~l~~~s~~~  561 (562)
                      +..+...|||++.-... ....+..|+.+......+.. +.. .........   ..-..+.+|...+|..+...|
T Consensus       228 ~~~~~~~DiwslG~il~-ell~g~~p~~~~~~~~~~~~-~~~-~~~~~~~~~---~~~~~l~~li~~~l~~dP~~R  297 (348)
T 1u5q_A          228 GQYDGKVDVWSLGITCI-ELAERKPPLFNMNAMSALYH-IAQ-NESPALQSG---HWSEYFRNFVDSCLQKIPQDR  297 (348)
T ss_dssp             CCBCTHHHHHHHHHHHH-HHHHSSCTTTTSCHHHHHHH-HHH-SCCCCCCCT---TSCHHHHHHHHHHTCSSGGGS
T ss_pred             CCCCcHHHHHHHHHHHH-HHHhCCCCCCCCChHHHHHH-HHh-cCCCCCCCC---CCCHHHHHHHHHHcccChhhC
Confidence            34566799988644332 33334444433222222222 222 111111111   113456777888888776654

>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}

Probab=99.94  E-value=1e-26  Score=241.56  Aligned_cols=207  Identities=17%  Similarity=0.169  Sum_probs=149.9

Q ss_pred             CCCCceeeeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCcccc
Q psy9184         260 SSALKNCKKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTE  333 (562)
Q Consensus       260 ~~~y~~~~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~  333 (562)
                      .++|++.++||+|+||.||+|      +.||||++...         ......+..|+.+++.+.+.             
T Consensus        34 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~---------~~~~~~~~~e~~~l~~l~~~-------------   91 (360)
T 3llt_A           34 NNAFLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRNI---------KKYTRSAKIEADILKKIQND-------------   91 (360)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSC---------HHHHHHHHHHHHHHHHTCCC-------------
T ss_pred             cCEEEEEEEEcccCCeEEEEEEECCCCeEEEEEEeccc---------hhhhhhhHHHHHHHHHhccc-------------
Confidence            378999999999999999999      78999999743         23345677899999999841             


Q ss_pred             cccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc-----cCCHHHHHHHHHHHHHH
Q psy9184         334 LLKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK-----YRSPNQTYAMILQVVFS  408 (562)
Q Consensus       334 l~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~-----~l~e~~i~~I~~QIl~a  408 (562)
                              ...||||++++++|..             .+.+|+||||+ +|++.+.+.     .+++.+++.++.||+.|
T Consensus        92 --------~~~h~~iv~~~~~~~~-------------~~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~a  149 (360)
T 3llt_A           92 --------DINNNNIVKYHGKFMY-------------YDHMCLIFEPL-GPSLYEIITRNNYNGFHIEDIKLYCIEILKA  149 (360)
T ss_dssp             --------STTGGGBCCEEEEEEE-------------TTEEEEEECCC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHH
T ss_pred             --------CCCCCCeecccceeeE-------------CCeeEEEEcCC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHH
Confidence                    1114999999998875             45899999999 787766654     28899999999999999


Q ss_pred             HHHHHhhCCeEeccCCCCCEEEccCCCCCccc----ccCCccc-ccccCCceEEEEeccceeeecC--CcEEEeecCCCc
Q psy9184         409 LAVAEVELEFEHRDLHMSNILVLQTDQDESSF----TLDDTHY-AMKTAGVQVTIIDFTISRCFVG--EKICYYDLSQDE  481 (562)
Q Consensus       409 L~yLH~~~~IiHRDLKpeNILl~~~~~~~~~~----~~~~~~~-~~~~~g~~vKL~DFGLSr~~~~--~g~v~~~l~~~p  481 (562)
                      |.|||+ .||+||||||+|||++.........    ..++... ........+||+|||+|+....  ....++..|++|
T Consensus       150 L~~LH~-~~ivHrDlkp~NIll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DFG~a~~~~~~~~~~~gt~~y~aP  228 (360)
T 3llt_A          150 LNYLRK-MSLTHTDLKPENILLDDPYFEKSLITVRRVTDGKKIQIYRTKSTGIKLIDFGCATFKSDYHGSIINTRQYRAP  228 (360)
T ss_dssp             HHHHHH-TTEECSCCSGGGEEESCTTCCEEEEEEECTTTCCEEEEEEESCCCEEECCCTTCEETTSCCCSCCSCGGGCCH
T ss_pred             HHHHHH-CCeeeCCCCcccEEEccccccccccchhcccccccccccccCCCCEEEEeccCceecCCCCcCccCcccccCc
Confidence            999999 7999999999999998632100000    0000000 0011223799999999987654  334557889999


Q ss_pred             cccCC-CCCcHHHHHHHhhcccCCCCCCCCCC
Q psy9184         482 ELFEG-EGDYQFDMYRMMRKQCQNNWQNFTPK  512 (562)
Q Consensus       482 elF~g-~~~~q~dIy~lm~~~~~~~W~~~~P~  512 (562)
                      |++.+ ..+...|||++.-... ..+.+..|+
T Consensus       229 E~~~~~~~~~~~DiwslG~il~-ell~g~~pf  259 (360)
T 3llt_A          229 EVILNLGWDVSSDMWSFGCVLA-ELYTGSLLF  259 (360)
T ss_dssp             HHHTTCCCCTTHHHHHHHHHHH-HHHHSSCSC
T ss_pred             HHHcCCCCCCccchHHHHHHHH-HHHHCCCCC
Confidence            98877 4566799988644332 233333444

>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*

Probab=99.94  E-value=3e-27  Score=234.93  Aligned_cols=173  Identities=23%  Similarity=0.262  Sum_probs=143.4

Q ss_pred             CCCCCceeeeeeccCceEEEEE-----eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCcccc
Q psy9184         259 PSSALKNCKKIGEGVYGEVFKL-----NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTE  333 (562)
Q Consensus       259 ~~~~y~~~~~LG~GsfG~Vyka-----~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~  333 (562)
                      ..++|++.+.||+|+||.||+|     ..||+|++.....         ..+.+.+|+.+++.++|              
T Consensus         6 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~---------~~~~~~~E~~~l~~l~h--------------   62 (268)
T 3sxs_A            6 KREEITLLKELGSGQFGVVKLGKWKGQYDVAVKMIKEGSM---------SEDEFFQEAQTMMKLSH--------------   62 (268)
T ss_dssp             CGGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECBTTB---------CHHHHHHHHHHHHHCCC--------------
T ss_pred             chhheeeeeeeccCCCceEEEEEecCceeEEEEEeccCCC---------cHHHHHHHHHHHHhCCC--------------
Confidence            3467999999999999999999     6899999986531         12467899999999998              


Q ss_pred             cccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc----cCCHHHHHHHHHHHHHHH
Q psy9184         334 LLKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK----YRSPNQTYAMILQVVFSL  409 (562)
Q Consensus       334 l~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~----~l~e~~i~~I~~QIl~aL  409 (562)
                                  |||+++++++.+             ++..|+||||+++|++.+.+.    .+++.+++.++.||+.||
T Consensus        63 ------------~~i~~~~~~~~~-------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l  117 (268)
T 3sxs_A           63 ------------PKLVKFYGVCSK-------------EYPIYIVTEYISNGCLLNYLRSHGKGLEPSQLLEMCYDVCEGM  117 (268)
T ss_dssp             ------------TTBCCEEEEECS-------------SSSEEEEEECCTTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHH
T ss_pred             ------------CCEeeEEEEEcc-------------CCceEEEEEccCCCcHHHHHHHcCCCCCHHHHHHHHHHHHHHH
Confidence                        999999998865             557999999999998776664    389999999999999999


Q ss_pred             HHHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecCCc------EEEeecCCCccc
Q psy9184         410 AVAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVGEK------ICYYDLSQDEEL  483 (562)
Q Consensus       410 ~yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~~g------~v~~~l~~~pel  483 (562)
                      .|||+ .||+||||||+|||++.++                    .++|+|||+++......      ..++..|++||+
T Consensus       118 ~~lH~-~~i~H~dikp~Nil~~~~~--------------------~~~l~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~  176 (268)
T 3sxs_A          118 AFLES-HQFIHRDLAARNCLVDRDL--------------------CVKVSDFGMTRYVLDDQYVSSVGTKFPVKWSAPEV  176 (268)
T ss_dssp             HHHHH-TTEEESSCSGGGEEECTTC--------------------CEEECCTTCEEECCTTCEEECCSCCCCGGGCCHHH
T ss_pred             HHHHH-CCeecCCcCcceEEECCCC--------------------CEEEccCccceecchhhhhcccCCCcCcccCCHHH
Confidence            99999 7999999999999998886                    79999999998765432      223445889998


Q ss_pred             cCC-CCCcHHHHHHHhhc
Q psy9184         484 FEG-EGDYQFDMYRMMRK  500 (562)
Q Consensus       484 F~g-~~~~q~dIy~lm~~  500 (562)
                      +.+ ..+...|||++.-.
T Consensus       177 ~~~~~~~~~~Di~slG~i  194 (268)
T 3sxs_A          177 FHYFKYSSKSDVWAFGIL  194 (268)
T ss_dssp             HHHSEEETTHHHHHHHHH
T ss_pred             HhccCCchhhhhHHHHHH
Confidence            876 34556899886433

>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}

Probab=99.94  E-value=6.6e-27  Score=244.19  Aligned_cols=185  Identities=14%  Similarity=0.179  Sum_probs=143.9

Q ss_pred             CCCCCceeeeeeccCceEEEEE-----------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCC
Q psy9184         259 PSSALKNCKKIGEGVYGEVFKL-----------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENS  327 (562)
Q Consensus       259 ~~~~y~~~~~LG~GsfG~Vyka-----------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~  327 (562)
                      ...+|.+.++||+|+||.||+|           +.||||++....           ...+..|+.+++.+.+..      
T Consensus        63 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~-----------~~~~~~e~~~~~~l~~~~------  125 (365)
T 3e7e_A           63 GSKLVYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPAN-----------PWEFYIGTQLMERLKPSM------  125 (365)
T ss_dssp             SSSEEEEEEEEEECSSEEEEEEEC-------CCCCEEEEEESSCC-----------HHHHHHHHHHHHHSCGGG------
T ss_pred             CCEEEEEEEEeeccCCEEEEEEEecCCcccccCcEEEEEEeCCCC-----------hhHHHHHHHHHHHhhhhh------
Confidence            3467999999999999999999           689999997542           235678888888887421      


Q ss_pred             CCcccccccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc--------cCCHHHHH
Q psy9184         328 TPCFTELLKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK--------YRSPNQTY  399 (562)
Q Consensus       328 ~p~fv~l~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~--------~l~e~~i~  399 (562)
                                       |+||+.+++.+..             ++..|+|||||+||++.+.+.        .+++.+++
T Consensus       126 -----------------~~~iv~~~~~~~~-------------~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~  175 (365)
T 3e7e_A          126 -----------------QHMFMKFYSAHLF-------------QNGSVLVGELYSYGTLLNAINLYKNTPEKVMPQGLVI  175 (365)
T ss_dssp             -----------------GGGBCCEEEEEEC-------------SSCEEEEECCCCSCBHHHHHHHHHTSTTCSCCHHHHH
T ss_pred             -----------------hhhhhhhheeeec-------------CCCcEEEEeccCCCcHHHHHHHhhcccccCCCHHHHH
Confidence                             4899999988875             558899999999998877763        38999999


Q ss_pred             HHHHHHHHHHHHHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecC-------CcE
Q psy9184         400 AMILQVVFSLAVAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVG-------EKI  472 (562)
Q Consensus       400 ~I~~QIl~aL~yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~-------~g~  472 (562)
                      .|+.||+.||+|||+ +||+||||||+|||++.......         ........+||+|||+|+....       ...
T Consensus       176 ~i~~qi~~~L~~lH~-~~ivHrDiKp~NIll~~~~~~~~---------~~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~~  245 (365)
T 3e7e_A          176 SFAMRMLYMIEQVHD-CEIIHGDIKPDNFILGNGFLEQD---------DEDDLSAGLALIDLGQSIDMKLFPKGTIFTAK  245 (365)
T ss_dssp             HHHHHHHHHHHHHHT-TTEECCCCSGGGEEECGGGTCC---------------CTTEEECCCTTCEEGGGSCTTEEECCS
T ss_pred             HHHHHHHHHHHHHhh-CCeecCCCCHHHEEecccccCcc---------ccccccCCEEEeeCchhhhhhccCCCceeeee
Confidence            999999999999999 79999999999999987210000         0000012799999999986541       223


Q ss_pred             EEeecCCCccccCCC-CCcHHHHHHHhhc
Q psy9184         473 CYYDLSQDEELFEGE-GDYQFDMYRMMRK  500 (562)
Q Consensus       473 v~~~l~~~pelF~g~-~~~q~dIy~lm~~  500 (562)
                      +++..|++||++.+. .+.+.|||++.-.
T Consensus       246 ~gt~~y~aPE~~~~~~~~~~~DiwslG~i  274 (365)
T 3e7e_A          246 CETSGFQCVEMLSNKPWNYQIDYFGVAAT  274 (365)
T ss_dssp             SCTTSCCCHHHHTTCCBSTHHHHHHHHHH
T ss_pred             cCCCCCCChHHhcCCCCCccccHHHHHHH
Confidence            457889999999885 4777999986433

>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=99.94  E-value=2.9e-27  Score=235.57  Aligned_cols=173  Identities=21%  Similarity=0.236  Sum_probs=143.6

Q ss_pred             CCCCCceeeeeeccCceEEEEE-----eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCcccc
Q psy9184         259 PSSALKNCKKIGEGVYGEVFKL-----NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTE  333 (562)
Q Consensus       259 ~~~~y~~~~~LG~GsfG~Vyka-----~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~  333 (562)
                      ..++|++.+.||+|+||.||+|     ..||+|++.....         ..+.+.+|+.+++.++|              
T Consensus         8 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~---------~~~~~~~E~~~l~~l~h--------------   64 (269)
T 4hcu_A            8 DPSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAM---------SEEDFIEEAEVMMKLSH--------------   64 (269)
T ss_dssp             CGGGEEEEEEEEECSSCEEEEEEETTTEEEEEEEECTTSB---------CHHHHHHHHHHHHTCCC--------------
T ss_pred             ChhhceeeheecCCCccEEEEEEecCCCeEEEEEeccccc---------CHHHHHHHHHHHHhCCC--------------
Confidence            3467999999999999999999     7899999986531         12467899999999998              


Q ss_pred             cccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc----cCCHHHHHHHHHHHHHHH
Q psy9184         334 LLKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK----YRSPNQTYAMILQVVFSL  409 (562)
Q Consensus       334 l~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~----~l~e~~i~~I~~QIl~aL  409 (562)
                                  |||+++++++.+             ++..|+||||+++|++.+.+.    .+++..++.++.||+.||
T Consensus        65 ------------~~i~~~~~~~~~-------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l  119 (269)
T 4hcu_A           65 ------------PKLVQLYGVCLE-------------QAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGM  119 (269)
T ss_dssp             ------------TTBCCEEEEECS-------------SSSEEEEEECCTTCBHHHHHHTTTTCCCHHHHHHHHHHHHHHH
T ss_pred             ------------CCEeeEEEEEec-------------CCceEEEEEeCCCCcHHHHHHhcCcccCHHHHHHHHHHHHHHH
Confidence                        999999998875             457999999999998776663    389999999999999999


Q ss_pred             HHHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecC------CcEEEeecCCCccc
Q psy9184         410 AVAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVG------EKICYYDLSQDEEL  483 (562)
Q Consensus       410 ~yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~------~g~v~~~l~~~pel  483 (562)
                      .|||+ .||+||||||+|||++.++                    .++|+|||+++....      .+..++..|++||+
T Consensus       120 ~~lH~-~~i~H~dikp~Nil~~~~~--------------------~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~  178 (269)
T 4hcu_A          120 AYLEE-ACVIHRDLAARNCLVGENQ--------------------VIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEV  178 (269)
T ss_dssp             HHHHH-TTCCCSCCCGGGEEECGGG--------------------CEEECCTTGGGGBCCHHHHSTTSTTCCGGGCCHHH
T ss_pred             HHHHh-CCeecCCcchheEEEcCCC--------------------CEEeccccccccccccccccccCcccccccCCHHH
Confidence            99999 7999999999999998776                    799999999986543      23333556899998


Q ss_pred             cCC-CCCcHHHHHHHhhc
Q psy9184         484 FEG-EGDYQFDMYRMMRK  500 (562)
Q Consensus       484 F~g-~~~~q~dIy~lm~~  500 (562)
                      +.+ ..+...|||++.-.
T Consensus       179 ~~~~~~~~~~Di~slG~~  196 (269)
T 4hcu_A          179 FSFSRYSSKSDVWSFGVL  196 (269)
T ss_dssp             HHHCCCCHHHHHHHHHHH
T ss_pred             hcCCCCCchhhhHHHHHH
Confidence            875 45667999886433

>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}

Probab=99.94  E-value=1.2e-26  Score=235.51  Aligned_cols=174  Identities=21%  Similarity=0.266  Sum_probs=141.5

Q ss_pred             CCCceeeeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCccccc
Q psy9184         261 SALKNCKKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTEL  334 (562)
Q Consensus       261 ~~y~~~~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~l  334 (562)
                      ++|++.++||+|+||.||+|      +.||+|++....      ......+.+.+|+.+++.++|               
T Consensus         3 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~------~~~~~~~~~~~E~~~l~~l~h---------------   61 (311)
T 4agu_A            3 EKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESE------DDPVIKKIALREIRMLKQLKH---------------   61 (311)
T ss_dssp             CCEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCCC------C-HHHHHHHHHHHHHHHHCCC---------------
T ss_pred             ccceEeeEEeecCCeEEEEEEeCCCCcEEEEEEeeccc------cchHHHHHHHHHHHHHHhCCC---------------
Confidence            57999999999999999999      789999987653      223445678899999999998               


Q ss_pred             ccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc---cCCHHHHHHHHHHHHHHHHH
Q psy9184         335 LKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK---YRSPNQTYAMILQVVFSLAV  411 (562)
Q Consensus       335 ~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~---~l~e~~i~~I~~QIl~aL~y  411 (562)
                                 |||+++++++..             .+..|+||||+.+|++...+.   .+++..+..++.||+.||.|
T Consensus        62 -----------~~i~~~~~~~~~-------------~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~i~~~l~~~l~~  117 (311)
T 4agu_A           62 -----------PNLVNLLEVFRR-------------KRRLHLVFEYCDHTVLHELDRYQRGVPEHLVKSITWQTLQAVNF  117 (311)
T ss_dssp             -----------TTBCCEEEEEEE-------------TTEEEEEEECCSEEHHHHHHHTSSCCCHHHHHHHHHHHHHHHHH
T ss_pred             -----------CCccchhheeec-------------CCeEEEEEEeCCCchHHHHHhhhcCCCHHHHHHHHHHHHHHHHH
Confidence                       999999999875             558999999999875544332   38999999999999999999


Q ss_pred             HHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecC-----CcEEEeecCCCccccCC
Q psy9184         412 AEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVG-----EKICYYDLSQDEELFEG  486 (562)
Q Consensus       412 LH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~-----~g~v~~~l~~~pelF~g  486 (562)
                      ||+ .||+||||||+|||++.++                    .+||+|||+|+....     .....+..|++||++.+
T Consensus       118 lH~-~~ivH~dlkp~Nil~~~~~--------------------~~kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~  176 (311)
T 4agu_A          118 CHK-HNCIHRDVKPENILITKHS--------------------VIKLCDFGFARLLTGPSDYYDDEVATRWYRSPELLVG  176 (311)
T ss_dssp             HHH-TTEECCCCSGGGEEECTTS--------------------CEEECCCTTCEECC------------GGGCCHHHHHT
T ss_pred             HHH-CCCcCCCCChhhEEEcCCC--------------------CEEEeeCCCchhccCcccccCCCcCCccccChHHHhc
Confidence            999 7999999999999998876                    799999999987653     23456778999998876


Q ss_pred             --CCCcHHHHHHHhhc
Q psy9184         487 --EGDYQFDMYRMMRK  500 (562)
Q Consensus       487 --~~~~q~dIy~lm~~  500 (562)
                        ..+...|||++.-.
T Consensus       177 ~~~~~~~~Di~slG~i  192 (311)
T 4agu_A          177 DTQYGPPVDVWAIGCV  192 (311)
T ss_dssp             CSCCCTHHHHHHHHHH
T ss_pred             CCCCCcchhhHHHHHH
Confidence              34667999886443

>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}

Probab=99.94  E-value=6.1e-27  Score=246.63  Aligned_cols=174  Identities=20%  Similarity=0.279  Sum_probs=144.2

Q ss_pred             CCCCCceeeeeeccCceEEEEE-------------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhc-CCccccC
Q psy9184         259 PSSALKNCKKIGEGVYGEVFKL-------------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKET-SDLQYRT  324 (562)
Q Consensus       259 ~~~~y~~~~~LG~GsfG~Vyka-------------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L-~h~~~~~  324 (562)
                      +.++|.+.++||+|+||.||+|             ..||+|++....       .......+.+|+.+++.+ +|     
T Consensus        67 ~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~-------~~~~~~~~~~E~~~l~~l~~h-----  134 (382)
T 3tt0_A           67 PRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDA-------TEKDLSDLISEMEMMKMIGKH-----  134 (382)
T ss_dssp             CGGGEEEEEEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTTC-------CHHHHHHHHHHHHHHHHHCCC-----
T ss_pred             chhheEeeeEEecCCCeEEEEEEEccccccccccceEEEEEeecccc-------CHHHHHHHHHHHHHHHHhcCC-----
Confidence            4478999999999999999999             259999998643       244557889999999999 66     


Q ss_pred             CCCCCcccccccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc-------------
Q psy9184         325 ENSTPCFTELLKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK-------------  391 (562)
Q Consensus       325 ~n~~p~fv~l~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~-------------  391 (562)
                                           |||+++++++..             ++.+|+||||+.+|++.+.+.             
T Consensus       135 ---------------------pnIv~~~~~~~~-------------~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~  180 (382)
T 3tt0_A          135 ---------------------KNIINLLGACTQ-------------DGPLYVIVEYASKGNLREYLQARRPPGLEYSYNP  180 (382)
T ss_dssp             ---------------------TTBCCEEEEECS-------------SSSCEEEEECCTTCBHHHHHHHTCCSSSSSCCCC
T ss_pred             ---------------------chhhhheeeecc-------------CCceEEEEEecCCCcHHHHHHHhccccccccccc
Confidence                                 999999999875             457899999999998866553             


Q ss_pred             ------cCCHHHHHHHHHHHHHHHHHHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEecccee
Q psy9184         392 ------YRSPNQTYAMILQVVFSLAVAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISR  465 (562)
Q Consensus       392 ------~l~e~~i~~I~~QIl~aL~yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr  465 (562)
                            .+++.+++.++.||+.||.|||+ .||+||||||+|||++.++                    .+||+|||+|+
T Consensus       181 ~~~~~~~l~~~~~~~i~~qi~~aL~~LH~-~~ivH~Dlkp~NIll~~~~--------------------~~kL~DFG~a~  239 (382)
T 3tt0_A          181 SHNPEEQLSSKDLVSCAYQVARGMEYLAS-KKCIHRDLAARNVLVTEDN--------------------VMKIADFGLAR  239 (382)
T ss_dssp             CSSCCCCCCHHHHHHHHHHHHHHHHHHHH-TTCCCSCCCGGGEEECTTC--------------------CEEECSCSCCC
T ss_pred             ccccccccCHHHHHHHHHHHHHHHHHHHh-CCEecCCCCcceEEEcCCC--------------------cEEEcccCccc
Confidence                  28899999999999999999999 7999999999999999886                    79999999998


Q ss_pred             eecC-------CcEEEeecCCCccccCCC-CCcHHHHHHHhh
Q psy9184         466 CFVG-------EKICYYDLSQDEELFEGE-GDYQFDMYRMMR  499 (562)
Q Consensus       466 ~~~~-------~g~v~~~l~~~pelF~g~-~~~q~dIy~lm~  499 (562)
                      ....       ....++..|++||++.+. .+...|||++.-
T Consensus       240 ~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~  281 (382)
T 3tt0_A          240 DIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGV  281 (382)
T ss_dssp             CSSCCCTTCCCTTCCCGGGGSCHHHHHSCCCCHHHHHHHHHH
T ss_pred             ccccccccccccCCCCCcceeCHHHhcCCCCCchhHHHHHHH
Confidence            6543       222335568999987764 566799988543

>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7

Probab=99.94  E-value=2.8e-27  Score=243.23  Aligned_cols=174  Identities=22%  Similarity=0.235  Sum_probs=143.5

Q ss_pred             CCCCCCceeeeeeccCceEEEEE-----------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCC
Q psy9184         258 YPSSALKNCKKIGEGVYGEVFKL-----------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTEN  326 (562)
Q Consensus       258 ~~~~~y~~~~~LG~GsfG~Vyka-----------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n  326 (562)
                      +..++|++.+.||+|+||.||+|           +.||+|+++...       .....+.+.+|+.+++.++|       
T Consensus        44 ~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~-------~~~~~~~~~~E~~~l~~l~h-------  109 (343)
T 1luf_A           44 YPRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEA-------SADMQADFQREAALMAEFDN-------  109 (343)
T ss_dssp             CCGGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTC-------CHHHHHHHHHHHHHHHTCCC-------
T ss_pred             ecHHHCeeeeeeeecCCeeEEEEEecCcCCCCCceeEEEEEecccc-------CHHHHHHHHHHHHHHHhCCC-------
Confidence            34578999999999999999999           369999998643       23445678999999999988       


Q ss_pred             CCCcccccccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCcccc----------------
Q psy9184         327 STPCFTELLKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDI----------------  390 (562)
Q Consensus       327 ~~p~fv~l~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l----------------  390 (562)
                                         |||+++++++.+             ++..|+||||+.+|++.+.+                
T Consensus       110 -------------------p~iv~~~~~~~~-------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~  157 (343)
T 1luf_A          110 -------------------PNIVKLLGVCAV-------------GKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDL  157 (343)
T ss_dssp             -------------------TTBCCEEEEECS-------------SSSCEEEEECCTTCBHHHHHHHTCC-----------
T ss_pred             -------------------CCEEEEEEEEcc-------------CCceEEEEecCCCCcHHHHHHHhCcccccccccccc
Confidence                               999999998865             45789999999999886655                


Q ss_pred             -----------ccCCHHHHHHHHHHHHHHHHHHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEE
Q psy9184         391 -----------KYRSPNQTYAMILQVVFSLAVAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTII  459 (562)
Q Consensus       391 -----------~~l~e~~i~~I~~QIl~aL~yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~  459 (562)
                                 ..+++.+++.++.||+.||.|||+ .||+||||||+|||++.++                    .+||+
T Consensus       158 ~~~~~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~-~~ivH~Dlkp~NIl~~~~~--------------------~~kl~  216 (343)
T 1luf_A          158 STRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSE-RKFVHRDLATRNCLVGENM--------------------VVKIA  216 (343)
T ss_dssp             -----------CCCCHHHHHHHHHHHHHHHHHHHH-TTCCCSCCSGGGEEECGGG--------------------CEEEC
T ss_pred             cccccccccCCCCCCHHHHHHHHHHHHHHHHHHHh-CCeecCCCCcceEEECCCC--------------------eEEEe
Confidence                       247889999999999999999999 7999999999999998876                    79999


Q ss_pred             eccceeeecC-------CcEEEeecCCCccccCC-CCCcHHHHHHHh
Q psy9184         460 DFTISRCFVG-------EKICYYDLSQDEELFEG-EGDYQFDMYRMM  498 (562)
Q Consensus       460 DFGLSr~~~~-------~g~v~~~l~~~pelF~g-~~~~q~dIy~lm  498 (562)
                      |||+++....       ....++..|++||++.+ ..+...|||++.
T Consensus       217 Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG  263 (343)
T 1luf_A          217 DFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYG  263 (343)
T ss_dssp             CCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHCCCCHHHHHHHHH
T ss_pred             ecCCCcccccCccccccCCCcccceecChhhhccCCcCcccccHHHH
Confidence            9999976532       12334566899998765 456679998863

>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*

Probab=99.94  E-value=3.5e-27  Score=239.08  Aligned_cols=174  Identities=18%  Similarity=0.199  Sum_probs=144.6

Q ss_pred             CCCCCCceeeeeeccCceEEEEE-----------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhc-CCccccCC
Q psy9184         258 YPSSALKNCKKIGEGVYGEVFKL-----------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKET-SDLQYRTE  325 (562)
Q Consensus       258 ~~~~~y~~~~~LG~GsfG~Vyka-----------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L-~h~~~~~~  325 (562)
                      ++.++|++.+.||+|+||.||+|           ..||+|++....       .....+.+.+|+.+++.+ +|      
T Consensus        20 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~-------~~~~~~~~~~E~~~l~~l~~h------   86 (313)
T 1t46_A           20 FPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSA-------HLTEREALMSELKVLSYLGNH------   86 (313)
T ss_dssp             CCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTC-------CHHHHHHHHHHHHHHHHHCCC------
T ss_pred             cChhhhhHHHhhCccCCcceEEEEEeeccccchhhhhHHHhcCcch-------hHHHHHHHHHHHHHHhhcccC------
Confidence            35578999999999999999998           489999998653       233456789999999999 66      


Q ss_pred             CCCCcccccccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc--------------
Q psy9184         326 NSTPCFTELLKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK--------------  391 (562)
Q Consensus       326 n~~p~fv~l~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~--------------  391 (562)
                                          |||+++++++..             ++..|+||||+++|++.+.+.              
T Consensus        87 --------------------~~i~~~~~~~~~-------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~  133 (313)
T 1t46_A           87 --------------------MNIVNLLGACTI-------------GGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPA  133 (313)
T ss_dssp             --------------------TTBCCEEEEECS-------------SSSCEEEEECCTTEEHHHHHHHTTTTC--------
T ss_pred             --------------------CCeeeEEEEEec-------------CCCcEEEEecCCCCCHHHHHHhccccccccccccc
Confidence                                999999998875             457899999999998876653              


Q ss_pred             -------cCCHHHHHHHHHHHHHHHHHHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccce
Q psy9184         392 -------YRSPNQTYAMILQVVFSLAVAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTIS  464 (562)
Q Consensus       392 -------~l~e~~i~~I~~QIl~aL~yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLS  464 (562)
                             .+++.+++.++.||+.||.|||+ .||+||||||+|||++.++                    .+||+|||++
T Consensus       134 ~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~-~~i~H~dlkp~Nil~~~~~--------------------~~kl~Dfg~~  192 (313)
T 1t46_A          134 IMEDDELALDLEDLLSFSYQVAKGMAFLAS-KNCIHRDLAARNILLTHGR--------------------ITKICDFGLA  192 (313)
T ss_dssp             ------CCCCHHHHHHHHHHHHHHHHHHHH-TTCCCSCCSGGGEEEETTT--------------------EEEECCCGGG
T ss_pred             ccccccccCCHHHHHHHHHHHHHHHHHHHH-CCeecCCCccceEEEcCCC--------------------CEEEcccccc
Confidence                   27899999999999999999999 7999999999999998876                    7999999999


Q ss_pred             eeecC-------CcEEEeecCCCccccCC-CCCcHHHHHHHh
Q psy9184         465 RCFVG-------EKICYYDLSQDEELFEG-EGDYQFDMYRMM  498 (562)
Q Consensus       465 r~~~~-------~g~v~~~l~~~pelF~g-~~~~q~dIy~lm  498 (562)
                      +....       ....++..|++||++.+ ..+...|||++.
T Consensus       193 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG  234 (313)
T 1t46_A          193 RDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYG  234 (313)
T ss_dssp             SCTTSCTTSEECSSSEECGGGCCHHHHHHCCCCHHHHHHHHH
T ss_pred             ccccccccceeccCCCCcceeeChHHhcCCCCChHHHHHHHH
Confidence            87653       23344567999997755 456679998863

>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}

Probab=99.94  E-value=6.1e-27  Score=239.33  Aligned_cols=183  Identities=15%  Similarity=0.166  Sum_probs=133.7

Q ss_pred             CCCCCCceeeeeeccCceEEEEE------e---eEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCC
Q psy9184         258 YPSSALKNCKKIGEGVYGEVFKL------N---NSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENST  328 (562)
Q Consensus       258 ~~~~~y~~~~~LG~GsfG~Vyka------~---~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~  328 (562)
                      ++.++|++.+.||+|+||.||+|      .   .||||++....      ......+.+.+|+.+++.++|         
T Consensus        20 i~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~------~~~~~~~~~~~E~~~l~~l~h---------   84 (323)
T 3qup_A           20 IPEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADI------IASSDIEEFLREAACMKEFDH---------   84 (323)
T ss_dssp             CC---CEEEEEEEEETTEEEEEEEC-------CEEEEEEC------------CHHHHHHHHHHHHHTTCCC---------
T ss_pred             cChhHeEEeceecccCCeEEEEEEEcccCCcceeEEEEEecccc------cCHHHHHHHHHHHHHHHHCCC---------
Confidence            35578999999999999999999      1   79999998652      123445788999999999988         


Q ss_pred             CcccccccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc---------cCCHHHHH
Q psy9184         329 PCFTELLKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK---------YRSPNQTY  399 (562)
Q Consensus       329 p~fv~l~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~---------~l~e~~i~  399 (562)
                                       |||+++++++......       ......|+||||+.+|++.+.+.         .+++.+++
T Consensus        85 -----------------~~iv~~~~~~~~~~~~-------~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~  140 (323)
T 3qup_A           85 -----------------PHVAKLVGVSLRSRAK-------GRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLV  140 (323)
T ss_dssp             -----------------TTBCCCCEEEECC--------------CEEEEEECCTTCBHHHHHHHHHC---CCCCCHHHHH
T ss_pred             -----------------Cceehhhceeeccccc-------cCCCccEEEEEeccCCcHHHHHHhhhccccccccCHHHHH
Confidence                             9999999888652200       01123599999999998766553         38899999


Q ss_pred             HHHHHHHHHHHHHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecCC-------cE
Q psy9184         400 AMILQVVFSLAVAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVGE-------KI  472 (562)
Q Consensus       400 ~I~~QIl~aL~yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~~-------g~  472 (562)
                      .++.||+.||.|||+ .||+||||||+|||++.++                    .+||+|||+|+.....       +.
T Consensus       141 ~i~~qi~~al~~LH~-~~ivH~Dikp~NIli~~~~--------------------~~kl~Dfg~a~~~~~~~~~~~~~~~  199 (323)
T 3qup_A          141 RFMVDIACGMEYLSS-RNFIHRDLAARNCMLAEDM--------------------TVCVADFGLSRKIYSGDYYRQGCAS  199 (323)
T ss_dssp             HHHHHHHHHHHHHHH-TTCCCSCCSGGGEEECTTS--------------------CEEECCCCC----------------
T ss_pred             HHHHHHHHHHHHHHc-CCcccCCCCcceEEEcCCC--------------------CEEEeeccccccccccccccccccc
Confidence            999999999999999 7999999999999999886                    7999999999876431       22


Q ss_pred             EEeecCCCccccCCC-CCcHHHHHHHhhc
Q psy9184         473 CYYDLSQDEELFEGE-GDYQFDMYRMMRK  500 (562)
Q Consensus       473 v~~~l~~~pelF~g~-~~~q~dIy~lm~~  500 (562)
                      ..+..|++||.+.+. .+...|||++.-.
T Consensus       200 ~~~~~y~aPE~~~~~~~~~~~Di~slG~i  228 (323)
T 3qup_A          200 KLPVKWLALESLADNLYTVHSDVWAFGVT  228 (323)
T ss_dssp             -CCGGGCCHHHHHHCCCCHHHHHHHHHHH
T ss_pred             cCcccccCchhhcCCCCCCccchhhHHHH
Confidence            234568899988764 5667999886443

>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*

Probab=99.94  E-value=2.6e-26  Score=228.63  Aligned_cols=243  Identities=17%  Similarity=0.166  Sum_probs=165.3

Q ss_pred             CCCceeeeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhc-CCccccCCCCCCcccc
Q psy9184         261 SALKNCKKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKET-SDLQYRTENSTPCFTE  333 (562)
Q Consensus       261 ~~y~~~~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L-~h~~~~~~n~~p~fv~  333 (562)
                      ++|++.+.||+|+||.||+|      +.||+|++.....      .......+.+|+.++..+ +|              
T Consensus        11 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~------~~~~~~~~~~e~~~~~~l~~h--------------   70 (289)
T 1x8b_A           11 TEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLA------GSVDEQNALREVYAHAVLGQH--------------   70 (289)
T ss_dssp             HHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCCT------TSHHHHHHHHHHHHHHHSCSC--------------
T ss_pred             chhhhhhhhcCCCceEEEEEEEcCCCceEEEEEeccccc------ccHHHHHHHHHHHHHHHhCCC--------------
Confidence            46899999999999999999      8899999986531      223346788999999999 55              


Q ss_pred             cccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc-------cCCHHHHHHHHHHHH
Q psy9184         334 LLKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK-------YRSPNQTYAMILQVV  406 (562)
Q Consensus       334 l~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~-------~l~e~~i~~I~~QIl  406 (562)
                                  |||+++++++.+             ++.+|+||||++||++.+.+.       .+++.+++.++.||+
T Consensus        71 ------------~~iv~~~~~~~~-------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~  125 (289)
T 1x8b_A           71 ------------SHVVRYFSAWAE-------------DDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVG  125 (289)
T ss_dssp             ------------TTBCCEEEEEEE-------------TTEEEEEEECCTTCBHHHHHHHHHHHTCCCCHHHHHHHHHHHH
T ss_pred             ------------CCeeeeeeeeec-------------CCeEEEEEEecCCCcHHHHHHhhcccccCCCHHHHHHHHHHHH
Confidence                        999999999875             558999999999998877663       389999999999999


Q ss_pred             HHHHHHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecC-CcEEEeecCCCccccC
Q psy9184         407 FSLAVAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVG-EKICYYDLSQDEELFE  485 (562)
Q Consensus       407 ~aL~yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~-~g~v~~~l~~~pelF~  485 (562)
                      .||.|||+ .||+||||||+|||++.++....... .+...........++|+|||+++.... ....++..|++||++.
T Consensus       126 ~al~~lH~-~~ivH~Dikp~NIl~~~~~~~~~~~~-~~~~~~~~~~~~~~kl~Dfg~~~~~~~~~~~~gt~~y~aPE~~~  203 (289)
T 1x8b_A          126 RGLRYIHS-MSLVHMDIKPSNIFISRTSIPNAASE-EGDEDDWASNKVMFKIGDLGHVTRISSPQVEEGDSRFLANEVLQ  203 (289)
T ss_dssp             HHHHHHHH-TTEECSCCSGGGEEEC---------------------CCCEEECCCTTCEETTCSCCCCCCGGGCCHHHHT
T ss_pred             HHHHHHHh-CCEeecCCCHHHEEEcCCCCCccccc-ccccccccCCceEEEEcccccccccCCccccCCCccccChhHhc
Confidence            99999999 79999999999999987652111000 000001111234799999999988764 2334677899999998


Q ss_pred             CCCC--cHHHHHHHhhcccCCCCCCCCCC-ChhhhHHHHHHHHhhcccCCCCCCCchhHHHHHHHHHHHhcCCCcCcCC
Q psy9184         486 GEGD--YQFDMYRMMRKQCQNNWQNFTPK-NNVFWIHYLVDKATCLKKGYQYLRAPRHQAFELLEELGQNALHFDSCYE  561 (562)
Q Consensus       486 g~~~--~q~dIy~lm~~~~~~~W~~~~P~-tn~~wl~yl~~~Ll~~~~~~~~~~~~~~~~~~~l~~l~~~~l~~~s~~~  561 (562)
                      +...  .+.|||++.-... ....+..+. ....|     ..+.. + .++.....   .-..+.+|...+|..+...|
T Consensus       204 ~~~~~~~~~Di~slG~il~-~l~~~~~~~~~~~~~-----~~~~~-~-~~~~~~~~---~~~~~~~li~~~l~~dp~~R  271 (289)
T 1x8b_A          204 ENYTHLPKADIFALALTVV-CAAGAEPLPRNGDQW-----HEIRQ-G-RLPRIPQV---LSQEFTELLKVMIHPDPERR  271 (289)
T ss_dssp             TCCTTHHHHHHHHHHHHHH-HHTTCCCCCSSSHHH-----HHHHT-T-CCCCCSSC---CCHHHHHHHHHHTCSSGGGS
T ss_pred             CCCCCCchhhHHHHHHHHH-HHhcCCCCCcchhHH-----HHHHc-C-CCCCCCcc---cCHHHHHHHHHHhCCCcccC
Confidence            7544  4699998643332 222333222 22221     11222 1 11111111   12467778888888887665

>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*

Probab=99.94  E-value=4e-27  Score=236.33  Aligned_cols=173  Identities=21%  Similarity=0.196  Sum_probs=134.2

Q ss_pred             CCCCCceeeeeeccCceEEEEE---------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCC
Q psy9184         259 PSSALKNCKKIGEGVYGEVFKL---------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTP  329 (562)
Q Consensus       259 ~~~~y~~~~~LG~GsfG~Vyka---------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p  329 (562)
                      ..++|++.+.||+|+||.||+|         ..||+|++....       .....+.+.+|+.+++.++|          
T Consensus        13 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~~-------~~~~~~~~~~e~~~l~~l~h----------   75 (281)
T 1mp8_A           13 QRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCT-------SDSVREKFLQEALTMRQFDH----------   75 (281)
T ss_dssp             CGGGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTT-------SHHHHHHHHHHHHHHHTCCC----------
T ss_pred             ehHHeEEEeEeeecCCeeEEEEEEecCCCCceEEEEEeccccC-------CHHHHHHHHHHHHHHHhCCC----------
Confidence            3468999999999999999999         259999887542       23445678999999999998          


Q ss_pred             cccccccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc----cCCHHHHHHHHHHH
Q psy9184         330 CFTELLKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK----YRSPNQTYAMILQV  405 (562)
Q Consensus       330 ~fv~l~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~----~l~e~~i~~I~~QI  405 (562)
                                      |||+++++++.              ++..|+||||+.+|++.+.+.    .+++..++.++.||
T Consensus        76 ----------------~~iv~~~~~~~--------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi  125 (281)
T 1mp8_A           76 ----------------PHIVKLIGVIT--------------ENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQL  125 (281)
T ss_dssp             ----------------TTBCCEEEEEC--------------SSSCEEEEECCTTEEHHHHHHHTTTTSCHHHHHHHHHHH
T ss_pred             ----------------CccceEEEEEc--------------cCccEEEEecCCCCCHHHHHHhcCCCCCHHHHHHHHHHH
Confidence                            99999998874              346899999999988776654    38899999999999


Q ss_pred             HHHHHHHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecCC------cEEEeecCC
Q psy9184         406 VFSLAVAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVGE------KICYYDLSQ  479 (562)
Q Consensus       406 l~aL~yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~~------g~v~~~l~~  479 (562)
                      +.||.|||+ .||+||||||+|||++.++                    .+||+|||+|+.....      ....+..|+
T Consensus       126 ~~~l~~lH~-~~i~H~dlkp~Nil~~~~~--------------------~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~y~  184 (281)
T 1mp8_A          126 STALAYLES-KRFVHRDIAARNVLVSSND--------------------CVKLGDFGLSRYMEDSTYYKASKGKLPIKWM  184 (281)
T ss_dssp             HHHHHHHHH-TTCCCSCCSGGGEEEEETT--------------------EEEECC-------------------CCGGGC
T ss_pred             HHHHHHHHh-CCeecccccHHHEEECCCC--------------------CEEECccccccccCcccccccccCCCccccc
Confidence            999999999 7999999999999999886                    7999999999876542      122345689


Q ss_pred             CccccCC-CCCcHHHHHHHhh
Q psy9184         480 DEELFEG-EGDYQFDMYRMMR  499 (562)
Q Consensus       480 ~pelF~g-~~~~q~dIy~lm~  499 (562)
                      +||++.+ ..+...|||++.-
T Consensus       185 aPE~~~~~~~~~~~Di~slG~  205 (281)
T 1mp8_A          185 APESINFRRFTSASDVWMFGV  205 (281)
T ss_dssp             CHHHHHHCCCSHHHHHHHHHH
T ss_pred             ChhhcccCCCCCccCchHHHH
Confidence            9998875 4566689988643

>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*

Probab=99.94  E-value=3.8e-27  Score=238.95  Aligned_cols=173  Identities=22%  Similarity=0.309  Sum_probs=143.4

Q ss_pred             CCCCCceeeeeeccCceEEEEE-----------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCC
Q psy9184         259 PSSALKNCKKIGEGVYGEVFKL-----------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENS  327 (562)
Q Consensus       259 ~~~~y~~~~~LG~GsfG~Vyka-----------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~  327 (562)
                      +..+|.+.+.||+|+||.||+|           ..||+|++....       .....+.+.+|+.+++.++|        
T Consensus        21 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~-------~~~~~~~~~~E~~~l~~l~h--------   85 (314)
T 2ivs_A           21 PRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENA-------SPSELRDLLSEFNVLKQVNH--------   85 (314)
T ss_dssp             CGGGEEEEEEEEECSSSEEEEEEEETGGGCSSEEEEEEEECCTTC-------CHHHHHHHHHHHHHHTTCCC--------
T ss_pred             chhheeeeeeecccCCeeEEEEEEeccCcccCcceEEEEeccCCC-------CHHHHHHHHHHHHHHhhCCC--------
Confidence            4578999999999999999999           479999998543       24455788999999999988        


Q ss_pred             CCcccccccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc----------------
Q psy9184         328 TPCFTELLKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK----------------  391 (562)
Q Consensus       328 ~p~fv~l~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~----------------  391 (562)
                                        |||+++++++.+             ++..|+||||+.||++.+.+.                
T Consensus        86 ------------------p~iv~~~~~~~~-------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~  134 (314)
T 2ivs_A           86 ------------------PHVIKLYGACSQ-------------DGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSR  134 (314)
T ss_dssp             ------------------TTBCCEEEEECS-------------SSSCEEEEECCTTCBHHHHHHHTTTSTTEEC------
T ss_pred             ------------------CceeeEEEEEec-------------CCceEEEEeecCCCCHHHHHHHHhhccCCcccccccc
Confidence                              999999998865             457899999999998766553                


Q ss_pred             -----------cCCHHHHHHHHHHHHHHHHHHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEe
Q psy9184         392 -----------YRSPNQTYAMILQVVFSLAVAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIID  460 (562)
Q Consensus       392 -----------~l~e~~i~~I~~QIl~aL~yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~D  460 (562)
                                 .+++.+++.++.||+.||.|||+ .||+||||||+|||++.++                    .+||+|
T Consensus       135 ~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~-~~ivH~dikp~NIli~~~~--------------------~~kl~D  193 (314)
T 2ivs_A          135 NSSSLDHPDERALTMGDLISFAWQISQGMQYLAE-MKLVHRDLAARNILVAEGR--------------------KMKISD  193 (314)
T ss_dssp             ----------CEECHHHHHHHHHHHHHHHHHHHH-TTEECCCCSGGGEEEETTT--------------------EEEECC
T ss_pred             cccccccccccCcCHHHHHHHHHHHHHHHHHHHH-CCCcccccchheEEEcCCC--------------------CEEEcc
Confidence                       17889999999999999999999 7999999999999999876                    799999


Q ss_pred             ccceeeecCCc-------EEEeecCCCccccCCC-CCcHHHHHHHh
Q psy9184         461 FTISRCFVGEK-------ICYYDLSQDEELFEGE-GDYQFDMYRMM  498 (562)
Q Consensus       461 FGLSr~~~~~g-------~v~~~l~~~pelF~g~-~~~q~dIy~lm  498 (562)
                      ||+++......       ...+..|++||.+.+. .+...|||++.
T Consensus       194 fg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG  239 (314)
T 2ivs_A          194 FGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFG  239 (314)
T ss_dssp             CTTCEECTTTSCEECSSCCCSCGGGCCHHHHHHCEECHHHHHHHHH
T ss_pred             ccccccccccccceeccCCCCcccccChhhhcCCCcCchhhHHHHH
Confidence            99998765422       2234568899987663 45668998863

>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}

Probab=99.94  E-value=1.2e-27  Score=251.11  Aligned_cols=177  Identities=18%  Similarity=0.183  Sum_probs=143.0

Q ss_pred             CCCCCceeeeeeccCceEEEEE-----------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCC
Q psy9184         259 PSSALKNCKKIGEGVYGEVFKL-----------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENS  327 (562)
Q Consensus       259 ~~~~y~~~~~LG~GsfG~Vyka-----------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~  327 (562)
                      ...+|++.+.||+|+||.||+|           ..||||+++...       .......+.+|+.+++.++|        
T Consensus        69 ~~~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~-------~~~~~~~~~~E~~~l~~l~h--------  133 (367)
T 3l9p_A           69 PRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVC-------SEQDELDFLMEALIISKFNH--------  133 (367)
T ss_dssp             CGGGEEEEEECCCCSSSCEEEEEECC-----CCEEEEEEECCSSC-------CHHHHHHHHHHHHHHHHCCC--------
T ss_pred             CHhHeEEeeEeeeCCCEEEEEEEEccCCCCCcceeEEEEeccccc-------ChhhHHHHHHHHHHHHhCCC--------
Confidence            3467999999999999999999           279999997542       23344578899999999998        


Q ss_pred             CCcccccccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc----------cCCHHH
Q psy9184         328 TPCFTELLKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK----------YRSPNQ  397 (562)
Q Consensus       328 ~p~fv~l~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~----------~l~e~~  397 (562)
                                        |||+++++++.+             ....|+|||||.||++.+.+.          .+++.+
T Consensus       134 ------------------pnIv~~~~~~~~-------------~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~  182 (367)
T 3l9p_A          134 ------------------QNIVRCIGVSLQ-------------SLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLD  182 (367)
T ss_dssp             ------------------TTBCCEEEEECS-------------SSSCEEEEECCTTEEHHHHHHHHSCCSSSCCCCCHHH
T ss_pred             ------------------CCCCeEEEEEec-------------CCCCEEEEEeCCCCCHHHHHHhhccccCccccccHHH
Confidence                              999999998875             457799999999998876653          288999


Q ss_pred             HHHHHHHHHHHHHHHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecC-------C
Q psy9184         398 TYAMILQVVFSLAVAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVG-------E  470 (562)
Q Consensus       398 i~~I~~QIl~aL~yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~-------~  470 (562)
                      ++.++.||+.||.|||+ .||+||||||+|||++.++..                 ..+||+|||+|+....       .
T Consensus       183 ~~~i~~qi~~aL~~LH~-~~ivHrDlkp~NIll~~~~~~-----------------~~~kL~DFG~a~~~~~~~~~~~~~  244 (367)
T 3l9p_A          183 LLHVARDIACGCQYLEE-NHFIHRDIAARNCLLTCPGPG-----------------RVAKIGDFGMARDIYRAGYYRKGG  244 (367)
T ss_dssp             HHHHHHHHHHHHHHHHH-TTCCCSCCCGGGEEESCSSTT-----------------CCEEECCCHHHHHHHHHSSCTTCC
T ss_pred             HHHHHHHHHHHHHHHHh-CCeeCCCCChhhEEEecCCCC-----------------ceEEECCCccccccccccccccCC
Confidence            99999999999999999 799999999999999966521                 2699999999985432       1


Q ss_pred             cEEEeecCCCccccCC-CCCcHHHHHHHhh
Q psy9184         471 KICYYDLSQDEELFEG-EGDYQFDMYRMMR  499 (562)
Q Consensus       471 g~v~~~l~~~pelF~g-~~~~q~dIy~lm~  499 (562)
                      ...++..|++||++.+ ..+...|||++.-
T Consensus       245 ~~~~t~~y~aPE~~~~~~~~~~~DvwslG~  274 (367)
T 3l9p_A          245 CAMLPVKWMPPEAFMEGIFTSKTDTWSFGV  274 (367)
T ss_dssp             GGGSCGGGCCHHHHHHCCCCHHHHHHHHHH
T ss_pred             CcCCcccEECHHHhcCCCCCcHHHHHHHHH
Confidence            2234567899998755 4566799988643

>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A

Probab=99.94  E-value=6.1e-27  Score=235.71  Aligned_cols=234  Identities=16%  Similarity=0.113  Sum_probs=172.4

Q ss_pred             CCCceeeeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCccccc
Q psy9184         261 SALKNCKKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTEL  334 (562)
Q Consensus       261 ~~y~~~~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~l  334 (562)
                      ..|.+.+.||+|+||.||+|      ..||+|++....      ......+.+.+|+.+++.++|               
T Consensus        26 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~va~k~~~~~~------~~~~~~~~~~~e~~~l~~l~h---------------   84 (290)
T 1t4h_A           26 RFLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRK------LTKSERQRFKEEAEMLKGLQH---------------   84 (290)
T ss_dssp             CEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGG------SCHHHHHHHHHHHHHHTTCCC---------------
T ss_pred             eeEEeeeeccCCCCeEEEEeEecCCceEEEEEEecchh------hCHHHHHHHHHHHHHHHhCCC---------------
Confidence            45889999999999999999      789999998642      224445788999999999998               


Q ss_pred             ccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc---cCCHHHHHHHHHHHHHHHHH
Q psy9184         335 LKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK---YRSPNQTYAMILQVVFSLAV  411 (562)
Q Consensus       335 ~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~---~l~e~~i~~I~~QIl~aL~y  411 (562)
                                 |||++++++|....         .....+|+||||+.+|++.+.+.   .+++..++.++.||+.||.|
T Consensus        85 -----------~~iv~~~~~~~~~~---------~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~  144 (290)
T 1t4h_A           85 -----------PNIVRFYDSWESTV---------KGKKCIVLVTELMTSGTLKTYLKRFKVMKIKVLRSWCRQILKGLQF  144 (290)
T ss_dssp             -----------TTBCCEEEEEEEES---------SSCEEEEEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHH
T ss_pred             -----------CCeeeeeeeecccc---------CCCceEEEEEEecCCCCHHHHHHHccCCCHHHHHHHHHHHHHHHHH
Confidence                       99999998886421         12457899999999998876664   48999999999999999999


Q ss_pred             HHhhCC--eEeccCCCCCEEEc-cCCCCCcccccCCcccccccCCceEEEEeccceeeecCC---cEEEeecCCCccccC
Q psy9184         412 AEVELE--FEHRDLHMSNILVL-QTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVGE---KICYYDLSQDEELFE  485 (562)
Q Consensus       412 LH~~~~--IiHRDLKpeNILl~-~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~~---g~v~~~l~~~pelF~  485 (562)
                      ||+ .+  |+||||||+|||++ .++                    .+||+|||+++.....   ...++..|++||++.
T Consensus       145 lH~-~~~~i~H~dikp~Nil~~~~~~--------------------~~kl~Dfg~~~~~~~~~~~~~~~t~~y~aPE~~~  203 (290)
T 1t4h_A          145 LHT-RTPPIIHRDLKCDNIFITGPTG--------------------SVKIGDLGLATLKRASFAKAVIGTPEFMAPEMYE  203 (290)
T ss_dssp             HHT-SSSCCCCSCCCGGGEEESSTTS--------------------CEEECCTTGGGGCCTTSBEESCSSCCCCCGGGGG
T ss_pred             HHc-CCCCEEECCCCHHHEEEECCCC--------------------CEEEeeCCCcccccccccccccCCcCcCCHHHHh
Confidence            999 68  99999999999998 444                    7999999999765442   223567899999999


Q ss_pred             CCCCcHHHHHHHhhcccCCCCCCCCCCChhhhHHHHHHHHhhcccCCCCCCCchhHHHHHHHHHHHhcCCCcCcCC
Q psy9184         486 GEGDYQFDMYRMMRKQCQNNWQNFTPKNNVFWIHYLVDKATCLKKGYQYLRAPRHQAFELLEELGQNALHFDSCYE  561 (562)
Q Consensus       486 g~~~~q~dIy~lm~~~~~~~W~~~~P~tn~~wl~yl~~~Ll~~~~~~~~~~~~~~~~~~~l~~l~~~~l~~~s~~~  561 (562)
                      +......|||++.-... ..+.+..|+........+...+.. ........   ......+.+|...+|.++...|
T Consensus       204 ~~~~~~~Di~slG~~l~-~l~~g~~pf~~~~~~~~~~~~~~~-~~~~~~~~---~~~~~~l~~li~~~l~~dp~~R  274 (290)
T 1t4h_A          204 EKYDESVDVYAFGMCML-EMATSEYPYSECQNAAQIYRRVTS-GVKPASFD---KVAIPEVKEIIEGCIRQNKDER  274 (290)
T ss_dssp             TCCCTHHHHHHHHHHHH-HHHHSSCTTTTCSSHHHHHHHHTT-TCCCGGGG---GCCCHHHHHHHHHHSCSSGGGS
T ss_pred             ccCCCcchHHHHHHHHH-HHHhCCCCCCCcCcHHHHHHHHhc-cCCccccC---CCCCHHHHHHHHHHccCChhhC
Confidence            88888899998644433 333444455332223333343433 11111100   0113467888899999887665

>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*

Probab=99.94  E-value=1.4e-26  Score=233.30  Aligned_cols=173  Identities=17%  Similarity=0.241  Sum_probs=139.5

Q ss_pred             CCCCceeeeeeccCceEEEEE----eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHh--cCCccccCCCCCCcccc
Q psy9184         260 SSALKNCKKIGEGVYGEVFKL----NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKE--TSDLQYRTENSTPCFTE  333 (562)
Q Consensus       260 ~~~y~~~~~LG~GsfG~Vyka----~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~--L~h~~~~~~n~~p~fv~  333 (562)
                      .++|++.+.||+|+||.||+|    +.||||++....           ...+.+|..++..  ++|              
T Consensus         7 ~~~y~~~~~lg~G~~g~V~~~~~~~~~vavK~~~~~~-----------~~~~~~e~~~~~~~~l~h--------------   61 (301)
T 3q4u_A            7 ARDITLLECVGKGRYGEVWRGSWQGENVAVKIFSSRD-----------EKSWFRETELYNTVMLRH--------------   61 (301)
T ss_dssp             GGGCEEEEEEEECSSEEEEEEEETTEEEEEEEECGGG-----------HHHHHHHHHHHHHTCCCC--------------
T ss_pred             cCcEEEEEeeccCCCcEEEEEEECCEEEEEEEecccc-----------chhhHHHHHHHHHhhccC--------------
Confidence            367999999999999999999    899999987431           2345667777776  666              


Q ss_pred             cccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc--cCCHHHHHHHHHHHHHHHHH
Q psy9184         334 LLKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK--YRSPNQTYAMILQVVFSLAV  411 (562)
Q Consensus       334 l~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~--~l~e~~i~~I~~QIl~aL~y  411 (562)
                                  |||+++++++....         .....+|+||||+.+|++.+.+.  .+++..++.++.||+.||.|
T Consensus        62 ------------~niv~~~~~~~~~~---------~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~i~~~i~~~l~~  120 (301)
T 3q4u_A           62 ------------ENILGFIASDMTSR---------HSSTQLWLITHYHEMGSLYDYLQLTTLDTVSCLRIVLSIASGLAH  120 (301)
T ss_dssp             ------------TTBCCEEEEEEEEE---------TTEEEEEEEECCCTTCBHHHHHTTCCBCHHHHHHHHHHHHHHHHH
T ss_pred             ------------cCeeeEEEeecccc---------CCCceeEEehhhccCCCHHHHHhhcccCHHHHHHHHHHHHHHHHH
Confidence                        99999988765422         12347899999999998877665  48999999999999999999


Q ss_pred             HH--------hhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecCC---------cEEE
Q psy9184         412 AE--------VELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVGE---------KICY  474 (562)
Q Consensus       412 LH--------~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~~---------g~v~  474 (562)
                      ||        + .+|+||||||+|||++.++                    .+||+|||+|+.....         ...+
T Consensus       121 lH~~~~~~~~~-~~ivH~Dlkp~Nill~~~~--------------------~~kl~Dfg~a~~~~~~~~~~~~~~~~~~g  179 (301)
T 3q4u_A          121 LHIEIFGTQGK-PAIAHRDLKSKNILVKKNG--------------------QCCIADLGLAVMHSQSTNQLDVGNNPRVG  179 (301)
T ss_dssp             HHSCBCSTTCB-CEEECSCCCGGGEEECTTS--------------------CEEECCCTTCEEEETTTTEEECCCCCCCC
T ss_pred             HHHhhhhccCC-CCeecCCCChHhEEEcCCC--------------------CEEEeeCCCeeeccccccccccccccccc
Confidence            99        8 7999999999999999876                    7999999999876542         1256


Q ss_pred             eecCCCccccCCCCC-------cHHHHHHHhh
Q psy9184         475 YDLSQDEELFEGEGD-------YQFDMYRMMR  499 (562)
Q Consensus       475 ~~l~~~pelF~g~~~-------~q~dIy~lm~  499 (562)
                      +..|++||++.+...       ...|||++.-
T Consensus       180 t~~y~aPE~~~~~~~~~~~~~~~~~DvwslG~  211 (301)
T 3q4u_A          180 TKRYMAPEVLDETIQVDCFDSYKRVDIWAFGL  211 (301)
T ss_dssp             CGGGCCHHHHTTCCCTTCHHHHHHHHHHHHHH
T ss_pred             ccceeChhhhcCcCCCCcccCCchhhHHHHHH
Confidence            778999999887532       3589988643

>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*

Probab=99.94  E-value=3.3e-26  Score=234.21  Aligned_cols=173  Identities=21%  Similarity=0.188  Sum_probs=146.1

Q ss_pred             CCCCCceeeeeeccCceEEEEE-----eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCcccc
Q psy9184         259 PSSALKNCKKIGEGVYGEVFKL-----NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTE  333 (562)
Q Consensus       259 ~~~~y~~~~~LG~GsfG~Vyka-----~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~  333 (562)
                      ..++|++.+.||+|+||.||+|     +.||||++....        ....+.+.+|+.+++.++|              
T Consensus        37 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~--------~~~~~~~~~E~~~l~~l~h--------------   94 (321)
T 2qkw_B           37 ATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPES--------SQGIEEFETEIETLSFCRH--------------   94 (321)
T ss_dssp             CCCCCSCCCCSCBCSSSEEEEEECTTCCEEEEEECCSCC--------SSHHHHHHHHHHGGGSCCC--------------
T ss_pred             HHhccCccceeecCCCeeEEEEEECCCCEEEEEEecccC--------hHHHHHHHHHHHHHHhCCC--------------
Confidence            3478999999999999999999     799999887543        2334678899999999988              


Q ss_pred             cccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc-------cCCHHHHHHHHHHHH
Q psy9184         334 LLKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK-------YRSPNQTYAMILQVV  406 (562)
Q Consensus       334 l~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~-------~l~e~~i~~I~~QIl  406 (562)
                                  |||+++++++..             .+..|+||||+.||++.+.+.       .+++.+++.++.||+
T Consensus        95 ------------~~iv~~~~~~~~-------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~  149 (321)
T 2qkw_B           95 ------------PHLVSLIGFCDE-------------RNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAA  149 (321)
T ss_dssp             ------------TTBCCEEEECCC-------------TTCCEEEEECCTTCBTGGGSSSSCCCSCCCCHHHHHHHHHHHH
T ss_pred             ------------CCEeeEEEEEcC-------------CCeEEEEEEcCCCCcHHHHHhccCCCccccCHHHHHHHHHHHH
Confidence                        999999998865             457899999999998877663       378999999999999


Q ss_pred             HHHHHHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecC-------CcEEEeecCC
Q psy9184         407 FSLAVAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVG-------EKICYYDLSQ  479 (562)
Q Consensus       407 ~aL~yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~-------~g~v~~~l~~  479 (562)
                      .||.|||+ .||+||||||+|||++.++                    .+||+|||+++....       ....++..|+
T Consensus       150 ~~l~~lH~-~~ivH~dlkp~Nil~~~~~--------------------~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~  208 (321)
T 2qkw_B          150 RGLHYLHT-RAIIHRDVKSINILLDENF--------------------VPKITDFGISKKGTELDQTHLSTVVKGTLGYI  208 (321)
T ss_dssp             HHHHHHHH-TTEECSCCCSTTEEECTTC--------------------CEEECCCTTCEECSSSSCCCCBCCCEEETTTC
T ss_pred             HHHHHhcC-CCeecCCCCHHHEEECCCC--------------------CEEEeecccccccccccccccccccCCCcccc
Confidence            99999999 7999999999999998876                    799999999987543       2345688899


Q ss_pred             CccccCC-CCCcHHHHHHHhh
Q psy9184         480 DEELFEG-EGDYQFDMYRMMR  499 (562)
Q Consensus       480 ~pelF~g-~~~~q~dIy~lm~  499 (562)
                      +||++.+ ..+...|||++.-
T Consensus       209 aPE~~~~~~~~~~~Di~slG~  229 (321)
T 2qkw_B          209 DPEYFIKGRLTEKSDVYSFGV  229 (321)
T ss_dssp             CHHHHHHCBCCTHHHHHHHHH
T ss_pred             CHHHhcCCCCCcccchHhHHH
Confidence            9998755 4566799988643

>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*

Probab=99.94  E-value=3.7e-27  Score=248.07  Aligned_cols=173  Identities=21%  Similarity=0.187  Sum_probs=143.4

Q ss_pred             CCCCCceeeeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCccc
Q psy9184         259 PSSALKNCKKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFT  332 (562)
Q Consensus       259 ~~~~y~~~~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv  332 (562)
                      ..++|.+.+.||+|+||.||+|      +.||||+++...       .......+.+|+.+++.++|             
T Consensus       112 ~~~~~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~-------~~~~~~~~~~E~~~l~~l~h-------------  171 (377)
T 3cbl_A          112 NHEDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETL-------PPDLKAKFLQEARILKQYSH-------------  171 (377)
T ss_dssp             CGGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEECCTTS-------CHHHHTTTTHHHHHHTTCCC-------------
T ss_pred             chHHeEEeeEeccCCCCeEEEEEEecCCeEEEEEEccccC-------CHHHHHHHHHHHHHHHhCCC-------------
Confidence            3467899999999999999999      789999987542       23344578899999999998             


Q ss_pred             ccccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc----cCCHHHHHHHHHHHHHH
Q psy9184         333 ELLKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK----YRSPNQTYAMILQVVFS  408 (562)
Q Consensus       333 ~l~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~----~l~e~~i~~I~~QIl~a  408 (562)
                                   |||+++++++..             ++.+|+||||++||++.+.+.    .+++.++..++.||+.|
T Consensus       172 -------------pniv~~~~~~~~-------------~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~  225 (377)
T 3cbl_A          172 -------------PNIVRLIGVCTQ-------------KQPIYIVMELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAG  225 (377)
T ss_dssp             -------------TTBCCEEEEECS-------------SSSCEEEEECCTTCBHHHHHHHHGGGCCHHHHHHHHHHHHHH
T ss_pred             -------------CCEEEEEEEEec-------------CCCcEEEEEcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHH
Confidence                         999999998865             457899999999998877664    38999999999999999


Q ss_pred             HHHHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecCC-------cEEEeecCCCc
Q psy9184         409 LAVAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVGE-------KICYYDLSQDE  481 (562)
Q Consensus       409 L~yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~~-------g~v~~~l~~~p  481 (562)
                      |+|||+ .||+||||||+|||++.++                    .+||+|||+|+.....       ....+..|++|
T Consensus       226 l~~LH~-~~ivHrDlkp~Nil~~~~~--------------------~~kl~DfG~s~~~~~~~~~~~~~~~~~~~~y~aP  284 (377)
T 3cbl_A          226 MEYLES-KCCIHRDLAARNCLVTEKN--------------------VLKISDFGMSREEADGVYAASGGLRQVPVKWTAP  284 (377)
T ss_dssp             HHHHHH-TTEECSCCSGGGEEECTTC--------------------CEEECCGGGCEECTTSEEECCSSCCEEEGGGSCH
T ss_pred             HHHHHH-CCcCCcccCHHHEEEcCCC--------------------cEEECcCCCceecCCCceeecCCCCCCCcCcCCH
Confidence            999999 7999999999999998876                    7999999999875431       12235568999


Q ss_pred             cccCC-CCCcHHHHHHHh
Q psy9184         482 ELFEG-EGDYQFDMYRMM  498 (562)
Q Consensus       482 elF~g-~~~~q~dIy~lm  498 (562)
                      |.+.+ ..+...|||++.
T Consensus       285 E~~~~~~~~~~~DvwslG  302 (377)
T 3cbl_A          285 EALNYGRYSSESDVWSFG  302 (377)
T ss_dssp             HHHHHCEEEHHHHHHHHH
T ss_pred             hHhccCCCCchhhHHHHH
Confidence            98875 345669998853

>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*

Probab=99.94  E-value=4.6e-27  Score=241.83  Aligned_cols=226  Identities=15%  Similarity=0.136  Sum_probs=165.3

Q ss_pred             CCCCceeeeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCcccc
Q psy9184         260 SSALKNCKKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTE  333 (562)
Q Consensus       260 ~~~y~~~~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~  333 (562)
                      .++|++.+.||+|+||.||+|      +.||||++.....          ...+.+|+.+++.+.+              
T Consensus         8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~----------~~~~~~E~~~l~~l~~--------------   63 (330)
T 2izr_A            8 GPNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKSR----------APQLHLEYRFYKQLGS--------------   63 (330)
T ss_dssp             TTTEEEEEECCC-CTTSEEEEEETTTTEEEEEEEEETTCS----------SCCHHHHHHHHHHHCS--------------
T ss_pred             cCCeEEEEEeeccCCceEEEEEECCCCcEEEEEEeccccc----------hHHHHHHHHHHHHhhC--------------
Confidence            467999999999999999999      7899999986531          1246789999999943              


Q ss_pred             cccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc----cCCHHHHHHHHHHHHHHH
Q psy9184         334 LLKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK----YRSPNQTYAMILQVVFSL  409 (562)
Q Consensus       334 l~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~----~l~e~~i~~I~~QIl~aL  409 (562)
                                 ||||+++++++..             ++..|+||||+ +|++.+.+.    .+++..++.++.||+.||
T Consensus        64 -----------h~~i~~~~~~~~~-------------~~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l  118 (330)
T 2izr_A           64 -----------GDGIPQVYYFGPC-------------GKYNAMVLELL-GPSLEDLFDLCDRTFSLKTVLMIAIQLISRM  118 (330)
T ss_dssp             -----------CTTSCCEEEEEEE-------------TTEEEEEEECC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHH
T ss_pred             -----------CCCCCEEEEEEec-------------CCccEEEEEeC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHH
Confidence                       3999999998875             55899999999 787766553    489999999999999999


Q ss_pred             HHHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecC------------CcEEEeec
Q psy9184         410 AVAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVG------------EKICYYDL  477 (562)
Q Consensus       410 ~yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~------------~g~v~~~l  477 (562)
                      .|||+ .||+||||||+|||++.++..               ....+||+|||+|+....            ....++..
T Consensus       119 ~~LH~-~~iiHrDlkp~Nill~~~~~~---------------~~~~~kl~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~  182 (330)
T 2izr_A          119 EYVHS-KNLIYRDVKPENFLIGRPGNK---------------TQQVIHIIDFALAKEYIDPETKKHIPYREHKSLTGTAR  182 (330)
T ss_dssp             HHHHH-TTEECCCCCGGGEEECCGGGT---------------CTTSEEECCCTTCEESBCTTTCCBCCCCCCCCCCSCTT
T ss_pred             HHHHh-CCeeccCCCHHHeeeccCCCC---------------CCceEEEEEcccceeeecCCCCccccccccCCcCCCcc
Confidence            99999 799999999999999887520               011399999999997643            23456788


Q ss_pred             CCCccccCCC-CCcHHHHHHHhhccc-----CCCCCCCCCCCh----------------------hhhHHHHHHHHhhcc
Q psy9184         478 SQDEELFEGE-GDYQFDMYRMMRKQC-----QNNWQNFTPKNN----------------------VFWIHYLVDKATCLK  529 (562)
Q Consensus       478 ~~~pelF~g~-~~~q~dIy~lm~~~~-----~~~W~~~~P~tn----------------------~~wl~yl~~~Ll~~~  529 (562)
                      |++||++.+. .+...|||++.-...     ...|....+..-                      ...+..++..|+.  
T Consensus       183 y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~p~~~~li~~~l~--  260 (330)
T 2izr_A          183 YMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQGLKADTLKERYQKIGDTKRATPIEVLCENFPEMATYLRYVRR--  260 (330)
T ss_dssp             TCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCSSHHHHHHHHHHHHHHSCHHHHTTTCHHHHHHHHHHHH--
T ss_pred             ccChHHHcCCCCCchhHHHHHHHHHHHHhcCCCCccccccccHHHHHHHHHhhhccCCHHHHhccChHHHHHHHHHHh--
Confidence            9999998874 566699988643332     233433222110                      1134455556665  


Q ss_pred             cCCCCCCCchhHHHHHHHHHHHhc
Q psy9184         530 KGYQYLRAPRHQAFELLEELGQNA  553 (562)
Q Consensus       530 ~~~~~~~~~~~~~~~~l~~l~~~~  553 (562)
                       .-+..|+......+.|+++.+..
T Consensus       261 -~~p~~RP~~~~l~~~l~~~~~~~  283 (330)
T 2izr_A          261 -LDFFEKPDYDYLRKLFTDLFDRK  283 (330)
T ss_dssp             -CCTTCCCCHHHHHHHHHHHHHHT
T ss_pred             -CCCCCCCCHHHHHHHHHHHHHHc
Confidence             23344555555577777766654

>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...

Probab=99.94  E-value=1.1e-26  Score=243.75  Aligned_cols=179  Identities=22%  Similarity=0.280  Sum_probs=138.5

Q ss_pred             CCCceeeeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCccccc
Q psy9184         261 SALKNCKKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTEL  334 (562)
Q Consensus       261 ~~y~~~~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~l  334 (562)
                      ++|++.+.||+|+||.||+|      +.||||++....      ........+.+|+.+++.++|               
T Consensus        25 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~------~~~~~~~~~~~E~~~l~~l~h---------------   83 (371)
T 2xrw_A           25 KRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPF------QNQTHAKRAYRELVLMKCVNH---------------   83 (371)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECTT------SSHHHHHHHHHHHHHHHHCCC---------------
T ss_pred             hheeEeeeeEecCCEEEEEEEECCCCceEEEEEecccc------CChHHHHHHHHHHHHHHhcCC---------------
Confidence            67999999999999999999      789999998642      124445678899999999998               


Q ss_pred             ccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc-cCCHHHHHHHHHHHHHHHHHHH
Q psy9184         335 LKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK-YRSPNQTYAMILQVVFSLAVAE  413 (562)
Q Consensus       335 ~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~-~l~e~~i~~I~~QIl~aL~yLH  413 (562)
                                 |||++++++|....       .......+|+||||+.+ ++.+.+. .+++..+..++.||+.||.|||
T Consensus        84 -----------pniv~~~~~~~~~~-------~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~i~~qi~~al~~lH  144 (371)
T 2xrw_A           84 -----------KNIIGLLNVFTPQK-------SLEEFQDVYIVMELMDA-NLCQVIQMELDHERMSYLLYQMLCGIKHLH  144 (371)
T ss_dssp             -----------TTBCCEEEEECSCC-------STTTCCEEEEEEECCSE-EHHHHHHSCCCHHHHHHHHHHHHHHHHHHH
T ss_pred             -----------CCccceEEeecccc-------ccccccceEEEEEcCCC-CHHHHHhhccCHHHHHHHHHHHHHHHHHHH
Confidence                       99999998886522       11123478999999985 4555543 4899999999999999999999


Q ss_pred             hhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecC----CcEEEeecCCCccccCCC-C
Q psy9184         414 VELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVG----EKICYYDLSQDEELFEGE-G  488 (562)
Q Consensus       414 ~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~----~g~v~~~l~~~pelF~g~-~  488 (562)
                      + .||+||||||+|||++.++                    .+||+|||+|+....    ...+++..|++||++.+. .
T Consensus       145 ~-~~ivH~Dlkp~NIl~~~~~--------------------~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~  203 (371)
T 2xrw_A          145 S-AGIIHRDLKPSNIVVKSDC--------------------TLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGY  203 (371)
T ss_dssp             H-TTCCCSCCCGGGEEECTTS--------------------CEEECCCCC----------------CTTCCHHHHTTCCC
T ss_pred             H-CCeecccCCHHHEEEcCCC--------------------CEEEEEeecccccccccccCCceecCCccCHHHhcCCCC
Confidence            9 7999999999999999886                    799999999987654    234568889999998874 4


Q ss_pred             CcHHHHHHHhhc
Q psy9184         489 DYQFDMYRMMRK  500 (562)
Q Consensus       489 ~~q~dIy~lm~~  500 (562)
                      +...|||++.-.
T Consensus       204 ~~~~DiwslG~i  215 (371)
T 2xrw_A          204 KENVDIWSVGCI  215 (371)
T ss_dssp             CTTHHHHHHHHH
T ss_pred             CchHhHHHHHHH
Confidence            666999886433

>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}

Probab=99.94  E-value=3.9e-27  Score=249.49  Aligned_cols=180  Identities=14%  Similarity=0.154  Sum_probs=143.1

Q ss_pred             CCCCceeeeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCcccc
Q psy9184         260 SSALKNCKKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTE  333 (562)
Q Consensus       260 ~~~y~~~~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~  333 (562)
                      ..+|++.++||+|+||.||+|      +.||||++....       .....+.+.+|+.+++.++|              
T Consensus         8 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~-------~~~~~~~~~~E~~~l~~l~h--------------   66 (396)
T 4eut_A            8 NHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNIS-------FLRPVDVQMREFEVLKKLNH--------------   66 (396)
T ss_dssp             SEEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGG-------GGSCHHHHHHHHHHHHHCCC--------------
T ss_pred             CCceEEEEEEEcCCCeEEEEEEECCCCcEEEEEEecccc-------ccchHHHHHHHHHHHHhcCC--------------
Confidence            367999999999999999999      789999998532       12234567899999999998              


Q ss_pred             cccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCcccccc------CCHHHHHHHHHHHHH
Q psy9184         334 LLKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIKY------RSPNQTYAMILQVVF  407 (562)
Q Consensus       334 l~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~~------l~e~~i~~I~~QIl~  407 (562)
                                  |||+++++++....           ....|+|||||.||++.+.+..      +++.+++.++.||+.
T Consensus        67 ------------pnIv~~~~~~~~~~-----------~~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~  123 (396)
T 4eut_A           67 ------------KNIVKLFAIEEETT-----------TRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVG  123 (396)
T ss_dssp             ------------TTBCCEEEEEECTT-----------TCCEEEEECCCTTEEHHHHTTSGGGTTCCCHHHHHHHHHHHHH
T ss_pred             ------------CCCCeEEEeeccCC-----------CCeeEEEEecCCCCCHHHHHHhhhcccCCCHHHHHHHHHHHHH
Confidence                        99999999887522           3478999999999988776643      899999999999999


Q ss_pred             HHHHHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecC----CcEEEeecCCCccc
Q psy9184         408 SLAVAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVG----EKICYYDLSQDEEL  483 (562)
Q Consensus       408 aL~yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~----~g~v~~~l~~~pel  483 (562)
                      ||.|||+ .||+||||||+|||+......                ...+||+|||+|+....    ....++..|++||+
T Consensus       124 aL~~LH~-~~ivH~Dlkp~NIll~~~~~~----------------~~~~kL~DFG~a~~~~~~~~~~~~~gt~~y~aPE~  186 (396)
T 4eut_A          124 GMNHLRE-NGIVHRNIKPGNIMRVIGEDG----------------QSVYKLTDFGAARELEDDEQFVSLYGTEEYLHPDM  186 (396)
T ss_dssp             HHHHHHH-TTEECCCCCGGGEEEEECTTS----------------CEEEEECCGGGCEECCCGGGSSCSSSCCTTCCHHH
T ss_pred             HHHHHHH-CCEEECCcCHHHEEEeecCCC----------------ceeEEEecCCCceEccCCCccccccCCccccCHHH
Confidence            9999999 799999999999998332110                12799999999988654    23445778999998


Q ss_pred             cCC---------CCCcHHHHHHHhhc
Q psy9184         484 FEG---------EGDYQFDMYRMMRK  500 (562)
Q Consensus       484 F~g---------~~~~q~dIy~lm~~  500 (562)
                      +.+         ......|||++.-.
T Consensus       187 ~~~~~~~~~~~~~~~~~~DiwSlG~i  212 (396)
T 4eut_A          187 YERAVLRKDHQKKYGATVDLWSIGVT  212 (396)
T ss_dssp             HHHHCC--CHHHHHHHHHHHHHHHHH
T ss_pred             hhccccccccccCCCcHHHHHHHHHH
Confidence            864         23345899886433

>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*

Probab=99.94  E-value=1.3e-26  Score=233.72  Aligned_cols=229  Identities=15%  Similarity=0.140  Sum_probs=168.4

Q ss_pred             CCCCceeeeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCcccc
Q psy9184         260 SSALKNCKKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTE  333 (562)
Q Consensus       260 ~~~y~~~~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~  333 (562)
                      ..+|.+.+.||+|+||.||+|      +.||+|++....     .......+.+.+|+.+++.+.|              
T Consensus        14 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~-----~~~~~~~~~~~~e~~~l~~l~h--------------   74 (294)
T 2rku_A           14 RRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSL-----LLKPHQREKMSMEISIHRSLAH--------------   74 (294)
T ss_dssp             TEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGG-----CCSHHHHHHHHHHHHHHHTCCC--------------
T ss_pred             ccceEEEEEEeecCCEEEEEEEECCCCceEEEEEechhh-----ccCHHHHHHHHHHHHHHHhCCC--------------
Confidence            367999999999999999999      689999998653     1223455678899999999988              


Q ss_pred             cccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc---cCCHHHHHHHHHHHHHHHH
Q psy9184         334 LLKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK---YRSPNQTYAMILQVVFSLA  410 (562)
Q Consensus       334 l~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~---~l~e~~i~~I~~QIl~aL~  410 (562)
                                  |||+++++++.+             .+..|+||||+.+|++.+.+.   .+++.+++.++.||+.||.
T Consensus        75 ------------~~iv~~~~~~~~-------------~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~i~~qi~~~l~  129 (294)
T 2rku_A           75 ------------QHVVGFHGFFED-------------NDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQ  129 (294)
T ss_dssp             ------------TTBCCEEEEEEC-------------SSEEEEEEECCTTCBHHHHHHHHCSCCHHHHHHHHHHHHHHHH
T ss_pred             ------------CCEeeeeeeecc-------------CCEEEEEEecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHH
Confidence                        999999999875             558999999999887766553   4899999999999999999


Q ss_pred             HHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecCC-----cEEEeecCCCccccC
Q psy9184         411 VAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVGE-----KICYYDLSQDEELFE  485 (562)
Q Consensus       411 yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~~-----g~v~~~l~~~pelF~  485 (562)
                      |||+ .||+||||||+|||++.++                    .+||+|||+++.....     ...++..|++||++.
T Consensus       130 ~lH~-~~i~H~dl~p~Nil~~~~~--------------------~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~  188 (294)
T 2rku_A          130 YLHR-NRVIHRDLKLGNLFLNEDL--------------------EVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLS  188 (294)
T ss_dssp             HHHH-TTEECCCCCGGGEEECTTC--------------------CEEECCCTTCEECCSTTCCBCCCCSCCSSCCHHHHT
T ss_pred             HHHH-CCccccCCChHhEEEcCCC--------------------CEEEEeccCceecccCccccccccCCCCcCCcchhc
Confidence            9999 7999999999999999876                    7999999999876531     233466789999887


Q ss_pred             CC-CCcHHHHHHHhhcccCCCCCCCCCCChhhhHHHHHHHHhhcccCCCCCCCchhHHHHHHHHHHHhcCCCcCcCC
Q psy9184         486 GE-GDYQFDMYRMMRKQCQNNWQNFTPKNNVFWIHYLVDKATCLKKGYQYLRAPRHQAFELLEELGQNALHFDSCYE  561 (562)
Q Consensus       486 g~-~~~q~dIy~lm~~~~~~~W~~~~P~tn~~wl~yl~~~Ll~~~~~~~~~~~~~~~~~~~l~~l~~~~l~~~s~~~  561 (562)
                      +. .....|||++.-... ..+.+..|+....... ....+......++..      .-..+.+|...+|..+...|
T Consensus       189 ~~~~~~~~Di~slG~~l~-~l~~g~~p~~~~~~~~-~~~~~~~~~~~~~~~------~~~~~~~li~~~l~~~p~~R  257 (294)
T 2rku_A          189 KKGHSFEVDVWSIGCIMY-TLLVGKPPFETSCLKE-TYLRIKKNEYSIPKH------INPVAASLIQKMLQTDPTAR  257 (294)
T ss_dssp             TSCBCTHHHHHHHHHHHH-HHHHSSCTTCCSSHHH-HHHHHHTTCCCCCTT------SCHHHHHHHHHHTCSSGGGS
T ss_pred             cCCCCchhhHHHHHHHHH-HHHhCCCCCCCCCHHH-HHHHHhhccCCCccc------cCHHHHHHHHHHcccChhhC
Confidence            74 455699988643332 3334444443322111 112222211112111      12356677888888776654

>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...

Probab=99.94  E-value=6.6e-27  Score=237.42  Aligned_cols=176  Identities=21%  Similarity=0.247  Sum_probs=144.7

Q ss_pred             CCCCCceeeeeeccCceEEEEE-----------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCC
Q psy9184         259 PSSALKNCKKIGEGVYGEVFKL-----------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENS  327 (562)
Q Consensus       259 ~~~~y~~~~~LG~GsfG~Vyka-----------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~  327 (562)
                      ..++|++.+.||+|+||.||+|           +.||||++....       .......+.+|+.+++.+.+        
T Consensus        25 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~-------~~~~~~~~~~E~~~l~~l~~--------   89 (316)
T 2xir_A           25 PRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGA-------THSEHRALMSELKILIHIGH--------   89 (316)
T ss_dssp             CGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTC-------CHHHHHHHHHHHHHHHHHCC--------
T ss_pred             chhheeeeeEEcCCCceeEEEEEEecCCccccceEEEEEecccCC-------CcHHHHHHHHHHHHHHhccc--------
Confidence            4578999999999999999998           579999998643       23445678999999999965        


Q ss_pred             CCcccccccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCcccccc---------------
Q psy9184         328 TPCFTELLKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIKY---------------  392 (562)
Q Consensus       328 ~p~fv~l~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~~---------------  392 (562)
                                       ||||+++++++..            .+..+|+||||+.||++.+.+..               
T Consensus        90 -----------------hp~iv~~~~~~~~------------~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~  140 (316)
T 2xir_A           90 -----------------HLNVVNLLGACTK------------PGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDL  140 (316)
T ss_dssp             -----------------CTTBCCEEEEECC------------TTSCCEEEEECCTTEEHHHHHHTCTTSEECC-------
T ss_pred             -----------------CCCeeeEEEEEec------------CCCceEEEEEcCCCCcHHHHHHhcccccccccccchhh
Confidence                             5999999998864            23468999999999887665532               


Q ss_pred             ----CCHHHHHHHHHHHHHHHHHHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeec
Q psy9184         393 ----RSPNQTYAMILQVVFSLAVAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFV  468 (562)
Q Consensus       393 ----l~e~~i~~I~~QIl~aL~yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~  468 (562)
                          +++..++.++.||+.||.|||+ .||+||||||+|||++.++                    .+||+|||+++...
T Consensus       141 ~~~~~~~~~~~~~~~qi~~al~~lH~-~~i~H~dikp~Nil~~~~~--------------------~~kl~Dfg~~~~~~  199 (316)
T 2xir_A          141 YKDFLTLEHLICYSFQVAKGMEFLAS-RKCIHRDLAARNILLSEKN--------------------VVKICDFGLARDIY  199 (316)
T ss_dssp             CTTCEEHHHHHHHHHHHHHHHHHHHH-TTCCCSCCSGGGEEECGGG--------------------CEEECCCGGGSCTT
T ss_pred             hccccCHHHHHHHHHHHHHHHHHHHh-CCcccccCccceEEECCCC--------------------CEEECCCccccccc
Confidence                6889999999999999999999 7999999999999998776                    79999999998654


Q ss_pred             C-------CcEEEeecCCCccccCC-CCCcHHHHHHHhh
Q psy9184         469 G-------EKICYYDLSQDEELFEG-EGDYQFDMYRMMR  499 (562)
Q Consensus       469 ~-------~g~v~~~l~~~pelF~g-~~~~q~dIy~lm~  499 (562)
                      .       ....++..|++||++.+ ..+...|||++.-
T Consensus       200 ~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~  238 (316)
T 2xir_A          200 KDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGV  238 (316)
T ss_dssp             TCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHH
T ss_pred             cCccceeccCCCcceeecCchhhccccccchhHHHHHHH
Confidence            3       23455667999998765 4566799988633

>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*

Probab=99.94  E-value=1.7e-27  Score=243.98  Aligned_cols=182  Identities=19%  Similarity=0.245  Sum_probs=139.9

Q ss_pred             CCCceeeeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCccccc
Q psy9184         261 SALKNCKKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTEL  334 (562)
Q Consensus       261 ~~y~~~~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~l  334 (562)
                      ++|++.+.||+|+||.||+|      +.||||++..................+.+|+.+++.++|               
T Consensus        10 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h---------------   74 (322)
T 2ycf_A           10 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNH---------------   74 (322)
T ss_dssp             HHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECC---------------CHHHHHHHHHHCCC---------------
T ss_pred             hceeEeeEEecCCCEEEEEEEEcCCCcEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhCCC---------------
Confidence            46899999999999999999      789999997643111001112233457899999999998               


Q ss_pred             ccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc---cCCHHHHHHHHHHHHHHHHH
Q psy9184         335 LKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK---YRSPNQTYAMILQVVFSLAV  411 (562)
Q Consensus       335 ~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~---~l~e~~i~~I~~QIl~aL~y  411 (562)
                                 |||+++++++..              +..|+||||+.+|++.+.+.   .+++.+++.++.||+.||.|
T Consensus        75 -----------~~i~~~~~~~~~--------------~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~  129 (322)
T 2ycf_A           75 -----------PCIIKIKNFFDA--------------EDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQY  129 (322)
T ss_dssp             -----------TTBCCEEEEEES--------------SSEEEEEECCTTEETHHHHSTTCCCCHHHHHHHHHHHHHHHHH
T ss_pred             -----------CCCceEeeEEcC--------------CceEEEEecCCCCcHHHHHhccCCCCHHHHHHHHHHHHHHHHH
Confidence                       999999988853              34899999999998877664   48999999999999999999


Q ss_pred             HHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecCC----cEEEeecCCCccccC--
Q psy9184         412 AEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVGE----KICYYDLSQDEELFE--  485 (562)
Q Consensus       412 LH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~~----g~v~~~l~~~pelF~--  485 (562)
                      ||+ .||+||||||+|||++.++..                 ..+||+|||+++.....    ...++..|++||++.  
T Consensus       130 lH~-~~ivH~dlkp~NIl~~~~~~~-----------------~~~kl~Dfg~~~~~~~~~~~~~~~gt~~y~aPE~~~~~  191 (322)
T 2ycf_A          130 LHE-NGIIHRDLKPENVLLSSQEED-----------------CLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVLVSV  191 (322)
T ss_dssp             HHH-TTEECCCCSGGGEEESSSSSS-----------------CCEEECCCTTCEECCCCHHHHHHHSCCTTCCHHHHHHT
T ss_pred             HHH-CCeeccCCCHHHEEEecCCCC-----------------CeEEEccCccceecccccccccccCCcCccCchhhccC
Confidence            999 799999999999999876521                 25999999999887542    233577899999873  


Q ss_pred             --CCCCcHHHHHHHhhc
Q psy9184         486 --GEGDYQFDMYRMMRK  500 (562)
Q Consensus       486 --g~~~~q~dIy~lm~~  500 (562)
                        +......|||++.-.
T Consensus       192 ~~~~~~~~~Di~slG~i  208 (322)
T 2ycf_A          192 GTAGYNRAVDCWSLGVI  208 (322)
T ss_dssp             TTTTCTTHHHHHHHHHH
T ss_pred             CCCCCCchhhHHHHHHH
Confidence              234567999886433

>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...

Probab=99.94  E-value=4.4e-27  Score=247.70  Aligned_cols=178  Identities=17%  Similarity=0.201  Sum_probs=138.1

Q ss_pred             ccccCCCCCCceeeeeeccCceEEEEE---------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccC
Q psy9184         254 FEDRYPSSALKNCKKIGEGVYGEVFKL---------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRT  324 (562)
Q Consensus       254 f~~~~~~~~y~~~~~LG~GsfG~Vyka---------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~  324 (562)
                      |...+...+|.+.+.||+|+||.||+|         ..||||+++...       .....+.+.+|+.+++.++|     
T Consensus        38 ~~~~~~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~~-------~~~~~~~~~~E~~~l~~l~h-----  105 (373)
T 2qol_A           38 FAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGY-------TEKQRRDFLGEASIMGQFDH-----  105 (373)
T ss_dssp             TSCBCCGGGCCCCEEEEECSSSEEEEC-CBCTTSCBCCEEEEECCTTC-------CHHHHHHHHHHHHHHTTCCC-----
T ss_pred             HHhhcCHhhceeeeEEeeCCCeEEEEEEEecCCCCceeEEEEEecCcc-------CHHHHHHHHHHHHHHHhCCC-----
Confidence            333344568999999999999999999         359999998643       23445688999999999988     


Q ss_pred             CCCCCcccccccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc----cCCHHHHHH
Q psy9184         325 ENSTPCFTELLKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK----YRSPNQTYA  400 (562)
Q Consensus       325 ~n~~p~fv~l~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~----~l~e~~i~~  400 (562)
                                           |||+++++++.+             .+.+|+||||++||++.+.+.    .+++.++..
T Consensus       106 ---------------------~niv~~~~~~~~-------------~~~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~  151 (373)
T 2qol_A          106 ---------------------PNIIRLEGVVTK-------------SKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVG  151 (373)
T ss_dssp             ---------------------TTBCCEEEEECS-------------SSSCEEEEECCTTCBHHHHHHTTTTCSCHHHHHH
T ss_pred             ---------------------CCCCeEEEEEee-------------CCceEEEEeCCCCCcHHHHHHhCCCCCCHHHHHH
Confidence                                 999999998875             457899999999998766653    388999999


Q ss_pred             HHHHHHHHHHHHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecCC--------cE
Q psy9184         401 MILQVVFSLAVAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVGE--------KI  472 (562)
Q Consensus       401 I~~QIl~aL~yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~~--------g~  472 (562)
                      ++.||+.||.|||+ .||+||||||+|||++.++                    .+||+|||+++.....        +.
T Consensus       152 i~~qi~~aL~~LH~-~~ivH~Dlkp~NIll~~~~--------------------~~kl~Dfg~a~~~~~~~~~~~~~~~~  210 (373)
T 2qol_A          152 MLRGIASGMKYLSD-MGYVHRDLAARNILINSNL--------------------VCKVSDFGLGRVLEDDPEAAYTTRGG  210 (373)
T ss_dssp             HHHHHHHHHHHHHH-TTCCCSCCCGGGEEECTTC--------------------CEEECCC-------------------
T ss_pred             HHHHHHHHHHHHHH-CCeeCCCCCcceEEEcCCC--------------------CEEECcCccccccccCCccceeccCC
Confidence            99999999999999 7999999999999998876                    7999999999876542        11


Q ss_pred             EEeecCCCccccCC-CCCcHHHHHHHh
Q psy9184         473 CYYDLSQDEELFEG-EGDYQFDMYRMM  498 (562)
Q Consensus       473 v~~~l~~~pelF~g-~~~~q~dIy~lm  498 (562)
                      ..+..|++||.+.+ ..+...|||++.
T Consensus       211 ~~~~~y~aPE~~~~~~~~~~~Dv~SlG  237 (373)
T 2qol_A          211 KIPIRWTSPEAIAYRKFTSASDVWSYG  237 (373)
T ss_dssp             ---CTTSCHHHHHHCCCCHHHHHHHHH
T ss_pred             CcCCCccChhhhccCCcCchhcHHHHH
Confidence            22446899998875 456679998854

>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*

Probab=99.94  E-value=1.2e-26  Score=239.81  Aligned_cols=229  Identities=15%  Similarity=0.140  Sum_probs=169.3

Q ss_pred             CCCCceeeeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCcccc
Q psy9184         260 SSALKNCKKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTE  333 (562)
Q Consensus       260 ~~~y~~~~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~  333 (562)
                      ..+|.+.+.||+|+||.||+|      +.||+|++....     .......+.+.+|+.+++.+.|              
T Consensus        40 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~-----~~~~~~~~~~~~E~~~l~~l~h--------------  100 (335)
T 2owb_A           40 RRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSL-----LLKPHQREKMSMEISIHRSLAH--------------  100 (335)
T ss_dssp             TEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGG-----CCSHHHHHHHHHHHHHHHTCCC--------------
T ss_pred             CCceEEEEEEeeCCCeEEEEEEECCCCCEEEEEEechhh-----hcCHHHHHHHHHHHHHHHhCCC--------------
Confidence            367999999999999999999      689999998653     1233455778899999999998              


Q ss_pred             cccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc---cCCHHHHHHHHHHHHHHHH
Q psy9184         334 LLKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK---YRSPNQTYAMILQVVFSLA  410 (562)
Q Consensus       334 l~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~---~l~e~~i~~I~~QIl~aL~  410 (562)
                                  |||+++++++.+             .+.+|+||||+.+|++.+.+.   .+++.+++.++.||+.||.
T Consensus       101 ------------~~iv~~~~~~~~-------------~~~~~lv~e~~~~~~L~~~~~~~~~l~~~~~~~i~~qi~~aL~  155 (335)
T 2owb_A          101 ------------QHVVGFHGFFED-------------NDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQ  155 (335)
T ss_dssp             ------------TTBCCEEEEEEC-------------SSEEEEEECCCTTCBHHHHHHHHCSCCHHHHHHHHHHHHHHHH
T ss_pred             ------------CCCCeEEEEEec-------------CCeEEEEEecCCCCCHHHHHhccCCCCHHHHHHHHHHHHHHHH
Confidence                        999999999875             558999999999987766553   4899999999999999999


Q ss_pred             HHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecCC-----cEEEeecCCCccccC
Q psy9184         411 VAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVGE-----KICYYDLSQDEELFE  485 (562)
Q Consensus       411 yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~~-----g~v~~~l~~~pelF~  485 (562)
                      |||+ .||+||||||+|||++.++                    .+||+|||+++.....     ...++..|++||++.
T Consensus       156 ~LH~-~~ivH~dlkp~NIl~~~~~--------------------~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~  214 (335)
T 2owb_A          156 YLHR-NRVIHRDLKLGNLFLNEDL--------------------EVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLS  214 (335)
T ss_dssp             HHHH-TTEECSCCCGGGEEECTTC--------------------CEEECCCTTCEECCSTTCCBCCCCSCCSSCCHHHHH
T ss_pred             HHHH-CCCEecCCCchhEEEcCCC--------------------CEEEeeccCceecccCcccccccCCCccccCHHHhc
Confidence            9999 7999999999999999886                    7999999999876532     234567789999887


Q ss_pred             CC-CCcHHHHHHHhhcccCCCCCCCCCCChhhhHHHHHHHHhhcccCCCCCCCchhHHHHHHHHHHHhcCCCcCcCC
Q psy9184         486 GE-GDYQFDMYRMMRKQCQNNWQNFTPKNNVFWIHYLVDKATCLKKGYQYLRAPRHQAFELLEELGQNALHFDSCYE  561 (562)
Q Consensus       486 g~-~~~q~dIy~lm~~~~~~~W~~~~P~tn~~wl~yl~~~Ll~~~~~~~~~~~~~~~~~~~l~~l~~~~l~~~s~~~  561 (562)
                      +. .....|||++.-... ..+.+..|+....... ....+......++..      .-..+.+|...+|..+...|
T Consensus       215 ~~~~~~~~Di~slG~il~-~l~~g~~pf~~~~~~~-~~~~~~~~~~~~~~~------~~~~~~~li~~~l~~dp~~R  283 (335)
T 2owb_A          215 KKGHSFEVDVWSIGCIMY-TLLVGKPPFETSCLKE-TYLRIKKNEYSIPKH------INPVAASLIQKMLQTDPTAR  283 (335)
T ss_dssp             TSCBCTHHHHHHHHHHHH-HHHHSSCTTCCSSHHH-HHHHHHHTCCCCCTT------SCHHHHHHHHHHTCSSGGGS
T ss_pred             cCCCCchhhHHHHHHHHH-HHHHCcCCCCCCCHHH-HHHHHhcCCCCCCcc------CCHHHHHHHHHHccCChhHC
Confidence            74 455699988643332 3334444543322111 112222211122211      12356677888888776654

>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*

Probab=99.94  E-value=7.8e-27  Score=240.50  Aligned_cols=189  Identities=20%  Similarity=0.245  Sum_probs=141.0

Q ss_pred             CCCceeeeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCccccc
Q psy9184         261 SALKNCKKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTEL  334 (562)
Q Consensus       261 ~~y~~~~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~l  334 (562)
                      ++|++.++||+|+||.||+|      +.||||++....      ........+.+|+.+++.++|               
T Consensus        34 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~------~~~~~~~~~~~E~~~l~~l~h---------------   92 (329)
T 3gbz_A           34 DRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEH------EEEGVPGTAIREVSLLKELQH---------------   92 (329)
T ss_dssp             GGEEEEEEEEECSSSEEEEEEETTTTEEEEEEECCCCC--------------CHHHHHHGGGCCC---------------
T ss_pred             hhEEEEEEEEecCCeEEEEEEECCCCceEEEEEEcccc------cccccchhHHHHHHHHHHcCC---------------
Confidence            57999999999999999999      799999997653      123334567899999999988               


Q ss_pred             ccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc---cCCHHHHHHHHHHHHHHHHH
Q psy9184         335 LKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK---YRSPNQTYAMILQVVFSLAV  411 (562)
Q Consensus       335 ~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~---~l~e~~i~~I~~QIl~aL~y  411 (562)
                                 |||+++++++.+             ++.+|+||||+. |++.+.+.   .+++.+++.++.||+.||.|
T Consensus        93 -----------~~iv~~~~~~~~-------------~~~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~i~~ql~~~l~~  147 (329)
T 3gbz_A           93 -----------RNIIELKSVIHH-------------NHRLHLIFEYAE-NDLKKYMDKNPDVSMRVIKSFLYQLINGVNF  147 (329)
T ss_dssp             -----------TTBCCEEEEEEE-------------TTEEEEEEECCS-EEHHHHHHHCTTCCHHHHHHHHHHHHHHHHH
T ss_pred             -----------CCcceEEEEEec-------------CCEEEEEEecCC-CCHHHHHhhcCCCCHHHHHHHHHHHHHHHHH
Confidence                       999999999876             558999999998 45655543   48999999999999999999


Q ss_pred             HHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecC-----CcEEEeecCCCccccCC
Q psy9184         412 AEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVG-----EKICYYDLSQDEELFEG  486 (562)
Q Consensus       412 LH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~-----~g~v~~~l~~~pelF~g  486 (562)
                      ||+ .||+||||||+|||++.++..               ....+||+|||+|+....     ...+++..|++||++.+
T Consensus       148 LH~-~~ivH~Dlkp~NIll~~~~~~---------------~~~~~kl~Dfg~a~~~~~~~~~~~~~~~t~~y~aPE~~~~  211 (329)
T 3gbz_A          148 CHS-RRCLHRDLKPQNLLLSVSDAS---------------ETPVLKIGDFGLARAFGIPIRQFTHEIITLWYRPPEILLG  211 (329)
T ss_dssp             HHH-TTCCCSCCCGGGEEEEC--------------------CCEEEECCTTHHHHHC-----------CCTTCCHHHHTT
T ss_pred             HHh-CCEECCCCCHHHEEEecCCCC---------------ccceEEECcCCCccccCCcccccCCCcCCccccCHHHhcC
Confidence            999 799999999999999755410               012699999999976542     33455788999999877


Q ss_pred             C--CCcHHHHHHHhhcccCCCCCCCCCC
Q psy9184         487 E--GDYQFDMYRMMRKQCQNNWQNFTPK  512 (562)
Q Consensus       487 ~--~~~q~dIy~lm~~~~~~~W~~~~P~  512 (562)
                      .  .....|||++.-... ..+.+..|+
T Consensus       212 ~~~~~~~~DiwslG~il~-ell~g~~pf  238 (329)
T 3gbz_A          212 SRHYSTSVDIWSIACIWA-EMLMKTPLF  238 (329)
T ss_dssp             CCCCCTHHHHHHHHHHHH-HHHHSSCSS
T ss_pred             CCCCCcHHHHHHHHHHHH-HHHHCCCCc
Confidence            3  466799998643332 333344444

>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A

Probab=99.94  E-value=4.3e-27  Score=246.70  Aligned_cols=237  Identities=16%  Similarity=0.177  Sum_probs=170.0

Q ss_pred             CCCceeeeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhc-CCccccCCCCCCcccc
Q psy9184         261 SALKNCKKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKET-SDLQYRTENSTPCFTE  333 (562)
Q Consensus       261 ~~y~~~~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L-~h~~~~~~n~~p~fv~  333 (562)
                      ++|.+.+.||+|+||.||+|      +.||||++................+.+.+|+.+++.+ +|              
T Consensus        94 ~~y~~~~~lg~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h--------------  159 (365)
T 2y7j_A           94 QKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGH--------------  159 (365)
T ss_dssp             HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHTTC--------------
T ss_pred             hhcccceEEecCCCEEEEEEEECCCCcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhcCC--------------
Confidence            45899999999999999999      6999999987542222222234456788999999999 56              


Q ss_pred             cccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc---cCCHHHHHHHHHHHHHHHH
Q psy9184         334 LLKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK---YRSPNQTYAMILQVVFSLA  410 (562)
Q Consensus       334 l~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~---~l~e~~i~~I~~QIl~aL~  410 (562)
                                  |||++++++|..             .+..|+||||+.||++.+.+.   .+++..+..++.||+.||.
T Consensus       160 ------------p~iv~~~~~~~~-------------~~~~~lv~e~~~g~~L~~~l~~~~~l~~~~~~~i~~qi~~~L~  214 (365)
T 2y7j_A          160 ------------PHIITLIDSYES-------------SSFMFLVFDLMRKGELFDYLTEKVALSEKETRSIMRSLLEAVS  214 (365)
T ss_dssp             ------------TTBCCEEEEEEB-------------SSEEEEEECCCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHH
T ss_pred             ------------CCEeEEEEEEee-------------CCEEEEEEEeCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHH
Confidence                        999999998875             558999999999998776654   4899999999999999999


Q ss_pred             HHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecC----CcEEEeecCCCccccCC
Q psy9184         411 VAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVG----EKICYYDLSQDEELFEG  486 (562)
Q Consensus       411 yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~----~g~v~~~l~~~pelF~g  486 (562)
                      |||+ .||+||||||+|||++.++                    .++|+|||+++....    ....++..|++||++.+
T Consensus       215 ~LH~-~gi~H~Dlkp~NIl~~~~~--------------------~ikl~DfG~~~~~~~~~~~~~~~gt~~y~aPE~~~~  273 (365)
T 2y7j_A          215 FLHA-NNIVHRDLKPENILLDDNM--------------------QIRLSDFGFSCHLEPGEKLRELCGTPGYLAPEILKC  273 (365)
T ss_dssp             HHHH-TTEECSCCSGGGEEECTTC--------------------CEEECCCTTCEECCTTCCBCCCCSCGGGCCHHHHHH
T ss_pred             HHHh-CCeecCCCCHHHEEECCCC--------------------CEEEEecCcccccCCCcccccCCCCCCccChhhccc
Confidence            9999 7999999999999999886                    799999999987654    23345778999998864


Q ss_pred             C-------CCcHHHHHHHhhcccCCCCCCCCCCChhhhHHHHHHHHhhcccCCCCCCCchhHHHHHHHHHHHhcCCCcCc
Q psy9184         487 E-------GDYQFDMYRMMRKQCQNNWQNFTPKNNVFWIHYLVDKATCLKKGYQYLRAPRHQAFELLEELGQNALHFDSC  559 (562)
Q Consensus       487 ~-------~~~q~dIy~lm~~~~~~~W~~~~P~tn~~wl~yl~~~Ll~~~~~~~~~~~~~~~~~~~l~~l~~~~l~~~s~  559 (562)
                      .       .+...|||++.-... ..+.+..|+....-... ...+..  ..+..........-..+..|...+|.++..
T Consensus       274 ~~~~~~~~~~~~~Di~slG~il~-ell~g~~pf~~~~~~~~-~~~i~~--~~~~~~~~~~~~~~~~~~~li~~~L~~dP~  349 (365)
T 2y7j_A          274 SMDETHPGYGKEVDLWACGVILF-TLLAGSPPFWHRRQILM-LRMIME--GQYQFSSPEWDDRSSTVKDLISRLLQVDPE  349 (365)
T ss_dssp             TTCTTSCCBCTTHHHHHHHHHHH-HHHHSSCSSCCSSHHHH-HHHHHH--TCCCCCHHHHSSSCHHHHHHHHHHSCSSTT
T ss_pred             cccccCcCCCchhhHHhHHHHHH-HHHHCCCCCCCCCHHHH-HHHHHh--CCCCCCCcccccCCHHHHHHHHHHcCCChh
Confidence            2       345689988543332 33344445432211111 122222  111111100001134678888999998877


Q ss_pred             CC
Q psy9184         560 YE  561 (562)
Q Consensus       560 ~~  561 (562)
                      .|
T Consensus       350 ~R  351 (365)
T 2y7j_A          350 AR  351 (365)
T ss_dssp             TS
T ss_pred             HC
Confidence            65

>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*

Probab=99.94  E-value=1e-26  Score=238.61  Aligned_cols=173  Identities=18%  Similarity=0.214  Sum_probs=144.0

Q ss_pred             CCCCCceeeeeeccCceEEEEE-----------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhc-CCccccCCC
Q psy9184         259 PSSALKNCKKIGEGVYGEVFKL-----------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKET-SDLQYRTEN  326 (562)
Q Consensus       259 ~~~~y~~~~~LG~GsfG~Vyka-----------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L-~h~~~~~~n  326 (562)
                      +.++|++.+.||+|+||.||+|           ..||+|++....       .....+.+.+|+.+++.+ +|       
T Consensus        44 ~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~-------~~~~~~~~~~E~~~l~~l~~h-------  109 (333)
T 2i1m_A           44 PRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTA-------HADEKEALMSELKIMSHLGQH-------  109 (333)
T ss_dssp             CTTSEEEEEEEEECSSEEEEEEEETTCSSSCCCCEEEEEEECTTC-------CHHHHHHHHHHHHHHHHHCCC-------
T ss_pred             CHHHceeeeEeccCCCcceEEEEecCCCcccchhHHHHHhccccc-------ChHHHHHHHHHHHHHHhhcCC-------
Confidence            4578999999999999999999           269999998643       234456789999999999 66       


Q ss_pred             CCCcccccccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc---------------
Q psy9184         327 STPCFTELLKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK---------------  391 (562)
Q Consensus       327 ~~p~fv~l~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~---------------  391 (562)
                                         |||+++++++..             ++.+|+||||+++|++.+.+.               
T Consensus       110 -------------------~~iv~~~~~~~~-------------~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~  157 (333)
T 2i1m_A          110 -------------------ENIVNLLGACTH-------------GGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIA  157 (333)
T ss_dssp             -------------------TTBCCEEEEECS-------------SSSCEEEEECCTTEEHHHHHHHHHHHHSCC------
T ss_pred             -------------------CCeeeEEEEEec-------------CCceEEEEecCCCCcHHHHHHHhccccccccccccc
Confidence                               999999998875             457899999999998866553               


Q ss_pred             --cCCHHHHHHHHHHHHHHHHHHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecC
Q psy9184         392 --YRSPNQTYAMILQVVFSLAVAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVG  469 (562)
Q Consensus       392 --~l~e~~i~~I~~QIl~aL~yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~  469 (562)
                        .+++..++.++.||+.||.|||+ .||+||||||+|||++.++                    .+||+|||+|+....
T Consensus       158 ~~~~~~~~~~~~~~qi~~~l~~lH~-~~ivH~Dlkp~NIl~~~~~--------------------~~kl~Dfg~~~~~~~  216 (333)
T 2i1m_A          158 NSTASTRDLLHFSSQVAQGMAFLAS-KNCIHRDVAARNVLLTNGH--------------------VAKIGDFGLARDIMN  216 (333)
T ss_dssp             -CCCCHHHHHHHHHHHHHHHHHHHH-TTEECSCCSGGGCEEEGGG--------------------EEEBCCCGGGCCGGG
T ss_pred             ccccCHHHHHHHHHHHHHHHHHHhc-CCcccCCcccceEEECCCC--------------------eEEECcccccccccc
Confidence              26899999999999999999999 7999999999999998876                    799999999986543


Q ss_pred             -------CcEEEeecCCCccccCC-CCCcHHHHHHHh
Q psy9184         470 -------EKICYYDLSQDEELFEG-EGDYQFDMYRMM  498 (562)
Q Consensus       470 -------~g~v~~~l~~~pelF~g-~~~~q~dIy~lm  498 (562)
                             ....++..|++||++.+ ..+...|||++.
T Consensus       217 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG  253 (333)
T 2i1m_A          217 DSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYG  253 (333)
T ss_dssp             CTTSEECSSCEECGGGSCHHHHHHCCCCHHHHHHHHH
T ss_pred             ccceeecCCCCCCccccCHHHhccCCCChHHHHHHHH
Confidence                   23445567999998765 456679998863

>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...

Probab=99.94  E-value=6.7e-27  Score=234.73  Aligned_cols=229  Identities=14%  Similarity=0.180  Sum_probs=168.5

Q ss_pred             CCCCceeeeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCcccc
Q psy9184         260 SSALKNCKKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTE  333 (562)
Q Consensus       260 ~~~y~~~~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~  333 (562)
                      .++|++.+.||+|+||.||+|      ..||+|++....     .........+.+|+.+++.++|              
T Consensus        13 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~-----~~~~~~~~~~~~e~~~l~~l~h--------------   73 (284)
T 2vgo_A           13 IDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQ-----LEKEGVEHQLRREIEIQSHLRH--------------   73 (284)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHH-----HHHTTCHHHHHHHHHHHHTCCC--------------
T ss_pred             hhhceeeheecCCCCeEEEEEEEcCCCcEEEEEEEcccc-----cchHHHHHHHHHHHHHHhcCCC--------------
Confidence            367999999999999999999      689999997532     1112234678899999999998              


Q ss_pred             cccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc---cCCHHHHHHHHHHHHHHHH
Q psy9184         334 LLKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK---YRSPNQTYAMILQVVFSLA  410 (562)
Q Consensus       334 l~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~---~l~e~~i~~I~~QIl~aL~  410 (562)
                                  |||+++++++.+             .+..|+||||+.+|++.+.+.   .+++..++.++.||+.||.
T Consensus        74 ------------~~i~~~~~~~~~-------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~  128 (284)
T 2vgo_A           74 ------------PNILRMYNYFHD-------------RKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADALH  128 (284)
T ss_dssp             ------------TTBCCEEEEEEC-------------SSEEEEEECCCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHH
T ss_pred             ------------CCEeeEEEEEEc-------------CCEEEEEEEeCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHH
Confidence                        999999999875             558999999999988876664   4899999999999999999


Q ss_pred             HHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecC---CcEEEeecCCCccccCCC
Q psy9184         411 VAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVG---EKICYYDLSQDEELFEGE  487 (562)
Q Consensus       411 yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~---~g~v~~~l~~~pelF~g~  487 (562)
                      |||+ .||+||||||+|||++.++                    .++|+|||++.....   ....++..|++||++.+.
T Consensus       129 ~lH~-~~i~H~dl~p~Nil~~~~~--------------------~~kl~Dfg~~~~~~~~~~~~~~~~~~y~aPE~~~~~  187 (284)
T 2vgo_A          129 YCHE-RKVIHRDIKPENLLMGYKG--------------------ELKIADFGWSVHAPSLRRRTMCGTLDYLPPEMIEGK  187 (284)
T ss_dssp             HHHT-TTEECCCCSGGGEEECTTC--------------------CEEECCCTTCEECSSSCBCCCCSCGGGCCHHHHTTC
T ss_pred             HHHH-CCceecCCCHHHEEEcCCC--------------------CEEEecccccccCcccccccccCCCCcCCHHHhccC
Confidence            9999 7999999999999998876                    799999999976653   233457788999988874


Q ss_pred             -CCcHHHHHHHhhcccCCCCCCCCCCChhhhHHHHHHHHhhcccCCCCCCCchhHHHHHHHHHHHhcCCCcCcCC
Q psy9184         488 -GDYQFDMYRMMRKQCQNNWQNFTPKNNVFWIHYLVDKATCLKKGYQYLRAPRHQAFELLEELGQNALHFDSCYE  561 (562)
Q Consensus       488 -~~~q~dIy~lm~~~~~~~W~~~~P~tn~~wl~yl~~~Ll~~~~~~~~~~~~~~~~~~~l~~l~~~~l~~~s~~~  561 (562)
                       .+...|||++..... ..+.+..|+.... .......+......++..-      -..+.+|...+|..+...|
T Consensus       188 ~~~~~~Di~slG~il~-~l~~g~~pf~~~~-~~~~~~~~~~~~~~~~~~~------~~~~~~li~~~l~~~p~~R  254 (284)
T 2vgo_A          188 THDEKVDLWCAGVLCY-EFLVGMPPFDSPS-HTETHRRIVNVDLKFPPFL------SDGSKDLISKLLRYHPPQR  254 (284)
T ss_dssp             CBCTTHHHHHHHHHHH-HHHHSSCTTCCSS-HHHHHHHHHTTCCCCCTTS------CHHHHHHHHHHSCSSGGGS
T ss_pred             CCCcccchhhHHHHHH-HHHHCCCCCCCCC-HhHHHHHHhccccCCCCcC------CHHHHHHHHHHhhcCHhhC
Confidence             455699988643332 2333444443221 1111222332122222211      2356777888888776654

>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...

Probab=99.94  E-value=1.4e-26  Score=233.79  Aligned_cols=172  Identities=17%  Similarity=0.184  Sum_probs=140.3

Q ss_pred             CCCceeeeeeccCceEEEEE---------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCcc
Q psy9184         261 SALKNCKKIGEGVYGEVFKL---------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCF  331 (562)
Q Consensus       261 ~~y~~~~~LG~GsfG~Vyka---------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~f  331 (562)
                      .+|++.+.||+|+||.||+|         ..+|+|.+....       .....+.+.+|+.+++.++|            
T Consensus        25 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~avk~~~~~~-------~~~~~~~~~~E~~~l~~l~h------------   85 (298)
T 3f66_A           25 LIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRIT-------DIGEVSQFLTEGIIMKDFSH------------   85 (298)
T ss_dssp             EEEEEEEEEEEETTEEEEEEEEC-----CEEEEEEEETTCC-------SHHHHHHHHHHHHHHHTCCC------------
T ss_pred             eehhhcceeeecCCceEEEEEEecCCCceeEEEEEecccCC-------CHHHHHHHHHHHHHHHhCCC------------
Confidence            45889999999999999999         258999987532       34455778999999999998            


Q ss_pred             cccccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc----cCCHHHHHHHHHHHHH
Q psy9184         332 TELLKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK----YRSPNQTYAMILQVVF  407 (562)
Q Consensus       332 v~l~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~----~l~e~~i~~I~~QIl~  407 (562)
                                    |||+++++++..            .++..|+||||+.+|++.+.+.    .+++.+++.++.||+.
T Consensus        86 --------------~~iv~~~~~~~~------------~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~ql~~  139 (298)
T 3f66_A           86 --------------PNVLSLLGICLR------------SEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAK  139 (298)
T ss_dssp             --------------TTBCCCCEEECC------------SSSCCEEEEECCTTCBHHHHHHCTTCCCCHHHHHHHHHHHHH
T ss_pred             --------------CCEeeeeeEEEc------------CCCceEEEEeCCCCCCHHHHHHhcccCCCHHHHHHHHHHHHH
Confidence                          999999988543            2457899999999998876663    3789999999999999


Q ss_pred             HHHHHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecC---------CcEEEeecC
Q psy9184         408 SLAVAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVG---------EKICYYDLS  478 (562)
Q Consensus       408 aL~yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~---------~g~v~~~l~  478 (562)
                      ||.|||+ .||+||||||+|||++.++                    .+||+|||+|+....         .+..++..|
T Consensus       140 ~l~~lH~-~~i~H~dikp~Nil~~~~~--------------------~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~y  198 (298)
T 3f66_A          140 GMKYLAS-KKFVHRDLAARNCMLDEKF--------------------TVKVADFGLARDMYDKEYYSVHNKTGAKLPVKW  198 (298)
T ss_dssp             HHHHHHH-TTCCCSCCSGGGEEECTTC--------------------CEEECSCGGGCCCSCGGGCBC-----CCBCGGG
T ss_pred             HHHHHHh-CCccCCCCchheEEECCCC--------------------CEEECcccccccccccchhccccccCCCCCccc
Confidence            9999999 7999999999999998876                    799999999986543         222334568


Q ss_pred             CCccccCC-CCCcHHHHHHHh
Q psy9184         479 QDEELFEG-EGDYQFDMYRMM  498 (562)
Q Consensus       479 ~~pelF~g-~~~~q~dIy~lm  498 (562)
                      ++||.+.+ ..+...|||++.
T Consensus       199 ~aPE~~~~~~~~~~~Di~slG  219 (298)
T 3f66_A          199 MALESLQTQKFTTKSDVWSFG  219 (298)
T ss_dssp             SCHHHHHHCCCCHHHHHHHHH
T ss_pred             cChHHhcCCCCChHHHHHHHH
Confidence            89998876 456668998854

>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0

Probab=99.94  E-value=6.3e-27  Score=232.71  Aligned_cols=240  Identities=16%  Similarity=0.152  Sum_probs=156.7

Q ss_pred             CCCCceeeeeeccCceEEEEE----eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCcccccc
Q psy9184         260 SSALKNCKKIGEGVYGEVFKL----NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTELL  335 (562)
Q Consensus       260 ~~~y~~~~~LG~GsfG~Vyka----~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~l~  335 (562)
                      .++|++.+.||+|+||.||+|    ..||+|++.....    .......+.+.+|+.+++.++|                
T Consensus         6 ~~~~~~~~~lg~G~~g~V~~~~~~~~~vavK~~~~~~~----~~~~~~~~~~~~e~~~l~~l~h----------------   65 (271)
T 3dtc_A            6 FAELTLEEIIGIGGFGKVYRAFWIGDEVAVKAARHDPD----EDISQTIENVRQEAKLFAMLKH----------------   65 (271)
T ss_dssp             TTSEEEEEEEEEETTEEEEEEEETTEEEEEEEC--------------CHHHHHHHHHHHHHCCC----------------
T ss_pred             hhheeeeeeeccCCCeEEEEEEEcCCeEEEEEEecCCc----ccHHHHHHHHHHHHHHHHhcCC----------------
Confidence            478999999999999999999    8999999886531    1123345678899999999998                


Q ss_pred             cccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc--cCCHHHHHHHHHHHHHHHHHHH
Q psy9184         336 KCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK--YRSPNQTYAMILQVVFSLAVAE  413 (562)
Q Consensus       336 ~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~--~l~e~~i~~I~~QIl~aL~yLH  413 (562)
                                |||+++++++.+             ++..|+||||+.||++.+.+.  .+++..++.++.||+.||.|||
T Consensus        66 ----------~~i~~~~~~~~~-------------~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~i~~~l~~~l~~lH  122 (271)
T 3dtc_A           66 ----------PNIIALRGVCLK-------------EPNLCLVMEFARGGPLNRVLSGKRIPPDILVNWAVQIARGMNYLH  122 (271)
T ss_dssp             ----------TTBCCEEEEECC-------------C--CEEEEECCTTEEHHHHHTSSCCCHHHHHHHHHHHHHHHHHHH
T ss_pred             ----------CCEeeEEEEEec-------------CCceEEEEEcCCCCCHHHHhhcCCCCHHHHHHHHHHHHHHHHHHH
Confidence                      999999998875             457899999999887655543  4899999999999999999999


Q ss_pred             hhCC---eEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecC---CcEEEeecCCCccccCCC
Q psy9184         414 VELE---FEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVG---EKICYYDLSQDEELFEGE  487 (562)
Q Consensus       414 ~~~~---IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~---~g~v~~~l~~~pelF~g~  487 (562)
                      + .|   |+||||||+|||++......            ......++|+|||+++....   ....++..|++||.+.+.
T Consensus       123 ~-~~~~~i~H~dikp~Nil~~~~~~~~------------~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~y~aPE~~~~~  189 (271)
T 3dtc_A          123 D-EAIVPIIHRDLKSSNILILQKVENG------------DLSNKILKITDFGLAREWHRTTKMSAAGAYAWMAPEVIRAS  189 (271)
T ss_dssp             H-SSSSCCCCSCCSGGGEEESSCCSSS------------CCSSCCEEECCCCC-------------CCGGGSCHHHHHHC
T ss_pred             h-CCCCceeecCCchHHEEEecccccc------------cccCcceEEccCCcccccccccccCCCCccceeCHHHhccC
Confidence            9 68   99999999999998743100            00112799999999986554   234567789999988764


Q ss_pred             -CCcHHHHHHHhhcccCCCCCCCCCCChhhhHHHHHHHHhhcccCCCCCCCchhHHHHHHHHHHHhcCCCcCcCC
Q psy9184         488 -GDYQFDMYRMMRKQCQNNWQNFTPKNNVFWIHYLVDKATCLKKGYQYLRAPRHQAFELLEELGQNALHFDSCYE  561 (562)
Q Consensus       488 -~~~q~dIy~lm~~~~~~~W~~~~P~tn~~wl~yl~~~Ll~~~~~~~~~~~~~~~~~~~l~~l~~~~l~~~s~~~  561 (562)
                       .+...|||++.-... ..+.+..|+............... ...++.+.    ..-..+.+|...+|..+...|
T Consensus       190 ~~~~~~Di~slG~~l~-~l~~g~~p~~~~~~~~~~~~~~~~-~~~~~~~~----~~~~~~~~li~~~l~~~p~~R  258 (271)
T 3dtc_A          190 MFSKGSDVWSYGVLLW-ELLTGEVPFRGIDGLAVAYGVAMN-KLALPIPS----TCPEPFAKLMEDCWNPDPHSR  258 (271)
T ss_dssp             CCSHHHHHHHHHHHHH-HHHHCCCTTTTSCHHHHHHHHHTS-CCCCCCCT----TCCHHHHHHHHHHTCSSGGGS
T ss_pred             CCCchhhHHHHHHHHH-HHHhCCCCCCCCCHHHHHHhhhcC-CCCCCCCc----ccCHHHHHHHHHHhcCCcccC
Confidence             566699988644332 223334444332211111111111 11111111    112356666777777665544

>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}

Probab=99.94  E-value=1.3e-26  Score=235.67  Aligned_cols=243  Identities=15%  Similarity=0.140  Sum_probs=167.3

Q ss_pred             CCCCceeeeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcC---CccccCCCCCCc
Q psy9184         260 SSALKNCKKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETS---DLQYRTENSTPC  330 (562)
Q Consensus       260 ~~~y~~~~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~---h~~~~~~n~~p~  330 (562)
                      .++|++.++||+|+||.||+|      +.||||++.........   ......+.+|+.+++.+.   |           
T Consensus         8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~---~~~~~~~~~e~~~l~~l~~~~h-----------   73 (308)
T 3g33_A            8 TSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGG---GGLPISTVREVALLRRLEAFEH-----------   73 (308)
T ss_dssp             --CCEEEEEECCSSSCCEEEEECTTTCCEEEEEEEEEECCCTTS---SCCCHHHHHHHHHHHHHHHHCC-----------
T ss_pred             ccceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEecccccccc---cccchhHHHHHHHHHHHhhcCC-----------
Confidence            478999999999999999999      78999999864321111   111234567888777766   6           


Q ss_pred             ccccccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCcccccc-----CCHHHHHHHHHHH
Q psy9184         331 FTELLKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIKY-----RSPNQTYAMILQV  405 (562)
Q Consensus       331 fv~l~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~~-----l~e~~i~~I~~QI  405 (562)
                                     |||+++++++.....        .....+++||||+. |++.+.+..     +++.+++.++.||
T Consensus        74 ---------------~niv~~~~~~~~~~~--------~~~~~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~i~~qi  129 (308)
T 3g33_A           74 ---------------PNVVRLMDVCATSRT--------DREIKVTLVFEHVD-QDLRTYLDKAPPPGLPAETIKDLMRQF  129 (308)
T ss_dssp             ---------------TTBCCEEEEEEECCS--------SSEEEEEEEEECCC-CBHHHHHHTCCTTCSCHHHHHHHHHHH
T ss_pred             ---------------CCeEEeeeeeeccCC--------CCceeEEEEehhhh-cCHHHHHhhccCCCCCHHHHHHHHHHH
Confidence                           999999998875220        01226899999997 556555532     8999999999999


Q ss_pred             HHHHHHHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecC----CcEEEeecCCCc
Q psy9184         406 VFSLAVAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVG----EKICYYDLSQDE  481 (562)
Q Consensus       406 l~aL~yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~----~g~v~~~l~~~p  481 (562)
                      +.||+|||+ .||+||||||+|||++.++                    .+||+|||+|+....    ....++..|++|
T Consensus       130 ~~al~~lH~-~~ivH~Dlkp~Nil~~~~~--------------------~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aP  188 (308)
T 3g33_A          130 LRGLDFLHA-NCIVHRDLKPENILVTSGG--------------------TVKLADFGLARIYSYQMALTPVVVTLWYRAP  188 (308)
T ss_dssp             HHHHHHHHH-TTCCCSCCCTTTEEECTTS--------------------CEEECSCSCTTTSTTCCCSGGGGCCCSSCCH
T ss_pred             HHHHHHHHH-CCcccCCCCHHHEEEcCCC--------------------CEEEeeCccccccCCCcccCCccccccccCc
Confidence            999999999 7999999999999998886                    799999999986543    233457789999


Q ss_pred             cccCC-CCCcHHHHHHHhhcccCCCCCCCCCCChhh---hHHHHHHHHhhc-cc-----------CCCCCCCch-hH---
Q psy9184         482 ELFEG-EGDYQFDMYRMMRKQCQNNWQNFTPKNNVF---WIHYLVDKATCL-KK-----------GYQYLRAPR-HQ---  541 (562)
Q Consensus       482 elF~g-~~~~q~dIy~lm~~~~~~~W~~~~P~tn~~---wl~yl~~~Ll~~-~~-----------~~~~~~~~~-~~---  541 (562)
                      |++.+ ..+...|||++.-. ....+.+..|+....   .+..+...+-.. ..           .|+...... ..   
T Consensus       189 E~~~~~~~~~~~DiwslG~i-l~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  267 (308)
T 3g33_A          189 EVLLQSTYATPVDMWSVGCI-FAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWPRDVSLPRGAFPPRGPRPVQSVVP  267 (308)
T ss_dssp             HHHHTSCCCSTHHHHHHHHH-HHHTTTSSCSCCCSSHHHHHHHHHHHHCCCCTTTSCSSCSSCGGGSCCCCCCCHHHHSC
T ss_pred             hHHcCCCCCchHHHHHHHHH-HHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhccchhhccccccCCCCCCcHHHhCc
Confidence            98865 56667999886543 444556666664322   222222221110 00           011111111 11   


Q ss_pred             -HHHHHHHHHHhcCCCcCcCCC
Q psy9184         542 -AFELLEELGQNALHFDSCYEM  562 (562)
Q Consensus       542 -~~~~l~~l~~~~l~~~s~~~~  562 (562)
                       .-..+.+|...||.++...|.
T Consensus       268 ~~~~~~~~li~~~L~~dP~~R~  289 (308)
T 3g33_A          268 EMEESGAQLLLEMLTFNPHKRI  289 (308)
T ss_dssp             SCCHHHHHHHHHHTCSSTTTSC
T ss_pred             cccHHHHHHHHHHhcCCCccCC
Confidence             145778899999999988763

>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...

Probab=99.94  E-value=9.3e-27  Score=242.09  Aligned_cols=176  Identities=22%  Similarity=0.277  Sum_probs=146.8

Q ss_pred             CCCCCceeeeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCccc
Q psy9184         259 PSSALKNCKKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFT  332 (562)
Q Consensus       259 ~~~~y~~~~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv  332 (562)
                      ..++|++.+.||+|+||.||+|      ..||+|++....       .....+.+.+|+.+++.++|             
T Consensus        31 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~va~K~~~~~~-------~~~~~~~~~~E~~~l~~l~h-------------   90 (360)
T 3eqc_A           31 KDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEI-------KPAIRNQIIRELQVLHECNS-------------   90 (360)
T ss_dssp             CGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEECCC-------CHHHHHHHHHHHGGGGGCCC-------------
T ss_pred             ccccceeeeeecCCCCeEEEEEEECCCCcEEEEEEecccc-------CHHHHHHHHHHHHHHHHCCC-------------
Confidence            3467999999999999999999      789999998653       23445678999999999988             


Q ss_pred             ccccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc---cCCHHHHHHHHHHHHHHH
Q psy9184         333 ELLKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK---YRSPNQTYAMILQVVFSL  409 (562)
Q Consensus       333 ~l~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~---~l~e~~i~~I~~QIl~aL  409 (562)
                                   |||+++++++.+             ++.+|+||||++||++.+.+.   .+++..+..++.||+.||
T Consensus        91 -------------~~iv~~~~~~~~-------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~~i~~~l  144 (360)
T 3eqc_A           91 -------------PYIVGFYGAFYS-------------DGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGL  144 (360)
T ss_dssp             -------------TTBCCEEEEEEE-------------TTEEEEEECCCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHH
T ss_pred             -------------CCEEEEeEEEEE-------------CCEEEEEEECCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHH
Confidence                         999999998875             558999999999998766654   489999999999999999


Q ss_pred             HHHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecC---CcEEEeecCCCccccCC
Q psy9184         410 AVAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVG---EKICYYDLSQDEELFEG  486 (562)
Q Consensus       410 ~yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~---~g~v~~~l~~~pelF~g  486 (562)
                      .|||+.+||+||||||+|||++.++                    .++|+|||+|+....   ....++..|++||++.+
T Consensus       145 ~~lh~~~~i~H~dlkp~Nil~~~~~--------------------~~kl~Dfg~~~~~~~~~~~~~~gt~~y~aPE~~~~  204 (360)
T 3eqc_A          145 TYLREKHKIMHRDVKPSNILVNSRG--------------------EIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQG  204 (360)
T ss_dssp             HHHHHHHCCCCSCCSGGGEEECTTC--------------------CEEECCCCCCHHHHHHC----CCCCTTCCHHHHTT
T ss_pred             HHHHHhCCEEcCCccHHHEEECCCC--------------------CEEEEECCCCcccccccccCCCCCCCeECHHHHcC
Confidence            9999944999999999999999886                    799999999975432   33455778999999887


Q ss_pred             C-CCcHHHHHHHhhc
Q psy9184         487 E-GDYQFDMYRMMRK  500 (562)
Q Consensus       487 ~-~~~q~dIy~lm~~  500 (562)
                      . .+...|||++.-.
T Consensus       205 ~~~~~~~Di~slG~i  219 (360)
T 3eqc_A          205 THYSVQSDIWSMGLS  219 (360)
T ss_dssp             CCCSHHHHHHHHHHH
T ss_pred             CCCCchhhHHHHHHH
Confidence            4 5667999885433

>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7

Probab=99.94  E-value=2.6e-26  Score=241.20  Aligned_cols=191  Identities=15%  Similarity=0.203  Sum_probs=142.4

Q ss_pred             CCCCceeeeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCcccc
Q psy9184         260 SSALKNCKKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTE  333 (562)
Q Consensus       260 ~~~y~~~~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~  333 (562)
                      ..+|++.+.||+|+||.||+|      +.||||++....      ......+.+.+|+.+++.++|              
T Consensus        24 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~------~~~~~~~~~~~E~~~l~~l~h--------------   83 (367)
T 1cm8_A           24 RAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPF------QSELFAKRAYRELRLLKHMRH--------------   83 (367)
T ss_dssp             BSSEEEEEEC------CEEEEEETTTCCEEEEEECSSTT------SSHHHHHHHHHHHHHHHHCCB--------------
T ss_pred             cceEEEeEEeeecCCeEEEEEEECCCCCEEEEEEeCccc------cCHHHHHHHHHHHHHHHhCCC--------------
Confidence            367999999999999999999      789999987542      123445678999999999998              


Q ss_pred             cccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc--cCCHHHHHHHHHHHHHHHHH
Q psy9184         334 LLKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK--YRSPNQTYAMILQVVFSLAV  411 (562)
Q Consensus       334 l~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~--~l~e~~i~~I~~QIl~aL~y  411 (562)
                                  |||+++++++.....       ......+|+||||+ ++++.+.+.  .+++..+..++.||+.||.|
T Consensus        84 ------------pnIv~l~~~~~~~~~-------~~~~~~~~lv~e~~-~~~L~~~~~~~~l~~~~~~~~~~qi~~~L~~  143 (367)
T 1cm8_A           84 ------------ENVIGLLDVFTPDET-------LDDFTDFYLVMPFM-GTDLGKLMKHEKLGEDRIQFLVYQMLKGLRY  143 (367)
T ss_dssp             ------------TTBCCCSEEECSCSS-------TTTCCCCEEEEECC-SEEHHHHHHHCCCCHHHHHHHHHHHHHHHHH
T ss_pred             ------------cCCCCceeeEecCCc-------cccCceEEEEEecC-CCCHHHHHhcCCCCHHHHHHHHHHHHHHHHH
Confidence                        899999988865220       11124679999999 554444332  48999999999999999999


Q ss_pred             HHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecC--CcEEEeecCCCccccCC--C
Q psy9184         412 AEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVG--EKICYYDLSQDEELFEG--E  487 (562)
Q Consensus       412 LH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~--~g~v~~~l~~~pelF~g--~  487 (562)
                      ||+ .||+||||||+|||++.++                    .+||+|||+|+....  .+.+.+..|++||++.+  .
T Consensus       144 LH~-~~ivH~Dlkp~NIll~~~~--------------------~~kl~Dfg~a~~~~~~~~~~~~t~~y~aPE~~~~~~~  202 (367)
T 1cm8_A          144 IHA-AGIIHRDLKPGNLAVNEDC--------------------ELKILDFGLARQADSEMTGYVVTRWYRAPEVILNWMR  202 (367)
T ss_dssp             HHH-TTEECCCCCGGGEEECTTC--------------------CEEECCCTTCEECCSSCCSSCSCGGGCCTHHHHTTTC
T ss_pred             HHH-CCccccCcCHHHEEEcCCC--------------------CEEEEeeecccccccccCcCcCCCCcCCHHHHhCCCC
Confidence            999 7999999999999999886                    799999999998654  34456788999998876  3


Q ss_pred             CCcHHHHHHHhhcccCCCCCCCCCC
Q psy9184         488 GDYQFDMYRMMRKQCQNNWQNFTPK  512 (562)
Q Consensus       488 ~~~q~dIy~lm~~~~~~~W~~~~P~  512 (562)
                      .....|||++.-.. ...+.+..|+
T Consensus       203 ~~~~~DiwslG~il-~ell~g~~pf  226 (367)
T 1cm8_A          203 YTQTVDIWSVGCIM-AEMITGKTLF  226 (367)
T ss_dssp             CCTTHHHHHHHHHH-HHHHHSSCSS
T ss_pred             CChhhhHHHHHHHH-HHHHhCCCCC
Confidence            55669998864333 2333344444

>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}

Probab=99.94  E-value=3.1e-27  Score=236.08  Aligned_cols=173  Identities=17%  Similarity=0.292  Sum_probs=128.9

Q ss_pred             CCCceeeeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCccccc
Q psy9184         261 SALKNCKKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTEL  334 (562)
Q Consensus       261 ~~y~~~~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~l  334 (562)
                      ++|++.+.||+|+||.||+|      +.||+|++....     .......+.+.+|+.+++.++|               
T Consensus        11 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~-----~~~~~~~~~~~~e~~~l~~l~h---------------   70 (278)
T 3cok_A           11 EDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKA-----MYKAGMVQRVQNEVKIHCQLKH---------------   70 (278)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHH-----HHHTTCHHHHHHHHHHHTTBCC---------------
T ss_pred             ccceeeeeecCCCceEEEEEEEccCCceEEEEEeehhh-----hhhhhHHHHHHHHHHHHHhCCC---------------
Confidence            56899999999999999999      689999997542     1122334678899999999998               


Q ss_pred             ccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc----cCCHHHHHHHHHHHHHHHH
Q psy9184         335 LKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK----YRSPNQTYAMILQVVFSLA  410 (562)
Q Consensus       335 ~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~----~l~e~~i~~I~~QIl~aL~  410 (562)
                                 |||+++++++.+             .+..|+||||+++|++.+.+.    .+++.+++.++.||+.||.
T Consensus        71 -----------~~i~~~~~~~~~-------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~  126 (278)
T 3cok_A           71 -----------PSILELYNYFED-------------SNYVYLVLEMCHNGEMNRYLKNRVKPFSENEARHFMHQIITGML  126 (278)
T ss_dssp             -----------TTBCCEEEEEEC-------------SSEEEEEEECCTTEEHHHHHHTCSSCCCHHHHHHHHHHHHHHHH
T ss_pred             -----------CCeEeEEEEEcc-------------CCeEEEEEecCCCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHH
Confidence                       999999999875             558999999999887765553    3899999999999999999


Q ss_pred             HHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecC-----CcEEEeecCCCccccC
Q psy9184         411 VAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVG-----EKICYYDLSQDEELFE  485 (562)
Q Consensus       411 yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~-----~g~v~~~l~~~pelF~  485 (562)
                      |||+ .||+||||||+|||++.++                    .++|+|||+++....     ....++..|++||++.
T Consensus       127 ~lH~-~~i~H~dl~p~Nili~~~~--------------------~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~  185 (278)
T 3cok_A          127 YLHS-HGILHRDLTLSNLLLTRNM--------------------NIKIADFGLATQLKMPHEKHYTLCGTPNYISPEIAT  185 (278)
T ss_dssp             HHHH-TTEECSSCCGGGEEECTTC--------------------CEEECCCTTCEECC----------------------
T ss_pred             HHHH-CCeecCCCCHHHEEEcCCC--------------------CEEEEeecceeeccCCCCcceeccCCCCcCCcchhc
Confidence            9999 7999999999999998876                    799999999987653     2344577889999887


Q ss_pred             CC-CCcHHHHHHHh
Q psy9184         486 GE-GDYQFDMYRMM  498 (562)
Q Consensus       486 g~-~~~q~dIy~lm  498 (562)
                      +. .....|||++.
T Consensus       186 ~~~~~~~~Di~slG  199 (278)
T 3cok_A          186 RSAHGLESDVWSLG  199 (278)
T ss_dssp             ------CTHHHHHH
T ss_pred             CCCCCchhhHHHHH
Confidence            64 44458888753

>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A

Probab=99.94  E-value=8.8e-27  Score=233.42  Aligned_cols=173  Identities=24%  Similarity=0.232  Sum_probs=140.5

Q ss_pred             CCCCCceeeeeeccCceEEEEE-----eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCcccc
Q psy9184         259 PSSALKNCKKIGEGVYGEVFKL-----NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTE  333 (562)
Q Consensus       259 ~~~~y~~~~~LG~GsfG~Vyka-----~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~  333 (562)
                      ..++|++.+.||+|+||.||+|     ..||+|++.....         ..+.+.+|+.+++.++|              
T Consensus        22 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~---------~~~~~~~E~~~l~~l~h--------------   78 (283)
T 3gen_A           22 DPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSM---------SEDEFIEEAKVMMNLSH--------------   78 (283)
T ss_dssp             CGGGEEEEEECC---CEEEEEEEETTTEEEEEEEECTTSB---------CHHHHHHHHHHHHTCCC--------------
T ss_pred             CHHHHHhHhhcCCCCCceEEEEEEcCCCeEEEEEecCCCC---------CHHHHHHHHHHHhcCCC--------------
Confidence            3467999999999999999999     6899999986531         12467899999999998              


Q ss_pred             cccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc----cCCHHHHHHHHHHHHHHH
Q psy9184         334 LLKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK----YRSPNQTYAMILQVVFSL  409 (562)
Q Consensus       334 l~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~----~l~e~~i~~I~~QIl~aL  409 (562)
                                  |||+++++++.+             ++..|+||||+.+|++.+.+.    .+++.+++.++.||+.||
T Consensus        79 ------------~~i~~~~~~~~~-------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l  133 (283)
T 3gen_A           79 ------------EKLVQLYGVCTK-------------QRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAM  133 (283)
T ss_dssp             ------------TTBCCEEEEECS-------------SSSEEEEECCCTTCBHHHHHHCGGGCCCHHHHHHHHHHHHHHH
T ss_pred             ------------CCEeeEEEEEec-------------CCCeEEEEeccCCCcHHHHHHHhccCCCHHHHHHHHHHHHHHH
Confidence                        999999998875             557999999999998876653    389999999999999999


Q ss_pred             HHHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecC------CcEEEeecCCCccc
Q psy9184         410 AVAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVG------EKICYYDLSQDEEL  483 (562)
Q Consensus       410 ~yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~------~g~v~~~l~~~pel  483 (562)
                      .|||+ .||+||||||+|||++.++                    .++|+|||+++....      .+..++..|++||+
T Consensus       134 ~~lH~-~~i~H~dikp~Nili~~~~--------------------~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~  192 (283)
T 3gen_A          134 EYLES-KQFLHRDLAARNCLVNDQG--------------------VVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEV  192 (283)
T ss_dssp             HHHHH-TTCCCSSCSGGGEEECTTS--------------------CEEECSTTGGGGBCCHHHHSTTSTTSCGGGCCHHH
T ss_pred             HHHHH-CCccCCCCccceEEEcCCC--------------------CEEEccccccccccccccccccCCccCcccCCHHH
Confidence            99999 7999999999999999876                    799999999986543      22333556889998


Q ss_pred             cCC-CCCcHHHHHHHhhc
Q psy9184         484 FEG-EGDYQFDMYRMMRK  500 (562)
Q Consensus       484 F~g-~~~~q~dIy~lm~~  500 (562)
                      +.+ ......|||++.-.
T Consensus       193 ~~~~~~~~~~Dv~slG~~  210 (283)
T 3gen_A          193 LMYSKFSSKSDIWAFGVL  210 (283)
T ss_dssp             HHHCCCSHHHHHHHHHHH
T ss_pred             hccCCCCchhhHHHHHHH
Confidence            875 45666899885433

>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...

Probab=99.94  E-value=2e-26  Score=229.38  Aligned_cols=229  Identities=18%  Similarity=0.171  Sum_probs=165.2

Q ss_pred             CCCceeeeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCccccc
Q psy9184         261 SALKNCKKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTEL  334 (562)
Q Consensus       261 ~~y~~~~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~l  334 (562)
                      ++|++.+.||+|+||.||+|      +.||+|++....       .....+.+.+|+.+++.++|               
T Consensus         7 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-------~~~~~~~~~~e~~~l~~l~h---------------   64 (276)
T 2yex_A            7 EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKR-------AVDCPENIKKEICINKMLNH---------------   64 (276)
T ss_dssp             HHEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGG-------CTTHHHHHHHHHHHHHTCCC---------------
T ss_pred             cceEEEEEeecCCCcEEEEEEECCCCcEEEEEEeeecc-------chhhhHHHHHHHHHHHhcCC---------------
Confidence            45899999999999999999      789999998643       12234678899999999998               


Q ss_pred             ccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc---cCCHHHHHHHHHHHHHHHHH
Q psy9184         335 LKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK---YRSPNQTYAMILQVVFSLAV  411 (562)
Q Consensus       335 ~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~---~l~e~~i~~I~~QIl~aL~y  411 (562)
                                 |||+++++++.+             ++..|+||||+.+|++.+.+.   .+++.+++.++.||+.||.|
T Consensus        65 -----------~~i~~~~~~~~~-------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~  120 (276)
T 2yex_A           65 -----------ENVVKFYGHRRE-------------GNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVY  120 (276)
T ss_dssp             -----------TTBCCEEEEEEE-------------TTEEEEEEECCTTEEGGGGSBTTTBCCHHHHHHHHHHHHHHHHH
T ss_pred             -----------CCceeeeeEEEc-------------CCEEEEEEEecCCCcHHHHHhhccCCCHHHHHHHHHHHHHHHHH
Confidence                       999999998875             558999999999988877765   38999999999999999999


Q ss_pred             HHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecC-------CcEEEeecCCCcccc
Q psy9184         412 AEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVG-------EKICYYDLSQDEELF  484 (562)
Q Consensus       412 LH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~-------~g~v~~~l~~~pelF  484 (562)
                      ||+ .||+||||||+|||++.++                    .++|+|||+++....       ....++..|++||++
T Consensus       121 lH~-~~i~H~dl~p~Nil~~~~~--------------------~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~  179 (276)
T 2yex_A          121 LHG-IGITHRDIKPENLLLDERD--------------------NLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELL  179 (276)
T ss_dssp             HHH-TTEECSCCSGGGEEECTTC--------------------CEEECCCTTCEECEETTEECCBCCCCSCGGGCCGGGG
T ss_pred             HHh-CCeeccCCChHHEEEccCC--------------------CEEEeeCCCccccCCCcchhcccCCccccCccChHHH
Confidence            999 7999999999999999876                    799999999986542       223456778999998


Q ss_pred             CCCC--CcHHHHHHHhhcccCCCCCCCCCCChhhhHHHHHHHHhhcccCCCCCCCchhHHHHHHHHHHHhcCCCcCcCC
Q psy9184         485 EGEG--DYQFDMYRMMRKQCQNNWQNFTPKNNVFWIHYLVDKATCLKKGYQYLRAPRHQAFELLEELGQNALHFDSCYE  561 (562)
Q Consensus       485 ~g~~--~~q~dIy~lm~~~~~~~W~~~~P~tn~~wl~yl~~~Ll~~~~~~~~~~~~~~~~~~~l~~l~~~~l~~~s~~~  561 (562)
                      .+..  ..+.|||++.-... ..+.+..|+....-.......+.. ...+...   ....-..+.+|...+|..+...|
T Consensus       180 ~~~~~~~~~~Di~slG~il~-~l~~g~~p~~~~~~~~~~~~~~~~-~~~~~~~---~~~~~~~~~~li~~~l~~~p~~R  253 (276)
T 2yex_A          180 KRREFHAEPVDVWSCGIVLT-AMLAGELPWDQPSDSCQEYSDWKE-KKTYLNP---WKKIDSAPLALLHKILVENPSAR  253 (276)
T ss_dssp             TCSSBCHHHHHHHHHHHHHH-HHHHSSCCCSCSCTTSHHHHHHHT-TCTTSTT---GGGSCHHHHHHHHHHSCSSTTTS
T ss_pred             hcCCCCCCcchHHHHHHHHH-HHHhCCCCCCCCchHHHHHHHhhh-cccccCc---hhhcCHHHHHHHHHHCCCCchhC
Confidence            8754  34589988643332 222233333111000000111122 1111111   11123466778888888877665

>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*

Probab=99.94  E-value=2.4e-26  Score=231.28  Aligned_cols=226  Identities=13%  Similarity=0.099  Sum_probs=167.7

Q ss_pred             CCCCceeeeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCcccc
Q psy9184         260 SSALKNCKKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTE  333 (562)
Q Consensus       260 ~~~y~~~~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~  333 (562)
                      .++|++.+.||+|+||.||+|      +.||||++.....          ...+.+|+.+++.+.+              
T Consensus         9 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~----------~~~~~~e~~~~~~l~~--------------   64 (298)
T 1csn_A            9 GVHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRSD----------APQLRDEYRTYKLLAG--------------   64 (298)
T ss_dssp             TTTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCTT----------SCCHHHHHHHHHHTTT--------------
T ss_pred             ccceEEEEEEeecCCEEEEEEEECCCCcEEEEEEeccCCc----------cHHHHHHHHHHHHHhc--------------
Confidence            367999999999999999999      8999999875431          1246789999999965              


Q ss_pred             cccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc----cCCHHHHHHHHHHHHHHH
Q psy9184         334 LLKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK----YRSPNQTYAMILQVVFSL  409 (562)
Q Consensus       334 l~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~----~l~e~~i~~I~~QIl~aL  409 (562)
                                 |++++++++++..             +...|+||||+ +|++.+.+.    .+++.+++.++.||+.||
T Consensus        65 -----------~~~i~~~~~~~~~-------------~~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l  119 (298)
T 1csn_A           65 -----------CTGIPNVYYFGQE-------------GLHNVLVIDLL-GPSLEDLLDLCGRKFSVKTVAMAAKQMLARV  119 (298)
T ss_dssp             -----------CTTCCCEEEEEEE-------------TTEEEEEEECC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHH
T ss_pred             -----------CCCCCeEEeecCC-------------CceeEEEEEec-CCCHHHHHHHhccCCCHHHHHHHHHHHHHHH
Confidence                       4888888888765             55899999999 787766654    389999999999999999


Q ss_pred             HHHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecCC------------cEEEeec
Q psy9184         410 AVAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVGE------------KICYYDL  477 (562)
Q Consensus       410 ~yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~~------------g~v~~~l  477 (562)
                      .|||+ .||+||||||+|||++.++..               .+..+||+|||+|+.....            ...++..
T Consensus       120 ~~lH~-~~ivH~Dlkp~NIl~~~~~~~---------------~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~gt~~  183 (298)
T 1csn_A          120 QSIHE-KSLVYRDIKPDNFLIGRPNSK---------------NANMIYVVDFGMVKFYRDPVTKQHIPYREKKNLSGTAR  183 (298)
T ss_dssp             HHHHT-TTEECCCCCGGGEEECCSSST---------------TTTCEEECCCTTCEESBCTTTCCBCCCCCCCCCCSCTT
T ss_pred             HHHHh-CCEecCCCCHHHEEeccCCCC---------------CCCeEEEEECccccccccccccccccccCccCCCCCcc
Confidence            99999 799999999999999877521               1125999999999876542            2345778


Q ss_pred             CCCccccCCC-CCcHHHHHHHhhccc-----CCCCCCCCCCCh-----------------------hhhHHHHHHHHhhc
Q psy9184         478 SQDEELFEGE-GDYQFDMYRMMRKQC-----QNNWQNFTPKNN-----------------------VFWIHYLVDKATCL  528 (562)
Q Consensus       478 ~~~pelF~g~-~~~q~dIy~lm~~~~-----~~~W~~~~P~tn-----------------------~~wl~yl~~~Ll~~  528 (562)
                      |++||++.+. .+...|||++.-...     ...|....+...                       ...+..++.+|+. 
T Consensus       184 y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~-  262 (298)
T 1csn_A          184 YMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKYERIGEKKQSTPLRELCAGFPEEFYKYMHYARN-  262 (298)
T ss_dssp             TCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCCHHHHHHHHHHHHHHSCHHHHTTTSCHHHHHHHHHHHH-
T ss_pred             cCCchhhcCCCCChHHHHHHHHHHHHHHHcCCCCcchhhccccHHHHHHHHhhccCccHHHHHhhCcHHHHHHHHHHhc-
Confidence            9999998774 466799988643332     223333221110                       1135566666776 


Q ss_pred             ccCCCCCCCchhHHHHHHHHHHHhc
Q psy9184         529 KKGYQYLRAPRHQAFELLEELGQNA  553 (562)
Q Consensus       529 ~~~~~~~~~~~~~~~~~l~~l~~~~  553 (562)
                        .-+..|+...+..+.|+++.+.+
T Consensus       263 --~dp~~RP~~~~l~~~l~~~~~~~  285 (298)
T 1csn_A          263 --LAFDATPDYDYLQGLFSKVLERL  285 (298)
T ss_dssp             --CCTTCCCCHHHHHHHHHHHHHHT
T ss_pred             --CCcccCCCHHHHHHHHHHHHHhc
Confidence              34555656666677777776654

>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*

Probab=99.94  E-value=3.4e-26  Score=230.58  Aligned_cols=238  Identities=16%  Similarity=0.175  Sum_probs=171.4

Q ss_pred             CCCceeeeeeccCceEEEEE------eeEEEEEeecCCCCCCc-chhHHHHHHHHHHHHHHHhcCCccccCCCCCCcccc
Q psy9184         261 SALKNCKKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVN-GEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTE  333 (562)
Q Consensus       261 ~~y~~~~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~-~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~  333 (562)
                      ++|++.+.||+|+||.||+|      +.||||++......... .......+.+.+|+.+++++.+              
T Consensus        17 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~--------------   82 (298)
T 1phk_A           17 ENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSG--------------   82 (298)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTT--------------
T ss_pred             hccceeeeecCCCceEEEEEEEcCcCceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhcC--------------
Confidence            67999999999999999999      78999999875422111 1223445778899999999973              


Q ss_pred             cccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc---cCCHHHHHHHHHHHHHHHH
Q psy9184         334 LLKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK---YRSPNQTYAMILQVVFSLA  410 (562)
Q Consensus       334 l~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~---~l~e~~i~~I~~QIl~aL~  410 (562)
                                 ||||+++++++..             ++..|+||||+.+|++.+.+.   .+++.+++.++.||+.||.
T Consensus        83 -----------h~~i~~~~~~~~~-------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~  138 (298)
T 1phk_A           83 -----------HPNIIQLKDTYET-------------NTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVIC  138 (298)
T ss_dssp             -----------CTTBCCEEEEEEC-------------SSEEEEEEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHH
T ss_pred             -----------CCCEeeeeeeecc-------------CCeEEEEEeccCCCcHHHHHhccCCCCHHHHHHHHHHHHHHHH
Confidence                       3999999998875             568999999999998876664   4899999999999999999


Q ss_pred             HHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecCC----cEEEeecCCCccccCC
Q psy9184         411 VAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVGE----KICYYDLSQDEELFEG  486 (562)
Q Consensus       411 yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~~----g~v~~~l~~~pelF~g  486 (562)
                      |||+ .||+||||||+|||++.++                    .++|+|||+++.....    ...++..|++||++.+
T Consensus       139 ~lH~-~~i~H~dl~p~Nil~~~~~--------------------~~kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~  197 (298)
T 1phk_A          139 ALHK-LNIVHRDLKPENILLDDDM--------------------NIKLTDFGFSCQLDPGEKLREVCGTPSYLAPEIIEC  197 (298)
T ss_dssp             HHHH-TTEECSCCSGGGEEECTTC--------------------CEEECCCTTCEECCTTCCBCCCCSCGGGCCHHHHHH
T ss_pred             HHHH-CCcccCCCCcceEEEcCCC--------------------cEEEecccchhhcCCCcccccccCCccccCHHHhcc
Confidence            9999 7999999999999998886                    7999999999876542    2345677899998752


Q ss_pred             -------CCCcHHHHHHHhhcccCCCCCCCCCCChhhhHHHHHHHHhhcccCCCCCCCchhHHHHHHHHHHHhcCCCcCc
Q psy9184         487 -------EGDYQFDMYRMMRKQCQNNWQNFTPKNNVFWIHYLVDKATCLKKGYQYLRAPRHQAFELLEELGQNALHFDSC  559 (562)
Q Consensus       487 -------~~~~q~dIy~lm~~~~~~~W~~~~P~tn~~wl~yl~~~Ll~~~~~~~~~~~~~~~~~~~l~~l~~~~l~~~s~  559 (562)
                             ......|||++.-... ..+.+..|+....... +...+......+..  ......-..+.+|...+|..+..
T Consensus       198 ~~~~~~~~~~~~~Di~slG~~l~-~l~~g~~p~~~~~~~~-~~~~~~~~~~~~~~--~~~~~~~~~l~~li~~~l~~dp~  273 (298)
T 1phk_A          198 SMNDNHPGYGKEVDMWSTGVIMY-TLLAGSPPFWHRKQML-MLRMIMSGNYQFGS--PEWDDYSDTVKDLVSRFLVVQPQ  273 (298)
T ss_dssp             HHCTTSCCBCTHHHHHHHHHHHH-HHHHSSCSSCCSSHHH-HHHHHHHTCCCCCT--TTGGGSCHHHHHHHHHHCCSSGG
T ss_pred             ccccccccCCcccccHhHHHHHH-HHHHCCCCCcCccHHH-HHHHHhcCCcccCc--ccccccCHHHHHHHHHHccCCcc
Confidence                   3455689988643332 2333444443222111 22223331222222  11112245678888999988876


Q ss_pred             CC
Q psy9184         560 YE  561 (562)
Q Consensus       560 ~~  561 (562)
                      .|
T Consensus       274 ~R  275 (298)
T 1phk_A          274 KR  275 (298)
T ss_dssp             GS
T ss_pred             cC
Confidence            55

>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A

Probab=99.94  E-value=1.3e-26  Score=235.93  Aligned_cols=235  Identities=18%  Similarity=0.193  Sum_probs=162.9

Q ss_pred             CCCcee-eeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCcccc
Q psy9184         261 SALKNC-KKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTE  333 (562)
Q Consensus       261 ~~y~~~-~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~  333 (562)
                      +.|++. +.||+|+||.||+|      +.||||++....        ......+.+|+.+++++..              
T Consensus        12 ~~y~i~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--------~~~~~~~~~E~~~l~~~~~--------------   69 (316)
T 2ac3_A           12 DVYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQP--------GHIRSRVFREVEMLYQCQG--------------   69 (316)
T ss_dssp             TSCEECCCCCCCCSSEEEEEEECSSSCCEEEEEEEECCS--------SCCHHHHHHHHHHHHHTCC--------------
T ss_pred             eeEEecCceecCCceEEEEEEEEcCCCcEEEEEEEeeCc--------chhHHHHHHHHHHHHHhcC--------------
Confidence            568875 78999999999999      799999998653        1223578899999998643              


Q ss_pred             cccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc---cCCHHHHHHHHHHHHHHHH
Q psy9184         334 LLKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK---YRSPNQTYAMILQVVFSLA  410 (562)
Q Consensus       334 l~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~---~l~e~~i~~I~~QIl~aL~  410 (562)
                                 ||||+++++++.+             ++.+|+||||+.||++.+.+.   .+++.+++.++.||+.||.
T Consensus        70 -----------h~~i~~~~~~~~~-------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~  125 (316)
T 2ac3_A           70 -----------HRNVLELIEFFEE-------------EDRFYLVFEKMRGGSILSHIHKRRHFNELEASVVVQDVASALD  125 (316)
T ss_dssp             -----------CTTBCCEEEEEEE-------------TTEEEEEEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHH
T ss_pred             -----------CCCeeeEEEEEee-------------CCEEEEEEEcCCCCcHHHHHhccCCCCHHHHHHHHHHHHHHHH
Confidence                       3999999999876             558999999999998877664   4899999999999999999


Q ss_pred             HHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecCC------------cEEEeecC
Q psy9184         411 VAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVGE------------KICYYDLS  478 (562)
Q Consensus       411 yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~~------------g~v~~~l~  478 (562)
                      |||+ .||+||||||+|||++.++..                 ..+||+|||+++.....            ...++..|
T Consensus       126 ~lH~-~~ivH~dlkp~Nil~~~~~~~-----------------~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~gt~~y  187 (316)
T 2ac3_A          126 FLHN-KGIAHRDLKPENILCEHPNQV-----------------SPVKICDFDLGSGIKLNGDCSPISTPELLTPCGSAEY  187 (316)
T ss_dssp             HHHH-TTCCCCCCCGGGEEESCSSSS-----------------CSEEECCTTCCC-------------------CCSGGG
T ss_pred             HHHh-CCceeCCCCHHHEEEccCCCc-----------------CceEEEEccCccccccCCccccccccccccccCCcCc
Confidence            9999 799999999999999887521                 14999999999865421            22356789


Q ss_pred             CCccccCC------CCCcHHHHHHHhhcccCCCCCCCCCCChh-----hh---------HHHHHHHHhhcccCCCCCCCc
Q psy9184         479 QDEELFEG------EGDYQFDMYRMMRKQCQNNWQNFTPKNNV-----FW---------IHYLVDKATCLKKGYQYLRAP  538 (562)
Q Consensus       479 ~~pelF~g------~~~~q~dIy~lm~~~~~~~W~~~~P~tn~-----~w---------l~yl~~~Ll~~~~~~~~~~~~  538 (562)
                      ++||++.+      ..+...|||++.-... ..+.+..|+...     .|         ...+..........++.  ..
T Consensus       188 ~aPE~~~~~~~~~~~~~~~~DiwslG~il~-~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~--~~  264 (316)
T 2ac3_A          188 MAPEVVEAFSEEASIYDKRCDLWSLGVILY-ILLSGYPPFVGRCGSDCGWDRGEACPACQNMLFESIQEGKYEFPD--KD  264 (316)
T ss_dssp             CCHHHHHHTSHHHHHHTTTHHHHHHHHHHH-HHHHSSCSCCCCCCSCSCC----CCHHHHHHHHHHHHHCCCCCCH--HH
T ss_pred             cChHHhhcccccccCCCcccccHhHHHHHH-HHHHCCCCCcccccccccccccccchhHHHHHHHHHhccCcccCc--hh
Confidence            99998864      2345589988643332 222223333110     01         12223333331111111  00


Q ss_pred             hhHHHHHHHHHHHhcCCCcCcCCC
Q psy9184         539 RHQAFELLEELGQNALHFDSCYEM  562 (562)
Q Consensus       539 ~~~~~~~l~~l~~~~l~~~s~~~~  562 (562)
                      ....-..+.+|.+.||.++...|.
T Consensus       265 ~~~~~~~~~~li~~~L~~dP~~Rp  288 (316)
T 2ac3_A          265 WAHISCAAKDLISKLLVRDAKQRL  288 (316)
T ss_dssp             HTTSCHHHHHHHHHHSCSSTTTSC
T ss_pred             cccCCHHHHHHHHHHhhCChhhCC
Confidence            001134678899999999887763

>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*

Probab=99.94  E-value=2.9e-27  Score=234.16  Aligned_cols=177  Identities=16%  Similarity=0.152  Sum_probs=147.7

Q ss_pred             CCCCceeeeeeccCceEEEEE----eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCcccccc
Q psy9184         260 SSALKNCKKIGEGVYGEVFKL----NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTELL  335 (562)
Q Consensus       260 ~~~y~~~~~LG~GsfG~Vyka----~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~l~  335 (562)
                      .++|++.+.||+|+||.||+|    ..||+|++....      ......+.+.+|+.+++.++|                
T Consensus         9 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~avK~~~~~~------~~~~~~~~~~~E~~~l~~l~h----------------   66 (271)
T 3kmu_A            9 FKQLNFLTKLNENHSGELWKGRWQGNDIVVKVLKVRD------WSTRKSRDFNEECPRLRIFSH----------------   66 (271)
T ss_dssp             GGGCEEEEEEEEETTEEEEEEEETTEEEEEEEECCTT------CCHHHHHHHHHHGGGGCCCSC----------------
T ss_pred             HHHhHHHHHhcCCCcceEEEEEECCeeEEEEEecccc------cCHHHHHHHHHHHHHHHhcCC----------------
Confidence            367999999999999999999    899999998753      123445678999999999988                


Q ss_pred             cccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc-----cCCHHHHHHHHHHHHHHHH
Q psy9184         336 KCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK-----YRSPNQTYAMILQVVFSLA  410 (562)
Q Consensus       336 ~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~-----~l~e~~i~~I~~QIl~aL~  410 (562)
                                |||+++++++.+..           .+..|+||||++||++.+.+.     .+++.+++.++.||+.||.
T Consensus        67 ----------~~iv~~~~~~~~~~-----------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~  125 (271)
T 3kmu_A           67 ----------PNVLPVLGACQSPP-----------APHPTLITHWMPYGSLYNVLHEGTNFVVDQSQAVKFALDMARGMA  125 (271)
T ss_dssp             ----------TTEECEEEEECTTT-----------SSSCEEEEECCTTCBHHHHHHSCSSCCCCHHHHHHHHHHHHHHHH
T ss_pred             ----------CchhheEEEEccCC-----------CCCeEeeecccCCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHH
Confidence                      99999999887521           357899999999998877664     2799999999999999999


Q ss_pred             HHHhhCC--eEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecCCcEEEeecCCCccccCCCC
Q psy9184         411 VAEVELE--FEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVGEKICYYDLSQDEELFEGEG  488 (562)
Q Consensus       411 yLH~~~~--IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~~g~v~~~l~~~pelF~g~~  488 (562)
                      |||+ .+  |+||||||+|||++.++                    .++|+|||++......+..++..|++||++.+..
T Consensus       126 ~lH~-~~~~i~H~dikp~Nil~~~~~--------------------~~~l~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~  184 (271)
T 3kmu_A          126 FLHT-LEPLIPRHALNSRSVMIDEDM--------------------TARISMADVKFSFQSPGRMYAPAWVAPEALQKKP  184 (271)
T ss_dssp             HHTT-SSSCCTTCCCSGGGEEECTTS--------------------CEEEEGGGSCCTTSCTTCBSCGGGSCHHHHHSCG
T ss_pred             HHhc-CCCceecCCCccceEEEcCCc--------------------ceeEEeccceeeecccCccCCccccChhhhccCC
Confidence            9999 79  99999999999999876                    6899998888776666677788999999988742


Q ss_pred             -C-c--HHHHHHHhhc
Q psy9184         489 -D-Y--QFDMYRMMRK  500 (562)
Q Consensus       489 -~-~--q~dIy~lm~~  500 (562)
                       . +  +.|||++.-.
T Consensus       185 ~~~~~~~~Di~slG~i  200 (271)
T 3kmu_A          185 EDTNRRSADMWSFAVL  200 (271)
T ss_dssp             GGSCHHHHHHHHHHHH
T ss_pred             CCCCCchhhHHHHHHH
Confidence             2 2  5899886433

>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*

Probab=99.94  E-value=2.1e-26  Score=236.00  Aligned_cols=172  Identities=16%  Similarity=0.163  Sum_probs=142.1

Q ss_pred             CceeeeeeccCceEEEEE----------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCccc
Q psy9184         263 LKNCKKIGEGVYGEVFKL----------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFT  332 (562)
Q Consensus       263 y~~~~~LG~GsfG~Vyka----------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv  332 (562)
                      |+++++||+|+||.||+|          +.||||++....       .......+.+|+.+++.++|             
T Consensus        33 ~~~~~~lG~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~-------~~~~~~~~~~E~~~l~~l~h-------------   92 (318)
T 3lxp_A           33 LKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADA-------GPQHRSGWKQEIDILRTLYH-------------   92 (318)
T ss_dssp             EEEEEEEEECSSEEEEEEEECSCC--CCEEEEEEEECTTC-------CHHHHHHHHHHHHHHHHCCC-------------
T ss_pred             HhhhheecCCCCeEEEEEEEccCCCCCCcEEEEEEecccc-------ChHHHHHHHHHHHHHHhCCC-------------
Confidence            599999999999999776          679999998653       23445678999999999998             


Q ss_pred             ccccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCcccccc--CCHHHHHHHHHHHHHHHH
Q psy9184         333 ELLKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIKY--RSPNQTYAMILQVVFSLA  410 (562)
Q Consensus       333 ~l~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~~--l~e~~i~~I~~QIl~aL~  410 (562)
                                   |||+++++++.+..           ...+|+||||+++|++.+.+..  +++.+++.++.||+.||.
T Consensus        93 -------------~~iv~~~~~~~~~~-----------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~i~~~l~~~l~  148 (318)
T 3lxp_A           93 -------------EHIIKYKGCCEDAG-----------AASLQLVMEYVPLGSLRDYLPRHSIGLAQLLLFAQQICEGMA  148 (318)
T ss_dssp             -------------TTBCCEEEEEEETT-----------TTEEEEEECCCTTCBHHHHGGGSCCCHHHHHHHHHHHHHHHH
T ss_pred             -------------cchhhEEEEEecCC-----------CceEEEEEecccCCcHHHHHhhCCCCHHHHHHHHHHHHHHHH
Confidence                         99999999887522           4579999999999988776653  899999999999999999


Q ss_pred             HHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecCCc--------EEEeecCCCcc
Q psy9184         411 VAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVGEK--------ICYYDLSQDEE  482 (562)
Q Consensus       411 yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~~g--------~v~~~l~~~pe  482 (562)
                      |||+ .||+||||||+|||++.++                    .+||+|||+++......        ...+..|++||
T Consensus       149 ~LH~-~~ivH~Dikp~Nil~~~~~--------------------~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~y~aPE  207 (318)
T 3lxp_A          149 YLHA-QHYIHRDLAARNVLLDNDR--------------------LVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPE  207 (318)
T ss_dssp             HHHH-TTEECSCCSGGGEEECTTC--------------------CEEECCGGGCEECCTTCSEEEC---CCCCGGGCCHH
T ss_pred             HHHh-CCccCCCCchheEEEcCCC--------------------CEEECCccccccccccccccccccCCCCCceeeChH
Confidence            9999 7999999999999998886                    79999999999875422        12244588999


Q ss_pred             ccCCC-CCcHHHHHHHhh
Q psy9184         483 LFEGE-GDYQFDMYRMMR  499 (562)
Q Consensus       483 lF~g~-~~~q~dIy~lm~  499 (562)
                      ++.+. .....|||++.-
T Consensus       208 ~~~~~~~~~~~Di~slG~  225 (318)
T 3lxp_A          208 CLKEYKFYYASDVWSFGV  225 (318)
T ss_dssp             HHHHCEEEHHHHHHHHHH
T ss_pred             HhcCCCCCcHHHHHHHHH
Confidence            88763 455689988543

>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=99.94  E-value=1.9e-26  Score=238.24  Aligned_cols=179  Identities=21%  Similarity=0.206  Sum_probs=140.5

Q ss_pred             cccccCCCCCCceeeeeeccCceEEEEE----------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccc
Q psy9184         253 SFEDRYPSSALKNCKKIGEGVYGEVFKL----------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQY  322 (562)
Q Consensus       253 ~f~~~~~~~~y~~~~~LG~GsfG~Vyka----------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~  322 (562)
                      .|...+...+|.+.+.||+|+||.||+|          ..||+|++....       .......+.+|+.+++.++|   
T Consensus        36 ~~~~~i~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~~-------~~~~~~~~~~E~~~l~~l~h---  105 (333)
T 1mqb_A           36 KFTTEIHPSCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGY-------TEKQRVDFLGEAGIMGQFSH---  105 (333)
T ss_dssp             --CCBCCTTTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTC-------CHHHHHHHHHHHHHHHTCCC---
T ss_pred             hccccCChHHhhcccEEecCCCeEEEEEEEecCCCCccccEEEEEcCCCC-------CHHHHHHHHHHHHHHHhCCC---
Confidence            4444556688999999999999999999          249999998543       23445678999999999998   


Q ss_pred             cCCCCCCcccccccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc----cCCHHHH
Q psy9184         323 RTENSTPCFTELLKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK----YRSPNQT  398 (562)
Q Consensus       323 ~~~n~~p~fv~l~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~----~l~e~~i  398 (562)
                                             |||+++++++..             .+..|+||||+.+|++.+.+.    .+++.++
T Consensus       106 -----------------------~~iv~~~~~~~~-------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~  149 (333)
T 1mqb_A          106 -----------------------HNIIRLEGVISK-------------YKPMMIITEYMENGALDKFLREKDGEFSVLQL  149 (333)
T ss_dssp             -----------------------TTBCCEEEEECS-------------SSSEEEEEECCTTEEHHHHHHHTTTCSCHHHH
T ss_pred             -----------------------CCCCcEEEEEec-------------CCCcEEEEeCCCCCcHHHHHHhCCCCCCHHHH
Confidence                                   999999998865             458999999999987766653    3899999


Q ss_pred             HHHHHHHHHHHHHHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecCCc-------
Q psy9184         399 YAMILQVVFSLAVAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVGEK-------  471 (562)
Q Consensus       399 ~~I~~QIl~aL~yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~~g-------  471 (562)
                      +.++.||+.||.|||+ .||+||||||+|||++.++                    .+||+|||+++......       
T Consensus       150 ~~i~~qi~~aL~~LH~-~~ivH~Dikp~NIl~~~~~--------------------~~kl~Dfg~~~~~~~~~~~~~~~~  208 (333)
T 1mqb_A          150 VGMLRGIAAGMKYLAN-MNYVHRDLAARNILVNSNL--------------------VCKVSDFGLSRVLEDDPEATYTTS  208 (333)
T ss_dssp             HHHHHHHHHHHHHHHH-TTCCCSCCCGGGEEECTTC--------------------CEEECCCCC---------------
T ss_pred             HHHHHHHHHHHHHHHh-CCeeCCCCChheEEECCCC--------------------cEEECCCCcchhhccccccccccC
Confidence            9999999999999999 7999999999999998876                    79999999998765421       


Q ss_pred             -EEEeecCCCccccCC-CCCcHHHHHHHh
Q psy9184         472 -ICYYDLSQDEELFEG-EGDYQFDMYRMM  498 (562)
Q Consensus       472 -~v~~~l~~~pelF~g-~~~~q~dIy~lm  498 (562)
                       ...+..|++||++.+ ..+...|||++.
T Consensus       209 ~~~~~~~y~aPE~~~~~~~~~~~Di~slG  237 (333)
T 1mqb_A          209 GGKIPIRWTAPEAISYRKFTSASDVWSFG  237 (333)
T ss_dssp             --CCCGGGSCHHHHHSCCCCHHHHHHHHH
T ss_pred             CCCccccccCchhcccCCCCchhhhHHHH
Confidence             112346899998876 456668998853

>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7

Probab=99.94  E-value=1.6e-27  Score=248.87  Aligned_cols=231  Identities=20%  Similarity=0.227  Sum_probs=166.1

Q ss_pred             CCCceeeeeeccCceEEEEE---------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCcc
Q psy9184         261 SALKNCKKIGEGVYGEVFKL---------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCF  331 (562)
Q Consensus       261 ~~y~~~~~LG~GsfG~Vyka---------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~f  331 (562)
                      ++|++.+.||+|+||.||+|         +.||||+++....    .......+.+.+|+.+++.+.+            
T Consensus        54 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~----~~~~~~~~~~~~E~~~l~~l~~------------  117 (355)
T 1vzo_A           54 ENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATI----VQKAKTTEHTRTERQVLEHIRQ------------  117 (355)
T ss_dssp             GGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEE----EEEESSGGGCCCHHHHHHHHHT------------
T ss_pred             cceEEEEEeccCCCEEEEEEEEcccCCCCeEEEEEEEeHHHh----hhhhhHHHHHHHHHHHHHHccC------------
Confidence            67999999999999999998         5799999875321    0011122456689999999964            


Q ss_pred             cccccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc---cCCHHHHHHHHHHHHHH
Q psy9184         332 TELLKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK---YRSPNQTYAMILQVVFS  408 (562)
Q Consensus       332 v~l~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~---~l~e~~i~~I~~QIl~a  408 (562)
                                   ||||+++++++..             ++.+|+||||+.+|++.+.+.   .+++.+++.++.||+.|
T Consensus       118 -------------h~~iv~~~~~~~~-------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~a  171 (355)
T 1vzo_A          118 -------------SPFLVTLHYAFQT-------------ETKLHLILDYINGGELFTHLSQRERFTEHEVQIYVGEIVLA  171 (355)
T ss_dssp             -------------CTTBCCEEEEEEE-------------TTEEEEEECCCCSCBHHHHHHHHSCCCHHHHHHHHHHHHHH
T ss_pred             -------------CCceeEEEEEEee-------------CceEEEEeecCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHH
Confidence                         4999999998875             558999999999998877664   48999999999999999


Q ss_pred             HHHHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecC------CcEEEeecCCCcc
Q psy9184         409 LAVAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVG------EKICYYDLSQDEE  482 (562)
Q Consensus       409 L~yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~------~g~v~~~l~~~pe  482 (562)
                      |.|||+ .+|+||||||+|||++.++                    .+||+|||+|+....      ...+++..|++||
T Consensus       172 L~~LH~-~~ivH~Dlkp~NIll~~~~--------------------~~kl~DfG~a~~~~~~~~~~~~~~~gt~~y~aPE  230 (355)
T 1vzo_A          172 LEHLHK-LGIIYRDIKLENILLDSNG--------------------HVVLTDFGLSKEFVADETERAYDFCGTIEYMAPD  230 (355)
T ss_dssp             HHHHHH-TTCCCCCCCGGGEEECTTS--------------------CEEESCSSEEEECCGGGGGGGCGGGSCCTTCCHH
T ss_pred             HHHHHH-CCcccCCCCHHHEEECCCC--------------------cEEEeeCCCCeecccCCCCcccCcccCcCccChh
Confidence            999999 7999999999999998876                    799999999987542      2234678899999


Q ss_pred             ccCCC---CCcHHHHHHHhhcccCCCCCCCCCCC---hhhhHHHHHHHHhhcccCCCCCCCchhHHHHHHHHHHHhcCCC
Q psy9184         483 LFEGE---GDYQFDMYRMMRKQCQNNWQNFTPKN---NVFWIHYLVDKATCLKKGYQYLRAPRHQAFELLEELGQNALHF  556 (562)
Q Consensus       483 lF~g~---~~~q~dIy~lm~~~~~~~W~~~~P~t---n~~wl~yl~~~Ll~~~~~~~~~~~~~~~~~~~l~~l~~~~l~~  556 (562)
                      ++.+.   .+...|||++.-... ....+..|+.   .......+....+.....++..      .-..+.+|...+|..
T Consensus       231 ~~~~~~~~~~~~~DvwslG~il~-ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~li~~~L~~  303 (355)
T 1vzo_A          231 IVRGGDSGHDKAVDWWSLGVLMY-ELLTGASPFTVDGEKNSQAEISRRILKSEPPYPQE------MSALAKDLIQRLLMK  303 (355)
T ss_dssp             HHTTCC---CTHHHHHHHHHHHH-HHHHSSCTTSCTTSCCCHHHHHHHHHHCCCCCCTT------SCHHHHHHHHHHTCS
T ss_pred             hhcCCCCCCCchhhHHHHHHHHH-HHHHCCCCCccCCccchHHHHHHHHhccCCCCCcc------cCHHHHHHHHHHhhh
Confidence            98863   355689988643332 2222333332   1111233334444412222221      123567778888888


Q ss_pred             cCcCC
Q psy9184         557 DSCYE  561 (562)
Q Consensus       557 ~s~~~  561 (562)
                      +...|
T Consensus       304 dP~~R  308 (355)
T 1vzo_A          304 DPKKR  308 (355)
T ss_dssp             SGGGS
T ss_pred             CHHHh
Confidence            77665

>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*

Probab=99.94  E-value=1.1e-26  Score=238.47  Aligned_cols=181  Identities=18%  Similarity=0.157  Sum_probs=146.8

Q ss_pred             ccccCCCCCCceeeeeeccCceEEEEE----------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCcccc
Q psy9184         254 FEDRYPSSALKNCKKIGEGVYGEVFKL----------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYR  323 (562)
Q Consensus       254 f~~~~~~~~y~~~~~LG~GsfG~Vyka----------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~  323 (562)
                      ....+...+|++.+.||+|+||.||+|          +.||||++....        ....+.+.+|+.+++.++|    
T Consensus        16 ~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~--------~~~~~~~~~E~~~l~~l~h----   83 (327)
T 3lxl_A           16 DPTIFEERHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSG--------PDQQRDFQREIQILKALHS----   83 (327)
T ss_dssp             -CCBCCGGGEEEEEEEEEETTEEEEEEEECTTSSSCSEEEEEEEESSCC--------HHHHHHHHHHHHHHHTCCC----
T ss_pred             hhhhhchhhhhhhhhccCCCCeEEEEEEeccCCCCcceEEEEEEeccCC--------HHHHHHHHHHHHHHHhcCC----
Confidence            344556688999999999999999998          679999998643        3445678999999999988    


Q ss_pred             CCCCCCcccccccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc----cCCHHHHH
Q psy9184         324 TENSTPCFTELLKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK----YRSPNQTY  399 (562)
Q Consensus       324 ~~n~~p~fv~l~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~----~l~e~~i~  399 (562)
                                            |||+++++++...           ....+|+||||++||++.+.+.    .+++.+++
T Consensus        84 ----------------------~~i~~~~~~~~~~-----------~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~  130 (327)
T 3lxl_A           84 ----------------------DFIVKYRGVSYGP-----------GRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLL  130 (327)
T ss_dssp             ----------------------TTBCCEEEEEECS-----------SSCEEEEEEECCTTCBHHHHHHHHGGGCCHHHHH
T ss_pred             ----------------------CceeEEEEEEecC-----------CCceEEEEEeecCCCCHHHHHHhcccCCCHHHHH
Confidence                                  9999998887542           2457999999999998876654    38999999


Q ss_pred             HHHHHHHHHHHHHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecCCc--------
Q psy9184         400 AMILQVVFSLAVAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVGEK--------  471 (562)
Q Consensus       400 ~I~~QIl~aL~yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~~g--------  471 (562)
                      .++.||+.||.|||+ .||+||||||+|||++.++                    .+||+|||+++......        
T Consensus       131 ~i~~qi~~al~~lH~-~~ivH~Dikp~NIl~~~~~--------------------~~kl~Dfg~~~~~~~~~~~~~~~~~  189 (327)
T 3lxl_A          131 LYSSQICKGMEYLGS-RRCVHRDLAARNILVESEA--------------------HVKIADFGLAKLLPLDKDYYVVREP  189 (327)
T ss_dssp             HHHHHHHHHHHHHHH-TTEECSCCSGGGEEEEETT--------------------EEEECCGGGCEECCTTCSEEECSSC
T ss_pred             HHHHHHHHHHHHHHh-CCccCCCCChhhEEECCCC--------------------CEEEcccccceecccCCccceeecc
Confidence            999999999999999 7999999999999999886                    79999999999765422        


Q ss_pred             EEEeecCCCccccCCC-CCcHHHHHHHhhc
Q psy9184         472 ICYYDLSQDEELFEGE-GDYQFDMYRMMRK  500 (562)
Q Consensus       472 ~v~~~l~~~pelF~g~-~~~q~dIy~lm~~  500 (562)
                      ...+..|++||++.+. .....|||++.-.
T Consensus       190 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~i  219 (327)
T 3lxl_A          190 GQSPIFWYAPESLSDNIFSRQSDVWSFGVV  219 (327)
T ss_dssp             CCSCGGGSCHHHHHHCEEEHHHHHHHHHHH
T ss_pred             CCccccccCHHHhccCCCChHHhHHHHHHH
Confidence            1234448899988764 3556899886433

>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*

Probab=99.94  E-value=6.6e-27  Score=234.74  Aligned_cols=181  Identities=14%  Similarity=0.141  Sum_probs=143.6

Q ss_pred             CCCCCceeeeeeccCceEEEEE-------------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCC
Q psy9184         259 PSSALKNCKKIGEGVYGEVFKL-------------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTE  325 (562)
Q Consensus       259 ~~~~y~~~~~LG~GsfG~Vyka-------------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~  325 (562)
                      ..++|++.+.||+|+||.||+|             ..||+|++....        ....+.+.+|+.+++.++|      
T Consensus         6 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~~--------~~~~~~~~~E~~~l~~l~h------   71 (289)
T 4fvq_A            6 RNEDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAH--------RNYSESFFEAASMMSKLSH------   71 (289)
T ss_dssp             CGGGEEEEEEEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECGGG--------GGGHHHHHHHHHHHHTSCC------
T ss_pred             chhHeeeeeeeccCCCceEEEEEEecccccccccchhhhhhhccccc--------HHHHHHHHHHHHHHHhCCC------
Confidence            3467999999999999999999             249999987532        3445678999999999998      


Q ss_pred             CCCCcccccccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc----cCCHHHHHHH
Q psy9184         326 NSTPCFTELLKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK----YRSPNQTYAM  401 (562)
Q Consensus       326 n~~p~fv~l~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~----~l~e~~i~~I  401 (562)
                                          |||+++++++.+             ++..|+||||+.||++.+.+.    .+++..++.+
T Consensus        72 --------------------~~iv~~~~~~~~-------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i  118 (289)
T 4fvq_A           72 --------------------KHLVLNYGVCVC-------------GDENILVQEFVKFGSLDTYLKKNKNCINILWKLEV  118 (289)
T ss_dssp             --------------------TTBCCEEEEECC-------------TTCCEEEEECCTTCBHHHHHHHTGGGCCHHHHHHH
T ss_pred             --------------------CCEeEEEEEEEe-------------CCCCEEEEECCCCCCHHHHHHhCCCCCCHHHHHHH
Confidence                                999999999875             457899999999998876664    2899999999


Q ss_pred             HHHHHHHHHHHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecCC-cEEEeecCCC
Q psy9184         402 ILQVVFSLAVAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVGE-KICYYDLSQD  480 (562)
Q Consensus       402 ~~QIl~aL~yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~~-g~v~~~l~~~  480 (562)
                      +.||+.||.|||+ .||+||||||+|||++.++...           ... ...+||+|||+++..... ....+..|++
T Consensus       119 ~~qi~~~L~~LH~-~~ivH~Dlkp~NIll~~~~~~~-----------~~~-~~~~kl~Dfg~~~~~~~~~~~~~~~~y~a  185 (289)
T 4fvq_A          119 AKQLAAAMHFLEE-NTLIHGNVCAKNILLIREEDRK-----------TGN-PPFIKLSDPGISITVLPKDILQERIPWVP  185 (289)
T ss_dssp             HHHHHHHHHHHHH-TTCCCCCCCGGGEEEEECCBGG-----------GTB-CCEEEECCCCSCTTTSCHHHHHHTTTTSC
T ss_pred             HHHHHHHHHHHhh-CCeECCCcCcceEEEecCCccc-----------ccc-cceeeeccCcccccccCccccCCcCcccC
Confidence            9999999999999 7999999999999999886210           000 114999999999765431 1223556899


Q ss_pred             ccccCC--CCCcHHHHHHHhh
Q psy9184         481 EELFEG--EGDYQFDMYRMMR  499 (562)
Q Consensus       481 pelF~g--~~~~q~dIy~lm~  499 (562)
                      ||++.+  ......|||++.-
T Consensus       186 PE~~~~~~~~~~~~DiwslG~  206 (289)
T 4fvq_A          186 PECIENPKNLNLATDKWSFGT  206 (289)
T ss_dssp             HHHHHCGGGCCHHHHHHHHHH
T ss_pred             HHHhCCCCCCCchhHHHHHHH
Confidence            998876  3456699988643

>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...

Probab=99.94  E-value=6.4e-26  Score=236.87  Aligned_cols=178  Identities=19%  Similarity=0.219  Sum_probs=144.4

Q ss_pred             CCCCceeeeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCcccc
Q psy9184         260 SSALKNCKKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTE  333 (562)
Q Consensus       260 ~~~y~~~~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~  333 (562)
                      ..+|++.+.||+|+||.||+|      ..||||++....       .......+.+|+.+++.++|              
T Consensus        26 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~-------~~~~~~~~~~E~~~l~~l~h--------------   84 (364)
T 3qyz_A           26 GPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFE-------HQTYCQRTLREIKILLRFRH--------------   84 (364)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCTT-------CHHHHHHHHHHHHHHHHCCC--------------
T ss_pred             cccEEEEEEeecCCCeEEEEEEECCCCeEEEEEEecccc-------CcHHHHHHHHHHHHHHhcCC--------------
Confidence            368999999999999999999      789999997532       24445678999999999998              


Q ss_pred             cccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc--cCCHHHHHHHHHHHHHHHHH
Q psy9184         334 LLKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK--YRSPNQTYAMILQVVFSLAV  411 (562)
Q Consensus       334 l~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~--~l~e~~i~~I~~QIl~aL~y  411 (562)
                                  |||+++++++...        ........|+||||+. |++.+.+.  .+++.+++.++.||+.||.|
T Consensus        85 ------------~niv~~~~~~~~~--------~~~~~~~~~iv~e~~~-~~L~~~l~~~~~~~~~~~~i~~qi~~aL~~  143 (364)
T 3qyz_A           85 ------------ENIIGINDIIRAP--------TIEQMKDVYIVQDLME-TDLYKLLKTQHLSNDHICYFLYQILRGLKY  143 (364)
T ss_dssp             ------------TTBCCCCEEECCS--------STTTCCCEEEEEECCS-EEHHHHHHHCCCCHHHHHHHHHHHHHHHHH
T ss_pred             ------------CCCccceeEEecC--------CccccceEEEEEcccC-cCHHHHHHhCCCCHHHHHHHHHHHHHHHHH
Confidence                        9999999888652        2223457999999997 45555443  48999999999999999999


Q ss_pred             HHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecC--------CcEEEeecCCCccc
Q psy9184         412 AEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVG--------EKICYYDLSQDEEL  483 (562)
Q Consensus       412 LH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~--------~g~v~~~l~~~pel  483 (562)
                      ||+ .||+||||||+|||++.++                    .+||+|||+|+....        ...+++..|++||+
T Consensus       144 LH~-~~ivH~Dikp~NIl~~~~~--------------------~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~  202 (364)
T 3qyz_A          144 IHS-ANVLHRDLKPSNLLLNTTC--------------------DLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEI  202 (364)
T ss_dssp             HHH-TTEECCCCCGGGEEECTTC--------------------CEEECCCTTCEECCGGGCBCCTTCCCCSCGGGCCHHH
T ss_pred             HHH-CCeecCCCChHhEEECCCC--------------------CEEEEeCcceEecCCCCCccccccccccccCCCCCHH
Confidence            999 7999999999999999886                    799999999987653        22356788999997


Q ss_pred             cCCC--CCcHHHHHHHhhc
Q psy9184         484 FEGE--GDYQFDMYRMMRK  500 (562)
Q Consensus       484 F~g~--~~~q~dIy~lm~~  500 (562)
                      +.+.  .....|||++.-.
T Consensus       203 ~~~~~~~~~~~DiwslG~i  221 (364)
T 3qyz_A          203 MLNSKGYTKSIDIWSVGCI  221 (364)
T ss_dssp             HHTBCSCSTHHHHHHHHHH
T ss_pred             hcCCCCCCcchhHHHHHHH
Confidence            6542  4667999886433

>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A

Probab=99.94  E-value=1.6e-26  Score=236.92  Aligned_cols=239  Identities=15%  Similarity=0.154  Sum_probs=170.8

Q ss_pred             CCCceeeeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCccccc
Q psy9184         261 SALKNCKKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTEL  334 (562)
Q Consensus       261 ~~y~~~~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~l  334 (562)
                      ++|++.+.||+|+||.||+|      +.||+|++.........  .....+.+.+|+.+++.++|               
T Consensus        12 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~--~~~~~~~~~~E~~~l~~l~h---------------   74 (321)
T 2a2a_A           12 DFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASR--RGVSREEIEREVSILRQVLH---------------   74 (321)
T ss_dssp             HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSSSCS--SSBCHHHHHHHHHHHHHCCC---------------
T ss_pred             ccEEEeeEeeecCCEEEEEEEECCCCeEEEEEEEecccccccc--cchhHHHHHHHHHHHHhCCC---------------
Confidence            56899999999999999999      78999999875421111  11134678899999999998               


Q ss_pred             ccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc---cCCHHHHHHHHHHHHHHHHH
Q psy9184         335 LKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK---YRSPNQTYAMILQVVFSLAV  411 (562)
Q Consensus       335 ~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~---~l~e~~i~~I~~QIl~aL~y  411 (562)
                                 |||+++++++.+             .+.+|+||||+.||++.+.+.   .+++..++.++.||+.||.|
T Consensus        75 -----------~~iv~~~~~~~~-------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~  130 (321)
T 2a2a_A           75 -----------HNVITLHDVYEN-------------RTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNY  130 (321)
T ss_dssp             -----------TTBCCEEEEEEC-------------SSEEEEEECCCCSCBHHHHHHTCSCEEHHHHHHHHHHHHHHHHH
T ss_pred             -----------CCcceEEEEEec-------------CCEEEEEEEcCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHH
Confidence                       999999999875             558999999999998876664   37899999999999999999


Q ss_pred             HHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecC----CcEEEeecCCCccccCC-
Q psy9184         412 AEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVG----EKICYYDLSQDEELFEG-  486 (562)
Q Consensus       412 LH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~----~g~v~~~l~~~pelF~g-  486 (562)
                      ||+ .||+||||||+|||++.++...                ..++|+|||+++....    ....++..|++||++.+ 
T Consensus       131 lH~-~~ivH~dikp~NIl~~~~~~~~----------------~~~kl~Dfg~~~~~~~~~~~~~~~gt~~y~aPE~~~~~  193 (321)
T 2a2a_A          131 LHT-KKIAHFDLKPENIMLLDKNIPI----------------PHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIVNYE  193 (321)
T ss_dssp             HHH-TTEECCCCSGGGEEESCTTSSS----------------CCEEECCCTTCEECCTTCCCCCCCSCGGGCCHHHHTTC
T ss_pred             HHh-CCeecCCCChHHEEEecCCCCc----------------CCEEEccCccceecCccccccccCCCCCccCcccccCC
Confidence            999 7999999999999998775211                1599999999987654    23345778999998876 


Q ss_pred             CCCcHHHHHHHhhcccCCCCCCCCCCChhhhHHHHHHHHhhcccCCCCCCCchhHHHHHHHHHHHhcCCCcCcCC
Q psy9184         487 EGDYQFDMYRMMRKQCQNNWQNFTPKNNVFWIHYLVDKATCLKKGYQYLRAPRHQAFELLEELGQNALHFDSCYE  561 (562)
Q Consensus       487 ~~~~q~dIy~lm~~~~~~~W~~~~P~tn~~wl~yl~~~Ll~~~~~~~~~~~~~~~~~~~l~~l~~~~l~~~s~~~  561 (562)
                      ..+...|||++.-... ..+.+..|+....-.. ....+......++.  ......-..+.+|...||.++...|
T Consensus       194 ~~~~~~Di~slG~il~-~l~~g~~pf~~~~~~~-~~~~i~~~~~~~~~--~~~~~~~~~~~~li~~~l~~dp~~R  264 (321)
T 2a2a_A          194 PLGLEADMWSIGVITY-ILLSGASPFLGDTKQE-TLANITSVSYDFDE--EFFSHTSELAKDFIRKLLVKETRKR  264 (321)
T ss_dssp             CCCTHHHHHHHHHHHH-HHHHSCCSSCCSSHHH-HHHHHHTTCCCCCH--HHHTTCCHHHHHHHHTTSCSSTTTS
T ss_pred             CCCCccccHHHHHHHH-HHHHCCCCCCCCCHHH-HHHHHHhcccccCh--hhhcccCHHHHHHHHHHcCCChhhC
Confidence            4566799988643332 3344444543221111 11222220111110  0000113467788899998887765

>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*

Probab=99.94  E-value=2e-26  Score=233.48  Aligned_cols=174  Identities=20%  Similarity=0.189  Sum_probs=144.6

Q ss_pred             CCceeeeeeccCceEEEEE----eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCcccccccc
Q psy9184         262 ALKNCKKIGEGVYGEVFKL----NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTELLKC  337 (562)
Q Consensus       262 ~y~~~~~LG~GsfG~Vyka----~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~l~~~  337 (562)
                      .|...+.||+|+||.||+|    ..||+|++.....    .......+.+.+|+.+++.++|                  
T Consensus        32 ~~~~~~~lg~G~~g~Vy~~~~~~~~vavK~~~~~~~----~~~~~~~~~~~~E~~~l~~l~h------------------   89 (307)
T 2nru_A           32 ISVGGNKMGEGGFGVVYKGYVNNTTVAVKKLAAMVD----ITTEELKQQFDQEIKVMAKCQH------------------   89 (307)
T ss_dssp             TTTTCCEEEECSSEEEEEEESSSCEEEEEEECCCTT----SCTTTHHHHHHHHHHHHHHCCC------------------
T ss_pred             ccccCCccccCCCeEEEEEEECCceEEEEEEecccC----cchHHHHHHHHHHHHHHHhcCC------------------
Confidence            3566799999999999999    8999999875431    1123345678899999999998                  


Q ss_pred             cccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc------cCCHHHHHHHHHHHHHHHHH
Q psy9184         338 SCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK------YRSPNQTYAMILQVVFSLAV  411 (562)
Q Consensus       338 ~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~------~l~e~~i~~I~~QIl~aL~y  411 (562)
                              |||+++++++.+             .+..|+||||+++|++.+.+.      .+++..++.++.||+.||.|
T Consensus        90 --------~~i~~~~~~~~~-------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~  148 (307)
T 2nru_A           90 --------ENLVELLGFSSD-------------GDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINF  148 (307)
T ss_dssp             --------TTBCCEEEEECS-------------SSSCEEEEECCTTCBHHHHHHTGGGCCCCCHHHHHHHHHHHHHHHHH
T ss_pred             --------CCeEEEEEEEec-------------CCceEEEEEecCCCcHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHH
Confidence                    999999998865             457899999999998876653      38899999999999999999


Q ss_pred             HHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecC-------CcEEEeecCCCcccc
Q psy9184         412 AEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVG-------EKICYYDLSQDEELF  484 (562)
Q Consensus       412 LH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~-------~g~v~~~l~~~pelF  484 (562)
                      ||+ .||+||||||+|||++.++                    .+||+|||+++....       ....++..|++||++
T Consensus       149 lH~-~~i~H~dlkp~Nili~~~~--------------------~~kl~Dfg~~~~~~~~~~~~~~~~~~g~~~y~aPE~~  207 (307)
T 2nru_A          149 LHE-NHHIHRDIKSANILLDEAF--------------------TAKISDFGLARASEKFAQTVMTSRIVGTTAYMAPEAL  207 (307)
T ss_dssp             HHH-TTEECSCCCGGGEEECTTC--------------------CEEECCCTTCEECCSCSSCEECSSCCSCGGGCCHHHH
T ss_pred             Hhc-CCeecCCCCHHHEEEcCCC--------------------cEEEeecccccccccccccccccccCCCcCcCChHHh
Confidence            999 7999999999999998876                    799999999987653       123457789999999


Q ss_pred             CCCCCcHHHHHHHhh
Q psy9184         485 EGEGDYQFDMYRMMR  499 (562)
Q Consensus       485 ~g~~~~q~dIy~lm~  499 (562)
                      .+..+...|||++.-
T Consensus       208 ~~~~~~~~Dv~slG~  222 (307)
T 2nru_A          208 RGEITPKSDIYSFGV  222 (307)
T ss_dssp             TTEECTHHHHHHHHH
T ss_pred             cCCCCccchhHHHHH
Confidence            887777899988643

>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*

Probab=99.94  E-value=3.8e-26  Score=229.25  Aligned_cols=239  Identities=17%  Similarity=0.157  Sum_probs=166.6

Q ss_pred             CCCCCceeeeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCccc
Q psy9184         259 PSSALKNCKKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFT  332 (562)
Q Consensus       259 ~~~~y~~~~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv  332 (562)
                      ..++|++.+.||+|+||.||+|      +.||+|++....... ........+.+.+|+.+++.++|             
T Consensus        17 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~-~~~~~~~~~~~~~E~~~l~~l~h-------------   82 (287)
T 4f0f_A           17 ADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEG-ETEMIEKFQEFQREVFIMSNLNH-------------   82 (287)
T ss_dssp             CSTTEEEEEECCCCSSSCEEEEEETTTCCEEEEEECCCCTTTC-CHHHHCCSHHHHHHHHHHTTCCC-------------
T ss_pred             hhccceehhccccCCceeEEEEEEcCCceEEEEEEeecccccc-chhHHHHHHHHHHHHHHHHhCCC-------------
Confidence            4578999999999999999999      789999997654211 01111122678899999999988             


Q ss_pred             ccccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc----cCCHHHHHHHHHHHHHH
Q psy9184         333 ELLKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK----YRSPNQTYAMILQVVFS  408 (562)
Q Consensus       333 ~l~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~----~l~e~~i~~I~~QIl~a  408 (562)
                                   |||+++++++.+               ..++||||+.+|++.+.+.    .+++..++.++.||+.|
T Consensus        83 -------------~~i~~~~~~~~~---------------~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~l~~~  134 (287)
T 4f0f_A           83 -------------PNIVKLYGLMHN---------------PPRMVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALG  134 (287)
T ss_dssp             -------------TTBCCEEEEETT---------------TTEEEEECCTTCBHHHHHHCTTSCCCHHHHHHHHHHHHHH
T ss_pred             -------------CCchhhheeecC---------------CCeEEEEecCCCCHHHHHhcccCCccHHHHHHHHHHHHHH
Confidence                         999999998864               2279999999998877663    48999999999999999


Q ss_pred             HHHHHhhCC--eEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecCC--cEEEeecCCCcccc
Q psy9184         409 LAVAEVELE--FEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVGE--KICYYDLSQDEELF  484 (562)
Q Consensus       409 L~yLH~~~~--IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~~--g~v~~~l~~~pelF  484 (562)
                      |.|||+ .|  |+||||||+|||++..+..               ..+.+||+|||+|+.....  ....+..|++||++
T Consensus       135 l~~lH~-~~~~ivH~dikp~Nil~~~~~~~---------------~~~~~kl~Dfg~~~~~~~~~~~~~g~~~y~aPE~~  198 (287)
T 4f0f_A          135 IEYMQN-QNPPIVHRDLRSPNIFLQSLDEN---------------APVCAKVADFGLSQQSVHSVSGLLGNFQWMAPETI  198 (287)
T ss_dssp             HHHHHT-SSSCCBCSCCSGGGEEESCCCTT---------------CSCCEEECCCTTCBCCSSCEECCCCCCTTSCGGGS
T ss_pred             HHHHHh-CCCCeecCCCCcceEEEeccCCC---------------CceeEEeCCCCccccccccccccCCCccccCchhh
Confidence            999999 79  9999999999999876521               1125999999999865542  34457789999998


Q ss_pred             CCC---CCcHHHHHHHhhcccCCCCCCCCCCChhh--hHHHHHHHHhhcccCCCCCCCchhHHHHHHHHHHHhcCCCcCc
Q psy9184         485 EGE---GDYQFDMYRMMRKQCQNNWQNFTPKNNVF--WIHYLVDKATCLKKGYQYLRAPRHQAFELLEELGQNALHFDSC  559 (562)
Q Consensus       485 ~g~---~~~q~dIy~lm~~~~~~~W~~~~P~tn~~--wl~yl~~~Ll~~~~~~~~~~~~~~~~~~~l~~l~~~~l~~~s~  559 (562)
                      .+.   .....|||++.-... ..+.+..|+....  ...+. ..+........-+.    ..-..+.+|...+|.++..
T Consensus       199 ~~~~~~~~~~~Di~slG~~l~-~l~~g~~pf~~~~~~~~~~~-~~~~~~~~~~~~~~----~~~~~l~~li~~~l~~dp~  272 (287)
T 4f0f_A          199 GAEEESYTEKADTYSFAMILY-TILTGEGPFDEYSYGKIKFI-NMIREEGLRPTIPE----DCPPRLRNVIELCWSGDPK  272 (287)
T ss_dssp             SCSSCEECHHHHHHHHHHHHH-HHHHSSCTTTTCCCCHHHHH-HHHHHSCCCCCCCT----TSCHHHHHHHHHHTCSSGG
T ss_pred             ccCCCCcCchhhHHHHHHHHH-HHHcCCCCCccccccHHHHH-HHHhccCCCCCCCc----ccCHHHHHHHHHHhcCChh
Confidence            542   345699988644333 2233333432111  11111 11222011111111    1134677888999998877


Q ss_pred             CC
Q psy9184         560 YE  561 (562)
Q Consensus       560 ~~  561 (562)
                      .|
T Consensus       273 ~R  274 (287)
T 4f0f_A          273 KR  274 (287)
T ss_dssp             GS
T ss_pred             hC
Confidence            65

>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*

Probab=99.94  E-value=3e-26  Score=239.57  Aligned_cols=203  Identities=16%  Similarity=0.166  Sum_probs=148.0

Q ss_pred             CCCCceeeeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCcccc
Q psy9184         260 SSALKNCKKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTE  333 (562)
Q Consensus       260 ~~~y~~~~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~  333 (562)
                      .++|++.++||+|+||.||+|      +.||||++...         ....+.+.+|+.+++.+.|.....++       
T Consensus        36 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~---------~~~~~~~~~E~~~l~~l~~~~~~~~~-------   99 (397)
T 1wak_A           36 NGRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSA---------EHYTETALDEIRLLKSVRNSDPNDPN-------   99 (397)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSC---------HHHHHHHHHHHHHHHHHHHSCTTCGG-------
T ss_pred             CCeEEEEEEeeecCCeeEEEEEecCCCeEEEEEEEecC---------CcchHHHHHHHHHHHHHhhcCCCCCC-------
Confidence            368999999999999999999      78999999743         23446788999999999862221211       


Q ss_pred             cccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc-----cCCHHHHHHHHHHHHHH
Q psy9184         334 LLKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK-----YRSPNQTYAMILQVVFS  408 (562)
Q Consensus       334 l~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~-----~l~e~~i~~I~~QIl~a  408 (562)
                                 ||||+++++.|....         .....+|+||||+ +|.+++.+.     .+++..++.++.||+.|
T Consensus       100 -----------~~~iv~~~~~~~~~~---------~~~~~~~lv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~a  158 (397)
T 1wak_A          100 -----------REMVVQLLDDFKISG---------VNGTHICMVFEVL-GHHLLKWIIKSNYQGLPLPCVKKIIQQVLQG  158 (397)
T ss_dssp             -----------GGGBCCEEEEEEEEE---------TTEEEEEEEECCC-CCBHHHHHHHTTTSCCCHHHHHHHHHHHHHH
T ss_pred             -----------cceeeeeecceeecC---------CCCceEEEEEecc-CccHHHHHHhcccCCCCHHHHHHHHHHHHHH
Confidence                       588999998886321         0144799999999 566766553     38999999999999999


Q ss_pred             HHHHHhhC-CeEeccCCCCCEEEccCCCC------------------------------CcccccCCcccccccCCceEE
Q psy9184         409 LAVAEVEL-EFEHRDLHMSNILVLQTDQD------------------------------ESSFTLDDTHYAMKTAGVQVT  457 (562)
Q Consensus       409 L~yLH~~~-~IiHRDLKpeNILl~~~~~~------------------------------~~~~~~~~~~~~~~~~g~~vK  457 (562)
                      |.|||+ . ||+||||||+|||++.++..                              ...+.... ..........+|
T Consensus       159 L~~lH~-~~givHrDikp~NIll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~k  236 (397)
T 1wak_A          159 LDYLHT-KCRIIHTDIKPENILLSVNEQYIRRLAAEATEWQRSGAPPPSGSAVSTAPATAGNFLVNP-LEPKNAEKLKVK  236 (397)
T ss_dssp             HHHHHH-TTCEECCCCSGGGEEECCCHHHHHHHHHHHC---------------------CCTTSCCT-TSGGGGGGCCEE
T ss_pred             HHHHHH-hCCEecCCCCHHHeeEeccchhhhhhhhhhHHHhhcCCCCCCCCccccCCcccccccccc-cccccccccceE
Confidence            999999 6 99999999999999866410                              00000000 000111234799


Q ss_pred             EEeccceeeecC--CcEEEeecCCCccccCCC-CCcHHHHHHHhhcc
Q psy9184         458 IIDFTISRCFVG--EKICYYDLSQDEELFEGE-GDYQFDMYRMMRKQ  501 (562)
Q Consensus       458 L~DFGLSr~~~~--~g~v~~~l~~~pelF~g~-~~~q~dIy~lm~~~  501 (562)
                      |+|||+|+....  ...+++..|++||++.+. .+...|||++.-..
T Consensus       237 l~DfG~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il  283 (397)
T 1wak_A          237 IADLGNACWVHKHFTEDIQTRQYRSLEVLIGSGYNTPADIWSTACMA  283 (397)
T ss_dssp             ECCGGGCEETTBCSCSCCSCGGGCCHHHHHTSCCCTHHHHHHHHHHH
T ss_pred             eccccccccccccCccCCCCCcccCChhhcCCCCCcHHHHHHHHHHH
Confidence            999999987654  334568889999988774 56679999864443

>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*

Probab=99.93  E-value=6.9e-27  Score=235.28  Aligned_cols=234  Identities=20%  Similarity=0.273  Sum_probs=171.7

Q ss_pred             CCCceeeeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCccccc
Q psy9184         261 SALKNCKKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTEL  334 (562)
Q Consensus       261 ~~y~~~~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~l  334 (562)
                      ++|++.+.||+|+||.||+|      +.||+|++.....      .......+.+|+.+++.++|               
T Consensus        22 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~valK~~~~~~~------~~~~~~~~~~e~~~l~~l~h---------------   80 (287)
T 2wei_A           22 ERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASA------KNKDTSTILREVELLKKLDH---------------   80 (287)
T ss_dssp             HHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGB------SSSCHHHHHHHHHHHHTCCC---------------
T ss_pred             hcceeeEEEcCCCCEEEEEEEEcCCCcEEEEEEeccccc------chHHHHHHHHHHHHHHhccC---------------
Confidence            46899999999999999999      7899999986431      12234678899999999988               


Q ss_pred             ccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc---cCCHHHHHHHHHHHHHHHHH
Q psy9184         335 LKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK---YRSPNQTYAMILQVVFSLAV  411 (562)
Q Consensus       335 ~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~---~l~e~~i~~I~~QIl~aL~y  411 (562)
                                 |||+++++++..             .+..|+||||+.+|++.+.+.   .+++.+++.++.||+.||.|
T Consensus        81 -----------~~i~~~~~~~~~-------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~  136 (287)
T 2wei_A           81 -----------PNIMKLFEILED-------------SSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITY  136 (287)
T ss_dssp             -----------TTBCCEEEEEEC-------------SSEEEEEECCCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHH
T ss_pred             -----------CCccEEEEEEeC-------------CCeEEEEEEccCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHH
Confidence                       999999998875             558999999999998877653   48999999999999999999


Q ss_pred             HHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecCC----cEEEeecCCCccccCCC
Q psy9184         412 AEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVGE----KICYYDLSQDEELFEGE  487 (562)
Q Consensus       412 LH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~~----g~v~~~l~~~pelF~g~  487 (562)
                      ||+ .||+||||||+|||++..+..                 ..+||+|||+++.....    ...++..|++||++.+.
T Consensus       137 LH~-~~i~H~dl~p~NIlv~~~~~~-----------------~~~kL~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~  198 (287)
T 2wei_A          137 MHK-HNIVHRDLKPENILLESKEKD-----------------CDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAPEVLRGT  198 (287)
T ss_dssp             HHH-TTCCCSCCCGGGEEESCSSTT-----------------CCEEECSTTGGGTBCCCSSCSCHHHHHTTCCHHHHTTC
T ss_pred             HHH-CCeeccCCChhhEEEecCCCc-----------------ccEEEeccCcceeecCCCccccccCcccccChHHhcCC
Confidence            999 799999999999999875421                 26999999999866542    22346779999999998


Q ss_pred             CCcHHHHHHHhhcccCCCCCCCCCCChhhhHHHHHHHHhhcccCCCCCCCchhHHHHHHHHHHHhcCCCcCcCC
Q psy9184         488 GDYQFDMYRMMRKQCQNNWQNFTPKNNVFWIHYLVDKATCLKKGYQYLRAPRHQAFELLEELGQNALHFDSCYE  561 (562)
Q Consensus       488 ~~~q~dIy~lm~~~~~~~W~~~~P~tn~~wl~yl~~~Ll~~~~~~~~~~~~~~~~~~~l~~l~~~~l~~~s~~~  561 (562)
                      .....|||++.-... ..+.+..|+...... .+...+.. + .+..........-..+.+|.+.+|.++...|
T Consensus       199 ~~~~~Di~slG~~l~-~l~~g~~p~~~~~~~-~~~~~~~~-~-~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R  268 (287)
T 2wei_A          199 YDEKCDVWSAGVILY-ILLSGTPPFYGKNEY-DILKRVET-G-KYAFDLPQWRTISDDAKDLIRKMLTFHPSLR  268 (287)
T ss_dssp             CCTHHHHHHHHHHHH-HHHHSSCSSCCSSHH-HHHHHHHH-C-CCCCCSGGGTTSCHHHHHHHHHHTCSSGGGS
T ss_pred             CCCchhhHhHHHHHH-HHHhCCCCCCCCCHH-HHHHHHHc-C-CCCCCchhhhhcCHHHHHHHHHHcccChhhC
Confidence            888899998644333 333344444332211 12233333 1 1111111111123467788899998887665

>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}

Probab=99.93  E-value=1e-26  Score=239.18  Aligned_cols=183  Identities=18%  Similarity=0.224  Sum_probs=140.2

Q ss_pred             CCCceeeeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCccccc
Q psy9184         261 SALKNCKKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTEL  334 (562)
Q Consensus       261 ~~y~~~~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~l  334 (562)
                      ++|++.+.||+|+||.||+|      +.||+|++.....       ......+.+|+.+++.++|               
T Consensus         2 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~-------~~~~~~~~~E~~~l~~l~h---------------   59 (324)
T 3mtl_A            2 ETYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHE-------EGAPCTAIREVSLLKDLKH---------------   59 (324)
T ss_dssp             CSEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECC-------------CCCCCCCHHHHSCCCC---------------
T ss_pred             CceEEEEEEcCCCCEEEEEEEECCCCcEEEEEEEecccc-------cccchhHHHHHHHHHhcCC---------------
Confidence            57999999999999999999      7899999976431       1111234579999999998               


Q ss_pred             ccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc----cCCHHHHHHHHHHHHHHHH
Q psy9184         335 LKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK----YRSPNQTYAMILQVVFSLA  410 (562)
Q Consensus       335 ~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~----~l~e~~i~~I~~QIl~aL~  410 (562)
                                 |||+++++++.+             ++.+|+||||+. |++.+.+.    .+++..++.++.||+.||.
T Consensus        60 -----------~~iv~~~~~~~~-------------~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~  114 (324)
T 3mtl_A           60 -----------ANIVTLHDIIHT-------------EKSLTLVFEYLD-KDLKQYLDDCGNIINMHNVKLFLFQLLRGLA  114 (324)
T ss_dssp             -----------TTBCCEEEEEEC-------------SSCEEEEEECCS-EEHHHHHHHTTTCCCHHHHHHHHHHHHHHHH
T ss_pred             -----------CCCCeeeeEEee-------------CCEEEEEecccc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHH
Confidence                       999999999875             558999999998 45655543    3889999999999999999


Q ss_pred             HHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecC-----CcEEEeecCCCccccC
Q psy9184         411 VAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVG-----EKICYYDLSQDEELFE  485 (562)
Q Consensus       411 yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~-----~g~v~~~l~~~pelF~  485 (562)
                      |||+ .||+||||||+|||++.++                    .+||+|||+|+....     ....++..|++||++.
T Consensus       115 ~LH~-~~ivH~Dikp~NIl~~~~~--------------------~~kl~Dfg~a~~~~~~~~~~~~~~~t~~y~aPE~~~  173 (324)
T 3mtl_A          115 YCHR-QKVLHRDLKPQNLLINERG--------------------ELKLADFGLARAKSIPTKTYDNEVVTLWYRPPDILL  173 (324)
T ss_dssp             HHHH-TTEEESSCCGGGEEECTTC--------------------CEEECSSSEEECC------------CGGGCCHHHHT
T ss_pred             HHHH-CCccCCCcCHHHEEECCCC--------------------CEEEccCcccccccCCccccccccCcccccChhhhc
Confidence            9999 7999999999999999886                    799999999986543     2345578899999987


Q ss_pred             CC--CCcHHHHHHHhhcccCCCCCCCCCC
Q psy9184         486 GE--GDYQFDMYRMMRKQCQNNWQNFTPK  512 (562)
Q Consensus       486 g~--~~~q~dIy~lm~~~~~~~W~~~~P~  512 (562)
                      +.  .....|||++.-... ..+.+..|+
T Consensus       174 ~~~~~~~~~DiwslG~il~-~l~~g~~pf  201 (324)
T 3mtl_A          174 GSTDYSTQIDMWGVGCIFY-EMATGRPLF  201 (324)
T ss_dssp             TCCCCCTHHHHHHHHHHHH-HHHHSSCSC
T ss_pred             CCCCCCcHHHHHHHHHHHH-HHHhCCCCC
Confidence            63  466699988644333 233344444

>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}

Probab=99.93  E-value=5.2e-27  Score=243.26  Aligned_cols=180  Identities=16%  Similarity=0.237  Sum_probs=144.2

Q ss_pred             CCCceeeeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCccccc
Q psy9184         261 SALKNCKKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTEL  334 (562)
Q Consensus       261 ~~y~~~~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~l  334 (562)
                      .+|++.+.||+|+||.||+|      +.||||++..................+.+|+.+++.++|               
T Consensus        24 ~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h---------------   88 (335)
T 3dls_A           24 QKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEH---------------   88 (335)
T ss_dssp             HHEEEEEECSSSSSCSEEEEEETTTTEEEEEEEEESTTSCTTSEEEETTTEEEEHHHHHHTTCCC---------------
T ss_pred             cceEEEeEEEecCCEEEEEEEECCCCcEEEEEEEehhhcccccccchHHHHHHHHHHHHHHhCCC---------------
Confidence            46899999999999999999      789999998764221110111123456789999999988               


Q ss_pred             ccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCC-CCccccc---cCCHHHHHHHHHHHHHHHH
Q psy9184         335 LKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGG-NDSGDIK---YRSPNQTYAMILQVVFSLA  410 (562)
Q Consensus       335 ~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG-~ll~~l~---~l~e~~i~~I~~QIl~aL~  410 (562)
                                 |||++++++|.+             .+.+|+||||+.+| ++...+.   .+++..++.++.||+.||.
T Consensus        89 -----------~~Iv~~~~~~~~-------------~~~~~lv~e~~~~g~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~  144 (335)
T 3dls_A           89 -----------ANIIKVLDIFEN-------------QGFFQLVMEKHGSGLDLFAFIDRHPRLDEPLASYIFRQLVSAVG  144 (335)
T ss_dssp             -----------TTBCCEEEEEEC-------------SSEEEEEEECCTTSCBHHHHHHTCCCCCHHHHHHHHHHHHHHHH
T ss_pred             -----------CCEeeEEEEEee-------------CCEEEEEEEeCCCCccHHHHHHhcCCCCHHHHHHHHHHHHHHHH
Confidence                       999999999875             56899999999877 4444443   4899999999999999999


Q ss_pred             HHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecCC----cEEEeecCCCccccCC
Q psy9184         411 VAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVGE----KICYYDLSQDEELFEG  486 (562)
Q Consensus       411 yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~~----g~v~~~l~~~pelF~g  486 (562)
                      |||+ .||+||||||+|||++.++                    .+||+|||+++.....    ...++..|++||++.+
T Consensus       145 ~LH~-~~ivH~Dlkp~NIll~~~~--------------------~~kL~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~  203 (335)
T 3dls_A          145 YLRL-KDIIHRDIKDENIVIAEDF--------------------TIKLIDFGSAAYLERGKLFYTFCGTIEYCAPEVLMG  203 (335)
T ss_dssp             HHHH-TTEECSCCSGGGEEECTTS--------------------CEEECCCTTCEECCTTCCBCEECSCGGGCCHHHHTT
T ss_pred             HHHh-CCeEEeccCHHHEEEcCCC--------------------cEEEeecccceECCCCCceeccCCCccccChhhhcC
Confidence            9999 7999999999999999876                    7999999999877542    3445788999999887


Q ss_pred             CC--CcHHHHHHHhhc
Q psy9184         487 EG--DYQFDMYRMMRK  500 (562)
Q Consensus       487 ~~--~~q~dIy~lm~~  500 (562)
                      ..  ....|||++.-.
T Consensus       204 ~~~~~~~~DiwslG~i  219 (335)
T 3dls_A          204 NPYRGPELEMWSLGVT  219 (335)
T ss_dssp             CCBCSHHHHHHHHHHH
T ss_pred             CCCCCCcccchhHHHH
Confidence            54  456899885433

>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*

Probab=99.93  E-value=2.1e-26  Score=238.68  Aligned_cols=181  Identities=19%  Similarity=0.270  Sum_probs=141.5

Q ss_pred             CCCceeeeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCccccc
Q psy9184         261 SALKNCKKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTEL  334 (562)
Q Consensus       261 ~~y~~~~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~l  334 (562)
                      ++|++.++||+|+||.||+|      +.||+|++......      ......+.+|+.+++.++|               
T Consensus        17 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~------~~~~~~~~~E~~~l~~l~h---------------   75 (351)
T 3mi9_A           17 SKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEK------EGFPITALREIKILQLLKH---------------   75 (351)
T ss_dssp             GGEEEEEECSSCSTTSEEEEEETTTCCEEEEEECCCSSCS------SSSCHHHHHHHHHHHHCCC---------------
T ss_pred             cceeEEEEEecCCCcEEEEEEECCCCCEEEEEEEeccccc------ccchHHHHHHHHHHHhccC---------------
Confidence            67999999999999999999      78999998765321      1222466799999999998               


Q ss_pred             ccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc----cCCHHHHHHHHHHHHHHHH
Q psy9184         335 LKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK----YRSPNQTYAMILQVVFSLA  410 (562)
Q Consensus       335 ~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~----~l~e~~i~~I~~QIl~aL~  410 (562)
                                 |||+++++++.....     +.....+.+|+||||+.+ +++..+.    .+++.+++.++.||+.||.
T Consensus        76 -----------~~iv~~~~~~~~~~~-----~~~~~~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~i~~qi~~~l~  138 (351)
T 3mi9_A           76 -----------ENVVNLIEICRTKAS-----PYNRCKGSIYLVFDFCEH-DLAGLLSNVLVKFTLSEIKRVMQMLLNGLY  138 (351)
T ss_dssp             -----------TTBCCEEEEEEEC-------------CEEEEEEECCSE-EHHHHHHCTTSCCCHHHHHHHHHHHHHHHH
T ss_pred             -----------CCcccHhheeecccc-----ccccCCceEEEEEeccCC-CHHHHHhhccCCCCHHHHHHHHHHHHHHHH
Confidence                       899999888875321     111124579999999985 4544442    4899999999999999999


Q ss_pred             HHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecC---------CcEEEeecCCCc
Q psy9184         411 VAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVG---------EKICYYDLSQDE  481 (562)
Q Consensus       411 yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~---------~g~v~~~l~~~p  481 (562)
                      |||+ .||+||||||+|||++.++                    .+||+|||+|+....         ....++..|++|
T Consensus       139 ~LH~-~~ivH~Dlkp~NIl~~~~~--------------------~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aP  197 (351)
T 3mi9_A          139 YIHR-NKILHRDMKAANVLITRDG--------------------VLKLADFGLARAFSLAKNSQPNRYTNRVVTLWYRPP  197 (351)
T ss_dssp             HHHH-TTEECCCCSGGGEEECTTS--------------------CEEECCCTTCEECCCCSSSSCCCCCSSCSCGGGCCH
T ss_pred             HHHH-CCeeCCCCCHHHEEEcCCC--------------------CEEEccchhcccccccccccccccCCcccccCccCc
Confidence            9999 7999999999999999886                    799999999987642         223457789999


Q ss_pred             cccCCC--CCcHHHHHHHhhc
Q psy9184         482 ELFEGE--GDYQFDMYRMMRK  500 (562)
Q Consensus       482 elF~g~--~~~q~dIy~lm~~  500 (562)
                      |++.+.  .+...|||++.-.
T Consensus       198 E~~~~~~~~~~~~DiwslG~i  218 (351)
T 3mi9_A          198 ELLLGERDYGPPIDLWGAGCI  218 (351)
T ss_dssp             HHHTTCCSCCTHHHHHHHHHH
T ss_pred             hhhcCCCCCCcHhHHHHHHHH
Confidence            988764  4667999886433

>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A

Probab=99.93  E-value=2.8e-26  Score=230.33  Aligned_cols=239  Identities=16%  Similarity=0.227  Sum_probs=162.3

Q ss_pred             CCCceeeeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCccccc
Q psy9184         261 SALKNCKKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTEL  334 (562)
Q Consensus       261 ~~y~~~~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~l  334 (562)
                      ++|++.+.||+|+||.||+|      +.||||++...         ....+.+.+|+.+++.++|               
T Consensus         6 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~---------~~~~~~~~~E~~~l~~l~h---------------   61 (303)
T 1zy4_A            6 SDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHT---------EEKLSTILSEVMLLASLNH---------------   61 (303)
T ss_dssp             HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEEE---------HHHHHHHHHHHHHHTTCCC---------------
T ss_pred             ccchhhheeccCCcEEEEEEEEcCCCeEEEEEEEecc---------HHHHHHHHHHHHHHHhcCc---------------
Confidence            46899999999999999999      78999999743         2345678899999999998               


Q ss_pred             ccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc----cCCHHHHHHHHHHHHHHHH
Q psy9184         335 LKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK----YRSPNQTYAMILQVVFSLA  410 (562)
Q Consensus       335 ~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~----~l~e~~i~~I~~QIl~aL~  410 (562)
                                 |||++++++|.+...-..........+.+|+||||+.||++.+.+.    .+++.+++.++.||+.||.
T Consensus        62 -----------~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~  130 (303)
T 1zy4_A           62 -----------QYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYWRLFRQILEALS  130 (303)
T ss_dssp             -----------TTBCCEEEEEEECCCCCC------CEEEEEEEEECCCSCBHHHHHHHSCGGGCHHHHHHHHHHHHHHHH
T ss_pred             -----------hHHHHHHHHHHhhcchhhhhcccccCCceEEEEecCCCCCHHHhhhccccccchHHHHHHHHHHHHHHH
Confidence                       7777777665432100000001112458999999999998877664    3778999999999999999


Q ss_pred             HHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecC-------------------Cc
Q psy9184         411 VAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVG-------------------EK  471 (562)
Q Consensus       411 yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~-------------------~g  471 (562)
                      |||+ .||+||||||+|||++.++                    .+||+|||+++....                   ..
T Consensus       131 ~LH~-~~i~H~dlkp~Nil~~~~~--------------------~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~  189 (303)
T 1zy4_A          131 YIHS-QGIIHRDLKPMNIFIDESR--------------------NVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTS  189 (303)
T ss_dssp             HHHH-TTCCCSCCCGGGEEECTTS--------------------CEEECCCCCCSCTTC---------------------
T ss_pred             HHHh-CCeecccCCHHhEEEcCCC--------------------CEEEeeCcchhhcccccchhcccccccccccccccc
Confidence            9999 7999999999999998876                    799999999986532                   23


Q ss_pred             EEEeecCCCccccCCC--CCcHHHHHHHhhcccCCCCCCCCCCChhhhHHHHHHHHhhcccCCCCCCCchhHHHHHHHHH
Q psy9184         472 ICYYDLSQDEELFEGE--GDYQFDMYRMMRKQCQNNWQNFTPKNNVFWIHYLVDKATCLKKGYQYLRAPRHQAFELLEEL  549 (562)
Q Consensus       472 ~v~~~l~~~pelF~g~--~~~q~dIy~lm~~~~~~~W~~~~P~tn~~wl~yl~~~Ll~~~~~~~~~~~~~~~~~~~l~~l  549 (562)
                      ..++..|++||++.+.  .+...|||++.-... ..+.   |+....-...+...+......++....  ......+.+|
T Consensus       190 ~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~-~l~~---p~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~l  263 (303)
T 1zy4_A          190 AIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFF-EMIY---PFSTGMERVNILKKLRSVSIEFPPDFD--DNKMKVEKKI  263 (303)
T ss_dssp             ----CTTSCHHHHTSCSCCCTHHHHHHHHHHHH-HHHS---CCSSHHHHHHHHHHHHSTTCCCCTTCC--TTTSHHHHHH
T ss_pred             CCCcccccCcccccCCCCCcchhhHHHHHHHHH-HHHh---ccCCchhHHHHHHhccccccccCcccc--ccchHHHHHH
Confidence            3467789999998764  566799998644333 2222   332211112222333331222222211  1123456778


Q ss_pred             HHhcCCCcCcCC
Q psy9184         550 GQNALHFDSCYE  561 (562)
Q Consensus       550 ~~~~l~~~s~~~  561 (562)
                      .+.+|..+...|
T Consensus       264 i~~~l~~dp~~R  275 (303)
T 1zy4_A          264 IRLLIDHDPNKR  275 (303)
T ss_dssp             HHHHTCSSGGGS
T ss_pred             HHHHHhcCcccC
Confidence            888888877655

>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...

Probab=99.93  E-value=5.1e-26  Score=239.25  Aligned_cols=178  Identities=18%  Similarity=0.289  Sum_probs=129.2

Q ss_pred             CCCceeeeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCccccc
Q psy9184         261 SALKNCKKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTEL  334 (562)
Q Consensus       261 ~~y~~~~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~l  334 (562)
                      ++|++.+.||+|+||.||+|      +.||||++....      ........+.+|+.+++.++|               
T Consensus        29 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~------~~~~~~~~~~~E~~~l~~l~h---------------   87 (367)
T 2fst_X           29 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPF------QSIIHAKRTYRELRLLKHMKH---------------   87 (367)
T ss_dssp             TTEEEEEECC----CCEEEEEETTTTEEEEEEECSSTT------SSHHHHHHHHHHHHHHHHCCC---------------
T ss_pred             CceEEeeEEeecCCeEEEEEEECCCCCEEEEEEeCccc------cCHHHHHHHHHHHHHHHhCCC---------------
Confidence            68999999999999999999      799999997542      123445678899999999998               


Q ss_pred             ccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc--cCCHHHHHHHHHHHHHHHHHH
Q psy9184         335 LKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK--YRSPNQTYAMILQVVFSLAVA  412 (562)
Q Consensus       335 ~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~--~l~e~~i~~I~~QIl~aL~yL  412 (562)
                                 |||++++++|....       .......+|+|||++ ++++.+.+.  .+++..++.++.||+.||.||
T Consensus        88 -----------pnIv~~~~~~~~~~-------~~~~~~~~~lv~e~~-~~~L~~~~~~~~l~~~~~~~i~~qi~~aL~~L  148 (367)
T 2fst_X           88 -----------ENVIGLLDVFTPAR-------SLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHVQFLIYQILRGLKYI  148 (367)
T ss_dssp             -----------TTBCCCSEEECSCS-------SGGGCCCCEEEEECC-CEECC-----CCCCHHHHHHHHHHHHHHHHHH
T ss_pred             -----------CCCCcEEEEEecCC-------ccccCCeEEEEeccc-CCCHHHHHhcCCCCHHHHHHHHHHHHHHHHHH
Confidence                       88888888876421       111235689999999 465555443  489999999999999999999


Q ss_pred             HhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecC--CcEEEeecCCCccccCC--CC
Q psy9184         413 EVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVG--EKICYYDLSQDEELFEG--EG  488 (562)
Q Consensus       413 H~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~--~g~v~~~l~~~pelF~g--~~  488 (562)
                      |+ .||+||||||+|||++.++                    .+||+|||+|+....  .+.+++..|++||++.+  ..
T Consensus       149 H~-~givH~Dlkp~NIll~~~~--------------------~~kL~DFG~a~~~~~~~~~~~~t~~y~aPE~~~~~~~~  207 (367)
T 2fst_X          149 HS-ADIIHRDLKPSNLAVNEDC--------------------ELKILDFGLARHTADEMTGYVATRWYRAPEIMLNWMHY  207 (367)
T ss_dssp             HH-TTCCCCCCCGGGEEECTTC--------------------CEEECC---------------CCCTTCCHHHHTTCCSC
T ss_pred             HH-CCeeeCCCCHhhEEECCCC--------------------CEEEeeccccccccccCCCcCcCcCccChHHHcCCcCC
Confidence            99 7999999999999999886                    799999999987654  34566888999999876  34


Q ss_pred             CcHHHHHHHhh
Q psy9184         489 DYQFDMYRMMR  499 (562)
Q Consensus       489 ~~q~dIy~lm~  499 (562)
                      +...|||++.-
T Consensus       208 ~~~~DiwslG~  218 (367)
T 2fst_X          208 NQTVDIWSVGC  218 (367)
T ss_dssp             CTTHHHHHHHH
T ss_pred             CchhhHHHHHH
Confidence            55699988643

>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A

Probab=99.93  E-value=1.4e-26  Score=241.93  Aligned_cols=188  Identities=19%  Similarity=0.194  Sum_probs=136.7

Q ss_pred             CCCCCceeeeeeccCceEEEEE-----------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCC
Q psy9184         259 PSSALKNCKKIGEGVYGEVFKL-----------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENS  327 (562)
Q Consensus       259 ~~~~y~~~~~LG~GsfG~Vyka-----------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~  327 (562)
                      ...+|++.+.||+|+||.||+|           +.||||++....            ..+.+|+.+++.+.+        
T Consensus        33 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~------------~~~~~e~~~~~~~~~--------   92 (364)
T 3op5_A           33 AAAAWKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDN------------GPLFTELKFYQRAAK--------   92 (364)
T ss_dssp             TCCEEEEEEECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTC------------HHHHHHHHHHHHHCC--------
T ss_pred             CCCeEEEEEEEecCCCeEEEEeeecCccccccccceEEEEeeccc------------hhHHHHHHHHHhhhh--------
Confidence            3468999999999999999999           469999998653            133445555554443        


Q ss_pred             CCcccccccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc----cCCHHHHHHHHH
Q psy9184         328 TPCFTELLKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK----YRSPNQTYAMIL  403 (562)
Q Consensus       328 ~p~fv~l~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~----~l~e~~i~~I~~  403 (562)
                       ++++  ........-.||||+++++++....         ......|+||||+ ||++.+.+.    .+++.+++.++.
T Consensus        93 -~~~~--~e~~~~~~l~h~~iv~~~~~~~~~~---------~~~~~~~lv~e~~-g~~L~~~~~~~~~~l~~~~~~~i~~  159 (364)
T 3op5_A           93 -PEQI--QKWIRTRKLKYLGVPKYWGSGLHDK---------NGKSYRFMIMDRF-GSDLQKIYEANAKRFSRKTVLQLSL  159 (364)
T ss_dssp             -HHHH--HHHHHHTTCSCCCSCCEEEEEEEEE---------TTEEEEEEEEECE-EEEHHHHHHHTTSCCCHHHHHHHHH
T ss_pred             -hHHH--HHHHHHhhccCCCCCeEEeeeeecc---------CCcceEEEEEeCC-CCCHHHHHHhccCCCCHHHHHHHHH
Confidence             1100  0000111112499999999887532         0124689999999 787766553    489999999999


Q ss_pred             HHHHHHHHHHhhCCeEeccCCCCCEEEc--cCCCCCcccccCCcccccccCCceEEEEeccceeeecCC-----------
Q psy9184         404 QVVFSLAVAEVELEFEHRDLHMSNILVL--QTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVGE-----------  470 (562)
Q Consensus       404 QIl~aL~yLH~~~~IiHRDLKpeNILl~--~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~~-----------  470 (562)
                      ||+.||.|||+ .||+||||||+|||++  .++                    .+||+|||+|+.....           
T Consensus       160 qi~~~l~~lH~-~~iiHrDlkp~Nill~~~~~~--------------------~~kl~DFG~a~~~~~~~~~~~~~~~~~  218 (364)
T 3op5_A          160 RILDILEYIHE-HEYVHGDIKASNLLLNYKNPD--------------------QVYLVDYGLAYRYCPEGVHKAYAADPK  218 (364)
T ss_dssp             HHHHHHHHHHH-TTEECCCCCGGGEEEESSCTT--------------------CEEECCCTTCEESSGGGCCCCSSCCSS
T ss_pred             HHHHHHHHHHH-CCeEEecCCHHHEEEecCCCC--------------------eEEEEECCcceecccCCcccccccCcc
Confidence            99999999999 7999999999999998  443                    7999999999876532           


Q ss_pred             -cEEEeecCCCccccCCC-CCcHHHHHHHhhc
Q psy9184         471 -KICYYDLSQDEELFEGE-GDYQFDMYRMMRK  500 (562)
Q Consensus       471 -g~v~~~l~~~pelF~g~-~~~q~dIy~lm~~  500 (562)
                       ...++..|++||++.+. .+...|||++.-.
T Consensus       219 ~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~  250 (364)
T 3op5_A          219 RCHDGTIEFTSIDAHNGVAPSRRGDLEILGYC  250 (364)
T ss_dssp             CCCCCCTTTCCHHHHTTCCCCHHHHHHHHHHH
T ss_pred             cccCCCCCccCHHHhCCCCCCchhhHHHHHHH
Confidence             22367789999998884 5667999886433

>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B

Probab=99.93  E-value=9.3e-27  Score=251.30  Aligned_cols=171  Identities=25%  Similarity=0.300  Sum_probs=143.5

Q ss_pred             CCCCCceeeeeeccCceEEEEE-----eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCcccc
Q psy9184         259 PSSALKNCKKIGEGVYGEVFKL-----NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTE  333 (562)
Q Consensus       259 ~~~~y~~~~~LG~GsfG~Vyka-----~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~  333 (562)
                      +.++|++.+.||+|+||.||+|     ..||||+++...         ...+.+.+|+.+++.++|              
T Consensus       186 ~~~~~~~~~~lG~G~fg~V~~~~~~~~~~vavK~~~~~~---------~~~~~~~~E~~~l~~l~h--------------  242 (454)
T 1qcf_A          186 PRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGS---------MSVEAFLAEANVMKTLQH--------------  242 (454)
T ss_dssp             CGGGEEEEEEEECCSSEEEEEEEETTTEEEEEEEECTTS---------BCHHHHHHHHHHHTTCCC--------------
T ss_pred             chHHeEEEEEcccCCceEEEEEEECCccEEEEEEecCCC---------ccHHHHHHHHHHHhhCCC--------------
Confidence            4467899999999999999999     689999998642         124678999999999998              


Q ss_pred             cccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc-----cCCHHHHHHHHHHHHHH
Q psy9184         334 LLKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK-----YRSPNQTYAMILQVVFS  408 (562)
Q Consensus       334 l~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~-----~l~e~~i~~I~~QIl~a  408 (562)
                                  |||+++++++.              .+.+|+||||+.+|++.+.+.     .+++.++..++.||+.|
T Consensus       243 ------------~~iv~l~~~~~--------------~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~  296 (454)
T 1qcf_A          243 ------------DKLVKLHAVVT--------------KEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEG  296 (454)
T ss_dssp             ------------TTBCCEEEEEC--------------SSSCEEEECCCTTCBHHHHHHSHHHHTCCHHHHHHHHHHHHHH
T ss_pred             ------------CCEeeEEEEEe--------------CCccEEEEeecCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHH
Confidence                        99999998874              346899999999998887775     48899999999999999


Q ss_pred             HHHHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecC------CcEEEeecCCCcc
Q psy9184         409 LAVAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVG------EKICYYDLSQDEE  482 (562)
Q Consensus       409 L~yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~------~g~v~~~l~~~pe  482 (562)
                      |+|||+ .+|+||||||+|||++.++                    .+||+|||+|+....      .+..++..|++||
T Consensus       297 l~~LH~-~~ivHrDlkp~Nill~~~~--------------------~~kl~DFG~a~~~~~~~~~~~~~~~~~~~y~aPE  355 (454)
T 1qcf_A          297 MAFIEQ-RNYIHRDLRAANILVSASL--------------------VCKIADFGLARVIEDNEYTAREGAKFPIKWTAPE  355 (454)
T ss_dssp             HHHHHH-TTCCCSSCSGGGEEECTTC--------------------CEEECSTTGGGGBCCHHHHTTCSSSSCGGGSCHH
T ss_pred             HHHHHh-CCccCCCCCHHHEEECCCC--------------------cEEEeeCCCceEcCCCceeccCCCcccccccCHH
Confidence            999999 7999999999999999876                    799999999987643      2333455689999


Q ss_pred             ccCC-CCCcHHHHHHHhh
Q psy9184         483 LFEG-EGDYQFDMYRMMR  499 (562)
Q Consensus       483 lF~g-~~~~q~dIy~lm~  499 (562)
                      ++.+ ..+...|||++.-
T Consensus       356 ~~~~~~~~~~~DvwslG~  373 (454)
T 1qcf_A          356 AINFGSFTIKSDVWSFGI  373 (454)
T ss_dssp             HHHHCCCCHHHHHHHHHH
T ss_pred             HhccCCCCcHHHHHhHHH
Confidence            8874 5566799988643

>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*

Probab=99.93  E-value=6.8e-27  Score=240.29  Aligned_cols=176  Identities=16%  Similarity=0.197  Sum_probs=140.5

Q ss_pred             ccCCCCCCceeeeeeccCceEEEEE------e----eEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCC
Q psy9184         256 DRYPSSALKNCKKIGEGVYGEVFKL------N----NSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTE  325 (562)
Q Consensus       256 ~~~~~~~y~~~~~LG~GsfG~Vyka------~----~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~  325 (562)
                      ..+...+|++.+.||+|+||.||+|      .    .||+|.+.....       ......+.+|+.+++.++|      
T Consensus         8 ~~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~~K~~~~~~~-------~~~~~~~~~e~~~l~~l~h------   74 (325)
T 3kex_A            8 RIFKETELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSG-------RQSFQAVTDHMLAIGSLDH------   74 (325)
T ss_dssp             CBCCTTTEEEEEEEECCSSCEEEEEEECCTTCSCCEEEEEEEECCTTS-------CSCBCSCCHHHHHHHTCCC------
T ss_pred             hhcCHhHceeeeeeeecCCceEEEEEEcCCCceEEEEEEEEecccccc-------HHHHHHHHHHHHHHhcCCC------
Confidence            3455688999999999999999999      2    378888764321       1122356789999999998      


Q ss_pred             CCCCcccccccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc----cCCHHHHHHH
Q psy9184         326 NSTPCFTELLKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK----YRSPNQTYAM  401 (562)
Q Consensus       326 n~~p~fv~l~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~----~l~e~~i~~I  401 (562)
                                          |||+++++++.              ++..++||||+.+|++.+.+.    .+++..++.+
T Consensus        75 --------------------~~iv~~~~~~~--------------~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~  120 (325)
T 3kex_A           75 --------------------AHIVRLLGLCP--------------GSSLQLVTQYLPLGSLLDHVRQHRGALGPQLLLNW  120 (325)
T ss_dssp             --------------------TTBCCEEEEEC--------------BSSEEEEEECCTTCBSHHHHHSSGGGSCTTHHHHH
T ss_pred             --------------------CCcCeEEEEEc--------------CCccEEEEEeCCCCCHHHHHHHccccCCHHHHHHH
Confidence                                99999998875              346899999999999987763    4889999999


Q ss_pred             HHHHHHHHHHHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecC-------CcEEE
Q psy9184         402 ILQVVFSLAVAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVG-------EKICY  474 (562)
Q Consensus       402 ~~QIl~aL~yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~-------~g~v~  474 (562)
                      +.||+.||.|||+ .||+||||||+|||++.++                    .+||+|||+|+....       .....
T Consensus       121 ~~qi~~~l~~lH~-~~ivH~Dikp~Nil~~~~~--------------------~~kl~Dfg~a~~~~~~~~~~~~~~~~~  179 (325)
T 3kex_A          121 GVQIAKGMYYLEE-HGMVHRNLAARNVLLKSPS--------------------QVQVADFGVADLLPPDDKQLLYSEAKT  179 (325)
T ss_dssp             HHHHHHHHHHHHH-TTCCCSCCSSTTEEESSSS--------------------CEEECSCSGGGGSCCCTTCCC-----C
T ss_pred             HHHHHHHHHHHHh-CCCCCCccchheEEECCCC--------------------eEEECCCCcccccCcccccccccCCCC
Confidence            9999999999999 7999999999999998876                    799999999987643       22333


Q ss_pred             eecCCCccccCC-CCCcHHHHHHHhh
Q psy9184         475 YDLSQDEELFEG-EGDYQFDMYRMMR  499 (562)
Q Consensus       475 ~~l~~~pelF~g-~~~~q~dIy~lm~  499 (562)
                      +..|++||.+.+ ..+...|||++.-
T Consensus       180 ~~~y~aPE~~~~~~~~~~~Di~slG~  205 (325)
T 3kex_A          180 PIKWMALESIHFGKYTHQSDVWSYGV  205 (325)
T ss_dssp             CTTTSCHHHHHHCCCCHHHHHHHHHH
T ss_pred             cccccChHHhccCCCChhhHhHHhHH
Confidence            457899998875 4566799988543

>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A

Probab=99.93  E-value=1.1e-26  Score=235.62  Aligned_cols=232  Identities=17%  Similarity=0.175  Sum_probs=162.7

Q ss_pred             CCCceeeeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCccccc
Q psy9184         261 SALKNCKKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTEL  334 (562)
Q Consensus       261 ~~y~~~~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~l  334 (562)
                      ++|.+.+.||+|+||.||+|      +.||+|++....        ......+.+|+.+++.++|               
T Consensus         9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~--------~~~~~~~~~e~~~l~~l~h---------------   65 (304)
T 2jam_A            9 KTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSP--------AFRDSSLENEIAVLKKIKH---------------   65 (304)
T ss_dssp             HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECC--------------HHHHHHHHHHHCCC---------------
T ss_pred             ccceeeeeccCCCCceEEEEEECCCCCEEEEEEEeccc--------ccchHHHHHHHHHHHhCCC---------------
Confidence            46899999999999999999      789999998643        1122467899999999998               


Q ss_pred             ccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc---cCCHHHHHHHHHHHHHHHHH
Q psy9184         335 LKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK---YRSPNQTYAMILQVVFSLAV  411 (562)
Q Consensus       335 ~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~---~l~e~~i~~I~~QIl~aL~y  411 (562)
                                 |||+++++++.+             .+..|+||||+.||++.+.+.   .+++.+++.++.||+.||.|
T Consensus        66 -----------~~i~~~~~~~~~-------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~  121 (304)
T 2jam_A           66 -----------ENIVTLEDIYES-------------TTHYYLVMQLVSGGELFDRILERGVYTEKDASLVIQQVLSAVKY  121 (304)
T ss_dssp             -----------TTBCCEEEEEEC-------------SSEEEEEECCCCSCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHH
T ss_pred             -----------CCeeehhhhccc-------------CCEEEEEEEcCCCccHHHHHHHcCCCCHHHHHHHHHHHHHHHHH
Confidence                       999999998875             558999999999998877664   48999999999999999999


Q ss_pred             HHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecCC---cEEEeecCCCccccCCC-
Q psy9184         412 AEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVGE---KICYYDLSQDEELFEGE-  487 (562)
Q Consensus       412 LH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~~---g~v~~~l~~~pelF~g~-  487 (562)
                      ||+ .||+||||||+|||+...+.                 +..++|+|||+++.....   ...++..|++||++.+. 
T Consensus       122 lH~-~~i~H~dikp~NIl~~~~~~-----------------~~~~kl~Dfg~~~~~~~~~~~~~~~~~~y~aPE~~~~~~  183 (304)
T 2jam_A          122 LHE-NGIVHRDLKPENLLYLTPEE-----------------NSKIMITDFGLSKMEQNGIMSTACGTPGYVAPEVLAQKP  183 (304)
T ss_dssp             HHH-TTCCCCSCCGGGCEESSSST-----------------TCCEEBCSCSTTCCCCCBTTHHHHSCCCBCCTTTBSSCS
T ss_pred             HHH-CCccccCCCHHHEEEecCCC-----------------CCCEEEccCCcceecCCCccccccCCCCccChHHhccCC
Confidence            999 79999999999999943211                 017999999999865431   22346778999998874 


Q ss_pred             CCcHHHHHHHhhcccCCCCCCCCCCChhhhHHHHHHHHhhcccCCCCCCCchhHHHHHHHHHHHhcCCCcCcCC
Q psy9184         488 GDYQFDMYRMMRKQCQNNWQNFTPKNNVFWIHYLVDKATCLKKGYQYLRAPRHQAFELLEELGQNALHFDSCYE  561 (562)
Q Consensus       488 ~~~q~dIy~lm~~~~~~~W~~~~P~tn~~wl~yl~~~Ll~~~~~~~~~~~~~~~~~~~l~~l~~~~l~~~s~~~  561 (562)
                      .+...|||++.-.. ...+.+..|+.... ...+...+......+....  ....-..+.+|...+|..+...|
T Consensus       184 ~~~~~Di~slG~il-~~l~~g~~pf~~~~-~~~~~~~i~~~~~~~~~~~--~~~~~~~~~~li~~~l~~dp~~R  253 (304)
T 2jam_A          184 YSKAVDCWSIGVIT-YILLCGYPPFYEET-ESKLFEKIKEGYYEFESPF--WDDISESAKDFICHLLEKDPNER  253 (304)
T ss_dssp             CCHHHHHHHHHHHH-HHHHHSSCTTTTSC-HHHHHHHHHHCCCCCCTTT--TTTSCHHHHHHHHHHHCSSTTTS
T ss_pred             CCchhhHHHHHHHH-HHHHHCCCCCCCCC-HHHHHHHHHcCCCCCCccc--cccCCHHHHHHHHHHcCCChhHC
Confidence            56679999864332 23333444442221 1112222333111121111  01113456677777777776654

>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}

Probab=99.93  E-value=1.3e-26  Score=236.44  Aligned_cols=173  Identities=20%  Similarity=0.270  Sum_probs=139.0

Q ss_pred             CCCceeeeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCccccc
Q psy9184         261 SALKNCKKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTEL  334 (562)
Q Consensus       261 ~~y~~~~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~l  334 (562)
                      ++|++.+.||+|+||.||+|      +.||+|++....     .......+.+.+|+.+++.++|               
T Consensus        34 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~-----~~~~~~~~~~~~e~~~l~~l~h---------------   93 (309)
T 2h34_A           34 GPYRLRRLVGRGGMGDVYEAEDTVRERIVALKLMSETL-----SSDPVFRTRMQREARTAGRLQE---------------   93 (309)
T ss_dssp             CCEEEEEEEEECSSSEEEEEEETTTTEEEEEEECGGGG-----GGSHHHHHHHHHHHHHHTTCCC---------------
T ss_pred             ccEEEEEEEcCCCCeeEEEEEEcCCCeEEEEEecCccc-----ccCHHHHHHHHHHHHHHhhcCC---------------
Confidence            67999999999999999999      789999998643     2234445778899999999988               


Q ss_pred             ccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc---cCCHHHHHHHHHHHHHHHHH
Q psy9184         335 LKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK---YRSPNQTYAMILQVVFSLAV  411 (562)
Q Consensus       335 ~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~---~l~e~~i~~I~~QIl~aL~y  411 (562)
                                 |||+++++++..             ++.+|+||||++||++.+.+.   .+++.+++.++.||+.||.|
T Consensus        94 -----------p~iv~~~~~~~~-------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~  149 (309)
T 2h34_A           94 -----------PHVVPIHDFGEI-------------DGQLYVDMRLINGVDLAAMLRRQGPLAPPRAVAIVRQIGSALDA  149 (309)
T ss_dssp             -----------TTBCCEEEEEEE-------------TTEEEEEEECCCCEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHH
T ss_pred             -----------CCeeEEEEEEee-------------CCeEEEEEEecCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHH
Confidence                       999999998875             558999999999887776654   48999999999999999999


Q ss_pred             HHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecCC------cEEEeecCCCccccC
Q psy9184         412 AEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVGE------KICYYDLSQDEELFE  485 (562)
Q Consensus       412 LH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~~------g~v~~~l~~~pelF~  485 (562)
                      ||+ .||+||||||+|||++.++                    .+||+|||+++.....      ...++..|++||++.
T Consensus       150 lH~-~~i~H~dlkp~NIl~~~~~--------------------~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~  208 (309)
T 2h34_A          150 AHA-AGATHRDVKPENILVSADD--------------------FAYLVDFGIASATTDEKLTQLGNTVGTLYYMAPERFS  208 (309)
T ss_dssp             HHH-TTCCCSCCCGGGEEECTTS--------------------CEEECSCCC----------------CCGGGCCGGGTC
T ss_pred             HHH-CcCCcCCCChHHEEEcCCC--------------------CEEEecCccCccccccccccccccCCCcCccCHHHHc
Confidence            999 7999999999999999876                    7999999999876542      334577899999987


Q ss_pred             CC-CCcHHHHHHHh
Q psy9184         486 GE-GDYQFDMYRMM  498 (562)
Q Consensus       486 g~-~~~q~dIy~lm  498 (562)
                      +. .....|||++.
T Consensus       209 ~~~~~~~~Di~slG  222 (309)
T 2h34_A          209 ESHATYRADIYALT  222 (309)
T ss_dssp             C----CCCHHHHHH
T ss_pred             CCCCCchHhHHHHH
Confidence            63 45568998863

>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*

Probab=99.93  E-value=2.7e-26  Score=233.47  Aligned_cols=179  Identities=18%  Similarity=0.199  Sum_probs=135.4

Q ss_pred             CCCCCceeeeeeccCceEEEEE---------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCC
Q psy9184         259 PSSALKNCKKIGEGVYGEVFKL---------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTP  329 (562)
Q Consensus       259 ~~~~y~~~~~LG~GsfG~Vyka---------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p  329 (562)
                      ..++|.+.+.||+|+||.||+|         ..||+|++....      ......+.+.+|+.+++.++|          
T Consensus        32 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~------~~~~~~~~~~~e~~~l~~l~h----------   95 (313)
T 3brb_A           32 DRNLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDN------SSQREIEEFLSEAACMKDFSH----------   95 (313)
T ss_dssp             CGGGEEEEEEEEC-CCCCEEEEEEECTTSCEEEEEEEEC---C------CCHHHHHHHHHHHHHHHTCCC----------
T ss_pred             CHHHeeeccceeecCCeEEEEEEEeccCCceeEEEEEEEeccc------cchhHHHHHHHHHHHHhcCCC----------
Confidence            3467999999999999999998         379999998653      234455778999999999998          


Q ss_pred             cccccccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCcccc---------ccCCHHHHHH
Q psy9184         330 CFTELLKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDI---------KYRSPNQTYA  400 (562)
Q Consensus       330 ~fv~l~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l---------~~l~e~~i~~  400 (562)
                                      |||+++++++....        .......|+||||+.+|++.+.+         ..+++.+++.
T Consensus        96 ----------------~~iv~~~~~~~~~~--------~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~  151 (313)
T 3brb_A           96 ----------------PNVIRLLGVCIEMS--------SQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLK  151 (313)
T ss_dssp             ----------------TTBCCCCEEEEC---------------CEEEEEECCTTCBHHHHHHHTTBTTSCCCCCHHHHHH
T ss_pred             ----------------CCeeeeeEEEeecc--------ccCCcccEEEEecccCCCHHHHHHHhhhhcCCccCCHHHHHH
Confidence                            99999998886522        01123579999999999886655         2389999999


Q ss_pred             HHHHHHHHHHHHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecCC-------cEE
Q psy9184         401 MILQVVFSLAVAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVGE-------KIC  473 (562)
Q Consensus       401 I~~QIl~aL~yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~~-------g~v  473 (562)
                      ++.||+.||.|||+ .||+||||||+|||++.++                    .+||+|||+++.....       ...
T Consensus       152 i~~qi~~aL~~LH~-~~ivH~dikp~NIli~~~~--------------------~~kl~Dfg~~~~~~~~~~~~~~~~~~  210 (313)
T 3brb_A          152 FMVDIALGMEYLSN-RNFLHRDLAARNCMLRDDM--------------------TVCVADFGLSKKIYSGDYYRQGRIAK  210 (313)
T ss_dssp             HHHHHHHHHHHHHT-TTCCCCCCSGGGEEECTTS--------------------CEEECSCSCC----------------
T ss_pred             HHHHHHHHHHHHHh-CCcccCCCCcceEEEcCCC--------------------cEEEeecCcceecccccccCcccccC
Confidence            99999999999999 7999999999999999886                    7999999999876432       122


Q ss_pred             EeecCCCccccCCC-CCcHHHHHHHh
Q psy9184         474 YYDLSQDEELFEGE-GDYQFDMYRMM  498 (562)
Q Consensus       474 ~~~l~~~pelF~g~-~~~q~dIy~lm  498 (562)
                      .+..|.+||.+.+. .+...|||++.
T Consensus       211 ~~~~y~aPE~~~~~~~~~~~Di~slG  236 (313)
T 3brb_A          211 MPVKWIAIESLADRVYTSKSDVWAFG  236 (313)
T ss_dssp             CCGGGSCHHHHHSSCCCHHHHHHHHH
T ss_pred             CCccccCchhhcCCCccchhhhHHHH
Confidence            34568899988763 56679998864

>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...

Probab=99.93  E-value=7e-27  Score=240.64  Aligned_cols=172  Identities=20%  Similarity=0.178  Sum_probs=137.9

Q ss_pred             CCCCCceeeeeeccCceEEEEE----------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCC
Q psy9184         259 PSSALKNCKKIGEGVYGEVFKL----------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENST  328 (562)
Q Consensus       259 ~~~~y~~~~~LG~GsfG~Vyka----------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~  328 (562)
                      ...+|++.++||+|+||.||+|          ..||+|.+....       .......+.+|+.+++.++|         
T Consensus        13 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~-------~~~~~~~~~~E~~~l~~l~h---------   76 (327)
T 3poz_A           13 KETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREAT-------SPKANKEILDEAYVMASVDN---------   76 (327)
T ss_dssp             CGGGEEEEEEEEEETTEEEEEEEECC----CCEEEEEEEC--------------CHHHHHHHHHHHHHCCB---------
T ss_pred             CHHHcccceEEeeCCCeEEEEEEEcCCCceEEEEEEEeeccccc-------CHHHHHHHHHHHHHHHhCCC---------
Confidence            4477999999999999999999          246888776432       23344678999999999998         


Q ss_pred             CcccccccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc----cCCHHHHHHHHHH
Q psy9184         329 PCFTELLKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK----YRSPNQTYAMILQ  404 (562)
Q Consensus       329 p~fv~l~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~----~l~e~~i~~I~~Q  404 (562)
                                       |||+++++++..              +..+++||++.+|++.+.+.    .+++..++.++.|
T Consensus        77 -----------------~~iv~~~~~~~~--------------~~~~~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~q  125 (327)
T 3poz_A           77 -----------------PHVCRLLGICLT--------------STVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ  125 (327)
T ss_dssp             -----------------TTBCCEEEEEES--------------SSEEEEEECCTTCBHHHHHHHSTTSCCHHHHHHHHHH
T ss_pred             -----------------CCEeEEEEEEec--------------CCeEEEEEecCCCcHHHHHHhcCCCCCHHHHHHHHHH
Confidence                             999999998863              35889999999998887664    3899999999999


Q ss_pred             HHHHHHHHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecCC-------cEEEeec
Q psy9184         405 VVFSLAVAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVGE-------KICYYDL  477 (562)
Q Consensus       405 Il~aL~yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~~-------g~v~~~l  477 (562)
                      |+.||.|||+ .||+||||||+|||++.++                    .+||+|||+|+.....       +...+..
T Consensus       126 i~~~l~~LH~-~~ivH~Dikp~NIll~~~~--------------------~~kl~Dfg~a~~~~~~~~~~~~~~~~~t~~  184 (327)
T 3poz_A          126 IAKGMNYLED-RRLVHRDLAARNVLVKTPQ--------------------HVKITDFGLAKLLGAEEKEYHAEGGKVPIK  184 (327)
T ss_dssp             HHHHHHHHHH-TTCCCSCCCGGGEEEEETT--------------------EEEECCTTHHHHHTTTCC-------CCCGG
T ss_pred             HHHHHHHHhh-CCeeCCCCChheEEECCCC--------------------CEEEccCcceeEccCCcccccccCCCcccc
Confidence            9999999999 7999999999999999886                    7999999999876431       2223457


Q ss_pred             CCCccccCC-CCCcHHHHHHHh
Q psy9184         478 SQDEELFEG-EGDYQFDMYRMM  498 (562)
Q Consensus       478 ~~~pelF~g-~~~~q~dIy~lm  498 (562)
                      |++||.+.+ ..+...|||++.
T Consensus       185 y~aPE~~~~~~~~~~~Di~slG  206 (327)
T 3poz_A          185 WMALESILHRIYTHQSDVWSYG  206 (327)
T ss_dssp             GSCHHHHHHCCCCHHHHHHHHH
T ss_pred             ccChHHhccCCCCchhhhhhhH
Confidence            899998766 456679998853

>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*

Probab=99.93  E-value=3.4e-26  Score=228.01  Aligned_cols=228  Identities=16%  Similarity=0.139  Sum_probs=163.4

Q ss_pred             CCCceeeeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCccccc
Q psy9184         261 SALKNCKKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTEL  334 (562)
Q Consensus       261 ~~y~~~~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~l  334 (562)
                      ++|++.+.||+|+||.||+|      +.||||++....     .........+.+|+.+++.++|               
T Consensus        11 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-----~~~~~~~~~~~~e~~~l~~l~h---------------   70 (276)
T 2h6d_A           11 GHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQK-----IRSLDVVGKIKREIQNLKLFRH---------------   70 (276)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHH-----HHHTTCHHHHHHHHHHHHTCCC---------------
T ss_pred             ccEEEEeeecCCCCeEEEEEEECCCCceEEEEEecccc-----ccchhHHHHHHHHHHHHhcCCC---------------
Confidence            67999999999999999999      789999997542     1122345678899999999998               


Q ss_pred             ccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc---cCCHHHHHHHHHHHHHHHHH
Q psy9184         335 LKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK---YRSPNQTYAMILQVVFSLAV  411 (562)
Q Consensus       335 ~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~---~l~e~~i~~I~~QIl~aL~y  411 (562)
                                 |||+++++++..             .+..|+||||+.+|++.+.+.   .+++.+++.++.||+.||.|
T Consensus        71 -----------~~i~~~~~~~~~-------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~  126 (276)
T 2h6d_A           71 -----------PHIIKLYQVIST-------------PTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQQILSAVDY  126 (276)
T ss_dssp             -----------TTBCCEEEEEEC-------------SSEEEEEEECCCSCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHH
T ss_pred             -----------CCEeEEEEEEec-------------CCeEEEEEeccCCCcHHHHHhccCCCCHHHHHHHHHHHHHHHHH
Confidence                       999999998875             558999999999988776653   48999999999999999999


Q ss_pred             HHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecC----CcEEEeecCCCccccCCC
Q psy9184         412 AEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVG----EKICYYDLSQDEELFEGE  487 (562)
Q Consensus       412 LH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~----~g~v~~~l~~~pelF~g~  487 (562)
                      ||+ .||+||||||+|||++.++                    .++|+|||+++....    ....++..|++||.+.+.
T Consensus       127 lH~-~~i~H~dl~p~Nil~~~~~--------------------~~~l~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~  185 (276)
T 2h6d_A          127 CHR-HMVVHRDLKPENVLLDAHM--------------------NAKIADFGLSNMMSDGEFLRTSCGSPNYAAPEVISGR  185 (276)
T ss_dssp             HHH-HCSSCCCCCGGGEEECTTS--------------------CEEECCCCGGGCCCC-------------CCTGGGTTS
T ss_pred             HHH-CCCccCCCChhhEEECCCC--------------------CEEEeecccccccCCCcceecccCCccccCHHHHcCC
Confidence            999 6999999999999999876                    799999999987654    233457779999999885


Q ss_pred             C--CcHHHHHHHhhcccCCCCCCCCCCChhhhHHHHHHHHhhcccCCCCCCCchhHHHHHHHHHHHhcCCCcCcCC
Q psy9184         488 G--DYQFDMYRMMRKQCQNNWQNFTPKNNVFWIHYLVDKATCLKKGYQYLRAPRHQAFELLEELGQNALHFDSCYE  561 (562)
Q Consensus       488 ~--~~q~dIy~lm~~~~~~~W~~~~P~tn~~wl~yl~~~Ll~~~~~~~~~~~~~~~~~~~l~~l~~~~l~~~s~~~  561 (562)
                      .  ....|||++.-... ..+.+..|+.... ...+...+......++..      .-..+.+|...||+.+...|
T Consensus       186 ~~~~~~~Di~slG~~l~-~l~~g~~p~~~~~-~~~~~~~~~~~~~~~~~~------~~~~l~~li~~~l~~~p~~R  253 (276)
T 2h6d_A          186 LYAGPEVDIWSCGVILY-ALLCGTLPFDDEH-VPTLFKKIRGGVFYIPEY------LNRSVATLLMHMLQVDPLKR  253 (276)
T ss_dssp             CCCHHHHHHHHHHHHHH-HHHHSSCSSCCSS-HHHHHHHHHHCCCCCCTT------SCHHHHHHHHHHTCSSGGGS
T ss_pred             CCCCccchHHHHHHHHH-HHHhCCCCCCCCc-HHHHHHHhhcCcccCchh------cCHHHHHHHHHHccCChhhC
Confidence            4  35699988643332 3333444443222 122223333311111111      12356677888888776654

>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*

Probab=99.93  E-value=3.7e-26  Score=230.74  Aligned_cols=177  Identities=19%  Similarity=0.204  Sum_probs=141.1

Q ss_pred             CCCCceeeeeeccCceEEEEE----------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCC
Q psy9184         260 SSALKNCKKIGEGVYGEVFKL----------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTP  329 (562)
Q Consensus       260 ~~~y~~~~~LG~GsfG~Vyka----------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p  329 (562)
                      ...|++.+.||+|+||.||+|          +.||+|++....       .......+.+|+.+++.++|          
T Consensus        20 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~-------~~~~~~~~~~E~~~l~~l~h----------   82 (302)
T 4e5w_A           20 KRFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPES-------GGNHIADLKKEIEILRNLYH----------   82 (302)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEECTTSSSCSEEEEEEEEC------------CCHHHHHHHHHHHHTCCC----------
T ss_pred             hhhhhhhhccCCCCceEEEEEEEccccCccCeEEEEEEecccc-------cchhHHHHHHHHHHHHhCCC----------
Confidence            356899999999999999998          689999998643       12334678899999999998          


Q ss_pred             cccccccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc----cCCHHHHHHHHHHH
Q psy9184         330 CFTELLKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK----YRSPNQTYAMILQV  405 (562)
Q Consensus       330 ~fv~l~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~----~l~e~~i~~I~~QI  405 (562)
                                      |||+++++++....           ...+|+||||+.+|++.+.+.    .+++.+++.++.||
T Consensus        83 ----------------~~i~~~~~~~~~~~-----------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i  135 (302)
T 4e5w_A           83 ----------------ENIVKYKGICTEDG-----------GNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQI  135 (302)
T ss_dssp             ----------------TTBCCEEEEEEC--------------CCEEEEEECCTTCBHHHHHHHHTTTCCHHHHHHHHHHH
T ss_pred             ----------------CCeeeeeeEEecCC-----------CceEEEEEEeCCCCcHHHHHHhccccCCHHHHHHHHHHH
Confidence                            99999999887522           357899999999998776662    48999999999999


Q ss_pred             HHHHHHHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecCCcE--------EEeec
Q psy9184         406 VFSLAVAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVGEKI--------CYYDL  477 (562)
Q Consensus       406 l~aL~yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~~g~--------v~~~l  477 (562)
                      +.||+|||+ .||+||||||+|||++.++                    .++|+|||+|+.......        ..+..
T Consensus       136 ~~~l~~lH~-~~i~H~dikp~Nil~~~~~--------------------~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~  194 (302)
T 4e5w_A          136 CKGMDYLGS-RQYVHRDLAARNVLVESEH--------------------QVKIGDFGLTKAIETDKEYYTVKDDRDSPVF  194 (302)
T ss_dssp             HHHHHHHHH-TTEECSCCSGGGEEEEETT--------------------EEEECCCTTCEECCTTCCEEECCCCTTCCGG
T ss_pred             HHHHHHhhc-CCcccCCCchheEEEcCCC--------------------CEEECcccccccccCCCcceeccCCCCCCcc
Confidence            999999999 7999999999999999886                    799999999988754321        22344


Q ss_pred             CCCccccCCC-CCcHHHHHHHhhcc
Q psy9184         478 SQDEELFEGE-GDYQFDMYRMMRKQ  501 (562)
Q Consensus       478 ~~~pelF~g~-~~~q~dIy~lm~~~  501 (562)
                      |++||++.+. .....|||++.-..
T Consensus       195 y~aPE~~~~~~~~~~~Di~slG~il  219 (302)
T 4e5w_A          195 WYAPECLMQSKFYIASDVWSFGVTL  219 (302)
T ss_dssp             GCCHHHHHHCEEEHHHHHHHHHHHH
T ss_pred             ccCCeeecCCCCCcchhHHHHHHHH
Confidence            8899987664 45568998864433

>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*

Probab=99.93  E-value=4.2e-26  Score=231.01  Aligned_cols=228  Identities=18%  Similarity=0.276  Sum_probs=166.3

Q ss_pred             CCCCceeeeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCcccc
Q psy9184         260 SSALKNCKKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTE  333 (562)
Q Consensus       260 ~~~y~~~~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~  333 (562)
                      ...|++.+.||+|+||.||+|      +.||||++.....       ....+.+.+|+.+++.+.|              
T Consensus        21 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-------~~~~~~~~~e~~~l~~l~h--------------   79 (303)
T 3a7i_A           21 EELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEA-------EDEIEDIQQEITVLSQCDS--------------   79 (303)
T ss_dssp             GGTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEETTTC-------STTHHHHHHHHHHHHHCCC--------------
T ss_pred             HHHHHHhhhhcccCCeEEEEEEECCCCcEEEEEEeccccc-------HHHHHHHHHHHHHHHhCCC--------------
Confidence            466899999999999999999      7899999986531       2334678899999999988              


Q ss_pred             cccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc--cCCHHHHHHHHHHHHHHHHH
Q psy9184         334 LLKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK--YRSPNQTYAMILQVVFSLAV  411 (562)
Q Consensus       334 l~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~--~l~e~~i~~I~~QIl~aL~y  411 (562)
                                  |||+++++++.+             +..+|+||||+.||++.+.+.  .+++.++..++.||+.||.|
T Consensus        80 ------------~~i~~~~~~~~~-------------~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~qi~~~l~~  134 (303)
T 3a7i_A           80 ------------PYVTKYYGSYLK-------------DTKLWIIMEYLGGGSALDLLEPGPLDETQIATILREILKGLDY  134 (303)
T ss_dssp             ------------TTBCCEEEEEEE-------------TTEEEEEEECCTTEEHHHHHTTSCCCHHHHHHHHHHHHHHHHH
T ss_pred             ------------CCEeEEEEEEec-------------CCeEEEEEEeCCCCcHHHHHhcCCCCHHHHHHHHHHHHHHHHH
Confidence                        999999998875             558999999999887766554  48999999999999999999


Q ss_pred             HHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecCC-----cEEEeecCCCccccCC
Q psy9184         412 AEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVGE-----KICYYDLSQDEELFEG  486 (562)
Q Consensus       412 LH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~~-----g~v~~~l~~~pelF~g  486 (562)
                      ||+ .||+||||||+|||++.++                    .++|+|||+++.....     ...++..|++||++.+
T Consensus       135 lH~-~~i~H~dl~p~Nil~~~~~--------------------~~kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~  193 (303)
T 3a7i_A          135 LHS-EKKIHRDIKAANVLLSEHG--------------------EVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIKQ  193 (303)
T ss_dssp             HHH-TTEECCCCSGGGEEECTTS--------------------CEEECCCTTCEECBTTBCCBCCCCSCGGGCCHHHHTT
T ss_pred             HHH-CCCccCCCChheEEECCCC--------------------CEEEeecccceecCccccccCccCCCcCccCHHHHhc
Confidence            999 7999999999999998876                    7999999999876542     2345677899999876


Q ss_pred             C-CCcHHHHHHHhhcccCCCCCCCCCCChhhhHHHHHHHHhhcccCCCCCCCchhHHHHHHHHHHHhcCCCcCcCC
Q psy9184         487 E-GDYQFDMYRMMRKQCQNNWQNFTPKNNVFWIHYLVDKATCLKKGYQYLRAPRHQAFELLEELGQNALHFDSCYE  561 (562)
Q Consensus       487 ~-~~~q~dIy~lm~~~~~~~W~~~~P~tn~~wl~yl~~~Ll~~~~~~~~~~~~~~~~~~~l~~l~~~~l~~~s~~~  561 (562)
                      . .+...|||++.-... ..+.+..|+........+ ..+.. . ..+.....   .-..+.+|...+|..+...|
T Consensus       194 ~~~~~~~Di~slG~il~-~l~~g~~p~~~~~~~~~~-~~~~~-~-~~~~~~~~---~~~~l~~li~~~l~~dp~~R  262 (303)
T 3a7i_A          194 SAYDSKADIWSLGITAI-ELARGEPPHSELHPMKVL-FLIPK-N-NPPTLEGN---YSKPLKEFVEACLNKEPSFR  262 (303)
T ss_dssp             CCBCTHHHHHHHHHHHH-HHHHSSCTTTTSCHHHHH-HHHHH-S-CCCCCCSS---CCHHHHHHHHHHCCSSGGGS
T ss_pred             CCCCchhhhHHHHHHHH-HHccCCCCCCCcCHHHHH-HHhhc-C-CCCCCccc---cCHHHHHHHHHHcCCChhhC
Confidence            4 456799988643332 233333444322111111 11112 1 11111111   12356677777887766554

>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*

Probab=99.93  E-value=4.9e-26  Score=234.21  Aligned_cols=185  Identities=19%  Similarity=0.234  Sum_probs=144.8

Q ss_pred             CCCceeeeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCccccc
Q psy9184         261 SALKNCKKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTEL  334 (562)
Q Consensus       261 ~~y~~~~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~l  334 (562)
                      ++|++.+.||+|+||.||+|      +.||+|++....      ......+.+.+|+.+++.++|               
T Consensus        25 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~------~~~~~~~~~~~E~~~l~~l~h---------------   83 (331)
T 4aaa_A           25 EKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESD------DDKMVKKIAMREIKLLKQLRH---------------   83 (331)
T ss_dssp             GGEEEEEEGGGGTTSSEEEEEETTTCCEEEEEEEESCS------SCHHHHHHHHHHHHHHHHCCC---------------
T ss_pred             hhheeeeEEeecCCEEEEEEEECCCCceEEEEEEecCC------CchHHHHHHHHHHHHHhhCCC---------------
Confidence            67999999999999999999      689999997653      223344667899999999998               


Q ss_pred             ccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCcccc---ccCCHHHHHHHHHHHHHHHHH
Q psy9184         335 LKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDI---KYRSPNQTYAMILQVVFSLAV  411 (562)
Q Consensus       335 ~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l---~~l~e~~i~~I~~QIl~aL~y  411 (562)
                                 |||+++++++.+             .+..|+||||+.++.+....   ..+++..++.++.||+.||.|
T Consensus        84 -----------~~iv~~~~~~~~-------------~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~  139 (331)
T 4aaa_A           84 -----------ENLVNLLEVCKK-------------KKRWYLVFEFVDHTILDDLELFPNGLDYQVVQKYLFQIINGIGF  139 (331)
T ss_dssp             -----------TTBCCEEEEEEE-------------TTEEEEEEECCSEEHHHHHHHSTTCCCHHHHHHHHHHHHHHHHH
T ss_pred             -----------CCEeeEEEEeec-------------CCEEEEEEecCCcchHHHHHhhccCCCHHHHHHHHHHHHHHHHH
Confidence                       999999999875             55899999999977544332   248999999999999999999


Q ss_pred             HHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecC-----CcEEEeecCCCccccCC
Q psy9184         412 AEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVG-----EKICYYDLSQDEELFEG  486 (562)
Q Consensus       412 LH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~-----~g~v~~~l~~~pelF~g  486 (562)
                      ||+ .||+||||||+|||++.++                    .+||+|||+++....     ....++..|++||++.+
T Consensus       140 LH~-~~ivH~dlkp~Nil~~~~~--------------------~~kl~Dfg~~~~~~~~~~~~~~~~~t~~y~aPE~~~~  198 (331)
T 4aaa_A          140 CHS-HNIIHRDIKPENILVSQSG--------------------VVKLCDFGFARTLAAPGEVYDDEVATRWYRAPELLVG  198 (331)
T ss_dssp             HHH-TTCCCCCCCGGGEEECTTS--------------------CEEECCCTTC------------CCCCCTTCCHHHHTT
T ss_pred             HHH-CCEEccCcChheEEEcCCC--------------------cEEEEeCCCceeecCCccccCCCcCCccccCcccccC
Confidence            999 7999999999999998886                    799999999987543     23345777999999887


Q ss_pred             C--CCcHHHHHHHhhcccCCCCCCCCCC
Q psy9184         487 E--GDYQFDMYRMMRKQCQNNWQNFTPK  512 (562)
Q Consensus       487 ~--~~~q~dIy~lm~~~~~~~W~~~~P~  512 (562)
                      .  .....|||++.-... ..+.+..|+
T Consensus       199 ~~~~~~~~Di~slG~il~-~l~~g~~pf  225 (331)
T 4aaa_A          199 DVKYGKAVDVWAIGCLVT-EMFMGEPLF  225 (331)
T ss_dssp             CTTCCTHHHHHHHHHHHH-HHHHSSCSC
T ss_pred             CCCcchHHHHHHHHHHHH-HHHhCCCCC
Confidence            4  456699988643332 333344444

>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...

Probab=99.93  E-value=2.2e-26  Score=237.10  Aligned_cols=174  Identities=19%  Similarity=0.259  Sum_probs=142.7

Q ss_pred             CCCCCceeeeeeccCceEEEEE-------------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhc-CCccccC
Q psy9184         259 PSSALKNCKKIGEGVYGEVFKL-------------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKET-SDLQYRT  324 (562)
Q Consensus       259 ~~~~y~~~~~LG~GsfG~Vyka-------------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L-~h~~~~~  324 (562)
                      +.++|++.+.||+|+||.||+|             ..||+|++....       .......+.+|+.+++.+ +|     
T Consensus        33 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~~-------~~~~~~~~~~E~~~l~~l~~h-----  100 (334)
T 2pvf_A           33 PRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDA-------TEKDLSDLVSEMEMMKMIGKH-----  100 (334)
T ss_dssp             CGGGEEEEEEEEECSSCEEEEEEETTCSTTCC---CEEEEEECCTTC-------CHHHHHHHHHHHHHHHHHCCC-----
T ss_pred             CHhHeEEeeEEeecCceeEEEeEeccccccccccceEEEEeeeccCC-------cHHHHHHHHHHHHHHHHhhcC-----
Confidence            4578999999999999999999             259999998543       244567889999999999 55     


Q ss_pred             CCCCCcccccccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc-------------
Q psy9184         325 ENSTPCFTELLKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK-------------  391 (562)
Q Consensus       325 ~n~~p~fv~l~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~-------------  391 (562)
                                           |||+++++++..             ++.+|+||||+.+|++.+.+.             
T Consensus       101 ---------------------p~iv~~~~~~~~-------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~  146 (334)
T 2pvf_A          101 ---------------------KNIINLLGACTQ-------------DGPLYVIVEYASKGNLREYLRARRPPGMEYSYDI  146 (334)
T ss_dssp             ---------------------TTBCCEEEEECS-------------SSCCEEEEECCTTCBHHHHHHTTSCTTCCSCC--
T ss_pred             ---------------------CCEeeEEEEEcc-------------CCceEEEEECCCCCcHHHHHHHhccccccccccc
Confidence                                 999999998865             457899999999998766553             


Q ss_pred             ------cCCHHHHHHHHHHHHHHHHHHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEecccee
Q psy9184         392 ------YRSPNQTYAMILQVVFSLAVAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISR  465 (562)
Q Consensus       392 ------~l~e~~i~~I~~QIl~aL~yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr  465 (562)
                            .+++.+++.++.||+.||.|||+ .||+||||||+|||++.++                    .+||+|||+++
T Consensus       147 ~~~~~~~~~~~~~~~i~~qi~~aL~~LH~-~~ivH~Dlkp~NIll~~~~--------------------~~kL~Dfg~~~  205 (334)
T 2pvf_A          147 NRVPEEQMTFKDLVSCTYQLARGMEYLAS-QKCIHRDLAARNVLVTENN--------------------VMKIADFGLAR  205 (334)
T ss_dssp             ------CCCHHHHHHHHHHHHHHHHHHHH-TTEECSCCSGGGEEECTTC--------------------CEEECCCTTCE
T ss_pred             cccccccCCHHHHHHHHHHHHHHHHHHHh-CCeeCCCCccceEEEcCCC--------------------CEEEccccccc
Confidence                  27889999999999999999999 7999999999999998876                    79999999998


Q ss_pred             eecCCc-------EEEeecCCCccccCC-CCCcHHHHHHHhh
Q psy9184         466 CFVGEK-------ICYYDLSQDEELFEG-EGDYQFDMYRMMR  499 (562)
Q Consensus       466 ~~~~~g-------~v~~~l~~~pelF~g-~~~~q~dIy~lm~  499 (562)
                      ......       ...+..|++||++.+ ......|||++.-
T Consensus       206 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~  247 (334)
T 2pvf_A          206 DINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGV  247 (334)
T ss_dssp             ECTTTSSEECCSCCCCCGGGCCHHHHHHCEECHHHHHHHHHH
T ss_pred             cccccccccccCCCCcccceeChHHhcCCCcChHHHHHHHHH
Confidence            765422       223456889998765 3456689988643

>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*

Probab=99.93  E-value=2.1e-26  Score=235.63  Aligned_cols=175  Identities=15%  Similarity=0.137  Sum_probs=142.4

Q ss_pred             CCCCCceeeeeeccCceEEEEE-----eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCcccc
Q psy9184         259 PSSALKNCKKIGEGVYGEVFKL-----NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTE  333 (562)
Q Consensus       259 ~~~~y~~~~~LG~GsfG~Vyka-----~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~  333 (562)
                      ..++|++.+.||+|+||.||+|     +.||||++.....       ......+.+|+.+++.++|              
T Consensus        28 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~-------~~~~~~~~~e~~~l~~l~h--------------   86 (326)
T 3uim_A           28 ASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERT-------QGGELQFQTEVEMISMAVH--------------   86 (326)
T ss_dssp             TTTSSCSTTEEECCSSSEEEEECCSSSCCEEEEECCC------------CCCHHHHHHHGGGTCCC--------------
T ss_pred             HhhccccceeEecCCCcEEEEEEecCCCEEEEEEeccccC-------chHHHHHHHHHHHHHhccC--------------
Confidence            4578999999999999999999     7899999986531       1111357899999999998              


Q ss_pred             cccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc-------cCCHHHHHHHHHHHH
Q psy9184         334 LLKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK-------YRSPNQTYAMILQVV  406 (562)
Q Consensus       334 l~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~-------~l~e~~i~~I~~QIl  406 (562)
                                  |||+++++++.+             ++..|+||||+.+|++.+.+.       .+++..+..++.||+
T Consensus        87 ------------~~iv~~~~~~~~-------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~  141 (326)
T 3uim_A           87 ------------RNLLRLRGFCMT-------------PTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSA  141 (326)
T ss_dssp             ------------TTBCCCCEEECC-------------SSCCEEEEECCTTCBHHHHHHCCSTTCCCCCHHHHHHHHHHHH
T ss_pred             ------------CCccceEEEEec-------------CCceEEEEEeccCCCHHHHHHhccccCCCCCHHHHHHHHHHHH
Confidence                        999999998875             457899999999998866553       288999999999999


Q ss_pred             HHHHHHHhhC---CeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecCC------cEEEeec
Q psy9184         407 FSLAVAEVEL---EFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVGE------KICYYDL  477 (562)
Q Consensus       407 ~aL~yLH~~~---~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~~------g~v~~~l  477 (562)
                      .||.|||+ .   ||+||||||+|||++.++                    .+||+|||+|+.....      ...++..
T Consensus       142 ~~l~~lH~-~~~~~ivH~Dlkp~Nil~~~~~--------------------~~kl~Dfg~~~~~~~~~~~~~~~~~gt~~  200 (326)
T 3uim_A          142 RGLAYLHD-HCDPKIIHRDVKAANILLDEEF--------------------EAVVGDFGLAKLMDYKDTHVTTAVRGTIG  200 (326)
T ss_dssp             HHHHHHHH-SSSSCEECCCCSGGGEEECTTC--------------------CEEECCCSSCEECCSSSSCEECCCCSCGG
T ss_pred             HHHHHHHh-CCCCCeEeCCCchhhEEECCCC--------------------CEEeccCccccccCcccccccccccCCcC
Confidence            99999999 7   999999999999999886                    7999999999876531      2235677


Q ss_pred             CCCccccCC-CCCcHHHHHHHhhc
Q psy9184         478 SQDEELFEG-EGDYQFDMYRMMRK  500 (562)
Q Consensus       478 ~~~pelF~g-~~~~q~dIy~lm~~  500 (562)
                      |++||++.+ ..+...|||++.-.
T Consensus       201 y~aPE~~~~~~~~~~~Di~slG~i  224 (326)
T 3uim_A          201 HIAPEYLSTGKSSEKTDVFGYGVM  224 (326)
T ss_dssp             GCCHHHHHHSEECHHHHHHHHHHH
T ss_pred             ccCHHHhccCCCCccccchhHHHH
Confidence            899998865 45566899886443

>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7

Probab=99.93  E-value=5.4e-26  Score=228.74  Aligned_cols=225  Identities=15%  Similarity=0.127  Sum_probs=165.3

Q ss_pred             CCceeeeeeccCceEEEEE---------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCccc
Q psy9184         262 ALKNCKKIGEGVYGEVFKL---------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFT  332 (562)
Q Consensus       262 ~y~~~~~LG~GsfG~Vyka---------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv  332 (562)
                      .|...++||+|+||.||+|         ..||+|++....       .....+.+.+|+.+++.++|             
T Consensus        22 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~-------~~~~~~~~~~E~~~l~~l~h-------------   81 (298)
T 3pls_A           22 VTHSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRIT-------EMQQVEAFLREGLLMRGLNH-------------   81 (298)
T ss_dssp             EEEEEEEEEEETTEEEEEEEEECSSSCEEEEEEEEETTCC-------SHHHHHHHHHHHHHHHTCCC-------------
T ss_pred             EEccCceeccCCCceEEEEEEecCCCceeeeeeeeccccc-------cHHHHHHHHHHHHHHHhCCC-------------
Confidence            4567799999999999999         279999987542       24455788999999999998             


Q ss_pred             ccccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc----cCCHHHHHHHHHHHHHH
Q psy9184         333 ELLKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK----YRSPNQTYAMILQVVFS  408 (562)
Q Consensus       333 ~l~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~----~l~e~~i~~I~~QIl~a  408 (562)
                                   |||+++++++.+.            +...|+||||+.+|++.+.+.    .+++.+++.++.||+.|
T Consensus        82 -------------~~iv~~~~~~~~~------------~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~  136 (298)
T 3pls_A           82 -------------PNVLALIGIMLPP------------EGLPHVLLPYMCHGDLLQFIRSPQRNPTVKDLISFGLQVARG  136 (298)
T ss_dssp             -------------TTBCCCCEEECCS------------SSCCEEEECCCTTCBHHHHHHCTTCCCBHHHHHHHHHHHHHH
T ss_pred             -------------CCeeeEEEEEecC------------CCCcEEEEecccCCCHHHHHhccccCCCHHHHHHHHHHHHHH
Confidence                         9999999988651            334589999999998877664    37899999999999999


Q ss_pred             HHHHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecC---------CcEEEeecCC
Q psy9184         409 LAVAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVG---------EKICYYDLSQ  479 (562)
Q Consensus       409 L~yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~---------~g~v~~~l~~  479 (562)
                      |.|||+ .||+||||||+|||++.++                    .+||+|||+|+....         .....+..|.
T Consensus       137 l~~LH~-~~i~H~dikp~Nili~~~~--------------------~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~y~  195 (298)
T 3pls_A          137 MEYLAE-QKFVHRDLAARNCMLDESF--------------------TVKVADFGLARDILDREYYSVQQHRHARLPVKWT  195 (298)
T ss_dssp             HHHHHH-TTCCCSCCSGGGEEECTTC--------------------CEEECCTTSSCTTTTGGGGCSCCSSCTTCGGGGS
T ss_pred             HHHHHh-CCcccCCCCcceEEEcCCC--------------------cEEeCcCCCcccccCCcccccccCcCCCCCcccc
Confidence            999999 7999999999999998876                    799999999975433         1223356788


Q ss_pred             CccccCCC-CCcHHHHHHHhhccc------CCCCCCCC----------------CCChhhhHHHHHHHHhhcccCCCCCC
Q psy9184         480 DEELFEGE-GDYQFDMYRMMRKQC------QNNWQNFT----------------PKNNVFWIHYLVDKATCLKKGYQYLR  536 (562)
Q Consensus       480 ~pelF~g~-~~~q~dIy~lm~~~~------~~~W~~~~----------------P~tn~~wl~yl~~~Ll~~~~~~~~~~  536 (562)
                      +||.+.+. .+...|||++.-...      ...|....                |..-...+..++..|+.   .-+..|
T Consensus       196 aPE~~~~~~~~~~~Di~slG~il~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~---~~p~~R  272 (298)
T 3pls_A          196 ALESLQTYRFTTKSDVWSFGVLLWELLTRGAPPYRHIDPFDLTHFLAQGRRLPQPEYCPDSLYQVMQQCWE---ADPAVR  272 (298)
T ss_dssp             CHHHHTTCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCGGGHHHHHHTTCCCCCCTTCCHHHHHHHHHHTC---SSGGGS
T ss_pred             ChhhhccCCCChhhchhhHHHHHHHHhhCCCCCCccCCHHHHHHHhhcCCCCCCCccchHHHHHHHHHHcc---CChhhC
Confidence            99988774 466799988643322      11111111                11111235566667776   334445


Q ss_pred             CchhHHHHHHHHHHHhcCC
Q psy9184         537 APRHQAFELLEELGQNALH  555 (562)
Q Consensus       537 ~~~~~~~~~l~~l~~~~l~  555 (562)
                      ....+.++.|+++...++.
T Consensus       273 ps~~~ll~~l~~~~~~l~~  291 (298)
T 3pls_A          273 PTFRVLVGEVEQIVSALLG  291 (298)
T ss_dssp             CCHHHHHHHHHHHHHHCCS
T ss_pred             cCHHHHHHHHHHHHHHHhc
Confidence            5556668888877777653

>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*

Probab=99.93  E-value=9.8e-26  Score=229.04  Aligned_cols=175  Identities=20%  Similarity=0.314  Sum_probs=136.4

Q ss_pred             CCCceeeeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCccccc
Q psy9184         261 SALKNCKKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTEL  334 (562)
Q Consensus       261 ~~y~~~~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~l  334 (562)
                      ++|++.+.||+|+||.||+|      ..||||++....     .........+.+|+.+++.++|               
T Consensus        32 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~-----~~~~~~~~~~~~E~~~l~~l~h---------------   91 (310)
T 2wqm_A           32 ANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFD-----LMDAKARADCIKEIDLLKQLNH---------------   91 (310)
T ss_dssp             GGEEEEEEEECC--CEEEEEEETTTCCEEEEEEECTTS-----SCCHHHHHHHHHHHHHHHTCCC---------------
T ss_pred             cceEEEEeecCCCCceEEEEEEcCCCceEEEEeeehhh-----ccCHHHHHHHHHHHHHHHhCCC---------------
Confidence            57999999999999999999      789999998643     2234556788999999999998               


Q ss_pred             ccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc-------cCCHHHHHHHHHHHHH
Q psy9184         335 LKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK-------YRSPNQTYAMILQVVF  407 (562)
Q Consensus       335 ~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~-------~l~e~~i~~I~~QIl~  407 (562)
                                 |||+++++++..             ++..|+||||+.+|++.+.+.       .+++..++.++.||+.
T Consensus        92 -----------~~i~~~~~~~~~-------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~  147 (310)
T 2wqm_A           92 -----------PNVIKYYASFIE-------------DNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCS  147 (310)
T ss_dssp             -----------TTBCCEEEEEEE-------------TTEEEEEEECCCSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHH
T ss_pred             -----------CCEeeEEEEEEc-------------CCcEEEEEecCCCCCHHHHHHHhcccccCCCHHHHHHHHHHHHH
Confidence                       999999998875             558999999999998766553       2889999999999999


Q ss_pred             HHHHHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecCC-----cEEEeecCCCcc
Q psy9184         408 SLAVAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVGE-----KICYYDLSQDEE  482 (562)
Q Consensus       408 aL~yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~~-----g~v~~~l~~~pe  482 (562)
                      ||.|||+ .||+||||||+|||++.++                    .++|+|||+++.....     ...++..|++||
T Consensus       148 ~l~~LH~-~~i~H~dl~p~NIl~~~~~--------------------~~kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE  206 (310)
T 2wqm_A          148 ALEHMHS-RRVMHRDIKPANVFITATG--------------------VVKLGDLGLGRFFSSKTTAAHSLVGTPYYMSPE  206 (310)
T ss_dssp             HHHHHHH-TTCCCCCCCGGGEEECTTS--------------------CEEECCC------------------CCSSCCHH
T ss_pred             HHHHHhh-CCeeCCCCcHHHEEEcCCC--------------------CEEEEeccceeeecCCCccccccCCCeeEeChH
Confidence            9999999 7999999999999999876                    7999999999876542     234577899999


Q ss_pred             ccCCC-CCcHHHHHHHhhc
Q psy9184         483 LFEGE-GDYQFDMYRMMRK  500 (562)
Q Consensus       483 lF~g~-~~~q~dIy~lm~~  500 (562)
                      ++.+. .....|||++...
T Consensus       207 ~~~~~~~~~~~Dv~slG~i  225 (310)
T 2wqm_A          207 RIHENGYNFKSDIWSLGCL  225 (310)
T ss_dssp             HHTTCCCCHHHHHHHHHHH
T ss_pred             HhCCCCCCchhhHHHHHHH
Confidence            88763 5566999886433

>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...

Probab=99.93  E-value=2.7e-26  Score=230.12  Aligned_cols=171  Identities=25%  Similarity=0.279  Sum_probs=144.0

Q ss_pred             CCCCCceeeeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCccc
Q psy9184         259 PSSALKNCKKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFT  332 (562)
Q Consensus       259 ~~~~y~~~~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv  332 (562)
                      ...+|++.+.||+|+||.||+|      ..||+|++....         ...+.+.+|+.+++.++|             
T Consensus        11 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~---------~~~~~~~~E~~~l~~l~h-------------   68 (288)
T 3kfa_A           11 ERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT---------MEVEEFLKEAAVMKEIKH-------------   68 (288)
T ss_dssp             CGGGEEEEEESGGGTTCSEEEEEEGGGTEEEEEEEECSCS---------THHHHHHHHHHHHHHCCC-------------
T ss_pred             cccceeEEeecCCCCceeEEEeEecCCCEEEEEEecCcCH---------HHHHHHHHHHHHHHhCCC-------------
Confidence            3467999999999999999999      689999997542         234678899999999998             


Q ss_pred             ccccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc-----cCCHHHHHHHHHHHHH
Q psy9184         333 ELLKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK-----YRSPNQTYAMILQVVF  407 (562)
Q Consensus       333 ~l~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~-----~l~e~~i~~I~~QIl~  407 (562)
                                   |||+++++++.+             ++..|+||||+.||++.+.+.     .+++..++.++.||+.
T Consensus        69 -------------~~i~~~~~~~~~-------------~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~  122 (288)
T 3kfa_A           69 -------------PNLVQLLGVCTR-------------EPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISS  122 (288)
T ss_dssp             -------------TTBCCEEEEECS-------------SSSEEEEEECCTTEEHHHHHHHCCTTTSCHHHHHHHHHHHHH
T ss_pred             -------------CCEeeEEEEEcc-------------CCCEEEEEEcCCCCcHHHHHHhcccCCccHhHHHHHHHHHHH
Confidence                         999999998875             557999999999998877663     2889999999999999


Q ss_pred             HHHHHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecC------CcEEEeecCCCc
Q psy9184         408 SLAVAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVG------EKICYYDLSQDE  481 (562)
Q Consensus       408 aL~yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~------~g~v~~~l~~~p  481 (562)
                      ||.|||+ .||+||||||+|||++.++                    .++|+|||+|+....      .+..++..|++|
T Consensus       123 ~l~~lH~-~~i~H~dikp~Nil~~~~~--------------------~~~l~Dfg~~~~~~~~~~~~~~~~~~~~~y~aP  181 (288)
T 3kfa_A          123 AMEYLEK-KNFIHRDLAARNCLVGENH--------------------LVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAP  181 (288)
T ss_dssp             HHHHHHH-HTCCCSCCSGGGEEECGGG--------------------CEEECCCCGGGTSCSSSSEEETTEEECGGGCCH
T ss_pred             HHHHHHH-CCccCCCCCcceEEEcCCC--------------------CEEEccCccceeccCCccccccCCccccCcCCh
Confidence            9999999 6999999999999998876                    799999999986553      334456678999


Q ss_pred             cccCC-CCCcHHHHHHHh
Q psy9184         482 ELFEG-EGDYQFDMYRMM  498 (562)
Q Consensus       482 elF~g-~~~~q~dIy~lm  498 (562)
                      |++.+ ..+...|||++.
T Consensus       182 E~~~~~~~~~~~Di~slG  199 (288)
T 3kfa_A          182 ESLAYNKFSIKSDVWAFG  199 (288)
T ss_dssp             HHHHHCCCCHHHHHHHHH
T ss_pred             hhhccCCCCchhhHHHHH
Confidence            98875 456668998853

>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*

Probab=99.93  E-value=1e-25  Score=241.66  Aligned_cols=190  Identities=19%  Similarity=0.191  Sum_probs=148.9

Q ss_pred             CCCCceeeeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCcccc
Q psy9184         260 SSALKNCKKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTE  333 (562)
Q Consensus       260 ~~~y~~~~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~  333 (562)
                      ..+|++.+.||+|+||.||+|      +.||||++...         ......+.+|+.+++.+.|...           
T Consensus        96 ~~ry~~~~~LG~G~fg~V~~a~~~~~~~~vAvK~~~~~---------~~~~~~~~~E~~~l~~l~~~~~-----------  155 (429)
T 3kvw_A           96 AYRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNE---------KRFHRQAAEEIRILEHLRKQDK-----------  155 (429)
T ss_dssp             TTTEEEEEEEEESSSEEEEEEEETTTTEEEEEEEECSC---------HHHHHHHHHHHHHHHHHHTTCT-----------
T ss_pred             cCcEEEEEEcccCccEEEEEEEECCCCcEEEEEEECCc---------cchHHHHHHHHHHHHHHhhccc-----------
Confidence            367999999999999999999      78999999753         2334567889999999877321           


Q ss_pred             cccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc-----cCCHHHHHHHHHHHHHH
Q psy9184         334 LLKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK-----YRSPNQTYAMILQVVFS  408 (562)
Q Consensus       334 l~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~-----~l~e~~i~~I~~QIl~a  408 (562)
                               ..|+||+++++.|..             .+.+|+||||+. |++.+.+.     .+++..++.++.||+.|
T Consensus       156 ---------~~~~~iv~~~~~~~~-------------~~~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~i~~qi~~a  212 (429)
T 3kvw_A          156 ---------DNTMNVIHMLENFTF-------------RNHICMTFELLS-MNLYELIKKNKFQGFSLPLVRKFAHSILQC  212 (429)
T ss_dssp             ---------TSCSCBCCEEEEEEE-------------TTEEEEEECCCC-CBHHHHHHHTTTCCCCHHHHHHHHHHHHHH
T ss_pred             ---------cCCcCEEEEEeeccc-------------CCeEEEEEeccC-CCHHHHHHhccCCCCCHHHHHHHHHHHHHH
Confidence                     125899999998875             458999999996 55665553     28999999999999999


Q ss_pred             HHHHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecC--CcEEEeecCCCccccCC
Q psy9184         409 LAVAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVG--EKICYYDLSQDEELFEG  486 (562)
Q Consensus       409 L~yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~--~g~v~~~l~~~pelF~g  486 (562)
                      |.|||+ .+|+||||||+|||++.++.                  ..+||+|||+|+....  ...+.+..|++||++.+
T Consensus       213 L~~LH~-~~ivHrDlKp~NILl~~~~~------------------~~vkL~DFG~a~~~~~~~~~~~gt~~y~aPE~~~~  273 (429)
T 3kvw_A          213 LDALHK-NRIIHCDLKPENILLKQQGR------------------SGIKVIDFGSSCYEHQRVYTYIQSRFYRAPEVILG  273 (429)
T ss_dssp             HHHHHH-HTEECSCCSGGGEEESSTTS------------------CCEEECCCTTCEETTCCCCSSCSCGGGCCHHHHHT
T ss_pred             HHHHHH-CCeecCCCCHHHeEEccCCC------------------cceEEeecccceecCCcccccCCCCCccChHHHhC
Confidence            999999 69999999999999998862                  1499999999987654  23455778999998877


Q ss_pred             -CCCcHHHHHHHhhcccCCCCCCCCCC
Q psy9184         487 -EGDYQFDMYRMMRKQCQNNWQNFTPK  512 (562)
Q Consensus       487 -~~~~q~dIy~lm~~~~~~~W~~~~P~  512 (562)
                       ..+...|||++.-... ..+.+..|+
T Consensus       274 ~~~~~~~DiwSlG~il~-elltG~~pf  299 (429)
T 3kvw_A          274 ARYGMPIDMWSLGCILA-ELLTGYPLL  299 (429)
T ss_dssp             BCCCTHHHHHHHHHHHH-HHHHSSCSS
T ss_pred             CCCCchHHHHhHHHHHH-HHHhCCCCC
Confidence             4677799988643332 333344444

>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A

Probab=99.93  E-value=5.1e-27  Score=246.59  Aligned_cols=188  Identities=13%  Similarity=0.072  Sum_probs=134.5

Q ss_pred             CCCCceeeeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCcccc
Q psy9184         260 SSALKNCKKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTE  333 (562)
Q Consensus       260 ~~~y~~~~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~  333 (562)
                      .++|++.+.||+|+||.||+|      +.||||++....     .......+.+.+|+.+++.+..++            
T Consensus        72 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~-----~~~~~~~~~~~~E~~~l~~l~~l~------------  134 (377)
T 3byv_A           72 PRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTE-----RPPSNAIKQMKEEVLRLRLLRGIK------------  134 (377)
T ss_dssp             CEEEEEEEEEEEETTEEEEEEEC-CCCCEEEEEEEEECC------CCTTHHHHHHHHHHGGGGSTTCC------------
T ss_pred             CceEEEcceeecCCCEEEEEEEECCCCcEEEEEEEeecc-----ccchHHHHHHHHHHHHHHhccccC------------
Confidence            467999999999999999999      799999998653     112334567889996666554321            


Q ss_pred             cccccccCCCCCCCceeehhhhh-------ccccCCCCCCCCCCCC-----eEEEEEEecCCCCCccccc---cCCH---
Q psy9184         334 LLKCSCVRGRYPDRLVTLWEEFA-------KTKKSYNDHPSMFEED-----QIFIILELKNGGNDSGDIK---YRSP---  395 (562)
Q Consensus       334 l~~~~iv~g~~~pnIv~l~~~f~-------~~~~s~~~~p~~~~~~-----~l~LVmE~~~gG~ll~~l~---~l~e---  395 (562)
                                 ||||+++++.|.       +.+... .......++     ..|+||||+ +|++.+.+.   .+++   
T Consensus       135 -----------hpniv~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~i~~~~lv~E~~-~g~L~~~l~~~~~~~~~~~  201 (377)
T 3byv_A          135 -----------NQKQAKVHLRFIFPFDLVKDPQKKK-MIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHK  201 (377)
T ss_dssp             -----------SHHHHHHHHCBCCCSEEEECTTSCS-EEEC------CEEESEEEEEECC-SEEHHHHHHHHHHTTTTTH
T ss_pred             -----------CHHHHHHHhhhhhhhhhhhccCCcc-ccccccCCCceEEEEEEEEEecc-CCCHHHHHHhccccccccc
Confidence                       378877774332       210000 000000011     379999999 577766654   2444   


Q ss_pred             ----HHHHHHHHHHHHHHHHHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecC--
Q psy9184         396 ----NQTYAMILQVVFSLAVAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVG--  469 (562)
Q Consensus       396 ----~~i~~I~~QIl~aL~yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~--  469 (562)
                          ..++.|+.||+.||+|||+ .||+||||||+|||++.++                    .+||+|||+|+....  
T Consensus       202 ~l~~~~~~~i~~qi~~aL~~LH~-~~ivHrDikp~NIll~~~~--------------------~~kL~DFG~a~~~~~~~  260 (377)
T 3byv_A          202 SLVHHARLQLTLQVIRLLASLHH-YGLVHTYLRPVDIVLDQRG--------------------GVFLTGFEHLVRDGARV  260 (377)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHH-TTEECSCCCGGGEEECTTC--------------------CEEECCGGGCEETTCEE
T ss_pred             cccHHHHHHHHHHHHHHHHHHHh-CCeecCCCCHHHEEEcCCC--------------------CEEEEechhheecCCcc
Confidence                7888899999999999999 7999999999999999886                    799999999997543  


Q ss_pred             CcEEEeecCCCccccCCC------------CCcHHHHHHHhh
Q psy9184         470 EKICYYDLSQDEELFEGE------------GDYQFDMYRMMR  499 (562)
Q Consensus       470 ~g~v~~~l~~~pelF~g~------------~~~q~dIy~lm~  499 (562)
                      ....+ ..|++||++.+.            .+...|||++.-
T Consensus       261 ~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DvwSlG~  301 (377)
T 3byv_A          261 VSSVS-RGFEPPELEARRATISYHRDRRTLMTFSFDAWALGL  301 (377)
T ss_dssp             ECCCC-TTCCCHHHHHHHTSTHHHHCCEEECCHHHHHHHHHH
T ss_pred             cCCCC-cCccChhhhcccccccccccccccCChhhhHHHHHH
Confidence            22334 789999998765            566799988643

>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}

Probab=99.93  E-value=2.4e-26  Score=237.12  Aligned_cols=173  Identities=20%  Similarity=0.184  Sum_probs=136.2

Q ss_pred             CCCCCCceeeeeeccCceEEEEE------e----eEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCC
Q psy9184         258 YPSSALKNCKKIGEGVYGEVFKL------N----NSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENS  327 (562)
Q Consensus       258 ~~~~~y~~~~~LG~GsfG~Vyka------~----~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~  327 (562)
                      +...+|++.++||+|+||.||+|      +    .||+|.+....       .......+.+|+.+++.++|        
T Consensus        12 l~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~iK~~~~~~-------~~~~~~~~~~E~~~l~~l~h--------   76 (327)
T 3lzb_A           12 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREAT-------SPKANKEILDEAYVMASVDN--------   76 (327)
T ss_dssp             CCTTTEEEEEEEEECSSEEEEEEEECCTTCSCCEEEEEEEECCCS-------SCCCHHHHHHHHHHHTTCCB--------
T ss_pred             cCHhHceEEEEeeeCCCeEEEEEEEcCCCceEEEEEEEEeecccc-------CHHHHHHHHHHHHHHHhCCC--------
Confidence            45588999999999999999999      2    35777775432       12334678899999999998        


Q ss_pred             CCcccccccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc----cCCHHHHHHHHH
Q psy9184         328 TPCFTELLKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK----YRSPNQTYAMIL  403 (562)
Q Consensus       328 ~p~fv~l~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~----~l~e~~i~~I~~  403 (562)
                                        |||+++++++..              +..+++||++.+|++.+.+.    .+++..++.++.
T Consensus        77 ------------------p~iv~~~~~~~~--------------~~~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~i~~  124 (327)
T 3lzb_A           77 ------------------PHVCRLLGICLT--------------STVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCV  124 (327)
T ss_dssp             ------------------TTBCCCCEEEES--------------SSEEEEECCCSSCBHHHHHHHTTTCCCHHHHHHHHH
T ss_pred             ------------------CCeeEEEEEEec--------------CCceEEEEecCCCcHHHHHHhcCCCCCHHHHHHHHH
Confidence                              999999998863              35889999999998887664    388999999999


Q ss_pred             HHHHHHHHHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecCC-------cEEEee
Q psy9184         404 QVVFSLAVAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVGE-------KICYYD  476 (562)
Q Consensus       404 QIl~aL~yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~~-------g~v~~~  476 (562)
                      ||+.||.|||+ .||+||||||+|||++.++                    .+||+|||+|+.....       +...+.
T Consensus       125 qi~~aL~~LH~-~~ivH~Dikp~NIl~~~~~--------------------~~kL~DfG~a~~~~~~~~~~~~~~~~~t~  183 (327)
T 3lzb_A          125 QIAKGMNYLED-RRLVHRDLAARNVLVKTPQ--------------------HVKITDFGLAKLLGAEEKEYHAEGGKVPI  183 (327)
T ss_dssp             HHHHHHHHHHH-TTCCCSCCCGGGEEEEETT--------------------EEEECCTTC----------------CCCG
T ss_pred             HHHHHHHHHhh-CCCcCCCCCHHHEEEcCCC--------------------CEEEccCcceeEccCccccccccCCCccc
Confidence            99999999999 7999999999999998886                    7999999999876431       222244


Q ss_pred             cCCCccccCC-CCCcHHHHHHHh
Q psy9184         477 LSQDEELFEG-EGDYQFDMYRMM  498 (562)
Q Consensus       477 l~~~pelF~g-~~~~q~dIy~lm  498 (562)
                      .|++||.+.+ ..+...|||++.
T Consensus       184 ~y~aPE~~~~~~~~~~~Di~slG  206 (327)
T 3lzb_A          184 KWMALESILHRIYTHQSDVWSYG  206 (327)
T ss_dssp             GGSCHHHHHHCCCCHHHHHHHHH
T ss_pred             cccCHHHHcCCCCChHHHHHHHH
Confidence            6899998776 456679998853

>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...

Probab=99.93  E-value=3.5e-26  Score=233.29  Aligned_cols=172  Identities=20%  Similarity=0.224  Sum_probs=142.7

Q ss_pred             CCCCceeeeeeccCceEEEEE-----------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCC
Q psy9184         260 SSALKNCKKIGEGVYGEVFKL-----------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENST  328 (562)
Q Consensus       260 ~~~y~~~~~LG~GsfG~Vyka-----------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~  328 (562)
                      .++|++.+.||+|+||.||+|           ..||+|++....       .......+.+|+.+++.++|         
T Consensus        24 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~~-------~~~~~~~~~~E~~~l~~l~h---------   87 (322)
T 1p4o_A           24 REKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAA-------SMRERIEFLNEASVMKEFNC---------   87 (322)
T ss_dssp             GGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTS-------CHHHHHHHHHHHHHGGGCCC---------
T ss_pred             hhheeeeeEeccCCceEEEeeeecCccCCCCceEEEEEeccccc-------CHHHHHHHHHHHHHHHhcCC---------
Confidence            467999999999999999998           469999987542       23444678899999999998         


Q ss_pred             CcccccccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc-------------cCCH
Q psy9184         329 PCFTELLKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK-------------YRSP  395 (562)
Q Consensus       329 p~fv~l~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~-------------~l~e  395 (562)
                                       |||+++++++.+             .+..|+||||+.||++.+.+.             .+++
T Consensus        88 -----------------~~i~~~~~~~~~-------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~  137 (322)
T 1p4o_A           88 -----------------HHVVRLLGVVSQ-------------GQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSL  137 (322)
T ss_dssp             -----------------TTBCCEEEEECS-------------SSSCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCH
T ss_pred             -----------------CCEeeeEEEEcc-------------CCccEEEEEeCCCCcHHHHHHHhchhhccCCCCCCcCH
Confidence                             999999998865             457899999999998876653             2588


Q ss_pred             HHHHHHHHHHHHHHHHHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecC------
Q psy9184         396 NQTYAMILQVVFSLAVAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVG------  469 (562)
Q Consensus       396 ~~i~~I~~QIl~aL~yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~------  469 (562)
                      ..++.++.||+.||.|||+ .||+||||||+|||++.++                    .+||+|||+++....      
T Consensus       138 ~~~~~i~~qi~~~l~~lH~-~~i~H~dikp~NIli~~~~--------------------~~kl~Dfg~~~~~~~~~~~~~  196 (322)
T 1p4o_A          138 SKMIQMAGEIADGMAYLNA-NKFVHRDLAARNCMVAEDF--------------------TVKIGDFGMTRDIYETDYYRK  196 (322)
T ss_dssp             HHHHHHHHHHHHHHHHHHH-TTCBCSCCSGGGEEECTTC--------------------CEEECCTTCCCGGGGGGCEEG
T ss_pred             HHHHHHHHHHHHHHHHHHH-CCCccCCCccceEEEcCCC--------------------eEEECcCcccccccccccccc
Confidence            9999999999999999999 7999999999999999876                    799999999986543      


Q ss_pred             -CcEEEeecCCCccccCC-CCCcHHHHHHHh
Q psy9184         470 -EKICYYDLSQDEELFEG-EGDYQFDMYRMM  498 (562)
Q Consensus       470 -~g~v~~~l~~~pelF~g-~~~~q~dIy~lm  498 (562)
                       ....++..|++||++.+ ......|||++.
T Consensus       197 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG  227 (322)
T 1p4o_A          197 GGKGLLPVRWMSPESLKDGVFTTYSDVWSFG  227 (322)
T ss_dssp             GGSSEECGGGCCHHHHHHCCCCHHHHHHHHH
T ss_pred             ccCCCCCCCccChhhhccCCCCchhhHHHHH
Confidence             22345667999998876 456669998863

>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...

Probab=99.93  E-value=4.3e-26  Score=228.13  Aligned_cols=239  Identities=17%  Similarity=0.170  Sum_probs=165.9

Q ss_pred             CCCceeeeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCccccc
Q psy9184         261 SALKNCKKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTEL  334 (562)
Q Consensus       261 ~~y~~~~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~l  334 (562)
                      ++|++.+.||+|+||.||+|      +.||+|++........  ......+.+.+|+.+++.++|               
T Consensus         5 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~--~~~~~~~~~~~E~~~l~~l~h---------------   67 (283)
T 3bhy_A            5 DHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSS--RRGVSREEIEREVNILREIRH---------------   67 (283)
T ss_dssp             HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTC--SSSBCHHHHHHHHHHHHHCCC---------------
T ss_pred             hhhhhHHhhcccCceEEEEEEEcCCCCeeehHHhhhcccccc--ccchHHHHHHHHHHHHHhCCC---------------
Confidence            45899999999999999999      7999999987542111  111234678899999999998               


Q ss_pred             ccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc---cCCHHHHHHHHHHHHHHHHH
Q psy9184         335 LKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK---YRSPNQTYAMILQVVFSLAV  411 (562)
Q Consensus       335 ~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~---~l~e~~i~~I~~QIl~aL~y  411 (562)
                                 |||+++++++.+             .+..|+||||+.+|++.+.+.   .+++.+++.++.||+.||.|
T Consensus        68 -----------~~i~~~~~~~~~-------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~  123 (283)
T 3bhy_A           68 -----------PNIITLHDIFEN-------------KTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQILDGVHY  123 (283)
T ss_dssp             -----------TTBCCEEEEEEC-------------SSEEEEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHH
T ss_pred             -----------CCeeehhheecC-------------CCeEEEEEeecCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHH
Confidence                       999999998875             558999999999998877663   48999999999999999999


Q ss_pred             HHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecCC----cEEEeecCCCccccCC-
Q psy9184         412 AEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVGE----KICYYDLSQDEELFEG-  486 (562)
Q Consensus       412 LH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~~----g~v~~~l~~~pelF~g-  486 (562)
                      ||+ .||+||||||+|||++.++..                ...++|+|||+++.....    ....+..|++||++.+ 
T Consensus       124 lH~-~~i~H~dl~p~Nil~~~~~~~----------------~~~~kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~  186 (283)
T 3bhy_A          124 LHS-KRIAHFDLKPENIMLLDKNVP----------------NPRIKLIDFGIAHKIEAGNEFKNIFGTPEFVAPEIVNYE  186 (283)
T ss_dssp             HHH-TTEECSCCSGGGEEESCSSSS----------------SCCEEECCCTTCEECC--------CCCGGGCCHHHHTTC
T ss_pred             HHh-CCccCCCCChHHEEEecCCCC----------------CCceEEEecccceeccCCCcccccCCCcCccCcceecCC
Confidence            999 799999999999999877521                126999999999876542    2335677899998876 


Q ss_pred             CCCcHHHHHHHhhcccCCCCCCCCCCChhhhHHHHHHHHhhcccCCCCCCCchhHHHHHHHHHHHhcCCCcCcCC
Q psy9184         487 EGDYQFDMYRMMRKQCQNNWQNFTPKNNVFWIHYLVDKATCLKKGYQYLRAPRHQAFELLEELGQNALHFDSCYE  561 (562)
Q Consensus       487 ~~~~q~dIy~lm~~~~~~~W~~~~P~tn~~wl~yl~~~Ll~~~~~~~~~~~~~~~~~~~l~~l~~~~l~~~s~~~  561 (562)
                      ......|||++.-... ..+.+..|+........ ...+..  ..+..........-..+.+|...+|..+...|
T Consensus       187 ~~~~~~Di~slG~il~-~l~~g~~p~~~~~~~~~-~~~~~~--~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R  257 (283)
T 3bhy_A          187 PLGLEADMWSIGVITY-ILLSGASPFLGETKQET-LTNISA--VNYDFDEEYFSNTSELAKDFIRRLLVKDPKRR  257 (283)
T ss_dssp             CCCTHHHHHHHHHHHH-HHHHSSCTTCCSSHHHH-HHHHHT--TCCCCCHHHHTTCCHHHHHHHHTTSCSSGGGS
T ss_pred             CCCcchhhhhHHHHHH-HHHHCCCCCCCcchHHH-HHHhHh--cccCCcchhcccCCHHHHHHHHHHccCCHhHC
Confidence            4566799988643332 23333344422211111 111221  11111000000113456777788887776654

>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A

Probab=99.93  E-value=5e-26  Score=238.71  Aligned_cols=191  Identities=14%  Similarity=0.189  Sum_probs=144.7

Q ss_pred             CCCceeeeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCccccc
Q psy9184         261 SALKNCKKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTEL  334 (562)
Q Consensus       261 ~~y~~~~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~l  334 (562)
                      .+|.+.+.||+|+||.||+|      +.||||++....      ........+.+|+.+++.++|               
T Consensus        42 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~------~~~~~~~~~~~E~~~l~~l~h---------------  100 (371)
T 4exu_A           42 KTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPF------QSEIFAKRAYRELLLLKHMQH---------------  100 (371)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTT------SSHHHHHHHHHHHHHHHHCCC---------------
T ss_pred             ccEEEEeEEecCCCeEEEEEEECCCCCEEEEEEecccc------cchhHHHHHHHHHHHHHhcCC---------------
Confidence            67999999999999999999      799999998643      224445778899999999998               


Q ss_pred             ccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc-cCCHHHHHHHHHHHHHHHHHHH
Q psy9184         335 LKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK-YRSPNQTYAMILQVVFSLAVAE  413 (562)
Q Consensus       335 ~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~-~l~e~~i~~I~~QIl~aL~yLH  413 (562)
                                 |||++++++|.....       .......|+||||+. |++...+. .+++..++.++.||+.||.|||
T Consensus       101 -----------~niv~~~~~~~~~~~-------~~~~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~i~~qi~~aL~~LH  161 (371)
T 4exu_A          101 -----------ENVIGLLDVFTPASS-------LRNFYDFYLVMPFMQ-TDLQKIMGMEFSEEKIQYLVYQMLKGLKYIH  161 (371)
T ss_dssp             -----------TTBCCCSEEECSCSS-------STTCCCCEEEEECCC-EEHHHHTTSCCCHHHHHHHHHHHHHHHHHHH
T ss_pred             -----------CCchhhhhheeccCC-------cccceeEEEEEcccc-ccHHHHhhcCCCHHHHHHHHHHHHHHHHHHH
Confidence                       899999888865220       011124599999997 44554443 4899999999999999999999


Q ss_pred             hhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecC--CcEEEeecCCCccccCC--CCC
Q psy9184         414 VELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVG--EKICYYDLSQDEELFEG--EGD  489 (562)
Q Consensus       414 ~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~--~g~v~~~l~~~pelF~g--~~~  489 (562)
                      + .||+||||||+|||++.++                    .+||+|||+|+....  .+.+++..|++||++.+  ..+
T Consensus       162 ~-~~ivH~Dikp~NIll~~~~--------------------~~kL~Dfg~a~~~~~~~~~~~~t~~y~aPE~~~~~~~~~  220 (371)
T 4exu_A          162 S-AGVVHRDLKPGNLAVNEDC--------------------ELKILDFGLARHADAEMTGYVVTRWYRAPEVILSWMHYN  220 (371)
T ss_dssp             H-TTCCCSCCCGGGEEECTTC--------------------CEEECSTTCC--------CTTCCCTTSCHHHHSCCSCCC
T ss_pred             H-CCCcCCCcCHHHeEECCCC--------------------CEEEEecCcccccccCcCCcccCccccCHHHhcCCCCCC
Confidence            9 7999999999999999886                    799999999987654  23345778999998876  455


Q ss_pred             cHHHHHHHhhcccCCCCCCCCCCC
Q psy9184         490 YQFDMYRMMRKQCQNNWQNFTPKN  513 (562)
Q Consensus       490 ~q~dIy~lm~~~~~~~W~~~~P~t  513 (562)
                      ...|||++.-... ..+.+..|+.
T Consensus       221 ~~~DiwslG~il~-el~~g~~pf~  243 (371)
T 4exu_A          221 QTVDIWSVGCIMA-EMLTGKTLFK  243 (371)
T ss_dssp             TTHHHHHHHHHHH-HHHHSSCSCC
T ss_pred             cHHhHHHHHHHHH-HHHhCCCCCC
Confidence            6699988644332 3334444553

>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*

Probab=99.93  E-value=1.2e-26  Score=231.64  Aligned_cols=230  Identities=16%  Similarity=0.203  Sum_probs=167.1

Q ss_pred             CCCceeeeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCccccc
Q psy9184         261 SALKNCKKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTEL  334 (562)
Q Consensus       261 ~~y~~~~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~l  334 (562)
                      ++|++.+.||+|+||.||+|      +.||+|++....      ......+.+.+|+.+++.++|               
T Consensus         6 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~------~~~~~~~~~~~e~~~l~~l~h---------------   64 (279)
T 2w5a_A            6 EDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGS------MTEAEKQMLVSEVNLLRELKH---------------   64 (279)
T ss_dssp             GGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEECTT------CCHHHHHHHHHHHHHHHHCCC---------------
T ss_pred             hheeeehhccCCCCcEEEEEEECCCCcEEEEEEEEccc------CCHHHHHHHHHHHHHHHhcCC---------------
Confidence            57999999999999999999      789999998653      123445678999999999998               


Q ss_pred             ccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCcccccc-------CCHHHHHHHHHHHHH
Q psy9184         335 LKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIKY-------RSPNQTYAMILQVVF  407 (562)
Q Consensus       335 ~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~~-------l~e~~i~~I~~QIl~  407 (562)
                                 |||+++++++....           ...+|+||||++||++.+.+..       +++..++.++.||+.
T Consensus        65 -----------~~i~~~~~~~~~~~-----------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~  122 (279)
T 2w5a_A           65 -----------PNIVRYYDRIIDRT-----------NTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTL  122 (279)
T ss_dssp             -----------TTBCCEEEEEEEGG-----------GTEEEEEEECCTTEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHH
T ss_pred             -----------CCCCeEEEEEecCC-----------CceEEEEEeCCCCCCHHHHHHhhcccCCCCCHHHHHHHHHHHHH
Confidence                       99999998775422           4589999999999888766642       899999999999999


Q ss_pred             HHHHHHhhCC-----eEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecCC-----cEEEeec
Q psy9184         408 SLAVAEVELE-----FEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVGE-----KICYYDL  477 (562)
Q Consensus       408 aL~yLH~~~~-----IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~~-----g~v~~~l  477 (562)
                      ||.|||+ .+     |+||||||+|||++.++                    .+||+|||+++.....     ....+..
T Consensus       123 ~l~~lH~-~~~~~~~ivH~dl~p~NIl~~~~~--------------------~~kl~dfg~~~~~~~~~~~~~~~~~~~~  181 (279)
T 2w5a_A          123 ALKECHR-RSDGGHTVLHRDLKPANVFLDGKQ--------------------NVKLGDFGLARILNHDTSFAKTFVGTPY  181 (279)
T ss_dssp             HHHHHHH-HC------CCCCCSGGGEEECSSS--------------------CEEECCCCHHHHC---CHHHHHHHSCCT
T ss_pred             HHHHHhc-ccCCCCeeEEeccchhhEEEcCCC--------------------CEEEecCchheeeccccccccccCCCcc
Confidence            9999999 58     99999999999998876                    7999999999865432     2234667


Q ss_pred             CCCccccCCC-CCcHHHHHHHhhcccCCCCCCCCCCChhhhHHHHHHHHhhcccCCCCCCCchhHHHHHHHHHHHhcCCC
Q psy9184         478 SQDEELFEGE-GDYQFDMYRMMRKQCQNNWQNFTPKNNVFWIHYLVDKATCLKKGYQYLRAPRHQAFELLEELGQNALHF  556 (562)
Q Consensus       478 ~~~pelF~g~-~~~q~dIy~lm~~~~~~~W~~~~P~tn~~wl~yl~~~Ll~~~~~~~~~~~~~~~~~~~l~~l~~~~l~~  556 (562)
                      |++||++.+. .+...|||++.-... ..+.+..|+.... ...+...+.. +. +.....   ..-..+.+|...+|..
T Consensus       182 y~aPE~~~~~~~~~~~Di~slG~il~-~l~~g~~p~~~~~-~~~~~~~i~~-~~-~~~~~~---~~~~~l~~li~~~l~~  254 (279)
T 2w5a_A          182 YMSPEQMNRMSYNEKSDIWSLGCLLY-ELCALMPPFTAFS-QKELAGKIRE-GK-FRRIPY---RYSDELNEIITRMLNL  254 (279)
T ss_dssp             TCCHHHHHCC-CCHHHHHHHHHHHHH-HHHHSSCSSCCSS-HHHHHHHHHH-TC-CCCCCT---TSCHHHHHHHHHHTCS
T ss_pred             ccChHHhccCCCCchhhHHHHHHHHH-HHHHCCCCCcccC-HHHHHHHHhh-cc-cccCCc---ccCHHHHHHHHHHcCC
Confidence            8999988773 566699988643332 2333344443222 1222333333 11 111111   1134677888999988


Q ss_pred             cCcCC
Q psy9184         557 DSCYE  561 (562)
Q Consensus       557 ~s~~~  561 (562)
                      +...|
T Consensus       255 ~p~~R  259 (279)
T 2w5a_A          255 KDYHR  259 (279)
T ss_dssp             SGGGS
T ss_pred             CcccC
Confidence            87655

>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...

Probab=99.93  E-value=4.8e-26  Score=227.59  Aligned_cols=171  Identities=24%  Similarity=0.303  Sum_probs=141.4

Q ss_pred             CCCCCceeeeeeccCceEEEEE-----eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCcccc
Q psy9184         259 PSSALKNCKKIGEGVYGEVFKL-----NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTE  333 (562)
Q Consensus       259 ~~~~y~~~~~LG~GsfG~Vyka-----~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~  333 (562)
                      +.++|++.+.||+|+||.||+|     ..||+|++....         ...+.+.+|+.+++.++|              
T Consensus        11 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~---------~~~~~~~~E~~~l~~l~h--------------   67 (279)
T 1qpc_A           11 PRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS---------MSPDAFLAEANLMKQLQH--------------   67 (279)
T ss_dssp             CGGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTS---------SCHHHHHHHHHHHHHCCC--------------
T ss_pred             CHHhhhheeeecCCCCeEEEEEEEcCCcEEEEEEecCCc---------ccHHHHHHHHHHHHhCCC--------------
Confidence            3467999999999999999999     689999997543         113568899999999998              


Q ss_pred             cccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc-----cCCHHHHHHHHHHHHHH
Q psy9184         334 LLKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK-----YRSPNQTYAMILQVVFS  408 (562)
Q Consensus       334 l~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~-----~l~e~~i~~I~~QIl~a  408 (562)
                                  |||+++++++.              ++..|+||||+.||++.+.+.     .+++.++..++.||+.|
T Consensus        68 ------------~~i~~~~~~~~--------------~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~  121 (279)
T 1qpc_A           68 ------------QRLVRLYAVVT--------------QEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEG  121 (279)
T ss_dssp             ------------TTBCCEEEEEC--------------SSSCEEEEECCTTCBHHHHTTSHHHHTCCHHHHHHHHHHHHHH
T ss_pred             ------------cCcceEEEEEc--------------CCCcEEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHH
Confidence                        99999998875              335899999999998877664     48999999999999999


Q ss_pred             HHHHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecCC------cEEEeecCCCcc
Q psy9184         409 LAVAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVGE------KICYYDLSQDEE  482 (562)
Q Consensus       409 L~yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~~------g~v~~~l~~~pe  482 (562)
                      |.|||+ .||+||||||+|||++.++                    .++|+|||+++.....      +..++..|++||
T Consensus       122 l~~lH~-~~i~H~dikp~Nil~~~~~--------------------~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE  180 (279)
T 1qpc_A          122 MAFIEE-RNYIHRDLRAANILVSDTL--------------------SCKIADFGLARLIEDNEYTAREGAKFPIKWTAPE  180 (279)
T ss_dssp             HHHHHH-TTEECSCCSGGGEEECTTS--------------------CEEECCCTTCEECSSSCEECCTTCCCCTTTSCHH
T ss_pred             HHHHHH-CCeeccCCCHhhEEEcCCC--------------------CEEECCCcccccccCcccccccCCCCccCccChh
Confidence            999999 7999999999999998776                    7999999999876542      223345688999


Q ss_pred             ccCC-CCCcHHHHHHHhh
Q psy9184         483 LFEG-EGDYQFDMYRMMR  499 (562)
Q Consensus       483 lF~g-~~~~q~dIy~lm~  499 (562)
                      ++.+ ..+...|||++.-
T Consensus       181 ~~~~~~~~~~~Di~slG~  198 (279)
T 1qpc_A          181 AINYGTFTIKSDVWSFGI  198 (279)
T ss_dssp             HHHHCEECHHHHHHHHHH
T ss_pred             hhccCCCCchhhhHHHHH
Confidence            8875 3455689988643

>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*

Probab=99.93  E-value=1.1e-26  Score=234.54  Aligned_cols=230  Identities=16%  Similarity=0.210  Sum_probs=161.6

Q ss_pred             CCCCCceeeeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCccc
Q psy9184         259 PSSALKNCKKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFT  332 (562)
Q Consensus       259 ~~~~y~~~~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv  332 (562)
                      +.++|++.+.||+|+||.||+|      ..||+|++....        ....+.+.+|+.+++.++|             
T Consensus        17 ~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~--------~~~~~~~~~e~~~l~~l~h-------------   75 (302)
T 2j7t_A           17 PNEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKS--------EEELEDYIVEIEILATCDH-------------   75 (302)
T ss_dssp             GGGTEEEEEEEECSTTCCEEEEEETTTCCEEEEEEEC------------CCHHHHHHHHHHHHHCCC-------------
T ss_pred             CccceeecceeccCCCeEEEEEEEcCCCcEEEEEEecCCC--------HHHHHHHHHHHHHHhcCCC-------------
Confidence            3477999999999999999999      789999987542        2334678899999999988             


Q ss_pred             ccccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc----cCCHHHHHHHHHHHHHH
Q psy9184         333 ELLKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK----YRSPNQTYAMILQVVFS  408 (562)
Q Consensus       333 ~l~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~----~l~e~~i~~I~~QIl~a  408 (562)
                                   |||+++++++..             ++.+|+||||+++|++.+.+.    .+++..++.++.||+.|
T Consensus        76 -------------~~i~~~~~~~~~-------------~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~  129 (302)
T 2j7t_A           76 -------------PYIVKLLGAYYH-------------DGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEA  129 (302)
T ss_dssp             -------------TTBCCEEEEEEC-------------C-CEEEEEECCTTEEHHHHHHHHTSCCCHHHHHHHHHHHHHH
T ss_pred             -------------CCEeeeeeeeee-------------CCeEEEEEEeCCCCcHHHHHHhhccCCCHHHHHHHHHHHHHH
Confidence                         999999998875             458999999999887655442    38999999999999999


Q ss_pred             HHHHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecC-----CcEEEeecCCCccc
Q psy9184         409 LAVAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVG-----EKICYYDLSQDEEL  483 (562)
Q Consensus       409 L~yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~-----~g~v~~~l~~~pel  483 (562)
                      |.|||+ .||+||||||+|||++.++                    .+||+|||++.....     ....++..|++||+
T Consensus       130 l~~lH~-~~i~H~dlkp~Nil~~~~~--------------------~~kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~  188 (302)
T 2j7t_A          130 LNFLHS-KRIIHRDLKAGNVLMTLEG--------------------DIRLADFGVSAKNLKTLQKRDSFIGTPYWMAPEV  188 (302)
T ss_dssp             HHHHHH-TTCCCCCCSGGGEEECTTS--------------------CEEECCCHHHHHHHHHHHC-----CCGGGCCHHH
T ss_pred             HHHHhc-CCcccCCCCHHHEEECCCC--------------------CEEEEECCCCccccccccccccccCChhhcCCee
Confidence            999999 7999999999999998876                    799999999864321     33456778999998


Q ss_pred             cC------CCCCcHHHHHHHhhcccCCCCCCCCCCChhhhHHHHHHHHhhcccCCCCCCCchhHHHHHHHHHHHhcCCCc
Q psy9184         484 FE------GEGDYQFDMYRMMRKQCQNNWQNFTPKNNVFWIHYLVDKATCLKKGYQYLRAPRHQAFELLEELGQNALHFD  557 (562)
Q Consensus       484 F~------g~~~~q~dIy~lm~~~~~~~W~~~~P~tn~~wl~yl~~~Ll~~~~~~~~~~~~~~~~~~~l~~l~~~~l~~~  557 (562)
                      +.      +..+...|||++.-... ..+.+..|+........+. .+.. .. .+. .......-..+.+|...+|..+
T Consensus       189 ~~~~~~~~~~~~~~~Di~slG~il~-~l~~g~~p~~~~~~~~~~~-~~~~-~~-~~~-~~~~~~~~~~l~~li~~~l~~d  263 (302)
T 2j7t_A          189 VMCETMKDTPYDYKADIWSLGITLI-EMAQIEPPHHELNPMRVLL-KIAK-SD-PPT-LLTPSKWSVEFRDFLKIALDKN  263 (302)
T ss_dssp             HHHHHTTSTTTTTHHHHHHHHHHHH-HHHHSSCTTTTSCHHHHHH-HHHH-SC-CCC-CSSGGGSCHHHHHHHHHHSCSC
T ss_pred             eccccCCCCCCchhhhHHHHHHHHH-HHhcCCCCCccCCHHHHHH-HHhc-cC-Ccc-cCCccccCHHHHHHHHHHcccC
Confidence            73      34566799988644332 2233334443222122222 2222 11 111 0111112345677788888877


Q ss_pred             CcCC
Q psy9184         558 SCYE  561 (562)
Q Consensus       558 s~~~  561 (562)
                      ...|
T Consensus       264 p~~R  267 (302)
T 2j7t_A          264 PETR  267 (302)
T ss_dssp             TTTS
T ss_pred             hhhC
Confidence            6655

>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}

Probab=99.93  E-value=5.3e-26  Score=239.33  Aligned_cols=193  Identities=17%  Similarity=0.154  Sum_probs=138.4

Q ss_pred             CCCCceeeeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCcccc
Q psy9184         260 SSALKNCKKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTE  333 (562)
Q Consensus       260 ~~~y~~~~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~  333 (562)
                      ..+|++.+.||+|+||.||+|      +.||||++.....            ...+|+.+++.++|              
T Consensus         6 ~~~y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~------------~~~~E~~il~~l~h--------------   59 (383)
T 3eb0_A            6 SKKYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDPR------------YKNRELDIMKVLDH--------------   59 (383)
T ss_dssp             CTTEEEEEEEECC-CEEEEEEEETTTCCEEEEEEEECCTT------------SCCHHHHHHTTCCC--------------
T ss_pred             cceEEEEEEEEeccCEEEEEEEECCCCCEEEEEEEecCcc------------hHHHHHHHHHHcCC--------------
Confidence            478999999999999999999      7999999976531            12369999999998              


Q ss_pred             cccccccCCCCCCCceeehhhhhccccCCCC---------------------C----CCCCCCCeEEEEEEecCCCCCcc
Q psy9184         334 LLKCSCVRGRYPDRLVTLWEEFAKTKKSYND---------------------H----PSMFEEDQIFIILELKNGGNDSG  388 (562)
Q Consensus       334 l~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~---------------------~----p~~~~~~~l~LVmE~~~gG~ll~  388 (562)
                                  |||++++++|......+..                     +    ........+++||||+.| ++.+
T Consensus        60 ------------pnIv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~-~L~~  126 (383)
T 3eb0_A           60 ------------VNIIKLVDYFYTTGDEEPKPPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVPD-TLHK  126 (383)
T ss_dssp             ------------TTBCCEEEEEEEC-------------------------------------CCEEEEEECCCSE-EHHH
T ss_pred             ------------CCccchhheeeecCcccccccccccccccccccccccccccccccccCCCceEEEEEEecCCc-cHHH
Confidence                        7777776666432110000                     0    000124568999999984 4433


Q ss_pred             cc-------ccCCHHHHHHHHHHHHHHHHHHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEec
Q psy9184         389 DI-------KYRSPNQTYAMILQVVFSLAVAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDF  461 (562)
Q Consensus       389 ~l-------~~l~e~~i~~I~~QIl~aL~yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DF  461 (562)
                      .+       ..+++..++.++.||+.||.|||+ .||+||||||+|||++..+.                   .+||+||
T Consensus       127 ~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~-~gi~H~Dikp~Nil~~~~~~-------------------~~kl~Df  186 (383)
T 3eb0_A          127 VLKSFIRSGRSIPMNLISIYIYQLFRAVGFIHS-LGICHRDIKPQNLLVNSKDN-------------------TLKLCDF  186 (383)
T ss_dssp             HHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHT-TTEECSCCCGGGEEEETTTT-------------------EEEECCC
T ss_pred             HHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHH-CcCccCccCHHHEEEcCCCC-------------------cEEEEEC
Confidence            33       248999999999999999999999 79999999999999985331                   7999999


Q ss_pred             cceeeecC----CcEEEeecCCCccccCCC--CCcHHHHHHHhhcccCCCCCCCCCC
Q psy9184         462 TISRCFVG----EKICYYDLSQDEELFEGE--GDYQFDMYRMMRKQCQNNWQNFTPK  512 (562)
Q Consensus       462 GLSr~~~~----~g~v~~~l~~~pelF~g~--~~~q~dIy~lm~~~~~~~W~~~~P~  512 (562)
                      |+|+....    .....+..|++||++.+.  .....|||++.-... ..+.+..|+
T Consensus       187 g~a~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~-ell~g~~pf  242 (383)
T 3eb0_A          187 GSAKKLIPSEPSVAYICSRFYRAPELMLGATEYTPSIDLWSIGCVFG-ELILGKPLF  242 (383)
T ss_dssp             TTCEECCTTSCCCCCCCCSSCCCHHHHTTCSSCCTHHHHHHHHHHHH-HHHHSSCSS
T ss_pred             CCCcccCCCCCCcCcccCCCccCHHHhcCCCCCCcchhhhhHHHHHH-HHHhCCCCC
Confidence            99997654    233457789999988763  566799988643332 333344444

>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*

Probab=99.93  E-value=1.5e-25  Score=228.71  Aligned_cols=195  Identities=19%  Similarity=0.198  Sum_probs=144.7

Q ss_pred             CCCceeeeeeccCceEEEEE-------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCcccc
Q psy9184         261 SALKNCKKIGEGVYGEVFKL-------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTE  333 (562)
Q Consensus       261 ~~y~~~~~LG~GsfG~Vyka-------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~  333 (562)
                      ++|++.+.||+|+||.||+|       +.||||++...         ....+.+.+|+.+++.++|...           
T Consensus        14 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~---------~~~~~~~~~e~~~l~~l~~~~~-----------   73 (339)
T 1z57_A           14 ARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNV---------DRYCEAARSEIQVLEHLNTTDP-----------   73 (339)
T ss_dssp             TTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSS---------HHHHHHHHHHHHHHHHHHHHCT-----------
T ss_pred             CceEEEEEEecCCCeEEEEEEecCCCCcEEEEEEEecC---------CchhHHHHHHHHHHHHhhhcCC-----------
Confidence            68999999999999999999       68999999743         2344678899999999987210           


Q ss_pred             cccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc-----cCCHHHHHHHHHHHHHH
Q psy9184         334 LLKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK-----YRSPNQTYAMILQVVFS  408 (562)
Q Consensus       334 l~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~-----~l~e~~i~~I~~QIl~a  408 (562)
                               ..|+++++++++|..             .+.+|+||||+ +|++.+.+.     .+++.+++.++.||+.|
T Consensus        74 ---------~~~~~i~~~~~~~~~-------------~~~~~lv~e~~-~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~~  130 (339)
T 1z57_A           74 ---------NSTFRCVQMLEWFEH-------------HGHICIVFELL-GLSTYDFIKENGFLPFRLDHIRKMAYQICKS  130 (339)
T ss_dssp             ---------TCTTCBCCEEEEEEE-------------TTEEEEEEECC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHH
T ss_pred             ---------CCceeeEeeeccccc-------------CCcEEEEEcCC-CCCHHHHHHhcCCCCCcHHHHHHHHHHHHHH
Confidence                     113578999988875             55899999999 677776654     37899999999999999


Q ss_pred             HHHHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecC--CcEEEeecCCCccccCC
Q psy9184         409 LAVAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVG--EKICYYDLSQDEELFEG  486 (562)
Q Consensus       409 L~yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~--~g~v~~~l~~~pelF~g  486 (562)
                      |+|||+ .||+||||||+|||++..+..... ...............+||+|||+|+....  ....++..|++||++.+
T Consensus       131 l~~lH~-~~ivH~Dlkp~Nil~~~~~~~~~~-~~~~~~~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~gt~~y~aPE~~~~  208 (339)
T 1z57_A          131 VNFLHS-NKLTHTDLKPENILFVQSDYTEAY-NPKIKRDERTLINPDIKVVDFGSATYDDEHHSTLVSTRHYRAPEVILA  208 (339)
T ss_dssp             HHHHHH-TTEECCCCCGGGEEESCCCEEEEE-C----CEEEEESCCCEEECCCSSCEETTSCCCSSCSCGGGCCHHHHTT
T ss_pred             HHHHHH-CCCcCCCCCHHHEEEecccccccc-CCccccccccccCCCceEeeCcccccCccccccccCCccccChHHhhC
Confidence            999999 799999999999999875310000 00000000000122699999999987654  23455778999999877


Q ss_pred             -CCCcHHHHHHHhhc
Q psy9184         487 -EGDYQFDMYRMMRK  500 (562)
Q Consensus       487 -~~~~q~dIy~lm~~  500 (562)
                       ..+...|||++.-.
T Consensus       209 ~~~~~~~Di~slG~i  223 (339)
T 1z57_A          209 LGWSQPCDVWSIGCI  223 (339)
T ss_dssp             SCCCTHHHHHHHHHH
T ss_pred             CCCCcchhhHHHHHH
Confidence             45677999986433

>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A

Probab=99.93  E-value=6.1e-26  Score=244.77  Aligned_cols=171  Identities=19%  Similarity=0.234  Sum_probs=141.1

Q ss_pred             CCCCCceeeeeeccCceEEEEE----eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCccccc
Q psy9184         259 PSSALKNCKKIGEGVYGEVFKL----NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTEL  334 (562)
Q Consensus       259 ~~~~y~~~~~LG~GsfG~Vyka----~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~l  334 (562)
                      ..++|++.+.||+|+||.||+|    +.||||+++...          ..+.+.+|+.+++.++|               
T Consensus       191 ~~~~~~~~~~lG~G~fg~V~~~~~~~~~vavK~~~~~~----------~~~~~~~E~~~l~~l~h---------------  245 (450)
T 1k9a_A          191 NMKELKLLQTIGKGEFGDVMLGDYRGNKVAVKCIKNDA----------TAQAFLAEASVMTQLRH---------------  245 (450)
T ss_dssp             CGGGEEEEEEEEECSSEEEEEEEETTEEEEEEEESSCT----------TSHHHHHHHHHHHTCCC---------------
T ss_pred             ChHHeEEEeeecCcCCeeEEEEEecCCeEEEEEeCCch----------HHHHHHHHHHHHHhccC---------------
Confidence            3467899999999999999999    899999997542          22578899999999998               


Q ss_pred             ccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCcccccc-----CCHHHHHHHHHHHHHHH
Q psy9184         335 LKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIKY-----RSPNQTYAMILQVVFSL  409 (562)
Q Consensus       335 ~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~~-----l~e~~i~~I~~QIl~aL  409 (562)
                                 |||+++++++..            ..+.+|+||||+.+|++.+.+..     +++..+..++.||+.||
T Consensus       246 -----------~niv~~~~~~~~------------~~~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l  302 (450)
T 1k9a_A          246 -----------SNLVQLLGVIVE------------EKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAM  302 (450)
T ss_dssp             -----------TTBCCEEEEEEC------------TTSCEEEEEECCTTCBHHHHHHHHCTTTCCHHHHHHHHHHHHHHH
T ss_pred             -----------CCEEEEEEEEEc------------CCCceEEEEEecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHH
Confidence                       999999988754            13479999999999988776642     78999999999999999


Q ss_pred             HHHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecCC--cEEEeecCCCccccCC-
Q psy9184         410 AVAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVGE--KICYYDLSQDEELFEG-  486 (562)
Q Consensus       410 ~yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~~--g~v~~~l~~~pelF~g-  486 (562)
                      .|||+ .+|+||||||+|||++.++                    .+||+|||+|+.....  ....+..|++||++.+ 
T Consensus       303 ~~LH~-~~ivHrDlkp~Nill~~~~--------------------~~kl~DfG~a~~~~~~~~~~~~~~~y~aPE~~~~~  361 (450)
T 1k9a_A          303 EYLEG-NNFVHRDLAARNVLVSEDN--------------------VAKVSDFGLTKEASSTQDTGKLPVKWTAPEALREK  361 (450)
T ss_dssp             HHHHH-TTEECSCCCGGGEEECTTS--------------------CEEECCCTTCEECC------CCCTTTSCHHHHHSS
T ss_pred             HHHHh-CCeeCCCCCHhhEEECCCC--------------------CEEEeeCCCcccccccccCCCCCcceeCHHHhcCC
Confidence            99999 7999999999999999876                    7999999999865432  1233556899998866 


Q ss_pred             CCCcHHHHHHHh
Q psy9184         487 EGDYQFDMYRMM  498 (562)
Q Consensus       487 ~~~~q~dIy~lm  498 (562)
                      ..+...|||++.
T Consensus       362 ~~~~~sDvwslG  373 (450)
T 1k9a_A          362 KFSTKSDVWSFG  373 (450)
T ss_dssp             CCCHHHHHHHHH
T ss_pred             CCCcHHHHHHHH
Confidence            456679998853

>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}

Probab=99.93  E-value=3.2e-26  Score=233.11  Aligned_cols=177  Identities=17%  Similarity=0.182  Sum_probs=142.2

Q ss_pred             CCCCCceeeeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCccc
Q psy9184         259 PSSALKNCKKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFT  332 (562)
Q Consensus       259 ~~~~y~~~~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv  332 (562)
                      ..++|++.+.||+|+||.||+|      +.||||++....        ....+.+.+|+.+++.++|             
T Consensus        27 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--------~~~~~~~~~E~~~l~~l~h-------------   85 (317)
T 2buj_A           27 DNKHYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHE--------QQDREEAQREADMHRLFNH-------------   85 (317)
T ss_dssp             TTEEEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEESS--------HHHHHHHHHHHHHHHTCCC-------------
T ss_pred             CCeEEEEEEEecCCCCeEEEEEEecCCCcEEEEEEEecCC--------HHHHHHHHHHHHHHhhcCC-------------
Confidence            3467999999999999999999      789999997642        3455678899999999988             


Q ss_pred             ccccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc-------cCCHHHHHHHHHHH
Q psy9184         333 ELLKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK-------YRSPNQTYAMILQV  405 (562)
Q Consensus       333 ~l~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~-------~l~e~~i~~I~~QI  405 (562)
                                   |||+++++++....         ......|+||||+.+|++.+.+.       .+++.+++.++.||
T Consensus        86 -------------~~iv~~~~~~~~~~---------~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi  143 (317)
T 2buj_A           86 -------------PNILRLVAYCLRER---------GAKHEAWLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGI  143 (317)
T ss_dssp             -------------TTBCCCCEEEEEEE---------TTEEEEEEEEECCTTCBHHHHHHHHHTTTCCCCHHHHHHHHHHH
T ss_pred             -------------CCeeeEEEEEEecc---------CCCceeEEEEEeCCCCcHHHHHHHHHhcCCCCCHHHHHHHHHHH
Confidence                         99999998886321         01347899999999998866553       38999999999999


Q ss_pred             HHHHHHHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecCC--------------c
Q psy9184         406 VFSLAVAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVGE--------------K  471 (562)
Q Consensus       406 l~aL~yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~~--------------g  471 (562)
                      +.||.|||+ .||+||||||+|||++.++                    .++|+|||+++.....              .
T Consensus       144 ~~~L~~LH~-~~ivH~dlkp~NIl~~~~~--------------------~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~  202 (317)
T 2buj_A          144 CRGLEAIHA-KGYAHRDLKPTNILLGDEG--------------------QPVLMDLGSMNQACIHVEGSRQALTLQDWAA  202 (317)
T ss_dssp             HHHHHHHHH-TTEECCCCCGGGEEECTTS--------------------CEEECCCSSCEESCEEEESHHHHHHHHHHHH
T ss_pred             HHHHHHHHh-CCcccCCCCHHHEEEcCCC--------------------CEEEEecCcchhccccccccccccccccccc
Confidence            999999999 7999999999999998876                    7999999998865320              1


Q ss_pred             EEEeecCCCccccCCCC----CcHHHHHHHhh
Q psy9184         472 ICYYDLSQDEELFEGEG----DYQFDMYRMMR  499 (562)
Q Consensus       472 ~v~~~l~~~pelF~g~~----~~q~dIy~lm~  499 (562)
                      ..++..|++||++.+..    ....|||++.-
T Consensus       203 ~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~  234 (317)
T 2buj_A          203 QRCTISYRAPELFSVQSHCVIDERTDVWSLGC  234 (317)
T ss_dssp             HHSCGGGCCGGGSSCCSEEEECTHHHHHHHHH
T ss_pred             ccCCcccCCHhHhccCCCcCCCchhhHHHHHH
Confidence            12266799999987643    55799988643

>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*

Probab=99.93  E-value=3.1e-25  Score=230.55  Aligned_cols=196  Identities=18%  Similarity=0.188  Sum_probs=144.6

Q ss_pred             CCCCceeeeeeccCceEEEEE-----eeEEEEEeecCCCCCCc---chhHHHHHHHHHHHHHHHhcCCccccCCCCCCcc
Q psy9184         260 SSALKNCKKIGEGVYGEVFKL-----NNSVIKIMPIEGDQSVN---GEEQKKFREIFSEIMVTKETSDLQYRTENSTPCF  331 (562)
Q Consensus       260 ~~~y~~~~~LG~GsfG~Vyka-----~~vAIKii~~~~~~~~~---~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~f  331 (562)
                      .++|++.+.||+|+||.||+|     ..||||++.........   .......+.+.+|+.+++.++|            
T Consensus        21 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h------------   88 (362)
T 3pg1_A           21 QSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHH------------   88 (362)
T ss_dssp             TCSCEEEEEEEEETTEEEEEEECTTSCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHHCCC------------
T ss_pred             ccceEEeEEeccCCCEEEEEEECCCCCeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHhCCC------------
Confidence            478999999999999999999     78999999764322110   1223345788999999999998            


Q ss_pred             cccccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc----cCCHHHHHHHHHHHHH
Q psy9184         332 TELLKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK----YRSPNQTYAMILQVVF  407 (562)
Q Consensus       332 v~l~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~----~l~e~~i~~I~~QIl~  407 (562)
                                    |||++++++|....        ......+|+||||+. |++++.+.    .+++..++.++.||+.
T Consensus        89 --------------~~iv~~~~~~~~~~--------~~~~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~  145 (362)
T 3pg1_A           89 --------------PNILGLRDIFVHFE--------EPAMHKLYLVTELMR-TDLAQVIHDQRIVISPQHIQYFMYHILL  145 (362)
T ss_dssp             --------------TTBCCCSEEEEECC--------TTTCCEEEEEEECCS-EEHHHHHHCTTSCCCHHHHHHHHHHHHH
T ss_pred             --------------cCccceeeeEEecc--------CCCcceEEEEEccCC-CCHHHHHHhcccCCCHHHHHHHHHHHHH
Confidence                          99999998885421        012457999999998 55666553    3899999999999999


Q ss_pred             HHHHHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecC----CcEEEeecCCCccc
Q psy9184         408 SLAVAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVG----EKICYYDLSQDEEL  483 (562)
Q Consensus       408 aL~yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~----~g~v~~~l~~~pel  483 (562)
                      ||.|||+ .||+||||||+|||++.++                    .+||+|||+|+....    .....+..|++||+
T Consensus       146 ~l~~lH~-~~ivH~Dlkp~NIl~~~~~--------------------~~kl~Dfg~~~~~~~~~~~~~~~~t~~y~aPE~  204 (362)
T 3pg1_A          146 GLHVLHE-AGVVHRDLHPGNILLADNN--------------------DITICDFNLAREDTADANKTHYVTHRWYRAPEL  204 (362)
T ss_dssp             HHHHHHH-TTCCCCCCCGGGEEECTTC--------------------CEEECCTTC---------------CGGGCCHHH
T ss_pred             HHHHHHH-CcCEecCCChHHEEEcCCC--------------------CEEEEecCcccccccccccceecccceecCcHH
Confidence            9999999 7999999999999998876                    799999999986543    23456777999998


Q ss_pred             cCC--CCCcHHHHHHHhhcccCCCCCCCCCC
Q psy9184         484 FEG--EGDYQFDMYRMMRKQCQNNWQNFTPK  512 (562)
Q Consensus       484 F~g--~~~~q~dIy~lm~~~~~~~W~~~~P~  512 (562)
                      +.+  ......|||++.-... ..+.+..|+
T Consensus       205 ~~~~~~~~~~~DiwslG~il~-~l~~g~~pf  234 (362)
T 3pg1_A          205 VMQFKGFTKLVDMWSAGCVMA-EMFNRKALF  234 (362)
T ss_dssp             HTTCTTCCTHHHHHHHHHHHH-HHHHSSCSC
T ss_pred             hcCCCCCCcHhHHHhHHHHHH-HHHhCCCCC
Confidence            876  3566699988644433 233344444

>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7

Probab=99.93  E-value=4.4e-26  Score=236.47  Aligned_cols=175  Identities=20%  Similarity=0.282  Sum_probs=135.7

Q ss_pred             CCCceeeeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCccccc
Q psy9184         261 SALKNCKKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTEL  334 (562)
Q Consensus       261 ~~y~~~~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~l  334 (562)
                      .+|++.+.||+|+||.||+|      +.||||++......   .........+.+|+.+++.++|               
T Consensus        10 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~---~~~~~~~~~~~~E~~~l~~l~h---------------   71 (346)
T 1ua2_A           10 KRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRS---EAKDGINRTALREIKLLQELSH---------------   71 (346)
T ss_dssp             ---CEEEEEEEETTEEEEEEECSSCCSEEEEEEC---------------CTHHHHHHHHHHHCCC---------------
T ss_pred             cccEEEeEEeecCCEEEEEEEECCCCcEEEEEEEecCCcc---hhhhhhhHHHHHHHHHHhhCCC---------------
Confidence            67999999999999999999      68999999864311   1111122467899999999998               


Q ss_pred             ccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc----cCCHHHHHHHHHHHHHHHH
Q psy9184         335 LKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK----YRSPNQTYAMILQVVFSLA  410 (562)
Q Consensus       335 ~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~----~l~e~~i~~I~~QIl~aL~  410 (562)
                                 |||++++++|.+             .+..|+||||+.+ ++...+.    .+++.+++.++.||+.||.
T Consensus        72 -----------~~iv~~~~~~~~-------------~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~  126 (346)
T 1ua2_A           72 -----------PNIIGLLDAFGH-------------KSNISLVFDFMET-DLEVIIKDNSLVLTPSHIKAYMLMTLQGLE  126 (346)
T ss_dssp             -----------TTBCCEEEEECC-------------TTCCEEEEECCSE-EHHHHHTTCCSSCCSSHHHHHHHHHHHHHH
T ss_pred             -----------CCCCeEEEEEee-------------CCceEEEEEcCCC-CHHHHHHhcCcCCCHHHHHHHHHHHHHHHH
Confidence                       999999999875             4578999999985 4544443    3889999999999999999


Q ss_pred             HHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecC-----CcEEEeecCCCccccC
Q psy9184         411 VAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVG-----EKICYYDLSQDEELFE  485 (562)
Q Consensus       411 yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~-----~g~v~~~l~~~pelF~  485 (562)
                      |||+ .||+||||||+|||++.++                    .+||+|||+|+....     ....++..|++||++.
T Consensus       127 ~lH~-~~ivH~Dlkp~Nil~~~~~--------------------~~kl~Dfg~a~~~~~~~~~~~~~~~t~~y~aPE~~~  185 (346)
T 1ua2_A          127 YLHQ-HWILHRDLKPNNLLLDENG--------------------VLKLADFGLAKSFGSPNRAYTHQVVTRWYRAPELLF  185 (346)
T ss_dssp             HHHH-TTCCCCCCCGGGEEECTTC--------------------CEEECCCGGGSTTTSCCCCCCCSCCCCTTCCHHHHT
T ss_pred             HHHH-CCEECCCCCHHHEEEcCCC--------------------CEEEEecccceeccCCcccCCcccccccccCchHhh
Confidence            9999 7999999999999999886                    799999999987643     2345578899999886


Q ss_pred             CC--CCcHHHHHHHhh
Q psy9184         486 GE--GDYQFDMYRMMR  499 (562)
Q Consensus       486 g~--~~~q~dIy~lm~  499 (562)
                      +.  .+...|||++.-
T Consensus       186 ~~~~~~~~~DiwslG~  201 (346)
T 1ua2_A          186 GARMYGVGVDMWAVGC  201 (346)
T ss_dssp             TCSCCCHHHHHHHHHH
T ss_pred             CCCCCCchhhhHhHHH
Confidence            63  456689988643

>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}

Probab=99.93  E-value=2.8e-26  Score=234.37  Aligned_cols=235  Identities=19%  Similarity=0.250  Sum_probs=162.4

Q ss_pred             CCCCCceeeeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCccc
Q psy9184         259 PSSALKNCKKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFT  332 (562)
Q Consensus       259 ~~~~y~~~~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv  332 (562)
                      ..++|++.+.||+|+||.||+|      +.||||++.....         ....+.+|+.+++.+.+             
T Consensus        22 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~---------~~~~~~~e~~~l~~l~~-------------   79 (326)
T 2x7f_A           22 PAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGD---------EEEEIKQEINMLKKYSH-------------   79 (326)
T ss_dssp             CTTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSS---------TTHHHHHHHHHHHHHCC-------------
T ss_pred             CCCcEEEEEEeccCCCEEEEEEEECCCCCeEEEEEEecCcc---------cHHHHHHHHHHHHhccC-------------
Confidence            4578999999999999999999      7899999986531         12467899999999954             


Q ss_pred             ccccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc-----cCCHHHHHHHHHHHHH
Q psy9184         333 ELLKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK-----YRSPNQTYAMILQVVF  407 (562)
Q Consensus       333 ~l~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~-----~l~e~~i~~I~~QIl~  407 (562)
                                  ||||+++++++.....       ....+.+|+||||+.+|++.+.+.     .+++..++.++.||+.
T Consensus        80 ------------h~~i~~~~~~~~~~~~-------~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~  140 (326)
T 2x7f_A           80 ------------HRNIATYYGAFIKKNP-------PGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILR  140 (326)
T ss_dssp             ------------STTBCCEEEEEEECC---------CCCCEEEEEEECCTTEEHHHHHHHSGGGCCCHHHHHHHHHHHHH
T ss_pred             ------------CCCeeeeeeEEeeccC-------ccccceEEEEEEcCCCCcHHHHHHhcccCCCCHHHHHHHHHHHHH
Confidence                        4999999998875220       012458999999999988766653     3889999999999999


Q ss_pred             HHHHHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecC-----CcEEEeecCCCcc
Q psy9184         408 SLAVAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVG-----EKICYYDLSQDEE  482 (562)
Q Consensus       408 aL~yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~-----~g~v~~~l~~~pe  482 (562)
                      ||.|||+ .||+||||||+|||++.++                    .+||+|||+++....     ....++..|++||
T Consensus       141 ~l~~lH~-~~ivH~dlkp~NIl~~~~~--------------------~~kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE  199 (326)
T 2x7f_A          141 GLSHLHQ-HKVIHRDIKGQNVLLTENA--------------------EVKLVDFGVSAQLDRTVGRRNTFIGTPYWMAPE  199 (326)
T ss_dssp             HHHHHHH-TTCCCCCCSGGGEEECTTC--------------------CEEECCCTTTC-------------CCGGGCCHH
T ss_pred             HHHHHHH-CCccccCCcHHHEEEcCCC--------------------CEEEeeCcCceecCcCccccccccCCccccChh
Confidence            9999999 7999999999999998876                    799999999987543     2345577899999


Q ss_pred             ccCC------CCCcHHHHHHHhhcccCCCCCCCCCCChhhhHHHHHHHHhhcccCCCCCCCchhHHHHHHHHHHHhcCCC
Q psy9184         483 LFEG------EGDYQFDMYRMMRKQCQNNWQNFTPKNNVFWIHYLVDKATCLKKGYQYLRAPRHQAFELLEELGQNALHF  556 (562)
Q Consensus       483 lF~g------~~~~q~dIy~lm~~~~~~~W~~~~P~tn~~wl~yl~~~Ll~~~~~~~~~~~~~~~~~~~l~~l~~~~l~~  556 (562)
                      ++.+      ......|||++.-... ..+.+..|+........+.. +.. . ..+...  ....-..+.+|...+|..
T Consensus       200 ~~~~~~~~~~~~~~~~Di~slG~il~-~l~~g~~p~~~~~~~~~~~~-~~~-~-~~~~~~--~~~~~~~l~~li~~~l~~  273 (326)
T 2x7f_A          200 VIACDENPDATYDFKSDLWSLGITAI-EMAEGAPPLCDMHPMRALFL-IPR-N-PAPRLK--SKKWSKKFQSFIESCLVK  273 (326)
T ss_dssp             HHC--------CCTTHHHHHHHHHHH-HHHHSSCTTTTSCHHHHHHH-HHH-S-CCCCCS--CSCSCHHHHHHHHHHCCS
T ss_pred             hhccccccCcCCCccchHHHHHHHHH-HHHhCCCCCCCCcHHHHHHH-hhc-C-ccccCC--ccccCHHHHHHHHHHhcc
Confidence            8863      3455689988643333 33334444433222222211 111 1 111110  001124677778888887


Q ss_pred             cCcCC
Q psy9184         557 DSCYE  561 (562)
Q Consensus       557 ~s~~~  561 (562)
                      +...|
T Consensus       274 dp~~R  278 (326)
T 2x7f_A          274 NHSQR  278 (326)
T ss_dssp             SGGGS
T ss_pred             ChhhC
Confidence            76655

>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A

Probab=99.93  E-value=3.7e-26  Score=229.10  Aligned_cols=231  Identities=17%  Similarity=0.129  Sum_probs=150.2

Q ss_pred             CCCCCceeeeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCccc
Q psy9184         259 PSSALKNCKKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFT  332 (562)
Q Consensus       259 ~~~~y~~~~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv  332 (562)
                      ..++|++.+.||+|+||.||+|      +.||+|++....      ........+..+...++.+.|             
T Consensus         5 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~------~~~~~~~~~~~~~~~~~~~~h-------------   65 (290)
T 3fme_A            5 KADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATV------NSQEQKRLLMDLDISMRTVDC-------------   65 (290)
T ss_dssp             CGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEC---------CHHHHHHHHHHHHHHHTTCCC-------------
T ss_pred             cHHhhhhHHhcCCCCCeEEEEEEecCCCeEEEEEEeeccc------CcHHHHHHHHHHHHHHHhCCC-------------
Confidence            3467999999999999999999      789999997643      122223334444555667776             


Q ss_pred             ccccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCcccc-------ccCCHHHHHHHHHHH
Q psy9184         333 ELLKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDI-------KYRSPNQTYAMILQV  405 (562)
Q Consensus       333 ~l~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l-------~~l~e~~i~~I~~QI  405 (562)
                                   |||+++++++.+             ++..|+||||++| ++.+.+       ..+++..++.++.||
T Consensus        66 -------------~~iv~~~~~~~~-------------~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~~~~i~~qi  118 (290)
T 3fme_A           66 -------------PFTVTFYGALFR-------------EGDVWICMELMDT-SLDKFYKQVIDKGQTIPEDILGKIAVSI  118 (290)
T ss_dssp             -------------TTBCCEEEEEEC-------------SSSEEEEEECCSE-EHHHHHHHHHHTTCCCCHHHHHHHHHHH
T ss_pred             -------------CeEEEEeeeeec-------------cCCEEEEEehhcc-chHHHHHHHHhcCCCCCHHHHHHHHHHH
Confidence                         999999999875             5589999999984 454433       248999999999999


Q ss_pred             HHHHHHHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecCC----cEEEeecCCCc
Q psy9184         406 VFSLAVAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVGE----KICYYDLSQDE  481 (562)
Q Consensus       406 l~aL~yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~~----g~v~~~l~~~p  481 (562)
                      +.||.|||+.+||+||||||+|||++.++                    .+||+|||+|+.....    ...++..|++|
T Consensus       119 ~~~l~~lH~~~~i~H~dlkp~Nil~~~~~--------------------~~kl~Dfg~~~~~~~~~~~~~~~~t~~y~aP  178 (290)
T 3fme_A          119 VKALEHLHSKLSVIHRDVKPSNVLINALG--------------------QVKMCDFGISGYLVDDVAKDIDAGCKPYMAP  178 (290)
T ss_dssp             HHHHHHHHHHSCCCCCCCSGGGCEECTTC--------------------CEEBCCC---------------CCCCCCSCH
T ss_pred             HHHHHHHhhcCCeecCCCCHHHEEECCCC--------------------CEEEeecCCcccccccccccccCCCccccCh
Confidence            99999999933999999999999999876                    7999999999876542    22456779999


Q ss_pred             cccCC-----CCCcHHHHHHHhhcccCCCCCCCCCCCh-hhhHHHHHHHHhhcccCCCCCCCchhHHHHHHHHHHHhcCC
Q psy9184         482 ELFEG-----EGDYQFDMYRMMRKQCQNNWQNFTPKNN-VFWIHYLVDKATCLKKGYQYLRAPRHQAFELLEELGQNALH  555 (562)
Q Consensus       482 elF~g-----~~~~q~dIy~lm~~~~~~~W~~~~P~tn-~~wl~yl~~~Ll~~~~~~~~~~~~~~~~~~~l~~l~~~~l~  555 (562)
                      |++.+     ......|||++.-... ..+.+..|+.. ..-...+...+..  .......   ...-..+.+|...+|+
T Consensus       179 E~~~~~~~~~~~~~~~Di~slG~il~-~l~~g~~p~~~~~~~~~~~~~~~~~--~~~~~~~---~~~~~~~~~li~~~l~  252 (290)
T 3fme_A          179 ERINPELNQKGYSVKSDIWSLGITMI-ELAILRFPYDSWGTPFQQLKQVVEE--PSPQLPA---DKFSAEFVDFTSQCLK  252 (290)
T ss_dssp             HHHSCCTTC--CCHHHHHHHHHHHHH-HHHHTSCSSCCCSCHHHHHHHHHHS--CCCCCCT---TTSCHHHHHHHHHHTC
T ss_pred             hhcChhhcCcCCCcHHHHHHHHHHHH-HHHHCCCCccccCchHHHHHHHhcc--CCCCccc---ccCCHHHHHHHHHHhh
Confidence            98632     3455699988644333 22233334321 1112222222222  1111111   1123457778888888


Q ss_pred             CcCcCC
Q psy9184         556 FDSCYE  561 (562)
Q Consensus       556 ~~s~~~  561 (562)
                      ++...|
T Consensus       253 ~~p~~R  258 (290)
T 3fme_A          253 KNSKER  258 (290)
T ss_dssp             SSGGGS
T ss_pred             cChhhC
Confidence            887665

>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=99.93  E-value=3.4e-26  Score=226.58  Aligned_cols=171  Identities=22%  Similarity=0.238  Sum_probs=142.1

Q ss_pred             CCCCceeeeeeccCceEEEEE-----eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCccccc
Q psy9184         260 SSALKNCKKIGEGVYGEVFKL-----NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTEL  334 (562)
Q Consensus       260 ~~~y~~~~~LG~GsfG~Vyka-----~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~l  334 (562)
                      .++|++.+.||+|+||.||+|     ..||+|++.....         ..+.+.+|+.+++.++|               
T Consensus         7 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vaiK~~~~~~~---------~~~~~~~e~~~l~~l~h---------------   62 (267)
T 3t9t_A            7 PSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAM---------SEEDFIEEAEVMMKLSH---------------   62 (267)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTTB---------CHHHHHHHHHHHHTCCC---------------
T ss_pred             hhheeeeeEecCCCceeEEEEEecCCCeEEEEEccccCC---------CHHHHHHHHHHHHhCCC---------------
Confidence            467999999999999999999     6899999986531         12567899999999988               


Q ss_pred             ccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc----cCCHHHHHHHHHHHHHHHH
Q psy9184         335 LKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK----YRSPNQTYAMILQVVFSLA  410 (562)
Q Consensus       335 ~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~----~l~e~~i~~I~~QIl~aL~  410 (562)
                                 |||+++++++.+             ++..|+||||+++|++.+.+.    .+++..++.++.||+.||.
T Consensus        63 -----------~~i~~~~~~~~~-------------~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~  118 (267)
T 3t9t_A           63 -----------PKLVQLYGVCLE-------------QAPICLVTEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMA  118 (267)
T ss_dssp             -----------TTBCCEEEEECS-------------SSSCEEEECCCTTCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHH
T ss_pred             -----------CCEeeEEEEEcc-------------CCCeEEEEeCCCCCcHHHHHhhCcccCCHHHHHHHHHHHHHHHH
Confidence                       999999998875             457899999999998766653    3889999999999999999


Q ss_pred             HHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecC------CcEEEeecCCCcccc
Q psy9184         411 VAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVG------EKICYYDLSQDEELF  484 (562)
Q Consensus       411 yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~------~g~v~~~l~~~pelF  484 (562)
                      |||+ .||+||||||+|||++.++                    .++|+|||+++....      .+..++..|++||++
T Consensus       119 ~lH~-~~i~H~dl~p~Nili~~~~--------------------~~kl~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~  177 (267)
T 3t9t_A          119 YLEE-ACVIHRDLAARNCLVGENQ--------------------VIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVF  177 (267)
T ss_dssp             HHHH-TTCCCSSCCGGGEEECGGG--------------------CEEECCTTGGGGBCCHHHHSTTSTTCCGGGCCHHHH
T ss_pred             HHHh-CCcccCCCchheEEECCCC--------------------CEEEcccccccccccccccccccccccccccChhhh
Confidence            9999 7999999999999998876                    799999999986543      223335568899988


Q ss_pred             CC-CCCcHHHHHHHhh
Q psy9184         485 EG-EGDYQFDMYRMMR  499 (562)
Q Consensus       485 ~g-~~~~q~dIy~lm~  499 (562)
                      .+ ......|||++.-
T Consensus       178 ~~~~~~~~~Di~slG~  193 (267)
T 3t9t_A          178 SFSRYSSKSDVWSFGV  193 (267)
T ss_dssp             HHCCCCHHHHHHHHHH
T ss_pred             cCCCccchhchhhhHH
Confidence            75 4556699988643

>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A

Probab=99.93  E-value=1.1e-26  Score=253.97  Aligned_cols=171  Identities=24%  Similarity=0.274  Sum_probs=142.7

Q ss_pred             CCCCCceeeeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCccc
Q psy9184         259 PSSALKNCKKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFT  332 (562)
Q Consensus       259 ~~~~y~~~~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv  332 (562)
                      ...+|++.++||+|+||.||+|      ..||||+++...         ...+.+.+|+.+|+.++|             
T Consensus       218 ~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~---------~~~~~~~~E~~~l~~l~h-------------  275 (495)
T 1opk_A          218 ERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT---------MEVEEFLKEAAVMKEIKH-------------  275 (495)
T ss_dssp             CGGGEEEEEESGGGTTSSEEEEEEGGGTEEEEEEECCSSS---------SCHHHHHHHHHHHHHCCC-------------
T ss_pred             CHHHceeeeEecCCCCeEEEEEEEcCCCeEEEEEEecCcc---------cchHHHHHHHHHHHhcCC-------------
Confidence            3467899999999999999999      689999997543         123578899999999998             


Q ss_pred             ccccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc-----cCCHHHHHHHHHHHHH
Q psy9184         333 ELLKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK-----YRSPNQTYAMILQVVF  407 (562)
Q Consensus       333 ~l~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~-----~l~e~~i~~I~~QIl~  407 (562)
                                   |||+++++++..             ++.+|+||||+.+|++.+.+.     .+++..+..++.||+.
T Consensus       276 -------------pniv~l~~~~~~-------------~~~~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~i~~qi~~  329 (495)
T 1opk_A          276 -------------PNLVQLLGVCTR-------------EPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISS  329 (495)
T ss_dssp             -------------TTBCCEEEEECS-------------SSSCEEEEECCTTCBHHHHHHHSCTTTSCHHHHHHHHHHHHH
T ss_pred             -------------CCEeeEEEEEec-------------CCcEEEEEEccCCCCHHHHHHhcCcCCCCHHHHHHHHHHHHH
Confidence                         999999998875             457899999999998877664     3889999999999999


Q ss_pred             HHHHHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecC------CcEEEeecCCCc
Q psy9184         408 SLAVAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVG------EKICYYDLSQDE  481 (562)
Q Consensus       408 aL~yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~------~g~v~~~l~~~p  481 (562)
                      ||.|||+ .+|+||||||+|||++.++                    .+||+|||+|+....      .+..++..|++|
T Consensus       330 ~L~~LH~-~~ivHrDlkp~NIll~~~~--------------------~~kl~DFG~a~~~~~~~~~~~~~~~~~~~y~aP  388 (495)
T 1opk_A          330 AMEYLEK-KNFIHRNLAARNCLVGENH--------------------LVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAP  388 (495)
T ss_dssp             HHHHHHH-TTEECSCCSGGGEEECGGG--------------------CEEECCTTCEECCTTCCEECCTTCCCCGGGCCH
T ss_pred             HHHHHHh-CCcccCCCChhhEEECCCC--------------------cEEEeecccceeccCCceeecCCCcCCcceeCH
Confidence            9999999 7999999999999998876                    799999999997653      222334568999


Q ss_pred             cccCC-CCCcHHHHHHHh
Q psy9184         482 ELFEG-EGDYQFDMYRMM  498 (562)
Q Consensus       482 elF~g-~~~~q~dIy~lm  498 (562)
                      |++.+ ..+...|||++.
T Consensus       389 E~~~~~~~~~~sDvwSlG  406 (495)
T 1opk_A          389 ESLAYNKFSIKSDVWAFG  406 (495)
T ss_dssp             HHHHHCEECHHHHHHHHH
T ss_pred             hHHhcCCCCcHHhHHhHH
Confidence            98875 345669998853

>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7

Probab=99.93  E-value=1.1e-25  Score=230.47  Aligned_cols=171  Identities=19%  Similarity=0.274  Sum_probs=135.1

Q ss_pred             CCCceeeeeeccCceEEEEE----eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhc--CCccccCCCCCCccccc
Q psy9184         261 SALKNCKKIGEGVYGEVFKL----NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKET--SDLQYRTENSTPCFTEL  334 (562)
Q Consensus       261 ~~y~~~~~LG~GsfG~Vyka----~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L--~h~~~~~~n~~p~fv~l  334 (562)
                      ++|++.+.||+|+||.||+|    +.||||++....        .   ....+|..++..+  +|               
T Consensus        37 ~~y~~~~~lg~G~~g~V~~~~~~~~~vavK~~~~~~--------~---~~~~~e~~~~~~~~~~h---------------   90 (337)
T 3mdy_A           37 KQIQMVKQIGKGRYGEVWMGKWRGEKVAVKVFFTTE--------E---ASWFRETEIYQTVLMRH---------------   90 (337)
T ss_dssp             HHCEEEEEEEEETTEEEEEEEETTEEEEEEEEEGGG--------H---HHHHHHHHHHTSTTCCC---------------
T ss_pred             cceEEEeEeecCCCeEEEEEEECCceEEEEEEeccc--------c---chhhhHHHHHHHHhhcC---------------
Confidence            46899999999999999999    899999997432        1   2344566655544  55               


Q ss_pred             ccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc--cCCHHHHHHHHHHHHHHHHHH
Q psy9184         335 LKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK--YRSPNQTYAMILQVVFSLAVA  412 (562)
Q Consensus       335 ~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~--~l~e~~i~~I~~QIl~aL~yL  412 (562)
                                 |||+++++++.....         ....+|+||||+.+|++.+.+.  .+++..++.++.||+.||.||
T Consensus        91 -----------~~i~~~~~~~~~~~~---------~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~i~~~i~~~l~~l  150 (337)
T 3mdy_A           91 -----------ENILGFIAADIKGTG---------SWTQLYLITDYHENGSLYDYLKSTTLDAKSMLKLAYSSVSGLCHL  150 (337)
T ss_dssp             -----------TTBCCEEEEEEESCG---------GGCEEEEEECCCTTCBHHHHHHHCCBCHHHHHHHHHHHHHHHHHH
T ss_pred             -----------CCeeeEEEEEccCCC---------CCCceEEEEeccCCCcHHHHhhccCCCHHHHHHHHHHHHHHHHHH
Confidence                       999999988765210         1257999999999998877664  489999999999999999999


Q ss_pred             HhhC--------CeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecCC---------cEEEe
Q psy9184         413 EVEL--------EFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVGE---------KICYY  475 (562)
Q Consensus       413 H~~~--------~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~~---------g~v~~  475 (562)
                      |+ .        ||+||||||+|||++.++                    .+||+|||+|+.....         ...++
T Consensus       151 H~-~~~~~~~~~~ivH~Dikp~Nill~~~~--------------------~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt  209 (337)
T 3mdy_A          151 HT-EIFSTQGKPAIAHRDLKSKNILVKKNG--------------------TCCIADLGLAVKFISDTNEVDIPPNTRVGT  209 (337)
T ss_dssp             HS-CBCSTTCBCCEECSCCCGGGEEECTTS--------------------CEEECCCTTCEECC---------CCSSCSC
T ss_pred             HH-hhhhhccCCCEEecccchHHEEECCCC--------------------CEEEEeCCCceeeccccccccCCCCCCccC
Confidence            99 6        999999999999999876                    7999999999876432         23457


Q ss_pred             ecCCCccccCCCCC-c------HHHHHHHh
Q psy9184         476 DLSQDEELFEGEGD-Y------QFDMYRMM  498 (562)
Q Consensus       476 ~l~~~pelF~g~~~-~------q~dIy~lm  498 (562)
                      ..|++||++.+... .      ..|||++.
T Consensus       210 ~~y~aPE~~~~~~~~~~~~~~~~~DiwslG  239 (337)
T 3mdy_A          210 KRYMPPEVLDESLNRNHFQSYIMADMYSFG  239 (337)
T ss_dssp             GGGCCHHHHTTCCCTTCTHHHHHHHHHHHH
T ss_pred             cceeChhhcccccCCccccCccccchHHHH
Confidence            78999999877422 2      27998854

>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A

Probab=99.93  E-value=6.7e-26  Score=227.52  Aligned_cols=221  Identities=15%  Similarity=0.134  Sum_probs=157.3

Q ss_pred             CCCCceeeeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCcccc
Q psy9184         260 SSALKNCKKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTE  333 (562)
Q Consensus       260 ~~~y~~~~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~  333 (562)
                      .++|++.+.||+|+||.||+|      +.||||++.....          ...+.+|+.+++.+.|              
T Consensus         8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~----------~~~~~~e~~~l~~l~~--------------   63 (296)
T 4hgt_A            8 GNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK----------HPQLHIESKIYKMMQG--------------   63 (296)
T ss_dssp             ---CEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEC-------------CCCHHHHHHHHHHHTT--------------
T ss_pred             CCceEEeeeecCCCCeEEEEEEEcCCCceEEEEeeccccc----------chHHHHHHHHHHHhcC--------------
Confidence            367999999999999999999      7999998775431          1246789999999998              


Q ss_pred             cccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc----cCCHHHHHHHHHHHHHHH
Q psy9184         334 LLKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK----YRSPNQTYAMILQVVFSL  409 (562)
Q Consensus       334 l~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~----~l~e~~i~~I~~QIl~aL  409 (562)
                                  ++++..+..+..            ..+..++||||+ +|++.+.+.    .+++.+++.++.||+.||
T Consensus        64 ------------~~~i~~~~~~~~------------~~~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l  118 (296)
T 4hgt_A           64 ------------GVGIPTIRWCGA------------EGDYNVMVMELL-GPSLEDLFNFCSRKFSLKTVLLLADQMISRI  118 (296)
T ss_dssp             ------------STTCCCEEEEEE------------ETTEEEEEEECC-CCBHHHHHHHTTSCCCHHHHHHHHHHHHHHH
T ss_pred             ------------CCCCCeeeeecC------------CCCceEEEEEcc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHH
Confidence                        444444433322            255889999999 787766654    489999999999999999


Q ss_pred             HHHHhhCCeEeccCCCCCEEE---ccCCCCCcccccCCcccccccCCceEEEEeccceeeecCC------------cEEE
Q psy9184         410 AVAEVELEFEHRDLHMSNILV---LQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVGE------------KICY  474 (562)
Q Consensus       410 ~yLH~~~~IiHRDLKpeNILl---~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~~------------g~v~  474 (562)
                      .|||+ .||+||||||+|||+   +..+                    .+||+|||+|+.....            ...+
T Consensus       119 ~~LH~-~~ivH~Dlkp~NIl~~~~~~~~--------------------~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~g  177 (296)
T 4hgt_A          119 EYIHS-KNFIHRDVKPDNFLMGLGKKGN--------------------LVYIIDFGLAKKYRDARTHQHIPYRENKNLTG  177 (296)
T ss_dssp             HHHHH-TTEECSCCSGGGEEECCGGGTT--------------------CEEECCCTTCEECBCTTTCCBCCCCCSCCCCS
T ss_pred             HHHHH-CCeecCCCCHHHeeeeccCCCC--------------------eEEEecCccceeccCcccCccCCCCcccccCC
Confidence            99999 799999999999999   4444                    7999999999976542            2345


Q ss_pred             eecCCCccccCCC-CCcHHHHHHHhhccc-----CCCCCCCCCCCh-----------------------hhhHHHHHHHH
Q psy9184         475 YDLSQDEELFEGE-GDYQFDMYRMMRKQC-----QNNWQNFTPKNN-----------------------VFWIHYLVDKA  525 (562)
Q Consensus       475 ~~l~~~pelF~g~-~~~q~dIy~lm~~~~-----~~~W~~~~P~tn-----------------------~~wl~yl~~~L  525 (562)
                      +..|++||++.+. .....|||++.-...     ...|....+...                       ...+..++..|
T Consensus       178 t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~  257 (296)
T 4hgt_A          178 TARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVLCKGYPSEFATYLNFC  257 (296)
T ss_dssp             CGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHHHHHSCHHHHTTTSCHHHHHHHHHH
T ss_pred             CccccchHHhcCCCCCchhHHHHHHHHHHHHhcCCCCCcccchhhhhhhhhhhhcccccchhhhhhccCCHHHHHHHHHH
Confidence            7788999988874 556699988643332     122332211100                       12356666777


Q ss_pred             hhcccCCCCCCCchhHHHHHHHHHHHhc
Q psy9184         526 TCLKKGYQYLRAPRHQAFELLEELGQNA  553 (562)
Q Consensus       526 l~~~~~~~~~~~~~~~~~~~l~~l~~~~  553 (562)
                      +.   .-+..|+...+.++.|+++.+..
T Consensus       258 l~---~~p~~Rpt~~~l~~~l~~~~~~~  282 (296)
T 4hgt_A          258 RS---LRFDDKPDYSYLRQLFRNLFHRQ  282 (296)
T ss_dssp             HT---SCTTCCCCHHHHHHHHHHHHHHH
T ss_pred             Hh---cCCCCCCCHHHHHHHHHHHHHHh
Confidence            76   34455555666677777766654

>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*

Probab=99.93  E-value=4.8e-26  Score=228.11  Aligned_cols=172  Identities=22%  Similarity=0.230  Sum_probs=140.3

Q ss_pred             CCCCCceeeeeeccCceEEEEE---------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCC
Q psy9184         259 PSSALKNCKKIGEGVYGEVFKL---------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTP  329 (562)
Q Consensus       259 ~~~~y~~~~~LG~GsfG~Vyka---------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p  329 (562)
                      ..++|.+.+.||+|+||.||+|         ..||+|++....       .....+.+.+|+.+++.++|          
T Consensus        10 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~-------~~~~~~~~~~E~~~l~~l~h----------   72 (281)
T 3cc6_A           10 AREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDC-------TLDNKEKFMSEAVIMKNLDH----------   72 (281)
T ss_dssp             CGGGEEEEEEEEECSSSEEEEEEEECTTCCEEEEEEEECCTTS-------CHHHHHHHHHHHHHHHHHCC----------
T ss_pred             cccceEEEEEEEecCCeeEEEeEEcCCCCCcceEEEEeccccc-------CchHHHHHHHHHHHHHhCCC----------
Confidence            3467999999999999999999         249999998653       23445778999999999998          


Q ss_pred             cccccccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc----cCCHHHHHHHHHHH
Q psy9184         330 CFTELLKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK----YRSPNQTYAMILQV  405 (562)
Q Consensus       330 ~fv~l~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~----~l~e~~i~~I~~QI  405 (562)
                                      |||+++++++.+              +..|+||||+.+|++.+.+.    .+++..++.++.||
T Consensus        73 ----------------~~i~~~~~~~~~--------------~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i  122 (281)
T 3cc6_A           73 ----------------PHIVKLIGIIEE--------------EPTWIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQI  122 (281)
T ss_dssp             ----------------TTBCCEEEEECS--------------SSCEEEEECCTTCBHHHHHHHHTTTCCHHHHHHHHHHH
T ss_pred             ----------------CCcceEEEEEcC--------------CCCEEEEecCCCCCHHHHHHhccccCCHHHHHHHHHHH
Confidence                            999999988753              35689999999998766663    38999999999999


Q ss_pred             HHHHHHHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecCC------cEEEeecCC
Q psy9184         406 VFSLAVAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVGE------KICYYDLSQ  479 (562)
Q Consensus       406 l~aL~yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~~------g~v~~~l~~  479 (562)
                      +.||.|||+ .||+||||||+|||++.++                    .+||+|||+++.....      ....+..|+
T Consensus       123 ~~~l~~lH~-~~i~H~dlkp~Nil~~~~~--------------------~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~y~  181 (281)
T 3cc6_A          123 CKAMAYLES-INCVHRDIAVRNILVASPE--------------------CVKLGDFGLSRYIEDEDYYKASVTRLPIKWM  181 (281)
T ss_dssp             HHHHHHHHH-TTCCCCCCSGGGEEEEETT--------------------EEEECCCCGGGCC---------CCCCCGGGC
T ss_pred             HHHHHHHHH-CCcccCCCccceEEECCCC--------------------cEEeCccCCCcccccccccccccCCCCccee
Confidence            999999999 7999999999999999886                    7999999999876432      122245689


Q ss_pred             CccccCC-CCCcHHHHHHHh
Q psy9184         480 DEELFEG-EGDYQFDMYRMM  498 (562)
Q Consensus       480 ~pelF~g-~~~~q~dIy~lm  498 (562)
                      +||++.+ ..+...|||++.
T Consensus       182 aPE~~~~~~~~~~~Di~slG  201 (281)
T 3cc6_A          182 SPESINFRRFTTASDVWMFA  201 (281)
T ss_dssp             CHHHHHHCCCCHHHHHHHHH
T ss_pred             CchhhccCCCCchhccHHHH
Confidence            9998865 456668998863

>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=99.93  E-value=9.9e-26  Score=226.83  Aligned_cols=172  Identities=18%  Similarity=0.235  Sum_probs=140.9

Q ss_pred             CCCCceee-eeeccCceEEEEE--------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCc
Q psy9184         260 SSALKNCK-KIGEGVYGEVFKL--------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPC  330 (562)
Q Consensus       260 ~~~y~~~~-~LG~GsfG~Vyka--------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~  330 (562)
                      .++|.+.. .||+|+||.||+|        ..||+|++....       .....+.+.+|+.+++.++|           
T Consensus         8 ~~~~~i~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~-------~~~~~~~~~~E~~~l~~l~h-----------   69 (287)
T 1u59_A            8 RDNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGT-------EKADTEEMMREAQIMHQLDN-----------   69 (287)
T ss_dssp             GGGEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSSC-------CHHHHHHHHHHHHHHHHCCC-----------
T ss_pred             HHHhhhhhccccccCceeEEEeEeccCCCcceEEEEecCCcc-------chhHHHHHHHHHHHHHhCCC-----------
Confidence            35677776 9999999999998        469999998643       24455788999999999988           


Q ss_pred             ccccccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc----cCCHHHHHHHHHHHH
Q psy9184         331 FTELLKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK----YRSPNQTYAMILQVV  406 (562)
Q Consensus       331 fv~l~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~----~l~e~~i~~I~~QIl  406 (562)
                                     |||+++++++.              .+..|+||||+.+|++.+.+.    .+++..++.++.||+
T Consensus        70 ---------------~~i~~~~~~~~--------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~  120 (287)
T 1u59_A           70 ---------------PYIVRLIGVCQ--------------AEALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVS  120 (287)
T ss_dssp             ---------------TTBCCEEEEEE--------------SSSEEEEEECCTTEEHHHHHTTCTTTSCHHHHHHHHHHHH
T ss_pred             ---------------CCEeEEEEEec--------------CCCcEEEEEeCCCCCHHHHHHhCCccCCHHHHHHHHHHHH
Confidence                           99999999884              346899999999987766553    389999999999999


Q ss_pred             HHHHHHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecCCcE--------EEeecC
Q psy9184         407 FSLAVAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVGEKI--------CYYDLS  478 (562)
Q Consensus       407 ~aL~yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~~g~--------v~~~l~  478 (562)
                      .||.|||+ .||+||||||+|||++.++                    .++|+|||+++.......        .++..|
T Consensus       121 ~~l~~lH~-~~i~H~dlkp~Nili~~~~--------------------~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y  179 (287)
T 1u59_A          121 MGMKYLEE-KNFVHRDLAARNVLLVNRH--------------------YAKISDFGLSKALGADDSYYTARSAGKWPLKW  179 (287)
T ss_dssp             HHHHHHHH-TTEECCCCSGGGEEEEETT--------------------EEEECCCTTCEECTTCSCEECCCCSSCCCGGG
T ss_pred             HHHHHHHH-CCEeeCCCchheEEEcCCC--------------------CEEECcccceeeeccCcceeeccccccccccc
Confidence            99999999 7999999999999999886                    799999999998754221        124568


Q ss_pred             CCccccCC-CCCcHHHHHHHhh
Q psy9184         479 QDEELFEG-EGDYQFDMYRMMR  499 (562)
Q Consensus       479 ~~pelF~g-~~~~q~dIy~lm~  499 (562)
                      ++||++.+ ..+...|||++.-
T Consensus       180 ~aPE~~~~~~~~~~~Di~slG~  201 (287)
T 1u59_A          180 YAPECINFRKFSSRSDVWSYGV  201 (287)
T ss_dssp             CCHHHHHHCEECHHHHHHHHHH
T ss_pred             cCHHHhccCCCCchhhHHHHHH
Confidence            89998875 3456689988633

>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}

Probab=99.93  E-value=4e-26  Score=230.76  Aligned_cols=230  Identities=14%  Similarity=0.143  Sum_probs=161.9

Q ss_pred             CCCceeeeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCccccc
Q psy9184         261 SALKNCKKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTEL  334 (562)
Q Consensus       261 ~~y~~~~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~l  334 (562)
                      ++|++.+.||+|+||.||+|      ..||+|++.....    .........+.+|+.+++.++|               
T Consensus         5 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~----~~~~~~~~~~~~E~~~l~~l~h---------------   65 (305)
T 2wtk_C            5 GKYLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKL----RRIPNGEANVKKEIQLLRRLRH---------------   65 (305)
T ss_dssp             CCBCCCCEEEECSSCEEEEEEBTTTCCEEEEEEECHHHH----HHSTTHHHHHHHHHHHHTTCCC---------------
T ss_pred             cceeEeeEEecCCCeEEEEEEECCCCcEEEEEEeccccc----cccchhHHHHHHHHHHHHhcCC---------------
Confidence            67999999999999999999      7899999985420    0112334678999999999998               


Q ss_pred             ccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc-----cCCHHHHHHHHHHHHHHH
Q psy9184         335 LKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK-----YRSPNQTYAMILQVVFSL  409 (562)
Q Consensus       335 ~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~-----~l~e~~i~~I~~QIl~aL  409 (562)
                                 |||+++++++...           .....|+||||+.+| +.+.+.     .+++.+++.++.||+.||
T Consensus        66 -----------~~i~~~~~~~~~~-----------~~~~~~lv~e~~~~~-l~~~~~~~~~~~~~~~~~~~~~~qi~~al  122 (305)
T 2wtk_C           66 -----------KNVIQLVDVLYNE-----------EKQKMYMVMEYCVCG-MQEMLDSVPEKRFPVCQAHGYFCQLIDGL  122 (305)
T ss_dssp             -----------TTBCCEEEEEECC--------------CEEEEEECCSEE-HHHHHHHSTTCSCCHHHHHHHHHHHHHHH
T ss_pred             -----------CCeeEEEEEEEcC-----------CCCeEEEEehhccCC-HHHHHHhCcccccCHHHHHHHHHHHHHHH
Confidence                       9999999987532           145789999999977 433332     388999999999999999


Q ss_pred             HHHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecC-------CcEEEeecCCCcc
Q psy9184         410 AVAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVG-------EKICYYDLSQDEE  482 (562)
Q Consensus       410 ~yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~-------~g~v~~~l~~~pe  482 (562)
                      .|||+ .||+||||||+|||++.++                    .++|+|||+++....       ....++..|++||
T Consensus       123 ~~LH~-~~i~H~dlkp~NIl~~~~~--------------------~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE  181 (305)
T 2wtk_C          123 EYLHS-QGIVHKDIKPGNLLLTTGG--------------------TLKISALGVAEALHPFAADDTCRTSQGSPAFQPPE  181 (305)
T ss_dssp             HHHHH-TTEECSCCSGGGEEECTTC--------------------CEEECCCTTCEECCTTCSSCEECCCCSCGGGCCHH
T ss_pred             HHHHH-CCeeecCCCcccEEEcCCC--------------------cEEeeccccccccCccccccccccCCCCCCCcChh
Confidence            99999 7999999999999999876                    799999999987643       1233577889999


Q ss_pred             ccCCCC---CcHHHHHHHhhcccCCCCCCCCCCChhhhHHHHHHHHhhcccCCCCCCCchhHHHHHHHHHHHhcCCCcCc
Q psy9184         483 LFEGEG---DYQFDMYRMMRKQCQNNWQNFTPKNNVFWIHYLVDKATCLKKGYQYLRAPRHQAFELLEELGQNALHFDSC  559 (562)
Q Consensus       483 lF~g~~---~~q~dIy~lm~~~~~~~W~~~~P~tn~~wl~yl~~~Ll~~~~~~~~~~~~~~~~~~~l~~l~~~~l~~~s~  559 (562)
                      ++.+..   ....|||++.-... ..+.+..|+.... ..-+...+......++..      .-..+.+|.+.+|.++..
T Consensus       182 ~~~~~~~~~~~~~Di~slG~il~-~l~~g~~p~~~~~-~~~~~~~i~~~~~~~~~~------~~~~l~~li~~~l~~dp~  253 (305)
T 2wtk_C          182 IANGLDTFSGFKVDIWSAGVTLY-NITTGLYPFEGDN-IYKLFENIGKGSYAIPGD------CGPPLSDLLKGMLEYEPA  253 (305)
T ss_dssp             HHTCCSCEESHHHHHHHHHHHHH-HHHHSSCSCCCSS-HHHHHHHHHHCCCCCCSS------SCHHHHHHHHHHTCSSTT
T ss_pred             hccCcccCCcchhhHHHHHHHHH-HHHhCCCCCCCch-HHHHHHHHhcCCCCCCCc------cCHHHHHHHHHHccCChh
Confidence            988743   45699988643332 2233344443222 111222222211112111      123566677778877766


Q ss_pred             CC
Q psy9184         560 YE  561 (562)
Q Consensus       560 ~~  561 (562)
                      .|
T Consensus       254 ~R  255 (305)
T 2wtk_C          254 KR  255 (305)
T ss_dssp             TS
T ss_pred             hC
Confidence            55

>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}

Probab=99.93  E-value=8.3e-26  Score=229.69  Aligned_cols=228  Identities=16%  Similarity=0.252  Sum_probs=160.3

Q ss_pred             CCCCCceeeeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCccc
Q psy9184         259 PSSALKNCKKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFT  332 (562)
Q Consensus       259 ~~~~y~~~~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv  332 (562)
                      +.++|++.+.||+|+||.||+|      +.||+|++....          ..+.+.+|+.+++.+.|             
T Consensus        27 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~----------~~~~~~~e~~~l~~l~h-------------   83 (314)
T 3com_A           27 PEEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVES----------DLQEIIKEISIMQQCDS-------------   83 (314)
T ss_dssp             ---CEEEEEECC----CEEEEEEETTTCCEEEEEEEETTS----------CCHHHHHHHHHHHTCCC-------------
T ss_pred             chhhhhhheeeccCCCeEEEEEEECCCCCEEEEEecCchH----------HHHHHHHHHHHHHhCCC-------------
Confidence            4478999999999999999999      789999998642          12467899999999988             


Q ss_pred             ccccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc----cCCHHHHHHHHHHHHHH
Q psy9184         333 ELLKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK----YRSPNQTYAMILQVVFS  408 (562)
Q Consensus       333 ~l~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~----~l~e~~i~~I~~QIl~a  408 (562)
                                   |||+++++++..             ++.+|+||||+.+|++.+.+.    .+++.+++.++.||+.|
T Consensus        84 -------------~~i~~~~~~~~~-------------~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~  137 (314)
T 3com_A           84 -------------PHVVKYYGSYFK-------------NTDLWIVMEYCGAGSVSDIIRLRNKTLTEDEIATILQSTLKG  137 (314)
T ss_dssp             -------------TTBCCEEEEEEE-------------TTEEEEEEECCTTEEHHHHHHHHTCCCCHHHHHHHHHHHHHH
T ss_pred             -------------CCCccEEEEEEe-------------CCEEEEEeecCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHH
Confidence                         999999998875             558999999999887766553    48999999999999999


Q ss_pred             HHHHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecC-----CcEEEeecCCCccc
Q psy9184         409 LAVAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVG-----EKICYYDLSQDEEL  483 (562)
Q Consensus       409 L~yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~-----~g~v~~~l~~~pel  483 (562)
                      |.|||+ .||+||||||+|||++.++                    .++|+|||+++....     ....++..|.+||+
T Consensus       138 l~~lH~-~~i~H~dl~p~Nil~~~~~--------------------~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~  196 (314)
T 3com_A          138 LEYLHF-MRKIHRDIKAGNILLNTEG--------------------HAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEV  196 (314)
T ss_dssp             HHHHHH-TTEECCCCSGGGEEECTTC--------------------CEEECCCTTCEECBTTBSCBCCCCSCGGGCCHHH
T ss_pred             HHHHHh-CCCcCCCcCHHHEEECCCC--------------------CEEEeecccchhhhhhccccCccCCCCCccChhh
Confidence            999999 7999999999999999886                    799999999987654     23345677899998


Q ss_pred             cCCC-CCcHHHHHHHhhcccCCCCCCCCCCChhhhHHHHHHHHhhcccCCCCCCCchhHHHHHHHHHHHhcCCCcCcCC
Q psy9184         484 FEGE-GDYQFDMYRMMRKQCQNNWQNFTPKNNVFWIHYLVDKATCLKKGYQYLRAPRHQAFELLEELGQNALHFDSCYE  561 (562)
Q Consensus       484 F~g~-~~~q~dIy~lm~~~~~~~W~~~~P~tn~~wl~yl~~~Ll~~~~~~~~~~~~~~~~~~~l~~l~~~~l~~~s~~~  561 (562)
                      +.+. .....|||++.-... ..+.+..|+........+.. +.. ..  ..........-..+.+|...+|..+...|
T Consensus       197 ~~~~~~~~~~Di~slG~il~-~l~~g~~p~~~~~~~~~~~~-~~~-~~--~~~~~~~~~~~~~l~~li~~~l~~dp~~R  270 (314)
T 3com_A          197 IQEIGYNCVADIWSLGITAI-EMAEGKPPYADIHPMRAIFM-IPT-NP--PPTFRKPELWSDNFTDFVKQCLVKSPEQR  270 (314)
T ss_dssp             HSSSCBCTTHHHHHHHHHHH-HHHHSSCTTTTSCHHHHHHH-HHH-SC--CCCCSSGGGSCHHHHHHHHHHTCSCTTTS
T ss_pred             cCCCCCCccccHHHHHHHHH-HHHhCCCCCCCCChHHHHHH-Hhc-CC--CcccCCcccCCHHHHHHHHHHccCChhhC
Confidence            8774 455689988643332 23333344432221221111 111 11  11100111113456777788887776654

>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7

Probab=99.93  E-value=4.2e-26  Score=240.53  Aligned_cols=171  Identities=17%  Similarity=0.191  Sum_probs=132.4

Q ss_pred             CCceeeeeeccCceEEEEE---------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCccc
Q psy9184         262 ALKNCKKIGEGVYGEVFKL---------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFT  332 (562)
Q Consensus       262 ~y~~~~~LG~GsfG~Vyka---------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv  332 (562)
                      .|.+.+.||+|+||.||+|         ..||+|.+....       .....+.+.+|+.+++.++|             
T Consensus        90 ~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~-------~~~~~~~~~~E~~il~~l~h-------------  149 (373)
T 3c1x_A           90 IVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRIT-------DIGEVSQFLTEGIIMKDFSH-------------  149 (373)
T ss_dssp             EEEEEEEEECCSSSEEEEEEEEETTTEEEEEEEEECCSCS-------CSHHHHHHHHHHTTSTTCCC-------------
T ss_pred             eeecCcEeeeCCCeEEEEEEEECCCCcEEEEEEEEcCCCC-------CHHHHHHHHHHHHHHHhCCC-------------
Confidence            4778899999999999999         358999987532       23445788999999999988             


Q ss_pred             ccccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc----cCCHHHHHHHHHHHHHH
Q psy9184         333 ELLKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK----YRSPNQTYAMILQVVFS  408 (562)
Q Consensus       333 ~l~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~----~l~e~~i~~I~~QIl~a  408 (562)
                                   |||+++++++..            .++..|+||||+.+|++.+.+.    .+++.++..++.||+.|
T Consensus       150 -------------pnIv~~~~~~~~------------~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~a  204 (373)
T 3c1x_A          150 -------------PNVLSLLGICLR------------SEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKG  204 (373)
T ss_dssp             -------------TTBCCCCEEECC------------CSSCCEEEEECCTTCBHHHHHHCTTCCCBHHHHHHHHHHHHHH
T ss_pred             -------------CCcceEEEEEEc------------CCCCeEEEEECCCCCCHHHHHhhcccCCCHHHHHHHHHHHHHH
Confidence                         999999987643            2447899999999998877664    37889999999999999


Q ss_pred             HHHHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecC---------CcEEEeecCC
Q psy9184         409 LAVAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVG---------EKICYYDLSQ  479 (562)
Q Consensus       409 L~yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~---------~g~v~~~l~~  479 (562)
                      |.|||+ .||+||||||+|||++.++                    .+||+|||+|+....         .+..++..|+
T Consensus       205 L~~LH~-~~ivHrDlkp~NIll~~~~--------------------~~kL~DFG~a~~~~~~~~~~~~~~~~~~~~~~y~  263 (373)
T 3c1x_A          205 MKFLAS-KKFVHRDLAARNCMLDEKF--------------------TVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWM  263 (373)
T ss_dssp             HHHHHH-TTCCCSCCCGGGEEECTTC--------------------CEEECCC---------------------CCGGGS
T ss_pred             HHHHHH-CCEecCccchheEEECCCC--------------------CEEEeeccccccccccccccccccCCCCCccccc
Confidence            999999 7999999999999998876                    799999999986543         2233345689


Q ss_pred             CccccCC-CCCcHHHHHHHh
Q psy9184         480 DEELFEG-EGDYQFDMYRMM  498 (562)
Q Consensus       480 ~pelF~g-~~~~q~dIy~lm  498 (562)
                      +||.+.+ ..+...|||++.
T Consensus       264 aPE~~~~~~~~~~~DvwSlG  283 (373)
T 3c1x_A          264 ALESLQTQKFTTKSDVWSFG  283 (373)
T ss_dssp             CHHHHHHCCCCHHHHHHHHH
T ss_pred             ChHHhcCCCCCcHHHHHHHH
Confidence            9998865 456679998863

>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...

Probab=99.93  E-value=4.9e-26  Score=245.67  Aligned_cols=171  Identities=23%  Similarity=0.292  Sum_probs=138.6

Q ss_pred             CCCCCceeeeeeccCceEEEEE-----eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCcccc
Q psy9184         259 PSSALKNCKKIGEGVYGEVFKL-----NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTE  333 (562)
Q Consensus       259 ~~~~y~~~~~LG~GsfG~Vyka-----~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~  333 (562)
                      +.++|++.++||+|+||.||+|     ..||||+++...         ...+.+.+|+.+|+.++|              
T Consensus       182 ~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~---------~~~~~~~~E~~~l~~l~h--------------  238 (452)
T 1fmk_A          182 PRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT---------MSPEAFLQEAQVMKKLRH--------------  238 (452)
T ss_dssp             CGGGEEEEEEEEECSSCEEEEEEETTTEEEEEEECCTTS---------SCHHHHHHHHHHHHHCCC--------------
T ss_pred             ChhHceeeeeecCCCCeEEEEEEECCCceEEEEEeccCC---------CCHHHHHHHHHHHHhCCC--------------
Confidence            4467899999999999999999     679999998643         112568899999999998              


Q ss_pred             cccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc-----cCCHHHHHHHHHHHHHH
Q psy9184         334 LLKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK-----YRSPNQTYAMILQVVFS  408 (562)
Q Consensus       334 l~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~-----~l~e~~i~~I~~QIl~a  408 (562)
                                  |||+++++++.+              +.+|+||||+.+|++.+.+.     .+++.++..++.||+.|
T Consensus       239 ------------p~iv~~~~~~~~--------------~~~~iv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~  292 (452)
T 1fmk_A          239 ------------EKLVQLYAVVSE--------------EPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASG  292 (452)
T ss_dssp             ------------TTBCCEEEEECS--------------SSCEEEECCCTTCBHHHHHSHHHHTTCCHHHHHHHHHHHHHH
T ss_pred             ------------CCEeeEEEEEcC--------------CceEEEehhhcCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHH
Confidence                        999999988752              46899999999998877764     38999999999999999


Q ss_pred             HHHHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecC------CcEEEeecCCCcc
Q psy9184         409 LAVAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVG------EKICYYDLSQDEE  482 (562)
Q Consensus       409 L~yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~------~g~v~~~l~~~pe  482 (562)
                      |+|||+ .+|+||||||+|||++.++                    .+||+|||+|+....      .+..++..|++||
T Consensus       293 l~~LH~-~~ivHrDlkp~Nill~~~~--------------------~~kl~DfG~a~~~~~~~~~~~~~~~~~~~y~aPE  351 (452)
T 1fmk_A          293 MAYVER-MNYVHRDLRAANILVGENL--------------------VCKVADFGLARLIEDNEYTARQGAKFPIKWTAPE  351 (452)
T ss_dssp             HHHHHH-TTCCCSCCSGGGEEECGGG--------------------CEEECCCCTTC--------------CCGGGSCHH
T ss_pred             HHHHHh-CCeeCCCCChhhEEECCCC--------------------CEEECCCccceecCCCceecccCCcccccccCHh
Confidence            999999 7999999999999998775                    799999999987643      2233345689999


Q ss_pred             ccCC-CCCcHHHHHHHhh
Q psy9184         483 LFEG-EGDYQFDMYRMMR  499 (562)
Q Consensus       483 lF~g-~~~~q~dIy~lm~  499 (562)
                      .+.+ ..+...|||++.-
T Consensus       352 ~~~~~~~~~~sDvwslG~  369 (452)
T 1fmk_A          352 AALYGRFTIKSDVWSFGI  369 (452)
T ss_dssp             HHHHCCCCHHHHHHHHHH
T ss_pred             HHhcCCCCccccHHhHHH
Confidence            8764 4566799988643

>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}

Probab=99.93  E-value=3.8e-26  Score=234.41  Aligned_cols=174  Identities=21%  Similarity=0.238  Sum_probs=134.1

Q ss_pred             CCCCCceeeeeeccCceEEEEE----eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHH--HHhcCCccccCCCCCCccc
Q psy9184         259 PSSALKNCKKIGEGVYGEVFKL----NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMV--TKETSDLQYRTENSTPCFT  332 (562)
Q Consensus       259 ~~~~y~~~~~LG~GsfG~Vyka----~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~i--lk~L~h~~~~~~n~~p~fv  332 (562)
                      ..++|++.+.||+|+||.||+|    +.||||++....        .   ..+..|..+  +..++|             
T Consensus        11 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~vavK~~~~~~--------~---~~~~~e~~~~~~~~~~h-------------   66 (336)
T 3g2f_A           11 DLDNLKLLELIGRGRYGAVYKGSLDERPVAVKVFSFAN--------R---QNFINEKNIYRVPLMEH-------------   66 (336)
T ss_dssp             CTTSEEEEEEEEECSSEEEEEEEETTEEEEEEEEEGGG--------H---HHHHHHHHHHTSTTCCC-------------
T ss_pred             ChHHhheeeecccCCCeEEEEEEECCeEEEEEEeeccc--------h---hhHHHHHHHHHHHhccC-------------
Confidence            3478999999999999999999    899999998542        1   233334444  444666             


Q ss_pred             ccccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc--cCCHHHHHHHHHHHHHHHH
Q psy9184         333 ELLKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK--YRSPNQTYAMILQVVFSLA  410 (562)
Q Consensus       333 ~l~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~--~l~e~~i~~I~~QIl~aL~  410 (562)
                                   |||+++++.+....        ......+|+|||||++|++.+.+.  ..++..++.++.||+.||.
T Consensus        67 -------------~~i~~~~~~~~~~~--------~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~i~~qi~~~L~  125 (336)
T 3g2f_A           67 -------------DNIARFIVGDERVT--------ADGRMEYLLVMEYYPNGSLXKYLSLHTSDWVSSCRLAHSVTRGLA  125 (336)
T ss_dssp             -------------TTBCCEEEEEEEEC--------TTSCEEEEEEECCCTTCBHHHHHHHCCBCHHHHHHHHHHHHHHHH
T ss_pred             -------------cchhhheecccccc--------cCCCceEEEEEecCCCCcHHHHHhhcccchhHHHHHHHHHHHHHH
Confidence                         89999887543211        112446899999999998877664  3788999999999999999


Q ss_pred             HHHhhC---------CeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecCC-----------
Q psy9184         411 VAEVEL---------EFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVGE-----------  470 (562)
Q Consensus       411 yLH~~~---------~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~~-----------  470 (562)
                      |||+ .         ||+||||||+|||++.++                    .+||+|||+|+.....           
T Consensus       126 ~LH~-~~~~~~~~~~~ivH~Dikp~Nill~~~~--------------------~~kL~DFG~a~~~~~~~~~~~~~~~~~  184 (336)
T 3g2f_A          126 YLHT-ELPRGDHYKPAISHRDLNSRNVLVKNDG--------------------TCVISDFGLSMRLTGNRLVRPGEEDNA  184 (336)
T ss_dssp             HHHC-CBCCGGGCBCCEECSSCSGGGEEECTTS--------------------CEEECCCTTCEECSSSSCC--------
T ss_pred             HHHh-hhccccccccceeecccccceEEEcCCC--------------------cEEEeeccceeecccccccCccccccc
Confidence            9999 7         999999999999999876                    7999999999876431           


Q ss_pred             --cEEEeecCCCccccCCCC--------CcHHHHHHHh
Q psy9184         471 --KICYYDLSQDEELFEGEG--------DYQFDMYRMM  498 (562)
Q Consensus       471 --g~v~~~l~~~pelF~g~~--------~~q~dIy~lm  498 (562)
                        ...++..|++||++.+..        ....|||++.
T Consensus       185 ~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG  222 (336)
T 3g2f_A          185 AISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALG  222 (336)
T ss_dssp             -CCTTSCGGGCCHHHHTTCCCGGGHHHHHHHHHHHHHH
T ss_pred             cccCCCccceeCchhhcCCcccccccccccccchHHHH
Confidence              223577899999998732        2347998753

>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}

Probab=99.93  E-value=9.5e-26  Score=234.12  Aligned_cols=191  Identities=15%  Similarity=0.194  Sum_probs=145.2

Q ss_pred             CCCceeeeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCccccc
Q psy9184         261 SALKNCKKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTEL  334 (562)
Q Consensus       261 ~~y~~~~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~l  334 (562)
                      .+|.+.+.||+|+||.||+|      +.||||++....      ........+.+|+.+++.++|               
T Consensus        24 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~------~~~~~~~~~~~E~~~l~~l~h---------------   82 (353)
T 3coi_A           24 KTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPF------QSEIFAKRAYRELLLLKHMQH---------------   82 (353)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEESSTT------SSHHHHHHHHHHHHHHHHCCC---------------
T ss_pred             ceEEEeeeEecCCCeEEEEEEECCCCCEEEEEEecccc------cchHHHHHHHHHHHHHHhcCC---------------
Confidence            67999999999999999999      799999997642      223445678899999999998               


Q ss_pred             ccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc-cCCHHHHHHHHHHHHHHHHHHH
Q psy9184         335 LKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK-YRSPNQTYAMILQVVFSLAVAE  413 (562)
Q Consensus       335 ~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~-~l~e~~i~~I~~QIl~aL~yLH  413 (562)
                                 |||+++++++....       ........|+||||+. |++.+.+. .+++.+++.++.||+.||.|||
T Consensus        83 -----------~~iv~~~~~~~~~~-------~~~~~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH  143 (353)
T 3coi_A           83 -----------ENVIGLLDVFTPAS-------SLRNFYDFYLVMPFMQ-TDLQKIMGLKFSEEKIQYLVYQMLKGLKYIH  143 (353)
T ss_dssp             -----------TTBCCCSEEECSCS-------SGGGCCCCEEEEECCS-EEGGGTTTSCCCHHHHHHHHHHHHHHHHHHH
T ss_pred             -----------CCcccHhheEeccc-------ccccceeEEEEecccc-CCHHHHhcCCCCHHHHHHHHHHHHHHHHHHH
Confidence                       89999888886521       0011234699999997 55555443 4899999999999999999999


Q ss_pred             hhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecC--CcEEEeecCCCccccCC--CCC
Q psy9184         414 VELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVG--EKICYYDLSQDEELFEG--EGD  489 (562)
Q Consensus       414 ~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~--~g~v~~~l~~~pelF~g--~~~  489 (562)
                      + .||+||||||+|||++.++                    .+||+|||+++....  .+..++..|++||++.+  ..+
T Consensus       144 ~-~~ivH~dlkp~NIl~~~~~--------------------~~kl~Dfg~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~  202 (353)
T 3coi_A          144 S-AGVVHRDLKPGNLAVNEDC--------------------ELKILDFGLARHADAEMTGYVVTRWYRAPEVILSWMHYN  202 (353)
T ss_dssp             H-TTCCCSSCCGGGEEECTTC--------------------CEEECSTTCTTC--------CCSBCCSCHHHHSCCSCCC
T ss_pred             H-CCcccCCCCHHHEeECCCC--------------------cEEEeecccccCCCCCccccccCcCcCCHHHHhCcCCCC
Confidence            9 7999999999999999886                    799999999987653  23455778999998876  345


Q ss_pred             cHHHHHHHhhcccCCCCCCCCCCC
Q psy9184         490 YQFDMYRMMRKQCQNNWQNFTPKN  513 (562)
Q Consensus       490 ~q~dIy~lm~~~~~~~W~~~~P~t  513 (562)
                      ...|||++.-... ..+.+..|+.
T Consensus       203 ~~~Di~slG~il~-el~~g~~pf~  225 (353)
T 3coi_A          203 QTVDIWSVGCIMA-EMLTGKTLFK  225 (353)
T ss_dssp             TTHHHHHHHHHHH-HHHHSSCSSB
T ss_pred             chhhHHHHHHHHH-HHHhCCCCCC
Confidence            5699988643332 3333444443

>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...

Probab=99.93  E-value=8.6e-26  Score=241.53  Aligned_cols=185  Identities=17%  Similarity=0.137  Sum_probs=140.7

Q ss_pred             CCCceeeeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCccccc
Q psy9184         261 SALKNCKKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTEL  334 (562)
Q Consensus       261 ~~y~~~~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~l  334 (562)
                      .+|++.+.||+|+||.||+|      +.||||++....            ....+|+.+++.++|               
T Consensus        54 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~vaiK~~~~~~------------~~~~~E~~il~~l~h---------------  106 (420)
T 1j1b_A           54 VSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDK------------RFKNRELQIMRKLDH---------------  106 (420)
T ss_dssp             EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECCT------------TSCCHHHHHHHTCCC---------------
T ss_pred             ceEEeeeEEeeCCCEEEEEEEECCCCcEEEEEEecccc------------hhHHHHHHHHHHcCC---------------
Confidence            45899999999999999999      789999997543            112369999999998               


Q ss_pred             ccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCcccc-------ccCCHHHHHHHHHHHHH
Q psy9184         335 LKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDI-------KYRSPNQTYAMILQVVF  407 (562)
Q Consensus       335 ~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l-------~~l~e~~i~~I~~QIl~  407 (562)
                                 |||++++++|......       .....+++||||+.++ +...+       ..+++..++.++.||+.
T Consensus       107 -----------pniv~l~~~~~~~~~~-------~~~~~~~lv~e~~~~~-l~~~~~~~~~~~~~l~~~~~~~~~~qi~~  167 (420)
T 1j1b_A          107 -----------CNIVRLRYFFYSSGEK-------KDEVYLNLVLDYVPET-VYRVARHYSRAKQTLPVIYVKLYMYQLFR  167 (420)
T ss_dssp             -----------TTBCCEEEEEEEEETT-------TTEEEEEEEEECCCEE-HHHHHHHHHHTTCCCCHHHHHHHHHHHHH
T ss_pred             -----------CCccceeeEEeccCCC-------CcceeEEeehhccccc-HHHHHHHHhhccCCCCHHHHHHHHHHHHH
Confidence                       9999998887542200       1123578999999853 43332       24899999999999999


Q ss_pred             HHHHHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecC----CcEEEeecCCCccc
Q psy9184         408 SLAVAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVG----EKICYYDLSQDEEL  483 (562)
Q Consensus       408 aL~yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~----~g~v~~~l~~~pel  483 (562)
                      ||.|||+ .||+||||||+|||++.++.                   .+||+|||+|+....    ...+++..|++||+
T Consensus       168 aL~~LH~-~~ivHrDlkp~NILl~~~~~-------------------~~kl~DFG~a~~~~~~~~~~~~~~t~~y~aPE~  227 (420)
T 1j1b_A          168 SLAYIHS-FGICHRDIKPQNLLLDPDTA-------------------VLKLCDFGSAKQLVRGEPNVSYICSRYYRAPEL  227 (420)
T ss_dssp             HHHHHHT-TTEECSCCSGGGEEEETTTT-------------------EEEECCCTTCEECCTTCCCCSCCSCTTSCCHHH
T ss_pred             HHHHHHH-CCccccCCChhhEEEeCCCC-------------------eEEeccchhhhhcccCCCceeeeeCCCcCCHHH
Confidence            9999999 79999999999999997642                   689999999997643    23445778999998


Q ss_pred             cCCC--CCcHHHHHHHhhcccCCCCCCCCCC
Q psy9184         484 FEGE--GDYQFDMYRMMRKQCQNNWQNFTPK  512 (562)
Q Consensus       484 F~g~--~~~q~dIy~lm~~~~~~~W~~~~P~  512 (562)
                      +.+.  .+...|||++.-. +...+.+..|+
T Consensus       228 ~~~~~~~~~~~DiwSlG~i-l~ell~G~~pf  257 (420)
T 1j1b_A          228 IFGATDYTSSIDVWSAGCV-LAELLLGQPIF  257 (420)
T ss_dssp             HTTCSSCCTHHHHHHHHHH-HHHHHHSSCSS
T ss_pred             HcCCCCCCchhhhHHHHHH-HHHHHhCCCCC
Confidence            8663  5667999886433 33333444454

>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*

Probab=99.93  E-value=6.8e-26  Score=237.28  Aligned_cols=185  Identities=6%  Similarity=0.040  Sum_probs=127.8

Q ss_pred             CCCceeeeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcC--CccccCCCCCCccc
Q psy9184         261 SALKNCKKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETS--DLQYRTENSTPCFT  332 (562)
Q Consensus       261 ~~y~~~~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~--h~~~~~~n~~p~fv  332 (562)
                      ..|++.+.||+|+||.||+|      +.||||++....     .......+.+.+|+.+++.|.  |             
T Consensus        62 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~-----~~~~~~~~~~~~E~~~~~~l~~~h-------------  123 (371)
T 3q60_A           62 RKLKLVEPLRVGDRSVVFLVRDVERLEDFALKVFTMGA-----ENSRSELERLHEATFAAARLLGES-------------  123 (371)
T ss_dssp             EEEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECCS-----TTHHHHHHHHHHHHHHHHHHHC---------------
T ss_pred             eeeeeeeeccCCCCEEEEEEEECCCCceeEEEEEEecc-----cccccHHHHHHHHHHHHHHhcccC-------------
Confidence            35899999999999999999      789999999764     223455567788876666664  5             


Q ss_pred             ccccccccCCCCCCCceeehhhhh-------ccccCC----CCCCCCCCCCeEEEEEEecCCCCCcccccc----CCHHH
Q psy9184         333 ELLKCSCVRGRYPDRLVTLWEEFA-------KTKKSY----NDHPSMFEEDQIFIILELKNGGNDSGDIKY----RSPNQ  397 (562)
Q Consensus       333 ~l~~~~iv~g~~~pnIv~l~~~f~-------~~~~s~----~~~p~~~~~~~l~LVmE~~~gG~ll~~l~~----l~e~~  397 (562)
                                   |||++++..|.       ......    ......+....+|+|||||. |++.+.+..    +++..
T Consensus       124 -------------p~iv~~~~~~~~p~d~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~~~  189 (371)
T 3q60_A          124 -------------PEEARDRRRLLLPSDAVAVQSQPPFAQLSPGQDDYAVANYLLLMPAAS-VDLELLFSTLDFVYVFRG  189 (371)
T ss_dssp             ---------------------CBCCCCEEEEETTSCSSSBCSCC---CCEEEEEEEECCCS-EEHHHHHHHHHHSCCCCH
T ss_pred             -------------hhhhhhceeEEeeehheecCCCCCeeeccCCcccceeeeEEEEecCCC-CCHHHHHHHhccccchhh
Confidence                         66665443332       110000    00000111246899999998 777666642    45555


Q ss_pred             H------HHHHHHHHHHHHHHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecCC-
Q psy9184         398 T------YAMILQVVFSLAVAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVGE-  470 (562)
Q Consensus       398 i------~~I~~QIl~aL~yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~~-  470 (562)
                      .      ..++.||+.||+|||+ .||+||||||+|||++.++                    .+||+|||+|+..... 
T Consensus       190 ~~~~~vk~~i~~qi~~aL~~LH~-~~ivHrDikp~NIll~~~~--------------------~~kL~DFG~a~~~~~~~  248 (371)
T 3q60_A          190 DEGILALHILTAQLIRLAANLQS-KGLVHGHFTPDNLFIMPDG--------------------RLMLGDVSALWKVGTRG  248 (371)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHH-TTEEETTCSGGGEEECTTS--------------------CEEECCGGGEEETTCEE
T ss_pred             hhhhhhHHHHHHHHHHHHHHHHH-CCCccCcCCHHHEEECCCC--------------------CEEEEecceeeecCCCc
Confidence            5      6777999999999999 7999999999999999886                    7999999999976542 


Q ss_pred             -cEEEeecCCCccccCC---CCCcHHHHHHHh
Q psy9184         471 -KICYYDLSQDEELFEG---EGDYQFDMYRMM  498 (562)
Q Consensus       471 -g~v~~~l~~~pelF~g---~~~~q~dIy~lm  498 (562)
                       ....+..|++||++.+   ..+...|||++.
T Consensus       249 ~~~~~t~~y~aPE~~~~~~~~~~~~~DiwSlG  280 (371)
T 3q60_A          249 PASSVPVTYAPREFLNASTATFTHALNAWQLG  280 (371)
T ss_dssp             EGGGSCGGGCCHHHHTCSEEECCHHHHHHHHH
T ss_pred             cCccCCcCCcChhhccCCCCCcCccccHHHHH
Confidence             2233578999999876   356679998854

>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*

Probab=99.93  E-value=5.6e-26  Score=234.28  Aligned_cols=241  Identities=15%  Similarity=0.112  Sum_probs=170.3

Q ss_pred             CCCceeeeeeccCceEEEEE----eeEEEEEeecCCCCCCc---------chhHHHHHHHHHHHHHHHhcCCccccCCCC
Q psy9184         261 SALKNCKKIGEGVYGEVFKL----NNSVIKIMPIEGDQSVN---------GEEQKKFREIFSEIMVTKETSDLQYRTENS  327 (562)
Q Consensus       261 ~~y~~~~~LG~GsfG~Vyka----~~vAIKii~~~~~~~~~---------~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~  327 (562)
                      ++|++.+.||+|+||.||+|    +.||||++.........         .......+.+.+|+.+++.++|        
T Consensus        31 ~~y~~~~~lg~G~~g~V~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h--------  102 (348)
T 2pml_X           31 NDYRIIRTLNQGKFNKIILCEKDNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIKN--------  102 (348)
T ss_dssp             TTEEEEEEEECCSSCCEEEEEETTEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTTCCC--------
T ss_pred             CceEEEEEEcCCCCeEEEEEEcCCceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHhCCC--------
Confidence            68999999999999999999    89999999864210000         0001122678899999999998        


Q ss_pred             CCcccccccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccc------cc-----cCCHH
Q psy9184         328 TPCFTELLKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGD------IK-----YRSPN  396 (562)
Q Consensus       328 ~p~fv~l~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~------l~-----~l~e~  396 (562)
                                        |||+++++++.+             ++.+|+||||++||++.+.      +.     .+++.
T Consensus       103 ------------------~~i~~~~~~~~~-------------~~~~~lv~e~~~~~~L~~~~~~~~~l~~~~~~~~~~~  151 (348)
T 2pml_X          103 ------------------EYCLTCEGIITN-------------YDEVYIIYEYMENDSILKFDEYFFVLDKNYTCFIPIQ  151 (348)
T ss_dssp             ------------------TTBCCCSEEEES-------------SSEEEEEEECCTTCBSSEESSSEESSCSSSCCCCCHH
T ss_pred             ------------------CCcceEEEEEee-------------CCeEEEEEeccCCCcHHHHHHHhhhhhhccccCCCHH
Confidence                              999999998875             5589999999999988776      32     38899


Q ss_pred             HHHHHHHHHHHHHHHHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecC---CcEE
Q psy9184         397 QTYAMILQVVFSLAVAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVG---EKIC  473 (562)
Q Consensus       397 ~i~~I~~QIl~aL~yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~---~g~v  473 (562)
                      .++.++.||+.||.|||+..||+||||||+|||++.++                    .++|+|||+++....   ....
T Consensus       152 ~~~~i~~qi~~~l~~lH~~~~i~H~dl~p~Nil~~~~~--------------------~~kl~dfg~~~~~~~~~~~~~~  211 (348)
T 2pml_X          152 VIKCIIKSVLNSFSYIHNEKNICHRDVKPSNILMDKNG--------------------RVKLSDFGESEYMVDKKIKGSR  211 (348)
T ss_dssp             HHHHHHHHHHHHHHHHHHTSCEECCCCCGGGEEECTTS--------------------CEEECCCTTCEECBTTEECSSC
T ss_pred             HHHHHHHHHHHHHHHHhccCCEeecCCChHhEEEcCCC--------------------cEEEeccccccccccccccCCC
Confidence            99999999999999999834999999999999998886                    799999999987654   2334


Q ss_pred             EeecCCCccccCCCCC--c-HHHHHHHhhcccCCCCCCCCCCChhhhHHHHHHHHhhcccCCCCCCCch-----------
Q psy9184         474 YYDLSQDEELFEGEGD--Y-QFDMYRMMRKQCQNNWQNFTPKNNVFWIHYLVDKATCLKKGYQYLRAPR-----------  539 (562)
Q Consensus       474 ~~~l~~~pelF~g~~~--~-q~dIy~lm~~~~~~~W~~~~P~tn~~wl~yl~~~Ll~~~~~~~~~~~~~-----------  539 (562)
                      ++..|++||++.+...  . ..|||++.-... ..+.+..|+....-...+...+......++......           
T Consensus       212 ~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~-~l~~g~~pf~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~  290 (348)
T 2pml_X          212 GTYEFMPPEFFSNESSYNGAKVDIWSLGICLY-VMFYNVVPFSLKISLVELFNNIRTKNIEYPLDRNHFLYPLTNKKSTC  290 (348)
T ss_dssp             SCGGGCCGGGGSSCCCEEHHHHHHHHHHHHHH-HHHHSSCSSCCSSCSHHHHHHHTSCCCCCCCSSSSSTTTTCC-----
T ss_pred             CCcCccCchhhcCCCCCCcchhhHHHHHHHHH-HHHhCCCCCCCCCcHHHHHHHHhccCcCCccchhhhhcccccccccc
Confidence            5778999999988632  3 689988643332 333344444221111222333333122222110000           


Q ss_pred             --hHHHHHHHHHHHhcCCCcCcCC
Q psy9184         540 --HQAFELLEELGQNALHFDSCYE  561 (562)
Q Consensus       540 --~~~~~~l~~l~~~~l~~~s~~~  561 (562)
                        ...-..+.+|...+|.++...|
T Consensus       291 ~~~~~~~~l~~li~~~L~~dP~~R  314 (348)
T 2pml_X          291 SNNFLSNEDIDFLKLFLRKNPAER  314 (348)
T ss_dssp             ---CCCHHHHHHHHHHCCSSGGGS
T ss_pred             chhhcCHHHHHHHHHHccCChhhC
Confidence              1113467778888888887665

>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}

Probab=99.93  E-value=2.6e-25  Score=226.92  Aligned_cols=169  Identities=19%  Similarity=0.265  Sum_probs=134.9

Q ss_pred             CCCceeeeeeccCceEEEEE----eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCccccccc
Q psy9184         261 SALKNCKKIGEGVYGEVFKL----NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTELLK  336 (562)
Q Consensus       261 ~~y~~~~~LG~GsfG~Vyka----~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~l~~  336 (562)
                      .+|++.+.||+|+||.||+|    +.||+|++...          ...+.+.+|+.+++.++|                 
T Consensus         8 ~~~~~~~~lg~G~~g~V~~~~~~~~~vavK~~~~~----------~~~~~~~~E~~~l~~l~h-----------------   60 (307)
T 2eva_A            8 KEIEVEEVVGRGAFGVVCKAKWRAKDVAIKQIESE----------SERKAFIVELRQLSRVNH-----------------   60 (307)
T ss_dssp             GGEEEEEEEECCSSSEEEEEEETTEEEEEEECSST----------THHHHHHHHHHHHHHCCC-----------------
T ss_pred             hHeeeeeEeecCCCceEEEEEECCeeEEEEEecCh----------hHHHHHHHHHHHHhcCCC-----------------
Confidence            57899999999999999999    89999998643          123578899999999998                 


Q ss_pred             ccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc------cCCHHHHHHHHHHHHHHHH
Q psy9184         337 CSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK------YRSPNQTYAMILQVVFSLA  410 (562)
Q Consensus       337 ~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~------~l~e~~i~~I~~QIl~aL~  410 (562)
                               |||+++++++.+               ..|+||||++||++.+.+.      .+++..+..++.||+.||.
T Consensus        61 ---------p~iv~~~~~~~~---------------~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~  116 (307)
T 2eva_A           61 ---------PNIVKLYGACLN---------------PVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVA  116 (307)
T ss_dssp             ---------TTBCCEEEBCTT---------------TTEEEEECCTTCBHHHHHHCSSSEECCCHHHHHHHHHHHHHHHH
T ss_pred             ---------CCcCeEEEEEcC---------------CcEEEEEcCCCCCHHHHHhccCCCCccCHHHHHHHHHHHHHHHH
Confidence                     999999988753               4799999999998866653      2688999999999999999


Q ss_pred             HHHhh--CCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecC--CcEEEeecCCCccccCC
Q psy9184         411 VAEVE--LEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVG--EKICYYDLSQDEELFEG  486 (562)
Q Consensus       411 yLH~~--~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~--~g~v~~~l~~~pelF~g  486 (562)
                      |||+.  .||+||||||+|||++.++.                   .+||+|||+++....  ....++..|++||++.+
T Consensus       117 ~LH~~~~~~ivH~dlkp~NIll~~~~~-------------------~~kl~Dfg~~~~~~~~~~~~~gt~~y~aPE~~~~  177 (307)
T 2eva_A          117 YLHSMQPKALIHRDLKPPNLLLVAGGT-------------------VLKICDFGTACDIQTHMTNNKGSAAWMAPEVFEG  177 (307)
T ss_dssp             HHHTCSSSCCCCCCCSGGGEEEETTTT-------------------EEEECCCCC------------CCTTSSCHHHHTC
T ss_pred             HHHhCCCCCeecCCCChhHEEEeCCCC-------------------EEEEcccccccccccccccCCCCCceEChhhhCC
Confidence            99992  28999999999999988762                   589999999986543  23346778999999887


Q ss_pred             -CCCcHHHHHHHhh
Q psy9184         487 -EGDYQFDMYRMMR  499 (562)
Q Consensus       487 -~~~~q~dIy~lm~  499 (562)
                       ..+...|||++.-
T Consensus       178 ~~~~~~~Di~slG~  191 (307)
T 2eva_A          178 SNYSEKCDVFSWGI  191 (307)
T ss_dssp             CCCCTHHHHHHHHH
T ss_pred             CCCCcHHHHHHHHH
Confidence             4566799988643

>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*

Probab=99.93  E-value=1.4e-25  Score=226.09  Aligned_cols=172  Identities=18%  Similarity=0.234  Sum_probs=139.3

Q ss_pred             CCCCceee-eeeccCceEEEEE--------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCc
Q psy9184         260 SSALKNCK-KIGEGVYGEVFKL--------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPC  330 (562)
Q Consensus       260 ~~~y~~~~-~LG~GsfG~Vyka--------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~  330 (562)
                      ..+|.+.+ .||+|+||.||+|        +.||||++....      ......+.+.+|+.+++.++|           
T Consensus        15 ~~~y~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~------~~~~~~~~~~~e~~~l~~l~h-----------   77 (291)
T 1xbb_A           15 RKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEA------NDPALKDELLAEANVMQQLDN-----------   77 (291)
T ss_dssp             GGGEEEEEEEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----------CHHHHHHHHHHHHHHTCCC-----------
T ss_pred             chhhhhccCccccccCeeeEeeeecCCCceeeEEEEeecccc------cCHHHHHHHHHHHHHHHhCCC-----------
Confidence            36788888 9999999999998        679999998653      123345678999999999988           


Q ss_pred             ccccccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc---cCCHHHHHHHHHHHHH
Q psy9184         331 FTELLKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK---YRSPNQTYAMILQVVF  407 (562)
Q Consensus       331 fv~l~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~---~l~e~~i~~I~~QIl~  407 (562)
                                     |||+++++++.              .+..|+||||+.+|++.+.+.   .+++.+++.++.||+.
T Consensus        78 ---------------~~i~~~~~~~~--------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~  128 (291)
T 1xbb_A           78 ---------------PYIVRMIGICE--------------AESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSM  128 (291)
T ss_dssp             ---------------TTBCCEEEEEE--------------SSSEEEEEECCTTEEHHHHHHHCTTCCHHHHHHHHHHHHH
T ss_pred             ---------------CCEEEEEEEEC--------------CCCcEEEEEeCCCCCHHHHHHhCcCCCHHHHHHHHHHHHH
Confidence                           99999998883              347899999999987766654   3899999999999999


Q ss_pred             HHHHHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecCCcE--------EEeecCC
Q psy9184         408 SLAVAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVGEKI--------CYYDLSQ  479 (562)
Q Consensus       408 aL~yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~~g~--------v~~~l~~  479 (562)
                      ||.|||+ .||+||||||+|||++.++                    .+||+|||+++.......        .++..|+
T Consensus       129 ~l~~LH~-~~i~H~dikp~Nil~~~~~--------------------~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~  187 (291)
T 1xbb_A          129 GMKYLEE-SNFVHRDLAARNVLLVTQH--------------------YAKISDFGLSKALRADENYYKAQTHGKWPVKWY  187 (291)
T ss_dssp             HHHHHHH-TTEECSCCSGGGEEEEETT--------------------EEEECCCTTCEECCTTCSEEEC----CCCGGGC
T ss_pred             HHHHHHh-CCeEcCCCCcceEEEeCCC--------------------cEEEccCCcceeeccCCCcccccccCCCCceee
Confidence            9999999 7999999999999999886                    799999999987754221        1234588


Q ss_pred             CccccCCC-CCcHHHHHHHh
Q psy9184         480 DEELFEGE-GDYQFDMYRMM  498 (562)
Q Consensus       480 ~pelF~g~-~~~q~dIy~lm  498 (562)
                      +||.+.+. .+...|||++.
T Consensus       188 aPE~~~~~~~~~~~Di~slG  207 (291)
T 1xbb_A          188 APECINYYKFSSKSDVWSFG  207 (291)
T ss_dssp             CHHHHHHCEEEHHHHHHHHH
T ss_pred             ChHHhccCCCChhhhHHHHH
Confidence            99988663 35568998863

>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*

Probab=99.93  E-value=4e-25  Score=227.27  Aligned_cols=207  Identities=17%  Similarity=0.158  Sum_probs=147.5

Q ss_pred             CCCCceeeeeeccCceEEEEE-------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCccc
Q psy9184         260 SSALKNCKKIGEGVYGEVFKL-------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFT  332 (562)
Q Consensus       260 ~~~y~~~~~LG~GsfG~Vyka-------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv  332 (562)
                      .++|++.+.||+|+||.||+|       ..||+|++...         ....+.+.+|+.+++.+.|...          
T Consensus        18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~---------~~~~~~~~~E~~~l~~l~~~~~----------   78 (355)
T 2eu9_A           18 QERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNV---------GKYREAARLEINVLKKIKEKDK----------   78 (355)
T ss_dssp             TTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSC---------HHHHHHHHHHHHHHHHHHHHCT----------
T ss_pred             cccEEEEEEeeccCCeEEEEEEecCCCceEEEEEEEccc---------ccchhHHHHHHHHHHHHhhcCC----------
Confidence            368999999999999999999       57999999743         2334677889999999987211          


Q ss_pred             ccccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc-----cCCHHHHHHHHHHHHH
Q psy9184         333 ELLKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK-----YRSPNQTYAMILQVVF  407 (562)
Q Consensus       333 ~l~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~-----~l~e~~i~~I~~QIl~  407 (562)
                                ..+++++.+++++..             .+.+|+||||+ +|.+++.+.     .+++.+++.++.||+.
T Consensus        79 ----------~~~~~~~~~~~~~~~-------------~~~~~lv~e~~-~~~l~~~l~~~~~~~~~~~~~~~i~~qi~~  134 (355)
T 2eu9_A           79 ----------ENKFLCVLMSDWFNF-------------HGHMCIAFELL-GKNTFEFLKENNFQPYPLPHVRHMAYQLCH  134 (355)
T ss_dssp             ----------TSCSCBCCEEEEEEE-------------TTEEEEEEECC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHH
T ss_pred             ----------CCceeEEEeeeeeee-------------CCeEEEEEecc-CCChHHHHHhccCCCCCHHHHHHHHHHHHH
Confidence                      012457888887765             55899999999 566766553     3889999999999999


Q ss_pred             HHHHHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecC--CcEEEeecCCCccccC
Q psy9184         408 SLAVAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVG--EKICYYDLSQDEELFE  485 (562)
Q Consensus       408 aL~yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~--~g~v~~~l~~~pelF~  485 (562)
                      ||.|||+ .||+||||||+|||+...+.... +...............+||+|||+|+....  ....++..|++||++.
T Consensus       135 ~L~~lH~-~~ivH~Dlkp~NIll~~~~~~~~-~~~~~~~~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~gt~~y~aPE~~~  212 (355)
T 2eu9_A          135 ALRFLHE-NQLTHTDLKPENILFVNSEFETL-YNEHKSCEEKSVKNTSIRVADFGSATFDHEHHTTIVATRHYRPPEVIL  212 (355)
T ss_dssp             HHHHHHT-TTEECCCCCGGGEEESCCCEEEE-ECCC-CCCEEEESCCCEEECCCTTCEETTSCCCSSCSCGGGCCHHHHT
T ss_pred             HHHHHHH-CCcccCCCCHHHEEEeccccccc-ccccccccccccCCCcEEEeecCccccccccccCCcCCCcccCCeeee
Confidence            9999999 79999999999999965421000 000000000111223799999999987554  2345678899999887


Q ss_pred             C-CCCcHHHHHHHhhcccCCCCCCCCCC
Q psy9184         486 G-EGDYQFDMYRMMRKQCQNNWQNFTPK  512 (562)
Q Consensus       486 g-~~~~q~dIy~lm~~~~~~~W~~~~P~  512 (562)
                      + ..+...|||++.-.. ...+.+..|+
T Consensus       213 ~~~~~~~~Di~slG~il-~el~~g~~pf  239 (355)
T 2eu9_A          213 ELGWAQPCDVWSIGCIL-FEYYRGFTLF  239 (355)
T ss_dssp             TCCCCTHHHHHHHHHHH-HHHHHSSCSC
T ss_pred             cCCCCCccchHHHHHHH-HHHHhCCCCC
Confidence            6 456779998864333 2333444454

>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*

Probab=99.93  E-value=3.5e-26  Score=229.39  Aligned_cols=175  Identities=18%  Similarity=0.170  Sum_probs=134.6

Q ss_pred             CCCCCceeeeeeccCceEEEEE---------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCC
Q psy9184         259 PSSALKNCKKIGEGVYGEVFKL---------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTP  329 (562)
Q Consensus       259 ~~~~y~~~~~LG~GsfG~Vyka---------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p  329 (562)
                      ...+|++.+.||+|+||.||+|         ..||+|++....     .......+.+.+|+.+++.++|          
T Consensus        16 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~-----~~~~~~~~~~~~e~~~l~~l~h----------   80 (291)
T 1u46_A           16 GEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDV-----LSQPEAMDDFIREVNAMHSLDH----------   80 (291)
T ss_dssp             CGGGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC-------------CHHHHHHHHHHHHHHHCCC----------
T ss_pred             chhHeeeeeeecCCCceeEEEEEeccCCCceeEEEEEEEccCc-----cCCHHHHHHHHHHHHHHHhCCC----------
Confidence            3467999999999999999999         258999988643     1223455788999999999988          


Q ss_pred             cccccccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc----cCCHHHHHHHHHHH
Q psy9184         330 CFTELLKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK----YRSPNQTYAMILQV  405 (562)
Q Consensus       330 ~fv~l~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~----~l~e~~i~~I~~QI  405 (562)
                                      |||+++++++..              ...++||||+.+|++.+.+.    .+++.++..++.||
T Consensus        81 ----------------~~i~~~~~~~~~--------------~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i  130 (291)
T 1u46_A           81 ----------------RNLIRLYGVVLT--------------PPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQV  130 (291)
T ss_dssp             ----------------TTBCCEEEEECS--------------SSCEEEEECCTTCBHHHHHHHHGGGSCHHHHHHHHHHH
T ss_pred             ----------------CCcccEEEEEcc--------------CCceeeEecccCCCHHHHHHhccCCcCHHHHHHHHHHH
Confidence                            999999998863              24789999999998877664    38999999999999


Q ss_pred             HHHHHHHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecCCc--------EEEeec
Q psy9184         406 VFSLAVAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVGEK--------ICYYDL  477 (562)
Q Consensus       406 l~aL~yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~~g--------~v~~~l  477 (562)
                      +.||.|||+ .||+||||||+|||++.++                    .+||+|||+++......        ...+..
T Consensus       131 ~~~l~~lH~-~~i~H~dikp~Nili~~~~--------------------~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~  189 (291)
T 1u46_A          131 AEGMGYLES-KRFIHRDLAARNLLLATRD--------------------LVKIGDFGLMRALPQNDDHYVMQEHRKVPFA  189 (291)
T ss_dssp             HHHHHHHHH-TTEECSCCCGGGEEEEETT--------------------EEEECCCTTCEECCC-CCEEEC-----CCGG
T ss_pred             HHHHHHHHh-CCcccCCCchheEEEcCCC--------------------CEEEccccccccccccccchhhhccCCCCce
Confidence            999999999 7999999999999999886                    79999999998875422        122345


Q ss_pred             CCCccccCCC-CCcHHHHHHHhh
Q psy9184         478 SQDEELFEGE-GDYQFDMYRMMR  499 (562)
Q Consensus       478 ~~~pelF~g~-~~~q~dIy~lm~  499 (562)
                      |++||++.+. .+...|||++.-
T Consensus       190 y~aPE~~~~~~~~~~~Di~slG~  212 (291)
T 1u46_A          190 WCAPESLKTRTFSHASDTWMFGV  212 (291)
T ss_dssp             GCCHHHHHHCEEEHHHHHHHHHH
T ss_pred             eeCchhhcCCCCCchhhHHHHHH
Confidence            8899988764 455689988643

>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A

Probab=99.93  E-value=3.4e-25  Score=222.69  Aligned_cols=221  Identities=15%  Similarity=0.137  Sum_probs=159.2

Q ss_pred             CCCCceeeeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCcccc
Q psy9184         260 SSALKNCKKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTE  333 (562)
Q Consensus       260 ~~~y~~~~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~  333 (562)
                      .++|++.+.||+|+||.||+|      +.||||++.....          ...+.+|+.+++.+.|              
T Consensus         8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~----------~~~~~~e~~~l~~l~~--------------   63 (296)
T 3uzp_A            8 GNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK----------HPQLHIESKIYKMMQG--------------   63 (296)
T ss_dssp             TTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEESCSS----------CCHHHHHHHHHHHHTT--------------
T ss_pred             ccEEEEEEEEccCCCeEEEEEEEcCCCcEEEEEEecCCcc----------hhHHHHHHHHHHHhhc--------------
Confidence            368999999999999999999      7999999876531          1257889999999998              


Q ss_pred             cccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc----cCCHHHHHHHHHHHHHHH
Q psy9184         334 LLKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK----YRSPNQTYAMILQVVFSL  409 (562)
Q Consensus       334 l~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~----~l~e~~i~~I~~QIl~aL  409 (562)
                                  ++++..+..+..            ..+..|+||||+ +|++.+.+.    .+++.+++.++.||+.||
T Consensus        64 ------------~~~i~~~~~~~~------------~~~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l  118 (296)
T 3uzp_A           64 ------------GVGIPTIRWCGA------------EGDYNVMVMELL-GPSLEDLFNFCSRKFSLKTVLLLADQMISRI  118 (296)
T ss_dssp             ------------STTCCCEEEEEE------------ETTEEEEEEECC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHH
T ss_pred             ------------CCCCCccccccC------------CCCceEEEEEec-CCCHHHHHHhhccCCCHHHHHHHHHHHHHHH
Confidence                        443333333322            245789999999 787766654    489999999999999999


Q ss_pred             HHHHhhCCeEeccCCCCCEEEc---cCCCCCcccccCCcccccccCCceEEEEeccceeeecCC------------cEEE
Q psy9184         410 AVAEVELEFEHRDLHMSNILVL---QTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVGE------------KICY  474 (562)
Q Consensus       410 ~yLH~~~~IiHRDLKpeNILl~---~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~~------------g~v~  474 (562)
                      .|||+ .||+||||||+|||++   .++                    .+||+|||+|+.....            ...+
T Consensus       119 ~~lH~-~~ivH~dlkp~NIl~~~~~~~~--------------------~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~g  177 (296)
T 3uzp_A          119 EYIHS-KNFIHRDVKPDNFLMGLGKKGN--------------------LVYIIDFGLAKKYRDARTHQHIPYRENKNLTG  177 (296)
T ss_dssp             HHHHH-TTEECSCCCGGGEEECCGGGTT--------------------CEEECCCTTCEECBCTTTCCBCCCCCSCCCCS
T ss_pred             HHHHh-CCeeeCCCCHHHeEEecCCCCC--------------------eEEEeeCCCccccccccccccccccccccccc
Confidence            99999 7999999999999995   333                    7999999999876542            3345


Q ss_pred             eecCCCccccCC-CCCcHHHHHHHhhccc-----CCCCCCCCCCC-----------------------hhhhHHHHHHHH
Q psy9184         475 YDLSQDEELFEG-EGDYQFDMYRMMRKQC-----QNNWQNFTPKN-----------------------NVFWIHYLVDKA  525 (562)
Q Consensus       475 ~~l~~~pelF~g-~~~~q~dIy~lm~~~~-----~~~W~~~~P~t-----------------------n~~wl~yl~~~L  525 (562)
                      +..|++||++.+ ..+...|||++.-...     ...|.......                       -...+..++.+|
T Consensus       178 t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~  257 (296)
T 3uzp_A          178 TARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVLCKGYPSEFATYLNFC  257 (296)
T ss_dssp             CTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHHHHHSCHHHHTTTSCHHHHHHHHHH
T ss_pred             ccccCChhhhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCcCchhhhhhhhhhcccccCCchHHHHhhCCHHHHHHHHHH
Confidence            778999999887 4566799988633332     12333221110                       011355566666


Q ss_pred             hhcccCCCCCCCchhHHHHHHHHHHHhc
Q psy9184         526 TCLKKGYQYLRAPRHQAFELLEELGQNA  553 (562)
Q Consensus       526 l~~~~~~~~~~~~~~~~~~~l~~l~~~~  553 (562)
                      +.   .-+..|+...+.++.|+++....
T Consensus       258 l~---~dp~~Rps~~~l~~~l~~~~~~~  282 (296)
T 3uzp_A          258 RS---LRFDDKPDYSYLRQLFRNLFHRQ  282 (296)
T ss_dssp             HT---SCTTCCCCHHHHHHHHHHHHHHT
T ss_pred             Hh---cCcCcCCCHHHHHHHHHHHHHhc
Confidence            66   34455555666677777765554

>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}

Probab=99.93  E-value=5.7e-26  Score=233.24  Aligned_cols=173  Identities=18%  Similarity=0.194  Sum_probs=140.5

Q ss_pred             CCCCceeeeeeccCceEEEEE----------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCC
Q psy9184         260 SSALKNCKKIGEGVYGEVFKL----------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTP  329 (562)
Q Consensus       260 ~~~y~~~~~LG~GsfG~Vyka----------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p  329 (562)
                      ..+|++.+.||+|+||.||+|          +.||+|++....        ....+.+.+|+.+++.++|          
T Consensus        40 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~--------~~~~~~~~~E~~~l~~l~h----------  101 (326)
T 2w1i_A           40 ERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHST--------EEHLRDFEREIEILKSLQH----------  101 (326)
T ss_dssp             GGGEEEEEEEECCSSEEEEEEEECTTSSSCCEEEEEEEESSCC--------SHHHHHHHHHHHHHHTCCC----------
T ss_pred             HHHceeeeeeccCCCeEEEEEEeccccCCCceEEEEEEeccCC--------HHHHHHHHHHHHHHHhCCC----------
Confidence            367999999999999999998          589999997542        3445678999999999988          


Q ss_pred             cccccccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc----cCCHHHHHHHHHHH
Q psy9184         330 CFTELLKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK----YRSPNQTYAMILQV  405 (562)
Q Consensus       330 ~fv~l~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~----~l~e~~i~~I~~QI  405 (562)
                                      |||+++++++....           ...+|+||||+++|++.+.+.    .+++.+++.++.||
T Consensus       102 ----------------~~iv~~~~~~~~~~-----------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi  154 (326)
T 2w1i_A          102 ----------------DNIVKYKGVCYSAG-----------RRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQI  154 (326)
T ss_dssp             ----------------TTBCCEEEEECC---------------CCEEEECCCTTCBHHHHHHHSTTSSCHHHHHHHHHHH
T ss_pred             ----------------CCeeeEEEEEEecC-----------CCceEEEEECCCCCCHHHHHHhcccCCCHHHHHHHHHHH
Confidence                            99999988876421           346899999999998876663    38899999999999


Q ss_pred             HHHHHHHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecCCcE--------EEeec
Q psy9184         406 VFSLAVAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVGEKI--------CYYDL  477 (562)
Q Consensus       406 l~aL~yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~~g~--------v~~~l  477 (562)
                      +.||.|||+ .||+||||||+|||++.++                    .+||+|||+++.......        ..+..
T Consensus       155 ~~aL~~LH~-~~ivH~dikp~NIli~~~~--------------------~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~~  213 (326)
T 2w1i_A          155 CKGMEYLGT-KRYIHRDLATRNILVENEN--------------------RVKIGDFGLTKVLPQDKEYYKVKEPGESPIF  213 (326)
T ss_dssp             HHHHHHHHH-TTEECSCCCGGGEEEEETT--------------------EEEECCCTTCEECCSSCSEEECSSCCSCCGG
T ss_pred             HHHHHHHHh-CCEeccCCCcceEEEcCCC--------------------cEEEecCcchhhccccccccccccCCCCcee
Confidence            999999999 7999999999999999886                    799999999998754221        12345


Q ss_pred             CCCccccCCC-CCcHHHHHHHh
Q psy9184         478 SQDEELFEGE-GDYQFDMYRMM  498 (562)
Q Consensus       478 ~~~pelF~g~-~~~q~dIy~lm  498 (562)
                      |++||.+.+. .+...|||++.
T Consensus       214 y~aPE~~~~~~~~~~~Di~slG  235 (326)
T 2w1i_A          214 WYAPESLTESKFSVASDVWSFG  235 (326)
T ss_dssp             GCCHHHHHHCEEEHHHHHHHHH
T ss_pred             EECchhhcCCCCCchhhHHHHH
Confidence            8899987664 45568998863

>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}

Probab=99.92  E-value=2.9e-25  Score=226.62  Aligned_cols=180  Identities=17%  Similarity=0.202  Sum_probs=130.3

Q ss_pred             CCCCceeeeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCcccc
Q psy9184         260 SSALKNCKKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTE  333 (562)
Q Consensus       260 ~~~y~~~~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~  333 (562)
                      ..+|++.++||+|+||.||+|      +.||||++....        ......+.+|+.+++.+..              
T Consensus        27 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--------~~~~~~~~~e~~~l~~l~~--------------   84 (337)
T 3ll6_A           27 ELRLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNE--------EEKNRAIIQEVCFMKKLSG--------------   84 (337)
T ss_dssp             TEEEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEESS--------HHHHHHHHHHHHHHHHHTT--------------
T ss_pred             CceEEEEEEEccCCceEEEEEEECCCCcEEEEEEecCCc--------hHHHHHHHHHHHHHHHhcc--------------
Confidence            357999999999999999999      689999987542        3445678899999999973              


Q ss_pred             cccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc------cCCHHHHHHHHHHHHH
Q psy9184         334 LLKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK------YRSPNQTYAMILQVVF  407 (562)
Q Consensus       334 l~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~------~l~e~~i~~I~~QIl~  407 (562)
                                 ||||+++++++.....     ........+|+||||+. |++.+.+.      .+++.+++.++.||+.
T Consensus        85 -----------h~~iv~~~~~~~~~~~-----~~~~~~~~~~lv~e~~~-g~L~~~l~~~~~~~~~~~~~~~~i~~qi~~  147 (337)
T 3ll6_A           85 -----------HPNIVQFCSAASIGKE-----ESDTGQAEFLLLTELCK-GQLVEFLKKMESRGPLSCDTVLKIFYQTCR  147 (337)
T ss_dssp             -----------STTBCCEEEEEEECTT-----TSTTSSEEEEEEEECCS-EEHHHHHHHHHTTCSCCHHHHHHHHHHHHH
T ss_pred             -----------CCChhhcccccccccc-----ccccCCceEEEEEEecC-CCHHHHHHHhhccCCCCHHHHHHHHHHHHH
Confidence                       3888888887743110     00112457899999997 66666553      3899999999999999


Q ss_pred             HHHHHHhhCC--eEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecCC---------------
Q psy9184         408 SLAVAEVELE--FEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVGE---------------  470 (562)
Q Consensus       408 aL~yLH~~~~--IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~~---------------  470 (562)
                      ||.|||+ .+  |+||||||+|||++.++                    .+||+|||+++.....               
T Consensus       148 ~l~~LH~-~~~~ivH~Dikp~NIl~~~~~--------------------~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~  206 (337)
T 3ll6_A          148 AVQHMHR-QKPPIIHRDLKVENLLLSNQG--------------------TIKLCDFGSATTISHYPDYSWSAQRRALVEE  206 (337)
T ss_dssp             HHHHHHT-SSSCCBCCCCCGGGCEECTTS--------------------CEEBCCCTTCBCCSSCC--------------
T ss_pred             HHHHHHh-CCCCEEEccCCcccEEECCCC--------------------CEEEecCccceeccccCcccccccccccchh
Confidence            9999999 69  99999999999999886                    7999999999876532               


Q ss_pred             --cEEEeecCCCccccC---C-CCCcHHHHHHHhh
Q psy9184         471 --KICYYDLSQDEELFE---G-EGDYQFDMYRMMR  499 (562)
Q Consensus       471 --g~v~~~l~~~pelF~---g-~~~~q~dIy~lm~  499 (562)
                        ....+..|++||++.   + ....+.|||++.-
T Consensus       207 ~~~~~~t~~y~aPE~~~~~~~~~~~~~~Dv~slG~  241 (337)
T 3ll6_A          207 EITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGC  241 (337)
T ss_dssp             -----------------CCTTSCSSHHHHHHHHHH
T ss_pred             hccccCCCCcCChhhhhccccCCCChHHhHHHHHH
Confidence              233577799999984   2 3455699988643

>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}

Probab=99.92  E-value=1.3e-25  Score=238.08  Aligned_cols=184  Identities=20%  Similarity=0.197  Sum_probs=140.5

Q ss_pred             CCCceeeeeeccCceEEEEE-----eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCcccccc
Q psy9184         261 SALKNCKKIGEGVYGEVFKL-----NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTELL  335 (562)
Q Consensus       261 ~~y~~~~~LG~GsfG~Vyka-----~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~l~  335 (562)
                      .+|.+.+.||+|+||.||+|     ..+|+|.+.....            ...+|+.+++.++|                
T Consensus        40 ~~Y~~~~~lG~G~~g~V~~a~~~~~~~~aikk~~~~~~------------~~~~E~~il~~l~h----------------   91 (394)
T 4e7w_A           40 IAYTNCKVIGNGSFGVVFQAKLVESDEVAIKKVLQDKR------------FKNRELQIMRIVKH----------------   91 (394)
T ss_dssp             EEEEEEEEEEEETTEEEEEEEETTTEEEEEEEEECCTT------------SCCHHHHHHHTCCC----------------
T ss_pred             ceEEEeEEEeeCCCeEEEEEEECCCCeEEEEEEecCcc------------hHHHHHHHHHhCCC----------------
Confidence            46899999999999999999     5699998875431            11369999999998                


Q ss_pred             cccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCcccc-------ccCCHHHHHHHHHHHHHH
Q psy9184         336 KCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDI-------KYRSPNQTYAMILQVVFS  408 (562)
Q Consensus       336 ~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l-------~~l~e~~i~~I~~QIl~a  408 (562)
                                |||++++++|......       .....+|+||||+.++ ++..+       ..+++..++.++.||+.|
T Consensus        92 ----------~niv~l~~~~~~~~~~-------~~~~~~~lv~e~~~~~-l~~~~~~~~~~~~~~~~~~~~~~~~qi~~a  153 (394)
T 4e7w_A           92 ----------PNVVDLKAFFYSNGDK-------KDEVFLNLVLEYVPET-VYRASRHYAKLKQTMPMLLIKLYMYQLLRS  153 (394)
T ss_dssp             ----------TTBCCEEEEEEEESSS-------SSCEEEEEEEECCSEE-HHHHHHHHHHTTSCCCHHHHHHHHHHHHHH
T ss_pred             ----------CCcceEEEEEEecCCC-------CCceEEEEEeeccCcc-HHHHHHHHHhhcCCCCHHHHHHHHHHHHHH
Confidence                      9999999888653210       1233588999999865 33322       248999999999999999


Q ss_pred             HHHHHhhCCeEeccCCCCCEEEc-cCCCCCcccccCCcccccccCCceEEEEeccceeeecC----CcEEEeecCCCccc
Q psy9184         409 LAVAEVELEFEHRDLHMSNILVL-QTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVG----EKICYYDLSQDEEL  483 (562)
Q Consensus       409 L~yLH~~~~IiHRDLKpeNILl~-~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~----~g~v~~~l~~~pel  483 (562)
                      |.|||+ .||+||||||+|||++ .++                    .+||+|||+|+....    ...+.+..|++||+
T Consensus       154 L~~LH~-~~ivHrDlkp~Nill~~~~~--------------------~~kL~DFG~a~~~~~~~~~~~~~~t~~y~aPE~  212 (394)
T 4e7w_A          154 LAYIHS-IGICHRDIKPQNLLLDPPSG--------------------VLKLIDFGSAKILIAGEPNVSYICSRYYRAPEL  212 (394)
T ss_dssp             HHHHHH-TTEECSCCSGGGEEEETTTT--------------------EEEECCCTTCEECCTTCCCCSSCSCGGGCCHHH
T ss_pred             HHHHHH-CCccCCCCCHHHEEEcCCCC--------------------cEEEeeCCCcccccCCCCCcccccCcCccCHHH
Confidence            999999 7999999999999998 454                    899999999987643    23345778999998


Q ss_pred             cCCC--CCcHHHHHHHhhcccCCCCCCCCCC
Q psy9184         484 FEGE--GDYQFDMYRMMRKQCQNNWQNFTPK  512 (562)
Q Consensus       484 F~g~--~~~q~dIy~lm~~~~~~~W~~~~P~  512 (562)
                      +.+.  .....|||++.-.. ...+.+..|+
T Consensus       213 ~~~~~~~~~~~DiwSlG~il-~ell~g~~pf  242 (394)
T 4e7w_A          213 IFGATNYTTNIDIWSTGCVM-AELMQGQPLF  242 (394)
T ss_dssp             HTTCSSCCTHHHHHHHHHHH-HHHHHSSCSS
T ss_pred             HcCCCCCCcHHHHHHHHHHH-HHHHhCCCCC
Confidence            8663  56679998854333 2333444454

>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}

Probab=99.92  E-value=1.6e-25  Score=237.40  Aligned_cols=173  Identities=20%  Similarity=0.279  Sum_probs=127.0

Q ss_pred             Cce-eeeeeccCceEEEEE--------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCcccc
Q psy9184         263 LKN-CKKIGEGVYGEVFKL--------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTE  333 (562)
Q Consensus       263 y~~-~~~LG~GsfG~Vyka--------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~  333 (562)
                      |.+ .++||+|+||.||+|        +.||||++.....          ...+.+|+.+|+.++|              
T Consensus        22 y~~~g~~lG~G~~g~Vy~~~~~~~~~~~~vaiK~~~~~~~----------~~~~~~E~~~l~~l~h--------------   77 (405)
T 3rgf_A           22 FEYEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTGI----------SMSACREIALLRELKH--------------   77 (405)
T ss_dssp             EECSSCCCC-----EEEEEEESSSSCCCCEEEEECSSSSC----------CHHHHHHHHHHHHCCC--------------
T ss_pred             hhhcCcEeeecCCeEEEEEEEccCCCCeEEEEEEECCCCC----------CHHHHHHHHHHHhcCC--------------
Confidence            444 568999999999999        4799999975431          1357789999999998              


Q ss_pred             cccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc------------cCCHHHHHHH
Q psy9184         334 LLKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK------------YRSPNQTYAM  401 (562)
Q Consensus       334 l~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~------------~l~e~~i~~I  401 (562)
                                  |||++++++|...           .+..+|+||||+.| ++++.+.            .+++..++.+
T Consensus        78 ------------pniv~~~~~~~~~-----------~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~l~~~~~~~i  133 (405)
T 3rgf_A           78 ------------PNVISLQKVFLSH-----------ADRKVWLLFDYAEH-DLWHIIKFHRASKANKKPVQLPRGMVKSL  133 (405)
T ss_dssp             ------------TTBCCCCEEEEET-----------TTTEEEEEEECCSE-EHHHHHHHHHHHC-------CCHHHHHHH
T ss_pred             ------------CCeeeEeeEEecC-----------CCCeEEEEEeCCCC-CHHHHHHHhccccccccccCCCHHHHHHH
Confidence                        9999999988542           25589999999974 5655443            2899999999


Q ss_pred             HHHHHHHHHHHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecC--------CcEE
Q psy9184         402 ILQVVFSLAVAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVG--------EKIC  473 (562)
Q Consensus       402 ~~QIl~aL~yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~--------~g~v  473 (562)
                      +.||+.||.|||+ .||+||||||+|||+...+..                ...+||+|||+|+....        ...+
T Consensus       134 ~~qi~~al~~LH~-~~ivH~Dlkp~NIll~~~~~~----------------~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~  196 (405)
T 3rgf_A          134 LYQILDGIHYLHA-NWVLHRDLKPANILVMGEGPE----------------RGRVKIADMGFARLFNSPLKPLADLDPVV  196 (405)
T ss_dssp             HHHHHHHHHHHHH-TTCCCCCCCGGGEEECCSSTT----------------TTCEEECCTTCCC----------------
T ss_pred             HHHHHHHHHHHHh-CCEeCCCcCHHHeEEecCCCC----------------CCcEEEEECCCceecCCCCcccccCCCce
Confidence            9999999999999 799999999999999543210                01799999999987643        2345


Q ss_pred             EeecCCCccccCCC--CCcHHHHHHHhhc
Q psy9184         474 YYDLSQDEELFEGE--GDYQFDMYRMMRK  500 (562)
Q Consensus       474 ~~~l~~~pelF~g~--~~~q~dIy~lm~~  500 (562)
                      ++..|++||++.+.  .....|||++.-.
T Consensus       197 gt~~y~aPE~~~~~~~~~~~~DiwSlG~i  225 (405)
T 3rgf_A          197 VTFWYRAPELLLGARHYTKAIDIWAIGCI  225 (405)
T ss_dssp             CCCTTCCHHHHTTCCSCCHHHHHHHHHHH
T ss_pred             ecCcccCchhhcCCCcccchhhhHHHHHH
Confidence            67889999998873  4566999886433

>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*

Probab=99.92  E-value=6.8e-25  Score=226.59  Aligned_cols=178  Identities=20%  Similarity=0.217  Sum_probs=141.6

Q ss_pred             CCCCceeeeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCcccc
Q psy9184         260 SSALKNCKKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTE  333 (562)
Q Consensus       260 ~~~y~~~~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~  333 (562)
                      .++|++.+.||+|+||.||+|      +.||||++....       .......+.+|+.+++.++|              
T Consensus        10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-------~~~~~~~~~~E~~~l~~l~h--------------   68 (353)
T 2b9h_A           10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFD-------KPLFALRTLREIKILKHFKH--------------   68 (353)
T ss_dssp             CTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCS-------SHHHHHHHHHHHHHHHHCCC--------------
T ss_pred             ccceEEeeEEcCCCCeEEEEEEECCCCcEEEEEeecccc-------cchHHHHHHHHHHHHHhCcC--------------
Confidence            478999999999999999999      789999997432       23445677899999999998              


Q ss_pred             cccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc--cCCHHHHHHHHHHHHHHHHH
Q psy9184         334 LLKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK--YRSPNQTYAMILQVVFSLAV  411 (562)
Q Consensus       334 l~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~--~l~e~~i~~I~~QIl~aL~y  411 (562)
                                  |||+++++++...        ........|+||||+. |++.+.+.  .+++.+++.++.||+.||.|
T Consensus        69 ------------~~iv~~~~~~~~~--------~~~~~~~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~qi~~~L~~  127 (353)
T 2b9h_A           69 ------------ENIITIFNIQRPD--------SFENFNEVYIIQELMQ-TDLHRVISTQMLSDDHIQYFIYQTLRAVKV  127 (353)
T ss_dssp             ------------TTBCCEEEECCCS--------CSTTCCCEEEEECCCS-EEHHHHHHHCCCCHHHHHHHHHHHHHHHHH
T ss_pred             ------------CCcCCeeeeeccc--------ccCccceEEEEEeccC-ccHHHHHhhcCCCHHHHHHHHHHHHHHHHH
Confidence                        8999988876541        1223467999999997 44544443  48999999999999999999


Q ss_pred             HHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecCC---------------cEEEee
Q psy9184         412 AEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVGE---------------KICYYD  476 (562)
Q Consensus       412 LH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~~---------------g~v~~~  476 (562)
                      ||+ .||+||||||+|||++.++                    .+||+|||+|+.....               ..+++.
T Consensus       128 LH~-~~ivH~Dlkp~Nil~~~~~--------------------~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~~~gt~  186 (353)
T 2b9h_A          128 LHG-SNVIHRDLKPSNLLINSNC--------------------DLKVCDFGLARIIDESAADNSEPTGQQSGMVEFVATR  186 (353)
T ss_dssp             HHH-TTEECSCCCGGGEEECTTC--------------------CEEECCCTTCEECC----------------CCCCCCG
T ss_pred             HHH-CCeecCCCCHHHeEEcCCC--------------------cEEEEecccccccccccccccCccccccchhhccccc
Confidence            999 7999999999999998876                    7999999999876531               123467


Q ss_pred             cCCCccccCC--CCCcHHHHHHHhhc
Q psy9184         477 LSQDEELFEG--EGDYQFDMYRMMRK  500 (562)
Q Consensus       477 l~~~pelF~g--~~~~q~dIy~lm~~  500 (562)
                      .|++||++.+  ..+...|||++.-.
T Consensus       187 ~y~aPE~~~~~~~~~~~~Di~slG~i  212 (353)
T 2b9h_A          187 WYRAPEVMLTSAKYSRAMDVWSCGCI  212 (353)
T ss_dssp             GGCCHHHHHSCCCCCHHHHHHHHHHH
T ss_pred             cccCCeeeccCCCccchhhHHHHHHH
Confidence            7999998754  45566999886433

>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7

Probab=99.92  E-value=4.3e-26  Score=251.56  Aligned_cols=172  Identities=23%  Similarity=0.286  Sum_probs=142.1

Q ss_pred             CCCCCceeeeeeccCceEEEEE-----eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCcccc
Q psy9184         259 PSSALKNCKKIGEGVYGEVFKL-----NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTE  333 (562)
Q Consensus       259 ~~~~y~~~~~LG~GsfG~Vyka-----~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~  333 (562)
                      ..++|++.++||+|+||.||+|     ..||||+++...         ...+.+.+|+.+|+.|+|              
T Consensus       265 ~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~---------~~~~~~~~E~~~l~~l~h--------------  321 (535)
T 2h8h_A          265 PRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT---------MSPEAFLQEAQVMKKLRH--------------  321 (535)
T ss_dssp             CGGGEEEEEEEEECSSEEEEEEEETTTEEEEEEEECTTS---------SCHHHHHHHHHHHHHCCC--------------
T ss_pred             chhhhhhheecccCCCeEEEEEEECCCceEEEEEeCCCC---------CCHHHHHHHHHHHHhCCC--------------
Confidence            4467899999999999999999     679999998643         112568899999999998              


Q ss_pred             cccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc-----cCCHHHHHHHHHHHHHH
Q psy9184         334 LLKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK-----YRSPNQTYAMILQVVFS  408 (562)
Q Consensus       334 l~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~-----~l~e~~i~~I~~QIl~a  408 (562)
                                  |||+++++++.+              +.+||||||+.+|++.+.+.     .+++.++..++.||+.|
T Consensus       322 ------------pniv~~~~~~~~--------------~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~  375 (535)
T 2h8h_A          322 ------------EKLVQLYAVVSE--------------EPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASG  375 (535)
T ss_dssp             ------------TTBCCEEEEECS--------------SSCEEEECCCTTEEHHHHHSHHHHTTCCHHHHHHHHHHHHHH
T ss_pred             ------------CCEeeEEEEEee--------------ccceEeeehhcCCcHHHHHhhcCCCCCCHHHHHHHHHHHHHH
Confidence                        999999988752              46899999999998877764     28999999999999999


Q ss_pred             HHHHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecC------CcEEEeecCCCcc
Q psy9184         409 LAVAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVG------EKICYYDLSQDEE  482 (562)
Q Consensus       409 L~yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~------~g~v~~~l~~~pe  482 (562)
                      |.|||+ .+|+||||||+|||++.++                    .+||+|||+++....      .+..++..|++||
T Consensus       376 L~~LH~-~~ivHrDlkp~NIll~~~~--------------------~~kl~DFG~a~~~~~~~~~~~~~~~~~~~y~aPE  434 (535)
T 2h8h_A          376 MAYVER-MNYVHRDLRAANILVGENL--------------------VCKVADFGLARLIEDNEYTARQGAKFPIKWTAPE  434 (535)
T ss_dssp             HHHHHH-TTCCCSCCSGGGEEECGGG--------------------CEEECCTTSTTTCCCHHHHTTCSTTSCGGGSCHH
T ss_pred             HHHHHh-CCeeCCCCCHhhEEEcCCC--------------------cEEEcccccceecCCCceecccCCcCcccccCHH
Confidence            999999 7999999999999998775                    799999999987643      2223345689999


Q ss_pred             ccCC-CCCcHHHHHHHhhc
Q psy9184         483 LFEG-EGDYQFDMYRMMRK  500 (562)
Q Consensus       483 lF~g-~~~~q~dIy~lm~~  500 (562)
                      ++.+ ..+...|||++.-.
T Consensus       435 ~~~~~~~~~~sDvwSlGv~  453 (535)
T 2h8h_A          435 AALYGRFTIKSDVWSFGIL  453 (535)
T ss_dssp             HHHHCCCCHHHHHHHHHHH
T ss_pred             HhccCCCCchhhHHHHHHH
Confidence            7765 45667999886433

>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*

Probab=99.92  E-value=1.1e-25  Score=253.56  Aligned_cols=165  Identities=19%  Similarity=0.259  Sum_probs=135.7

Q ss_pred             eeeeccCceEEEEE--------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCccccccccc
Q psy9184         267 KKIGEGVYGEVFKL--------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTELLKCS  338 (562)
Q Consensus       267 ~~LG~GsfG~Vyka--------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~l~~~~  338 (562)
                      ++||+|+||.||+|        +.||||+++...      ......+.+.+|+.+++.++|                   
T Consensus       375 ~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~------~~~~~~~~~~~E~~il~~l~h-------------------  429 (635)
T 4fl3_A          375 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEA------NDPALKDELLAEANVMQQLDN-------------------  429 (635)
T ss_dssp             EEEEECSSEEEEEEEEECSSCEEEEEEEEECGGG------GCGGGHHHHHHHHHHHHHCCC-------------------
T ss_pred             CEeccCCCEEEEEEEEcCCCcceEEEEEEecccc------CCHHHHHHHHHHHHHHHhCCC-------------------
Confidence            58999999999998        679999998642      223445788999999999998                   


Q ss_pred             ccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc---cCCHHHHHHHHHHHHHHHHHHHhh
Q psy9184         339 CVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK---YRSPNQTYAMILQVVFSLAVAEVE  415 (562)
Q Consensus       339 iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~---~l~e~~i~~I~~QIl~aL~yLH~~  415 (562)
                             |||+++++++.              .+..++|||||.+|++.+.+.   .+++.+++.++.||+.||.|||+ 
T Consensus       430 -------pnIv~l~~~~~--------------~~~~~lv~E~~~~g~L~~~l~~~~~l~~~~~~~i~~qi~~~L~yLH~-  487 (635)
T 4fl3_A          430 -------PYIVRMIGICE--------------AESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEE-  487 (635)
T ss_dssp             -------TTBCCEEEEEE--------------SSSEEEEEECCTTEEHHHHHHHCTTCCHHHHHHHHHHHHHHHHHHHH-
T ss_pred             -------CCEeeEEEEEe--------------cCCEEEEEEccCCCCHHHHHhhCCCCCHHHHHHHHHHHHHHHHHHHH-
Confidence                   99999999885              335899999999998877664   48999999999999999999999 


Q ss_pred             CCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecCC--------cEEEeecCCCccccCC-
Q psy9184         416 LEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVGE--------KICYYDLSQDEELFEG-  486 (562)
Q Consensus       416 ~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~~--------g~v~~~l~~~pelF~g-  486 (562)
                      .||+||||||+|||++.++                    .+||+|||+|+.....        ...++..|++||++.+ 
T Consensus       488 ~~iiHrDLkp~NILl~~~~--------------------~~kL~DFGla~~~~~~~~~~~~~~~~~~t~~y~APE~~~~~  547 (635)
T 4fl3_A          488 SNFVHRDLAARNVLLVTQH--------------------YAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYY  547 (635)
T ss_dssp             TTCCCSCCSGGGEEEEETT--------------------EEEECCTTHHHHTTC-------------CGGGSCHHHHHHC
T ss_pred             CCEeCCCCChHhEEEeCCC--------------------CEEEEEcCCccccccCccccccccCCCCceeeeChhhhcCC
Confidence            7999999999999999886                    7999999999865431        1223456899998876 


Q ss_pred             CCCcHHHHHHHh
Q psy9184         487 EGDYQFDMYRMM  498 (562)
Q Consensus       487 ~~~~q~dIy~lm  498 (562)
                      ..+...|||++.
T Consensus       548 ~~~~~sDvwSlG  559 (635)
T 4fl3_A          548 KFSSKSDVWSFG  559 (635)
T ss_dssp             CCCHHHHHHHHH
T ss_pred             CCCcHHHHHHHH
Confidence            456679998853

>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*

Probab=99.92  E-value=1e-25  Score=224.84  Aligned_cols=180  Identities=19%  Similarity=0.203  Sum_probs=140.8

Q ss_pred             CCCceeeeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCccccc
Q psy9184         261 SALKNCKKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTEL  334 (562)
Q Consensus       261 ~~y~~~~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~l  334 (562)
                      .+|++.+.||+|+||.||+|      +.||+|++....            ..+.+|+.+++.++|               
T Consensus        11 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~------------~~~~~e~~~l~~l~h---------------   63 (284)
T 2a19_B           11 MDFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNN------------EKAEREVKALAKLDH---------------   63 (284)
T ss_dssp             HHEEEEEEEECSSSCCEEEEEETTTCCEEEEEEEECCS------------GGGHHHHHHHHHCCC---------------
T ss_pred             cccceeeeeccCCceEEEEEEEcCCCeEEEEEEecccc------------HHHHHHHHHHHhCCC---------------
Confidence            45899999999999999999      789999998653            245689999999998               


Q ss_pred             ccccccCCCCCCCceeehhhhhccccCC---CCCCCCCCCCeEEEEEEecCCCCCccccc-----cCCHHHHHHHHHHHH
Q psy9184         335 LKCSCVRGRYPDRLVTLWEEFAKTKKSY---NDHPSMFEEDQIFIILELKNGGNDSGDIK-----YRSPNQTYAMILQVV  406 (562)
Q Consensus       335 ~~~~iv~g~~~pnIv~l~~~f~~~~~s~---~~~p~~~~~~~l~LVmE~~~gG~ll~~l~-----~l~e~~i~~I~~QIl  406 (562)
                                 |||+++++++.......   ...........+|+||||+++|++.+.+.     .+++..++.++.||+
T Consensus        64 -----------~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~  132 (284)
T 2a19_B           64 -----------VNIVHYNGCWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQIT  132 (284)
T ss_dssp             -----------TTBCCEEEEEEEEEEC---------CCEEEEEEEEECCCCSCBHHHHHHHGGGSCCCHHHHHHHHHHHH
T ss_pred             -----------CCEEEEeeeEeccccCcccccccccccCcceEEEEEeccCCCCHHHHHhhccCCCCCHHHHHHHHHHHH
Confidence                       88888877764311000   00000012346899999999998877663     489999999999999


Q ss_pred             HHHHHHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecCC----cEEEeecCCCcc
Q psy9184         407 FSLAVAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVGE----KICYYDLSQDEE  482 (562)
Q Consensus       407 ~aL~yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~~----g~v~~~l~~~pe  482 (562)
                      .||.|||+ .||+||||||+|||++.++                    .++|+|||+++.....    ...++..|++||
T Consensus       133 ~~l~~lH~-~~i~H~dlkp~Nil~~~~~--------------------~~kl~Dfg~~~~~~~~~~~~~~~~~~~y~aPE  191 (284)
T 2a19_B          133 KGVDYIHS-KKLINRDLKPSNIFLVDTK--------------------QVKIGDFGLVTSLKNDGKRTRSKGTLRYMSPE  191 (284)
T ss_dssp             HHHHHHHH-TTEECSCCSGGGEEEEETT--------------------EEEECCCTTCEESSCCSCCCCCCSCCTTSCHH
T ss_pred             HHHHHHHh-CCeeeccCCHHHEEEcCCC--------------------CEEECcchhheeccccccccccCCcccccChh
Confidence            99999999 7999999999999999886                    7999999999876542    234577889999


Q ss_pred             ccCCC-CCcHHHHHHHhh
Q psy9184         483 LFEGE-GDYQFDMYRMMR  499 (562)
Q Consensus       483 lF~g~-~~~q~dIy~lm~  499 (562)
                      ++.+. .....|||++.-
T Consensus       192 ~~~~~~~~~~~Di~slG~  209 (284)
T 2a19_B          192 QISSQDYGKEVDLYALGL  209 (284)
T ss_dssp             HHHCSCCCTHHHHHHHHH
T ss_pred             hhccCCCcchhhhHHHHH
Confidence            88764 566799988643

>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}

Probab=99.92  E-value=4.8e-25  Score=223.43  Aligned_cols=198  Identities=18%  Similarity=0.212  Sum_probs=140.4

Q ss_pred             CCCCceeeeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCcccc
Q psy9184         260 SSALKNCKKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTE  333 (562)
Q Consensus       260 ~~~y~~~~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~  333 (562)
                      .++|++.+.||+|+||.||+|      +.||+|++....        ....+.+.+|+.+++.++|              
T Consensus        10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~--------~~~~~~~~~e~~~l~~l~h--------------   67 (320)
T 2i6l_A           10 GSRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTD--------PQSVKHALREIKIIRRLDH--------------   67 (320)
T ss_dssp             TTTEEEEEECC-----CEEEEEETTTTEEEEEEEEECCS--------HHHHHHHHHHHHHHHTCCC--------------
T ss_pred             CCceeEEEEeccCCCeEEEEEEECCCCeEEEEEEEecCC--------hHHHHHHHHHHHHHHhcCC--------------
Confidence            378999999999999999999      789999998542        4455778999999999998              


Q ss_pred             cccccccCCCCCCCceeehhhhhccccCC-CCCCCCCCCCeEEEEEEecCCCCCccccc--cCCHHHHHHHHHHHHHHHH
Q psy9184         334 LLKCSCVRGRYPDRLVTLWEEFAKTKKSY-NDHPSMFEEDQIFIILELKNGGNDSGDIK--YRSPNQTYAMILQVVFSLA  410 (562)
Q Consensus       334 l~~~~iv~g~~~pnIv~l~~~f~~~~~s~-~~~p~~~~~~~l~LVmE~~~gG~ll~~l~--~l~e~~i~~I~~QIl~aL~  410 (562)
                                  |||+++++++....... ...........+|+||||+. |++.+.+.  .+++..++.++.||+.||+
T Consensus        68 ------------~~iv~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~qi~~~l~  134 (320)
T 2i6l_A           68 ------------DNIVKVFEILGPSGSQLTDDVGSLTELNSVYIVQEYME-TDLANVLEQGPLLEEHARLFMYQLLRGLK  134 (320)
T ss_dssp             ------------TTBCCEEEEECTTSCBCCC----CCSCSEEEEEEECCS-EEHHHHHTTCCCCHHHHHHHHHHHHHHHH
T ss_pred             ------------CCeeEEEEeccccccccccccccccccCceeEEeeccC-CCHHHHhhcCCccHHHHHHHHHHHHHHHH
Confidence                        77777777664321100 00111234568999999998 55655554  3889999999999999999


Q ss_pred             HHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecCC--------cEEEeecCCCcc
Q psy9184         411 VAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVGE--------KICYYDLSQDEE  482 (562)
Q Consensus       411 yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~~--------g~v~~~l~~~pe  482 (562)
                      |||+ .||+||||||+|||++..+.                   .+||+|||+++.....        ....+..|++||
T Consensus       135 ~lH~-~~i~H~dlkp~Nil~~~~~~-------------------~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE  194 (320)
T 2i6l_A          135 YIHS-ANVLHRDLKPANLFINTEDL-------------------VLKIGDFGLARIMDPHYSHKGHLSEGLVTKWYRSPR  194 (320)
T ss_dssp             HHHH-TTCBCCCCSGGGEEEETTTT-------------------EEEECCCTTCBCC--------CCCGGGSCCTTCCHH
T ss_pred             HHHh-CCEecCCCCHHHEEEcCCCC-------------------eEEEccCccccccCCCcccccccccccccccccCcH
Confidence            9999 79999999999999985532                   7999999999876431        122366789999


Q ss_pred             ccCC--CCCcHHHHHHHhhcccCCCCCCCCCCC
Q psy9184         483 LFEG--EGDYQFDMYRMMRKQCQNNWQNFTPKN  513 (562)
Q Consensus       483 lF~g--~~~~q~dIy~lm~~~~~~~W~~~~P~t  513 (562)
                      ++.+  ..+...|||++.-.. ...+.+..|+.
T Consensus       195 ~~~~~~~~~~~~Di~slG~il-~el~~g~~pf~  226 (320)
T 2i6l_A          195 LLLSPNNYTKAIDMWAAGCIF-AEMLTGKTLFA  226 (320)
T ss_dssp             HHHCTTCCCHHHHHHHHHHHH-HHHHHSSCSSC
T ss_pred             HhcCcccCCchhhhHhHHHHH-HHHHhCCCCCC
Confidence            7754  455669998864333 23334444543

>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}

Probab=99.92  E-value=1.1e-25  Score=233.95  Aligned_cols=184  Identities=14%  Similarity=0.084  Sum_probs=140.1

Q ss_pred             CCCCceeeeeeccCceEEEEE--------------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCC
Q psy9184         260 SSALKNCKKIGEGVYGEVFKL--------------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTE  325 (562)
Q Consensus       260 ~~~y~~~~~LG~GsfG~Vyka--------------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~  325 (562)
                      .++|++.+.||+|+||.||+|              +.||+|++...             +.+.+|+.+++.++|      
T Consensus        41 ~~~y~~~~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~-------------~~~~~E~~~l~~l~h------  101 (352)
T 2jii_A           41 GRQWKLKSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKD-------------GRLFNEQNFFQRAAK------  101 (352)
T ss_dssp             SCEEEEEEEEEEETTEEEEEEEECC-----------CEEEEEEETT-------------STHHHHHHHHHHHCC------
T ss_pred             CCeEEEEEEecCCCCeEEEEEeecCCccccccccCceEEEEEeccc-------------chHHHHHHHHHHhcc------
Confidence            368999999999999999999              26999999854             256789999999998      


Q ss_pred             CCCCcccccccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc-----cCCHHHHHH
Q psy9184         326 NSTPCFTELLKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK-----YRSPNQTYA  400 (562)
Q Consensus       326 n~~p~fv~l~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~-----~l~e~~i~~  400 (562)
                         ||++.+++......  +++++++++++..            .+...|+||||+ +|++.+.+.     .+++.+++.
T Consensus       102 ---~niv~~~~~~~~~~--~~~i~~~~~~~~~------------~~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~  163 (352)
T 2jii_A          102 ---PLQVNKWKKLYSTP--LLAIPTCMGFGVH------------QDKYRFLVLPSL-GRSLQSALDVSPKHVLSERSVLQ  163 (352)
T ss_dssp             ---HHHHHHHHHHTTCT--TCSCCCCCEEEEE------------TTTEEEEEEECC-CEEHHHHHHHSGGGCCCHHHHHH
T ss_pred             ---cchhhhhhhhccCC--ccCccchhhcccc------------CCcEEEEEecCC-CcCHHHHHHhCCcCCCCHHHHHH
Confidence               44444433322111  2333444444332            256899999999 887766553     489999999


Q ss_pred             HHHHHHHHHHHHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecCC----------
Q psy9184         401 MILQVVFSLAVAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVGE----------  470 (562)
Q Consensus       401 I~~QIl~aL~yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~~----------  470 (562)
                      ++.||+.||.|||+ .||+||||||+|||++.++.                  ..+||+|||+|+.....          
T Consensus       164 i~~qi~~~L~~LH~-~~ivH~Dikp~NIl~~~~~~------------------~~~kl~Dfg~a~~~~~~~~~~~~~~~~  224 (352)
T 2jii_A          164 VACRLLDALEFLHE-NEYVHGNVTAENIFVDPEDQ------------------SQVTLAGYGFAFRYCPSGKHVAYVEGS  224 (352)
T ss_dssp             HHHHHHHHHHHHHH-TTCBCSCCCGGGEEEETTEE------------------EEEEECCGGGCBCSSGGGCCCCCCTTS
T ss_pred             HHHHHHHHHHHHHh-CCccCCCCCHHHEEEcCCCC------------------ceEEEecCcceeeccCCCccccccccc
Confidence            99999999999999 79999999999999987741                  26999999999876432          


Q ss_pred             --cEEEeecCCCccccCC-CCCcHHHHHHHhh
Q psy9184         471 --KICYYDLSQDEELFEG-EGDYQFDMYRMMR  499 (562)
Q Consensus       471 --g~v~~~l~~~pelF~g-~~~~q~dIy~lm~  499 (562)
                        ...++..|++||++.+ ..+...|||++.-
T Consensus       225 ~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~  256 (352)
T 2jii_A          225 RSPHEGDLEFISMDLHKGCGPSRRSDLQSLGY  256 (352)
T ss_dssp             SCTTCSCTTTCCHHHHTTCCCCHHHHHHHHHH
T ss_pred             cccccCCccccCHHHHccCCCCchhhHHHHHH
Confidence              2256778999999887 4566799988643

>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*

Probab=99.92  E-value=2e-26  Score=232.08  Aligned_cols=174  Identities=21%  Similarity=0.284  Sum_probs=130.0

Q ss_pred             CCCCCceeeeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCccc
Q psy9184         259 PSSALKNCKKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFT  332 (562)
Q Consensus       259 ~~~~y~~~~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv  332 (562)
                      ..++|++.+.||+|+||.||+|      +.||||++....       .......+.+|+.+++.++|             
T Consensus        13 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-------~~~~~~~~~~e~~~l~~l~h-------------   72 (303)
T 2vwi_A           13 NRDDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEK-------CQTSMDELLKEIQAMSQCHH-------------   72 (303)
T ss_dssp             CCCCCEEEEECC---CCCEEEEEC----CEEEEECCC-----------------------CCCCCCC-------------
T ss_pred             chhhhhhhheeccccceEEEEEEECCCCcEEEEEEEEhhh-------cchhHHHHHHHHHHHhhcCC-------------
Confidence            4578999999999999999999      789999987543       12334577899999999987             


Q ss_pred             ccccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc-----------cCCHHHHHHH
Q psy9184         333 ELLKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK-----------YRSPNQTYAM  401 (562)
Q Consensus       333 ~l~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~-----------~l~e~~i~~I  401 (562)
                                   |||+++++++..             .+..|+||||+.||++.+.+.           .+++..++.+
T Consensus        73 -------------~~i~~~~~~~~~-------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i  126 (303)
T 2vwi_A           73 -------------PNIVSYYTSFVV-------------KDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATI  126 (303)
T ss_dssp             -------------TTBCCEEEEEES-------------SSCEEEEEECCTTCBHHHHHHHHHHTTTTTTCSSCHHHHHHH
T ss_pred             -------------CCEeeEEEEEee-------------cCCcEEEehhccCCchHHHHHHHhhccccccCCCCHHHHHHH
Confidence                         999999998875             457999999999998876653           2889999999


Q ss_pred             HHHHHHHHHHHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecC----------Cc
Q psy9184         402 ILQVVFSLAVAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVG----------EK  471 (562)
Q Consensus       402 ~~QIl~aL~yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~----------~g  471 (562)
                      +.||+.||.|||+ .||+||||||+|||++.++                    .++|+|||+++....          ..
T Consensus       127 ~~qi~~~l~~lH~-~~i~H~dl~p~Nil~~~~~--------------------~~kl~dfg~~~~~~~~~~~~~~~~~~~  185 (303)
T 2vwi_A          127 LREVLEGLEYLHK-NGQIHRDVKAGNILLGEDG--------------------SVQIADFGVSAFLATGGDITRNKVRKT  185 (303)
T ss_dssp             HHHHHHHHHHHHH-TTCCCCCCSGGGEEECTTC--------------------CEEECCCHHHHHCC-------------
T ss_pred             HHHHHHHHHHHHh-CCCCCCCCChhhEEEcCCC--------------------CEEEEeccchheeccCCCccchhhhcc
Confidence            9999999999999 7999999999999998876                    799999999876543          12


Q ss_pred             EEEeecCCCccccCC--CCCcHHHHHHHhh
Q psy9184         472 ICYYDLSQDEELFEG--EGDYQFDMYRMMR  499 (562)
Q Consensus       472 ~v~~~l~~~pelF~g--~~~~q~dIy~lm~  499 (562)
                      ..++..|++||++.+  ......|||++.-
T Consensus       186 ~~~~~~y~aPE~~~~~~~~~~~~Di~slG~  215 (303)
T 2vwi_A          186 FVGTPCWMAPEVMEQVRGYDFKADIWSFGI  215 (303)
T ss_dssp             --CCCTTCCHHHHHHHHCCCTHHHHHHHHH
T ss_pred             cCCCccccCHHHhccccCCCchhhHHHHHH
Confidence            345677999998865  4566799988643

>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*

Probab=99.92  E-value=1.9e-25  Score=229.21  Aligned_cols=170  Identities=22%  Similarity=0.208  Sum_probs=136.2

Q ss_pred             CCCceeeeeeccCceEEEEE------e--eEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhc-CCccccCCCCCCcc
Q psy9184         261 SALKNCKKIGEGVYGEVFKL------N--NSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKET-SDLQYRTENSTPCF  331 (562)
Q Consensus       261 ~~y~~~~~LG~GsfG~Vyka------~--~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L-~h~~~~~~n~~p~f  331 (562)
                      ++|++.+.||+|+||.||+|      .  .+|+|.+....       .....+.+.+|+.+++.+ +|            
T Consensus        25 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~v~iK~~~~~~-------~~~~~~~~~~E~~~l~~l~~h------------   85 (327)
T 1fvr_A           25 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYA-------SKDDHRDFAGELEVLCKLGHH------------   85 (327)
T ss_dssp             GGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC-------------CHHHHHHHHHTTCCCC------------
T ss_pred             HHccceeeeecCCCceEEEEEEccCCcccceeeeeecccc-------chHHHHHHHHHHHHHHhccCC------------
Confidence            67999999999999999999      2  46999987532       223345688999999999 55            


Q ss_pred             cccccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc-------------------c
Q psy9184         332 TELLKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK-------------------Y  392 (562)
Q Consensus       332 v~l~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~-------------------~  392 (562)
                                    |||+++++++.+             .+.+|+||||+++|++.+.+.                   .
T Consensus        86 --------------p~iv~~~~~~~~-------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~  138 (327)
T 1fvr_A           86 --------------PNIINLLGACEH-------------RGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTAST  138 (327)
T ss_dssp             --------------TTBCCEEEEEEE-------------TTEEEEEECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCS
T ss_pred             --------------Cchhhhceeeee-------------CCceEEEEecCCCCCHHHHHHhccccccccccccccccccc
Confidence                          999999999875             558999999999998866552                   3


Q ss_pred             CCHHHHHHHHHHHHHHHHHHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecC---
Q psy9184         393 RSPNQTYAMILQVVFSLAVAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVG---  469 (562)
Q Consensus       393 l~e~~i~~I~~QIl~aL~yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~---  469 (562)
                      +++.+++.++.||+.||.|||+ .||+||||||+|||++.++                    .+||+|||+++....   
T Consensus       139 ~~~~~~~~i~~qi~~aL~~LH~-~~ivH~dlkp~NIl~~~~~--------------------~~kL~Dfg~~~~~~~~~~  197 (327)
T 1fvr_A          139 LSSQQLLHFAADVARGMDYLSQ-KQFIHRDLAARNILVGENY--------------------VAKIADFGLSRGQEVYVK  197 (327)
T ss_dssp             SCHHHHHHHHHHHHHHHHHHHH-TTEECSCCSGGGEEECGGG--------------------CEEECCTTCEESSCEECC
T ss_pred             CCHHHHHHHHHHHHHHHHHHHh-CCccCCCCccceEEEcCCC--------------------eEEEcccCcCcccccccc
Confidence            7899999999999999999999 7999999999999998876                    799999999974322   


Q ss_pred             -CcEEEeecCCCccccCCC-CCcHHHHHHH
Q psy9184         470 -EKICYYDLSQDEELFEGE-GDYQFDMYRM  497 (562)
Q Consensus       470 -~g~v~~~l~~~pelF~g~-~~~q~dIy~l  497 (562)
                       .....+..|++||++.+. .+...|||++
T Consensus       198 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~sl  227 (327)
T 1fvr_A          198 KTMGRLPVRWMAIESLNYSVYTTNSDVWSY  227 (327)
T ss_dssp             C----CCTTTCCHHHHHHCEECHHHHHHHH
T ss_pred             ccCCCCCccccChhhhccccCCchhcchHH
Confidence             222335568899988764 3566899875

>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}

Probab=99.92  E-value=1.7e-25  Score=250.81  Aligned_cols=171  Identities=18%  Similarity=0.230  Sum_probs=137.7

Q ss_pred             CCCCceee-eeeccCceEEEEE--------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCc
Q psy9184         260 SSALKNCK-KIGEGVYGEVFKL--------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPC  330 (562)
Q Consensus       260 ~~~y~~~~-~LG~GsfG~Vyka--------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~  330 (562)
                      ..++.+.. .||+|+||.||+|        ..||||+++...       .....+.+.+|+.+|+.++|           
T Consensus       334 ~~~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~-------~~~~~~~~~~E~~il~~l~h-----------  395 (613)
T 2ozo_A          334 RDNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGT-------EKADTEEMMREAQIMHQLDN-----------  395 (613)
T ss_dssp             TTSEEEEEEEEEECSSSEEEEEEEECSSCEEEEEEEECCCCC-------SSTTHHHHHHHHHHHTTCCC-----------
T ss_pred             ccceeEcCcEEecCCCcEEEEEEEecCCCcEEEEEEEcCCCC-------ChHHHHHHHHHHHHHHhCCC-----------
Confidence            34555555 8999999999998        469999998642       12334678999999999988           


Q ss_pred             ccccccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc----cCCHHHHHHHHHHHH
Q psy9184         331 FTELLKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK----YRSPNQTYAMILQVV  406 (562)
Q Consensus       331 fv~l~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~----~l~e~~i~~I~~QIl  406 (562)
                                     |||+++++++..              +.+|+|||||.+|++.+.+.    .+++.++..++.||+
T Consensus       396 ---------------pniv~l~~~~~~--------------~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~  446 (613)
T 2ozo_A          396 ---------------PYIVRLIGVCQA--------------EALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVS  446 (613)
T ss_dssp             ---------------TTBCCEEEEEES--------------SSEEEEEECCTTCBHHHHHTTCTTTSCHHHHHHHHHHHH
T ss_pred             ---------------CCEeeEEEEecc--------------CCeEEEEEeCCCCcHHHHHhhccCCCCHHHHHHHHHHHH
Confidence                           999999998853              36899999999998876653    389999999999999


Q ss_pred             HHHHHHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecCCc--------EEEeecC
Q psy9184         407 FSLAVAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVGEK--------ICYYDLS  478 (562)
Q Consensus       407 ~aL~yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~~g--------~v~~~l~  478 (562)
                      .||.|||+ .+|+||||||+|||++.++                    .+||+|||+|+......        ..++..|
T Consensus       447 ~~L~~LH~-~~iiHrDlkp~NILl~~~~--------------------~vkL~DFGla~~~~~~~~~~~~~~~~~~~~~y  505 (613)
T 2ozo_A          447 MGMKYLEE-KNFVHRNLAARNVLLVNRH--------------------YAKISDFGLSKALGADDSYYTARSAGKWPLKW  505 (613)
T ss_dssp             HHHHHHHH-TTCCCSCCSGGGEEEEETT--------------------EEEECCCSTTTTCC--------------CCTT
T ss_pred             HHHHHHHH-CCEEcCcCCHHHEEEcCCC--------------------cEEEeeccCcccccCCCceeeeccCCCCccce
Confidence            99999999 7999999999999999886                    79999999998754311        1223568


Q ss_pred             CCccccCC-CCCcHHHHHHHh
Q psy9184         479 QDEELFEG-EGDYQFDMYRMM  498 (562)
Q Consensus       479 ~~pelF~g-~~~~q~dIy~lm  498 (562)
                      ++||++.+ ..+...|||++.
T Consensus       506 ~APE~~~~~~~~~~sDvwSlG  526 (613)
T 2ozo_A          506 YAPECINFRKFSSRSDVWSYG  526 (613)
T ss_dssp             SCHHHHHHCCCCHHHHHHHHH
T ss_pred             eCHhhhcCCCCCcHHHHHHHH
Confidence            99998875 566679998853

>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*

Probab=99.92  E-value=2.9e-25  Score=226.17  Aligned_cols=230  Identities=16%  Similarity=0.167  Sum_probs=160.3

Q ss_pred             CCCCceeeeeeccCceEEEEE-----eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCccccc
Q psy9184         260 SSALKNCKKIGEGVYGEVFKL-----NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTEL  334 (562)
Q Consensus       260 ~~~y~~~~~LG~GsfG~Vyka-----~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~l  334 (562)
                      ..+|++.+.||+|+||.||+|     +.||+|++....      ......+.+.+|+.+++.+.|.              
T Consensus        27 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~------~~~~~~~~~~~E~~~l~~l~~~--------------   86 (313)
T 3cek_A           27 GRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEE------ADNQTLDSYRNEIAYLNKLQQH--------------   86 (313)
T ss_dssp             TEEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECSS------CCHHHHHHHHHHHHHHHHHGGG--------------
T ss_pred             cceEEEEEEecCCCCEEEEEEEcCCCcEEEEEEecccc------ccccchHHHHHHHHHHHhcccc--------------
Confidence            367999999999999999999     789999998653      1244567889999999999851              


Q ss_pred             ccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc---cCCHHHHHHHHHHHHHHHHH
Q psy9184         335 LKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK---YRSPNQTYAMILQVVFSLAV  411 (562)
Q Consensus       335 ~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~---~l~e~~i~~I~~QIl~aL~y  411 (562)
                                ||||+++++++..             ++.+|+||| +.+|++.+.+.   .+++.+++.++.||+.||.|
T Consensus        87 ----------~~~iv~~~~~~~~-------------~~~~~lv~e-~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~  142 (313)
T 3cek_A           87 ----------SDKIIRLYDYEIT-------------DQYIYMVME-CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHT  142 (313)
T ss_dssp             ----------CTTBCCEEEEEEC-------------SSEEEEEEC-CCSEEHHHHHHHCSSCCHHHHHHHHHHHHHHHHH
T ss_pred             ----------CCceEEEEEEeec-------------CCEEEEEEe-cCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHH
Confidence                      4899999998875             558999999 55666665553   48899999999999999999


Q ss_pred             HHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecC-------CcEEEeecCCCcccc
Q psy9184         412 AEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVG-------EKICYYDLSQDEELF  484 (562)
Q Consensus       412 LH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~-------~g~v~~~l~~~pelF  484 (562)
                      ||+ .||+||||||+|||++. +                    .+||+|||+++....       ....++..|++||++
T Consensus       143 LH~-~~ivH~dlkp~NIl~~~-~--------------------~~kL~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~  200 (313)
T 3cek_A          143 IHQ-HGIVHSDLKPANFLIVD-G--------------------MLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAI  200 (313)
T ss_dssp             HHH-TTCCCCCCCGGGEEEET-T--------------------EEEECCCSSSCC--------------CCGGGCCHHHH
T ss_pred             HHH-CCceecCCCcccEEEEC-C--------------------eEEEeeccccccccCccccccccCCCCCCCcCCHHHH
Confidence            999 79999999999999964 3                    799999999987643       233457889999998


Q ss_pred             CC------------CCCcHHHHHHHhhcccCCCCCCCCCCChhhh-HHHHHHHHhhcccCCCCCCCchhHHHHHHHHHHH
Q psy9184         485 EG------------EGDYQFDMYRMMRKQCQNNWQNFTPKNNVFW-IHYLVDKATCLKKGYQYLRAPRHQAFELLEELGQ  551 (562)
Q Consensus       485 ~g------------~~~~q~dIy~lm~~~~~~~W~~~~P~tn~~w-l~yl~~~Ll~~~~~~~~~~~~~~~~~~~l~~l~~  551 (562)
                      .+            ..+...|||++.-... ..+.+..|+....- ...+ ...+.......-+...    -..+.+|..
T Consensus       201 ~~~~~~~~~~~~~~~~~~~~Di~slG~il~-el~~g~~pf~~~~~~~~~~-~~~~~~~~~~~~~~~~----~~~l~~li~  274 (313)
T 3cek_A          201 KDMSSSRENGKSKSKISPKSDVWSLGCILY-YMTYGKTPFQQIINQISKL-HAIIDPNHEIEFPDIP----EKDLQDVLK  274 (313)
T ss_dssp             TTCC----------CCCHHHHHHHHHHHHH-HHHHSSCTTTTCCSHHHHH-HHHHCTTSCCCCCCCS----CHHHHHHHH
T ss_pred             hhcccccccccccccCCchHHHHHHHHHHH-HHHhCCCchhhHHHHHHHH-HHHHhcccccCCcccc----hHHHHHHHH
Confidence            75            3455699988643332 23333344422110 1111 1222211111111111    235667778


Q ss_pred             hcCCCcCcCC
Q psy9184         552 NALHFDSCYE  561 (562)
Q Consensus       552 ~~l~~~s~~~  561 (562)
                      .+|..+...|
T Consensus       275 ~~l~~dp~~R  284 (313)
T 3cek_A          275 CCLKRDPKQR  284 (313)
T ss_dssp             HHTCSSTTTS
T ss_pred             HHccCCcccC
Confidence            8888776655

>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*

Probab=99.92  E-value=9e-26  Score=231.59  Aligned_cols=177  Identities=17%  Similarity=0.189  Sum_probs=139.8

Q ss_pred             CCCCCceeeeeeccCceEEEEEe-----------eEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCC
Q psy9184         259 PSSALKNCKKIGEGVYGEVFKLN-----------NSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENS  327 (562)
Q Consensus       259 ~~~~y~~~~~LG~GsfG~Vyka~-----------~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~  327 (562)
                      ...+|++.+.||+|+||.||+|.           .||||++....       .......+.+|+.+++.++|        
T Consensus        28 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~-------~~~~~~~~~~E~~~l~~l~h--------   92 (327)
T 2yfx_A           28 PRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVC-------SEQDELDFLMEALIISKFNH--------   92 (327)
T ss_dssp             CGGGCEEEEECC--CSSCEEEEEC--------CCEEEEEECCSSC-------CHHHHHHHHHHHHHHHHCCC--------
T ss_pred             ChhheEEEEEEcCCCCeeEEEEEEcCCCCCCccceEEEEEecccc-------chhhHHHHHHHHHHHhhCCC--------
Confidence            34679999999999999999992           69999997532       23344678899999999988        


Q ss_pred             CCcccccccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc----------cCCHHH
Q psy9184         328 TPCFTELLKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK----------YRSPNQ  397 (562)
Q Consensus       328 ~p~fv~l~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~----------~l~e~~  397 (562)
                                        |||+++++++..             .+..|+||||++||++.+.+.          .+++.+
T Consensus        93 ------------------~~iv~~~~~~~~-------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~  141 (327)
T 2yfx_A           93 ------------------QNIVRCIGVSLQ-------------SLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLD  141 (327)
T ss_dssp             ------------------TTBCCEEEEECS-------------SSSCEEEEECCTTEEHHHHHHHTSCCSSSTTSCCHHH
T ss_pred             ------------------CCCCeEEEEEcC-------------CCCcEEEEecCCCCcHHHHHHhhcccccccccccHHH
Confidence                              999999998875             457899999999998866553          278899


Q ss_pred             HHHHHHHHHHHHHHHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecCC-------
Q psy9184         398 TYAMILQVVFSLAVAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVGE-------  470 (562)
Q Consensus       398 i~~I~~QIl~aL~yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~~-------  470 (562)
                      ++.++.||+.||.|||+ .||+||||||+|||++..+..                 ..++|+|||+++.....       
T Consensus       142 ~~~i~~qi~~al~~LH~-~~i~H~dlkp~NIli~~~~~~-----------------~~~kl~Dfg~~~~~~~~~~~~~~~  203 (327)
T 2yfx_A          142 LLHVARDIACGCQYLEE-NHFIHRDIAARNCLLTCPGPG-----------------RVAKIGDFGMARDIYRASYYRKGG  203 (327)
T ss_dssp             HHHHHHHHHHHHHHHHH-TTCCCSCCCGGGEEESCSSTT-----------------CCEEECCCHHHHHHHC------CC
T ss_pred             HHHHHHHHHHHHHHHhh-CCeecCcCCHhHEEEecCCCc-----------------ceEEECccccccccccccccccCC
Confidence            99999999999999999 799999999999999965421                 26999999999754331       


Q ss_pred             cEEEeecCCCccccCC-CCCcHHHHHHHhh
Q psy9184         471 KICYYDLSQDEELFEG-EGDYQFDMYRMMR  499 (562)
Q Consensus       471 g~v~~~l~~~pelF~g-~~~~q~dIy~lm~  499 (562)
                      ....+..|++||++.+ ..+...|||++.-
T Consensus       204 ~~~~~~~y~aPE~~~~~~~~~~~Di~slG~  233 (327)
T 2yfx_A          204 CAMLPVKWMPPEAFMEGIFTSKTDTWSFGV  233 (327)
T ss_dssp             GGGSCGGGCCHHHHHHCCCCHHHHHHHHHH
T ss_pred             CcCCCcceeCHhHhcCCCCCchhhHHHHHH
Confidence            1223556899998765 4566799988633

>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*

Probab=99.92  E-value=7.4e-25  Score=230.52  Aligned_cols=190  Identities=19%  Similarity=0.185  Sum_probs=145.2

Q ss_pred             CCCceeeeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCccccc
Q psy9184         261 SALKNCKKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTEL  334 (562)
Q Consensus       261 ~~y~~~~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~l  334 (562)
                      ++|++.+.||+|+||.||+|      +.||||++...         ......+..|+.+++.+.+..        +    
T Consensus        54 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~---------~~~~~~~~~e~~~l~~l~~~~--------~----  112 (382)
T 2vx3_A           54 DRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNK---------KAFLNQAQIEVRLLELMNKHD--------T----  112 (382)
T ss_dssp             TTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSS---------HHHHHHHHHHHHHHHHHHHCS--------S----
T ss_pred             eeEEEEEEEeecCCEEEEEEEEcCCCcEEEEEEEecc---------HHHHHHHHHHHHHHHHHHhcc--------c----
Confidence            68999999999999999999      78999999743         233456788999999887510        0    


Q ss_pred             ccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc-----cCCHHHHHHHHHHHHHHH
Q psy9184         335 LKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK-----YRSPNQTYAMILQVVFSL  409 (562)
Q Consensus       335 ~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~-----~l~e~~i~~I~~QIl~aL  409 (562)
                              ..+++|+++++.|..             .+.+|+||||+. |++.+.+.     .+++..++.++.||+.||
T Consensus       113 --------~~~~~iv~~~~~~~~-------------~~~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~i~~qi~~al  170 (382)
T 2vx3_A          113 --------EMKYYIVHLKRHFMF-------------RNHLCLVFEMLS-YNLYDLLRNTNFRGVSLNLTRKFAQQMCTAL  170 (382)
T ss_dssp             --------GGGGGBCCEEEEEEE-------------TTEEEEEEECCC-CBHHHHHHHTTTSCCCHHHHHHHHHHHHHHH
T ss_pred             --------ccceeEEEeeeeecc-------------CCceEEEEecCC-CCHHHHHhhcCcCCCCHHHHHHHHHHHHHHH
Confidence                    013468888888875             558999999996 56666553     388999999999999999


Q ss_pred             HHHHh-hCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecC--CcEEEeecCCCccccCC
Q psy9184         410 AVAEV-ELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVG--EKICYYDLSQDEELFEG  486 (562)
Q Consensus       410 ~yLH~-~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~--~g~v~~~l~~~pelF~g  486 (562)
                      .|||. ..||+||||||+|||+..++.                  ..+||+|||+|+....  ...+.+..|++||++.+
T Consensus       171 ~~lH~~~~~ivHrDlkp~NIll~~~~~------------------~~~kL~DFG~a~~~~~~~~~~~~t~~y~aPE~~~~  232 (382)
T 2vx3_A          171 LFLATPELSIIHCDLKPENILLCNPKR------------------SAIKIVDFGSSCQLGQRIYQYIQSRFYRSPEVLLG  232 (382)
T ss_dssp             HHHTSTTTCEECCCCSGGGEEESSTTS------------------CCEEECCCTTCEETTCCCCSSCSCGGGCCHHHHTT
T ss_pred             HHhccCCCCEEcCCCCcccEEEecCCC------------------CcEEEEeccCceecccccccccCCccccChHHHcC
Confidence            99994 268999999999999965321                  1699999999987654  33455778999999887


Q ss_pred             -CCCcHHHHHHHhhcccCCCCCCCCCC
Q psy9184         487 -EGDYQFDMYRMMRKQCQNNWQNFTPK  512 (562)
Q Consensus       487 -~~~~q~dIy~lm~~~~~~~W~~~~P~  512 (562)
                       ..+...|||++.-... ..+.+..|+
T Consensus       233 ~~~~~~~DiwSlG~il~-elltg~~pf  258 (382)
T 2vx3_A          233 MPYDLAIDMWSLGCILV-EMHTGEPLF  258 (382)
T ss_dssp             CCCCTHHHHHHHHHHHH-HHHHSSCSS
T ss_pred             CCCCcHHHHHHHHHHHH-HHHhCCCCC
Confidence             4567799998643332 333344444

>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*

Probab=99.92  E-value=2e-25  Score=223.29  Aligned_cols=170  Identities=19%  Similarity=0.237  Sum_probs=134.5

Q ss_pred             CCCCceeeeeeccCceEEEEE----eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCcccccc
Q psy9184         260 SSALKNCKKIGEGVYGEVFKL----NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTELL  335 (562)
Q Consensus       260 ~~~y~~~~~LG~GsfG~Vyka----~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~l~  335 (562)
                      .++|++.+.||+|+||.||+|    +.||+|++....          ..+.+.+|+.+++.++|                
T Consensus        20 ~~~y~~~~~lg~G~~g~V~~~~~~~~~vavK~~~~~~----------~~~~~~~E~~~l~~l~h----------------   73 (278)
T 1byg_A           20 MKELKLLQTIGKGEFGDVMLGDYRGNKVAVKCIKNDA----------TAQAFLAEASVMTQLRH----------------   73 (278)
T ss_dssp             GGGEEEEEEEEECSSCEEEEEEETTEEEEEEECCCCC------------HHHHHTHHHHTTCCC----------------
T ss_pred             hhhceEEeEEecCCCceEEEEEEcCCEEEEEEecchh----------HHHHHHHHHHHHHhCCC----------------
Confidence            367999999999999999999    889999987542          23568899999999998                


Q ss_pred             cccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCcccccc-----CCHHHHHHHHHHHHHHHH
Q psy9184         336 KCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIKY-----RSPNQTYAMILQVVFSLA  410 (562)
Q Consensus       336 ~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~~-----l~e~~i~~I~~QIl~aL~  410 (562)
                                |||+++++++..            ..+.+|+||||+++|++.+.+..     +++..++.++.||+.||.
T Consensus        74 ----------~~iv~~~~~~~~------------~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~  131 (278)
T 1byg_A           74 ----------SNLVQLLGVIVE------------EKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAME  131 (278)
T ss_dssp             ----------TTBCCEEEEECC------------C--CCEEEECCCTTEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
T ss_pred             ----------CCEeeEEEEEEc------------CCCceEEEEecCCCCCHHHHHHhcccccCCHHHHHHHHHHHHHHHH
Confidence                      999999987643            13478999999999887766642     899999999999999999


Q ss_pred             HHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecCC--cEEEeecCCCccccCC-C
Q psy9184         411 VAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVGE--KICYYDLSQDEELFEG-E  487 (562)
Q Consensus       411 yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~~--g~v~~~l~~~pelF~g-~  487 (562)
                      |||+ .||+||||||+|||++.++                    .++|+|||+++.....  ....+..|++||++.+ .
T Consensus       132 ~lH~-~~i~H~dlkp~Nil~~~~~--------------------~~~l~Dfg~~~~~~~~~~~~~~~~~y~aPE~~~~~~  190 (278)
T 1byg_A          132 YLEG-NNFVHRDLAARNVLVSEDN--------------------VAKVSDFGLTKEASSTQDTGKLPVKWTAPEALREKK  190 (278)
T ss_dssp             HHHH-TTCCCSCCSGGGEEECTTS--------------------CEEECCCCC------------CCTTTSCHHHHHHCC
T ss_pred             HHHh-CCccccCCCcceEEEeCCC--------------------cEEEeeccccccccccccCCCccccccCHHHhCCCC
Confidence            9999 7999999999999999876                    7999999999876542  2234556899998865 4


Q ss_pred             CCcHHHHHHHh
Q psy9184         488 GDYQFDMYRMM  498 (562)
Q Consensus       488 ~~~q~dIy~lm  498 (562)
                      .+...|||++.
T Consensus       191 ~~~~~Di~slG  201 (278)
T 1byg_A          191 FSTKSDVWSFG  201 (278)
T ss_dssp             CCHHHHHHHHH
T ss_pred             CCchhcHHHHH
Confidence            56678998863

>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}

Probab=99.92  E-value=3.3e-25  Score=222.68  Aligned_cols=226  Identities=16%  Similarity=0.125  Sum_probs=161.9

Q ss_pred             CCCceeeeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCccccc
Q psy9184         261 SALKNCKKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTEL  334 (562)
Q Consensus       261 ~~y~~~~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~l  334 (562)
                      +.|.....||+|+||.||+|      ..||+|++....        ....+.+.+|+.+++.++|               
T Consensus        22 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~--------~~~~~~~~~e~~~l~~l~h---------------   78 (295)
T 2clq_A           22 DENGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERD--------SRYSQPLHEEIALHKHLKH---------------   78 (295)
T ss_dssp             CTTSSBCEEEECSSSEEEEEEETTTCCEEEEEEEECCC--------C---HHHHHHHHHHHTCCC---------------
T ss_pred             cCCCCcEEEeecCcEEEEEEEECCCCeEEEEEEccCCc--------hHHHHHHHHHHHHHHhCCC---------------
Confidence            45667779999999999999      689999998653        2334678899999999998               


Q ss_pred             ccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc------cCCHHHHHHHHHHHHHH
Q psy9184         335 LKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK------YRSPNQTYAMILQVVFS  408 (562)
Q Consensus       335 ~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~------~l~e~~i~~I~~QIl~a  408 (562)
                                 |||+++++++..             .+..++||||+++|++.+.+.      .+++..++.++.||+.|
T Consensus        79 -----------~~iv~~~~~~~~-------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~  134 (295)
T 2clq_A           79 -----------KNIVQYLGSFSE-------------NGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEG  134 (295)
T ss_dssp             -----------TTBCCEEEEEEE-------------TTEEEEEEECCSEEEHHHHHHHTTCCCTTCHHHHHHHHHHHHHH
T ss_pred             -----------CCEeeEeeEEEe-------------CCcEEEEEEeCCCCCHHHHHHhhccCCCccHHHHHHHHHHHHHH
Confidence                       999999998875             558999999999887766553      25688999999999999


Q ss_pred             HHHHHhhCCeEeccCCCCCEEEcc-CCCCCcccccCCcccccccCCceEEEEeccceeeecC-----CcEEEeecCCCcc
Q psy9184         409 LAVAEVELEFEHRDLHMSNILVLQ-TDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVG-----EKICYYDLSQDEE  482 (562)
Q Consensus       409 L~yLH~~~~IiHRDLKpeNILl~~-~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~-----~g~v~~~l~~~pe  482 (562)
                      |.|||+ .||+||||||+|||++. ++                    .++|+|||+++....     ....++..|++||
T Consensus       135 l~~lH~-~~i~H~dl~p~Nil~~~~~~--------------------~~kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE  193 (295)
T 2clq_A          135 LKYLHD-NQIVHRDIKGDNVLINTYSG--------------------VLKISDFGTSKRLAGINPCTETFTGTLQYMAPE  193 (295)
T ss_dssp             HHHHHH-TTEECCCCSGGGEEEETTTC--------------------CEEECCTTTCEESCC-----CCCCCCGGGCCHH
T ss_pred             HHHHHh-CCEEccCCChhhEEEECCCC--------------------CEEEeecccccccCCCCCcccccCCCccccChh
Confidence            999999 79999999999999987 44                    799999999987653     2234567789999


Q ss_pred             ccCCC---CCcHHHHHHHhhcccCCCCCCCCCCChhhh--HHHHHHHHhhcccCCCCCCCchhHHHHHHHHHHHhcCCCc
Q psy9184         483 LFEGE---GDYQFDMYRMMRKQCQNNWQNFTPKNNVFW--IHYLVDKATCLKKGYQYLRAPRHQAFELLEELGQNALHFD  557 (562)
Q Consensus       483 lF~g~---~~~q~dIy~lm~~~~~~~W~~~~P~tn~~w--l~yl~~~Ll~~~~~~~~~~~~~~~~~~~l~~l~~~~l~~~  557 (562)
                      ++.+.   .....|||++.-... ..+.+..|+.....  ..............++.      ..-..+.+|...+|..+
T Consensus       194 ~~~~~~~~~~~~~Di~slG~il~-~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~li~~~l~~d  266 (295)
T 2clq_A          194 IIDKGPRGYGKAADIWSLGCTII-EMATGKPPFYELGEPQAAMFKVGMFKVHPEIPE------SMSAEAKAFILKCFEPD  266 (295)
T ss_dssp             HHHHGGGGCSHHHHHHHHHHHHH-HHHHTSCTTGGGSSHHHHHHHHHHHCCCCCCCT------TSCHHHHHHHHHTTCSS
T ss_pred             hhcCCCCCCCcHHHHHHHHHHHH-HHHHCCCCccCCCchhHHHHhhccccccccccc------cCCHHHHHHHHHHccCC
Confidence            88653   456699988644333 23334445432110  11111111120111111      11346777888899888


Q ss_pred             CcCC
Q psy9184         558 SCYE  561 (562)
Q Consensus       558 s~~~  561 (562)
                      ...|
T Consensus       267 p~~R  270 (295)
T 2clq_A          267 PDKR  270 (295)
T ss_dssp             TTTS
T ss_pred             hhhC
Confidence            7765

>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A

Probab=99.92  E-value=4.5e-25  Score=229.36  Aligned_cols=194  Identities=16%  Similarity=0.163  Sum_probs=145.6

Q ss_pred             CCCCCCceeeeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCcc
Q psy9184         258 YPSSALKNCKKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCF  331 (562)
Q Consensus       258 ~~~~~y~~~~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~f  331 (562)
                      +..++|++.+.||+|+||.||+|      +.||||++...         ......+.+|+.+++.+.|...         
T Consensus        16 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~---------~~~~~~~~~e~~~l~~l~~~~~---------   77 (373)
T 1q8y_A           16 YKDARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGD---------KVYTEAAEDEIKLLQRVNDADN---------   77 (373)
T ss_dssp             ETTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSC---------HHHHHHHHHHHHHHHHHHHTCC---------
T ss_pred             ccCCeEEEEEeeeecCCeEEEEEEecCCCcEEEEEEecCC---------ccchhhhhHHHHHHHHhhcccc---------
Confidence            34578999999999999999999      79999999743         2234567899999999885100         


Q ss_pred             cccccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc-----cCCHHHHHHHHHHHH
Q psy9184         332 TELLKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK-----YRSPNQTYAMILQVV  406 (562)
Q Consensus       332 v~l~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~-----~l~e~~i~~I~~QIl  406 (562)
                      ...      ....||||+++++++....         .....+++|||++ +|++.+.+.     .+++..++.++.||+
T Consensus        78 ~~~------~~~~~~~i~~~~~~~~~~~---------~~~~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~~i~~qi~  141 (373)
T 1q8y_A           78 TKE------DSMGANHILKLLDHFNHKG---------PNGVHVVMVFEVL-GENLLALIKKYEHRGIPLIYVKQISKQLL  141 (373)
T ss_dssp             SHH------HHHHHTTBCCCCEEEEEEE---------TTEEEEEEEECCC-CEEHHHHHHHTTTSCCCHHHHHHHHHHHH
T ss_pred             cch------hccccchHHHHHHHhhccC---------CCCceEEEEEecC-CCCHHHHHHHhhccCCcHHHHHHHHHHHH
Confidence            000      0001389999999887532         0123789999999 677766653     288999999999999


Q ss_pred             HHHHHHHhhC-CeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecC--CcEEEeecCCCccc
Q psy9184         407 FSLAVAEVEL-EFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVG--EKICYYDLSQDEEL  483 (562)
Q Consensus       407 ~aL~yLH~~~-~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~--~g~v~~~l~~~pel  483 (562)
                      .||.|||+ . ||+||||||+|||++..+..              .....+||+|||+|+....  ....++..|++||+
T Consensus       142 ~aL~~lH~-~~~ivH~Dikp~NIll~~~~~~--------------~~~~~~kl~Dfg~a~~~~~~~~~~~~t~~y~aPE~  206 (373)
T 1q8y_A          142 LGLDYMHR-RCGIIHTDIKPENVLMEIVDSP--------------ENLIQIKIADLGNACWYDEHYTNSIQTREYRSPEV  206 (373)
T ss_dssp             HHHHHHHH-TTCEECSCCSGGGEEEEEEETT--------------TTEEEEEECCCTTCEETTBCCCSCCSCGGGCCHHH
T ss_pred             HHHHHHHh-cCCEEecCCChHHeEEeccCCC--------------cCcceEEEcccccccccCCCCCCCCCCccccCcHH
Confidence            99999999 6 99999999999999754310              0113799999999987654  33456788999999


Q ss_pred             cCCC-CCcHHHHHHHhhc
Q psy9184         484 FEGE-GDYQFDMYRMMRK  500 (562)
Q Consensus       484 F~g~-~~~q~dIy~lm~~  500 (562)
                      +.+. .+...|||++.-.
T Consensus       207 ~~~~~~~~~~Di~slG~i  224 (373)
T 1q8y_A          207 LLGAPWGCGADIWSTACL  224 (373)
T ss_dssp             HHTCCCCTHHHHHHHHHH
T ss_pred             HhCCCCCchHhHHHHHHH
Confidence            8774 5677999886433

>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*

Probab=99.92  E-value=9.7e-25  Score=224.16  Aligned_cols=170  Identities=18%  Similarity=0.229  Sum_probs=139.4

Q ss_pred             CCCceeeeeeccCceEEEEE----eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHh--cCCccccCCCCCCccccc
Q psy9184         261 SALKNCKKIGEGVYGEVFKL----NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKE--TSDLQYRTENSTPCFTEL  334 (562)
Q Consensus       261 ~~y~~~~~LG~GsfG~Vyka----~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~--L~h~~~~~~n~~p~fv~l  334 (562)
                      ++|++.+.||+|+||.||+|    +.||||++....           ...+.+|+.+++.  ++|               
T Consensus        42 ~~y~~~~~lg~G~~g~Vy~~~~~~~~vavK~~~~~~-----------~~~~~~e~~~~~~~~l~h---------------   95 (342)
T 1b6c_B           42 RTIVLQESIGKGRFGEVWRGKWRGEEVAVKIFSSRE-----------ERSWFREAEIYQTVMLRH---------------   95 (342)
T ss_dssp             HHCEEEEEEEEETTEEEEEEEETTEEEEEEEECGGG-----------HHHHHHHHHHHHHSCCCC---------------
T ss_pred             ccEEEEeeecCCCCcEEEEEEEcCccEEEEEeCchh-----------HHHHHHHHHHHHHhhcCC---------------
Confidence            45899999999999999999    899999987431           2456789999888  566               


Q ss_pred             ccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc--cCCHHHHHHHHHHHHHHHHHH
Q psy9184         335 LKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK--YRSPNQTYAMILQVVFSLAVA  412 (562)
Q Consensus       335 ~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~--~l~e~~i~~I~~QIl~aL~yL  412 (562)
                                 |||+++++++....         .....+|+||||+.+|++.+.+.  .+++.+++.++.||+.||.||
T Consensus        96 -----------~ni~~~~~~~~~~~---------~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~i~~~i~~~l~~l  155 (342)
T 1b6c_B           96 -----------ENILGFIAADNKDN---------GTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIKLALSTASGLAHL  155 (342)
T ss_dssp             -----------TTBCCEEEEEECCC---------SSCCCEEEEECCCTTCBHHHHHHHCCBCHHHHHHHHHHHHHHHHHH
T ss_pred             -----------CcEEEEEeeecccC---------CccceeEEEEeecCCCcHHHHHhccCccHHHHHHHHHHHHHHHHHH
Confidence                       99999998887521         01237999999999998877664  389999999999999999999


Q ss_pred             H--------hhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecCC---------cEEEe
Q psy9184         413 E--------VELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVGE---------KICYY  475 (562)
Q Consensus       413 H--------~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~~---------g~v~~  475 (562)
                      |        + .+|+||||||+|||++.++                    .+||+|||+++.....         ...++
T Consensus       156 H~~~~~~~~~-~~ivH~Dlkp~NIll~~~~--------------------~~kL~Dfg~~~~~~~~~~~~~~~~~~~~gt  214 (342)
T 1b6c_B          156 HMEIVGTQGK-PAIAHRDLKSKNILVKKNG--------------------TCCIADLGLAVRHDSATDTIDIAPNHRVGT  214 (342)
T ss_dssp             HCCBCSTTCB-CEEECSCCSGGGEEECTTS--------------------CEEECCCTTCEEEETTTTEEEECCCSCCCC
T ss_pred             HHHHhhhccc-CCeeeCCCCHHHEEECCCC--------------------CEEEEECCCceeccccccccccccccCCcC
Confidence            9        7 7999999999999998886                    7999999999877642         22457


Q ss_pred             ecCCCccccCCCCC-------cHHHHHHH
Q psy9184         476 DLSQDEELFEGEGD-------YQFDMYRM  497 (562)
Q Consensus       476 ~l~~~pelF~g~~~-------~q~dIy~l  497 (562)
                      ..|++||++.+...       .+.|||++
T Consensus       215 ~~y~aPE~~~~~~~~~~~~~~~~~Di~sl  243 (342)
T 1b6c_B          215 KRYMAPEVLDDSINMKHFESFKRADIYAM  243 (342)
T ss_dssp             GGGCCHHHHTSCCCTTCHHHHHHHHHHHH
T ss_pred             cccCCHhhhcccccccccccCCcccHHHH
Confidence            78999999887532       35899885

>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}

Probab=99.92  E-value=6.2e-25  Score=248.82  Aligned_cols=177  Identities=16%  Similarity=0.171  Sum_probs=144.9

Q ss_pred             CCCceeeeeeccCceEEEEE-------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCcccc
Q psy9184         261 SALKNCKKIGEGVYGEVFKL-------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTE  333 (562)
Q Consensus       261 ~~y~~~~~LG~GsfG~Vyka-------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~  333 (562)
                      ++|++.+.||+|+||.||+|       +.||||++....       .......+.+|+.+++.++|              
T Consensus        80 ~~y~i~~~lg~G~~g~Vy~a~~~~~~~~~vaiK~~~~~~-------~~~~~~~~~~E~~~l~~l~h--------------  138 (681)
T 2pzi_A           80 GQYEVKGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHSG-------DAEAQAMAMAERQFLAEVVH--------------  138 (681)
T ss_dssp             TTEEEEEEEEEETTEEEEEEEEGGGTTEEEEEEESCSSC-------CHHHHHHHHHHHGGGGGCCC--------------
T ss_pred             CceEEEEEEeeCCCeEEEEEEEcCCCCcEEEEEEeCccC-------CHHHHHHHHHHHHHHHhcCC--------------
Confidence            68999999999999999999       679999987542       23445678899999999998              


Q ss_pred             cccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc-cCCHHHHHHHHHHHHHHHHHH
Q psy9184         334 LLKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK-YRSPNQTYAMILQVVFSLAVA  412 (562)
Q Consensus       334 l~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~-~l~e~~i~~I~~QIl~aL~yL  412 (562)
                                  |||+++++++.....        ......||||||++||++.+.+. .+++.+++.++.||+.||.||
T Consensus       139 ------------p~iv~~~~~~~~~~~--------~~~~~~~lv~E~~~g~~L~~~~~~~l~~~~~~~~~~qi~~aL~~l  198 (681)
T 2pzi_A          139 ------------PSIVQIFNFVEHTDR--------HGDPVGYIVMEYVGGQSLKRSKGQKLPVAEAIAYLLEILPALSYL  198 (681)
T ss_dssp             ------------TTBCCEEEEEEEECT--------TSCEEEEEEEECCCCEECC----CCCCHHHHHHHHHHHHHHHHHH
T ss_pred             ------------CCcCeEeeeEeecCC--------CCCceeEEEEEeCCCCcHHHHHhCCCCHHHHHHHHHHHHHHHHHH
Confidence                        999999998876320        11223799999999998876554 489999999999999999999


Q ss_pred             HhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecCC-cEEEeecCCCccccCCCCCcH
Q psy9184         413 EVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVGE-KICYYDLSQDEELFEGEGDYQ  491 (562)
Q Consensus       413 H~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~~-g~v~~~l~~~pelF~g~~~~q  491 (562)
                      |+ .||+||||||+|||++.+                     .+||+|||+++..... ..+++..|++||++.+.....
T Consensus       199 H~-~giiHrDlkp~NIll~~~---------------------~~kl~DFG~a~~~~~~~~~~gt~~y~aPE~~~~~~~~~  256 (681)
T 2pzi_A          199 HS-IGLVYNDLKPENIMLTEE---------------------QLKLIDLGAVSRINSFGYLYGTPGFQAPEIVRTGPTVA  256 (681)
T ss_dssp             HH-TTEECCCCSGGGEEECSS---------------------CEEECCCTTCEETTCCSCCCCCTTTSCTTHHHHCSCHH
T ss_pred             HH-CCCeecccChHHeEEeCC---------------------cEEEEecccchhcccCCccCCCccccCHHHHcCCCCCc
Confidence            99 799999999999999875                     5999999999987653 345688899999998877778


Q ss_pred             HHHHHHhhc
Q psy9184         492 FDMYRMMRK  500 (562)
Q Consensus       492 ~dIy~lm~~  500 (562)
                      .|||++.-.
T Consensus       257 sDi~slG~~  265 (681)
T 2pzi_A          257 TDIYTVGRT  265 (681)
T ss_dssp             HHHHHHHHH
T ss_pred             eehhhhHHH
Confidence            999986543

>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}

Probab=99.92  E-value=4.9e-25  Score=228.30  Aligned_cols=188  Identities=13%  Similarity=0.085  Sum_probs=131.1

Q ss_pred             CCCceeeeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCccccc
Q psy9184         261 SALKNCKKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTEL  334 (562)
Q Consensus       261 ~~y~~~~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~l  334 (562)
                      ++|++.+.||+|+||.||+|      +.||||++.....         ......+|+..++.++|               
T Consensus        23 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~---------~~~~~~~~~~~l~~l~h---------------   78 (360)
T 3e3p_A           23 DRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDPR---------FRNRELQIMQDLAVLHH---------------   78 (360)
T ss_dssp             TTEEEC----------CEEEEETTTCCEEEEEEEECCTT---------CCCHHHHHHHHHHHHCC---------------
T ss_pred             cceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEecCcc---------ccHHHHHHHHHHHhcCC---------------
Confidence            67999999999999999999      7899999875431         11245677888888888               


Q ss_pred             ccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCcccc-------ccCCHHHHHHHHHHHHH
Q psy9184         335 LKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDI-------KYRSPNQTYAMILQVVF  407 (562)
Q Consensus       335 ~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l-------~~l~e~~i~~I~~QIl~  407 (562)
                                 |||++++++|......      ......+|+||||+.++ +...+       ..+++..++.++.||+.
T Consensus        79 -----------~niv~~~~~~~~~~~~------~~~~~~~~lv~e~~~~~-l~~~~~~~~~~~~~~~~~~~~~~~~qi~~  140 (360)
T 3e3p_A           79 -----------PNIVQLQSYFYTLGER------DRRDIYLNVVMEYVPDT-LHRCCRNYYRRQVAPPPILIKVFLFQLIR  140 (360)
T ss_dssp             -----------TTBCCEEEEEEEECSS------CTTCEEEEEEEECCSCB-HHHHHHHHHTTTCCCCHHHHHHHHHHHHH
T ss_pred             -----------CCcccHHHhhhccccc------cccceeEEEEeeccccc-HHHHHHHHhhcccCCCHHHHHHHHHHHHH
Confidence                       9999999888653210      01133489999999864 33322       24889999999999999


Q ss_pred             HHHHHH--hhCCeEeccCCCCCEEEcc-CCCCCcccccCCcccccccCCceEEEEeccceeeecCC----cEEEeecCCC
Q psy9184         408 SLAVAE--VELEFEHRDLHMSNILVLQ-TDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVGE----KICYYDLSQD  480 (562)
Q Consensus       408 aL~yLH--~~~~IiHRDLKpeNILl~~-~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~~----g~v~~~l~~~  480 (562)
                      ||.|||  + .||+||||||+|||++. ++                    .+||+|||+|+.....    ...++..|++
T Consensus       141 al~~lH~~~-~~ivH~Dlkp~NIll~~~~~--------------------~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~a  199 (360)
T 3e3p_A          141 SIGCLHLPS-VNVCHRDIKPHNVLVNEADG--------------------TLKLCDFGSAKKLSPSEPNVAYICSRYYRA  199 (360)
T ss_dssp             HHHHHTSTT-TCCBCSCCCGGGEEEETTTT--------------------EEEECCCTTCBCCCTTSCCCSTTSCGGGCC
T ss_pred             HHHHHhCCC-CCeecCcCCHHHEEEeCCCC--------------------cEEEeeCCCceecCCCCCcccccCCcceeC
Confidence            999999  8 79999999999999987 44                    8999999999876542    2334778999


Q ss_pred             ccccCCC--CCcHHHHHHHhhcccCCCCCCCCCC
Q psy9184         481 EELFEGE--GDYQFDMYRMMRKQCQNNWQNFTPK  512 (562)
Q Consensus       481 pelF~g~--~~~q~dIy~lm~~~~~~~W~~~~P~  512 (562)
                      ||++.+.  .....|||++.-... ..+.+..|+
T Consensus       200 PE~~~~~~~~~~~~Di~slG~il~-ell~g~~pf  232 (360)
T 3e3p_A          200 PELIFGNQHYTTAVDIWSVGCIFA-EMMLGEPIF  232 (360)
T ss_dssp             HHHHTTCSSCCTHHHHHHHHHHHH-HHHHSSCSS
T ss_pred             HHHHcCCCCCCcHHHHHHHHHHHH-HHHhCCCCc
Confidence            9988664  466799988544332 333344444

>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B

Probab=99.92  E-value=8.7e-25  Score=223.03  Aligned_cols=189  Identities=17%  Similarity=0.241  Sum_probs=143.1

Q ss_pred             CCCceeeeeeccCceEEEEE-------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhc---CCccccCCCCCCc
Q psy9184         261 SALKNCKKIGEGVYGEVFKL-------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKET---SDLQYRTENSTPC  330 (562)
Q Consensus       261 ~~y~~~~~LG~GsfG~Vyka-------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L---~h~~~~~~n~~p~  330 (562)
                      .+|++.+.||+|+||.||+|       +.||+|++......      ......+.+|+.+++.+   .|           
T Consensus        11 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~------~~~~~~~~~e~~~l~~l~~~~h-----------   73 (326)
T 1blx_A           11 QQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGE------EGMPLSTIREVAVLRHLETFEH-----------   73 (326)
T ss_dssp             GTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCT------TSCBCTHHHHHHHHHHHHHTCC-----------
T ss_pred             hceeeeeeecccccEEEEEEEecCCCCEEEEEEEeccCccc------ccCCchhhHHHHHHHhhhccCC-----------
Confidence            67999999999999999999       57999999864311      11112456788877777   56           


Q ss_pred             ccccccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc-----cCCHHHHHHHHHHH
Q psy9184         331 FTELLKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK-----YRSPNQTYAMILQV  405 (562)
Q Consensus       331 fv~l~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~-----~l~e~~i~~I~~QI  405 (562)
                                     |||+++++++....        ......+|+||||+. |++.+.+.     .+++..++.++.||
T Consensus        74 ---------------~~i~~~~~~~~~~~--------~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~~~~qi  129 (326)
T 1blx_A           74 ---------------PNVVRLFDVCTVSR--------TDRETKLTLVFEHVD-QDLTTYLDKVPEPGVPTETIKDMMFQL  129 (326)
T ss_dssp             ---------------TTBCCEEEEEEEEE--------CSSEEEEEEEEECCS-CBHHHHHHHSCTTCSCHHHHHHHHHHH
T ss_pred             ---------------CCeEeeeeeeeecc--------cCCCceEEEEEecCC-CCHHHHHHhcccCCCCHHHHHHHHHHH
Confidence                           99999998876311        012457999999998 56655543     28899999999999


Q ss_pred             HHHHHHHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecC----CcEEEeecCCCc
Q psy9184         406 VFSLAVAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVG----EKICYYDLSQDE  481 (562)
Q Consensus       406 l~aL~yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~----~g~v~~~l~~~p  481 (562)
                      +.||.|||+ .||+||||||+|||++.++                    .+||+|||+++....    ....++..|++|
T Consensus       130 ~~~l~~lH~-~gi~H~dlkp~Nili~~~~--------------------~~kl~Dfg~~~~~~~~~~~~~~~~~~~y~aP  188 (326)
T 1blx_A          130 LRGLDFLHS-HRVVHRDLKPQNILVTSSG--------------------QIKLADFGLARIYSFQMALTSVVVTLWYRAP  188 (326)
T ss_dssp             HHHHHHHHH-TTCCCCCCCGGGEEECTTC--------------------CEEECSCCSCCCCCGGGGGCCCCCCCTTCCH
T ss_pred             HHHHHHHHH-CCceeccCCHHHeEEcCCC--------------------CEEEecCcccccccCCCCccccccccceeCH
Confidence            999999999 7999999999999998886                    799999999987643    234557789999


Q ss_pred             cccCC-CCCcHHHHHHHhhcccCCCCCCCCCC
Q psy9184         482 ELFEG-EGDYQFDMYRMMRKQCQNNWQNFTPK  512 (562)
Q Consensus       482 elF~g-~~~~q~dIy~lm~~~~~~~W~~~~P~  512 (562)
                      |++.+ ......|||++.-... ..+.+..|+
T Consensus       189 E~~~~~~~~~~~Di~slG~il~-~l~~g~~pf  219 (326)
T 1blx_A          189 EVLLQSSYATPVDLWSVGCIFA-EMFRRKPLF  219 (326)
T ss_dssp             HHHTTCCCCTHHHHHHHHHHHH-HHHHSSCSC
T ss_pred             HHHhcCCCCcchhHHHHHHHHH-HHHcCCCCC
Confidence            98876 4566799988644332 333444444

>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}

Probab=99.92  E-value=1.8e-24  Score=236.15  Aligned_cols=171  Identities=16%  Similarity=0.195  Sum_probs=137.0

Q ss_pred             CCCceeeeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCccccc
Q psy9184         261 SALKNCKKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTEL  334 (562)
Q Consensus       261 ~~y~~~~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~l  334 (562)
                      ++|++.++||+|+||.||+|      +.||||++.....          ...+.+|+.+++.|.|               
T Consensus         7 ~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~----------~~~~~~E~~il~~L~~---------------   61 (483)
T 3sv0_A            7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK----------HPQLLYESKIYRILQG---------------   61 (483)
T ss_dssp             TTEECCCCCEECSSCEEEEEEETTTCCEEEEEEEETTCS----------SCCHHHHHHHHHHTTT---------------
T ss_pred             CcEEEEEEEeeCCCEEEEEEEECCCCcEEEEEEeccccc----------cHHHHHHHHHHHHhcC---------------
Confidence            67999999999999999999      7899999886531          1246789999999998               


Q ss_pred             ccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc----cCCHHHHHHHHHHHHHHHH
Q psy9184         335 LKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK----YRSPNQTYAMILQVVFSLA  410 (562)
Q Consensus       335 ~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~----~l~e~~i~~I~~QIl~aL~  410 (562)
                                ++++..+..++..             .+..||||||+ +|++.+.+.    .+++.+++.|+.||+.||.
T Consensus        62 ----------~~~i~~i~~~~~~-------------~~~~~lvme~~-g~sL~~ll~~~~~~l~~~~~~~i~~qi~~aL~  117 (483)
T 3sv0_A           62 ----------GTGIPNVRWFGVE-------------GDYNVLVMDLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVE  117 (483)
T ss_dssp             ----------STTCCCEEEEEEE-------------TTEEEEEEECC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHH
T ss_pred             ----------CCCCCeEEEEEee-------------CCEEEEEEECC-CCCHHHHHHhhcCCCCHHHHHHHHHHHHHHHH
Confidence                      4555554444332             55889999999 787766654    4899999999999999999


Q ss_pred             HHHhhCCeEeccCCCCCEEEc---cCCCCCcccccCCcccccccCCceEEEEeccceeeecCC------------cEEEe
Q psy9184         411 VAEVELEFEHRDLHMSNILVL---QTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVGE------------KICYY  475 (562)
Q Consensus       411 yLH~~~~IiHRDLKpeNILl~---~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~~------------g~v~~  475 (562)
                      |||+ .||+||||||+||||.   ..+                    .+||+|||+|+.....            ...++
T Consensus       118 yLH~-~gIvHrDIKP~NILl~~~~~~~--------------------~vkL~DFGla~~~~~~~~~~~~~~~~~~~~~gt  176 (483)
T 3sv0_A          118 FVHS-KSFLHRDIKPDNFLMGLGRRAN--------------------QVYIIDFGLAKKYRDTSTHQHIPYRENKNLTGT  176 (483)
T ss_dssp             HHHH-TTEECCCCCGGGEEECCGGGTT--------------------CEEECCCTTCEECBCTTTCCBCCCCCCCCCCSC
T ss_pred             HHHH-CCEeecccCcceEEEecCCCCC--------------------eEEEEeCCcceeccCCccccccccccccccCCC
Confidence            9999 7999999999999994   443                    7999999999987642            34567


Q ss_pred             ecCCCccccCCC-CCcHHHHHHHhhcc
Q psy9184         476 DLSQDEELFEGE-GDYQFDMYRMMRKQ  501 (562)
Q Consensus       476 ~l~~~pelF~g~-~~~q~dIy~lm~~~  501 (562)
                      ..|++||++.+. .....|||++.-..
T Consensus       177 ~~Y~aPE~~~~~~~s~~sDvwSlGvil  203 (483)
T 3sv0_A          177 ARYASVNTHLGIEQSRRDDLESLGYVL  203 (483)
T ss_dssp             TTTCCHHHHTTCCCCHHHHHHHHHHHH
T ss_pred             ccccCHHHhcCCCCChHHHHHHHHHHH
Confidence            789999988874 55668998864433

>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*

Probab=99.92  E-value=5.4e-25  Score=248.72  Aligned_cols=172  Identities=22%  Similarity=0.199  Sum_probs=141.3

Q ss_pred             CCCCceeeeeeccCceEEEEE---------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCc
Q psy9184         260 SSALKNCKKIGEGVYGEVFKL---------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPC  330 (562)
Q Consensus       260 ~~~y~~~~~LG~GsfG~Vyka---------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~  330 (562)
                      .++|++.+.||+|+||.||+|         ..||+|++....       .....+.+.+|+.+++.++|           
T Consensus       389 ~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~~-------~~~~~~~~~~E~~~l~~l~H-----------  450 (656)
T 2j0j_A          389 RERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCT-------SDSVREKFLQEALTMRQFDH-----------  450 (656)
T ss_dssp             GGGEEEEEEEECCSSCCEEEEEECCSSSCCEEEEEEECSSTT-------CHHHHHHHHHHHHHHHHCCC-----------
T ss_pred             cccEEEeeEEeeCCCEEEEEEEEecCCCccEEEEEEEecccC-------CHHHHHHHHHHHHHHHhCCC-----------
Confidence            467899999999999999999         358999887532       23445678999999999998           


Q ss_pred             ccccccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc----cCCHHHHHHHHHHHH
Q psy9184         331 FTELLKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK----YRSPNQTYAMILQVV  406 (562)
Q Consensus       331 fv~l~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~----~l~e~~i~~I~~QIl  406 (562)
                                     |||+++++++.              ++.+|+||||+.+|++.+.+.    .+++..+..++.||+
T Consensus       451 ---------------pnIv~l~~~~~--------------~~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~  501 (656)
T 2j0j_A          451 ---------------PHIVKLIGVIT--------------ENPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLS  501 (656)
T ss_dssp             ---------------TTBCCEEEEEC--------------SSSCEEEEECCTTCBHHHHHHHTTTTCCHHHHHHHHHHHH
T ss_pred             ---------------CCCCeEEEEEe--------------cCceEEEEEcCCCCcHHHHHHhccCCCCHHHHHHHHHHHH
Confidence                           99999998874              346899999999998877664    388999999999999


Q ss_pred             HHHHHHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecCC------cEEEeecCCC
Q psy9184         407 FSLAVAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVGE------KICYYDLSQD  480 (562)
Q Consensus       407 ~aL~yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~~------g~v~~~l~~~  480 (562)
                      .||.|||+ .||+||||||+|||++.++                    .+||+|||+|+.....      ....+..|++
T Consensus       502 ~aL~~LH~-~givHrDikp~NILl~~~~--------------------~vkL~DFG~a~~~~~~~~~~~~~~~~t~~y~a  560 (656)
T 2j0j_A          502 TALAYLES-KRFVHRDIAARNVLVSSND--------------------CVKLGDFGLSRYMEDSTYYKASKGKLPIKWMA  560 (656)
T ss_dssp             HHHHHHHH-TTCCCSCCSGGGEEEEETT--------------------EEEECCCCCCCSCCC----------CCGGGCC
T ss_pred             HHHHHHHh-CCccccccchHhEEEeCCC--------------------CEEEEecCCCeecCCCcceeccCCCCCcceeC
Confidence            99999999 7999999999999999886                    7999999999876542      1223457999


Q ss_pred             ccccCC-CCCcHHHHHHHhh
Q psy9184         481 EELFEG-EGDYQFDMYRMMR  499 (562)
Q Consensus       481 pelF~g-~~~~q~dIy~lm~  499 (562)
                      ||++.+ ..+...|||++.-
T Consensus       561 PE~~~~~~~~~~~DiwSlG~  580 (656)
T 2j0j_A          561 PESINFRRFTSASDVWMFGV  580 (656)
T ss_dssp             HHHHHHCCCCHHHHHHHHHH
T ss_pred             HHHhcCCCCCchhhHHHHHH
Confidence            998876 4566699988643

>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}

Probab=99.92  E-value=6.5e-25  Score=222.89  Aligned_cols=172  Identities=23%  Similarity=0.314  Sum_probs=123.9

Q ss_pred             CCCceeeeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCccccc
Q psy9184         261 SALKNCKKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTEL  334 (562)
Q Consensus       261 ~~y~~~~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~l  334 (562)
                      ++|++.+.||+|+||.||+|      +.||||++....      ......+.+..+..+++.++|               
T Consensus        25 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~------~~~~~~~~~~~~~~~~~~~~h---------------   83 (318)
T 2dyl_A           25 NDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSG------NKEENKRILMDLDVVLKSHDC---------------   83 (318)
T ss_dssp             GGEEEEEEC------CEEEEEETTTCCEEEEEEEETTS------CHHHHHHHHHHHHHHHHTTTC---------------
T ss_pred             ccccccceeeecCCeeEEEEEEecCCeEEEEEEecccc------cchHHHHHHHHHHHHHHhcCC---------------
Confidence            67899999999999999999      789999998653      122222334444556777777               


Q ss_pred             ccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc-----cCCHHHHHHHHHHHHHHH
Q psy9184         335 LKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK-----YRSPNQTYAMILQVVFSL  409 (562)
Q Consensus       335 ~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~-----~l~e~~i~~I~~QIl~aL  409 (562)
                                 |||+++++++..             ++.+|+||||+  |.++..+.     .+++..++.++.||+.||
T Consensus        84 -----------~~i~~~~~~~~~-------------~~~~~lv~e~~--~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~l  137 (318)
T 2dyl_A           84 -----------PYIVQCFGTFIT-------------NTDVFIAMELM--GTCAEKLKKRMQGPIPERILGKMTVAIVKAL  137 (318)
T ss_dssp             -----------TTBCCEEEEEEC-------------SSEEEEEECCC--SEEHHHHHHHHTSCCCHHHHHHHHHHHHHHH
T ss_pred             -----------CceeeEEEEEec-------------CCcEEEEEecc--CCcHHHHHHHhccCCCHHHHHHHHHHHHHHH
Confidence                       999999998875             55899999999  34444432     489999999999999999


Q ss_pred             HHHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecC----CcEEEeecCCCccccC
Q psy9184         410 AVAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVG----EKICYYDLSQDEELFE  485 (562)
Q Consensus       410 ~yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~----~g~v~~~l~~~pelF~  485 (562)
                      .|||+++||+||||||+|||++.++                    .+||+|||+++....    ....++..|++||++.
T Consensus       138 ~~lH~~~~i~H~dlkp~Nil~~~~~--------------------~~kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~  197 (318)
T 2dyl_A          138 YYLKEKHGVIHRDVKPSNILLDERG--------------------QIKLCDFGISGRLVDDKAKDRSAGCAAYMAPERID  197 (318)
T ss_dssp             HHHHHHHCCCCCCCCGGGEEECTTS--------------------CEEECCCTTC--------------CCTTCCHHHHC
T ss_pred             HHHHhhCCEEeCCCCHHHEEECCCC--------------------CEEEEECCCchhccCCccccccCCCccccChhhcc
Confidence            9999834999999999999998876                    799999999976643    2345677899999985


Q ss_pred             C------CCCcHHHHHHHhh
Q psy9184         486 G------EGDYQFDMYRMMR  499 (562)
Q Consensus       486 g------~~~~q~dIy~lm~  499 (562)
                      +      ..+...|||++.-
T Consensus       198 ~~~~~~~~~~~~~Di~slG~  217 (318)
T 2dyl_A          198 PPDPTKPDYDIRADVWSLGI  217 (318)
T ss_dssp             --------CCTHHHHHHHHH
T ss_pred             cccccccCCccccchhhHHH
Confidence            3      3456699988643

>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*

Probab=99.92  E-value=3.3e-26  Score=254.70  Aligned_cols=168  Identities=15%  Similarity=0.073  Sum_probs=119.8

Q ss_pred             eeeccCceEEEEE------eeEEEEEeecCCCCCC--cchhHHHHHHHHHHHHHHHhcCCccccCCCCCCcccccccccc
Q psy9184         268 KIGEGVYGEVFKL------NNSVIKIMPIEGDQSV--NGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTELLKCSC  339 (562)
Q Consensus       268 ~LG~GsfG~Vyka------~~vAIKii~~~~~~~~--~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~l~~~~i  339 (562)
                      .++.|++|.+..+      +.||+|++........  ....+...+++.+|+.+|+++.+                    
T Consensus       241 ~~~~~~~~~h~~~rr~~fg~~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~~~~--------------------  300 (569)
T 4azs_A          241 QPYAGAGLAHKRSRRYFFGEDYVCKFFYYDMPHGILTAEESQRNKYELHNEIKFLTQPPA--------------------  300 (569)
T ss_dssp             C-C--------CCEEEEECSSEEEEEEESSCSTTCSCHHHHHHHHHHHHHHHHHHHSCCT--------------------
T ss_pred             ccccCCcccccccccccccceeEEEEEecccccccchhhhhHHHHHHHHHHHHHHHhcCC--------------------
Confidence            3455555554443      8999999987642211  22334556789999999999976                    


Q ss_pred             cCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCcccccc---CCHHHHHHHHHHHHHHHHHHHhhC
Q psy9184         340 VRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIKY---RSPNQTYAMILQVVFSLAVAEVEL  416 (562)
Q Consensus       340 v~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~~---l~e~~i~~I~~QIl~aL~yLH~~~  416 (562)
                           |+||+++++++++             ++.+|||||||+||+|.+.+..   +++   ..|+.||+.||+|||+ +
T Consensus       301 -----~~~i~~~~~~~ed-------------~~~~yLVMEyv~G~~L~d~i~~~~~l~~---~~I~~QIl~AL~ylH~-~  358 (569)
T 4azs_A          301 -----GFDAPAVLAHGEN-------------AQSGWLVMEKLPGRLLSDMLAAGEEIDR---EKILGSLLRSLAALEK-Q  358 (569)
T ss_dssp             -----TCCCCCEEEEEEC-------------SSEEEEEEECCCSEEHHHHHHTTCCCCH---HHHHHHHHHHHHHHHH-T
T ss_pred             -----CCCeeEEEEEEEE-------------CCEEEEEEecCCCCcHHHHHHhCCCCCH---HHHHHHHHHHHHHHHH-C
Confidence                 6999999999986             6699999999999999888764   544   4589999999999999 7


Q ss_pred             CeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecC-----CcEEEeecCCCccccCCCCCcH
Q psy9184         417 EFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVG-----EKICYYDLSQDEELFEGEGDYQ  491 (562)
Q Consensus       417 ~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~-----~g~v~~~l~~~pelF~g~~~~q  491 (562)
                      |||||||||+|||++.++                    .+||+|||+|+....     .+.+++..|++||++.|...+.
T Consensus       359 GIIHRDIKPeNILL~~dg--------------------~vKL~DFGlAr~~~~~~~~~~t~vGTp~YmAPE~l~g~~~~~  418 (569)
T 4azs_A          359 GFWHDDVRPWNVMVDARQ--------------------HARLIDFGSIVTTPQDCSWPTNLVQSFFVFVNELFAENKSWN  418 (569)
T ss_dssp             TCEESCCCGGGEEECTTS--------------------CEEECCCTTEESCC---CCSHHHHHHHHHHHHHHC-------
T ss_pred             CceeccCchHhEEECCCC--------------------CEEEeecccCeeCCCCCccccCceechhhccHHHhCCCCCCc
Confidence            999999999999999887                    799999999997654     2346788899999999877666


Q ss_pred             HHHHHH
Q psy9184         492 FDMYRM  497 (562)
Q Consensus       492 ~dIy~l  497 (562)
                      .|+|..
T Consensus       419 ~d~~s~  424 (569)
T 4azs_A          419 GFWRSA  424 (569)
T ss_dssp             ------
T ss_pred             cccccc
Confidence            777654

>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*

Probab=99.91  E-value=2.4e-25  Score=228.11  Aligned_cols=172  Identities=20%  Similarity=0.262  Sum_probs=123.1

Q ss_pred             CCCCCceeeeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHH-HHHhcCCccccCCCCCCcc
Q psy9184         259 PSSALKNCKKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIM-VTKETSDLQYRTENSTPCF  331 (562)
Q Consensus       259 ~~~~y~~~~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~-ilk~L~h~~~~~~n~~p~f  331 (562)
                      ..++|++.+.||+|+||.||+|      +.||||++....       .......+..|+. +++.++|            
T Consensus        20 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~-------~~~~~~~~~~e~~~~~~~~~h------------   80 (327)
T 3aln_A           20 TAEDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTV-------DEKEQKQLLMDLDVVMRSSDC------------   80 (327)
T ss_dssp             CSCSEEC-CEEEECSSEEEEEEEETTTTEEEEEEEEECCC-------CHHHHHHHHHHHHHHHSSCCC------------
T ss_pred             CHHHhhehheeccCCCEEEEEEEEcCCCCEEEEEEeeccc-------CchHHHHHHHHHHHHHHcCCC------------
Confidence            4578999999999999999999      789999998653       1233345666766 5666666            


Q ss_pred             cccccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCcccc--------ccCCHHHHHHHHH
Q psy9184         332 TELLKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDI--------KYRSPNQTYAMIL  403 (562)
Q Consensus       332 v~l~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l--------~~l~e~~i~~I~~  403 (562)
                                    |||+++++++..             ++..|+||||+.+ ++.+.+        ..+++..+..++.
T Consensus        81 --------------~niv~~~~~~~~-------------~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~  132 (327)
T 3aln_A           81 --------------PYIVQFYGALFR-------------EGDCWICMELMST-SFDKFYKYVYSVLDDVIPEEILGKITL  132 (327)
T ss_dssp             --------------TTBCCEEEEEEC-------------SSEEEEEECCCSE-EHHHHHHHHHHTTCCCCCHHHHHHHHH
T ss_pred             --------------CcEeeeeeEEEe-------------CCceEEEEeecCC-ChHHHHHHHHhhhcccCcHHHHHHHHH
Confidence                          999999998875             5589999999985 443333        2378999999999


Q ss_pred             HHHHHHHHHHhhC-CeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecC----CcEEEeecC
Q psy9184         404 QVVFSLAVAEVEL-EFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVG----EKICYYDLS  478 (562)
Q Consensus       404 QIl~aL~yLH~~~-~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~----~g~v~~~l~  478 (562)
                      |++.||.|||+ . ||+||||||+|||++.++                    .+||+|||+++....    ....++..|
T Consensus       133 ~i~~~l~~lH~-~~~ivH~dlkp~NIll~~~~--------------------~~kl~Dfg~~~~~~~~~~~~~~~gt~~y  191 (327)
T 3aln_A          133 ATVKALNHLKE-NLKIIHRDIKPSNILLDRSG--------------------NIKLCDFGISGQLVDSIAKTRDAGCRPY  191 (327)
T ss_dssp             HHHHHHHHHHH-HHSCCCSCCCGGGEEEETTT--------------------EEEECCCSSSCC----------------
T ss_pred             HHHHHHHHHhc-cCCEeECCCCHHHEEEcCCC--------------------CEEEccCCCceecccccccccCCCCccc
Confidence            99999999999 6 999999999999998876                    799999999987654    223567789


Q ss_pred             CCccccCC-----CCCcHHHHHHHh
Q psy9184         479 QDEELFEG-----EGDYQFDMYRMM  498 (562)
Q Consensus       479 ~~pelF~g-----~~~~q~dIy~lm  498 (562)
                      ++||++.+     ..+...|||++.
T Consensus       192 ~aPE~~~~~~~~~~~~~~~Di~slG  216 (327)
T 3aln_A          192 MAPERIDPSASRQGYDVRSDVWSLG  216 (327)
T ss_dssp             --------------CCSHHHHHHHH
T ss_pred             cCceeeccccCcCCCCchhhHHHHH
Confidence            99999842     345679998863

>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*

Probab=99.91  E-value=1.7e-24  Score=224.13  Aligned_cols=232  Identities=16%  Similarity=0.199  Sum_probs=140.9

Q ss_pred             CCCceee-eeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHH-HHHhcCCccccCCCCCCccc
Q psy9184         261 SALKNCK-KIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIM-VTKETSDLQYRTENSTPCFT  332 (562)
Q Consensus       261 ~~y~~~~-~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~-ilk~L~h~~~~~~n~~p~fv  332 (562)
                      ++|.+.+ .||+|+||.||+|      +.||||++....             ...+|+. .++.+.|             
T Consensus        28 ~~y~i~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~-------------~~~~e~~~~~~~~~h-------------   81 (336)
T 3fhr_A           28 DDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDSP-------------KARQEVDHHWQASGG-------------   81 (336)
T ss_dssp             GTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESSH-------------HHHHHHHHHHHHTTS-------------
T ss_pred             ceeEecceeeeeCCCeEEEEEEECCCCCEEEEEEecCcH-------------HHHHHHHHHHHhcCC-------------
Confidence            6788865 6999999999999      799999997531             1223333 3455565             


Q ss_pred             ccccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc-----cCCHHHHHHHHHHHHH
Q psy9184         333 ELLKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK-----YRSPNQTYAMILQVVF  407 (562)
Q Consensus       333 ~l~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~-----~l~e~~i~~I~~QIl~  407 (562)
                                   |||++++++|....         .....+|+||||+.||++.+.+.     .+++.+++.++.||+.
T Consensus        82 -------------~~i~~~~~~~~~~~---------~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~ql~~  139 (336)
T 3fhr_A           82 -------------PHIVCILDVYENMH---------HGKRCLLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGT  139 (336)
T ss_dssp             -------------TTBCCEEEEEEEEE---------TTEEEEEEEEECCTTEEHHHHHHTC-CCCCBHHHHHHHHHHHHH
T ss_pred             -------------CChHHHHHHHhhcc---------CCCceEEEEEeccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHH
Confidence                         99999999886522         01346899999999998877663     3899999999999999


Q ss_pred             HHHHHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecC---CcEEEeecCCCcccc
Q psy9184         408 SLAVAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVG---EKICYYDLSQDEELF  484 (562)
Q Consensus       408 aL~yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~---~g~v~~~l~~~pelF  484 (562)
                      ||.|||+ .||+||||||+|||++.++..                 ..+||+|||+++....   ....++..|++||++
T Consensus       140 ~l~~LH~-~~ivH~dlkp~NIll~~~~~~-----------------~~~kl~Dfg~~~~~~~~~~~~~~~t~~y~aPE~~  201 (336)
T 3fhr_A          140 AIQFLHS-HNIAHRDVKPENLLYTSKEKD-----------------AVLKLTDFGFAKETTQNALQTPCYTPYYVAPEVL  201 (336)
T ss_dssp             HHHHHHH-TTEECSCCSGGGEEESCSSTT-----------------CCEEECCCTTCEEC--------------------
T ss_pred             HHHHHHh-CCeecCCCCHHHEEEEecCCC-----------------ceEEEeccccceeccccccccCCCCcCccChhhh
Confidence            9999999 799999999999999875421                 2699999999987654   334567889999998


Q ss_pred             CCC-CCcHHHHHHHhhcccCCCCCCCCCCChhh---hHHHHHHHHhhcccCCCCCCCchhHHHHHHHHHHHhcCCCcCcC
Q psy9184         485 EGE-GDYQFDMYRMMRKQCQNNWQNFTPKNNVF---WIHYLVDKATCLKKGYQYLRAPRHQAFELLEELGQNALHFDSCY  560 (562)
Q Consensus       485 ~g~-~~~q~dIy~lm~~~~~~~W~~~~P~tn~~---wl~yl~~~Ll~~~~~~~~~~~~~~~~~~~l~~l~~~~l~~~s~~  560 (562)
                      .+. .+...|||++.-... ..+.+..|+....   ........+......++.+.  ....-..+.+|.+.+|.++...
T Consensus       202 ~~~~~~~~~Di~slG~il~-~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~li~~~L~~dP~~  278 (336)
T 3fhr_A          202 GPEKYDKSCDMWSLGVIMY-ILLCGFPPFYSNTGQAISPGMKRRIRLGQYGFPNPE--WSEVSEDAKQLIRLLLKTDPTE  278 (336)
T ss_dssp             --CHHHHHHHHHHHHHHHH-HHHHSSCCC---------------------CCCTTT--STTCCHHHHHHHHHHSCSSGGG
T ss_pred             CCCCCCchhhHHHHHHHHH-HHHHCCCCCCCccchhhhhhHHHhhhccccccCchh--hccCCHHHHHHHHHHCCCChhH
Confidence            653 445589988644332 2233344442111   00111111111011122111  1112346778889999888766


Q ss_pred             C
Q psy9184         561 E  561 (562)
Q Consensus       561 ~  561 (562)
                      |
T Consensus       279 R  279 (336)
T 3fhr_A          279 R  279 (336)
T ss_dssp             S
T ss_pred             C
Confidence            5

>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}

Probab=99.91  E-value=1.5e-24  Score=224.90  Aligned_cols=243  Identities=11%  Similarity=0.007  Sum_probs=160.6

Q ss_pred             CCCCceeeeeeccCceEEEEE---------eeEEEEEeecCCCCCCcc---hhHHHHHHHHHHHHHHHhcCCccccCCCC
Q psy9184         260 SSALKNCKKIGEGVYGEVFKL---------NNSVIKIMPIEGDQSVNG---EEQKKFREIFSEIMVTKETSDLQYRTENS  327 (562)
Q Consensus       260 ~~~y~~~~~LG~GsfG~Vyka---------~~vAIKii~~~~~~~~~~---~~~~~~~~il~Ei~ilk~L~h~~~~~~n~  327 (562)
                      .++|++.+.||+|+||.||+|         ..+|+|++.........+   ........+.+|+.+++.++|        
T Consensus        36 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h--------  107 (345)
T 2v62_A           36 GNQWVLGKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQLDY--------  107 (345)
T ss_dssp             SCEEEEEEEC------CEEEEEESSSCGGGCCEEEEEEECC-CHHHHHHHHHHHHCCHHHHHHHHHHHTCSC--------
T ss_pred             CceEEEEeeEeecCCeEEEEEEecCCCCccceEEEEeeecCCcchHHHHHHHHHHhhhHHHHHHHhhccccc--------
Confidence            467999999999999999999         579999988653100000   000112346678888888887        


Q ss_pred             CCcccccccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc---cCCHHHHHHHHHH
Q psy9184         328 TPCFTELLKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK---YRSPNQTYAMILQ  404 (562)
Q Consensus       328 ~p~fv~l~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~---~l~e~~i~~I~~Q  404 (562)
                                        |||+++++++....         .....+|+||||+ ||++.+.+.   .+++.+++.++.|
T Consensus       108 ------------------~ni~~~~~~~~~~~---------~~~~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~i~~q  159 (345)
T 2v62_A          108 ------------------LGIPLFYGSGLTEF---------KGRSYRFMVMERL-GIDLQKISGQNGTFKKSTVLQLGIR  159 (345)
T ss_dssp             ------------------CCCCCEEEEEEEES---------SSCEEEEEEEECE-EEEHHHHCBGGGBCCHHHHHHHHHH
T ss_pred             ------------------cCcceeeccccccc---------CCCcEEEEEEecc-CCCHHHHHHhcCCCCHHHHHHHHHH
Confidence                              99999998886521         1245899999999 887766654   4899999999999


Q ss_pred             HHHHHHHHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecC------------CcE
Q psy9184         405 VVFSLAVAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVG------------EKI  472 (562)
Q Consensus       405 Il~aL~yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~------------~g~  472 (562)
                      |+.||.|||+ .||+||||||+|||++.++.                  ..+||+|||+|+....            ...
T Consensus       160 i~~aL~~LH~-~~ivH~Dlkp~NIll~~~~~------------------~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~  220 (345)
T 2v62_A          160 MLDVLEYIHE-NEYVHGDIKAANLLLGYKNP------------------DQVYLADYGLSYRYCPNGNHKQYQENPRKGH  220 (345)
T ss_dssp             HHHHHHHHHH-TTEECSCCSGGGEEEESSST------------------TSEEECCCTTCEESSGGGCCCCCCCCGGGCS
T ss_pred             HHHHHHHHHh-CCeeCCCcCHHHEEEccCCC------------------CcEEEEeCCCceecccccccccchhcccccc
Confidence            9999999999 79999999999999987752                  1699999999987643            223


Q ss_pred             EEeecCCCccccCCC-CCcHHHHHHHhhcccCCCCCCCCCCC----hhhhHHHHHHHHhhcccCCCCCCCc---hhHHHH
Q psy9184         473 CYYDLSQDEELFEGE-GDYQFDMYRMMRKQCQNNWQNFTPKN----NVFWIHYLVDKATCLKKGYQYLRAP---RHQAFE  544 (562)
Q Consensus       473 v~~~l~~~pelF~g~-~~~q~dIy~lm~~~~~~~W~~~~P~t----n~~wl~yl~~~Ll~~~~~~~~~~~~---~~~~~~  544 (562)
                      .++..|++||++.+. .+...|||++.-... ..+.+..|+.    +...+......+..   .++.....   ....-.
T Consensus       221 ~gt~~y~aPE~~~~~~~~~~~Di~slG~il~-ell~g~~pf~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~  296 (345)
T 2v62_A          221 NGTIEFTSLDAHKGVALSRRSDVEILGYCML-RWLCGKLPWEQNLKDPVAVQTAKTNLLD---ELPQSVLKWAPSGSSCC  296 (345)
T ss_dssp             CSCTTTCCHHHHHTCCCCHHHHHHHHHHHHH-HHHHSSCTTGGGTTCHHHHHHHHHHHHH---TTTHHHHHHSCTTSCCH
T ss_pred             CCCccccCHHHhcCCCCCchhhHHHHHHHHH-HHHhCCCCccccccccHHHHHHHHhhcc---cccHHHHhhccccccHH
Confidence            457789999998875 566799988643332 3344455552    22223333333222   11110000   000123


Q ss_pred             HHHHHHHhcCCCcCcCC
Q psy9184         545 LLEELGQNALHFDSCYE  561 (562)
Q Consensus       545 ~l~~l~~~~l~~~s~~~  561 (562)
                      .+.+|...+|.++...|
T Consensus       297 ~l~~li~~~l~~dp~~R  313 (345)
T 2v62_A          297 EIAQFLVCAHSLAYDEK  313 (345)
T ss_dssp             HHHHHHHHHHTCCTTCC
T ss_pred             HHHHHHHHHhhcCcccC
Confidence            67888889988887665

>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A

Probab=99.91  E-value=2.4e-25  Score=225.90  Aligned_cols=163  Identities=10%  Similarity=0.006  Sum_probs=131.2

Q ss_pred             CCCCceeeeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCcccc
Q psy9184         260 SSALKNCKKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTE  333 (562)
Q Consensus       260 ~~~y~~~~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~  333 (562)
                      .++|++.+.||+|+||.||+|      +.||||++....     .......+.+.+|+.+++.++|              
T Consensus        30 ~~~y~i~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~-----~~~~~~~~~~~~e~~~l~~l~h--------------   90 (286)
T 3uqc_A           30 NGRYRLLIFHGGVPPLQFWQALDTALDRQVALTFVDPQG-----VLPDDVLQETLSRTLRLSRIDK--------------   90 (286)
T ss_dssp             TTTEEEEEEEEBSTTCEEEEEEETTTTEEEEEEESCTTC-----CSCHHHHHHHHHHHHHHHTCCC--------------
T ss_pred             cCcEEEEEEEcccCCeEEEEEEecCCCceEEEEEECccc-----ccCHHHHHHHHHHHHHHhcCCC--------------
Confidence            367999999999999999999      799999998654     2234455788999999999998              


Q ss_pred             cccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCcccccc-CCHHHHHHHHHHHHHHHHHH
Q psy9184         334 LLKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIKY-RSPNQTYAMILQVVFSLAVA  412 (562)
Q Consensus       334 l~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~~-l~e~~i~~I~~QIl~aL~yL  412 (562)
                                  |||+++++++..             ++..|+||||++||++.+.+.. ....++..++.||+.||.||
T Consensus        91 ------------p~iv~~~~~~~~-------------~~~~~lv~e~~~g~~L~~~l~~~~~~~~~~~i~~ql~~aL~~l  145 (286)
T 3uqc_A           91 ------------PGVARVLDVVHT-------------RAGGLVVAEWIRGGSLQEVADTSPSPVGAIRAMQSLAAAADAA  145 (286)
T ss_dssp             ------------TTBCCEEEEEEE-------------TTEEEEEEECCCEEEHHHHHTTCCCHHHHHHHHHHHHHHHHHH
T ss_pred             ------------CCcceeeEEEEE-------------CCcEEEEEEecCCCCHHHHHhcCCChHHHHHHHHHHHHHHHHH
Confidence                        999999999876             5589999999999877666643 56678899999999999999


Q ss_pred             HhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecC------CcEEEeecCCCccccCC
Q psy9184         413 EVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVG------EKICYYDLSQDEELFEG  486 (562)
Q Consensus       413 H~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~------~g~v~~~l~~~pelF~g  486 (562)
                      |+ .||+||||||+|||++.++                    .+||+++|.......      .||+++++.++..+|.+
T Consensus       146 H~-~givH~Dikp~NIll~~~g--------------------~~kl~~~~~~~~~~~~~Di~slG~il~elltg~~Pf~~  204 (286)
T 3uqc_A          146 HR-AGVALSIDHPSRVRVSIDG--------------------DVVLAYPATMPDANPQDDIRGIGASLYALLVNRWPLPE  204 (286)
T ss_dssp             HH-TTCCCCCCSGGGEEEETTS--------------------CEEECSCCCCTTCCHHHHHHHHHHHHHHHHHSEECSCC
T ss_pred             HH-CCCccCCCCcccEEEcCCC--------------------CEEEEeccccCCCCchhHHHHHHHHHHHHHHCCCCCCc
Confidence            99 7999999999999999887                    689987765432211      45555555555555555


Q ss_pred             C
Q psy9184         487 E  487 (562)
Q Consensus       487 ~  487 (562)
                      .
T Consensus       205 ~  205 (286)
T 3uqc_A          205 A  205 (286)
T ss_dssp             C
T ss_pred             C
Confidence            3

>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}

Probab=99.91  E-value=6.1e-26  Score=230.89  Aligned_cols=173  Identities=18%  Similarity=0.254  Sum_probs=136.7

Q ss_pred             CCCCCceeeeeeccCceEEEEE---eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCcccccc
Q psy9184         259 PSSALKNCKKIGEGVYGEVFKL---NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTELL  335 (562)
Q Consensus       259 ~~~~y~~~~~LG~GsfG~Vyka---~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~l~  335 (562)
                      ..++|++.+.||+|+||.||+|   ..+|+|++......      ....+.+.+|+.+++.++|                
T Consensus        31 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~avk~~~~~~~~------~~~~~~~~~e~~~l~~l~h----------------   88 (319)
T 2y4i_B           31 PFEQLEIGELIGKGRFGQVYHGRWHGEVAIRLIDIERDN------EDQLKAFKREVMAYRQTRH----------------   88 (319)
T ss_dssp             CCSCEECCCBCCCSSSSEEEEEEESSSEEEEECCCCSCC------CCCCCCCCTTGGGGTTCCC----------------
T ss_pred             CHHHeEEeeEeccCCceEEEEEEEcCeEEEEEeecCCCC------HHHHHHHHHHHHHHhcCCC----------------
Confidence            4578999999999999999999   78999999865321      1112345679999999988                


Q ss_pred             cccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc----cCCHHHHHHHHHHHHHHHHH
Q psy9184         336 KCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK----YRSPNQTYAMILQVVFSLAV  411 (562)
Q Consensus       336 ~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~----~l~e~~i~~I~~QIl~aL~y  411 (562)
                                |||+++++++.+             .+.+|+||||+.||++.+.+.    .+++.+++.++.||+.||.|
T Consensus        89 ----------~~iv~~~~~~~~-------------~~~~~iv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~  145 (319)
T 2y4i_B           89 ----------ENVVLFMGACMS-------------PPHLAIITSLCKGRTLYSVVRDAKIVLDVNKTRQIAQEIVKGMGY  145 (319)
T ss_dssp             ----------TTBCCCCEEEEC-------------SSCEEEECBCCCSEEHHHHTTSSCCCCCSHHHHHHHHHHHHHHHH
T ss_pred             ----------CCEeEEEEEEec-------------CCceEEEeecccCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHH
Confidence                      999999998875             457999999999987766664    38899999999999999999


Q ss_pred             HHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecC----------CcEEEeecCCCc
Q psy9184         412 AEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVG----------EKICYYDLSQDE  481 (562)
Q Consensus       412 LH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~----------~g~v~~~l~~~p  481 (562)
                      ||+ .||+||||||+|||++. +                    .++|+|||+++....          ....++..|++|
T Consensus       146 lH~-~~i~H~dlkp~NIl~~~-~--------------------~~~l~Dfg~~~~~~~~~~~~~~~~~~~~~g~~~y~aP  203 (319)
T 2y4i_B          146 LHA-KGILHKDLKSKNVFYDN-G--------------------KVVITDFGLFSISGVLQAGRREDKLRIQNGWLCHLAP  203 (319)
T ss_dssp             HHH-TTCCCCCCCSTTEEEC-----------------------CCEECCCSCCC----------CCSCBCCSGGGGTSCH
T ss_pred             HHh-CCccccCCChhhEEEeC-C--------------------CEEEeecCCccccccccccccccccccCCCcccccCh
Confidence            999 79999999999999973 3                    699999999876532          112245678999


Q ss_pred             cccCC----------CCCcHHHHHHHh
Q psy9184         482 ELFEG----------EGDYQFDMYRMM  498 (562)
Q Consensus       482 elF~g----------~~~~q~dIy~lm  498 (562)
                      |++.+          ......|||++.
T Consensus       204 E~~~~~~~~~~~~~~~~~~~~Di~slG  230 (319)
T 2y4i_B          204 EIIRQLSPDTEEDKLPFSKHSDVFALG  230 (319)
T ss_dssp             HHHSCBSCC--CCCSCCCHHHHHHHHH
T ss_pred             HHhhhccccccccccCCCchhhHHHHH
Confidence            98875          235568998864

>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*

Probab=99.90  E-value=6.6e-24  Score=227.83  Aligned_cols=239  Identities=17%  Similarity=0.145  Sum_probs=156.2

Q ss_pred             CCCceeeeeeccCceEEEEE-----eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCcccccc
Q psy9184         261 SALKNCKKIGEGVYGEVFKL-----NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTELL  335 (562)
Q Consensus       261 ~~y~~~~~LG~GsfG~Vyka-----~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~l~  335 (562)
                      +.|...+.||+|+||+||.+     +.||||++....           .+.+.+|+.+++.+.+                
T Consensus        15 ~~~~~~~~LG~G~~g~V~~~~~~~g~~vAvK~~~~~~-----------~~~~~~E~~~l~~l~~----------------   67 (434)
T 2rio_A           15 NLVVSEKILGYGSSGTVVFQGSFQGRPVAVKRMLIDF-----------CDIALMEIKLLTESDD----------------   67 (434)
T ss_dssp             SCEEEEEEEEECSTTCEEEEEESSSSEEEEEEEEGGG-----------HHHHHHHHHHHHHHTT----------------
T ss_pred             heeeccCeEeeCCCeEEEEEEEECCeEEEEEEEcHHH-----------HHHHHHHHHHHHhccC----------------
Confidence            44667789999999999766     899999987531           2456789999998743                


Q ss_pred             cccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCcccccc----------CCHHHHHHHHHHH
Q psy9184         336 KCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIKY----------RSPNQTYAMILQV  405 (562)
Q Consensus       336 ~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~~----------l~e~~i~~I~~QI  405 (562)
                               ||||+++++.+.+             ++.+|+|||||. |++.+.+..          .++..++.++.||
T Consensus        68 ---------HpnIv~~~~~~~~-------------~~~~~lv~E~~~-gsL~~~l~~~~~~~~~~~~~~~~~~~~i~~qi  124 (434)
T 2rio_A           68 ---------HPNVIRYYCSETT-------------DRFLYIALELCN-LNLQDLVESKNVSDENLKLQKEYNPISLLRQI  124 (434)
T ss_dssp             ---------STTBCCEEEEEEC-------------SSEEEEEECCCS-EEHHHHHHTC------------CCHHHHHHHH
T ss_pred             ---------CCCcCeEEEEEec-------------CCeEEEEEecCC-CCHHHHHhccCCCchhhhhccchhHHHHHHHH
Confidence                     3999999988875             568999999996 566555532          1333567899999


Q ss_pred             HHHHHHHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecCC---------cEEEee
Q psy9184         406 VFSLAVAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVGE---------KICYYD  476 (562)
Q Consensus       406 l~aL~yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~~---------g~v~~~  476 (562)
                      +.||.|||+ .||+||||||+|||++..+....       ..........+||+|||+|+.....         ...++.
T Consensus       125 ~~aL~~LH~-~~ivHrDLkp~NILl~~~~~~~~-------~~~~~~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~~gt~  196 (434)
T 2rio_A          125 ASGVAHLHS-LKIIHRDLKPQNILVSTSSRFTA-------DQQTGAENLRILISDFGLCKKLDSGQSSFRTNLNNPSGTS  196 (434)
T ss_dssp             HHHHHHHHH-TTEECCCCSGGGEEEECCHHHHS-------CCTTCCCSCEEEECCCTTCEECCC--------------CC
T ss_pred             HHHHHHHHH-CCccccCCChHhEEEecCccccc-------ccccCCCceEEEEcccccceecCCCCccceeeecCCCCCC
Confidence            999999999 79999999999999986531000       0000011237999999999976542         345788


Q ss_pred             cCCCccccCC--------CCCcHHHHHHHhhcccCCCCC-CCCCCChhhhHHHHHHHHhhcccCCCCCCCc-hhHHHHHH
Q psy9184         477 LSQDEELFEG--------EGDYQFDMYRMMRKQCQNNWQ-NFTPKNNVFWIHYLVDKATCLKKGYQYLRAP-RHQAFELL  546 (562)
Q Consensus       477 l~~~pelF~g--------~~~~q~dIy~lm~~~~~~~W~-~~~P~tn~~wl~yl~~~Ll~~~~~~~~~~~~-~~~~~~~l  546 (562)
                      .|++||++.+        ..+...|||++.-... ..+. +..|+....-..   ..++.....++..... .......+
T Consensus       197 ~y~aPE~~~~~~~~~~~~~~~~~~DiwSlG~il~-ellt~g~~Pf~~~~~~~---~~i~~~~~~~~~~~~~~~~~~~~~~  272 (434)
T 2rio_A          197 GWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFY-YILSKGKHPFGDKYSRE---SNIIRGIFSLDEMKCLHDRSLIAEA  272 (434)
T ss_dssp             TTSCHHHHSCCCTTSCCCCCCTHHHHHHHHHHHH-HHHTTSCCTTCSTTTHH---HHHHHTCCCCCCCTTCCCHHHHHHH
T ss_pred             CccCHHHhccccccccccCcchhhhhHhHHHHHH-HHHhCCCCCCCCchhhH---HHHhcCCCCcccccccccccchHHH
Confidence            8999999865        3455699988643332 2333 455553322111   1122211122221111 12234677


Q ss_pred             HHHHHhcCCCcCcCC
Q psy9184         547 EELGQNALHFDSCYE  561 (562)
Q Consensus       547 ~~l~~~~l~~~s~~~  561 (562)
                      .+|...+|.++...|
T Consensus       273 ~~li~~~L~~dP~~R  287 (434)
T 2rio_A          273 TDLISQMIDHDPLKR  287 (434)
T ss_dssp             HHHHHHHTCSSGGGS
T ss_pred             HHHHHHHhhCChhhC
Confidence            788888888877665

>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*

Probab=99.90  E-value=9.7e-24  Score=214.01  Aligned_cols=143  Identities=15%  Similarity=0.257  Sum_probs=116.0

Q ss_pred             CCCcee-eeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCcccc
Q psy9184         261 SALKNC-KKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTE  333 (562)
Q Consensus       261 ~~y~~~-~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~  333 (562)
                      ++|.+. +.||+|+||.||+|      +.||+|++...             ..+.+|+.++.++.+              
T Consensus        17 ~~y~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-------------~~~~~e~~~~~~~~~--------------   69 (299)
T 3m2w_A           17 DDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC-------------PKARREVELHWRASQ--------------   69 (299)
T ss_dssp             GTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECS-------------HHHHHHHHHHHHHTT--------------
T ss_pred             cchhhcCcccccCCCeEEEEEEEcCCCcEEEEEEeccc-------------HHHHHHHHHHHHhcc--------------
Confidence            557776 78999999999999      78999999743             346788988844433              


Q ss_pred             cccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc-----cCCHHHHHHHHHHHHHH
Q psy9184         334 LLKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK-----YRSPNQTYAMILQVVFS  408 (562)
Q Consensus       334 l~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~-----~l~e~~i~~I~~QIl~a  408 (562)
                                 ||||++++++|....         .....+|+||||+.||++.+.+.     .+++.+++.++.||+.|
T Consensus        70 -----------h~~i~~~~~~~~~~~---------~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~  129 (299)
T 3m2w_A           70 -----------CPHIVRIVDVYENLY---------AGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEA  129 (299)
T ss_dssp             -----------STTBCCEEEEEEEEE---------TTEEEEEEEECCCCSCBHHHHHHHCTTCCCBHHHHHHHHHHHHHH
T ss_pred             -----------CCCchhHHhhhhhhc---------CCCceEEEEEeecCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHH
Confidence                       499999998886411         11447899999999998877663     38999999999999999


Q ss_pred             HHHHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeec
Q psy9184         409 LAVAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFV  468 (562)
Q Consensus       409 L~yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~  468 (562)
                      |.|||+ .||+||||||+|||++..+..                 ..+||+|||+|+...
T Consensus       130 l~~lH~-~~i~H~dlkp~Nil~~~~~~~-----------------~~~kl~Dfg~a~~~~  171 (299)
T 3m2w_A          130 IQYLHS-INIAHRDVKPENLLYTSKRPN-----------------AILKLTDFGFAKETT  171 (299)
T ss_dssp             HHHHHH-TTEECCCCSGGGEEESSSSTT-----------------CCEEECCCTTCEECT
T ss_pred             HHHHHh-CCcccCCCCHHHEEEecCCCC-----------------CcEEEeccccccccc
Confidence            999999 799999999999999984210                 179999999997654

>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}

Probab=99.90  E-value=1.6e-24  Score=220.39  Aligned_cols=190  Identities=15%  Similarity=0.122  Sum_probs=139.0

Q ss_pred             CCCceeeeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhc----CCccccCCCCCCc
Q psy9184         261 SALKNCKKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKET----SDLQYRTENSTPC  330 (562)
Q Consensus       261 ~~y~~~~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L----~h~~~~~~n~~p~  330 (562)
                      ++|++.+.||+|+||.||+|      +.||||++........  ........+.+|+.+++.+    .|           
T Consensus        31 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~--~~~~~~~~~~~e~~~l~~l~~~~~h-----------   97 (312)
T 2iwi_A           31 AEYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGW--SPLSDSVTCPLEVALLWKVGAGGGH-----------   97 (312)
T ss_dssp             --CEEEEEEEEETTEEEEEEECTTTCCEEEEEECCSTTTC----------CCCCHHHHHHHHHHSSCCC-----------
T ss_pred             hceEEeeEEEcCCCEEEEEEEEccCCeEEEEEEEeccccccc--ccchhhHHHHHHHHHHHhhcccCCC-----------
Confidence            67999999999999999999      7899999976532110  0011223456799999998    56           


Q ss_pred             ccccccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEe-cCCCCCccccc---cCCHHHHHHHHHHHH
Q psy9184         331 FTELLKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILEL-KNGGNDSGDIK---YRSPNQTYAMILQVV  406 (562)
Q Consensus       331 fv~l~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~-~~gG~ll~~l~---~l~e~~i~~I~~QIl  406 (562)
                                     |||+++++++..             .+..++|||+ +.+|++.+.+.   .+++..++.++.||+
T Consensus        98 ---------------~~i~~~~~~~~~-------------~~~~~~v~e~~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~  149 (312)
T 2iwi_A           98 ---------------PGVIRLLDWFET-------------QEGFMLVLERPLPAQDLFDYITEKGPLGEGPSRCFFGQVV  149 (312)
T ss_dssp             ---------------SSBCCEEEEC------------------CEEEEECCSSEEEHHHHHHHHCSCCHHHHHHHHHHHH
T ss_pred             ---------------CCeeeEEEEEec-------------CCeEEEEEEecCCCCCHHHHHHhcCCCCHHHHHHHHHHHH
Confidence                           999999998875             4578999999 67777766554   389999999999999


Q ss_pred             HHHHHHHhhCCeEeccCCCCCEEEc-cCCCCCcccccCCcccccccCCceEEEEeccceeeecC---CcEEEeecCCCcc
Q psy9184         407 FSLAVAEVELEFEHRDLHMSNILVL-QTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVG---EKICYYDLSQDEE  482 (562)
Q Consensus       407 ~aL~yLH~~~~IiHRDLKpeNILl~-~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~---~g~v~~~l~~~pe  482 (562)
                      .||.|||+ .||+||||||+|||++ .++                    .++|+|||+++....   ....++..|++||
T Consensus       150 ~~l~~lH~-~~i~H~dlkp~Nil~~~~~~--------------------~~kl~dfg~~~~~~~~~~~~~~~~~~y~aPE  208 (312)
T 2iwi_A          150 AAIQHCHS-RGVVHRDIKDENILIDLRRG--------------------CAKLIDFGSGALLHDEPYTDFDGTRVYSPPE  208 (312)
T ss_dssp             HHHHHHHH-HTEECCCCSGGGEEEETTTT--------------------EEEECCCSSCEECCSSCBCCCCSCTTTSCHH
T ss_pred             HHHHHHHH-CCeeecCCChhhEEEeCCCC--------------------eEEEEEcchhhhcccCcccccCCcccccCce
Confidence            99999999 6999999999999998 444                    799999999987754   2234566789999


Q ss_pred             ccCCCCC--cHHHHHHHhhcccCCCCCCCCCCC
Q psy9184         483 LFEGEGD--YQFDMYRMMRKQCQNNWQNFTPKN  513 (562)
Q Consensus       483 lF~g~~~--~q~dIy~lm~~~~~~~W~~~~P~t  513 (562)
                      ++.+...  ...|||++.-... ..+.+..|+.
T Consensus       209 ~~~~~~~~~~~~Di~slG~il~-~l~~g~~pf~  240 (312)
T 2iwi_A          209 WISRHQYHALPATVWSLGILLY-DMVCGDIPFE  240 (312)
T ss_dssp             HHHHSCBCHHHHHHHHHHHHHH-HHHHSSCSCC
T ss_pred             eeecCCCCCccchHHHHHHHHH-HHHHCCCCCC
Confidence            8776433  3589988633332 3333444443

>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}

Probab=99.90  E-value=2.8e-24  Score=231.06  Aligned_cols=174  Identities=16%  Similarity=0.170  Sum_probs=132.6

Q ss_pred             CCCceeeeeeccCceEEEE-E----eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCcccccc
Q psy9184         261 SALKNCKKIGEGVYGEVFK-L----NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTELL  335 (562)
Q Consensus       261 ~~y~~~~~LG~GsfG~Vyk-a----~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~l~  335 (562)
                      .+|...+.||+|+||.|+. +    +.||||++.....           ..+.+|+.+++.+..                
T Consensus        24 ~~y~~~~~LG~G~~G~V~~~~~~~~~~vAvK~~~~~~~-----------~~~~~E~~~l~~l~~----------------   76 (432)
T 3p23_A           24 ISFCPKDVLGHGAEGTIVYRGMFDNRDVAVKRILPECF-----------SFADREVQLLRESDE----------------   76 (432)
T ss_dssp             EEEEEEEEEEECGGGCEEEEEESSSSEEEEEEECTTTE-----------EECHHHHHHHHHSCC----------------
T ss_pred             EEEecCCeeecCcCEEEEEEEEeCCeEEEEEEECHHHH-----------HHHHHHHHHHHhccC----------------
Confidence            4688999999999998554 4    8999999975421           124579999999943                


Q ss_pred             cccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCcccccc----CCHHHHHHHHHHHHHHHHH
Q psy9184         336 KCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIKY----RSPNQTYAMILQVVFSLAV  411 (562)
Q Consensus       336 ~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~~----l~e~~i~~I~~QIl~aL~y  411 (562)
                               ||||+++++++.+             ...+|+|||||. |++.+.+..    +++.++..++.||+.||.|
T Consensus        77 ---------HpnIv~l~~~~~~-------------~~~~~lv~E~~~-g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~  133 (432)
T 3p23_A           77 ---------HPNVIRYFCTEKD-------------RQFQYIAIELCA-ATLQEYVEQKDFAHLGLEPITLLQQTTSGLAH  133 (432)
T ss_dssp             ---------CTTBCCEEEEEEE-------------TTEEEEEEECCS-EEHHHHHHSSSCCCCSSCHHHHHHHHHHHHHH
T ss_pred             ---------CCCcCeEEEEEec-------------CCEEEEEEECCC-CCHHHHHHhcCCCccchhHHHHHHHHHHHHHH
Confidence                     3999999998875             558999999997 556655532    5566788999999999999


Q ss_pred             HHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecC--------CcEEEeecCCCccc
Q psy9184         412 AEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVG--------EKICYYDLSQDEEL  483 (562)
Q Consensus       412 LH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~--------~g~v~~~l~~~pel  483 (562)
                      ||+ .||+||||||+|||++..+..               ..+.+||+|||+|+....        .+..++..|++||+
T Consensus       134 LH~-~~ivHrDlKp~NIll~~~~~~---------------~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~gt~~y~APE~  197 (432)
T 3p23_A          134 LHS-LNIVHRDLKPHNILISMPNAH---------------GKIKAMISDFGLCKKLAVGRHSFSRRSGVPGTEGWIAPEM  197 (432)
T ss_dssp             HHH-TTCCCCCCSTTSEEECCCBTT---------------TBCCEEECCTTEEECC------------CCSCTTSCCGGG
T ss_pred             HHH-CcCEeCCCCHHHEEEecCCCC---------------CceeEEEecccceeeccCCCcceeeccccCCCcCccChhh
Confidence            999 799999999999999754310               113689999999987653        23446888999999


Q ss_pred             cCC----CCCcHHHHHHHhhc
Q psy9184         484 FEG----EGDYQFDMYRMMRK  500 (562)
Q Consensus       484 F~g----~~~~q~dIy~lm~~  500 (562)
                      +.+    ......|||++.-.
T Consensus       198 l~~~~~~~~t~~~DiwSlG~i  218 (432)
T 3p23_A          198 LSEDCKENPTYTVDIFSAGCV  218 (432)
T ss_dssp             TSCC---CCCTHHHHHHHHHH
T ss_pred             hhcccccCCCcHHHHHHHHHH
Confidence            874    33456999886433

>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...

Probab=99.90  E-value=1.6e-24  Score=222.35  Aligned_cols=194  Identities=15%  Similarity=0.111  Sum_probs=146.3

Q ss_pred             CCCCceeeeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCcccc
Q psy9184         260 SSALKNCKKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTE  333 (562)
Q Consensus       260 ~~~y~~~~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~  333 (562)
                      .++|++.+.||+|+||.||+|      +.||||++..........  ......+.+|+.+++.+.|              
T Consensus        42 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~--~~~~~~~~~E~~~l~~l~~--------------  105 (320)
T 3a99_A           42 ESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGE--LPNGTRVPMEVVLLKKVSS--------------  105 (320)
T ss_dssp             TTTEEEEEECSSSSSCEEEEEEETTTTEEEEEEEEEGGGCCCEEE--CTTCCEEEHHHHHHHHHCS--------------
T ss_pred             cCceEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEecccchhhhh--hhhhhHHHHHHHHHHhhcc--------------
Confidence            367999999999999999999      789999998753211000  0111345679999999975              


Q ss_pred             cccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCC-CCCccccc---cCCHHHHHHHHHHHHHHH
Q psy9184         334 LLKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNG-GNDSGDIK---YRSPNQTYAMILQVVFSL  409 (562)
Q Consensus       334 l~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~g-G~ll~~l~---~l~e~~i~~I~~QIl~aL  409 (562)
                                .||||+++++++..             ++..++|||++.+ |++.+.+.   .+++..++.++.||+.||
T Consensus       106 ----------~~~~i~~~~~~~~~-------------~~~~~lv~e~~~~~~~L~~~l~~~~~l~~~~~~~i~~qi~~~L  162 (320)
T 3a99_A          106 ----------GFSGVIRLLDWFER-------------PDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAV  162 (320)
T ss_dssp             ----------SSCSBCCEEEEEEC-------------SSEEEEEEECCSSEEEHHHHHHHHCSCCHHHHHHHHHHHHHHH
T ss_pred             ----------CCCCceEEEEEEec-------------CCcEEEEEEcCCCCccHHHHHhccCCCCHHHHHHHHHHHHHHH
Confidence                      04999999999875             5589999999986 55555443   489999999999999999


Q ss_pred             HHHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecCC---cEEEeecCCCccccCC
Q psy9184         410 AVAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVGE---KICYYDLSQDEELFEG  486 (562)
Q Consensus       410 ~yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~~---g~v~~~l~~~pelF~g  486 (562)
                      .|||+ .||+||||||+|||++.+..                   .+||+|||+++.....   ...++..|++||++.+
T Consensus       163 ~~LH~-~~ivH~Dlkp~NIll~~~~~-------------------~~kL~Dfg~~~~~~~~~~~~~~gt~~y~aPE~~~~  222 (320)
T 3a99_A          163 RHCHN-CGVLHRDIKDENILIDLNRG-------------------ELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRY  222 (320)
T ss_dssp             HHHHH-TTEECCCCSGGGEEEETTTT-------------------EEEECCCTTCEECCSSCBCCCCSCGGGSCHHHHHH
T ss_pred             HHHHH-CCcEeCCCCHHHEEEeCCCC-------------------CEEEeeCccccccccccccCCCCCccCCChHHhcc
Confidence            99999 79999999999999984321                   7999999999877542   2345778999998876


Q ss_pred             CC--CcHHHHHHHhhcccCCCCCCCCCCC
Q psy9184         487 EG--DYQFDMYRMMRKQCQNNWQNFTPKN  513 (562)
Q Consensus       487 ~~--~~q~dIy~lm~~~~~~~W~~~~P~t  513 (562)
                      ..  ....|||++.-... ..+.+..|+.
T Consensus       223 ~~~~~~~~Di~slG~il~-el~~g~~pf~  250 (320)
T 3a99_A          223 HRYHGRSAAVWSLGILLY-DMVCGDIPFE  250 (320)
T ss_dssp             SCBCHHHHHHHHHHHHHH-HHHHSSCSCC
T ss_pred             CCCCCccchHHhHHHHHH-HHHHCCCCCC
Confidence            43  34579988643332 2333444543

>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*

Probab=99.90  E-value=8.2e-24  Score=238.58  Aligned_cols=181  Identities=18%  Similarity=0.172  Sum_probs=144.1

Q ss_pred             CCCceeeeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCccccc
Q psy9184         261 SALKNCKKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTEL  334 (562)
Q Consensus       261 ~~y~~~~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~l  334 (562)
                      ++|++.++||+|+||.||+|      +.||||++....       .....+.+.+|+.+++.++|               
T Consensus        14 grY~i~~~LG~G~fG~Vyla~~~~tg~~VAVKvi~~~~-------~~~~~~~~~~Ei~iL~~L~H---------------   71 (676)
T 3qa8_A           14 GPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQEL-------SPKNRERWCLEIQIMKKLNH---------------   71 (676)
T ss_dssp             ---CCCCCCCBCSSSBCCCCCCTTTTCCEEECCCCSCC-------CHHHHHHHHHHHHHHHHCCB---------------
T ss_pred             CCeEEEEEEeeCCCeEEEEEEECCCCcEEEEEEecccC-------CHHHHHHHHHHHHHHHhCCC---------------
Confidence            67999999999999999999      789999987542       24445678999999999998               


Q ss_pred             ccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc------cCCHHHHHHHHHHHHHH
Q psy9184         335 LKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK------YRSPNQTYAMILQVVFS  408 (562)
Q Consensus       335 ~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~------~l~e~~i~~I~~QIl~a  408 (562)
                                 |||+++++++....       .....+..|+|||||.||++.+.+.      .+++..++.++.||+.|
T Consensus        72 -----------pnIV~l~~v~~~~~-------~~~~~~~~~LVmEy~~ggsL~~~L~~~~~~~~lse~~i~~I~~QLl~a  133 (676)
T 3qa8_A           72 -----------PNVVSAREVPDGLQ-------KLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSA  133 (676)
T ss_dssp             -----------TTBCCEEECCTTTC-------CCCTTSSCCCEEECCSSCBHHHHHHSSSCTTCCCSSHHHHHHHHHHHH
T ss_pred             -----------CCCCceeeeecccc-------cccCCCeEEEEEEeCCCCCHHHHHHhcccCCCCCHHHHHHHHHHHHHH
Confidence                       99999988875411       1122567899999999998766553      38899999999999999


Q ss_pred             HHHHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecCC----cEEEeecCCCcccc
Q psy9184         409 LAVAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVGE----KICYYDLSQDEELF  484 (562)
Q Consensus       409 L~yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~~----g~v~~~l~~~pelF  484 (562)
                      |.|||+ .||+||||||+|||++.++..                 ..+||+|||+++.....    ...++..|++||++
T Consensus       134 L~yLHs-~gIVHrDLKP~NILl~~~g~~-----------------~~vKL~DFG~a~~~~~~~~~~~~~gt~~Y~APE~l  195 (676)
T 3qa8_A          134 LRYLHE-NRIIHRDLKPENIVLQPGPQR-----------------LIHKIIDLGYAKELDQGELCTEFVGTLQYLAPELL  195 (676)
T ss_dssp             HHHHHH-TTBCCCCCCSTTEEEECCSSS-----------------CEEEECSCCCCCBTTSCCCCCCCCSCCTTCSSCSS
T ss_pred             HHHHHH-CCCccCCCCHHHeEeecCCCc-----------------eeEEEcccccccccccccccccccCCcccCChHHh
Confidence            999999 799999999999999977531                 26999999999876542    23457789999998


Q ss_pred             CC-CCCcHHHHHHHhh
Q psy9184         485 EG-EGDYQFDMYRMMR  499 (562)
Q Consensus       485 ~g-~~~~q~dIy~lm~  499 (562)
                      .+ ..+...|||++.-
T Consensus       196 ~~~~~s~ksDIwSLGv  211 (676)
T 3qa8_A          196 EQKKYTVTVDYWSFGT  211 (676)
T ss_dssp             CCSCCSTTHHHHHHHH
T ss_pred             ccCCCCchhHHHHHHH
Confidence            76 4566799988543

>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}

Probab=99.87  E-value=2.9e-23  Score=221.42  Aligned_cols=197  Identities=10%  Similarity=-0.024  Sum_probs=126.1

Q ss_pred             CCCceeeeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCcccc-CCCCCCcccc
Q psy9184         261 SALKNCKKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYR-TENSTPCFTE  333 (562)
Q Consensus       261 ~~y~~~~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~-~~n~~p~fv~  333 (562)
                      ..|...+.||+|+||.||+|      +.||||++....     .......+.+.+|+.+++.+.|.++. ......+++.
T Consensus        78 ~~~~~~~~LG~G~fG~Vy~a~~~~~g~~vAvK~~~~~~-----~~~~~~~~~~~~E~~~~~~l~~~~~~~~~~~~~~~~~  152 (413)
T 3dzo_A           78 RTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTE-----RPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIF  152 (413)
T ss_dssp             EEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEECCSC-----C----CCHHHHHHHHGGGGSTTCCSHHHHHHHTCBCC
T ss_pred             eeEEEecccccCCCEEEEEEEecCCCCceEEEEEecCC-----CccHHHHHHHHHHHHHHHhhccCCCHHHHHHhccccc
Confidence            45788899999999999999      789999988543     22233456788999999999873210 0000001111


Q ss_pred             cccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc----------cCCHHHHHHHHH
Q psy9184         334 LLKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK----------YRSPNQTYAMIL  403 (562)
Q Consensus       334 l~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~----------~l~e~~i~~I~~  403 (562)
                      ..+...+     ++...+...+...        ........+++|+++. |++.+.+.          .+++..+..++.
T Consensus       153 ~~~~~~~-----~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~-~~L~~ll~~l~~~~~~~~~l~~~~~~~i~~  218 (413)
T 3dzo_A          153 PFDLVKD-----PQKKKMIRVRLDE--------RDMWVLSRFFLYPRMQ-SNLQTFGEVLLSHSSTHKSLVHHARLQLTL  218 (413)
T ss_dssp             CCEEEEC-----CC-----------------------CCSEEEEEECCS-EEHHHHHHHHHHHTTTSHHHHHHHHHHHHH
T ss_pred             chhhccc-----CCCCccccccCCC--------ccccccceEEEeehhc-CCHHHHHHHhhcccccCCCCCHHHHHHHHH
Confidence            1111111     1112121211110        0011235788888774 55554442          266788999999


Q ss_pred             HHHHHHHHHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecC--CcEEEeecCCCc
Q psy9184         404 QVVFSLAVAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVG--EKICYYDLSQDE  481 (562)
Q Consensus       404 QIl~aL~yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~--~g~v~~~l~~~p  481 (562)
                      ||+.||.|||+ .||+||||||+|||++.++                    .+||+|||+|+....  ...++ ..|++|
T Consensus       219 qi~~aL~~LH~-~~iiHrDiKp~NILl~~~~--------------------~~kL~DFG~a~~~~~~~~~~~g-~~y~aP  276 (413)
T 3dzo_A          219 QVIRLLASLHH-YGLVHTYLRPVDIVLDQRG--------------------GVFLTGFEHLVRDGASAVSPIG-RGFAPP  276 (413)
T ss_dssp             HHHHHHHHHHH-TTEECSCCCGGGEEECTTC--------------------CEEECCGGGCEETTEEECCCCC-TTTCCH
T ss_pred             HHHHHHHHHHh-CCcccCCcccceEEEecCC--------------------eEEEEeccceeecCCccccCCC-CceeCc
Confidence            99999999999 7999999999999999987                    699999999987543  22233 789999


Q ss_pred             cccC----------C-CCCcHHHHHHHh
Q psy9184         482 ELFE----------G-EGDYQFDMYRMM  498 (562)
Q Consensus       482 elF~----------g-~~~~q~dIy~lm  498 (562)
                      |++.          + ..+...|||++.
T Consensus       277 E~~~~~~~~~~~~~~~~~~~~~DvwSlG  304 (413)
T 3dzo_A          277 ETTAERMLPFGQHHPTLMTFAFDTWTLG  304 (413)
T ss_dssp             HHHHHHTSTTGGGCCEEECHHHHHHHHH
T ss_pred             hhhhccccccccccCcCCCchhhHHHHH
Confidence            9883          2 234468998853

>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*

Probab=99.85  E-value=2.7e-22  Score=221.86  Aligned_cols=153  Identities=17%  Similarity=0.145  Sum_probs=113.3

Q ss_pred             eeeeeeccCceEEEEE----eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCccccccccccc
Q psy9184         265 NCKKIGEGVYGEVFKL----NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTELLKCSCV  340 (562)
Q Consensus       265 ~~~~LG~GsfG~Vyka----~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~l~~~~iv  340 (562)
                      ..+.||+|+||.||+|    ..+|+|+.................+.+.+|+.++++++|                     
T Consensus       340 ~~~~LG~G~fg~Vy~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~h---------------------  398 (540)
T 3en9_A          340 PEHLIGKGAEADIKRDSYLDFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALVKD---------------------  398 (540)
T ss_dssp             --------CCEEEEEEECSSCEEEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHGGG---------------------
T ss_pred             CCCEEeeCCCEEEEEEEECCCeEEEEEEecccccchhhhhHHHHHHHHHHHHHHHhcCC---------------------
Confidence            3578999999999988    889999876543211111223335678999999999998                     


Q ss_pred             CCCCCCCce--eehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccccCCHHHHHHHHHHHHHHHHHHHhhCCe
Q psy9184         341 RGRYPDRLV--TLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIKYRSPNQTYAMILQVVFSLAVAEVELEF  418 (562)
Q Consensus       341 ~g~~~pnIv--~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~~l~e~~i~~I~~QIl~aL~yLH~~~~I  418 (562)
                           |||+  .+++..               .+..|||||||+||++.+.+..     +..++.||+.||.|||+ .+|
T Consensus       399 -----~nIv~~~~~~~~---------------~~~~~lVmE~~~ggsL~~~l~~-----~~~i~~qi~~aL~~LH~-~gI  452 (540)
T 3en9_A          399 -----FGIPAPYIFDVD---------------LDNKRIMMSYINGKLAKDVIED-----NLDIAYKIGEIVGKLHK-NDV  452 (540)
T ss_dssp             -----GTCCCCCEEEEE---------------TTTTEEEEECCCSEEHHHHSTT-----CTHHHHHHHHHHHHHHH-TTE
T ss_pred             -----CCcCceEEEEEe---------------CCccEEEEECCCCCCHHHHHHH-----HHHHHHHHHHHHHHHHH-CcC
Confidence                 8999  555442               3356999999999977766654     67899999999999999 799


Q ss_pred             EeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecCC------------cEEEeecCCCccccCC
Q psy9184         419 EHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVGE------------KICYYDLSQDEELFEG  486 (562)
Q Consensus       419 iHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~~------------g~v~~~l~~~pelF~g  486 (562)
                      +||||||+|||++. .                     +||+|||+|+.....            ...++..|++||+|.+
T Consensus       453 iHrDiKp~NILl~~-~---------------------~kL~DFGla~~~~~~~~~~~~~~~~~~~~~GT~~y~APEv~~~  510 (540)
T 3en9_A          453 IHNDLTTSNFIFDK-D---------------------LYIIDFGLGKISNLDEDKAVDLIVFKKAVLSTHHEKFDEIWER  510 (540)
T ss_dssp             ECTTCCTTSEEESS-S---------------------EEECCCTTCEECCCHHHHHHHHHHHHHHHHHHCGGGHHHHHHH
T ss_pred             ccCCCCHHHEEECC-e---------------------EEEEECccCEECCCccccccchhhhhhhhcCCCCcCCHHHHHH
Confidence            99999999999987 3                     999999999987651            3345777788887765

>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*

Probab=99.84  E-value=5.9e-21  Score=193.97  Aligned_cols=138  Identities=18%  Similarity=0.160  Sum_probs=103.7

Q ss_pred             CCCceeeeeeccCceEEEEE-----eeEEEEEeecCCCCCCcc--hh--------HHHHHHHHHHHHHHHhcCCccccCC
Q psy9184         261 SALKNCKKIGEGVYGEVFKL-----NNSVIKIMPIEGDQSVNG--EE--------QKKFREIFSEIMVTKETSDLQYRTE  325 (562)
Q Consensus       261 ~~y~~~~~LG~GsfG~Vyka-----~~vAIKii~~~~~~~~~~--~~--------~~~~~~il~Ei~ilk~L~h~~~~~~  325 (562)
                      ..|.+.+.||+|+||.||+|     +.||||+++.........  ..        ......+.+|+.+++.++|      
T Consensus        90 ~~~~~~~~iG~G~~g~Vy~~~~~~g~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~~l~~l~~------  163 (282)
T 1zar_A           90 KVDAIGKLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQG------  163 (282)
T ss_dssp             SCSEEEEEEEECSSEEEEEEEETTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTTT------
T ss_pred             eEEEecCEeccCCCceEEEEEeCCCCEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHHHHHhccC------
Confidence            34667799999999999999     799999997543111000  00        0235678899999999875      


Q ss_pred             CCCCcccccccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccccCCHHHHHHHHHHH
Q psy9184         326 NSTPCFTELLKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIKYRSPNQTYAMILQV  405 (562)
Q Consensus       326 n~~p~fv~l~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~~l~e~~i~~I~~QI  405 (562)
                                          +++...+   .              .+..|+||||++||++.+ +.   ..+...++.||
T Consensus       164 --------------------~~v~~~~---~--------------~~~~~lvmE~~~g~~L~~-l~---~~~~~~i~~qi  202 (282)
T 1zar_A          164 --------------------LAVPKVY---A--------------WEGNAVLMELIDAKELYR-VR---VENPDEVLDMI  202 (282)
T ss_dssp             --------------------SSSCCEE---E--------------EETTEEEEECCCCEEGGG-CC---CSCHHHHHHHH
T ss_pred             --------------------CCcCeEE---e--------------ccceEEEEEecCCCcHHH-cc---hhhHHHHHHHH
Confidence                                3333332   1              235699999999987766 42   24466799999


Q ss_pred             HHHHHHHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeee
Q psy9184         406 VFSLAVAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCF  467 (562)
Q Consensus       406 l~aL~yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~  467 (562)
                      +.||.|||+ +||+||||||+|||++ ++                    .+||+|||+|+..
T Consensus       203 ~~~l~~lH~-~giiHrDlkp~NILl~-~~--------------------~vkl~DFG~a~~~  242 (282)
T 1zar_A          203 LEEVAKFYH-RGIVHGDLSQYNVLVS-EE--------------------GIWIIDFPQSVEV  242 (282)
T ss_dssp             HHHHHHHHH-TTEECSCCSTTSEEEE-TT--------------------EEEECCCTTCEET
T ss_pred             HHHHHHHHH-CCCEeCCCCHHHEEEE-CC--------------------cEEEEECCCCeEC
Confidence            999999999 7999999999999999 65                    8999999999854

>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*

Probab=99.78  E-value=3e-19  Score=178.65  Aligned_cols=141  Identities=17%  Similarity=0.098  Sum_probs=99.0

Q ss_pred             CceeeeeeccCceEEEEE------ee--EEEEEeecCCCCCCcc----------------hhHHHHHHHHHHHHHHHhcC
Q psy9184         263 LKNCKKIGEGVYGEVFKL------NN--SVIKIMPIEGDQSVNG----------------EEQKKFREIFSEIMVTKETS  318 (562)
Q Consensus       263 y~~~~~LG~GsfG~Vyka------~~--vAIKii~~~~~~~~~~----------------~~~~~~~~il~Ei~ilk~L~  318 (562)
                      |.+.+.||+|+||.||+|      +.  ||||+++.........                ........+.+|+.+++.+.
T Consensus        49 ~~i~~~ig~G~~g~Vy~a~~~~~g~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~  128 (258)
T 1zth_A           49 TAMGGVISTGKEANVFYADGVFDGKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVFIWTEKEFRNLERAK  128 (258)
T ss_dssp             EEEEEEEEECSSEEEEEEEEEETTEEEEEEEEEECCC-------GGGTTTCTTSCC----CHHHHHHHHHHHHHHHHHHH
T ss_pred             hhhCCEEeecceEEEEEEEEcCCCcEeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHHHHHHHHHHHHHHHHH
Confidence            578899999999999999      56  9999986542110000                01112246789999999998


Q ss_pred             CccccCCCCCCcccccccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCC-CCCccccc----cC
Q psy9184         319 DLQYRTENSTPCFTELLKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNG-GNDSGDIK----YR  393 (562)
Q Consensus       319 h~~~~~~n~~p~fv~l~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~g-G~ll~~l~----~l  393 (562)
                      |         +|            ..+|.++..                    +..+|||||+.+ |.+...+.    ..
T Consensus       129 ~---------~~------------i~~p~~~~~--------------------~~~~lVmE~~g~~g~~~~~L~~~~~~~  167 (258)
T 1zth_A          129 E---------AG------------VSVPQPYTY--------------------MKNVLLMEFIGEDELPAPTLVELGREL  167 (258)
T ss_dssp             H---------TT------------CCCCCEEEE--------------------ETTEEEEECCEETTEECCBHHHHGGGG
T ss_pred             h---------CC------------CCCCeEEEc--------------------CCCEEEEEecCCCCCccccHHHHhhcc
Confidence            7         11            001333321                    145899999942 42222222    23


Q ss_pred             CHHHHHHHHHHHHHHHHHHH-hhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeee
Q psy9184         394 SPNQTYAMILQVVFSLAVAE-VELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCF  467 (562)
Q Consensus       394 ~e~~i~~I~~QIl~aL~yLH-~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~  467 (562)
                      ++.++..++.||+.||.||| + +||+||||||+|||++. .                     ++|+|||+|...
T Consensus       168 ~~~~~~~i~~qi~~~l~~lH~~-~givHrDlkp~NILl~~-~---------------------~~liDFG~a~~~  219 (258)
T 1zth_A          168 KELDVEGIFNDVVENVKRLYQE-AELVHADLSEYNIMYID-K---------------------VYFIDMGQAVTL  219 (258)
T ss_dssp             GGSCHHHHHHHHHHHHHHHHHT-SCEECSSCSTTSEEESS-S---------------------EEECCCTTCEET
T ss_pred             ChHHHHHHHHHHHHHHHHHHHH-CCEEeCCCCHHHEEEcC-c---------------------EEEEECcccccC
Confidence            45688999999999999999 8 89999999999999987 3                     899999999764

>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A

Probab=99.66  E-value=4.8e-17  Score=172.52  Aligned_cols=151  Identities=15%  Similarity=0.157  Sum_probs=95.4

Q ss_pred             CCceeeeeeccCceEEEEE-----eeEEEEEeecCCCCCCc--c----hhHHHHHH--------HHHHHHHHHhcCCccc
Q psy9184         262 ALKNCKKIGEGVYGEVFKL-----NNSVIKIMPIEGDQSVN--G----EEQKKFRE--------IFSEIMVTKETSDLQY  322 (562)
Q Consensus       262 ~y~~~~~LG~GsfG~Vyka-----~~vAIKii~~~~~~~~~--~----~~~~~~~~--------il~Ei~ilk~L~h~~~  322 (562)
                      -|.+..+||.|+||.||+|     +.||||+++........  .    ........        ..+|...|.++.+   
T Consensus        96 iY~I~~~IG~Gk~a~VY~a~d~~G~~vAvKi~r~~~~sfr~v~~~r~~~~~~~~~~~~~~~rl~A~kE~~nL~rL~~---  172 (397)
T 4gyi_A           96 VYSVGSRIGVGKESDIMIVADEKGKQKVLKIHRLGRISFRTVKANRDYLRNRSTGSWMYLSRLAAIKEFAFMKALYE---  172 (397)
T ss_dssp             CSEEEEEEEECSSEEEEEEECTTCCEEEEEEECTTEECCCCCC--CEECTTSCHHHHHHHHHHHHHHHHHHHHHHHH---
T ss_pred             EEEecCEeeeCCceEEEEEECCCCCEEEEEEEecccccHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHHh---
Confidence            3889999999999999999     79999998753211000  0    00000111        2345555555433   


Q ss_pred             cCCCCCCcccccccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccccCCHHHHHHHH
Q psy9184         323 RTENSTPCFTELLKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIKYRSPNQTYAMI  402 (562)
Q Consensus       323 ~~~n~~p~fv~l~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~~l~e~~i~~I~  402 (562)
                                                     ....       .|..+.....+|||||++|+++.. +.  ...++..++
T Consensus       173 -------------------------------~gv~-------vp~p~~~~~~~LVME~i~G~~L~~-l~--~~~~~~~l~  211 (397)
T 4gyi_A          173 -------------------------------EGFP-------VPEPIAQSRHTIVMSLVDALPMRQ-VS--SVPDPASLY  211 (397)
T ss_dssp             -------------------------------TTCS-------CCCEEEEETTEEEEECCSCEEGGG-CC--CCSCHHHHH
T ss_pred             -------------------------------cCCC-------CCeeeeccCceEEEEecCCccHhh-hc--ccHHHHHHH
Confidence                                           2110       011111123479999998775533 32  234566789


Q ss_pred             HHHHHHHHHHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeee
Q psy9184         403 LQVVFSLAVAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCF  467 (562)
Q Consensus       403 ~QIl~aL~yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~  467 (562)
                      .||+.+|.+||+ +|||||||||.|||++.++.....          ......+.||||+-+...
T Consensus       212 ~qll~~l~~lH~-~gIVHrDLKp~NILl~~dgd~~d~----------~~~~~~~~iID~~Q~V~~  265 (397)
T 4gyi_A          212 ADLIALILRLAK-HGLIHGDFNEFNILIREEKDAEDP----------SSITLTPIIIXFPQMVSM  265 (397)
T ss_dssp             HHHHHHHHHHHH-TTEECSCCSTTSEEEEEEECSSCT----------TSEEEEEEECCCTTCEET
T ss_pred             HHHHHHHHHHHH-CCCcCCCCCHHHEEEeCCCCcccc----------cccccceEEEEeCCcccC
Confidence            999999999999 799999999999999987632100          001124899999987654

>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*

Probab=99.15  E-value=6.5e-11  Score=116.99  Aligned_cols=138  Identities=16%  Similarity=0.065  Sum_probs=100.8

Q ss_pred             CCCceeeeeeccCceEEEEE----eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCccccccc
Q psy9184         261 SALKNCKKIGEGVYGEVFKL----NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTELLK  336 (562)
Q Consensus       261 ~~y~~~~~LG~GsfG~Vyka----~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~l~~  336 (562)
                      ..|.+...+|.|+.+.||++    ..+++|+.+....        .....+.+|+.+++.+..                 
T Consensus        14 ~~~~~~~~~~g~s~~~v~~~~~~~~~~vlK~~~~~~~--------~~~~~~~~E~~~l~~l~~-----------------   68 (263)
T 3tm0_A           14 EKYRCVKDTEGMSPAKVYKLVGENENLYLKMTDSRYK--------GTTYDVEREKDMMLWLEG-----------------   68 (263)
T ss_dssp             TTSEEEECCSCCSSSEEEEEECSSCEEEEEEECGGGT--------TSTTCHHHHHHHHHHHTT-----------------
T ss_pred             ccceeEeeccCCCCCeEEEEECCCCcEEEEeCCcccC--------CCHHHHHHHHHHHHHHhc-----------------
Confidence            34788888999999999999    7999999875310        011247789999999965                 


Q ss_pred             ccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccccCCHHHHHHHHHHHHHHHHHHHhh-
Q psy9184         337 CSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIKYRSPNQTYAMILQVVFSLAVAEVE-  415 (562)
Q Consensus       337 ~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~~l~e~~i~~I~~QIl~aL~yLH~~-  415 (562)
                              +..+.++++++..             .+..|+|||+++|.++.+.+  .+......++.+++.+|..||+- 
T Consensus        69 --------~~~vP~v~~~~~~-------------~~~~~lv~e~i~G~~l~~~~--~~~~~~~~~~~~l~~~l~~LH~~~  125 (263)
T 3tm0_A           69 --------KLPVPKVLHFERH-------------DGWSNLLMSEADGVLCSEEY--EDEQSPEKIIELYAECIRLFHSID  125 (263)
T ss_dssp             --------TSCCCCEEEEEEE-------------TTEEEEEEECCSSEEHHHHC--CTTTCHHHHHHHHHHHHHHHHHSC
T ss_pred             --------CCCCCeEEEEEec-------------CCceEEEEEecCCeehhhcc--CCcccHHHHHHHHHHHHHHHhCCC
Confidence                    1344455554443             45789999999977654432  12334457889999999999980 


Q ss_pred             ---------------------------------------------------------CCeEeccCCCCCEEEccCCCCCc
Q psy9184         416 ---------------------------------------------------------LEFEHRDLHMSNILVLQTDQDES  438 (562)
Q Consensus       416 ---------------------------------------------------------~~IiHRDLKpeNILl~~~~~~~~  438 (562)
                                                                               ..++|+|++|.|||++...    
T Consensus       126 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~l~HgDl~~~Nil~~~~~----  201 (263)
T 3tm0_A          126 ISDCPYTNSLDSRLAELDYLLNNDLADVDCENWEEDTPFKDPRELYDFLKTEKPEEELVFSHGDLGDSNIFVKDGK----  201 (263)
T ss_dssp             CTTCSCBCCHHHHHHHHHHHHHTTCSCCSGGGGSTTCSSSSHHHHHHHHHHCCCCCCEEEECSSCCTTSEEEETTE----
T ss_pred             cccCCCcchHHHHHHHHHHHHhccccccccccccccccCCCHHHHHHHHHhcCCCCCceEECCCCCcCcEEEECCc----
Confidence                                                                     2489999999999997642    


Q ss_pred             ccccCCcccccccCCceEEEEeccceee
Q psy9184         439 SFTLDDTHYAMKTAGVQVTIIDFTISRC  466 (562)
Q Consensus       439 ~~~~~~~~~~~~~~g~~vKL~DFGLSr~  466 (562)
                                      .+.|+||+.+..
T Consensus       202 ----------------~~~lIDwe~a~~  213 (263)
T 3tm0_A          202 ----------------VSGFIDLGRSGR  213 (263)
T ss_dssp             ----------------EEEECCCTTCEE
T ss_pred             ----------------EEEEEEchhccc
Confidence                            467999998764

>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6

Probab=99.04  E-value=4.4e-10  Score=109.75  Aligned_cols=132  Identities=12%  Similarity=0.034  Sum_probs=90.3

Q ss_pred             CCceeeeeeccCceEEEEE-----eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCccccccc
Q psy9184         262 ALKNCKKIGEGVYGEVFKL-----NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTELLK  336 (562)
Q Consensus       262 ~y~~~~~LG~GsfG~Vyka-----~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~l~~  336 (562)
                      .+.+....+.|..+.||++     ..+++|+.....           ...+.+|+.+++.+.+.         +      
T Consensus        21 ~~~~~~~~~gg~~~~v~~~~~~~g~~~vlK~~~~~~-----------~~~~~~E~~~l~~l~~~---------~------   74 (264)
T 1nd4_A           21 GYDWAQQTIGCSDAAVFRLSAQGRPVLFVKTDLSGA-----------LNELQDEAARLSWLATT---------G------   74 (264)
T ss_dssp             TCEEEECSCTTSSCEEEEEECTTSCCEEEEEECSCT-----------TSCHHHHHHHHHHHHTT---------T------
T ss_pred             CCceEecccCCCCceEEEEecCCCCeEEEEeCCccc-----------chhhhHHHHHHHHHHhC---------C------
Confidence            3444333346667999999     469999876431           13467899999998761         0      


Q ss_pred             ccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccccCCHHHHHHHHHHHHHHHHHHHhhC
Q psy9184         337 CSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIKYRSPNQTYAMILQVVFSLAVAEVEL  416 (562)
Q Consensus       337 ~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~~l~e~~i~~I~~QIl~aL~yLH~~~  416 (562)
                               -.+.+++.....             ++..|+|||+++|.++ . +...+   ...++.+++..|..||+ .
T Consensus        75 ---------~~vP~~~~~~~~-------------~~~~~~v~e~i~G~~l-~-~~~~~---~~~~~~~l~~~l~~lh~-~  126 (264)
T 1nd4_A           75 ---------VPCAAVLDVVTE-------------AGRDWLLLGEVPGQDL-L-SSHLA---PAEKVSIMADAMRRLHT-L  126 (264)
T ss_dssp             ---------CCBCCEEEEEEC-------------SSCEEEEEECCSSEET-T-TSCCC---HHHHHHHHHHHHHHHTT-S
T ss_pred             ---------CCCCeEEEeccC-------------CCCCEEEEEecCCccc-C-cCcCC---HhHHHHHHHHHHHHHhC-C
Confidence                     113334443332             3468999999998766 4 32222   23677888888888887 4


Q ss_pred             C----------------------------------------------------------eEeccCCCCCEEEccCCCCCc
Q psy9184         417 E----------------------------------------------------------FEHRDLHMSNILVLQTDQDES  438 (562)
Q Consensus       417 ~----------------------------------------------------------IiHRDLKpeNILl~~~~~~~~  438 (562)
                      .                                                          ++|+|++|.|||++.++    
T Consensus       127 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~HgDl~~~Nil~~~~~----  202 (264)
T 1nd4_A          127 DPATCPFDHQAKHRIERARTRMEAGLVDQDDLDEEHQGLAPAELFARLKARMPDGEDLVVTHGDACLPNIMVENGR----  202 (264)
T ss_dssp             CGGGCCCBCCHHHHHHHHHHHHHTTCCCTTSCCGGGTTCCHHHHHHHHHHTCCSSCCEEEECSSCCGGGEEEETTE----
T ss_pred             CCCCCCCchHHHHHHHHHHHHHhcCCccchhhhhhccCccHHHHHHHHHHhcCCCCCeEEECCCCCCCcEEEECCc----
Confidence            3                                                          99999999999997653    


Q ss_pred             ccccCCcccccccCCceEEEEeccceeee
Q psy9184         439 SFTLDDTHYAMKTAGVQVTIIDFTISRCF  467 (562)
Q Consensus       439 ~~~~~~~~~~~~~~g~~vKL~DFGLSr~~  467 (562)
                                      .+.|+|||.|...
T Consensus       203 ----------------~~~liD~~~a~~g  215 (264)
T 1nd4_A          203 ----------------FSGFIDCGRLGVA  215 (264)
T ss_dssp             ----------------EEEECCCTTCEEE
T ss_pred             ----------------EEEEEcchhcccC
Confidence                            4669999998653

>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}

Probab=98.99  E-value=1.2e-09  Score=113.32  Aligned_cols=146  Identities=16%  Similarity=0.176  Sum_probs=102.8

Q ss_pred             ceeeeeeccCceEEEEE----eeEEEEEee--cCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCcccccccc
Q psy9184         264 KNCKKIGEGVYGEVFKL----NNSVIKIMP--IEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTELLKC  337 (562)
Q Consensus       264 ~~~~~LG~GsfG~Vyka----~~vAIKii~--~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~l~~~  337 (562)
                      ..++.|+.|.++.||++    ..+++|+.+  ...       .......+.+|+.+++.|...                 
T Consensus        41 ~~~~~l~~G~sn~~y~v~~~~~~~vlr~~~~p~~~-------~~~~~~~~~~E~~~l~~L~~~-----------------   96 (359)
T 3dxp_A           41 LSVEQFKGGQSNPTFKLVTPGQTYVMRAKPGPKSK-------LLPSAHAIEREYRVMDALAGT-----------------   96 (359)
T ss_dssp             CEEEECCC-CCSCEEEEECSSCEEEEECCCC-----------------CHHHHHHHHHHHTTS-----------------
T ss_pred             ceEEEcCCcccceEEEEEECCceEEEEeCCCCCCC-------CCCcHHHHHHHHHHHHHhhcC-----------------
Confidence            34688999999999999    788999876  321       112234678899999999861                 


Q ss_pred             cccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCcc-ccccCCHHHHHHHHHHHHHHHHHHHh--
Q psy9184         338 SCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSG-DIKYRSPNQTYAMILQVVFSLAVAEV--  414 (562)
Q Consensus       338 ~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~-~l~~l~e~~i~~I~~QIl~aL~yLH~--  414 (562)
                             +..+.+++..+.+..          ..+..|+|||+++|..+.+ .+..++..+...++.+++.+|+.||.  
T Consensus        97 -------~vpvP~~~~~~~~~~----------~~g~~~~vme~v~G~~l~~~~~~~l~~~~~~~~~~~l~~~La~LH~~~  159 (359)
T 3dxp_A           97 -------DVPVAKMYALCEDES----------VIGRAFYIMEFVSGRVLWDQSLPGMSPAERTAIYDEMNRVIAAMHTVD  159 (359)
T ss_dssp             -------SSCCCCEEEEECCTT----------TTSSCEEEEECCCCBCCCCTTCTTCCHHHHHHHHHHHHHHHHHHHHSC
T ss_pred             -------CCCCCcEEEECCCCC----------ccCCeEEEEEecCCeecCCCccccCCHHHHHHHHHHHHHHHHHHhCCC
Confidence                   123444444443210          1245799999999776644 33457888899999999999999997  


Q ss_pred             -------------------------------------------------------hCCeEeccCCCCCEEEccCCCCCcc
Q psy9184         415 -------------------------------------------------------ELEFEHRDLHMSNILVLQTDQDESS  439 (562)
Q Consensus       415 -------------------------------------------------------~~~IiHRDLKpeNILl~~~~~~~~~  439 (562)
                                                                             ...++|+|++|.|||++.++..   
T Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~lvHgD~~~~Nil~~~~~~~---  236 (359)
T 3dxp_A          160 YQAIGLGDYGKPGNYFQRQIERWTKQYKLSETESIPAMDSLMDWLPQHIPQEDADLTSIVHGDYRLDNLMFHPTEPR---  236 (359)
T ss_dssp             TTTTTCTTSSCCSCHHHHHHHHHHHHHHHHCCSCCHHHHHHHHHGGGCCCSTTSSCCEEECSSCSGGGEEECSSSSC---
T ss_pred             chhccccccCCCCCchHHHHHHHHHHHHhcCCcCChHHHHHHHHHHhcCCCccCCCceEEeCCCCCCcEEEeCCCCc---
Confidence                                                                   1359999999999999876520   


Q ss_pred             cccCCcccccccCCceEEEEeccceeeec
Q psy9184         440 FTLDDTHYAMKTAGVQVTIIDFTISRCFV  468 (562)
Q Consensus       440 ~~~~~~~~~~~~~g~~vKL~DFGLSr~~~  468 (562)
                                     .+.|+||+.|....
T Consensus       237 ---------------v~~viDwe~a~~g~  250 (359)
T 3dxp_A          237 ---------------VLAVLDWELSTLGH  250 (359)
T ss_dssp             ---------------EEEECCCTTCEEEC
T ss_pred             ---------------EEEEECccccccCC
Confidence                           46899999998654

>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A

Probab=98.42  E-value=1.5e-06  Score=87.86  Aligned_cols=142  Identities=13%  Similarity=0.063  Sum_probs=98.6

Q ss_pred             eeeeeeccCceEEEEE-eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCcccccccccccCCC
Q psy9184         265 NCKKIGEGVYGEVFKL-NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTELLKCSCVRGR  343 (562)
Q Consensus       265 ~~~~LG~GsfG~Vyka-~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~l~~~~iv~g~  343 (562)
                      .++.++.|....||++ ..+++|+-..          ......+.+|+.+++.+.+..              .+.     
T Consensus        24 ~i~~~~~G~~n~v~~v~~~~vlR~~~~----------~~~~~~~~~E~~~l~~l~~~~--------------~v~-----   74 (304)
T 3sg8_A           24 TIEISGEGNDCIAYEINRDFIFKFPKH----------SRGSTNLFNEVNILKRIHNKL--------------PLP-----   74 (304)
T ss_dssp             CCCEEEECSSEEEEESTTSEEEEEESS----------HHHHHHHHHHHHHHHHHTTSS--------------SSC-----
T ss_pred             eeEecCCCCcceEEEECCEEEEEecCC----------cchHHHHHHHHHHHHHHHhcC--------------CCC-----
Confidence            3567999999999999 8899998542          133457889999999885400              000     


Q ss_pred             CCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCcc-ccccCCHHHHHHHHHHHHHHHHHHHhh-------
Q psy9184         344 YPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSG-DIKYRSPNQTYAMILQVVFSLAVAEVE-------  415 (562)
Q Consensus       344 ~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~-~l~~l~e~~i~~I~~QIl~aL~yLH~~-------  415 (562)
                       .|.++..   ....        .  .-...|+||++++|..+.. .+..++..+...++.|++..|..||+-       
T Consensus        75 -vP~~~~~---~~~~--------~--~~~~~~~vm~~i~G~~l~~~~~~~l~~~~~~~~~~~l~~~la~LH~~~~~~~~~  140 (304)
T 3sg8_A           75 -IPEVVFT---GMPS--------E--TYQMSFAGFTKIKGVPLTPLLLNNLPKQSQNQAAKDLARFLSELHSINISGFKS  140 (304)
T ss_dssp             -CCCEEEE---CCCC--------S--SCSCSCEEEECCCCEECCHHHHHTSCHHHHHHHHHHHHHHHHHHHHSCCTTSCG
T ss_pred             -CCceEee---cCCC--------C--CCCcceEEEcccCCeECCccccccCCHHHHHHHHHHHHHHHHHHHcCCCCCCCc
Confidence             1333221   1110        0  0124589999999776653 334578888889999999999999960       


Q ss_pred             --------------------------------------------------CCeEeccCCCCCEEEccC-CCCCcccccCC
Q psy9184         416 --------------------------------------------------LEFEHRDLHMSNILVLQT-DQDESSFTLDD  444 (562)
Q Consensus       416 --------------------------------------------------~~IiHRDLKpeNILl~~~-~~~~~~~~~~~  444 (562)
                                                                        ..++|+|++|.|||++.+ +.         
T Consensus       141 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~---------  211 (304)
T 3sg8_A          141 NLVLDFREKINEDNKKIKKLLSRELKGPQMKKVDDFYRDILENEIYFKYYPCLIHNDFSSDHILFDTEKNT---------  211 (304)
T ss_dssp             GGBCCHHHHHHHHHHHHHHHHTTTSCHHHHHHHHHHHHHHHTCGGGTCCCCEEECSCCCGGGEEEETTTTE---------
T ss_pred             cchhhHHHHHHHHHHHHHHHhcccCCcccHHHHHHHHHHHHhccccccCCceeEeCCCCcccEEEeCCCCC---------
Confidence                                                              137999999999999984 21         


Q ss_pred             cccccccCCceEEEEeccceeeec
Q psy9184         445 THYAMKTAGVQVTIIDFTISRCFV  468 (562)
Q Consensus       445 ~~~~~~~~g~~vKL~DFGLSr~~~  468 (562)
                                .+.|+||+.+....
T Consensus       212 ----------~~~~iD~~~~~~~~  225 (304)
T 3sg8_A          212 ----------ICGIIDFGDAAISD  225 (304)
T ss_dssp             ----------EEEECCCTTCEEEC
T ss_pred             ----------EEEEEeCCCCccCC
Confidence                      57899999987643

>3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A*

Probab=98.41  E-value=3.6e-06  Score=85.65  Aligned_cols=106  Identities=12%  Similarity=0.105  Sum_probs=68.5

Q ss_pred             ceeeeeeccCceEEEEE-eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCcccccccccccCC
Q psy9184         264 KNCKKIGEGVYGEVFKL-NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTELLKCSCVRG  342 (562)
Q Consensus       264 ~~~~~LG~GsfG~Vyka-~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~l~~~~iv~g  342 (562)
                      ..++.++.|....||+. ..+++|+-..          ......+.+|+.+|+.|.+.-       +       +.+   
T Consensus        22 ~~v~~l~~G~~n~v~~vg~~~VlR~~~~----------~~~~~~~~~E~~~L~~L~~~~-------~-------v~V---   74 (306)
T 3tdw_A           22 QSVESLGEGFRNYAILVNGDWVFRFPKS----------QQGADELNKEIQLLPLLVGCV-------K-------VNI---   74 (306)
T ss_dssp             SCEEEEEECSSEEEEEETTTEEEEEESS----------HHHHHHHHHHHHHHHHHTTTC-------S-------SBC---
T ss_pred             eeeeecCCCcceeEEEECCEEEEEecCC----------chHHHHHHHHHHHHHHHHhcC-------C-------CCC---
Confidence            44677899999999999 8899998431          223457889999999998610       0       001   


Q ss_pred             CCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCcc-ccccCCHHHHHHHHHHHHHHHHHHHh
Q psy9184         343 RYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSG-DIKYRSPNQTYAMILQVVFSLAVAEV  414 (562)
Q Consensus       343 ~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~-~l~~l~e~~i~~I~~QIl~aL~yLH~  414 (562)
                         |.++....   .            ..+..|++||+++|..+.. .+..++..+...+..|+...|+.||+
T Consensus        75 ---P~~~~~~~---~------------~~g~~~~v~e~i~G~~l~~~~~~~l~~~~~~~~~~~lg~~La~LH~  129 (306)
T 3tdw_A           75 ---PQYVYIGK---R------------SDGNPFVGYRKVQGQILGEDGMAVLPDDAKDRLALQLAEFMNELSA  129 (306)
T ss_dssp             ---CCEEEEEE---C------------TTSCEEEEEECCCSEECHHHHHTTSCHHHHHHHHHHHHHHHHHHHH
T ss_pred             ---CCeEeecc---c------------CCCceEEEEeccCCeECchhhhhhCCHHHHHHHHHHHHHHHHHHhc
Confidence               33332221   1            1346789999999765543 22335666666677777777776665

>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*

Probab=98.09  E-value=1.8e-05  Score=77.93  Aligned_cols=131  Identities=11%  Similarity=0.128  Sum_probs=83.2

Q ss_pred             eeeeccCce-EEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCcccccccccc
Q psy9184         267 KKIGEGVYG-EVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTELLKCSC  339 (562)
Q Consensus       267 ~~LG~GsfG-~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~l~~~~i  339 (562)
                      ..+..|..| .||+.      ..+++|+-+..           ....+.+|..+|+.|...       +|          
T Consensus        30 ~~~~~G~S~~~v~rl~~~~~~~~~~lk~~~~~-----------~~~~~~~E~~~l~~l~~~-------vP----------   81 (272)
T 4gkh_A           30 ARDNVGQSGATIYRLYGKPNAPELFLKHGKGS-----------VANDVTDEMVRLNWLTAF-------MP----------   81 (272)
T ss_dssp             EEEECSSSSCEEEEEECCTTCCCEEEEEEETH-----------HHHHHHHHHHHHHHHTTT-------SC----------
T ss_pred             EEccCCCcCCeEEEEEecCCCeEEEEEECCCC-----------CHhHHHHHHHHHHHhccC-------CC----------
Confidence            345556555 68876      57899987632           235678899999988650       11          


Q ss_pred             cCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccccCCHHHHHHHHHHHHHHHHHHHhh----
Q psy9184         340 VRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIKYRSPNQTYAMILQVVFSLAVAEVE----  415 (562)
Q Consensus       340 v~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~~l~e~~i~~I~~QIl~aL~yLH~~----  415 (562)
                           -|.++   .+..+             ++..|+|||+++|.++.+... ........+..++...|.-||.-    
T Consensus        82 -----VP~v~---~~~~~-------------~~~~~lvme~l~G~~~~~~~~-~~~~~~~~~~~~l~~~L~~Lh~~~~~~  139 (272)
T 4gkh_A           82 -----LPTIK---HFIRT-------------PDDAWLLTTAIPGKTAFQVLE-EYPDSGENIVDALAVFLRRLHSIPVCN  139 (272)
T ss_dssp             -----CCCEE---EEEEE-------------TTEEEEEEECCCSEEHHHHHH-HCGGGHHHHHHHHHHHHHHHHTSCGGG
T ss_pred             -----cCeEE---EEEEE-------------CCeEEEEEEeeCCcccccccc-CCHHHHHHHHHHHHHHHHHhcCCCccc
Confidence                 14443   33332             457899999999754333222 12233344556666666666630    


Q ss_pred             -----------------------------------------------------CCeEeccCCCCCEEEccCCCCCccccc
Q psy9184         416 -----------------------------------------------------LEFEHRDLHMSNILVLQTDQDESSFTL  442 (562)
Q Consensus       416 -----------------------------------------------------~~IiHRDLKpeNILl~~~~~~~~~~~~  442 (562)
                                                                           ..++|+|++|.|||++..+        
T Consensus       140 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~HGDl~~~Nil~~~~~--------  211 (272)
T 4gkh_A          140 CPFNSDRVFRLAQAQSRMNNGLVDASDFDDERNGWPVEQVWKEMHKLLPFSPDSVVTHGDFSLDNLIFDEGK--------  211 (272)
T ss_dssp             CCBBCCHHHHHHHHHHHHHTTCCCGGGCCGGGTTCCHHHHHHHHHTTCCCCCCEEEECSCCCTTSEEEETTE--------
T ss_pred             CCcCcccccchhhHHHHHHHhhhhhhhccccccchHHHHHHHHHHhcccccCCcEEEcCCCCCCeEEEECCe--------
Confidence                                                                 0178999999999998653        


Q ss_pred             CCcccccccCCceEEEEeccceeee
Q psy9184         443 DDTHYAMKTAGVQVTIIDFTISRCF  467 (562)
Q Consensus       443 ~~~~~~~~~~g~~vKL~DFGLSr~~  467 (562)
                                  .+-|+||+.+...
T Consensus       212 ------------~~~viDwe~a~~g  224 (272)
T 4gkh_A          212 ------------LIGCIDVGRVGIA  224 (272)
T ss_dssp             ------------EEEECCCTTCEEE
T ss_pred             ------------EEEEEECcccccC
Confidence                        4669999998753

>2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis}

Probab=97.78  E-value=5.1e-05  Score=76.78  Aligned_cols=32  Identities=22%  Similarity=0.280  Sum_probs=27.2

Q ss_pred             CCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeee
Q psy9184         416 LEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCF  467 (562)
Q Consensus       416 ~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~  467 (562)
                      ..++|+|++|.|||++.++                    .+.|+||+.+...
T Consensus       222 ~~l~HgD~~~~Nil~~~~~--------------------~~~lIDfe~a~~g  253 (346)
T 2q83_A          222 PNLCHQDYGTGNTLLGENE--------------------QIWVIDLDTVSFD  253 (346)
T ss_dssp             CCEECSSCSTTSEEECGGG--------------------CEEECCCTTCEEC
T ss_pred             CceecCCCCcccEEEeCCC--------------------cEEEEehhhcccC
Confidence            5799999999999997654                    6999999988653

>3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A*

Probab=97.68  E-value=7.1e-05  Score=76.95  Aligned_cols=33  Identities=15%  Similarity=0.172  Sum_probs=26.8

Q ss_pred             CCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeec
Q psy9184         416 LEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFV  468 (562)
Q Consensus       416 ~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~  468 (562)
                      ..++|+|++|.|||++...                    .+.|+||+.+....
T Consensus       222 ~~l~HgDl~~~Nil~~~~~--------------------~~~vIDwe~a~~g~  254 (357)
T 3ats_A          222 PVLLWGDARVGNVLYRDFQ--------------------PVAVLDWEMVALGP  254 (357)
T ss_dssp             CEEECSSCSGGGEEEETTE--------------------EEEECCGGGCEEEC
T ss_pred             ceEEeCCCCCCeEEEeCCc--------------------EEEEEcccccccCC
Confidence            4689999999999998432                    47899999987643

>2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A*

Probab=97.64  E-value=2.8e-05  Score=81.51  Aligned_cols=54  Identities=19%  Similarity=0.218  Sum_probs=34.2

Q ss_pred             eeeeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCC
Q psy9184         265 NCKKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSD  319 (562)
Q Consensus       265 ~~~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h  319 (562)
                      ..+.||.|.++.||++      ..++||....... ............+..|..+++.+..
T Consensus        34 ~~~~lg~G~~n~vyrv~~~~~~~~~vvK~~~~~~r-~~~~~~~~~~~r~~~E~~~L~~l~~   93 (397)
T 2olc_A           34 TCQEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAK-VVGESWPLTIDRARIESSALIRQGE   93 (397)
T ss_dssp             EEEECCSSSSEEEEEEEC----CEEEEEEECCC--------CCCCTTHHHHHHHHHHHHHT
T ss_pred             EEEECCCCceEEEEEEEECCCCcEEEEEecchhhc-ccCCCCcCcHHHHHHHHHHHHHhhh
Confidence            4678999999999999      4799998763210 0000000112356779999988865

>3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 2.55A {Mesorhizobium loti}

Probab=97.10  E-value=0.0012  Score=66.37  Aligned_cols=45  Identities=13%  Similarity=0.129  Sum_probs=31.5

Q ss_pred             eeeeeccCceEEEEEeeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCC
Q psy9184         266 CKKIGEGVYGEVFKLNNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSD  319 (562)
Q Consensus       266 ~~~LG~GsfG~Vyka~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h  319 (562)
                      ++.|+.|....+|++..+++|+-.......         -...+|+.+++.+..
T Consensus        23 i~~l~gG~tN~~~~~~~~vlR~~~~~~~~~---------~~r~~E~~~l~~l~~   67 (301)
T 3dxq_A           23 PLERLGGLTNLVFRAGDLCLRIPGKGTEEY---------INRANEAVAAREAAK   67 (301)
T ss_dssp             CEEEESCSSEEEEEETTEEEEEECC----C---------CCHHHHHHHHHHHHH
T ss_pred             eeEcCCccccccceeeeEEEECCCCCccce---------eCHHHHHHHHHHHHH
Confidence            688999999999999888999876432110         112468888887765

>2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6

Probab=97.04  E-value=0.0024  Score=64.28  Aligned_cols=46  Identities=15%  Similarity=0.166  Sum_probs=29.9

Q ss_pred             ceeeeeeccCceEEEEE----eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCC
Q psy9184         264 KNCKKIGEGVYGEVFKL----NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSD  319 (562)
Q Consensus       264 ~~~~~LG~GsfG~Vyka----~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h  319 (562)
                      ..++.|+.|....||++    ..+++|+.....          ....+..|+.+++.|..
T Consensus        25 ~~~~~i~~G~~n~~~~v~~~~g~~vlk~~~~~~----------~~~~l~~e~~~l~~L~~   74 (322)
T 2ppq_A           25 TSYKGIAEGVENSNFLLHTTKDPLILTLYEKRV----------EKNDLPFFLGLMQHLAA   74 (322)
T ss_dssp             EEEEEECC---EEEEEEEESSCCEEEEEECC-------------CCHHHHHHHHHHHHHH
T ss_pred             eEeeccCCCcccceEEEEeCCccEEEEEeCCCC----------CHHHHHHHHHHHHHHHH
Confidence            44678888999999998    578999887521          01245678888887765

>3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT}

Probab=96.69  E-value=0.011  Score=60.40  Aligned_cols=46  Identities=15%  Similarity=0.110  Sum_probs=35.8

Q ss_pred             CceeeeeeccCceEEEEE----eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCC
Q psy9184         263 LKNCKKIGEGVYGEVFKL----NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSD  319 (562)
Q Consensus       263 y~~~~~LG~GsfG~Vyka----~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h  319 (562)
                      ....+.|+.|....+|+.    ..+++|+-...           ....+..|...|+.|..
T Consensus        38 i~~~~~l~gG~~n~~y~v~~~~~~~vlK~~~~~-----------~~~~~~~E~~~L~~L~~   87 (312)
T 3jr1_A           38 IKHKEKLYSGEMNEIWLINDEVQTVFVKINERS-----------YRSMFRAEADQLALLAK   87 (312)
T ss_dssp             CCEEEEECCSSSSEEEEEESSSCEEEEEEEEGG-----------GHHHHHHHHHHHHHHHH
T ss_pred             eeeeEEeCCccceeeeEEEECCCeEEEEeCCcc-----------cHHHHHHHHHHHHHHHh
Confidence            345688999999999999    78899987632           13567889999988864

>2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana}

Probab=96.68  E-value=0.0017  Score=68.55  Aligned_cols=32  Identities=28%  Similarity=0.308  Sum_probs=27.6

Q ss_pred             CCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeec
Q psy9184         416 LEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFV  468 (562)
Q Consensus       416 ~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~  468 (562)
                      ..++|+|++|.|||++.+                     .+.|+||+.+....
T Consensus       232 ~~liHGDl~~~Nil~~~~---------------------~~~lID~e~a~~G~  263 (420)
T 2pyw_A          232 QALIHGDLHTGSVMVTQD---------------------STQVIDPEFSFYGP  263 (420)
T ss_dssp             CEEECSCCSGGGEEECSS---------------------CEEECCCTTCEEEC
T ss_pred             CeEEecCCCCCcEEEeCC---------------------CCEEEeCcccccCc
Confidence            469999999999999876                     48999999988654

>3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX}

Probab=96.45  E-value=0.0084  Score=59.62  Aligned_cols=50  Identities=8%  Similarity=0.050  Sum_probs=37.3

Q ss_pred             CCceeeeeeccCceEEEEE-----eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCC
Q psy9184         262 ALKNCKKIGEGVYGEVFKL-----NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSD  319 (562)
Q Consensus       262 ~y~~~~~LG~GsfG~Vyka-----~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h  319 (562)
                      ...-+..+|.|..+.||+.     +.|++|+-+....        .....+..|+..|+.|..
T Consensus        16 ~v~~v~~~g~G~~~~vyrv~l~DG~~~~vK~~~~~~~--------~~~~~~~~Ea~~L~~L~~   70 (288)
T 3f7w_A           16 EVAAVAERGHSHRWHLYRVELADGTPLFVKALPDDAP--------ALDGLFRAEALGLDWLGR   70 (288)
T ss_dssp             CEEEEEEEEEETTEEEEEEEETTSCEEEEEECCTTCC--------CCTTHHHHHHHHHHHHTC
T ss_pred             CeEEEEecCCCCCeEEEEEEECCCCEEEEEEeCCCCc--------chhhHHHHHHHHHHHHHh
Confidence            3456789999999999999     7899998764321        111356789999998865

>1zyl_A Hypothetical protein YIHE; putative protein kinase, structural genomics, PSI, protein structure initiative; 2.80A {Escherichia coli} SCOP: d.144.1.6

Probab=95.57  E-value=0.061  Score=53.99  Aligned_cols=44  Identities=14%  Similarity=0.157  Sum_probs=30.7

Q ss_pred             eeeeeccCceEEEEE-----eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCC
Q psy9184         266 CKKIGEGVYGEVFKL-----NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSD  319 (562)
Q Consensus       266 ~~~LG~GsfG~Vyka-----~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h  319 (562)
                      +..|+ |....||++     +.+++|+.....         .....+..|..+++.|..
T Consensus        31 ~~~l~-g~~n~~y~v~~~~g~~~vlK~~~~~~---------~~~~~~~~E~~~~~~L~~   79 (328)
T 1zyl_A           31 LTPLN-SYENRVYQFQDEDRRRFVVKFYRPER---------WTADQILEEHQFALQLVN   79 (328)
T ss_dssp             CEEEC-CSSSEEEEECCTTCCCEEEEEECTTT---------SCHHHHHHHHHHHHHHHH
T ss_pred             EEeec-CcccceEEEEcCCCCEEEEEEcCCCC---------CCHHHHHHHHHHHHHHHH
Confidence            35667 888899998     379999987331         012456678888888864

>3feg_A Choline/ethanolamine kinase; non-protein kinase, choline kinase, structural genomics CONS SGC, hemicholinium-3, phosphorylation; HET: HC7 ADP AMP; 1.30A {Homo sapiens} PDB: 3lq3_A* 2ig7_A*

Probab=94.71  E-value=0.071  Score=55.88  Aligned_cols=70  Identities=7%  Similarity=0.175  Sum_probs=35.9

Q ss_pred             HHHHHhhhccCccccccccCCCCCCceeeeeeccCceEEEEE-------------eeEEEEEeecCCCCCCcchhHHHHH
Q psy9184         239 RKKILDICQQEDVVSFEDRYPSSALKNCKKIGEGVYGEVFKL-------------NNSVIKIMPIEGDQSVNGEEQKKFR  305 (562)
Q Consensus       239 ~~~ll~~~~q~~~~~f~~~~~~~~y~~~~~LG~GsfG~Vyka-------------~~vAIKii~~~~~~~~~~~~~~~~~  305 (562)
                      +.+.++.|...-...|... +.+.+. ++.|..|-...+|++             ..+++|+....         .....
T Consensus        30 ~~~~~~~~~~~l~~~W~~~-~~~~l~-v~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlR~~g~~---------~~~~~   98 (379)
T 3feg_A           30 ERRAYQWCREYLGGAWRRV-QPEELR-VYPVSGGLSNLLFRCSLPDHLPSVGEEPREVLLRLYGAI---------LQGVD   98 (379)
T ss_dssp             HHHHHHHHHHHHCGGGGGC-CGGGCC-CEEC-----CCEEEEECCTTSCCCSSCCSEEEEEECC------------CCHH
T ss_pred             HHHHHHHHHHHccCcCCCC-CcCceE-EEEcCCcccccEEEEEeCCCccccCCCCCeEEEEECCCc---------cchHH
Confidence            3556666655333333321 112233 467777888888887             25788774211         11234


Q ss_pred             HHHHHHHHHHhcCC
Q psy9184         306 EIFSEIMVTKETSD  319 (562)
Q Consensus       306 ~il~Ei~ilk~L~h  319 (562)
                      .+.+|..+++.|..
T Consensus        99 ~~~rE~~vl~~L~~  112 (379)
T 3feg_A           99 SLVLESVMFAILAE  112 (379)
T ss_dssp             HHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHh
Confidence            56689999988875

>3csv_A Aminoglycoside phosphotransferase; YP_614837.1, phosphotransferase enzyme family, structural genomics, JOIN for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP}

Probab=88.73  E-value=0.16  Score=51.26  Aligned_cols=38  Identities=32%  Similarity=0.446  Sum_probs=28.4

Q ss_pred             CCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecC
Q psy9184         416 LEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVG  469 (562)
Q Consensus       416 ~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~  469 (562)
                      ..++|+|+++.|||++.+...                +-.+.|+||+.+.....
T Consensus       183 ~~lvHgD~~~~Nil~~~~~~~----------------~~~~~lIDf~~a~~G~~  220 (333)
T 3csv_A          183 MVFVHRDFHAQNLLWLPEREG----------------LARVGVIDFQDAKLGHR  220 (333)
T ss_dssp             CEEECSCCSGGGEEECTTSCG----------------GGGEEECCCTTCEEECT
T ss_pred             CeeEeCCcCcccEEeccCcCC----------------CCCeEEEeCCCcCcCCC
Confidence            369999999999999864100                01589999999887544

>2qg7_A Ethanolamine kinase PV091845; malaria, SGC, structural genomics consortium, transferase; 2.41A {Plasmodium vivax}

Probab=85.97  E-value=0.43  Score=51.10  Aligned_cols=46  Identities=13%  Similarity=0.164  Sum_probs=28.3

Q ss_pred             eeeeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCC
Q psy9184         265 NCKKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSD  319 (562)
Q Consensus       265 ~~~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h  319 (562)
                      .++.|+.|-...+|++      ..+++|+.........         ...+|..+++.|..
T Consensus       112 ~i~~lsgG~tN~~y~v~~~~~~~~~vLRi~g~~~~~~i---------dR~~E~~vl~~L~~  163 (458)
T 2qg7_A          112 EFQIINGGITNILIKVKDMSKQAKYLIRLYGPKTDEII---------NREREKKISCILYN  163 (458)
T ss_dssp             EEEEECC--CEEEEEEEETTTTEEEEEEEECC-CCSCS---------CHHHHHHHHHHHTT
T ss_pred             EEEEcCCCeEeEEEEEEECCCCceEEEEECCCChhhhc---------CHHHHHHHHHHHHh
Confidence            4578888888999998      2577887643211100         11478888888876

>3i1a_A Spectinomycin phosphotransferase; protein kinase, aminoglycoside phosphotransferase, antibiotic resistance; HET: MES PG4; 1.70A {Legionella pneumophila} PDB: 3i0q_A* 3i0o_A* 3q2m_A*

Probab=84.91  E-value=0.31  Score=49.68  Aligned_cols=33  Identities=27%  Similarity=0.379  Sum_probs=27.7

Q ss_pred             CCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeec
Q psy9184         416 LEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFV  468 (562)
Q Consensus       416 ~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~  468 (562)
                      ..++|+|++|.|||++.++                    .+.|+||+.+....
T Consensus       206 ~~~~HgD~~~~N~l~~~~~--------------------~~~~iD~e~~~~~~  238 (339)
T 3i1a_A          206 YVLCHSDIHAGNVLVGNEE--------------------SIYIIDWDEPMLAP  238 (339)
T ss_dssp             CEEECSCCCGGGEEECGGG--------------------CEEECCCSSCEEEC
T ss_pred             ceeEeCCCCcCCEEEeCCC--------------------eEEEEECCCCeeCC
Confidence            3599999999999998754                    58999999887654

>3c5i_A Choline kinase; choline, kinase, malaria, transferase, structural genomics, structural genomics consortium; 2.20A {Plasmodium knowlesi} PDB: 3fi8_A*

Probab=84.56  E-value=0.38  Score=49.24  Aligned_cols=31  Identities=32%  Similarity=0.425  Sum_probs=25.5

Q ss_pred             CeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeec
Q psy9184         417 EFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFV  468 (562)
Q Consensus       417 ~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~  468 (562)
                      .++|+|+++.|||++.+                     .+.|+||..|..-.
T Consensus       213 ~l~HgDl~~~Nil~~~~---------------------~~~lID~e~a~~g~  243 (369)
T 3c5i_A          213 VFCHNDLQENNIINTNK---------------------CLRLIDFEYSGFNF  243 (369)
T ss_dssp             EEECSCCCGGGEEECC----------------------CEEECCCTTCEEEE
T ss_pred             EEEeCCCCcccEEecCC---------------------cEEEEEecCCCCCc
Confidence            48999999999999754                     48999999887543

>1nw1_A Choline kinase (49.2 KD); phospholipid synthesis, protein kinase fold, transferase; 2.02A {Caenorhabditis elegans} SCOP: d.144.1.8

Probab=83.38  E-value=0.36  Score=51.11  Aligned_cols=17  Identities=41%  Similarity=0.626  Sum_probs=14.9

Q ss_pred             CeEeccCCCCCEEEccC
Q psy9184         417 EFEHRDLHMSNILVLQT  433 (562)
Q Consensus       417 ~IiHRDLKpeNILl~~~  433 (562)
                      .++|+|+++.|||++.+
T Consensus       250 v~~H~Dl~~gNiL~~~~  266 (429)
T 1nw1_A          250 TFCHNDLQEGNILLPKA  266 (429)
T ss_dssp             EEECSCCCGGGEEEEC-
T ss_pred             EEEeCCCCCCeEEeeCC
Confidence            48999999999999875

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	562
d1phka_	277	d.144.1.7 (A:) gamma-subunit of glycogen phosphory	2e-05
d1u5ra_	309	d.144.1.7 (A:) Serine/threonine protein kinase TAO	3e-04
d1xwsa_	273	d.144.1.7 (A:) Proto-oncogene serine/threonine-pro	5e-04
d1uwha_	276	d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens)	0.002
d1s9ja_	322	d.144.1.7 (A:) Dual specificity mitogen-activated	0.003

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

 Score = 43.9 bits (103), Expect = 2e-05
 Identities = 30/187 (16%), Positives = 62/187 (33%), Gaps = 54/187 (28%)

Query: 254 FEDRYPSSALKNCKKIGEGVYGEVFK-----LNNSV-IKIMPIEGDQSVNGEEQKKFREI 307
           F + Y     +  + +G GV   V +           +KI+ + G  S + EE ++ RE 
Sbjct: 1   FYENY-----EPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREA 55

Query: 308 F-SEIMVTKETSDLQYRTENSTPCFTELLKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHP 366
              E+ + ++ S                             ++ L + +           
Sbjct: 56  TLKEVDILRKVSG-------------------------HPNIIQLKDTY----------- 79

Query: 367 SMFEEDQIFIILELKNGGNDSGDIKYR---SPNQTYAMILQVVFSLAVAEVELEFEHRDL 423
                   F++ +L   G     +  +   S  +T  ++  ++  +     +L   HRDL
Sbjct: 80  --ETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVICALH-KLNIVHRDL 136

Query: 424 HMSNILV 430
              NIL+
Sbjct: 137 KPENILL 143

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 309

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 40.8 bits (95), Expect = 3e-04
 Identities = 32/186 (17%), Positives = 58/186 (31%), Gaps = 54/186 (29%)

Query: 254 FEDRYPSSALKNCKKIGEGVYGEVFK-----LNNSV-IKIMPIEGDQSVNGEEQKKFREI 307
           F    P     + ++IG G +G V+       +  V IK M   G QS      +K+++I
Sbjct: 8   FFKDDPEKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQS-----NEKWQDI 62

Query: 308 FSEIMVTKETSDLQYRTENSTPCFTELLKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPS 367
             E+   +     + R  N                      +     +            
Sbjct: 63  IKEVRFLQ-----KLRHPN---------------------TIQYRGCY------------ 84

Query: 368 MFEEDQIFIILELKNGGNDSGDIKYRSP---NQTYAMILQVVFSLAVAEVELEFEHRDLH 424
              E   ++++E   G        ++ P    +  A+    +  LA         HRD+ 
Sbjct: 85  -LREHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLH-SHNMIHRDVK 142

Query: 425 MSNILV 430
             NIL+
Sbjct: 143 AGNILL 148

>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Proto-oncogene serine/threonine-protein kinase Pim-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.7 bits (92), Expect = 5e-04
 Identities = 32/198 (16%), Positives = 58/198 (29%), Gaps = 52/198 (26%)

Query: 254 FEDRYPSSALKNCKKIGEGVYGEVFK----LNNSVIKIMPIEGDQSVNGEEQKKFREIFS 309
            E +Y     +    +G G +G V+      +N  + I  +E D+  +  E      +  
Sbjct: 2   LESQY-----QVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM 56

Query: 310 EIMVTKETSDLQYRTENSTPCFTELLKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMF 369
           E+++ K+                       V   +   ++ L + F              
Sbjct: 57  EVVLLKK-----------------------VSSGFSG-VIRLLDWF-------------E 79

Query: 370 EEDQIFIILELKNGGNDSGDIKYRSPNQTYAMILQVVFSLAVA---EVELEFEHRDLHMS 426
             D   +ILE      D  D           +     + +  A          HRD+   
Sbjct: 80  RPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDE 139

Query: 427 NILVLQTDQDESSFTLDD 444
           NIL+   D +     L D
Sbjct: 140 NILI---DLNRGELKLID 154

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 276

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.6 bits (87), Expect = 0.002
 Identities = 23/170 (13%), Positives = 52/170 (30%), Gaps = 52/170 (30%)

Query: 267 KKIGEGVYGEVFK--LNNSV-IKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYR 323
           ++IG G +G V+K   +  V +K++ +           ++ +   +E+ V +     + R
Sbjct: 14  QRIGSGSFGTVYKGKWHGDVAVKMLNVTAP------TPQQLQAFKNEVGVLR-----KTR 62

Query: 324 TENSTPCFTELLKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNG 383
             N                     ++                       Q+ I+ +   G
Sbjct: 63  HVN---------------------ILLFMG--------------YSTAPQLAIVTQWCEG 87

Query: 384 GNDSGDIKYRSPNQTYAMILQVVFSLAVAEVELEFE---HRDLHMSNILV 430
            +    +           ++ +    A     L  +   HRDL  +NI +
Sbjct: 88  SSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFL 137

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.7 bits (87), Expect = 0.003
 Identities = 32/214 (14%), Positives = 66/214 (30%), Gaps = 75/214 (35%)

Query: 267 KKIGEGVYGEVFKLNNS------VIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDL 320
            ++G G  G VFK+++         K++ +E   ++         +I  E+ V       
Sbjct: 12  SELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIR-------NQIIRELQVLH----- 59

Query: 321 QYRTENSTPCFTELLKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILEL 380
           +  +                       +V  +  F             + + +I I +E 
Sbjct: 60  ECNSPY---------------------IVGFYGAF-------------YSDGEISICMEH 85

Query: 381 KNGGNDSGDIKYR---SPNQTYAMILQVVFSLAVAEVELEFEHRDLHMSNILVLQTDQDE 437
            +GG+    +K            + + V+  L     + +  HRD+  SNILV       
Sbjct: 86  MDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRG--- 142

Query: 438 SSFTLDDTHYAMKTAGVQVTIIDFTISRCFVGEK 471
                            ++ + DF +S   +   
Sbjct: 143 -----------------EIKLCDFGVSGQLIDSM 159

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	562
d1nvra_	271	Cell cycle checkpoint kinase chk1 {Human (Homo sap	100.0
d1yhwa1	293	pak1 {Human (Homo sapiens) [TaxId: 9606]}	100.0
d2j4za1	263	Aurora-related kinase 1 (aurora-2) {Human (Homo sa	100.0
d1t4ha_	270	Protein kinase wnk1 {Human (Homo sapiens) [TaxId:	100.0
d1uu3a_	288	3-phosphoinositide dependent protein kinase-1 Pdk1	100.0
d1u5ra_	309	Serine/threonine protein kinase TAO2 {Rat (Rattus	100.0
d2jfla1	288	STE20-like serine/threonine-protein kinase, SLK {H	100.0
d1o6la_	337	Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9	100.0
d1s9ja_	322	Dual specificity mitogen-activated protein kinase	100.0
d1koba_	352	Twitchin, kinase domain {California sea hare (Aply	100.0
d2java1	269	Serine/threonine-protein kinase Nek2 {Human (Homo	100.0
d1koaa2	350	Twitchin, kinase domain {Caenorhabditis elegans, p	100.0
d1a06a_	307	Calmodulin-dependent protein kinase {Rat (Rattus n	100.0
d1fota_	316	cAMP-dependent PK, catalytic subunit {Baker's yeas	100.0
d1rdqe_	350	cAMP-dependent PK, catalytic subunit {Mouse (Mus m	100.0
d1uwha_	276	B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}	100.0
d1jksa_	293	Death-associated protein kinase, Dap {Human (Homo	100.0
d1tkia_	321	Titin, kinase domain {Human (Homo sapiens) [TaxId:	100.0
d1opja_	287	Abelsone tyrosine kinase (abl) {Mouse (Mus musculu	100.0
d1rjba_	325	Fl cytokine receptor {Human (Homo sapiens) [TaxId:	100.0
d1o6ya_	277	Mycobacterial protein kinase PknB, catalytic domai	100.0
d1qpca_	272	Lymphocyte kinase (lck) {Human (Homo sapiens) [Tax	100.0
d1jpaa_	299	ephb2 receptor tyrosine kinase {Mouse (Mus musculu	100.0
d1phka_	277	gamma-subunit of glycogen phosphorylase kinase (Ph	100.0
d1sm2a_	263	Tyrosine-protein kinase Itk/Tsk {Human (Homo sapie	100.0
d2ozaa1	335	MAP kinase activated protein kinase 2, mapkap2 {Hu	99.98
d1omwa3	364	G-protein coupled receptor kinase 2 {Cow (Bos taur	99.98
d1ywna1	299	Vascular endothelial growth factor receptor 2 (kdr	99.97
d1xjda_	320	Protein kinase C, theta type {Human (Homo sapiens)	99.97
d1mqba_	283	epha2 receptor tyrosine kinase {Human (Homo sapien	99.97
d1u59a_	285	Tyrosine-protein kinase ZAP-70 {Human (Homo sapien	99.97
d3bqca1	328	Protein kinase CK2, alpha subunit {Rattus norvegic	99.97
d1xbba_	277	Tyrosine-protein kinase SYK {Human (Homo sapiens)	99.97
d1gz8a_	298	Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [T	99.97
d1k2pa_	258	Bruton's tyrosine kinase (Btk) {Human (Homo sapien	99.97
d1ua2a_	299	Cell division protein kinase 7, CDK7 {Human (Homo	99.97
d1mp8a_	273	Focal adhesion kinase 1 (fak) {Human (Homo sapiens	99.97
d1xwsa_	273	Proto-oncogene serine/threonine-protein kinase Pim	99.97
d1fmka3	285	c-src tyrosine kinase {Human (Homo sapiens) [TaxId	99.97
d1u46a_	273	Activated CDC42 kinase 1, ACK1 {Human (Homo sapien	99.97
d1lufa_	301	Musk tyrosine kinase {Rat (Rattus norvegicus) [Tax	99.97
d1xkka_	317	EGF receptor tyrosine kinase, Erbb-1 {Human (Homo	99.97
d1ob3a_	286	Cyclin-dependent PK, CDK2 {(Plasmodium falciparum)	99.97
d1blxa_	305	Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [T	99.97
d1cm8a_	346	MAP kinase p38-gamma {Human (Homo sapiens) [TaxId:	99.96
d1pmea_	345	MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606	99.96
d1t46a_	311	c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]	99.96
d1fgka_	299	Fibroblast growth factor receptor 1 {Human (Homo s	99.96
d1unla_	292	Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [T	99.96
d1q5ka_	350	Glycogen synthase kinase-3 beta (Gsk3b) {Human (Ho	99.96
d1fvra_	309	Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}	99.96
d2b1pa1	355	c-jun N-terminal kinase (jnk3s) {Human (Homo sapie	99.96
d1vzoa_	322	Ribosomal protein S6 kinase alpha 5, Msk1 {Human (	99.96
d1p4oa_	308	Insulin-like growth factor 1 receptor {Human (Homo	99.96
d3blha1	318	Cell division protein kinase 9, CDK9 {Human (Homo	99.96
d1r0pa_	311	Hepatocyte growth factor receptor, c-MET {Human (H	99.96
d2gfsa1	348	MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]	99.96
d1byga_	262	Carboxyl-terminal src kinase (csk) {Human (Homo sa	99.96
d1ckia_	299	Casein kinase-1, CK1 {Rat (Rattus norvegicus) [Tax	99.95
d1vjya_	303	Type I TGF-beta receptor R4 {Human (Homo sapiens)	99.95
d1csna_	293	Casein kinase-1, CK1 {Fission yeast (Schizosacchar	99.95
d1q8ya_	362	Sky1p {Baker's yeast (Saccharomyces cerevisiae) [T	99.93
d1zara2	191	Rio2 serine protein kinase C-terminal domain {Arch	99.86
d1j7la_	263	Type IIIa 3',5"-aminoglycoside phosphotransferase	98.04
d2pula1	392	Methylthioribose kinase MtnK {Bacillus subtilis [T	97.24
d1nd4a_	255	Aminoglycoside 3'-phosphotransferase IIa (Kanamyci	97.21
d1zyla1	325	RdoA {Escherichia coli [TaxId: 562]}	95.75
d1nw1a_	395	Choline kinase {Caenorhabditis elegans [TaxId: 623	94.88
d2ppqa1	316	Homoserine kinase ThrB {Agrobacterium tumefaciens	94.63

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.8e-36  Score=303.56  Aligned_cols=230  Identities=18%  Similarity=0.166  Sum_probs=168.8

Q ss_pred             CCCceeeeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCccccc
Q psy9184         261 SALKNCKKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTEL  334 (562)
Q Consensus       261 ~~y~~~~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~l  334 (562)
                      ++|++++.||+|+||+||+|      +.||||++.....       ....+.+.+|+.+|+.++|               
T Consensus         5 ~dy~~~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~-------~~~~~~~~~Ei~~l~~l~H---------------   62 (271)
T d1nvra_           5 EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRA-------VDCPENIKKEICINKMLNH---------------   62 (271)
T ss_dssp             TEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC--------------CHHHHHHHHHTCCC---------------
T ss_pred             cceEEEEEEecCcCeEEEEEEECCCCCEEEEEEEehhhc-------chHHHHHHHHHHHHHhCCC---------------
Confidence            57999999999999999999      7899999986531       2223568899999999998               


Q ss_pred             ccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc---cCCHHHHHHHHHHHHHHHHH
Q psy9184         335 LKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK---YRSPNQTYAMILQVVFSLAV  411 (562)
Q Consensus       335 ~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~---~l~e~~i~~I~~QIl~aL~y  411 (562)
                                 |||++++++|.+             ++.+|||||||+||++.+.+.   .+++.+++.++.||+.||.|
T Consensus        63 -----------pnIv~~~~~~~~-------------~~~~~ivmEy~~gg~L~~~l~~~~~l~e~~~~~i~~qi~~al~y  118 (271)
T d1nvra_          63 -----------ENVVKFYGHRRE-------------GNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVY  118 (271)
T ss_dssp             -----------TTBCCEEEEEEE-------------TTEEEEEEECCTTEEGGGGSBTTTBCCHHHHHHHHHHHHHHHHH
T ss_pred             -----------CCEeeEeeeecc-------------CceeEEEEeccCCCcHHHHHhcCCCCCHHHHHHHHHHHHHHHHH
Confidence                       999999999986             568999999999998888775   38999999999999999999


Q ss_pred             HHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecC-------CcEEEeecCCCcccc
Q psy9184         412 AEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVG-------EKICYYDLSQDEELF  484 (562)
Q Consensus       412 LH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~-------~g~v~~~l~~~pelF  484 (562)
                      ||+ +||+||||||+|||++.++                    .+||+|||+|+....       ...+++..|++||++
T Consensus       119 lH~-~~IiHrDiKp~NILl~~~~--------------------~~KL~DFG~a~~~~~~~~~~~~~~~~GT~~Y~APE~~  177 (271)
T d1nvra_         119 LHG-IGITHRDIKPENLLLDERD--------------------NLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELL  177 (271)
T ss_dssp             HHH-TTEECSCCCGGGEEECTTC--------------------CEEECCCTTCEECEETTEECCBCCCCSCGGGSCTHHH
T ss_pred             HHH-cCCccCcccHHHEEECCCC--------------------CEEEccchhheeeccCCccccccceeeCcCccCHhHh
Confidence            999 7999999999999999886                    799999999997642       344678899999999


Q ss_pred             CCCCC--cHHHHHHHhhcccCCCCCCCCCCChhhhHHHHHHHHhhcccCCCCCCCchhHHHHHHHHHHHhcCCCcCcCCC
Q psy9184         485 EGEGD--YQFDMYRMMRKQCQNNWQNFTPKNNVFWIHYLVDKATCLKKGYQYLRAPRHQAFELLEELGQNALHFDSCYEM  562 (562)
Q Consensus       485 ~g~~~--~q~dIy~lm~~~~~~~W~~~~P~tn~~wl~yl~~~Ll~~~~~~~~~~~~~~~~~~~l~~l~~~~l~~~s~~~~  562 (562)
                      .+...  ...|||++.-... ....+..|+....-.......... ...+..+..   ..-..+.+|..+||.++...|+
T Consensus       178 ~~~~~~~~~~DiwSlGvily-eml~G~~pf~~~~~~~~~~~~~~~-~~~~~~~~~---~~s~~~~~li~~~L~~dP~~R~  252 (271)
T d1nvra_         178 KRREFHAEPVDVWSCGIVLT-AMLAGELPWDQPSDSCQEYSDWKE-KKTYLNPWK---KIDSAPLALLHKILVENPSARI  252 (271)
T ss_dssp             HCSSBCHHHHHHHHHHHHHH-HHHHSSCSCSSSSTTSHHHHHHHT-TCTTSTTGG---GSCHHHHHHHHHHSCSSTTTSC
T ss_pred             cCCCCCCCceeeeHhHHHHH-HHHhCCCCCCCCChHHHHHHHHhc-CCCCCCccc---cCCHHHHHHHHHHcCCChhHCc
Confidence            87543  3489988543332 233333343111000000111122 122222211   1134566788999998887763

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=6.1e-36  Score=304.34  Aligned_cols=231  Identities=19%  Similarity=0.231  Sum_probs=178.0

Q ss_pred             CCCCCceeeeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCccc
Q psy9184         259 PSSALKNCKKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFT  332 (562)
Q Consensus       259 ~~~~y~~~~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv  332 (562)
                      +..+|++.++||+|+||+||+|      +.||||++....        ....+.+.+|+.+++.++|             
T Consensus        18 p~~~Y~~~~~iG~G~fg~Vy~a~~~~~~~~vAvK~~~~~~--------~~~~~~~~~E~~il~~l~H-------------   76 (293)
T d1yhwa1          18 PKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQ--------QPKKELIINEILVMRENKN-------------   76 (293)
T ss_dssp             TTTTBCSCEECCCSSSCEEEEEEBTTTCCEEEEEEEEGGG--------CSCHHHHHHHHHHHHHCCC-------------
T ss_pred             cccccEEEEEEecCcCcEEEEEEECCCCCEEEEEEEeccc--------ChHHHHHHHHHHHHHhCCC-------------
Confidence            3468999999999999999999      899999998653        1223578999999999998             


Q ss_pred             ccccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc--cCCHHHHHHHHHHHHHHHH
Q psy9184         333 ELLKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK--YRSPNQTYAMILQVVFSLA  410 (562)
Q Consensus       333 ~l~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~--~l~e~~i~~I~~QIl~aL~  410 (562)
                                   ||||+++++|.+             ++.+|+|||||+||++.+.+.  .+++.+++.++.||+.||.
T Consensus        77 -------------pnIv~~~~~~~~-------------~~~~~ivmEy~~gg~L~~~~~~~~l~~~~~~~i~~qi~~aL~  130 (293)
T d1yhwa1          77 -------------PNIVNYLDSYLV-------------GDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQALE  130 (293)
T ss_dssp             -------------TTBCCEEEEEEE-------------TTEEEEEEECCTTCBHHHHHHHSCCCHHHHHHHHHHHHHHHH
T ss_pred             -------------CCEeeEeEEEEE-------------CCEEEEEEEecCCCcHHHHhhccCCCHHHHHHHHHHHHHHHH
Confidence                         999999999986             568999999999998765543  4899999999999999999


Q ss_pred             HHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecC-----CcEEEeecCCCccccC
Q psy9184         411 VAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVG-----EKICYYDLSQDEELFE  485 (562)
Q Consensus       411 yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~-----~g~v~~~l~~~pelF~  485 (562)
                      |||+ +||+||||||+|||++.++                    .+||+|||+|+....     ...+++..|++||++.
T Consensus       131 yLH~-~~iiHrDiKp~NILl~~~~--------------------~vkl~DFG~a~~~~~~~~~~~~~~gt~~Y~aPE~~~  189 (293)
T d1yhwa1         131 FLHS-NQVIHRDIKSDNILLGMDG--------------------SVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVT  189 (293)
T ss_dssp             HHHH-TTEECCCCSGGGEEECTTC--------------------CEEECCCTTCEECCSTTCCBCCCCSCGGGCCHHHHS
T ss_pred             HHHH-CCCcccCCcHHHeEECCCC--------------------cEeeccchhheeeccccccccccccCCCccChhhhc
Confidence            9999 7999999999999999886                    799999999998753     3445788999999998


Q ss_pred             CC-CCcHHHHHHHhhcccCCCCCCCCCCChhhhHHHHHHHHhhcccCCCCCCCchhHHHHHHHHHHHhcCCCcCcCCC
Q psy9184         486 GE-GDYQFDMYRMMRKQCQNNWQNFTPKNNVFWIHYLVDKATCLKKGYQYLRAPRHQAFELLEELGQNALHFDSCYEM  562 (562)
Q Consensus       486 g~-~~~q~dIy~lm~~~~~~~W~~~~P~tn~~wl~yl~~~Ll~~~~~~~~~~~~~~~~~~~l~~l~~~~l~~~s~~~~  562 (562)
                      +. .+...|||++ |........+..|+.+..-...+..........++.+    ...-..+++|.+++|..+...|+
T Consensus       190 ~~~~~~~~DiwSl-GvilyemltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~----~~~s~~~~~li~~~L~~dP~~R~  262 (293)
T d1yhwa1         190 RKAYGPKVDIWSL-GIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNP----EKLSAIFRDFLNRCLDMDVEKRG  262 (293)
T ss_dssp             SSCBCTHHHHHHH-HHHHHHHHHSSCTTTTSCHHHHHHHHHHHCSCCCSSG----GGSCHHHHHHHHHHTCSSTTTSC
T ss_pred             CCCCCchhceehH-hHHHHHHhhCCCCCCCCCHHHHHHHHHhCCCCCCCCc----ccCCHHHHHHHHHHccCChhHCc
Confidence            84 5677999875 4444455566667654332332322222201111111    12235678889999998887763

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=9e-36  Score=298.42  Aligned_cols=229  Identities=16%  Similarity=0.203  Sum_probs=177.6

Q ss_pred             CCCceeeeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCccccc
Q psy9184         261 SALKNCKKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTEL  334 (562)
Q Consensus       261 ~~y~~~~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~l  334 (562)
                      ++|++.+.||+|+||+||+|      +.||+|++....     .......+.+.+|+.+++.++|               
T Consensus         6 ~dy~i~~~iG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~-----~~~~~~~~~~~~E~~il~~l~h---------------   65 (263)
T d2j4za1           6 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQ-----LEKAGVEHQLRREVEIQSHLRH---------------   65 (263)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHH-----HHHTTCHHHHHHHHHHHHTCCC---------------
T ss_pred             hHeEEEEEEecCCCcEEEEEEECCCCcEEEEEEEchHH-----ccChHHHHHHHHHHHHHHhcCC---------------
Confidence            67999999999999999999      799999998542     1223345678899999999998               


Q ss_pred             ccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc---cCCHHHHHHHHHHHHHHHHH
Q psy9184         335 LKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK---YRSPNQTYAMILQVVFSLAV  411 (562)
Q Consensus       335 ~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~---~l~e~~i~~I~~QIl~aL~y  411 (562)
                                 |||++++++|.+             ++.+|+|||||+||++.+.+.   .+++.+++.++.||+.||+|
T Consensus        66 -----------pnIv~~~~~~~~-------------~~~~~ivmEy~~~g~L~~~l~~~~~l~e~~~~~i~~qi~~al~~  121 (263)
T d2j4za1          66 -----------PNILRLYGYFHD-------------ATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSY  121 (263)
T ss_dssp             -----------TTBCCEEEEEEC-------------SSEEEEEEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHH
T ss_pred             -----------CCCCeEEEEEEE-------------CCEEEEEEeecCCCcHHHHHhhcCCCCHHHHHHHHHHHHHHHHH
Confidence                       999999999986             568999999999998876664   49999999999999999999


Q ss_pred             HHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecC---CcEEEeecCCCccccCCC-
Q psy9184         412 AEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVG---EKICYYDLSQDEELFEGE-  487 (562)
Q Consensus       412 LH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~---~g~v~~~l~~~pelF~g~-  487 (562)
                      ||+ .||+||||||+|||++.++                    .+||+|||+|+....   ....++..|++||++.+. 
T Consensus       122 lH~-~~ivHrDiKp~Nill~~~~--------------------~~kl~DFG~a~~~~~~~~~~~~Gt~~Y~APE~~~~~~  180 (263)
T d2j4za1         122 CHS-KRVIHRDIKPENLLLGSAG--------------------ELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRM  180 (263)
T ss_dssp             HHH-TTCCCCCCCGGGEEECTTS--------------------CEEECCCCSCSCCCCCCCEETTEEGGGCCHHHHTTCC
T ss_pred             HHH-CCeeeeeeccccceecCCC--------------------CEeecccceeeecCCCcccccCCCCcccCHHHHcCCC
Confidence            999 7999999999999999887                    799999999987654   223468899999999985 


Q ss_pred             CCcHHHHHHHhhcccCCCCCCCCCCChhhhHHHHHHHHhhcccCCCCCCCchhHHHHHHHHHHHhcCCCcCcCCC
Q psy9184         488 GDYQFDMYRMMRKQCQNNWQNFTPKNNVFWIHYLVDKATCLKKGYQYLRAPRHQAFELLEELGQNALHFDSCYEM  562 (562)
Q Consensus       488 ~~~q~dIy~lm~~~~~~~W~~~~P~tn~~wl~yl~~~Ll~~~~~~~~~~~~~~~~~~~l~~l~~~~l~~~s~~~~  562 (562)
                      ++..+|||++.- .+.....+..|+.... ..-+..........++..-      -..+.+|...+|..+...|+
T Consensus       181 ~~~~~DiwSlGv-ilyell~G~~Pf~~~~-~~~~~~~i~~~~~~~p~~~------s~~~~~li~~~L~~dp~~R~  247 (263)
T d2j4za1         181 HDEKVDLWSLGV-LCYEFLVGKPPFEANT-YQETYKRISRVEFTFPDFV------TEGARDLISRLLKHNPSQRP  247 (263)
T ss_dssp             CCTTHHHHHHHH-HHHHHHHSSCTTCCSS-HHHHHHHHHTTCCCCCTTS------CHHHHHHHHHHTCSSGGGSC
T ss_pred             CCchhhhhhHhH-HHHHHhcCCCCCCCCC-HHHHHHHHHcCCCCCCccC------CHHHHHHHHHHccCCHhHCc
Confidence            566799988543 3334555666664332 1222333344122233221      24677889999999887763

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3e-35  Score=295.73  Aligned_cols=236  Identities=15%  Similarity=0.108  Sum_probs=177.0

Q ss_pred             CCC-ceeeeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCcccc
Q psy9184         261 SAL-KNCKKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTE  333 (562)
Q Consensus       261 ~~y-~~~~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~  333 (562)
                      ++| ++.++||+|+||+||+|      ..||+|++....      ......+.+.+|+.+|+.++|              
T Consensus         8 gry~~~~~~iG~G~fg~Vy~~~~~~~~~~va~K~i~~~~------~~~~~~~~~~~E~~il~~l~H--------------   67 (270)
T d1t4ha_           8 GRFLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRK------LTKSERQRFKEEAEMLKGLQH--------------   67 (270)
T ss_dssp             SCEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGG------SCHHHHHHHHHHHHHHTTCCC--------------
T ss_pred             CCEEEeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhh------CCHHHHHHHHHHHHHHHhCCC--------------
Confidence            344 67789999999999999      689999998653      123445678999999999998              


Q ss_pred             cccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc---cCCHHHHHHHHHHHHHHHH
Q psy9184         334 LLKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK---YRSPNQTYAMILQVVFSLA  410 (562)
Q Consensus       334 l~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~---~l~e~~i~~I~~QIl~aL~  410 (562)
                                  ||||+++++|.+..         ..+..+|+|||||+||++.+.+.   .+++.+++.++.||+.||+
T Consensus        68 ------------pnIv~~~~~~~~~~---------~~~~~~~ivmE~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~gl~  126 (270)
T d1t4ha_          68 ------------PNIVRFYDSWESTV---------KGKKCIVLVTELMTSGTLKTYLKRFKVMKIKVLRSWCRQILKGLQ  126 (270)
T ss_dssp             ------------TTBCCEEEEEEEES---------SSCEEEEEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHH
T ss_pred             ------------CCeeeEEEEEeecc---------ccCCEEEEEEeCCCCCcHHHHHhccccccHHHHHHHHHHHHHHHH
Confidence                        99999999986521         12457899999999998877664   4899999999999999999


Q ss_pred             HHHhhCC--eEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecC---CcEEEeecCCCccccC
Q psy9184         411 VAEVELE--FEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVG---EKICYYDLSQDEELFE  485 (562)
Q Consensus       411 yLH~~~~--IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~---~g~v~~~l~~~pelF~  485 (562)
                      |||+ .+  |+||||||+|||++....                   .+||+|||+|+....   .+.+++..|++||++.
T Consensus       127 yLH~-~~~~IiHrDiKp~NILl~~~~~-------------------~~Kl~DFGla~~~~~~~~~~~~GT~~Y~aPE~~~  186 (270)
T d1t4ha_         127 FLHT-RTPPIIHRDLKCDNIFITGPTG-------------------SVKIGDLGLATLKRASFAKAVIGTPEFMAPEMYE  186 (270)
T ss_dssp             HHHT-SSSCCCCSCCCGGGEEESSTTS-------------------CEEECCTTGGGGCCTTSBEESCSSCCCCCGGGGG
T ss_pred             HHHH-CCCCEEeCCcChhhceeeCCCC-------------------CEEEeecCcceeccCCccCCcccCccccCHHHhC
Confidence            9999 68  999999999999975321                   799999999986554   2345688999999999


Q ss_pred             CCCCcHHHHHHHhhcccCCCCCCCCCCChhhhHHHHHHHHhhcccCCCCCCCchhHHHHHHHHHHHhcCCCcCcCCC
Q psy9184         486 GEGDYQFDMYRMMRKQCQNNWQNFTPKNNVFWIHYLVDKATCLKKGYQYLRAPRHQAFELLEELGQNALHFDSCYEM  562 (562)
Q Consensus       486 g~~~~q~dIy~lm~~~~~~~W~~~~P~tn~~wl~yl~~~Ll~~~~~~~~~~~~~~~~~~~l~~l~~~~l~~~s~~~~  562 (562)
                      +..+..+|||++.- .....+.+..|+....-..-+...+.. +.......   ......+.+|..++|.++...|.
T Consensus       187 ~~~~~~~DIwSlGv-ilyel~~g~~Pf~~~~~~~~~~~~i~~-~~~~~~~~---~~~~~~~~~li~~~l~~dp~~R~  258 (270)
T d1t4ha_         187 EKYDESVDVYAFGM-CMLEMATSEYPYSECQNAAQIYRRVTS-GVKPASFD---KVAIPEVKEIIEGCIRQNKDERY  258 (270)
T ss_dssp             TCCCTHHHHHHHHH-HHHHHHHSSCTTTTCSSHHHHHHHHTT-TCCCGGGG---GCCCHHHHHHHHHHSCSSGGGSC
T ss_pred             CCCCCcCchhhHHH-HHHHHHHCCCCCCCcccHHHHHHHHHc-CCCCcccC---ccCCHHHHHHHHHHccCCHhHCc
Confidence            98888899988644 333555566666433223333444444 21111111   01134678899999999887763

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2e-35  Score=299.78  Aligned_cols=228  Identities=18%  Similarity=0.162  Sum_probs=176.2

Q ss_pred             CCCceeeeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCccccc
Q psy9184         261 SALKNCKKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTEL  334 (562)
Q Consensus       261 ~~y~~~~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~l  334 (562)
                      ++|++++.||+|+||+||+|      +.||||++....     .......+.+.+|+.++++++|               
T Consensus         8 ~dy~i~~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~-----~~~~~~~~~~~~E~~il~~l~H---------------   67 (288)
T d1uu3a_           8 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRH-----IIKENKVPYVTRERDVMSRLDH---------------   67 (288)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHH-----HHHTTCHHHHHHHHHHHHHCCS---------------
T ss_pred             CCCEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehHH-----ccCHHHHHHHHHHHHHHHHcCC---------------
Confidence            57999999999999999999      789999998642     2223345678999999999998               


Q ss_pred             ccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc---cCCHHHHHHHHHHHHHHHHH
Q psy9184         335 LKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK---YRSPNQTYAMILQVVFSLAV  411 (562)
Q Consensus       335 ~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~---~l~e~~i~~I~~QIl~aL~y  411 (562)
                                 |||++++++|.+             ++.+|+|||||+||++.+.+.   .+++.+++.++.||+.||+|
T Consensus        68 -----------pnIv~l~~~~~~-------------~~~~~ivmEy~~gg~L~~~~~~~~~l~e~~~~~~~~qi~~al~y  123 (288)
T d1uu3a_          68 -----------PFFVKLYFTFQD-------------DEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEY  123 (288)
T ss_dssp             -----------TTBCCEEEEEEC-------------SSEEEEEECCCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHH
T ss_pred             -----------CCeeEEEEEEEE-------------CCEEEEEEEccCCCCHHHhhhccCCCCHHHHHHHHHHHHHHHHh
Confidence                       999999999986             568999999999998876654   49999999999999999999


Q ss_pred             HHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecC-------CcEEEeecCCCcccc
Q psy9184         412 AEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVG-------EKICYYDLSQDEELF  484 (562)
Q Consensus       412 LH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~-------~g~v~~~l~~~pelF  484 (562)
                      ||+ +||+||||||+|||++.++                    .+||+|||+|+....       ...+++..|++||++
T Consensus       124 lH~-~~iiHrDiKp~NIll~~~~--------------------~vkl~DFG~a~~~~~~~~~~~~~~~~GT~~Y~APE~~  182 (288)
T d1uu3a_         124 LHG-KGIIHRDLKPENILLNEDM--------------------HIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELL  182 (288)
T ss_dssp             HHH-TTEECSCCSGGGEEECTTS--------------------CEEECCCTTCEECC----------CCCCGGGCCHHHH
T ss_pred             hcc-ccEEcCcCCccccccCCCc--------------------eEEecccccceecccCCcccccccccCCccccCceee
Confidence            999 7999999999999999887                    799999999997643       234568899999999


Q ss_pred             CCC-CCcHHHHHHHhhcccCCCCCCCCCCChhhhHHHHHHHHhhcccCCCCCCCchhHHHHHHHHHHHhcCCCcCcCC
Q psy9184         485 EGE-GDYQFDMYRMMRKQCQNNWQNFTPKNNVFWIHYLVDKATCLKKGYQYLRAPRHQAFELLEELGQNALHFDSCYE  561 (562)
Q Consensus       485 ~g~-~~~q~dIy~lm~~~~~~~W~~~~P~tn~~wl~yl~~~Ll~~~~~~~~~~~~~~~~~~~l~~l~~~~l~~~s~~~  561 (562)
                      .+. ++..+|||++.-.. .....+..|+.... ...+..+.+.....++..-      -..+.+|.++||..+...|
T Consensus       183 ~~~~~~~~~DiwSlGvil-yell~g~~Pf~~~~-~~~~~~~i~~~~~~~p~~~------s~~~~~li~~~L~~dP~~R  252 (288)
T d1uu3a_         183 TEKSACKSSDLWALGCII-YQLVAGLPPFRAGN-EYLIFQKIIKLEYDFPEKF------FPKARDLVEKLLVLDATKR  252 (288)
T ss_dssp             HTCCCCHHHHHHHHHHHH-HHHHHSSCSSCCSS-HHHHHHHHHTTCCCCCTTC------CHHHHHHHHTTSCSSGGGS
T ss_pred             ccCCCCcccceehhhHHH-HHHhhCCCCCCCcC-HHHHHHHHHcCCCCCCccC------CHHHHHHHHHHccCCHhHC
Confidence            874 56679998864333 33444555664322 1122334444233343322      3467888999999887665

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=1.1e-35  Score=304.60  Aligned_cols=230  Identities=17%  Similarity=0.174  Sum_probs=176.0

Q ss_pred             CCCceeeeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCccccc
Q psy9184         261 SALKNCKKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTEL  334 (562)
Q Consensus       261 ~~y~~~~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~l  334 (562)
                      ..|+.+++||+|+||+||+|      +.||||++....     .......+.+.+|+.+|+.|+|               
T Consensus        15 ~~y~~l~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~-----~~~~~~~~~~~~Ei~il~~l~H---------------   74 (309)
T d1u5ra_          15 KLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSG-----KQSNEKWQDIIKEVRFLQKLRH---------------   74 (309)
T ss_dssp             HHEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEECCS-----SCHHHHHHHHHHHHHHHTTCCC---------------
T ss_pred             HhcEeeEEEecCCCeEEEEEEECCCCcEEEEEEEchhh-----ccCHHHHHHHHHHHHHHHHCCC---------------
Confidence            45899999999999999999      789999998754     2334556789999999999998               


Q ss_pred             ccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCcccc---ccCCHHHHHHHHHHHHHHHHH
Q psy9184         335 LKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDI---KYRSPNQTYAMILQVVFSLAV  411 (562)
Q Consensus       335 ~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l---~~l~e~~i~~I~~QIl~aL~y  411 (562)
                                 ||||+++++|.+             ++.+|+|||||.||++....   ..+++.+++.++.||+.||.|
T Consensus        75 -----------pnIv~~~~~~~~-------------~~~~~iv~E~~~~g~l~~~~~~~~~l~e~~~~~i~~qi~~aL~y  130 (309)
T d1u5ra_          75 -----------PNTIQYRGCYLR-------------EHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAVTHGALQGLAY  130 (309)
T ss_dssp             -----------TTBCCEEEEEEE-------------TTEEEEEEECCSEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHH
T ss_pred             -----------CCEeeEEEEEEE-------------CCEEEEEEEecCCCchHHHHHhCCCCCHHHHHHHHHHHHHHHHH
Confidence                       999999999976             56899999999988653322   248999999999999999999


Q ss_pred             HHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecC-CcEEEeecCCCccccCCC---
Q psy9184         412 AEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVG-EKICYYDLSQDEELFEGE---  487 (562)
Q Consensus       412 LH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~-~g~v~~~l~~~pelF~g~---  487 (562)
                      ||+ .||+||||||+|||++.++                    .+||+|||+|+.... ....++..|++||++.+.   
T Consensus       131 LH~-~~iiHrDiKp~NILl~~~~--------------------~~Kl~DFG~a~~~~~~~~~~GT~~Y~APE~~~~~~~~  189 (309)
T d1u5ra_         131 LHS-HNMIHRDVKAGNILLSEPG--------------------LVKLGDFGSASIMAPANSFVGTPYWMAPEVILAMDEG  189 (309)
T ss_dssp             HHH-TTCBCCCCSGGGEEEETTT--------------------EEEECCCTTCBSSSSBCCCCSCGGGCCHHHHTTTTSC
T ss_pred             HHh-CCEeccCCCcceEEECCCC--------------------CEEEeecccccccCCCCccccCccccCHHHHhccCCC
Confidence            999 7999999999999999886                    899999999987654 445678899999998652   


Q ss_pred             -CCcHHHHHHHhhcccCCCCCCCCCCChhhhHHHHHHHHhhcccCCCCCCCchhHHHHHHHHHHHhcCCCcCcCC
Q psy9184         488 -GDYQFDMYRMMRKQCQNNWQNFTPKNNVFWIHYLVDKATCLKKGYQYLRAPRHQAFELLEELGQNALHFDSCYE  561 (562)
Q Consensus       488 -~~~q~dIy~lm~~~~~~~W~~~~P~tn~~wl~yl~~~Ll~~~~~~~~~~~~~~~~~~~l~~l~~~~l~~~s~~~  561 (562)
                       ++..+|||++.-. ....+.+..|+.+......+...+..  ..+......   .-..+..|.+.+|.++...|
T Consensus       190 ~y~~~~DiwSlGvi-lyel~~g~~Pf~~~~~~~~~~~i~~~--~~~~~~~~~---~s~~~~~li~~~L~~dP~~R  258 (309)
T d1u5ra_         190 QYDGKVDVWSLGIT-CIELAERKPPLFNMNAMSALYHIAQN--ESPALQSGH---WSEYFRNFVDSCLQKIPQDR  258 (309)
T ss_dssp             CBCTHHHHHHHHHH-HHHHHHSSCTTTTSCHHHHHHHHHHS--CCCCCSCTT---SCHHHHHHHHHHTCSSGGGS
T ss_pred             CcCchhhhhhHHHH-HHHHHHCCCCCCCCCHHHHHHHHHhC--CCCCCCCCC---CCHHHHHHHHHHCcCChhHC
Confidence             4556999886444 33455666676554433333332222  111111111   12467788899999888766

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.7e-35  Score=300.12  Aligned_cols=230  Identities=17%  Similarity=0.216  Sum_probs=172.6

Q ss_pred             CCCCCceeeeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCccc
Q psy9184         259 PSSALKNCKKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFT  332 (562)
Q Consensus       259 ~~~~y~~~~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv  332 (562)
                      +.+.|++++.||+|+||+||+|      +.||||++....        ....+.+.+|+.+|+.++|             
T Consensus        10 p~d~Y~i~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~--------~~~~~~~~~E~~il~~l~H-------------   68 (288)
T d2jfla1          10 PEDFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKS--------EEELEDYMVEIDILASCDH-------------   68 (288)
T ss_dssp             GGGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECSS--------SGGGGGTHHHHHHHHHCCC-------------
T ss_pred             cccCeEEeEEEeeCCCcEEEEEEECCCCeEEEEEEECcCC--------HHHHHHHHHHHHHHHhCCC-------------
Confidence            4467899999999999999999      789999998653        2234567899999999998             


Q ss_pred             ccccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc----cCCHHHHHHHHHHHHHH
Q psy9184         333 ELLKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK----YRSPNQTYAMILQVVFS  408 (562)
Q Consensus       333 ~l~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~----~l~e~~i~~I~~QIl~a  408 (562)
                                   ||||+++++|.+             ++.+|+|||||+||++.+.+.    .+++.+++.++.||+.|
T Consensus        69 -------------pnIv~l~~~~~~-------------~~~~~lvmEy~~~g~L~~~~~~~~~~l~e~~~~~i~~qi~~g  122 (288)
T d2jfla1          69 -------------PNIVKLLDAFYY-------------ENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDA  122 (288)
T ss_dssp             -------------TTBCCEEEEEEE-------------TTEEEEEEECCTTEEHHHHHHHHTSCCCHHHHHHHHHHHHHH
T ss_pred             -------------CCCCeEEEEEee-------------CCeEEEEEecCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHH
Confidence                         999999999986             568999999999998766542    38999999999999999


Q ss_pred             HHHHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecC-----CcEEEeecCCCccc
Q psy9184         409 LAVAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVG-----EKICYYDLSQDEEL  483 (562)
Q Consensus       409 L~yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~-----~g~v~~~l~~~pel  483 (562)
                      |.|||+ +||+||||||+|||++.++                    .+||+|||+|+....     ....++..|++||+
T Consensus       123 L~ylH~-~~ivHrDiKp~NIll~~~~--------------------~~Kl~DFG~a~~~~~~~~~~~~~~Gt~~y~APE~  181 (288)
T d2jfla1         123 LNYLHD-NKIIHRDLKAGNILFTLDG--------------------DIKLADFGVSAKNTRTIQRRDSFIGTPYWMAPEV  181 (288)
T ss_dssp             HHHHHH-TTEECCCCSGGGEEECTTS--------------------CEEECCCTTCEECHHHHHHHTCCCSCCTTCCHHH
T ss_pred             HHHHHH-CCEEEeecChhheeECCCC--------------------CEEEEechhhhccCCCcccccccccccccCCHHH
Confidence            999999 7999999999999999886                    799999999987653     45667889999999


Q ss_pred             cCC------CCCcHHHHHHHhhcccCCCCCCCCCCChhhhHHHHHHHHhhcccCCCCCCCchhHHHHHHHHHHHhcCCCc
Q psy9184         484 FEG------EGDYQFDMYRMMRKQCQNNWQNFTPKNNVFWIHYLVDKATCLKKGYQYLRAPRHQAFELLEELGQNALHFD  557 (562)
Q Consensus       484 F~g------~~~~q~dIy~lm~~~~~~~W~~~~P~tn~~wl~yl~~~Ll~~~~~~~~~~~~~~~~~~~l~~l~~~~l~~~  557 (562)
                      +.+      .++..+|||++.-... ....+..|+........+ ..... +.. +.. ......-..+.+|.+++|+.+
T Consensus       182 l~~~~~~~~~y~~k~DiwSlGvily-emltg~~Pf~~~~~~~~~-~~i~~-~~~-~~~-~~~~~~s~~~~~li~~~L~~d  256 (288)
T d2jfla1         182 VMCETSKDRPYDYKADVWSLGITLI-EMAEIEPPHHELNPMRVL-LKIAK-SEP-PTL-AQPSRWSSNFKDFLKKCLEKN  256 (288)
T ss_dssp             HTTCSTTTSSTTTHHHHHHHHHHHH-HHHHSSCTTTTSCGGGHH-HHHHH-SCC-CCC-SSGGGSCHHHHHHHHHHSCSS
T ss_pred             HhhcccCCCCCChhhhHHHHHHHHH-HHhhCCCCCCCCCHHHHH-HHHHc-CCC-CCC-CccccCCHHHHHHHHHHccCC
Confidence            854      2356699988543332 333344444332212222 22233 111 111 111122456778889999988


Q ss_pred             CcCC
Q psy9184         558 SCYE  561 (562)
Q Consensus       558 s~~~  561 (562)
                      ...|
T Consensus       257 p~~R  260 (288)
T d2jfla1         257 VDAR  260 (288)
T ss_dssp             TTTS
T ss_pred             hhHC
Confidence            8766

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=5.6e-35  Score=302.89  Aligned_cols=229  Identities=16%  Similarity=0.160  Sum_probs=177.5

Q ss_pred             CCCceeeeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCccccc
Q psy9184         261 SALKNCKKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTEL  334 (562)
Q Consensus       261 ~~y~~~~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~l  334 (562)
                      ++|++++.||+|+||.||+|      +.||||++.+..     .......+.+.+|+.+|+.++|               
T Consensus         5 ~dy~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~i~k~~-----~~~~~~~~~~~~E~~il~~l~h---------------   64 (337)
T d1o6la_           5 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEV-----IIAKDEVAHTVTESRVLQNTRH---------------   64 (337)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHH-----HHHTTCHHHHHHHHHHHHSCCC---------------
T ss_pred             HhcEEEEEEecCcCeEEEEEEECCCCCEEEEEEEchhh-----ccCHHHHHHHHHHHHHHHhCCC---------------
Confidence            57999999999999999999      899999998642     1123345778999999999998               


Q ss_pred             ccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc---cCCHHHHHHHHHHHHHHHHH
Q psy9184         335 LKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK---YRSPNQTYAMILQVVFSLAV  411 (562)
Q Consensus       335 ~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~---~l~e~~i~~I~~QIl~aL~y  411 (562)
                                 |||++++++|.+             ++.+|+|||||+||++.+.+.   .+++.+++.++.||+.||.|
T Consensus        65 -----------p~Iv~l~~~~~~-------------~~~~~iv~ey~~gg~L~~~~~~~~~~~e~~~~~~~~qil~al~y  120 (337)
T d1o6la_          65 -----------PFLTALKYAFQT-------------HDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEY  120 (337)
T ss_dssp             -----------TTBCCEEEEEEC-------------SSEEEEEEECCTTCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHH
T ss_pred             -----------CCEEEEEeeecc-------------ccccccceeccCCCchhhhhhcccCCcHHHHHHHHHHHhhhhhh
Confidence                       999999999986             568999999999998877664   48999999999999999999


Q ss_pred             HHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecC-----CcEEEeecCCCccccCC
Q psy9184         412 AEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVG-----EKICYYDLSQDEELFEG  486 (562)
Q Consensus       412 LH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~-----~g~v~~~l~~~pelF~g  486 (562)
                      ||+ +||+||||||+|||++.++                    .+||+|||+|+....     ...+++..|++||++.+
T Consensus       121 lH~-~~iiHRDlKP~NILl~~~g--------------------~vkl~DFG~a~~~~~~~~~~~~~~GT~~Y~aPE~~~~  179 (337)
T d1o6la_         121 LHS-RDVVYRDIKLENLMLDKDG--------------------HIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLED  179 (337)
T ss_dssp             HHH-TTCBCCCCCGGGEEECTTS--------------------CEEECCCTTCBCSCCTTCCBCCCEECGGGCCGGGGSS
T ss_pred             hhh-cCccccccCHHHeEecCCC--------------------CEEEeecccccccccCCcccccceeCHHHhhhhhccC
Confidence            999 7999999999999999887                    799999999997643     34678999999999988


Q ss_pred             C-CCcHHHHHHHhhcccCCCCCCCCCCChhhhHHHHHHHHhhcccCCCCCCCchhHHHHHHHHHHHhcCCCcCcCCC
Q psy9184         487 E-GDYQFDMYRMMRKQCQNNWQNFTPKNNVFWIHYLVDKATCLKKGYQYLRAPRHQAFELLEELGQNALHFDSCYEM  562 (562)
Q Consensus       487 ~-~~~q~dIy~lm~~~~~~~W~~~~P~tn~~wl~yl~~~Ll~~~~~~~~~~~~~~~~~~~l~~l~~~~l~~~s~~~~  562 (562)
                      . ++..+|||++.-... .+..+..|+...-. .-+..........++..-      -..++.|++++|+.+...|+
T Consensus       180 ~~y~~~~DiwSlGvily-eml~G~~pf~~~~~-~~~~~~i~~~~~~~p~~~------s~~~~dli~~~L~~dP~~R~  248 (337)
T d1o6la_         180 NDYGRAVDWWGLGVVMY-EMMCGRLPFYNQDH-ERLFELILMEEIRFPRTL------SPEAKSLLAGLLKKDPKQRL  248 (337)
T ss_dssp             SCBCTTHHHHHHHHHHH-HHHHSSCSSCCSSH-HHHHHHHHHCCCCCCTTS------CHHHHHHHHHHTCSSTTTST
T ss_pred             CCCChhhcccchhhHHH-HHHHCCCCCCCcCH-HHHHHHHhcCCCCCCccC------CHHHHHHHHhhccCCchhhc
Confidence            4 566799988544333 33344455533221 222333343233443322      23567788899988877764

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.3e-35  Score=302.11  Aligned_cols=174  Identities=22%  Similarity=0.282  Sum_probs=148.7

Q ss_pred             CCCCceeeeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCcccc
Q psy9184         260 SSALKNCKKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTE  333 (562)
Q Consensus       260 ~~~y~~~~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~  333 (562)
                      .++|+++++||+|+||.||+|      +.||+|+++...       .......+.+|+.+|+.++|              
T Consensus         5 ~d~y~~~~~iG~G~fg~V~~~~~~~~~~~vAiK~i~~~~-------~~~~~~~~~~Ei~il~~l~H--------------   63 (322)
T d1s9ja_           5 DDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEI-------KPAIRNQIIRELQVLHECNS--------------   63 (322)
T ss_dssp             GGGEEEEEEEECCSSCCEEEEEETTTTEEEEEEEEECCC-------CTTHHHHHHHHGGGGGGCCC--------------
T ss_pred             ccCCEEEEEEecCCCeEEEEEEECCCCcEEEEEEEChhh-------CHHHHHHHHHHHHHHHhCCC--------------
Confidence            467999999999999999999      899999998653       12334678899999999998              


Q ss_pred             cccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc---cCCHHHHHHHHHHHHHHHH
Q psy9184         334 LLKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK---YRSPNQTYAMILQVVFSLA  410 (562)
Q Consensus       334 l~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~---~l~e~~i~~I~~QIl~aL~  410 (562)
                                  ||||+++++|.+             ++.+|+|||||+||++.+.+.   .+++..++.++.||+.||.
T Consensus        64 ------------pnIv~l~~~~~~-------------~~~~~iVmEy~~gg~L~~~l~~~~~l~~~~~~~~~~qil~aL~  118 (322)
T d1s9ja_          64 ------------PYIVGFYGAFYS-------------DGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLT  118 (322)
T ss_dssp             ------------TTBCCEEEEEEC-------------SSEEEEEEECCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHH
T ss_pred             ------------CCCCcEEEEEEE-------------CCEEEEEEEcCCCCcHHHHHhhcCCCCHHHHHHHHHHHHHHHH
Confidence                        999999999986             568999999999998766664   4999999999999999999


Q ss_pred             HHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecC---CcEEEeecCCCccccCC-
Q psy9184         411 VAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVG---EKICYYDLSQDEELFEG-  486 (562)
Q Consensus       411 yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~---~g~v~~~l~~~pelF~g-  486 (562)
                      |||+++||+||||||+|||++.++                    .+||+|||+|+....   ...+++..|++||++.+ 
T Consensus       119 yLH~~~~IiHRDiKP~NILl~~~~--------------------~vkl~DFGla~~~~~~~~~~~~GT~~Y~APEvl~~~  178 (322)
T d1s9ja_         119 YLREKHKIMHRDVKPSNILVNSRG--------------------EIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGT  178 (322)
T ss_dssp             HHHHHHCCCCSCCSGGGEEECTTC--------------------CEEECCCCCCHHHHHHTC---CCSSCCCCHHHHHCS
T ss_pred             HHHHhCCEEccccCHHHeeECCCC--------------------CEEEeeCCCccccCCCccccccCCccccCchHHcCC
Confidence            999745999999999999999886                    799999999997643   45567899999999988 


Q ss_pred             CCCcHHHHHHHhh
Q psy9184         487 EGDYQFDMYRMMR  499 (562)
Q Consensus       487 ~~~~q~dIy~lm~  499 (562)
                      .++...|||++.-
T Consensus       179 ~y~~~~DiWSlGv  191 (322)
T d1s9ja_         179 HYSVQSDIWSMGL  191 (322)
T ss_dssp             CCCTTHHHHHHHH
T ss_pred             CCCcHHHHHHHHH
Confidence            4677799988643

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

Probab=100.00  E-value=9.8e-35  Score=302.69  Aligned_cols=231  Identities=16%  Similarity=0.146  Sum_probs=176.5

Q ss_pred             CCCceeeeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCccccc
Q psy9184         261 SALKNCKKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTEL  334 (562)
Q Consensus       261 ~~y~~~~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~l  334 (562)
                      ++|++++.||+|+||.||+|      +.||||++....        ......+.+|+.+|+.|+|               
T Consensus        29 d~Y~i~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~--------~~~~~~~~~Ei~il~~l~H---------------   85 (352)
T d1koba_          29 DYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPY--------PLDKYTVKNEISIMNQLHH---------------   85 (352)
T ss_dssp             GTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCS--------HHHHHHHHHHHHHHTTCCS---------------
T ss_pred             cceEEEEEEecCCCeEEEEEEECCCCCEEEEEEECCcc--------hhHHHHHHHHHHHHHhCCC---------------
Confidence            57999999999999999999      799999998653        2234577899999999998               


Q ss_pred             ccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc----cCCHHHHHHHHHHHHHHHH
Q psy9184         335 LKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK----YRSPNQTYAMILQVVFSLA  410 (562)
Q Consensus       335 ~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~----~l~e~~i~~I~~QIl~aL~  410 (562)
                                 ||||+++++|.+             ++.+|||||||+||++.+.+.    .+++.+++.|+.||+.||.
T Consensus        86 -----------pnIv~~~~~~~~-------------~~~~~ivmE~~~gg~L~~~~~~~~~~l~e~~~~~i~~qi~~aL~  141 (352)
T d1koba_          86 -----------PKLINLHDAFED-------------KYEMVLILEFLSGGELFDRIAAEDYKMSEAEVINYMRQACEGLK  141 (352)
T ss_dssp             -----------TTBCCEEEEEEC-------------SSEEEEEEECCCCCBHHHHTTCTTCCBCHHHHHHHHHHHHHHHH
T ss_pred             -----------CCCCcEEEEEEE-------------CCEEEEEEEcCCCChHHHHHHhcCCCCCHHHHHHHHHHHHHHHH
Confidence                       999999999986             568999999999998877654    3899999999999999999


Q ss_pred             HHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecCC----cEEEeecCCCccccCC
Q psy9184         411 VAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVGE----KICYYDLSQDEELFEG  486 (562)
Q Consensus       411 yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~~----g~v~~~l~~~pelF~g  486 (562)
                      |||+ +||+||||||+|||++....                  ..+||+|||+|+.....    ...++..|++||++.+
T Consensus       142 ylH~-~~iiHRDiKp~NILl~~~~~------------------~~vkL~DFGla~~~~~~~~~~~~~gt~~y~aPE~~~~  202 (352)
T d1koba_         142 HMHE-HSIVHLDIKPENIMCETKKA------------------SSVKIIDFGLATKLNPDEIVKVTTATAEFAAPEIVDR  202 (352)
T ss_dssp             HHHH-TTEECCCCCGGGEEESSTTC------------------CCEEECCCTTCEECCTTSCEEEECSSGGGCCHHHHTT
T ss_pred             HHHH-CCeeecccccccccccccCC------------------CeEEEeecccceecCCCCceeeccCcccccCHHHHcC
Confidence            9999 79999999999999985421                  17999999999987653    3455788999999988


Q ss_pred             C-CCcHHHHHHHhhcccCCCCCCCCCCChhhhHHHHHHHHhhcccCCCCCCCchhHHHHHHHHHHHhcCCCcCcCC
Q psy9184         487 E-GDYQFDMYRMMRKQCQNNWQNFTPKNNVFWIHYLVDKATCLKKGYQYLRAPRHQAFELLEELGQNALHFDSCYE  561 (562)
Q Consensus       487 ~-~~~q~dIy~lm~~~~~~~W~~~~P~tn~~wl~yl~~~Ll~~~~~~~~~~~~~~~~~~~l~~l~~~~l~~~s~~~  561 (562)
                      . .+...|||++.-. +.....+..|+........ ..........++...  ....-..+.+|..+||+++...|
T Consensus       203 ~~~~~~~DiwSlGvi-lyelltG~~Pf~~~~~~~~-~~~i~~~~~~~~~~~--~~~~s~~~~~li~~~L~~dp~~R  274 (352)
T d1koba_         203 EPVGFYTDMWAIGVL-GYVLLSGLSPFAGEDDLET-LQNVKRCDWEFDEDA--FSSVSPEAKDFIKNLLQKEPRKR  274 (352)
T ss_dssp             CCBCHHHHHHHHHHH-HHHHHHSCCSSCCSSHHHH-HHHHHHCCCCCCSST--TTTSCHHHHHHHHTTSCSSGGGS
T ss_pred             CCCCCccchHHHHHH-HHHHHhCCCCCCCCCHHHH-HHHHHhCCCCCCccc--ccCCCHHHHHHHHHHccCChhHC
Confidence            5 5677999885443 3344556666654332222 233333122222211  11223467888999999987765

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.5e-35  Score=295.94  Aligned_cols=230  Identities=16%  Similarity=0.203  Sum_probs=166.8

Q ss_pred             CCCceeeeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCccccc
Q psy9184         261 SALKNCKKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTEL  334 (562)
Q Consensus       261 ~~y~~~~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~l  334 (562)
                      ++|++.+.||+|+||+||+|      +.||+|++....      ..+...+.+.+|+.++++++|               
T Consensus         4 edy~~~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~------~~~~~~~~~~~E~~il~~l~H---------------   62 (269)
T d2java1           4 EDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGS------MTEAEKQMLVSEVNLLRELKH---------------   62 (269)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCTT------SCHHHHHHHHHHHHHTTSCCC---------------
T ss_pred             hhCEEeEEEecCCCeEEEEEEECCCCCEEEEEEEChhh------CCHHHHHHHHHHHHHHHHCCC---------------
Confidence            67999999999999999999      789999998753      123445778999999999998               


Q ss_pred             ccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc-------cCCHHHHHHHHHHHHH
Q psy9184         335 LKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK-------YRSPNQTYAMILQVVF  407 (562)
Q Consensus       335 ~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~-------~l~e~~i~~I~~QIl~  407 (562)
                                 |||++++++|.+..           ++.+|+|||||+||++.+.+.       .+++.+++.++.||+.
T Consensus        63 -----------pnIv~~~~~~~~~~-----------~~~~~ivmEy~~~g~L~~~i~~~~~~~~~l~e~~~~~i~~qi~~  120 (269)
T d2java1          63 -----------PNIVRYYDRIIDRT-----------NTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTL  120 (269)
T ss_dssp             -----------TTBCCEEEEEEC---------------CEEEEEECCTTEEHHHHHHHHHHHTCCCCHHHHHHHHHHHHH
T ss_pred             -----------CCEeeEEEEEEeCC-----------CCEEEEEEecCCCCcHHHHHHhccccCCCCCHHHHHHHHHHHHH
Confidence                       99999999886522           457999999999998877653       3899999999999999


Q ss_pred             HHHHHHhhCC-----eEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecC-----CcEEEeec
Q psy9184         408 SLAVAEVELE-----FEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVG-----EKICYYDL  477 (562)
Q Consensus       408 aL~yLH~~~~-----IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~-----~g~v~~~l  477 (562)
                      ||.|||+. +     |+||||||+|||++.++                    .+||+|||+|+....     .+..++..
T Consensus       121 al~ylH~~-~~~~~~IiHrDiKp~NIll~~~~--------------------~vkl~DFG~a~~~~~~~~~~~~~~gt~~  179 (269)
T d2java1         121 ALKECHRR-SDGGHTVLHRDLKPANVFLDGKQ--------------------NVKLGDFGLARILNHDTSFAKAFVGTPY  179 (269)
T ss_dssp             HHHHHHHH-CC---------CCGGGEEECTTS--------------------CEEECCHHHHHHC-----------CCCS
T ss_pred             HHHHHHHh-cCCCCCEEeCcCchhhcCcCCCC--------------------cEEEeeccceeecccCCCccccCCCCcc
Confidence            99999994 5     99999999999999886                    799999999987653     34566889


Q ss_pred             CCCccccCCC-CCcHHHHHHHhhcccCCCCCCCCCCChhhhHHHHHHHHhhcccCCCCCCCchhHHHHHHHHHHHhcCCC
Q psy9184         478 SQDEELFEGE-GDYQFDMYRMMRKQCQNNWQNFTPKNNVFWIHYLVDKATCLKKGYQYLRAPRHQAFELLEELGQNALHF  556 (562)
Q Consensus       478 ~~~pelF~g~-~~~q~dIy~lm~~~~~~~W~~~~P~tn~~wl~yl~~~Ll~~~~~~~~~~~~~~~~~~~l~~l~~~~l~~  556 (562)
                      |++||++.+. .+.++|||++.- .......+..|+....+. -+..+... + .++.....   .-..+.+|.+++|+.
T Consensus       180 Y~APE~l~~~~~~~~~DIwSlGv-ilyel~tg~~Pf~~~~~~-~~~~~i~~-~-~~~~~~~~---~s~~l~~li~~~L~~  252 (269)
T d2java1         180 YMSPEQMNRMSYNEKSDIWSLGC-LLYELCALMPPFTAFSQK-ELAGKIRE-G-KFRRIPYR---YSDELNEIITRMLNL  252 (269)
T ss_dssp             CCCHHHHTTCCCCHHHHHHHHHH-HHHHHHHSSCSCCCSSHH-HHHHHHHH-T-CCCCCCTT---SCHHHHHHHHHHTCS
T ss_pred             cCCHHHHcCCCCChHHHHHhhCH-HHHHHhhCCCCCCCCCHH-HHHHHHHc-C-CCCCCCcc---cCHHHHHHHHHHcCC
Confidence            9999999774 567799988643 333444455565433322 22333343 1 22222111   234678889999998


Q ss_pred             cCcCC
Q psy9184         557 DSCYE  561 (562)
Q Consensus       557 ~s~~~  561 (562)
                      +...|
T Consensus       253 dp~~R  257 (269)
T d2java1         253 KDYHR  257 (269)
T ss_dssp             SGGGS
T ss_pred             ChhHC
Confidence            87765

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

Probab=100.00  E-value=1.4e-34  Score=301.34  Aligned_cols=231  Identities=17%  Similarity=0.183  Sum_probs=175.5

Q ss_pred             CCCceeeeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCccccc
Q psy9184         261 SALKNCKKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTEL  334 (562)
Q Consensus       261 ~~y~~~~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~l  334 (562)
                      ++|++++.||+|+||.||+|      +.||||++....        ....+.+.+|+.+|+.|+|               
T Consensus        26 ~~Y~i~~~lG~G~fg~Vy~~~~~~~g~~vAvK~i~~~~--------~~~~~~~~~E~~il~~l~H---------------   82 (350)
T d1koaa2          26 DHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPH--------ESDKETVRKEIQTMSVLRH---------------   82 (350)
T ss_dssp             GTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECCCS--------HHHHHHHHHHHHHHHHTCC---------------
T ss_pred             cCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEcccc--------hhhHHHHHHHHHHHHhCCC---------------
Confidence            57999999999999999999      799999997653        2334678899999999998               


Q ss_pred             ccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc----cCCHHHHHHHHHHHHHHHH
Q psy9184         335 LKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK----YRSPNQTYAMILQVVFSLA  410 (562)
Q Consensus       335 ~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~----~l~e~~i~~I~~QIl~aL~  410 (562)
                                 ||||+++++|.+             ++.+|||||||+||++.+.+.    .+++.+++.|+.||+.||.
T Consensus        83 -----------pnIv~~~~~~~~-------------~~~~~ivmE~~~gg~L~~~l~~~~~~l~e~~~~~i~~qi~~aL~  138 (350)
T d1koaa2          83 -----------PTLVNLHDAFED-------------DNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLC  138 (350)
T ss_dssp             -----------TTBCCEEEEEEE-------------TTEEEEEECCCCSCBHHHHHTCTTSCBCHHHHHHHHHHHHHHHH
T ss_pred             -----------CCCCcEEEEEEE-------------CCEEEEEEEcCCCCCHHHHHHhhcCCCCHHHHHHHHHHHHHHHH
Confidence                       999999999986             568999999999998877663    3899999999999999999


Q ss_pred             HHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecCC----cEEEeecCCCccccCC
Q psy9184         411 VAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVGE----KICYYDLSQDEELFEG  486 (562)
Q Consensus       411 yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~~----g~v~~~l~~~pelF~g  486 (562)
                      |||+ +||+||||||+|||+..+..                  ..+||+|||+|+.....    ...++..|++||++.+
T Consensus       139 ylH~-~~iiHrDiKp~NIll~~~~~------------------~~vkL~DFG~a~~~~~~~~~~~~~gT~~Y~aPEv~~~  199 (350)
T d1koaa2         139 HMHE-NNYVHLDLKPENIMFTTKRS------------------NELKLIDFGLTAHLDPKQSVKVTTGTAEFAAPEVAEG  199 (350)
T ss_dssp             HHHH-TTEECCCCCGGGEEESSTTS------------------CCEEECCCTTCEECCTTSCEEEECSCTTTCCHHHHHT
T ss_pred             HHHh-cCCeeeeechhHeeeccCCC------------------CeEEEeecchheecccccccceecCcccccCHHHHcC
Confidence            9999 79999999999999975431                  17999999999987652    3455889999999988


Q ss_pred             C-CCcHHHHHHHhhcccCCCCCCCCCCChhhhHHHHHHHHhhcccCCCCCCCchhHHHHHHHHHHHhcCCCcCcCC
Q psy9184         487 E-GDYQFDMYRMMRKQCQNNWQNFTPKNNVFWIHYLVDKATCLKKGYQYLRAPRHQAFELLEELGQNALHFDSCYE  561 (562)
Q Consensus       487 ~-~~~q~dIy~lm~~~~~~~W~~~~P~tn~~wl~yl~~~Ll~~~~~~~~~~~~~~~~~~~l~~l~~~~l~~~s~~~  561 (562)
                      . ++..+|||++.- .+..+..+..|+...- ..-+......  ..+..+.......-+.+..|..+||+++...|
T Consensus       200 ~~~~~~~DiwSlGv-ilyell~G~~Pf~~~~-~~~~~~~i~~--~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R  271 (350)
T d1koaa2         200 KPVGYYTDMWSVGV-LSYILLSGLSPFGGEN-DDETLRNVKS--CDWNMDDSAFSGISEDGKDFIRKLLLADPNTR  271 (350)
T ss_dssp             CCBCHHHHHHHHHH-HHHHHHHSSCSSCCSS-HHHHHHHHHH--TCCCSCCGGGGGCCHHHHHHHHHHCCSSGGGS
T ss_pred             CCCChhHhhhhhhH-HHHHHHhCCCCCCCCC-HHHHHHHHHh--CCCCCCcccccCCCHHHHHHHHHHccCChhHC
Confidence            5 566799988644 3334445555653221 1112222332  12222221111223567888999999988766

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=5.6e-35  Score=298.94  Aligned_cols=233  Identities=17%  Similarity=0.184  Sum_probs=163.9

Q ss_pred             CCCceeeeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCccccc
Q psy9184         261 SALKNCKKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTEL  334 (562)
Q Consensus       261 ~~y~~~~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~l  334 (562)
                      +.|++.+.||+|+||+||+|      +.||||++.....       ......+.+|+.+|+.++|               
T Consensus         9 d~Y~~~~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~-------~~~~~~~~~Ei~il~~l~H---------------   66 (307)
T d1a06a_           9 DIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKAL-------EGKEGSMENEIAVLHKIKH---------------   66 (307)
T ss_dssp             GTEEEEEESBSGGGGGEEEEEETTTCCEEEEEEEEC-----------------CHHHHHHHTCCC---------------
T ss_pred             cceEEEEEEeeccCeEEEEEEECCCCCEEEEEEEchHHh-------hhHHHHHHHHHHHHHhCCC---------------
Confidence            56899999999999999999      7899999987541       1223567899999999998               


Q ss_pred             ccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc---cCCHHHHHHHHHHHHHHHHH
Q psy9184         335 LKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK---YRSPNQTYAMILQVVFSLAV  411 (562)
Q Consensus       335 ~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~---~l~e~~i~~I~~QIl~aL~y  411 (562)
                                 |||++++++|.+             ++.+|||||||+||++.+.+.   .+++.++..++.||+.||.|
T Consensus        67 -----------pnIv~l~~~~~~-------------~~~~~lvmE~~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~al~y  122 (307)
T d1a06a_          67 -----------PNIVALDDIYES-------------GGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKY  122 (307)
T ss_dssp             -----------TTBCCEEEEEEC-------------SSEEEEEECCCCSCBHHHHHHTCSCCCHHHHHHHHHHHHHHHHH
T ss_pred             -----------CCCCcEEEEEEE-------------CCEEEEEEeccCCCcHHHhhhcccCCCHHHHHHHHHHHHHHHHh
Confidence                       999999999986             568999999999998877764   49999999999999999999


Q ss_pred             HHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecC----CcEEEeecCCCccccCCC
Q psy9184         412 AEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVG----EKICYYDLSQDEELFEGE  487 (562)
Q Consensus       412 LH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~----~g~v~~~l~~~pelF~g~  487 (562)
                      ||+ .||+||||||+|||+...+..                 ..+||+|||+|+....    ...+++..|++||++.+.
T Consensus       123 lH~-~~iiHrDiKp~Nil~~~~~~~-----------------~~vkl~DFG~a~~~~~~~~~~~~~GT~~y~APE~~~~~  184 (307)
T d1a06a_         123 LHD-LGIVHRDLKPENLLYYSLDED-----------------SKIMISDFGLSKMEDPGSVLSTACGTPGYVAPEVLAQK  184 (307)
T ss_dssp             HHH-TTCCCSCCCGGGEEESSSSTT-----------------CCEEECCC------------------CTTSCHHHHTTC
T ss_pred             hhh-ceeeeEEecccceeecccCCC-----------------ceEEEeccceeEEccCCCeeeeeeeCccccCcHHHcCC
Confidence            999 799999999999999753211                 1799999999987654    345678999999999884


Q ss_pred             -CCcHHHHHHHhhcccCCCCCCCCCCChhhhHHHHHHHHhhcccCCCCCCCchhHHHHHHHHHHHhcCCCcCcCC
Q psy9184         488 -GDYQFDMYRMMRKQCQNNWQNFTPKNNVFWIHYLVDKATCLKKGYQYLRAPRHQAFELLEELGQNALHFDSCYE  561 (562)
Q Consensus       488 -~~~q~dIy~lm~~~~~~~W~~~~P~tn~~wl~yl~~~Ll~~~~~~~~~~~~~~~~~~~l~~l~~~~l~~~s~~~  561 (562)
                       ++..+|||++.-.. .....+..|+.+..... +....+.....++.+..  ...-..+.+|..+||..+...|
T Consensus       185 ~~~~~~DiwSlGvil-yell~g~~Pf~~~~~~~-~~~~i~~~~~~~~~~~~--~~~s~~~~~li~~~L~~dP~~R  255 (307)
T d1a06a_         185 PYSKAVDCWSIGVIA-YILLCGYPPFYDENDAK-LFEQILKAEYEFDSPYW--DDISDSAKDFIRHLMEKDPEKR  255 (307)
T ss_dssp             CCCTHHHHHHHHHHH-HHHHHSSCSCCCSSHHH-HHHHHHTTCCCCCTTTT--TTSCHHHHHHHHHHSCSSGGGS
T ss_pred             CCCcHHHhhhhhHHH-HHHHhCCCCCCCCCHHH-HHHHHhccCCCCCCccc--cCCCHHHHHHHHHHccCCHhHC
Confidence             57789998864443 34455666665443222 23333431333332221  1123467788899999887765

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=100.00  E-value=1.3e-34  Score=297.42  Aligned_cols=228  Identities=16%  Similarity=0.197  Sum_probs=175.9

Q ss_pred             CCCceeeeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCccccc
Q psy9184         261 SALKNCKKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTEL  334 (562)
Q Consensus       261 ~~y~~~~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~l  334 (562)
                      ++|++++.||+|+||+||+|      +.||||+++...     .......+.+.+|+.+++.++|               
T Consensus         4 ~dy~i~~~lG~G~fg~Vy~a~~~~~g~~vAvK~i~~~~-----~~~~~~~~~~~~E~~il~~l~H---------------   63 (316)
T d1fota_           4 QDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEI-----VVRLKQVEHTNDERLMLSIVTH---------------   63 (316)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHH-----HHHTTCHHHHHHHHHHHHSCCB---------------
T ss_pred             hHeEEEEEEecCcCcEEEEEEECCCCCEEEEEEEchHH-----ccCHHHHHHHHHHHHHHHhccC---------------
Confidence            56999999999999999999      789999998642     1223445788999999999998               


Q ss_pred             ccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc---cCCHHHHHHHHHHHHHHHHH
Q psy9184         335 LKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK---YRSPNQTYAMILQVVFSLAV  411 (562)
Q Consensus       335 ~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~---~l~e~~i~~I~~QIl~aL~y  411 (562)
                                 |||++++++|.+             ++.+|+|||||.||++...+.   .+++..++.++.||+.||+|
T Consensus        64 -----------pnIv~~~~~~~~-------------~~~~~ivmE~~~gg~l~~~~~~~~~~~~~~~~~~~~qi~~al~~  119 (316)
T d1fota_          64 -----------PFIIRMWGTFQD-------------AQQIFMIMDYIEGGELFSLLRKSQRFPNPVAKFYAAEVCLALEY  119 (316)
T ss_dssp             -----------TTBCCEEEEEEC-------------SSEEEEEECCCCSCBHHHHHHHTSSCCHHHHHHHHHHHHHHHHH
T ss_pred             -----------cChhheeeeEee-------------CCeeeeEeeecCCccccccccccccccccHHHHHHHHHHHhhhh
Confidence                       999999999986             569999999999997665553   48899999999999999999


Q ss_pred             HHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecC--CcEEEeecCCCccccCCC-C
Q psy9184         412 AEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVG--EKICYYDLSQDEELFEGE-G  488 (562)
Q Consensus       412 LH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~--~g~v~~~l~~~pelF~g~-~  488 (562)
                      ||+ .||+||||||+|||++.++                    .+||+|||+|+....  ...+++..|++||++.+. +
T Consensus       120 lH~-~~iiHrDiKp~NILl~~~g--------------------~vkL~DFG~a~~~~~~~~~~~Gt~~Y~APE~l~~~~y  178 (316)
T d1fota_         120 LHS-KDIIYRDLKPENILLDKNG--------------------HIKITDFGFAKYVPDVTYTLCGTPDYIAPEVVSTKPY  178 (316)
T ss_dssp             HHT-TTEECCCCCGGGEEECTTS--------------------CEEECCCSSCEECSSCBCCCCSCTTTCCHHHHTTCCB
T ss_pred             hcc-CcEEccccCchheeEcCCC--------------------CEEEecCccceEeccccccccCcccccCHHHHcCCCC
Confidence            999 7999999999999999887                    799999999998765  345678899999999885 5


Q ss_pred             CcHHHHHHHhhcccCCCCCCCCCCChhhhHHHHHHHHhhcccCCCCCCCchhHHHHHHHHHHHhcCCCcCcCC
Q psy9184         489 DYQFDMYRMMRKQCQNNWQNFTPKNNVFWIHYLVDKATCLKKGYQYLRAPRHQAFELLEELGQNALHFDSCYE  561 (562)
Q Consensus       489 ~~q~dIy~lm~~~~~~~W~~~~P~tn~~wl~yl~~~Ll~~~~~~~~~~~~~~~~~~~l~~l~~~~l~~~s~~~  561 (562)
                      +..+|||++.-. +..+..+..|+...- ..-+..+.+.....++..-      -..+..|.+++|..+...|
T Consensus       179 ~~~~DiwSlGvi-lyemltG~~Pf~~~~-~~~~~~~i~~~~~~~p~~~------s~~~~~li~~~L~~dp~~R  243 (316)
T d1fota_         179 NKSIDWWSFGIL-IYEMLAGYTPFYDSN-TMKTYEKILNAELRFPPFF------NEDVKDLLSRLITRDLSQR  243 (316)
T ss_dssp             CTTHHHHHHHHH-HHHHHHSSCTTCCSS-HHHHHHHHHHCCCCCCTTS------CHHHHHHHHHHTCSCTTTC
T ss_pred             Cchhhccccchh-HHHHHhCCCCCCCcC-HHHHHHHHHcCCCCCCCCC------CHHHHHHHHHHhhhCHHhc
Confidence            777999885443 334445556664332 1222333444123333221      2356777888888776655

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=1.9e-34  Score=300.14  Aligned_cols=228  Identities=18%  Similarity=0.228  Sum_probs=178.2

Q ss_pred             CCCceeeeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCccccc
Q psy9184         261 SALKNCKKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTEL  334 (562)
Q Consensus       261 ~~y~~~~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~l  334 (562)
                      ++|++++.||+|+||.||+|      +.||||++....     .......+.+.+|+.+|+.++|               
T Consensus        41 d~y~i~~~lG~G~fg~Vy~a~~~~~g~~~AvK~i~~~~-----~~~~~~~~~~~~E~~il~~l~h---------------  100 (350)
T d1rdqe_          41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQK-----VVKLKQIEHTLNEKRILQAVNF---------------  100 (350)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHH-----HHHTTCHHHHHHHHHHHTTCCC---------------
T ss_pred             cCeEEEEEeecCcCcEEEEEEECCCCCEEEEEEEchHH-----ccCHHHHHHHHHHHHHHHHcCC---------------
Confidence            67999999999999999999      789999998542     2233445778999999999998               


Q ss_pred             ccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc---cCCHHHHHHHHHHHHHHHHH
Q psy9184         335 LKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK---YRSPNQTYAMILQVVFSLAV  411 (562)
Q Consensus       335 ~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~---~l~e~~i~~I~~QIl~aL~y  411 (562)
                                 |||++++++|.+             ...+|+||||+.||++...+.   .+++.+++.++.||+.||.|
T Consensus       101 -----------pnIv~~~~~~~~-------------~~~~~~v~e~~~~g~l~~~l~~~~~l~e~~~~~i~~qi~~aL~y  156 (350)
T d1rdqe_         101 -----------PFLVKLEFSFKD-------------NSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEY  156 (350)
T ss_dssp             -----------TTBCCEEEEEEC-------------SSEEEEEEECCTTCBHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
T ss_pred             -----------CcEeeccccccc-------------ccccccccccccccchhhhHhhcCCCCHHHHHHHHHHHHHHHHH
Confidence                       999999999986             568999999999998877664   49999999999999999999


Q ss_pred             HHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecC--CcEEEeecCCCccccCCC-C
Q psy9184         412 AEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVG--EKICYYDLSQDEELFEGE-G  488 (562)
Q Consensus       412 LH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~--~g~v~~~l~~~pelF~g~-~  488 (562)
                      ||+ +|||||||||+|||++.++                    .+||+|||+|+....  ....++..|++||++.+. +
T Consensus       157 LH~-~~iiHRDIKP~NILl~~~g--------------------~ikL~DFG~a~~~~~~~~~~~Gt~~Y~APE~~~~~~~  215 (350)
T d1rdqe_         157 LHS-LDLIYRDLKPENLLIDQQG--------------------YIQVTDFGFAKRVKGRTWTLCGTPEALAPEIILSKGY  215 (350)
T ss_dssp             HHH-TTEECCCCSGGGEEECTTS--------------------CEEECCCTTCEECSSCBCCCEECGGGCCHHHHTTCCB
T ss_pred             HHh-CCEecCcCCHHHcccCCCC--------------------CEEeeeceeeeecccccccccCccccCCHHHHcCCCC
Confidence            999 7999999999999999886                    799999999998765  456788999999999885 5


Q ss_pred             CcHHHHHHHhhcccCCCCCCCCCCChhhhHHHHHHHHhhcccCCCCCCCchhHHHHHHHHHHHhcCCCcCcCC
Q psy9184         489 DYQFDMYRMMRKQCQNNWQNFTPKNNVFWIHYLVDKATCLKKGYQYLRAPRHQAFELLEELGQNALHFDSCYE  561 (562)
Q Consensus       489 ~~q~dIy~lm~~~~~~~W~~~~P~tn~~wl~yl~~~Ll~~~~~~~~~~~~~~~~~~~l~~l~~~~l~~~s~~~  561 (562)
                      +...|||++. ..+..+..+..|+...--. .+..+.......++..-      -..+..|.+.||..+...|
T Consensus       216 ~~~~DiwSlG-vilyemltG~~Pf~~~~~~-~~~~~i~~~~~~~p~~~------s~~~~~li~~~L~~dP~kR  280 (350)
T d1rdqe_         216 NKAVDWWALG-VLIYEMAAGYPPFFADQPI-QIYEKIVSGKVRFPSHF------SSDLKDLLRNLLQVDLTKR  280 (350)
T ss_dssp             CTHHHHHHHH-HHHHHHHHSSCSSCCSSHH-HHHHHHHHCCCCCCTTC------CHHHHHHHHHHSCSCTTTC
T ss_pred             Cccccccchh-HHHHHHHhCCCCCCCcCHH-HHHHHHhcCCCCCCccC------CHHHHHHHHHHhhhCHHhc
Confidence            6679998754 4444555566666433212 22333333122232211      2367778888888887665

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=6e-35  Score=294.27  Aligned_cols=174  Identities=18%  Similarity=0.243  Sum_probs=143.9

Q ss_pred             CCCCCCceeeeeeccCceEEEEE---eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCccccc
Q psy9184         258 YPSSALKNCKKIGEGVYGEVFKL---NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTEL  334 (562)
Q Consensus       258 ~~~~~y~~~~~LG~GsfG~Vyka---~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~l  334 (562)
                      ++.++|++.++||+|+||+||+|   ..||||+++....      .....+.+.+|+.+|++++|               
T Consensus         5 i~~~~~~~~~~lG~G~fg~Vy~~~~~~~vAvK~~~~~~~------~~~~~~~~~~E~~~l~~l~H---------------   63 (276)
T d1uwha_           5 IPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAP------TPQQLQAFKNEVGVLRKTRH---------------   63 (276)
T ss_dssp             CCTTCCCCCSEEEECSSCEEEEEESSSEEEEEECCCSSC------CTTHHHHHHHHHHHHTTCCC---------------
T ss_pred             cccccEEEEEEEeeCCCcEEEEEEECCEEEEEEEEcccC------CHHHHHHHHHHHHHHHhCCC---------------
Confidence            45688999999999999999999   7899999986531      23445788999999999998               


Q ss_pred             ccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc----cCCHHHHHHHHHHHHHHHH
Q psy9184         335 LKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK----YRSPNQTYAMILQVVFSLA  410 (562)
Q Consensus       335 ~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~----~l~e~~i~~I~~QIl~aL~  410 (562)
                                 ||||+++++..              ++.+|+|||||+||++.+.+.    .+++.++..++.||+.||+
T Consensus        64 -----------pnIv~~~~~~~--------------~~~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~gl~  118 (276)
T d1uwha_          64 -----------VNILLFMGYST--------------APQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMD  118 (276)
T ss_dssp             -----------TTBCCEEEEEC--------------SSSCEEEEECCCEEEHHHHHHTSCCCCCHHHHHHHHHHHHHHHH
T ss_pred             -----------CCEeeeeEEEe--------------ccEEEEEEecCCCCCHHHHHhhccCCCCHHHHHHHHHHHHHHHH
Confidence                       99999998754              346899999999998877663    3899999999999999999


Q ss_pred             HHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecC-------CcEEEeecCCCccc
Q psy9184         411 VAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVG-------EKICYYDLSQDEEL  483 (562)
Q Consensus       411 yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~-------~g~v~~~l~~~pel  483 (562)
                      |||+ .+||||||||+|||++.++                    .+||+|||+|+....       ....++..|++||+
T Consensus       119 yLH~-~~ivHrDlKp~NiLl~~~~--------------------~~Kl~DFGla~~~~~~~~~~~~~~~~gt~~y~APE~  177 (276)
T d1uwha_         119 YLHA-KSIIHRDLKSNNIFLHEDL--------------------TVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEV  177 (276)
T ss_dssp             HHHH-TTCCCSCCCGGGEEEETTS--------------------SEEECCCCCSCC------------CCCCGGGCCHHH
T ss_pred             HHhc-CCEeccccCHHHEEEcCCC--------------------CEEEccccceeeccccCCcccccccccCcccCCHHH
Confidence            9999 7999999999999999886                    799999999987643       23346788999999


Q ss_pred             cCCC----CCcHHHHHHHh
Q psy9184         484 FEGE----GDYQFDMYRMM  498 (562)
Q Consensus       484 F~g~----~~~q~dIy~lm  498 (562)
                      +.+.    .+.++|||+..
T Consensus       178 l~~~~~~~~~~~sDiwS~G  196 (276)
T d1uwha_         178 IRMQDKNPYSFQSDVYAFG  196 (276)
T ss_dssp             HTTCSSCCCCHHHHHHHHH
T ss_pred             HhcccCCCCCchhhhhhhH
Confidence            8653    35568998853

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=8.9e-34  Score=287.29  Aligned_cols=239  Identities=17%  Similarity=0.159  Sum_probs=175.8

Q ss_pred             CCCceeeeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCccccc
Q psy9184         261 SALKNCKKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTEL  334 (562)
Q Consensus       261 ~~y~~~~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~l  334 (562)
                      ++|++++.||+|+||+||+|      +.||||++........  ......+.+.+|+.+|+.++|               
T Consensus        10 d~Y~~~~~lG~G~fg~Vy~~~~~~~~~~~AvK~i~~~~~~~~--~~~~~~~~~~~E~~il~~l~H---------------   72 (293)
T d1jksa_          10 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSS--RRGVSREDIEREVSILKEIQH---------------   72 (293)
T ss_dssp             GTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTC--SSSBCHHHHHHHHHHHHHCCC---------------
T ss_pred             cCEEEeEEEecCCCeEEEEEEECCCCCEEEEEEEEhhhcchh--hhhHHHHHHHHHHHHHHhCCC---------------
Confidence            57999999999999999999      7999999987542211  112234678999999999998               


Q ss_pred             ccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc---cCCHHHHHHHHHHHHHHHHH
Q psy9184         335 LKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK---YRSPNQTYAMILQVVFSLAV  411 (562)
Q Consensus       335 ~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~---~l~e~~i~~I~~QIl~aL~y  411 (562)
                                 ||||+++++|.+             ++.+|||||||+||++.+.+.   .+++.+++.++.||+.||+|
T Consensus        73 -----------pnIv~~~~~~~~-------------~~~~~iv~E~~~gg~L~~~i~~~~~l~~~~~~~~~~qi~~al~y  128 (293)
T d1jksa_          73 -----------PNVITLHEVYEN-------------KTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYY  128 (293)
T ss_dssp             -----------TTBCCEEEEEEC-------------SSEEEEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHH
T ss_pred             -----------CCCCcEEEEEEE-------------CCEEEEEEEcCCCccccchhccccccchhHHHHHHHHHHHHHHh
Confidence                       999999999986             568999999999998877664   49999999999999999999


Q ss_pred             HHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecC----CcEEEeecCCCccccCCC
Q psy9184         412 AEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVG----EKICYYDLSQDEELFEGE  487 (562)
Q Consensus       412 LH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~----~g~v~~~l~~~pelF~g~  487 (562)
                      ||+ .+|+||||||+|||++..+..                ...+||+|||+|+....    ....++..|++||++.+.
T Consensus       129 LH~-~~ivHrDiKp~Nill~~~~~~----------------~~~vkl~DfG~a~~~~~~~~~~~~~~t~~y~APE~~~~~  191 (293)
T d1jksa_         129 LHS-LQIAHFDLKPENIMLLDRNVP----------------KPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYE  191 (293)
T ss_dssp             HHH-TTEECCCCSGGGEEESCSSSS----------------SCCEEECCCTTCEECTTSCBCSCCCCCGGGCCHHHHTTC
T ss_pred             hhh-cceeecccccceEEEecCCCc----------------ccceEecchhhhhhcCCCccccccCCCCcccCHHHHcCC
Confidence            999 799999999999999887631                12699999999998754    334567889999999874


Q ss_pred             -CCcHHHHHHHhhcccCCCCCCCCCCChhhhHHHHHHHHhhcccCCCCCCCchhHHHHHHHHHHHhcCCCcCcCC
Q psy9184         488 -GDYQFDMYRMMRKQCQNNWQNFTPKNNVFWIHYLVDKATCLKKGYQYLRAPRHQAFELLEELGQNALHFDSCYE  561 (562)
Q Consensus       488 -~~~q~dIy~lm~~~~~~~W~~~~P~tn~~wl~yl~~~Ll~~~~~~~~~~~~~~~~~~~l~~l~~~~l~~~s~~~  561 (562)
                       .+..+|||++.-. ......+..|+....-.. +..........++..  .....-..+.+|..++|..+...|
T Consensus       192 ~~~~~~DiwSlGvi-lyell~g~~Pf~~~~~~~-~~~~i~~~~~~~~~~--~~~~~s~~~~~li~~~L~~dP~~R  262 (293)
T d1jksa_         192 PLGLEADMWSIGVI-TYILLSGASPFLGDTKQE-TLANVSAVNYEFEDE--YFSNTSALAKDFIRRLLVKDPKKR  262 (293)
T ss_dssp             CBCTHHHHHHHHHH-HHHHHHSSCSSCCSSHHH-HHHHHHTTCCCCCHH--HHTTSCHHHHHHHHTTSCSSGGGS
T ss_pred             CCCCcccchhhhHH-HHHHHcCCCCCCCCCHHH-HHHHHHhcCCCCCch--hcCCCCHHHHHHHHHHccCChhHC
Confidence             5667999985443 323344445553222111 122222211122110  001113467788899999887765

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1e-33  Score=291.21  Aligned_cols=230  Identities=13%  Similarity=0.137  Sum_probs=173.4

Q ss_pred             CCCceeeeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCccccc
Q psy9184         261 SALKNCKKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTEL  334 (562)
Q Consensus       261 ~~y~~~~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~l  334 (562)
                      ++|++.+.||+|+||+||+|      +.||||+++...         .....+.+|+.+|+.++|               
T Consensus         5 ~rY~i~~~lG~G~fg~Vy~~~~~~~~~~~AiK~i~~~~---------~~~~~~~~Ei~il~~l~H---------------   60 (321)
T d1tkia_           5 EKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKG---------TDQVLVKKEISILNIARH---------------   60 (321)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCT---------HHHHHHHHHHHHHHHSCC---------------
T ss_pred             cceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEcCCc---------ccHHHHHHHHHHHHhCCC---------------
Confidence            67999999999999999999      789999998753         112457899999999998               


Q ss_pred             ccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc----cCCHHHHHHHHHHHHHHHH
Q psy9184         335 LKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK----YRSPNQTYAMILQVVFSLA  410 (562)
Q Consensus       335 ~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~----~l~e~~i~~I~~QIl~aL~  410 (562)
                                 |||++++++|.+             ++.+|+|||||+||++.+.+.    .+++.+++.|+.||+.||.
T Consensus        61 -----------pnIv~~~~~~~~-------------~~~~~lvmE~~~gg~L~~~i~~~~~~l~e~~~~~i~~qi~~al~  116 (321)
T d1tkia_          61 -----------RNILHLHESFES-------------MEELVMIFEFISGLDIFERINTSAFELNEREIVSYVHQVCEALQ  116 (321)
T ss_dssp             -----------TTBCCEEEEEEE-------------TTEEEEEECCCCCCBHHHHHTSSSCCCCHHHHHHHHHHHHHHHH
T ss_pred             -----------CCCCeEEEEEEE-------------CCEEEEEEecCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHH
Confidence                       999999999986             568999999999998877764    3899999999999999999


Q ss_pred             HHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecCC----cEEEeecCCCccccCC
Q psy9184         411 VAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVGE----KICYYDLSQDEELFEG  486 (562)
Q Consensus       411 yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~~----g~v~~~l~~~pelF~g  486 (562)
                      |||+ +||+||||||+|||++.++.                  ..+||+|||+|+.....    ...++..|++||.+.+
T Consensus       117 yLH~-~~iiHrDlKp~NIll~~~~~------------------~~ikl~DFG~~~~~~~~~~~~~~~~t~~y~ape~~~~  177 (321)
T d1tkia_         117 FLHS-HNIGHFDIRPENIIYQTRRS------------------STIKIIEFGQARQLKPGDNFRLLFTAPEYYAPEVHQH  177 (321)
T ss_dssp             HHHH-TTEECCCCCGGGEEESSSSC------------------CCEEECCCTTCEECCTTCEEEEEESCGGGSCHHHHTT
T ss_pred             HHHH-cCCCcccccccceeecCCCc------------------eEEEEcccchhhccccCCcccccccccccccchhccC
Confidence            9999 79999999999999986542                  27999999999987652    2345677889998877


Q ss_pred             C-CCcHHHHHHHhhcccCCCCCCCCCCChhhhHHHHHHHHhhcccCCCCCCCchhHHHHHHHHHHHhcCCCcCcCC
Q psy9184         487 E-GDYQFDMYRMMRKQCQNNWQNFTPKNNVFWIHYLVDKATCLKKGYQYLRAPRHQAFELLEELGQNALHFDSCYE  561 (562)
Q Consensus       487 ~-~~~q~dIy~lm~~~~~~~W~~~~P~tn~~wl~yl~~~Ll~~~~~~~~~~~~~~~~~~~l~~l~~~~l~~~s~~~  561 (562)
                      . ++..+|||++.-. ......+..|+.... ..-+....+.....++..  .....-..+.+|.++||+++...|
T Consensus       178 ~~~~~~~DiWSlGvi-ly~ll~G~~Pf~~~~-~~~~~~~i~~~~~~~~~~--~~~~~s~~~~~li~~~L~~dp~~R  249 (321)
T d1tkia_         178 DVVSTATDMWSLGTL-VYVLLSGINPFLAET-NQQIIENIMNAEYTFDEE--AFKEISIEAMDFVDRLLVKERKSR  249 (321)
T ss_dssp             CEECHHHHHHHHHHH-HHHHHHSSCTTCCSS-HHHHHHHHHHTCCCCCHH--HHTTSCHHHHHHHHTTSCSSGGGS
T ss_pred             CCCCchhhcccHHHH-HHHHHhCCCCCCCCC-HHHHHHHHHhCCCCCChh--hccCCCHHHHHHHHHHccCChhHC
Confidence            4 4666999875433 334455566664332 112223333312222210  000113467888999999887765

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=6.8e-34  Score=287.94  Aligned_cols=174  Identities=24%  Similarity=0.264  Sum_probs=148.1

Q ss_pred             CCCCCceeeeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCccc
Q psy9184         259 PSSALKNCKKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFT  332 (562)
Q Consensus       259 ~~~~y~~~~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv  332 (562)
                      ..++|++.++||+|+||+||+|      +.||||+++...         ...+++.+|+.+|++++|             
T Consensus        15 ~~~~~~~~~~iG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~---------~~~~~~~~E~~il~~l~H-------------   72 (287)
T d1opja_          15 ERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT---------MEVEEFLKEAAVMKEIKH-------------   72 (287)
T ss_dssp             CGGGEEEEEETTTTTTSSEEEEEEGGGTEEEEEEECCTTC---------SCHHHHHHHHHHHHHCCC-------------
T ss_pred             cHHHeEEeeEEeeCCCeEEEEEEECCCCeEEEEEEECCcc---------chHHHHHHHHHHHHhCCC-------------
Confidence            3467899999999999999999      689999987543         123578899999999998             


Q ss_pred             ccccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc-----cCCHHHHHHHHHHHHH
Q psy9184         333 ELLKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK-----YRSPNQTYAMILQVVF  407 (562)
Q Consensus       333 ~l~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~-----~l~e~~i~~I~~QIl~  407 (562)
                                   ||||+++++|.+             ++.+|+|||||++|++...+.     .+++..+..++.||+.
T Consensus        73 -------------pnIv~~~~~~~~-------------~~~~~iv~E~~~~g~l~~~l~~~~~~~~~~~~~~~i~~qi~~  126 (287)
T d1opja_          73 -------------PNLVQLLGVCTR-------------EPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISS  126 (287)
T ss_dssp             -------------TTBCCEEEEECS-------------SSSCEEEEECCTTCBHHHHHHHSCTTTSCHHHHHHHHHHHHH
T ss_pred             -------------CCEecCCccEee-------------CCeeEEEeecccCcchHHHhhhccccchHHHHHHHHHHHHHH
Confidence                         999999999875             558899999999998877663     3899999999999999


Q ss_pred             HHHHHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecC------CcEEEeecCCCc
Q psy9184         408 SLAVAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVG------EKICYYDLSQDE  481 (562)
Q Consensus       408 aL~yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~------~g~v~~~l~~~p  481 (562)
                      ||+|||+ .||+||||||+|||++.++                    .+||+|||+|+....      .++.++..|++|
T Consensus       127 gL~yLH~-~~iiHrDlKp~NILl~~~~--------------------~~Kl~DFG~a~~~~~~~~~~~~~~~g~~~y~aP  185 (287)
T d1opja_         127 AMEYLEK-KNFIHRDLAARNCLVGENH--------------------LVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAP  185 (287)
T ss_dssp             HHHHHHH-TTCCCSCCSGGGEEECGGG--------------------CEEECCCCCTTTCCSSSSEEETTEEECGGGCCH
T ss_pred             HHHHHHH-CCcccCccccCeEEECCCC--------------------cEEEccccceeecCCCCceeeccccccccccCh
Confidence            9999999 7999999999999999886                    799999999987654      455677889999


Q ss_pred             cccCC-CCCcHHHHHHHhhcc
Q psy9184         482 ELFEG-EGDYQFDMYRMMRKQ  501 (562)
Q Consensus       482 elF~g-~~~~q~dIy~lm~~~  501 (562)
                      |.+.+ ..+.++|||+..-..
T Consensus       186 E~~~~~~~~~k~DiwS~Gv~l  206 (287)
T d1opja_         186 ESLAYNKFSIKSDVWAFGVLL  206 (287)
T ss_dssp             HHHHHCCCSHHHHHHHHHHHH
T ss_pred             HHHcCCCCCchhhhhhHHHHH
Confidence            98765 567779999865443

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.5e-33  Score=290.04  Aligned_cols=231  Identities=17%  Similarity=0.159  Sum_probs=171.3

Q ss_pred             CCCCCceeeeeeccCceEEEEE-----------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCC
Q psy9184         259 PSSALKNCKKIGEGVYGEVFKL-----------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENS  327 (562)
Q Consensus       259 ~~~~y~~~~~LG~GsfG~Vyka-----------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~  327 (562)
                      +.++|++.++||+|+||+||+|           ..||+|++....       .......+.+|+.+++++.+        
T Consensus        35 ~~~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vavK~~~~~~-------~~~~~~~~~~E~~~l~~l~~--------   99 (325)
T d1rjba_          35 PRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKA-------DSSEREALMSELKMMTQLGS--------   99 (325)
T ss_dssp             CGGGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC-------------CHHHHHHHHHHHHHCC--------
T ss_pred             CHHHeEEeeEEeeCCCeEEEEEEEcCCCcccceeEEEEEEecccc-------CHHHHHHHHHHHHHHHHhcC--------
Confidence            4578999999999999999999           259999987543       22334578899999999843        


Q ss_pred             CCcccccccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc----------------
Q psy9184         328 TPCFTELLKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK----------------  391 (562)
Q Consensus       328 ~p~fv~l~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~----------------  391 (562)
                                       |||||+++++|.+             .+.+|+|||||+||++.+.+.                
T Consensus       100 -----------------HpnIv~l~~~~~~-------------~~~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~  149 (325)
T d1rjba_         100 -----------------HENIVNLLGACTL-------------SGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQ  149 (325)
T ss_dssp             -----------------CTTBCCEEEEECS-------------SSSCEEEEECCTTCBHHHHHHTTTTCC----------
T ss_pred             -----------------CCcEeEEEEEEee-------------CCeEEEEEEcCCCCcHHHHHHhccCCCcchhhhhccc
Confidence                             3999999999975             558999999999998877652                


Q ss_pred             ----------cCCHHHHHHHHHHHHHHHHHHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEec
Q psy9184         392 ----------YRSPNQTYAMILQVVFSLAVAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDF  461 (562)
Q Consensus       392 ----------~l~e~~i~~I~~QIl~aL~yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DF  461 (562)
                                .+++.+++.++.||+.||+|||+ .+|+||||||+|||++.++                    .+||+||
T Consensus       150 ~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~-~~IiHRDlKp~Nill~~~~--------------------~~Kl~DF  208 (325)
T d1rjba_         150 KRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEF-KSCVHRDLAARNVLVTHGK--------------------VVKICDF  208 (325)
T ss_dssp             -----------CCHHHHHHHHHHHHHHHHHHHH-TTEEETTCSGGGEEEETTT--------------------EEEECCC
T ss_pred             cccccccccCCCCHHHHHHHHHHHHHHHHHHHh-CCeeeccCchhccccccCC--------------------eEEEeec
Confidence                      27889999999999999999999 7999999999999999886                    8999999


Q ss_pred             cceeeecC-------CcEEEeecCCCccccCC-CCCcHHHHHHHhhcccCCCCC-CCCCCChhhhHHHHHHHHhhcccCC
Q psy9184         462 TISRCFVG-------EKICYYDLSQDEELFEG-EGDYQFDMYRMMRKQCQNNWQ-NFTPKNNVFWIHYLVDKATCLKKGY  532 (562)
Q Consensus       462 GLSr~~~~-------~g~v~~~l~~~pelF~g-~~~~q~dIy~lm~~~~~~~W~-~~~P~tn~~wl~yl~~~Ll~~~~~~  532 (562)
                      |+|+....       .+..++..|++||++.+ ..+.++|||+..-. +.+.+. +..|+.....-..+.. ++..+..+
T Consensus       209 Gla~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~DiwS~Gvi-l~emlt~g~~Pf~~~~~~~~~~~-~~~~~~~~  286 (325)
T d1rjba_         209 GLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGIL-LWEIFSLGVNPYPGIPVDANFYK-LIQNGFKM  286 (325)
T ss_dssp             GGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHH-HHHHTTTSCCSSTTCCCSHHHHH-HHHTTCCC
T ss_pred             cccccccCCCceeeeccccCCCccCChHHHcCCCCCcceeccchhHH-HHHHHhCCCCCCCCCCHHHHHHH-HHhcCCCC
Confidence            99987654       35667888999997754 66777999885433 334443 4556543221222222 33313333


Q ss_pred             CCCCCchhHHHHHHHHHHHhcCCCcCcCC
Q psy9184         533 QYLRAPRHQAFELLEELGQNALHFDSCYE  561 (562)
Q Consensus       533 ~~~~~~~~~~~~~l~~l~~~~l~~~s~~~  561 (562)
                      +.+..    .-..+.+|+..+|+.+...|
T Consensus       287 ~~p~~----~~~~l~~li~~cl~~dP~~R  311 (325)
T d1rjba_         287 DQPFY----ATEEIYIIMQSCWAFDSRKR  311 (325)
T ss_dssp             CCCTT----CCHHHHHHHHHHTCSSGGGS
T ss_pred             CCCCc----CCHHHHHHHHHHcCCChhHC
Confidence            32221    13467888999999888765

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=100.00  E-value=1.1e-33  Score=283.83  Aligned_cols=190  Identities=16%  Similarity=0.200  Sum_probs=149.8

Q ss_pred             CCCceeeeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCccccc
Q psy9184         261 SALKNCKKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTEL  334 (562)
Q Consensus       261 ~~y~~~~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~l  334 (562)
                      ++|++.+.||+|+||.||+|      +.||||+++...     .........+.+|+.+++.++|               
T Consensus         7 drY~i~~~lG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~-----~~~~~~~~~~~~E~~~l~~~~h---------------   66 (277)
T d1o6ya_           7 DRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADL-----ARDPSFYLRFRREAQNAAALNH---------------   66 (277)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTT-----TTCHHHHHHHHHHHHHHHTCCC---------------
T ss_pred             ceeEEeEEEeeCCCeEEEEEEECCCCCEEEEEEEchhh-----ccCHHHHHHHHHHHHHHHhcCC---------------
Confidence            67999999999999999999      899999998754     2234556788999999999998               


Q ss_pred             ccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc---cCCHHHHHHHHHHHHHHHHH
Q psy9184         335 LKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK---YRSPNQTYAMILQVVFSLAV  411 (562)
Q Consensus       335 ~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~---~l~e~~i~~I~~QIl~aL~y  411 (562)
                                 |||+++++++....         .....+|+|||||+||++...+.   .+++.+++.++.||+.||+|
T Consensus        67 -----------pniv~~~~~~~~~~---------~~~~~~~lvmE~~~g~~L~~~~~~~~~l~~~~~~~i~~qi~~al~~  126 (277)
T d1o6ya_          67 -----------PAIVAVYDTGEAET---------PAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNF  126 (277)
T ss_dssp             -----------TTBCCEEEEEEEEC---------SSSEEEEEEEECCCEEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHH
T ss_pred             -----------CCCCcccceeeecc---------CCCceEEEEEECCCCCEehhhhcccCCCCHHHHHHHHHHHHHHHHH
Confidence                       99999999987632         01336899999999997765553   49999999999999999999


Q ss_pred             HHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecC--------CcEEEeecCCCccc
Q psy9184         412 AEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVG--------EKICYYDLSQDEEL  483 (562)
Q Consensus       412 LH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~--------~g~v~~~l~~~pel  483 (562)
                      ||+ .||+||||||+|||++.++                    .++|+|||+++....        ...+++..|++||+
T Consensus       127 lH~-~~iiHrDiKP~NIll~~~~--------------------~~~l~d~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~  185 (277)
T d1o6ya_         127 SHQ-NGIIHRDVKPANIMISATN--------------------AVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQ  185 (277)
T ss_dssp             HHH-TTEECCCCSGGGEEEETTS--------------------CEEECCCTTCEECC----------------TTCCHHH
T ss_pred             HHh-CCccCccccCcccccCccc--------------------cceeehhhhhhhhccccccccccccccCcccccCHHH
Confidence            999 7999999999999999887                    699999999876543        34567899999999


Q ss_pred             cCCC-CCcHHHHHHHhhcccCCCCCCCCCC
Q psy9184         484 FEGE-GDYQFDMYRMMRKQCQNNWQNFTPK  512 (562)
Q Consensus       484 F~g~-~~~q~dIy~lm~~~~~~~W~~~~P~  512 (562)
                      +.+. .+..+|||++.-... ....+..|+
T Consensus       186 ~~~~~~~~~~DiwSlGvily-elltG~~Pf  214 (277)
T d1o6ya_         186 ARGDSVDARSDVYSLGCVLY-EVLTGEPPF  214 (277)
T ss_dssp             HTTCCCCHHHHHHHHHHHHH-HHHHSSCSC
T ss_pred             HcCCCCCcceecccchHHHH-HHHhCCCCC
Confidence            9884 577799988644332 233344444

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.4e-33  Score=283.18  Aligned_cols=226  Identities=20%  Similarity=0.188  Sum_probs=165.2

Q ss_pred             CCCCCceeeeeeccCceEEEEE-----eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCcccc
Q psy9184         259 PSSALKNCKKIGEGVYGEVFKL-----NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTE  333 (562)
Q Consensus       259 ~~~~y~~~~~LG~GsfG~Vyka-----~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~  333 (562)
                      +.++|++.++||+|+||.||+|     ..||||++....         ...+.+.+|+.++++++|              
T Consensus        11 ~~~~~~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~~~~~~---------~~~~~~~~E~~~l~~l~H--------------   67 (272)
T d1qpca_          11 PRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS---------MSPDAFLAEANLMKQLQH--------------   67 (272)
T ss_dssp             CGGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTS---------SCHHHHHHHHHHHHHCCC--------------
T ss_pred             CHHHeEEeEEEecCCCcEEEEEEECCCCEEEEEEEccCc---------CCHHHHHHHHHHHHhCCC--------------
Confidence            4578999999999999999999     789999997543         112568999999999998              


Q ss_pred             cccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc-----cCCHHHHHHHHHHHHHH
Q psy9184         334 LLKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK-----YRSPNQTYAMILQVVFS  408 (562)
Q Consensus       334 l~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~-----~l~e~~i~~I~~QIl~a  408 (562)
                                  ||||++++++.              ++.+|+|||||++|++.+.+.     .+++.++..|+.||+.|
T Consensus        68 ------------pnIv~~~g~~~--------------~~~~~iv~Ey~~~g~L~~~~~~~~~~~l~~~~~~~i~~qi~~g  121 (272)
T d1qpca_          68 ------------QRLVRLYAVVT--------------QEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEG  121 (272)
T ss_dssp             ------------TTBCCEEEEEC--------------SSSCEEEEECCTTCBHHHHTTSHHHHTCCHHHHHHHHHHHHHH
T ss_pred             ------------CCEeEEEeeec--------------cCCeEEEEEeCCCCcHHHHHhhcCCCCCCHHHHHHHHHHHHHH
Confidence                        99999998764              346799999999998876553     38999999999999999


Q ss_pred             HHHHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecC------CcEEEeecCCCcc
Q psy9184         409 LAVAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVG------EKICYYDLSQDEE  482 (562)
Q Consensus       409 L~yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~------~g~v~~~l~~~pe  482 (562)
                      |.|||+ .+|+||||||+||||+.++                    .+||+|||+|+....      .+..++..|++||
T Consensus       122 l~~lH~-~~ivHrDiKp~NIll~~~~--------------------~~Kl~DFGla~~~~~~~~~~~~~~~gt~~y~APE  180 (272)
T d1qpca_         122 MAFIEE-RNYIHRDLRAANILVSDTL--------------------SCKIADFGLARLIEDNEYTAREGAKFPIKWTAPE  180 (272)
T ss_dssp             HHHHHH-TTEECSCCSGGGEEECTTS--------------------CEEECCCTTCEECSSSCEECCTTCCCCTTTSCHH
T ss_pred             HHHHHh-CCcccCccchhheeeeccc--------------------ceeeccccceEEccCCccccccccCCcccccChH
Confidence            999999 7999999999999999886                    799999999998754      2344567899999


Q ss_pred             ccCC-CCCcHHHHHHHhhcccCCCCC-CCCCCChhhhHHHHHHHHhhcccCCCCCCCchhHHHHHHHHHHHhcCCCcCcC
Q psy9184         483 LFEG-EGDYQFDMYRMMRKQCQNNWQ-NFTPKNNVFWIHYLVDKATCLKKGYQYLRAPRHQAFELLEELGQNALHFDSCY  560 (562)
Q Consensus       483 lF~g-~~~~q~dIy~lm~~~~~~~W~-~~~P~tn~~wl~yl~~~Ll~~~~~~~~~~~~~~~~~~~l~~l~~~~l~~~s~~  560 (562)
                      ++.+ ..+.++|||+..-... +... +..|+.... ...+...+.. +..+..+..    .-..+.+|...+|..+...
T Consensus       181 ~~~~~~~~~~sDvwS~Gvvl~-ellt~~~~~~~~~~-~~~~~~~i~~-~~~~~~p~~----~~~~l~~li~~cl~~~P~~  253 (272)
T d1qpca_         181 AINYGTFTIKSDVWSFGILLT-EIVTHGRIPYPGMT-NPEVIQNLER-GYRMVRPDN----CPEELYQLMRLCWKERPED  253 (272)
T ss_dssp             HHHHCEECHHHHHHHHHHHHH-HHHTTTCCSSTTCC-HHHHHHHHHT-TCCCCCCTT----CCHHHHHHHHHHTCSSGGG
T ss_pred             HHhCCCCCchhhhhhhHHHHH-HHHhCCCCCCCCCC-HHHHHHHHHh-cCCCCCccc----ChHHHHHHHHHHcCCCHhH
Confidence            8875 4566799988544333 2222 222222211 1122233333 222222211    1235666777777777665


Q ss_pred             C
Q psy9184         561 E  561 (562)
Q Consensus       561 ~  561 (562)
                      |
T Consensus       254 R  254 (272)
T d1qpca_         254 R  254 (272)
T ss_dssp             S
T ss_pred             C
Confidence            4

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=1.9e-33  Score=286.31  Aligned_cols=175  Identities=21%  Similarity=0.171  Sum_probs=137.4

Q ss_pred             CCCCCCceeeeeeccCceEEEEE---------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCC
Q psy9184         258 YPSSALKNCKKIGEGVYGEVFKL---------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENST  328 (562)
Q Consensus       258 ~~~~~y~~~~~LG~GsfG~Vyka---------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~  328 (562)
                      +..++|++.++||+|+||+||+|         ..||||.+....       .....+.+.+|+.+|++++|         
T Consensus        23 i~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~-------~~~~~~~~~~E~~~l~~l~H---------   86 (299)
T d1jpaa_          23 IDISCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGY-------TEKQRRDFLSEASIMGQFDH---------   86 (299)
T ss_dssp             CCGGGEEEEEEEEECSSSEEEEEEECC---CCEEEEEEECCSSC-------CHHHHHHHHHHHHHHTTCCC---------
T ss_pred             hChhhcEEeeEEeeCCCeEEEEEEEeCCCCEEEEEEEEEECccc-------CHHHHHHHHHHHHHHHhCCC---------
Confidence            34467899999999999999999         258888887543       24455688999999999998         


Q ss_pred             CcccccccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc----cCCHHHHHHHHHH
Q psy9184         329 PCFTELLKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK----YRSPNQTYAMILQ  404 (562)
Q Consensus       329 p~fv~l~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~----~l~e~~i~~I~~Q  404 (562)
                                       ||||++++++..             ++.+|+|||||+||++.+.+.    .+++.++..++.|
T Consensus        87 -----------------pnIv~l~g~~~~-------------~~~~~iv~Ey~~~g~L~~~~~~~~~~l~~~~~~~i~~q  136 (299)
T d1jpaa_          87 -----------------PNVIHLEGVVTK-------------STPVMIITEFMENGSLDSFLRQNDGQFTVIQLVGMLRG  136 (299)
T ss_dssp             -----------------TTBCCEEEEECS-------------SSSCEEEEECCTTEEHHHHHHTTTTCSCHHHHHHHHHH
T ss_pred             -----------------CCCccEEEEEee-------------CCEEEEEEEecCCCcceeeeccccCCCCHHHHHHHHHH
Confidence                             999999999865             558999999999997765443    3899999999999


Q ss_pred             HHHHHHHHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecC----------CcEEE
Q psy9184         405 VVFSLAVAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVG----------EKICY  474 (562)
Q Consensus       405 Il~aL~yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~----------~g~v~  474 (562)
                      |+.||.|||+ ++|+||||||+|||++.++                    .+||+|||+|+....          .+..+
T Consensus       137 ia~gl~yLH~-~~iiHrDlKp~NILl~~~~--------------------~~Kl~DFGla~~~~~~~~~~~~~~~~~~~~  195 (299)
T d1jpaa_         137 IAAGMKYLAD-MNYVHRDLAARNILVNSNL--------------------VCKVSDFGLSRFLEDDTSDPTYTSALGGKI  195 (299)
T ss_dssp             HHHHHHHHHH-TTCCCSCCCGGGEEECTTC--------------------CEEECCC-----------------------
T ss_pred             HHHHHHHHhh-CCCccCccccceEEECCCC--------------------cEEECCcccceEccCCCCcceeeecccccC
Confidence            9999999999 7999999999999999886                    799999999987653          22345


Q ss_pred             eecCCCccccCC-CCCcHHHHHHHhh
Q psy9184         475 YDLSQDEELFEG-EGDYQFDMYRMMR  499 (562)
Q Consensus       475 ~~l~~~pelF~g-~~~~q~dIy~lm~  499 (562)
                      +..|++||.+.+ ..+..+|||+..-
T Consensus       196 t~~y~aPE~~~~~~~~~~sDvwS~Gv  221 (299)
T d1jpaa_         196 PIRWTAPEAIQYRKFTSASDVWSYGI  221 (299)
T ss_dssp             CGGGSCHHHHHSCCCCHHHHHHHHHH
T ss_pred             CccccCHHHHhcCCCCcccccccchH
Confidence            678999998876 4566799988533

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

Probab=100.00  E-value=6.2e-33  Score=279.67  Aligned_cols=238  Identities=16%  Similarity=0.179  Sum_probs=177.5

Q ss_pred             CCCceeeeeeccCceEEEEE------eeEEEEEeecCCCCCCcc-hhHHHHHHHHHHHHHHHhcCCccccCCCCCCcccc
Q psy9184         261 SALKNCKKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNG-EEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTE  333 (562)
Q Consensus       261 ~~y~~~~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~-~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~  333 (562)
                      ++|++.+.||+|+||+||+|      +.||||++.+........ ..+...+.+.+|+.++++++.              
T Consensus         3 ~~y~~~~~iG~G~~g~V~~~~~~~~~~~~AvK~i~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~--------------   68 (277)
T d1phka_           3 ENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSG--------------   68 (277)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTT--------------
T ss_pred             ccCEEceEEecCcCeEEEEEEECCCCCEEEEEEEecccccchhHHHHHHHHHHHHHHHHHHHHhcC--------------
Confidence            67999999999999999999      799999998865332222 223445678999999999984              


Q ss_pred             cccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc---cCCHHHHHHHHHHHHHHHH
Q psy9184         334 LLKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK---YRSPNQTYAMILQVVFSLA  410 (562)
Q Consensus       334 l~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~---~l~e~~i~~I~~QIl~aL~  410 (562)
                                 ||||++++++|.+             ++.+|||||||+||++.+.+.   .+++.+++.++.||+.||+
T Consensus        69 -----------hpnIv~~~~~~~~-------------~~~~~ivmE~~~~g~L~~~l~~~~~l~e~~~~~~~~qi~~al~  124 (277)
T d1phka_          69 -----------HPNIIQLKDTYET-------------NTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVIC  124 (277)
T ss_dssp             -----------CTTBCCEEEEEEC-------------SSEEEEEEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHH
T ss_pred             -----------CCCeEEEEeeccc-------------CcceEEEEEcCCCchHHHHHHhcCCCCHHHHHHHHHHHHHHHH
Confidence                       3999999999986             569999999999998877764   4999999999999999999


Q ss_pred             HHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecC----CcEEEeecCCCccccCC
Q psy9184         411 VAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVG----EKICYYDLSQDEELFEG  486 (562)
Q Consensus       411 yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~----~g~v~~~l~~~pelF~g  486 (562)
                      |||+ +||+||||||+|||++.++                    .+||+|||+|+....    ...+++..|++||.+.+
T Consensus       125 ~lH~-~~ivHrDlkp~Nill~~~~--------------------~~kl~DFG~a~~~~~~~~~~~~~gt~~y~~PE~~~~  183 (277)
T d1phka_         125 ALHK-LNIVHRDLKPENILLDDDM--------------------NIKLTDFGFSCQLDPGEKLREVCGTPSYLAPEIIEC  183 (277)
T ss_dssp             HHHH-TTEECSCCSGGGEEECTTC--------------------CEEECCCTTCEECCTTCCBCCCCSCGGGCCHHHHHH
T ss_pred             HHHH-cCCcccccccceEEEcCCC--------------------CeEEccchheeEccCCCceeeeeccCCCCCHHHhhc
Confidence            9999 7999999999999999886                    799999999998764    23345778899998764


Q ss_pred             -------CCCcHHHHHHHhhcccCCCCCCCCCCChhhhHHHHHHHHhhcccCCCCCCCchhHHHHHHHHHHHhcCCCcCc
Q psy9184         487 -------EGDYQFDMYRMMRKQCQNNWQNFTPKNNVFWIHYLVDKATCLKKGYQYLRAPRHQAFELLEELGQNALHFDSC  559 (562)
Q Consensus       487 -------~~~~q~dIy~lm~~~~~~~W~~~~P~tn~~wl~yl~~~Ll~~~~~~~~~~~~~~~~~~~l~~l~~~~l~~~s~  559 (562)
                             ..+.+.|||++.-... .+-.+..|+...... .+....+.....++.+.  ....-..+.+|..++|+.+..
T Consensus       184 ~~~~~~~~~~~~~DiwslGvily-eml~g~~Pf~~~~~~-~~~~~i~~~~~~~~~~~--~~~~s~~~~~li~~~L~~~p~  259 (277)
T d1phka_         184 SMNDNHPGYGKEVDMWSTGVIMY-TLLAGSPPFWHRKQM-LMLRMIMSGNYQFGSPE--WDDYSDTVKDLVSRFLVVQPQ  259 (277)
T ss_dssp             HHCTTSCCBCTHHHHHHHHHHHH-HHHHSSCSSCCSSHH-HHHHHHHHTCCCCCTTT--GGGSCHHHHHHHHHHCCSSGG
T ss_pred             cccccCCCCCchheEcccchhhh-hhccCCCCCCCCCHH-HHHHHHHhCCCCCCCcc--cccCCHHHHHHHHHHccCChh
Confidence                   1345689988544333 333344455433212 22333343122333322  122235678889999998876


Q ss_pred             CC
Q psy9184         560 YE  561 (562)
Q Consensus       560 ~~  561 (562)
                      .|
T Consensus       260 ~R  261 (277)
T d1phka_         260 KR  261 (277)
T ss_dssp             GS
T ss_pred             HC
Confidence            65

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.2e-33  Score=278.22  Aligned_cols=172  Identities=22%  Similarity=0.242  Sum_probs=138.3

Q ss_pred             CCCCceeeeeeccCceEEEEE-----eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCccccc
Q psy9184         260 SSALKNCKKIGEGVYGEVFKL-----NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTEL  334 (562)
Q Consensus       260 ~~~y~~~~~LG~GsfG~Vyka-----~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~l  334 (562)
                      .++|++.+.||+|+||.||+|     +.||||+++...         ...+++.+|+.++++++|               
T Consensus         4 p~~~~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~i~~~~---------~~~~~~~~E~~~l~~l~H---------------   59 (263)
T d1sm2a_           4 PSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGA---------MSEEDFIEEAEVMMKLSH---------------   59 (263)
T ss_dssp             CSCEEEEEEEECCSSCCEEEEEETTTEEEEEEECCSSS---------SCHHHHHHHHHHHHHCCC---------------
T ss_pred             hHHcEEEEEEeeCCCeEEEEEEECCCCEEEEEEECCCc---------CcHHHHHHHHHHHHhcCC---------------
Confidence            467999999999999999999     679999997643         112568899999999998               


Q ss_pred             ccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc----cCCHHHHHHHHHHHHHHHH
Q psy9184         335 LKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK----YRSPNQTYAMILQVVFSLA  410 (562)
Q Consensus       335 ~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~----~l~e~~i~~I~~QIl~aL~  410 (562)
                                 |||+++++++..             ++.+|+|||||++|++.+.+.    .+++..+..++.||+.||.
T Consensus        60 -----------pnIv~~~g~~~~-------------~~~~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~i~~qia~gl~  115 (263)
T d1sm2a_          60 -----------PKLVQLYGVCLE-------------QAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMA  115 (263)
T ss_dssp             -----------TTBCCEEEEECS-------------SSSCEEEEECCTTCBHHHHHHTTTTCCCHHHHHHHHHHHHHHHH
T ss_pred             -----------CCcccccceecc-------------CCceEEEEEecCCCcHHHHhhccccCCCHHHHHHHHHHHHHHHH
Confidence                       999999998875             457899999999998877553    3789999999999999999


Q ss_pred             HHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecC------CcEEEeecCCCcccc
Q psy9184         411 VAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVG------EKICYYDLSQDEELF  484 (562)
Q Consensus       411 yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~------~g~v~~~l~~~pelF  484 (562)
                      |||+ .+|+||||||+|||++.++                    .+||+|||+|+....      .+..++..|++||++
T Consensus       116 ~lH~-~~iiHrDlKp~Nill~~~~--------------------~~Kl~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~l  174 (263)
T d1sm2a_         116 YLEE-ACVIHRDLAARNCLVGENQ--------------------VIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVF  174 (263)
T ss_dssp             HHHH-TTCCCTTCSGGGEEECGGG--------------------CEEECSCC------------------CTTSCCHHHH
T ss_pred             hhhc-cceeecccchhheeecCCC--------------------CeEecccchheeccCCCceeecceecCcccCChHHh
Confidence            9999 7999999999999999886                    799999999987654      335567789999998


Q ss_pred             CC-CCCcHHHHHHHhhc
Q psy9184         485 EG-EGDYQFDMYRMMRK  500 (562)
Q Consensus       485 ~g-~~~~q~dIy~lm~~  500 (562)
                      .+ ..+.+.|||+..-.
T Consensus       175 ~~~~~~~k~DVwS~Gvi  191 (263)
T d1sm2a_         175 SFSRYSSKSDVWSFGVL  191 (263)
T ss_dssp             TTCCCCHHHHHHHHHHH
T ss_pred             cCCCCCchhhhcchHHH
Confidence            87 45666999886433

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.98  E-value=3.5e-33  Score=288.81  Aligned_cols=233  Identities=15%  Similarity=0.200  Sum_probs=165.8

Q ss_pred             CCCceee-eeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCcccc
Q psy9184         261 SALKNCK-KIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTE  333 (562)
Q Consensus       261 ~~y~~~~-~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~  333 (562)
                      ++|+++. .||+|+||.||+|      +.||||+++..             ..+.+|+.++.++.+              
T Consensus        11 ~~y~i~~~~lG~G~fg~Vy~a~~~~~~~~vAiK~i~~~-------------~~~~~E~~~~~~~~~--------------   63 (335)
T d2ozaa1          11 DDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC-------------PKARREVELHWRASQ--------------   63 (335)
T ss_dssp             GTEEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEECS-------------HHHHHHHHHHHHHTT--------------
T ss_pred             cCEEEeeEEeeeccCeEEEEEEECCCCCEEEEEEECCc-------------HHHHHHHHHHHHhcC--------------
Confidence            5688875 5999999999999      79999999743             356789998776643              


Q ss_pred             cccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc-----cCCHHHHHHHHHHHHHH
Q psy9184         334 LLKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK-----YRSPNQTYAMILQVVFS  408 (562)
Q Consensus       334 l~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~-----~l~e~~i~~I~~QIl~a  408 (562)
                                 |||||+++++|++..         ..+..+|+|||||+||++.+.+.     .+++.+++.|+.||+.|
T Consensus        64 -----------hpnIv~l~~~~~~~~---------~~~~~~~ivmEy~~gg~L~~~i~~~~~~~l~e~~~~~i~~qi~~a  123 (335)
T d2ozaa1          64 -----------CPHIVRIVDVYENLY---------AGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEA  123 (335)
T ss_dssp             -----------STTBCCEEEEEEEEE---------TTEEEEEEEEECCCSEEHHHHHHSCSCCCEEHHHHHHHHHHHHHH
T ss_pred             -----------CCCCCeEEEEEeecc---------cCCCEEEEEEECCCCCcHHHHHHhcCCCCcCHHHHHHHHHHHHHH
Confidence                       499999999987521         11357999999999998877763     38999999999999999


Q ss_pred             HHHHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecC----CcEEEeecCCCcccc
Q psy9184         409 LAVAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVG----EKICYYDLSQDEELF  484 (562)
Q Consensus       409 L~yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~----~g~v~~~l~~~pelF  484 (562)
                      |+|||+ .||+||||||+|||++..+..                 ..+||+|||+|+....    ....++..|++||++
T Consensus       124 l~ylH~-~~iiHRDiKp~NIll~~~~~~-----------------~~~Kl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~  185 (335)
T d2ozaa1         124 IQYLHS-INIAHRDVKPENLLYTSKRPN-----------------AILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVL  185 (335)
T ss_dssp             HHHHHH-TTEECCCCSGGGEEESCSSTT-----------------CCEEECCCTTCEECCCCCCCCCCSCCCSSCCCCCC
T ss_pred             HHHHHH-cCCcccccccccccccccccc-----------------ccccccccceeeeccCCCccccccCCcccCCcHHH
Confidence            999999 799999999999999875421                 1699999999997754    334568899999999


Q ss_pred             CCC-CCcHHHHHHHhhcccCCCCCCCCCCChhh---hHHHHHHHHhhcccCCCCCCCchhHHHHHHHHHHHhcCCCcCcC
Q psy9184         485 EGE-GDYQFDMYRMMRKQCQNNWQNFTPKNNVF---WIHYLVDKATCLKKGYQYLRAPRHQAFELLEELGQNALHFDSCY  560 (562)
Q Consensus       485 ~g~-~~~q~dIy~lm~~~~~~~W~~~~P~tn~~---wl~yl~~~Ll~~~~~~~~~~~~~~~~~~~l~~l~~~~l~~~s~~  560 (562)
                      .+. ++..+|||++.-. +.....+..|+....   .+..+......  ..+.-+.......-..+.+|..+||+++...
T Consensus       186 ~~~~y~~~~DiwSlGvi-ly~lltg~~Pf~~~~~~~~~~~~~~~i~~--~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~  262 (335)
T d2ozaa1         186 GPEKYDKSCDMWSLGVI-MYILLCGYPPFYSNHGLAISPGMKTRIRM--GQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQ  262 (335)
T ss_dssp             CGGGGSHHHHHHHHHHH-HHHHTTSSCSCEETTCC--------CCCS--CSSSCCTTHHHHSCHHHHHHHHHHSCSSTTT
T ss_pred             cCCCCCHHHHHHhhchh-HHHHhhCCCCCCCCCHHHHHHHHHHHHhc--CCCCCCCcccccCCHHHHHHHHHHccCChhH
Confidence            884 5667999885433 334445555552211   11111111111  1121121111222456777788888887766


Q ss_pred             C
Q psy9184         561 E  561 (562)
Q Consensus       561 ~  561 (562)
                      |
T Consensus       263 R  263 (335)
T d2ozaa1         263 R  263 (335)
T ss_dssp             S
T ss_pred             C
Confidence            5

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

Probab=99.98  E-value=4.8e-33  Score=291.04  Aligned_cols=230  Identities=17%  Similarity=0.115  Sum_probs=165.9

Q ss_pred             CCCceeeeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHH---HHHhcCCccccCCCCCCcc
Q psy9184         261 SALKNCKKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIM---VTKETSDLQYRTENSTPCF  331 (562)
Q Consensus       261 ~~y~~~~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~---ilk~L~h~~~~~~n~~p~f  331 (562)
                      ++|++.++||+|+||.||+|      +.||||++....     .........+.+|..   +++.++|            
T Consensus         4 ddy~i~~~lG~G~fg~Vy~~~~~~t~~~vAiK~i~~~~-----~~~~~~~~~~~~e~~~~~~l~~~~h------------   66 (364)
T d1omwa3           4 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKR-----IKMKQGETLALNERIMLSLVSTGDC------------   66 (364)
T ss_dssp             TTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHH-----HHHHTCHHHHHHHHHHHHHHSSSCC------------
T ss_pred             HhCeeeeEEecCCCeEEEEEEECCCCCEEEEEEEchHH-----cchhhHHHHHHHHHHHHHHHhcCCC------------
Confidence            67999999999999999999      789999997542     111122234455544   4444555            


Q ss_pred             cccccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc---cCCHHHHHHHHHHHHHH
Q psy9184         332 TELLKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK---YRSPNQTYAMILQVVFS  408 (562)
Q Consensus       332 v~l~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~---~l~e~~i~~I~~QIl~a  408 (562)
                                    ||||+++++|.+             ++.+|+|||||+||++.+.+.   .+++.+++.++.||+.|
T Consensus        67 --------------pnIv~l~~~~~~-------------~~~~~ivmE~~~gg~L~~~l~~~~~~~e~~~~~~~~qi~~a  119 (364)
T d1omwa3          67 --------------PFIVCMSYAFHT-------------PDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILG  119 (364)
T ss_dssp             --------------TTBCCEEEEEEC-------------SSEEEEEECCCCSCBHHHHHHHHCSCCHHHHHHHHHHHHHH
T ss_pred             --------------CcEEEEEEEEEE-------------CCEEEEEEEecCCCcHHHHHHhcccccHHHHHHHHHHHHHH
Confidence                          999999999986             568999999999998877664   48999999999999999


Q ss_pred             HHHHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecC---CcEEEeecCCCccccC
Q psy9184         409 LAVAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVG---EKICYYDLSQDEELFE  485 (562)
Q Consensus       409 L~yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~---~g~v~~~l~~~pelF~  485 (562)
                      |.|||+ .||+||||||+|||++.++                    .+||+|||+|+....   ....++..|++||++.
T Consensus       120 L~ylH~-~~iiHrDlKP~NILl~~~g--------------------~iKl~DFGla~~~~~~~~~~~~GT~~y~APE~~~  178 (364)
T d1omwa3         120 LEHMHN-RFVVYRDLKPANILLDEHG--------------------HVRISDLGLACDFSKKKPHASVGTHGYMAPEVLQ  178 (364)
T ss_dssp             HHHHHH-TTEECCCCSGGGEEECSSS--------------------CEEECCCTTCEECSSSCCCSCCSCGGGCCHHHHS
T ss_pred             HHHHHH-CCccceeeccceeEEcCCC--------------------cEEEeeeceeeecCCCcccccccccccchhHHhh
Confidence            999999 7999999999999999887                    799999999997754   3456789999999986


Q ss_pred             C-C-CCcHHHHHHHhhcccCCCCCCCCCCChh--hhHHHHHHHHhhcccCCCCCCCchhHHHHHHHHHHHhcCCCcCcCC
Q psy9184         486 G-E-GDYQFDMYRMMRKQCQNNWQNFTPKNNV--FWIHYLVDKATCLKKGYQYLRAPRHQAFELLEELGQNALHFDSCYE  561 (562)
Q Consensus       486 g-~-~~~q~dIy~lm~~~~~~~W~~~~P~tn~--~wl~yl~~~Ll~~~~~~~~~~~~~~~~~~~l~~l~~~~l~~~s~~~  561 (562)
                      + . ++..+|||++.-. +..+..+..|+...  .-...+..........++..      .-..+..|+.++|..+...|
T Consensus       179 ~~~~~~~~~DiwSlGvi-lyemltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~------~s~~~~~li~~~L~~dP~~R  251 (364)
T d1omwa3         179 KGVAYDSSADWFSLGCM-LFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVELPDS------FSPELRSLLEGLLQRDVNRR  251 (364)
T ss_dssp             TTCCCCTHHHHHHHHHH-HHHHHHSSCSSCSSCSSCHHHHHHHSSSCCCCCCSS------SCHHHHHHHHHHTCSSTTTS
T ss_pred             cCCCCCcccchhHHHHH-HHHHHhCCCCCCCCCHHHHHHHHHhcccCCCCCCCC------CCHHHHHHHHHHcccCHHHh
Confidence            4 3 5677999885433 33333444444211  11122222222211112111      12357788899998888776


Q ss_pred             C
Q psy9184         562 M  562 (562)
Q Consensus       562 ~  562 (562)
                      +
T Consensus       252 ~  252 (364)
T d1omwa3         252 L  252 (364)
T ss_dssp             T
T ss_pred             C
Confidence            3

>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Vascular endothelial growth factor receptor 2 (kdr)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=9e-33  Score=280.01  Aligned_cols=178  Identities=21%  Similarity=0.263  Sum_probs=139.2

Q ss_pred             CCCCCCceeeeeeccCceEEEEE-----------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCC
Q psy9184         258 YPSSALKNCKKIGEGVYGEVFKL-----------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTEN  326 (562)
Q Consensus       258 ~~~~~y~~~~~LG~GsfG~Vyka-----------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n  326 (562)
                      ++.++|++.++||+|+||.||+|           +.||||+++...       .....+.+.+|..++.++.|       
T Consensus        10 i~~~~y~~~~~iG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~-------~~~~~~~~~~e~~~l~~~~~-------   75 (299)
T d1ywna1          10 FPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGA-------THSEHRALMSELKILIHIGH-------   75 (299)
T ss_dssp             CCGGGEEEEEEEEECSSCEEEEEEEESTTSSSCEEEEEEEEC-----------CHHHHHHHHHHHHHHHHHCC-------
T ss_pred             ccHHHEEEeeEEeecCCeEEEEEEEcCCCcccCCeEEEEEEEcccc-------CcHHHHHHHHHHHHHHhhcC-------
Confidence            34578999999999999999999           479999987543       23445678899999999987       


Q ss_pred             CCCcccccccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc---------------
Q psy9184         327 STPCFTELLKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK---------------  391 (562)
Q Consensus       327 ~~p~fv~l~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~---------------  391 (562)
                                        |+||+.+++++..            .+..+|+|||||++|++.+.+.               
T Consensus        76 ------------------h~~iv~~~~~~~~------------~~~~~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~  125 (299)
T d1ywna1          76 ------------------HLNVVNLLGACTK------------PGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPED  125 (299)
T ss_dssp             ------------------CTTBCCEEEEECS------------TTSCCEEEEECCTTCBHHHHHHHTGGGBCC-------
T ss_pred             ------------------CCeEEEeeeeecc------------CCCeEEEEEEecCCCcHHHHHHhccccccccccchhh
Confidence                              6999999887754            2457899999999998876652               


Q ss_pred             ----cCCHHHHHHHHHHHHHHHHHHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeee
Q psy9184         392 ----YRSPNQTYAMILQVVFSLAVAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCF  467 (562)
Q Consensus       392 ----~l~e~~i~~I~~QIl~aL~yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~  467 (562)
                          .+++.++..++.||+.||.|||+ ++|+||||||+|||++.++                    .+||+|||+|+..
T Consensus       126 ~~~~~l~~~~~~~~~~qi~~gl~ylH~-~~ivHrDlKp~NILl~~~~--------------------~~Kl~DFGla~~~  184 (299)
T d1ywna1         126 LYKDFLTLEHLICYSFQVAKGMEFLAS-RKCIHRDLAARNILLSEKN--------------------VVKICDFGLARDI  184 (299)
T ss_dssp             ----CBCHHHHHHHHHHHHHHHHHHHH-TTCCCSCCCGGGEEECGGG--------------------CEEECC------C
T ss_pred             hhcccCCHHHHHHHHHHHHHHHHHHHh-CCCcCCcCCccceeECCCC--------------------cEEEccCcchhhc
Confidence                27899999999999999999999 7999999999999999876                    7999999999875


Q ss_pred             cC-------CcEEEeecCCCccccCC-CCCcHHHHHHHhhc
Q psy9184         468 VG-------EKICYYDLSQDEELFEG-EGDYQFDMYRMMRK  500 (562)
Q Consensus       468 ~~-------~g~v~~~l~~~pelF~g-~~~~q~dIy~lm~~  500 (562)
                      ..       ....++..|++||++.+ ..+..+|||+..-.
T Consensus       185 ~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~sDiwS~Gvi  225 (299)
T d1ywna1         185 YKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVL  225 (299)
T ss_dssp             CSCTTSCCTTSCCCGGGGCCHHHHHHCCCCHHHHHHHHHHH
T ss_pred             cccccccccCceeeCccccchhHhhcCCCCcccceeehHHH
Confidence            43       23567888999998776 45667999886433

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=1.3e-32  Score=282.73  Aligned_cols=228  Identities=16%  Similarity=0.142  Sum_probs=171.5

Q ss_pred             CCCceeeeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHH-hcCCccccCCCCCCcccc
Q psy9184         261 SALKNCKKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTK-ETSDLQYRTENSTPCFTE  333 (562)
Q Consensus       261 ~~y~~~~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk-~L~h~~~~~~n~~p~fv~  333 (562)
                      ++|++++.||+|+||+||+|      +.||||++++..     .......+.+..|..++. .++|              
T Consensus         2 ddy~i~~~iG~G~fg~Vy~~~~~~t~~~vAvK~i~k~~-----~~~~~~~~~~~~e~~~l~~~~~h--------------   62 (320)
T d1xjda_           2 EDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDV-----VLMDDDVECTMVEKRVLSLAWEH--------------   62 (320)
T ss_dssp             TTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHH-----HHHTTCHHHHHHHHHHHHHHTTC--------------
T ss_pred             CCeEEeeEEecCCCcEEEEEEECCCCCEEEEEEEchhh-----ccChHHHHHHHHHHHHHHHhCCC--------------
Confidence            57999999999999999999      899999998642     112233456777877765 5777              


Q ss_pred             cccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc---cCCHHHHHHHHHHHHHHHH
Q psy9184         334 LLKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK---YRSPNQTYAMILQVVFSLA  410 (562)
Q Consensus       334 l~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~---~l~e~~i~~I~~QIl~aL~  410 (562)
                                  |||++++++|.+             ++.+|+|||||+||++.+.+.   .+++.+++.++.||+.||.
T Consensus        63 ------------p~Iv~~~~~~~~-------------~~~~yivmEy~~~g~L~~~i~~~~~~~e~~~~~~~~qi~~al~  117 (320)
T d1xjda_          63 ------------PFLTHMFCTFQT-------------KENLFFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQ  117 (320)
T ss_dssp             ------------TTBCCEEEEEEC-------------SSEEEEEEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHH
T ss_pred             ------------CcEEEEEEEEcc-------------CCceeEEEeecCCCcHHHHhhccCCCCHHHHHHHHHHHHHHHH
Confidence                        999999999986             568999999999998877664   4999999999999999999


Q ss_pred             HHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecC-----CcEEEeecCCCccccC
Q psy9184         411 VAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVG-----EKICYYDLSQDEELFE  485 (562)
Q Consensus       411 yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~-----~g~v~~~l~~~pelF~  485 (562)
                      |||+ ++|+||||||+|||++..+                    .+||+|||+|+....     ....++..|++||++.
T Consensus       118 ylH~-~~iiHrDikp~NiL~~~~~--------------------~~kl~DFG~a~~~~~~~~~~~~~~gt~~y~aPE~~~  176 (320)
T d1xjda_         118 FLHS-KGIVYRDLKLDNILLDKDG--------------------HIKIADFGMCKENMLGDAKTNTFCGTPDYIAPEILL  176 (320)
T ss_dssp             HHHH-TTCBCCCCCGGGEEECTTS--------------------CEEECCCTTCBCCCCTTCCBCCCCSCGGGCCHHHHT
T ss_pred             HHHh-CCeeeccCcccceeecCCC--------------------ceeccccchhhhcccccccccccCCCCCcCCHHHHc
Confidence            9999 7999999999999999887                    799999999986543     2345678899999988


Q ss_pred             C-CCCcHHHHHHHhhcccCCCCCCCCCCChhhhHHHHHHHHhhcccCCCCCCCchhHHHHHHHHHHHhcCCCcCcCC
Q psy9184         486 G-EGDYQFDMYRMMRKQCQNNWQNFTPKNNVFWIHYLVDKATCLKKGYQYLRAPRHQAFELLEELGQNALHFDSCYE  561 (562)
Q Consensus       486 g-~~~~q~dIy~lm~~~~~~~W~~~~P~tn~~wl~yl~~~Ll~~~~~~~~~~~~~~~~~~~l~~l~~~~l~~~s~~~  561 (562)
                      + .++..+|||++.-. ...+..+..|+.... ...+..+.......++..-      -..+..|.+++|+.+...|
T Consensus       177 ~~~~~~~~DiwSlGvi-lyemltG~~PF~~~~-~~~~~~~i~~~~~~~p~~~------s~~~~dli~~~L~~dP~~R  245 (320)
T d1xjda_         177 GQKYNHSVDWWSFGVL-LYEMLIGQSPFHGQD-EEELFHSIRMDNPFYPRWL------EKEAKDLLVKLFVREPEKR  245 (320)
T ss_dssp             TCCBCTHHHHHHHHHH-HHHHHHSSCSSCCSS-HHHHHHHHHHCCCCCCTTS------CHHHHHHHHHHSCSSGGGS
T ss_pred             CCCCCchhhhhhhhHH-HHHHHhCCCCCCCCC-HHHHHHHHHcCCCCCCccC------CHHHHHHHHHhcccCCCCC
Confidence            8 45667999885433 333444555653222 1122333333122222211      2357788899998887765

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=4.9e-32  Score=273.21  Aligned_cols=172  Identities=22%  Similarity=0.202  Sum_probs=139.2

Q ss_pred             CCCCCceeeeeeccCceEEEEE----------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCC
Q psy9184         259 PSSALKNCKKIGEGVYGEVFKL----------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENST  328 (562)
Q Consensus       259 ~~~~y~~~~~LG~GsfG~Vyka----------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~  328 (562)
                      ..+.|+..+.||+|+||+||+|          ..||||++....       .......+++|+.++++++|         
T Consensus         5 ~~~~~~~~~~iG~G~fG~Vy~~~~~~~~~~~~~~vAvK~~~~~~-------~~~~~~~~~~E~~il~~l~H---------   68 (283)
T d1mqba_           5 HPSCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGY-------TEKQRVDFLGEAGIMGQFSH---------   68 (283)
T ss_dssp             CTTTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTC-------CHHHHHHHHHHHHHHHTCCC---------
T ss_pred             CHHHeEeeeEEeeCCCeEEEEEEEeCCCCEEEEEEEEEEECccc-------ChHHHHHHHHHHHHHHhcCC---------
Confidence            3456899999999999999999          269999997643       23445678999999999998         


Q ss_pred             CcccccccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc----cCCHHHHHHHHHH
Q psy9184         329 PCFTELLKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK----YRSPNQTYAMILQ  404 (562)
Q Consensus       329 p~fv~l~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~----~l~e~~i~~I~~Q  404 (562)
                                       ||||++++++.+             .+.+++|||||.+|.+.+.+.    .+++.++..++.|
T Consensus        69 -----------------~nIv~~~g~~~~-------------~~~~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~  118 (283)
T d1mqba_          69 -----------------HNIIRLEGVISK-------------YKPMMIITEYMENGALDKFLREKDGEFSVLQLVGMLRG  118 (283)
T ss_dssp             -----------------TTBCCEEEEECS-------------SSSEEEEEECCTTEEHHHHHHHTTTCSCHHHHHHHHHH
T ss_pred             -----------------CCEeeeeEEEec-------------CCceEEEEEecccCcchhhhhcccccccHHHHHHHHHH
Confidence                             999999998875             558999999999987665442    4899999999999


Q ss_pred             HHHHHHHHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecC--------CcEEEee
Q psy9184         405 VVFSLAVAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVG--------EKICYYD  476 (562)
Q Consensus       405 Il~aL~yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~--------~g~v~~~  476 (562)
                      |+.||.|||+ ++|+||||||+||||+.++                    .+||+|||+|+....        .+..++.
T Consensus       119 i~~gl~~lH~-~~iiHrDlKp~NILl~~~~--------------------~~Kl~DFGla~~~~~~~~~~~~~~~~~gt~  177 (283)
T d1mqba_         119 IAAGMKYLAN-MNYVHRDLAARNILVNSNL--------------------VCKVSDFGLSRVLEDDPEATYTTSGGKIPI  177 (283)
T ss_dssp             HHHHHHHHHH-TTCCCSCCCGGGEEECTTC--------------------CEEECCCCC-----------------CCCG
T ss_pred             HHHhhhhccc-cccccCccccceEEECCCC--------------------eEEEcccchhhcccCCCccceEeccCCCCc
Confidence            9999999999 7999999999999999886                    799999999987643        2233467


Q ss_pred             cCCCccccCC-CCCcHHHHHHH
Q psy9184         477 LSQDEELFEG-EGDYQFDMYRM  497 (562)
Q Consensus       477 l~~~pelF~g-~~~~q~dIy~l  497 (562)
                      .|++||.+.+ ..+..+|||+.
T Consensus       178 ~Y~APE~l~~~~~~~~sDI~S~  199 (283)
T d1mqba_         178 RWTAPEAISYRKFTSASDVWSF  199 (283)
T ss_dssp             GGSCHHHHHSCCCCHHHHHHHH
T ss_pred             cccCHHHHccCCCCCccccccc
Confidence            7999998876 46667999986

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=2.6e-32  Score=276.13  Aligned_cols=226  Identities=15%  Similarity=0.139  Sum_probs=163.9

Q ss_pred             CCCceee-eeeccCceEEEEE--------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCcc
Q psy9184         261 SALKNCK-KIGEGVYGEVFKL--------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCF  331 (562)
Q Consensus       261 ~~y~~~~-~LG~GsfG~Vyka--------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~f  331 (562)
                      ++|.+.+ +||+|+||+||+|        ..||||+++...       .....+.+.+|+.+|++++|            
T Consensus         8 ~~~~~~~~~iG~G~fg~Vy~~~~~~~~~~~~vAvK~l~~~~-------~~~~~~~~~~E~~il~~l~H------------   68 (285)
T d1u59a_           8 DNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGT-------EKADTEEMMREAQIMHQLDN------------   68 (285)
T ss_dssp             GGEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSSC-------CHHHHHHHHHHHHHHHHCCC------------
T ss_pred             cCeEECCcEEecccCeEEEEEEEecCCCcEEEEEEEEChhc-------CHHHHHHHHHHHHHHHhCCC------------
Confidence            5577777 4999999999999        369999997643       23455788999999999998            


Q ss_pred             cccccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc----cCCHHHHHHHHHHHHH
Q psy9184         332 TELLKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK----YRSPNQTYAMILQVVF  407 (562)
Q Consensus       332 v~l~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~----~l~e~~i~~I~~QIl~  407 (562)
                                    ||||++++++.+              +.+|||||||+||++.+.+.    .+++.++..++.||+.
T Consensus        69 --------------pnIv~l~g~~~~--------------~~~~lvmE~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~  120 (285)
T d1u59a_          69 --------------PYIVRLIGVCQA--------------EALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSM  120 (285)
T ss_dssp             --------------TTBCCEEEEEES--------------SSEEEEEECCTTEEHHHHHTTCTTTSCHHHHHHHHHHHHH
T ss_pred             --------------CCEeeEeeeecc--------------CeEEEEEEeCCCCcHHHHhhccccCCCHHHHHHHHHHHHH
Confidence                          999999998753              36899999999998766543    3899999999999999


Q ss_pred             HHHHHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecCC--------cEEEeecCC
Q psy9184         408 SLAVAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVGE--------KICYYDLSQ  479 (562)
Q Consensus       408 aL~yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~~--------g~v~~~l~~  479 (562)
                      ||+|||+ .+|+||||||+|||++.++                    .+||+|||+|+.....        ...++..|+
T Consensus       121 gL~ylH~-~~iiHrDlKp~Nill~~~~--------------------~~Kl~DFGla~~~~~~~~~~~~~~~~~gt~~y~  179 (285)
T d1u59a_         121 GMKYLEE-KNFVHRDLAARNVLLVNRH--------------------YAKISDFGLSKALGADDSYYTARSAGKWPLKWY  179 (285)
T ss_dssp             HHHHHHH-TTEECCCCSGGGEEEEETT--------------------EEEECCCTTCEECTTCSCEECCCCSSCCCGGGC
T ss_pred             HHHHHHh-CCeecCcCchhheeeccCC--------------------ceeeccchhhhcccccccccccccccccCcccc
Confidence            9999999 7999999999999999886                    8999999999987542        223456789


Q ss_pred             CccccCC-CCCcHHHHHHHhhcccCCCCC-CCCCCChhhhHHHHHHHHhhcccCCCCCCCchhHHHHHHHHHHHhcCCCc
Q psy9184         480 DEELFEG-EGDYQFDMYRMMRKQCQNNWQ-NFTPKNNVFWIHYLVDKATCLKKGYQYLRAPRHQAFELLEELGQNALHFD  557 (562)
Q Consensus       480 ~pelF~g-~~~~q~dIy~lm~~~~~~~W~-~~~P~tn~~wl~yl~~~Ll~~~~~~~~~~~~~~~~~~~l~~l~~~~l~~~  557 (562)
                      +||++.+ ..+..+|||+..-... +... +..|+.+.... -+...+.. +..++.+...    -..+.+|...++..+
T Consensus       180 aPE~~~~~~~~~ksDVwS~Gv~l~-E~lt~G~~Pf~~~~~~-~~~~~i~~-~~~~~~p~~~----~~~l~~li~~cl~~~  252 (285)
T d1u59a_         180 APECINFRKFSSRSDVWSYGVTMW-EALSYGQKPYKKMKGP-EVMAFIEQ-GKRMECPPEC----PPELYALMSDCWIYK  252 (285)
T ss_dssp             CHHHHHHCEECHHHHHHHHHHHHH-HHHTTSCCTTTTCCTH-HHHHHHHT-TCCCCCCTTC----CHHHHHHHHHTTCSS
T ss_pred             ChHHHhCCCCCccchhhcchHHHH-HHHhCCCCCCCCCCHH-HHHHHHHc-CCCCCCCCcC----CHHHHHHHHHHcCCC
Confidence            9998875 4566799988543332 2221 34444332211 12222333 3332222211    235566777777777


Q ss_pred             CcCC
Q psy9184         558 SCYE  561 (562)
Q Consensus       558 s~~~  561 (562)
                      ...|
T Consensus       253 p~~R  256 (285)
T d1u59a_         253 WEDR  256 (285)
T ss_dssp             GGGS
T ss_pred             HhHC
Confidence            6554

>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase CK2, alpha subunit
species: Rattus norvegicus [TaxId: 10116]

Probab=99.97  E-value=1.7e-31  Score=273.88  Aligned_cols=174  Identities=17%  Similarity=0.254  Sum_probs=147.4

Q ss_pred             CCCceeeeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCccccc
Q psy9184         261 SALKNCKKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTEL  334 (562)
Q Consensus       261 ~~y~~~~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~l  334 (562)
                      ++|+++++||+|+||+||+|      +.||||+++...           .+.+.+|+.+|+.+++               
T Consensus        35 d~y~i~~~LG~G~fg~V~~a~~~~~~~~vAiK~i~~~~-----------~~~~~~Ei~il~~l~~---------------   88 (328)
T d3bqca1          35 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVK-----------KKKIKREIKILENLRG---------------   88 (328)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSSC-----------HHHHHHHHHHHHHHTT---------------
T ss_pred             cCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEECHHH-----------HHHHHHHHHHHHhccC---------------
Confidence            67999999999999999999      899999997542           2467899999999975               


Q ss_pred             ccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccccCCHHHHHHHHHHHHHHHHHHHh
Q psy9184         335 LKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIKYRSPNQTYAMILQVVFSLAVAEV  414 (562)
Q Consensus       335 ~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~~l~e~~i~~I~~QIl~aL~yLH~  414 (562)
                                ||||++++++|....           ...+|+|||||.+|++......+++.+++.++.||+.||.|||+
T Consensus        89 ----------hpnIv~~~~~~~~~~-----------~~~~~~v~e~~~~~~L~~~~~~l~e~~i~~i~~qil~aL~~LH~  147 (328)
T d3bqca1          89 ----------GPNIITLADIVKDPV-----------SRTPALVFEHVNNTDFKQLYQTLTDYDIRFYMYEILKALDYCHS  147 (328)
T ss_dssp             ----------STTBCCEEEEEECTT-----------TCSEEEEEECCCSCBGGGTTTSCCHHHHHHHHHHHHHHHHHHHH
T ss_pred             ----------CCCCcEEEEEEEecC-----------CCceeEEEeecCCCcHHHHhcCCCHHHHHHHHHHHHHHHHHHhh
Confidence                      499999999987522           45799999999999887777789999999999999999999999


Q ss_pred             hCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecC----CcEEEeecCCCccccCCC--C
Q psy9184         415 ELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVG----EKICYYDLSQDEELFEGE--G  488 (562)
Q Consensus       415 ~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~----~g~v~~~l~~~pelF~g~--~  488 (562)
                       +||+||||||+|||++.++.                   .+||+|||+|+....    ...+.+..|++||++.+.  .
T Consensus       148 -~gIvHrDiKp~NILi~~~~~-------------------~vkl~DFG~a~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~  207 (328)
T d3bqca1         148 -MGIMHRDVKPHNVMIDHEHR-------------------KLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMY  207 (328)
T ss_dssp             -TTEECCCCSGGGEEEETTTT-------------------EEEECCGGGCEECCTTCCCCSCCSCGGGCCHHHHTTCCCC
T ss_pred             -cccccccccccceEEcCCCC-------------------eeeecccccceeccCCCcccccccCccccCcccccCCCCC
Confidence             79999999999999997653                   699999999998764    344567889999988774  4


Q ss_pred             CcHHHHHHHhhcc
Q psy9184         489 DYQFDMYRMMRKQ  501 (562)
Q Consensus       489 ~~q~dIy~lm~~~  501 (562)
                      +...|||++.-..
T Consensus       208 ~~~~DiwslG~~l  220 (328)
T d3bqca1         208 DYSLDMWSLGCML  220 (328)
T ss_dssp             CTHHHHHHHHHHH
T ss_pred             Ccccchhhhhhhh
Confidence            6679998864443

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=2.3e-32  Score=275.27  Aligned_cols=221  Identities=15%  Similarity=0.164  Sum_probs=159.4

Q ss_pred             eeeeccCceEEEEE--------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCccccccccc
Q psy9184         267 KKIGEGVYGEVFKL--------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTELLKCS  338 (562)
Q Consensus       267 ~~LG~GsfG~Vyka--------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~l~~~~  338 (562)
                      ++||+|+||+||+|        +.||||+++...      ......+.+.+|+.+|++++|                   
T Consensus        13 k~iG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~------~~~~~~~~~~~E~~il~~l~H-------------------   67 (277)
T d1xbba_          13 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEA------NDPALKDELLAEANVMQQLDN-------------------   67 (277)
T ss_dssp             EEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----------CHHHHHHHHHHHHHHTCCC-------------------
T ss_pred             CCcccCCCeEEEEEEEccCCcCeEEEEEEEChhh------CCHHHHHHHHHHHHHHHhCCC-------------------
Confidence            57999999999999        579999997542      123445688999999999998                   


Q ss_pred             ccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc---cCCHHHHHHHHHHHHHHHHHHHhh
Q psy9184         339 CVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK---YRSPNQTYAMILQVVFSLAVAEVE  415 (562)
Q Consensus       339 iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~---~l~e~~i~~I~~QIl~aL~yLH~~  415 (562)
                             ||||++++++.+              +..|||||||++|++.+.+.   .+++.++..++.||+.||+|||+ 
T Consensus        68 -------pnIv~~~g~~~~--------------~~~~lvmE~~~~g~L~~~l~~~~~l~~~~~~~i~~qi~~gl~ylH~-  125 (277)
T d1xbba_          68 -------PYIVRMIGICEA--------------ESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEE-  125 (277)
T ss_dssp             -------TTBCCEEEEEES--------------SSEEEEEECCTTEEHHHHHHHCTTCCHHHHHHHHHHHHHHHHHHHH-
T ss_pred             -------CCCceEEEEecc--------------CCEEEEEEcCCCCcHHHHHhhccCCCHHHHHHHHHHHHHHHhhHHh-
Confidence                   999999998853              35799999999998766553   48999999999999999999999 


Q ss_pred             CCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecCC--------cEEEeecCCCccccCC-
Q psy9184         416 LEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVGE--------KICYYDLSQDEELFEG-  486 (562)
Q Consensus       416 ~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~~--------g~v~~~l~~~pelF~g-  486 (562)
                      .+|+||||||+|||++.++                    .+||+|||+|+.....        ...++..|++||++.+ 
T Consensus       126 ~~iiHrDlKp~Nill~~~~--------------------~~kl~DFGla~~~~~~~~~~~~~~~~~gt~~y~APE~l~~~  185 (277)
T d1xbba_         126 SNFVHRDLAARNVLLVTQH--------------------YAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYY  185 (277)
T ss_dssp             TTEECSCCSGGGEEEEETT--------------------EEEECCCTTCEECCTTCSEEEC----CCCGGGCCHHHHHHC
T ss_pred             CCcccCCCcchhhcccccC--------------------cccccchhhhhhccccccccccccccCCCceecCchhhcCC
Confidence            7999999999999999887                    8999999999976542        2334667999998765 


Q ss_pred             CCCcHHHHHHHhhcccCCCCC-CCCCCChhhhHHHHHHHHhhcccCCCCCCCchhHHHHHHHHHHHhcCCCcCcCC
Q psy9184         487 EGDYQFDMYRMMRKQCQNNWQ-NFTPKNNVFWIHYLVDKATCLKKGYQYLRAPRHQAFELLEELGQNALHFDSCYE  561 (562)
Q Consensus       487 ~~~~q~dIy~lm~~~~~~~W~-~~~P~tn~~wl~yl~~~Ll~~~~~~~~~~~~~~~~~~~l~~l~~~~l~~~s~~~  561 (562)
                      ..+.++|||+..-... +.+. +..|+.+.. ..-+...+.. +..++.+..-    -..+.+|...++..+...|
T Consensus       186 ~~~~~sDiwS~Gv~l~-ellt~g~~Pf~~~~-~~~~~~~i~~-~~~~~~p~~~----~~~~~~li~~cl~~dp~~R  254 (277)
T d1xbba_         186 KFSSKSDVWSFGVLMW-EAFSYGQKPYRGMK-GSEVTAMLEK-GERMGCPAGC----PREMYDLMNLCWTYDVENR  254 (277)
T ss_dssp             EEEHHHHHHHHHHHHH-HHHTTTCCSSTTCC-HHHHHHHHHT-TCCCCCCTTC----CHHHHHHHHHHTCSSTTTS
T ss_pred             CCCchhhhccchhhhh-HHhhCCCCCCCCCC-HHHHHHHHHc-CCCCCCCccc----CHHHHHHHHHHcCCCHhHC
Confidence            4566799988544332 2332 445554332 1122233333 3333322211    2356667777777776655

>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=3.8e-32  Score=275.66  Aligned_cols=184  Identities=19%  Similarity=0.259  Sum_probs=146.4

Q ss_pred             CCCceeeeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCccccc
Q psy9184         261 SALKNCKKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTEL  334 (562)
Q Consensus       261 ~~y~~~~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~l  334 (562)
                      ++|++++.||+|+||.||+|      +.||||+++...      ..+...+.+.+|+.+|+.++|               
T Consensus         2 d~Y~~~~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~------~~~~~~~~~~~Ei~il~~l~H---------------   60 (298)
T d1gz8a_           2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDT------ETEGVPSTAIREISLLKELNH---------------   60 (298)
T ss_dssp             TTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEC-------------CCHHHHHHHHHHTTCCC---------------
T ss_pred             CCCEeccEEecCcCeEEEEEEECCCCCEEEEEEEehhh------cChHHHHHHHHHHHHHHhCCC---------------
Confidence            57999999999999999999      789999997653      122334678899999999998               


Q ss_pred             ccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCcccc-----ccCCHHHHHHHHHHHHHHH
Q psy9184         335 LKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDI-----KYRSPNQTYAMILQVVFSL  409 (562)
Q Consensus       335 ~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l-----~~l~e~~i~~I~~QIl~aL  409 (562)
                                 ||||+++++|.+             ++.+|+|||||.++ ++..+     ..+++.+++.++.||+.||
T Consensus        61 -----------p~Iv~~~~~~~~-------------~~~~~iv~e~~~~~-~~~~~~~~~~~~l~e~~~~~~~~qil~~L  115 (298)
T d1gz8a_          61 -----------PNIVKLLDVIHT-------------ENKLYLVFEFLHQD-LKKFMDASALTGIPLPLIKSYLFQLLQGL  115 (298)
T ss_dssp             -----------TTBCCEEEEEEE-------------TTEEEEEEECCSEE-HHHHHHHTTTTCCCHHHHHHHHHHHHHHH
T ss_pred             -----------CcEEEecccccc-------------ccceeEEEeecCCc-hhhhhhhhcccCCCHHHHHHHHHHHHHHH
Confidence                       999999999986             56899999999865 33322     2389999999999999999


Q ss_pred             HHHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecC-----CcEEEeecCCCcccc
Q psy9184         410 AVAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVG-----EKICYYDLSQDEELF  484 (562)
Q Consensus       410 ~yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~-----~g~v~~~l~~~pelF  484 (562)
                      .|||+ .|||||||||+|||++.++                    .+||+|||+|+....     ....++..|++||++
T Consensus       116 ~yLH~-~~IiHrDiKpeNIl~~~~~--------------------~~kl~DFG~a~~~~~~~~~~~~~~gt~~y~apE~~  174 (298)
T d1gz8a_         116 AFCHS-HRVLHRDLKPQNLLINTEG--------------------AIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEIL  174 (298)
T ss_dssp             HHHHH-TTCCCSCCCGGGEEECTTS--------------------CEEECSTTHHHHHCCCSBCTTCCBCCCTTCCHHHH
T ss_pred             HHhhc-CCEEccccCchheeecccC--------------------cceeccCCcceeccCCcccceeecccceeeehhhh
Confidence            99999 7999999999999998886                    799999999986643     344678899999987


Q ss_pred             CCCC--CcHHHHHHHhhcccCCCCCCCCCC
Q psy9184         485 EGEG--DYQFDMYRMMRKQCQNNWQNFTPK  512 (562)
Q Consensus       485 ~g~~--~~q~dIy~lm~~~~~~~W~~~~P~  512 (562)
                      ....  ....|||++.-... .+..+..|+
T Consensus       175 ~~~~~~~~~~DiwSlGvily-~m~~G~~Pf  203 (298)
T d1gz8a_         175 LGCKYYSTAVDIWSLGCIFA-EMVTRRALF  203 (298)
T ss_dssp             TTCSSCCTHHHHHHHHHHHH-HHHHSSCSC
T ss_pred             ccccCCCccccccccchhhh-HHhhCCCCC
Confidence            7643  55699988644433 333344454

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=7e-32  Score=269.10  Aligned_cols=226  Identities=19%  Similarity=0.149  Sum_probs=172.1

Q ss_pred             CCCCceeeeeeccCceEEEEE-----eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCccccc
Q psy9184         260 SSALKNCKKIGEGVYGEVFKL-----NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTEL  334 (562)
Q Consensus       260 ~~~y~~~~~LG~GsfG~Vyka-----~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~l  334 (562)
                      .++|++.++||+|+||+||+|     ..||||+++....         ..+++++|+.++++++|               
T Consensus         3 ~~~~~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~l~~~~~---------~~~~~~~Ev~~~~~l~H---------------   58 (258)
T d1k2pa_           3 PKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSM---------SEDEFIEEAKVMMNLSH---------------   58 (258)
T ss_dssp             CCCCCCCCCCCEETTEEEEEEEETTTEEEEEEEEESSSS---------CHHHHHHHHHHHHTCCC---------------
T ss_pred             hHHCEEeEEEecCCCeEEEEEEECCCCEEEEEEECcCcC---------CHHHHHHHHHHHHhcCC---------------
Confidence            367899999999999999999     6899999987531         12578999999999998               


Q ss_pred             ccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc----cCCHHHHHHHHHHHHHHHH
Q psy9184         335 LKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK----YRSPNQTYAMILQVVFSLA  410 (562)
Q Consensus       335 ~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~----~l~e~~i~~I~~QIl~aL~  410 (562)
                                 |||+++++++.+             ++.+|+||||+.+|++...+.    .+++..+..++.||+.||.
T Consensus        59 -----------pnIv~~~g~~~~-------------~~~~~iv~Ey~~~g~l~~~~~~~~~~~~~~~~~~i~~qi~~gl~  114 (258)
T d1k2pa_          59 -----------EKLVQLYGVCTK-------------QRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAME  114 (258)
T ss_dssp             -----------TTBCCEEEEECC-------------SSSEEEEEECCTTEEHHHHHHSGGGCCCHHHHHHHHHHHHHHHH
T ss_pred             -----------CceeeEEEEEee-------------CCceEEEEEccCCCcHHHhhhccccCCcHHHHHHHHHHHHHHHH
Confidence                       999999999875             568999999999998765543    3889999999999999999


Q ss_pred             HHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecC------CcEEEeecCCCcccc
Q psy9184         411 VAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVG------EKICYYDLSQDEELF  484 (562)
Q Consensus       411 yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~------~g~v~~~l~~~pelF  484 (562)
                      |||+ .||+||||||+|||++.++                    .+||+|||+|+....      .+..++..|++||++
T Consensus       115 ~LH~-~~iiH~dlk~~Nill~~~~--------------------~~kl~DfG~a~~~~~~~~~~~~~~~~t~~y~aPE~~  173 (258)
T d1k2pa_         115 YLES-KQFLHRDLAARNCLVNDQG--------------------VVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVL  173 (258)
T ss_dssp             HHHH-TTBCCSCCSGGGEEECTTC--------------------CEEECCCSSCCBCSSSSCCCCCCSCCCGGGCCHHHH
T ss_pred             HHhh-cCcccccccceeEEEcCCC--------------------cEEECcchhheeccCCCceeecccCCCCCcCCcHHh
Confidence            9999 7999999999999999876                    799999999987654      234557778999988


Q ss_pred             CC-CCCcHHHHHHHhhcccCCCCC-CCCCCChhhhHHHHHHHHhhcccCCCCCCCchhHHHHHHHHHHHhcCCCcCcCC
Q psy9184         485 EG-EGDYQFDMYRMMRKQCQNNWQ-NFTPKNNVFWIHYLVDKATCLKKGYQYLRAPRHQAFELLEELGQNALHFDSCYE  561 (562)
Q Consensus       485 ~g-~~~~q~dIy~lm~~~~~~~W~-~~~P~tn~~wl~yl~~~Ll~~~~~~~~~~~~~~~~~~~l~~l~~~~l~~~s~~~  561 (562)
                      .+ ..+...|||+..-... +... +..|+.... ..-+..++.. +.....+...    -..+.+|...+++++...|
T Consensus       174 ~~~~~~~ksDiwS~G~~l~-el~t~g~~Pf~~~~-~~~~~~~i~~-~~~~~~p~~~----~~~l~~li~~cl~~dP~~R  245 (258)
T d1k2pa_         174 MYSKFSSKSDIWAFGVLMW-EIYSLGKMPYERFT-NSETAEHIAQ-GLRLYRPHLA----SEKVYTIMYSCWHEKADER  245 (258)
T ss_dssp             HHCCCCHHHHHHHHHHHHH-HHHTTSCCTTTTSC-HHHHHHHHHT-TCCCCCCTTC----CHHHHHHHHHTTCSSGGGS
T ss_pred             cCCCCCcceeecccchhhH-hHHhcCCCCCCCCC-HHHHHHHHHh-CCCCCCcccc----cHHHHHHHHHHccCCHhHC
Confidence            75 5566799988654443 2221 334543322 1223344444 3333333222    2467888999999887765

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=5.7e-32  Score=274.07  Aligned_cols=184  Identities=18%  Similarity=0.227  Sum_probs=141.9

Q ss_pred             eeeeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCccccccccc
Q psy9184         265 NCKKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTELLKCS  338 (562)
Q Consensus       265 ~~~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~l~~~~  338 (562)
                      .+++||+|+||+||+|      +.||||+++.....   .......+.+.+|+.+|+.++|                   
T Consensus         2 ~l~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~---~~~~~~~~~~~~Ei~il~~l~h-------------------   59 (299)
T d1ua2a_           2 KLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRS---EAKDGINRTALREIKLLQELSH-------------------   59 (299)
T ss_dssp             EEEEEEEETTEEEEEEECSSCCSEEEEEEC---------------CTHHHHHHHHHHHCCC-------------------
T ss_pred             cceEeccCcCeEEEEEEECCCCcEEEEEEEehhhhh---hhhHHHHHHHHHHHHHHHhCCC-------------------
Confidence            4689999999999999      78999999865321   1112223568899999999998                   


Q ss_pred             ccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc---cCCHHHHHHHHHHHHHHHHHHHhh
Q psy9184         339 CVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK---YRSPNQTYAMILQVVFSLAVAEVE  415 (562)
Q Consensus       339 iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~---~l~e~~i~~I~~QIl~aL~yLH~~  415 (562)
                             ||||+++++|.+             ++.+|+|||||.||.+.....   .+++.+++.++.||+.||+|||+ 
T Consensus        60 -------pnIv~~~~~~~~-------------~~~~~ivmE~~~~~~~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~-  118 (299)
T d1ua2a_          60 -------PNIIGLLDAFGH-------------KSNISLVFDFMETDLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLHQ-  118 (299)
T ss_dssp             -------TTBCCEEEEECC-------------TTCCEEEEECCSEEHHHHHTTCCSSCCSSHHHHHHHHHHHHHHHHHH-
T ss_pred             -------CCEeEEEeeecc-------------CCceeehhhhhcchHHhhhhhcccCCCHHHHHHHHHHHHHHHHHhhc-
Confidence                   999999999976             558999999999875544333   38999999999999999999999 


Q ss_pred             CCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecC-----CcEEEeecCCCccccCCC--C
Q psy9184         416 LEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVG-----EKICYYDLSQDEELFEGE--G  488 (562)
Q Consensus       416 ~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~-----~g~v~~~l~~~pelF~g~--~  488 (562)
                      .||+||||||+|||++.++                    .+||+|||+|+....     .+.+++..|++||++.+.  +
T Consensus       119 ~~iiHrDiKp~NIli~~~~--------------------~~KL~DFG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~  178 (299)
T d1ua2a_         119 HWILHRDLKPNNLLLDENG--------------------VLKLADFGLAKSFGSPNRAYTHQVVTRWYRAPELLFGARMY  178 (299)
T ss_dssp             TTCCCCCCCGGGEEECTTC--------------------CEEECCCGGGSTTTSCCCCCCCSCCCCTTCCHHHHTTCSCC
T ss_pred             cceecccCCcceEEecCCC--------------------ccccccCccccccCCCcccccceecChhhccHHHHccCCCC
Confidence            7999999999999999887                    799999999987654     344678899999987653  4


Q ss_pred             CcHHHHHHHhhcccCCCCCCCCCC
Q psy9184         489 DYQFDMYRMMRKQCQNNWQNFTPK  512 (562)
Q Consensus       489 ~~q~dIy~lm~~~~~~~W~~~~P~  512 (562)
                      +...|||++.-... ....+..|+
T Consensus       179 ~~~~DiwSlGvil~-el~~g~~pf  201 (299)
T d1ua2a_         179 GVGVDMWAVGCILA-ELLLRVPFL  201 (299)
T ss_dssp             CHHHHHHHHHHHHH-HHHHSSCSS
T ss_pred             ChhhhhhhcchHHH-HHHhCcCCC
Confidence            66799988644443 233344444

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=4.6e-32  Score=271.66  Aligned_cols=229  Identities=18%  Similarity=0.145  Sum_probs=157.0

Q ss_pred             CCCCCceeeeeeccCceEEEEE---------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCC
Q psy9184         259 PSSALKNCKKIGEGVYGEVFKL---------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTP  329 (562)
Q Consensus       259 ~~~~y~~~~~LG~GsfG~Vyka---------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p  329 (562)
                      +.++|++.+.||+|+||.||+|         ..||||.++...       .....+.+.+|+.++++++|          
T Consensus         5 ~~~~~~l~~~iG~G~fg~Vy~a~~~~~~~~~~~vaik~~~~~~-------~~~~~~~~~~E~~~l~~l~H----------   67 (273)
T d1mp8a_           5 QRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCT-------SDSVREKFLQEALTMRQFDH----------   67 (273)
T ss_dssp             CGGGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTT-------SHHHHHHHHHHHHHHHTCCC----------
T ss_pred             CHHHeEEEEEEeeCCCcEEEEEEEecCCceeEEEEEEEecccc-------CHHHHHHHHHHHHHHHhCCC----------
Confidence            4468999999999999999999         247888876432       24455788999999999998          


Q ss_pred             cccccccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc----cCCHHHHHHHHHHH
Q psy9184         330 CFTELLKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK----YRSPNQTYAMILQV  405 (562)
Q Consensus       330 ~fv~l~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~----~l~e~~i~~I~~QI  405 (562)
                                      |||+++++++.              ++.+|+|||||.+|++...+.    .+++.+++.++.||
T Consensus        68 ----------------pnIv~l~~~~~--------------~~~~~iv~E~~~~g~l~~~~~~~~~~l~~~~~~~~~~qi  117 (273)
T d1mp8a_          68 ----------------PHIVKLIGVIT--------------ENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQL  117 (273)
T ss_dssp             ----------------TTBCCEEEEEC--------------SSSCEEEEECCTTEEHHHHHHHTTTTSCHHHHHHHHHHH
T ss_pred             ----------------CCEeeEEEEEe--------------cCeEEEEEEeccCCcHHhhhhccCCCCCHHHHHHHHHHH
Confidence                            99999999885              346899999999997766543    38999999999999


Q ss_pred             HHHHHHHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecC------CcEEEeecCC
Q psy9184         406 VFSLAVAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVG------EKICYYDLSQ  479 (562)
Q Consensus       406 l~aL~yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~------~g~v~~~l~~  479 (562)
                      +.||.|||+ .+|+||||||+|||++.++                    .+||+|||+|+....      ....++..|+
T Consensus       118 ~~gl~ylH~-~~iiHrDlKp~NIll~~~~--------------------~~Kl~DfG~a~~~~~~~~~~~~~~~gt~~y~  176 (273)
T d1mp8a_         118 STALAYLES-KRFVHRDIAARNVLVSSND--------------------CVKLGDFGLSRYMEDSTYYKASKGKLPIKWM  176 (273)
T ss_dssp             HHHHHHHHH-TTCCCSCCSGGGEEEEETT--------------------EEEECC-------------------CCGGGC
T ss_pred             HHHhhhhcc-cCeeccccchhheeecCCC--------------------cEEEccchhheeccCCcceeccceecCcccc
Confidence            999999999 7999999999999999987                    899999999987653      2334567899


Q ss_pred             CccccCC-CCCcHHHHHHHhhcccCCCCCCCCCCChhhhHHHHHHHHhhcccCCCCCCCchhHHHHHHHHHHHhcCCCcC
Q psy9184         480 DEELFEG-EGDYQFDMYRMMRKQCQNNWQNFTPKNNVFWIHYLVDKATCLKKGYQYLRAPRHQAFELLEELGQNALHFDS  558 (562)
Q Consensus       480 ~pelF~g-~~~~q~dIy~lm~~~~~~~W~~~~P~tn~~wl~yl~~~Ll~~~~~~~~~~~~~~~~~~~l~~l~~~~l~~~s  558 (562)
                      +||++.+ ..+..+|||+..-...+-...+..|+....... +..++.. +..++.+..    .-..+.+|...+|.++.
T Consensus       177 apE~l~~~~~~~~~DiwSlGvil~e~lt~g~~P~~~~~~~~-~~~~i~~-~~~~~~~~~----~~~~~~~li~~cl~~dp  250 (273)
T d1mp8a_         177 APESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNND-VIGRIEN-GERLPMPPN----CPPTLYSLMTKCWAYDP  250 (273)
T ss_dssp             CHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCGGG-HHHHHHT-TCCCCCCTT----CCHHHHHHHHHHTCSSG
T ss_pred             hhhHhccCCCCCccccccchHHHHHHHhcCCCCCCCCCHHH-HHHHHHc-CCCCCCCCC----CCHHHHHHHHHHcCCCH
Confidence            9998875 566679998864433311122344443222111 1222333 222221111    12356667777777766


Q ss_pred             cCC
Q psy9184         559 CYE  561 (562)
Q Consensus       559 ~~~  561 (562)
                      ..|
T Consensus       251 ~~R  253 (273)
T d1mp8a_         251 SRR  253 (273)
T ss_dssp             GGS
T ss_pred             hHC
Confidence            554

>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Proto-oncogene serine/threonine-protein kinase Pim-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=3.8e-32  Score=272.61  Aligned_cols=228  Identities=15%  Similarity=0.076  Sum_probs=167.0

Q ss_pred             CCCceeeeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCccccc
Q psy9184         261 SALKNCKKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTEL  334 (562)
Q Consensus       261 ~~y~~~~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~l  334 (562)
                      ++|++.+.||+|+||.||+|      +.||||++.........  .......+.+|+.+++++++.              
T Consensus         4 ~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~--~~~~~~~~~~E~~il~~l~~~--------------   67 (273)
T d1xwsa_           4 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWG--ELPNGTRVPMEVVLLKKVSSG--------------   67 (273)
T ss_dssp             TTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCCEE--ECTTCCEEEHHHHHHHHHCSS--------------
T ss_pred             CeEEEeEEEeeCCCeEEEEEEECCCCCEEEEEEEehHHccchh--hhhHHHHHHHHHHHHHHhccC--------------
Confidence            67999999999999999999      79999999865321111  011113456899999999840              


Q ss_pred             ccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCc-cccc---cCCHHHHHHHHHHHHHHHH
Q psy9184         335 LKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDS-GDIK---YRSPNQTYAMILQVVFSLA  410 (562)
Q Consensus       335 ~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll-~~l~---~l~e~~i~~I~~QIl~aL~  410 (562)
                                ||||++++++|.+             ++.+|+||||+.++.++ +.+.   .+++.+++.++.||+.||+
T Consensus        68 ----------h~nIv~~~~~~~~-------------~~~~~lv~e~~~~~~~l~~~~~~~~~l~e~~~~~~~~qi~~al~  124 (273)
T d1xwsa_          68 ----------FSGVIRLLDWFER-------------PDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVR  124 (273)
T ss_dssp             ----------SCSBCCEEEEEEC-------------SSEEEEEEECCSSEEEHHHHHHHHCSCCHHHHHHHHHHHHHHHH
T ss_pred             ----------CCCccEEEEEEee-------------CCeEEEEEEeccCcchHHHHHhccCCCCHHHHHHHHHHHHHHHH
Confidence                      4999999999986             56899999999875444 3332   4999999999999999999


Q ss_pred             HHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecC---CcEEEeecCCCccccCCC
Q psy9184         411 VAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVG---EKICYYDLSQDEELFEGE  487 (562)
Q Consensus       411 yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~---~g~v~~~l~~~pelF~g~  487 (562)
                      |||+ .||+||||||+|||++.++.                   .+||+|||+|+....   ....++..|++||++.+.
T Consensus       125 ~lH~-~~iiHrDiKp~NIll~~~~~-------------------~vkl~DFG~a~~~~~~~~~~~~GT~~y~aPE~~~~~  184 (273)
T d1xwsa_         125 HCHN-CGVLHRDIKDENILIDLNRG-------------------ELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYH  184 (273)
T ss_dssp             HHHH-TTEECSCCSGGGEEEETTTT-------------------EEEECCCTTCEECCSSCBCCCCSCGGGSCHHHHHHS
T ss_pred             HHHH-CCCccccCcccceEEecCCC-------------------eEEECccccceecccccccccccCCCcCCHHHHcCC
Confidence            9999 79999999999999986532                   799999999987654   334568899999998765


Q ss_pred             C--CcHHHHHHHhhcccCCCCCCCCCCChhhhHHHHHHHHhhcccCCCCCCCchhHHHHHHHHHHHhcCCCcCcCC
Q psy9184         488 G--DYQFDMYRMMRKQCQNNWQNFTPKNNVFWIHYLVDKATCLKKGYQYLRAPRHQAFELLEELGQNALHFDSCYE  561 (562)
Q Consensus       488 ~--~~q~dIy~lm~~~~~~~W~~~~P~tn~~wl~yl~~~Ll~~~~~~~~~~~~~~~~~~~l~~l~~~~l~~~s~~~  561 (562)
                      .  ....|||++.-. +.....+..|+....       ..+.....++..-      -..+.+|.+++|+++...|
T Consensus       185 ~~~~~~~DiwSlGvi-lyell~g~~Pf~~~~-------~i~~~~~~~~~~~------s~~~~~li~~~L~~dp~~R  246 (273)
T d1xwsa_         185 RYHGRSAAVWSLGIL-LYDMVCGDIPFEHDE-------EIIRGQVFFRQRV------SSECQHLIRWCLALRPSDR  246 (273)
T ss_dssp             CBCHHHHHHHHHHHH-HHHHHHSSCSCCSHH-------HHHHCCCCCSSCC------CHHHHHHHHHHTCSSGGGS
T ss_pred             CCCCcccccccceee-ehhHhhCCCCCCCch-------HHhhcccCCCCCC------CHHHHHHHHHHccCCHhHC
Confidence            3  334899875433 333444555654321       2233133333322      2367778888898887766

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=1.4e-31  Score=270.84  Aligned_cols=225  Identities=20%  Similarity=0.194  Sum_probs=161.7

Q ss_pred             CCCCceeeeeeccCceEEEEE-----eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCccccc
Q psy9184         260 SSALKNCKKIGEGVYGEVFKL-----NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTEL  334 (562)
Q Consensus       260 ~~~y~~~~~LG~GsfG~Vyka-----~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~l  334 (562)
                      .++|++.+.||+|+||+||+|     ..||||+++....         ..+.+.+|+.+++.++|               
T Consensus        16 ~~~~~i~~~iG~G~fg~Vy~~~~~~~~~vAiK~l~~~~~---------~~~~~~~E~~~l~~l~h---------------   71 (285)
T d1fmka3          16 RESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTM---------SPEAFLQEAQVMKKLRH---------------   71 (285)
T ss_dssp             GGGEEEEEEEEECSSCEEEEEEETTTEEEEEEECCTTSS---------CHHHHHHHHHHHHHCCC---------------
T ss_pred             HHHEEEeeEEeeCCCeEEEEEEECCCCEEEEEEECcccC---------CHHHHHHHHHHHHhccc---------------
Confidence            367999999999999999999     6899999975431         12568899999999998               


Q ss_pred             ccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc-----cCCHHHHHHHHHHHHHHH
Q psy9184         335 LKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK-----YRSPNQTYAMILQVVFSL  409 (562)
Q Consensus       335 ~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~-----~l~e~~i~~I~~QIl~aL  409 (562)
                                 ||||++++++.              ++.+|+|||||.+|++...+.     .+++.++..++.||+.||
T Consensus        72 -----------~nIv~~~g~~~--------------~~~~~lv~Ey~~~g~l~~~~~~~~~~~l~~~~~~~i~~~i~~gl  126 (285)
T d1fmka3          72 -----------EKLVQLYAVVS--------------EEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGM  126 (285)
T ss_dssp             -----------TTBCCEEEEEC--------------SSSCEEEECCCTTCBHHHHHSHHHHTTCCHHHHHHHHHHHHHHH
T ss_pred             -----------CCEeEEEEEEe--------------cCCeEEEEEecCCCchhhhhhhcccccchHHHHHHHHHHHHHHH
Confidence                       99999999874              346799999999998766553     389999999999999999


Q ss_pred             HHHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecC------CcEEEeecCCCccc
Q psy9184         410 AVAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVG------EKICYYDLSQDEEL  483 (562)
Q Consensus       410 ~yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~------~g~v~~~l~~~pel  483 (562)
                      +|||+ .+|+||||||+||||+.++                    .+||+|||+|+....      ....++..|++||.
T Consensus       127 ~~LH~-~~ivH~DlKp~NIll~~~~--------------------~~kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~  185 (285)
T d1fmka3         127 AYVER-MNYVHRDLRAANILVGENL--------------------VCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEA  185 (285)
T ss_dssp             HHHHH-TTCCCSCCSGGGEEECGGG--------------------CEEECCCCTTC--------------CCGGGSCHHH
T ss_pred             HHHhh-hheecccccceEEEECCCC--------------------cEEEcccchhhhccCCCceeeccccccccccChHH
Confidence            99999 7999999999999999886                    799999999987643      23456788999998


Q ss_pred             cCC-CCCcHHHHHHHhhcccCCCCC-CCCCCChhhhHHHHHHHHhhcccCCCCCCCchhHHHHHHHHHHHhcCCCcCcCC
Q psy9184         484 FEG-EGDYQFDMYRMMRKQCQNNWQ-NFTPKNNVFWIHYLVDKATCLKKGYQYLRAPRHQAFELLEELGQNALHFDSCYE  561 (562)
Q Consensus       484 F~g-~~~~q~dIy~lm~~~~~~~W~-~~~P~tn~~wl~yl~~~Ll~~~~~~~~~~~~~~~~~~~l~~l~~~~l~~~s~~~  561 (562)
                      +.+ ..+..+|||+..-... +... +..|+.+.. ..-+...+.. +..++.+..    .-+.+.+|+..+|.++...|
T Consensus       186 ~~~~~~~~ksDI~S~Giil~-el~t~~~p~~~~~~-~~~~~~~i~~-~~~~~~~~~----~~~~l~~li~~cl~~dP~~R  258 (285)
T d1fmka3         186 ALYGRFTIKSDVWSFGILLT-ELTTKGRVPYPGMV-NREVLDQVER-GYRMPCPPE----CPESLHDLMCQCWRKEPEER  258 (285)
T ss_dssp             HHHCCCCHHHHHHHHHHHHH-HHHTTTCCSSTTCC-HHHHHHHHHT-TCCCCCCTT----SCHHHHHHHHHHTCSSGGGS
T ss_pred             HhCCCCCcHHhhhcchHHHH-HHHhCCCCCCCCCC-HHHHHHHHHh-cCCCCCCcc----cCHHHHHHHHHHcccCHhHC
Confidence            765 5566799998644443 2111 222222222 1222232333 222222211    12356677788887776655

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=8.8e-32  Score=270.41  Aligned_cols=230  Identities=15%  Similarity=0.092  Sum_probs=163.3

Q ss_pred             CCCCceeeeeeccCceEEEEE---------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCc
Q psy9184         260 SSALKNCKKIGEGVYGEVFKL---------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPC  330 (562)
Q Consensus       260 ~~~y~~~~~LG~GsfG~Vyka---------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~  330 (562)
                      ..+|++.+.||+|+||+||+|         ..||||++....     .......+.+.+|+.+|+.++|           
T Consensus         7 ~~d~~~~~~iG~G~fg~Vy~~~~~~~~~~~~~vAiK~l~~~~-----~~~~~~~~~~~~Ei~~l~~l~H-----------   70 (273)
T d1u46a_           7 EKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDV-----LSQPEAMDDFIREVNAMHSLDH-----------   70 (273)
T ss_dssp             GGGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC-------------CHHHHHHHHHHHHHHHCCC-----------
T ss_pred             hHHeEEEEEEecCCCeEEEEEEEECCCCcEEEEEEEEEChhh-----cCCHHHHHHHHHHHHHHHhCCC-----------
Confidence            367999999999999999999         368999987653     2234455789999999999988           


Q ss_pred             ccccccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc----cCCHHHHHHHHHHHH
Q psy9184         331 FTELLKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK----YRSPNQTYAMILQVV  406 (562)
Q Consensus       331 fv~l~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~----~l~e~~i~~I~~QIl  406 (562)
                                     |||+++++++.+              +.+++|||||++|++.+.+.    .+++..+..++.||+
T Consensus        71 ---------------~nIv~~~g~~~~--------------~~~~lv~e~~~~~~l~~~~~~~~~~l~~~~~~~~~~qi~  121 (273)
T d1u46a_          71 ---------------RNLIRLYGVVLT--------------PPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVA  121 (273)
T ss_dssp             ---------------TTBCCEEEEECS--------------SSCEEEEECCTTCBHHHHHHHHGGGSCHHHHHHHHHHHH
T ss_pred             ---------------CCEEEEEEEEee--------------cchheeeeeecCcchhhhhhcccCCCCHHHHHHHHHHHH
Confidence                           999999998863              35799999999998776653    499999999999999


Q ss_pred             HHHHHHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecCC--------cEEEeecC
Q psy9184         407 FSLAVAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVGE--------KICYYDLS  478 (562)
Q Consensus       407 ~aL~yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~~--------g~v~~~l~  478 (562)
                      .||.|||+ .+|+||||||+|||++.++                    .+||+|||+|+.....        ...++..|
T Consensus       122 ~gl~ylH~-~~iiHrDikp~NIll~~~~--------------------~vkl~DfGl~~~~~~~~~~~~~~~~~~~~~~~  180 (273)
T d1u46a_         122 EGMGYLES-KRFIHRDLAARNLLLATRD--------------------LVKIGDFGLMRALPQNDDHYVMQEHRKVPFAW  180 (273)
T ss_dssp             HHHHHHHH-TTEECSCCCGGGEEEEETT--------------------EEEECCCTTCEECCC-CCEEEC-----CCGGG
T ss_pred             HHHHHhhh-CCEeeeeecHHHhcccccc--------------------ceeeccchhhhhcccCCCcceecCccccCccc
Confidence            99999999 7999999999999999986                    8999999999987542        22335568


Q ss_pred             CCccccCCC-CCcHHHHHHHhhcccCCCCC-CCCCCChhhhHHHHHHHHhhcccCCCCCCCchhHHHHHHHHHHHhcCCC
Q psy9184         479 QDEELFEGE-GDYQFDMYRMMRKQCQNNWQ-NFTPKNNVFWIHYLVDKATCLKKGYQYLRAPRHQAFELLEELGQNALHF  556 (562)
Q Consensus       479 ~~pelF~g~-~~~q~dIy~lm~~~~~~~W~-~~~P~tn~~wl~yl~~~Ll~~~~~~~~~~~~~~~~~~~l~~l~~~~l~~  556 (562)
                      ++||++.+. .+...|||+..-... +.+. +..|+........+ ..+...+..++.+..-    -..+.+|...++.+
T Consensus       181 ~aPE~~~~~~~~~~~Di~S~Gvil~-emlt~G~~Pf~~~~~~~~~-~~i~~~~~~~~~~~~~----~~~l~~li~~cl~~  254 (273)
T d1u46a_         181 CAPESLKTRTFSHASDTWMFGVTLW-EMFTYGQEPWIGLNGSQIL-HKIDKEGERLPRPEDC----PQDIYNVMVQCWAH  254 (273)
T ss_dssp             CCHHHHHHCEEEHHHHHHHHHHHHH-HHHTTSCCTTTTCCHHHHH-HHHHTSCCCCCCCTTC----CHHHHHHHHHHTCS
T ss_pred             CCHHHHhCCCCCcchhhhhhHHHHH-HHHhCCCCCCCCcCHHHHH-HHHHhCCCCCCCcccc----cHHHHHHHHHHcCC
Confidence            899987764 455599988544332 3333 46676554434433 3444323333322211    24677888888888


Q ss_pred             cCcCC
Q psy9184         557 DSCYE  561 (562)
Q Consensus       557 ~s~~~  561 (562)
                      +...|
T Consensus       255 dp~~R  259 (273)
T d1u46a_         255 KPEDR  259 (273)
T ss_dssp             SGGGS
T ss_pred             ChhHC
Confidence            77655

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.97  E-value=1.7e-31  Score=271.41  Aligned_cols=231  Identities=18%  Similarity=0.122  Sum_probs=171.7

Q ss_pred             CCCCCCceeeeeeccCceEEEEE-----------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCC
Q psy9184         258 YPSSALKNCKKIGEGVYGEVFKL-----------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTEN  326 (562)
Q Consensus       258 ~~~~~y~~~~~LG~GsfG~Vyka-----------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n  326 (562)
                      +|.++|++++.||+|+||.||+|           ..||||++....       .....+++.+|+.+++.++|       
T Consensus        10 ~p~~~~~~~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~i~~~~-------~~~~~~~~~~E~~il~~l~h-------   75 (301)
T d1lufa_          10 YPRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEA-------SADMQADFQREAALMAEFDN-------   75 (301)
T ss_dssp             CCGGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTC-------CHHHHHHHHHHHHHHHTCCC-------
T ss_pred             CCHHHcEEeEEEeeCCCeEEEEEEECCCccCCCCeEEEEEEEChhc-------ChHHHHHHHHHHHHHHhcCC-------
Confidence            46678999999999999999999           479999987643       23445688999999999998       


Q ss_pred             CCCcccccccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc---------------
Q psy9184         327 STPCFTELLKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK---------------  391 (562)
Q Consensus       327 ~~p~fv~l~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~---------------  391 (562)
                                         |||+++++++..             .+.++++|||+.+|++.+.+.               
T Consensus        76 -------------------~niv~~~~~~~~-------------~~~~~~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~  123 (301)
T d1lufa_          76 -------------------PNIVKLLGVCAV-------------GKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDL  123 (301)
T ss_dssp             -------------------TTBCCEEEEECS-------------SSSCEEEEECCTTCBHHHHHHHTCC-----------
T ss_pred             -------------------CCcccceeeecc-------------CCceEEEEEecCCCcHHHHHHhcCcccccccccccc
Confidence                               999999998875             558999999999998766552               


Q ss_pred             ------------cCCHHHHHHHHHHHHHHHHHHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEE
Q psy9184         392 ------------YRSPNQTYAMILQVVFSLAVAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTII  459 (562)
Q Consensus       392 ------------~l~e~~i~~I~~QIl~aL~yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~  459 (562)
                                  .+++.++..|+.||+.||+|||+ .+||||||||+|||++.++                    .+||+
T Consensus       124 ~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~ylH~-~~ivHrDlKp~NILld~~~--------------------~~Kl~  182 (301)
T d1lufa_         124 STRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSE-RKFVHRDLATRNCLVGENM--------------------VVKIA  182 (301)
T ss_dssp             -----------CCCCHHHHHHHHHHHHHHHHHHHH-TTCCCSCCSGGGEEECGGG--------------------CEEEC
T ss_pred             chhhhccccCCCCCCHHHHHHHHHHHHHHhhhccc-CCeEeeEEcccceEECCCC--------------------cEEEc
Confidence                        27888999999999999999999 7999999999999999876                    79999


Q ss_pred             eccceeeecC-------CcEEEeecCCCccccCC-CCCcHHHHHHHhhcccCCCCCCCCCCChhhhHHHHHHHHhhcccC
Q psy9184         460 DFTISRCFVG-------EKICYYDLSQDEELFEG-EGDYQFDMYRMMRKQCQNNWQNFTPKNNVFWIHYLVDKATCLKKG  531 (562)
Q Consensus       460 DFGLSr~~~~-------~g~v~~~l~~~pelF~g-~~~~q~dIy~lm~~~~~~~W~~~~P~tn~~wl~yl~~~Ll~~~~~  531 (562)
                      |||+|+....       ....++..|++||.+.+ ..+.++|||+..-...+-.+....|+.... -.-+...+.. +..
T Consensus       183 DFGls~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~t~ksDVwS~Gvvl~ell~~~~~p~~~~~-~~e~~~~v~~-~~~  260 (301)
T d1lufa_         183 DFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYGMA-HEEVIYYVRD-GNI  260 (301)
T ss_dssp             CCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSC-HHHHHHHHHT-TCC
T ss_pred             cchhheeccCCccccccCCCCcCcCcCCHHHHccCCCChhhhhccchhhHHHHHccCCCCCCCCC-HHHHHHHHHc-CCC
Confidence            9999986543       12334667999998877 466679998854443322222334554332 3333444444 333


Q ss_pred             CCCCCCchhHHHHHHHHHHHhcCCCcCcCC
Q psy9184         532 YQYLRAPRHQAFELLEELGQNALHFDSCYE  561 (562)
Q Consensus       532 ~~~~~~~~~~~~~~l~~l~~~~l~~~s~~~  561 (562)
                      ++.+..    ....+.+|...++.++...|
T Consensus       261 ~~~p~~----~~~~~~~li~~cl~~~P~~R  286 (301)
T d1lufa_         261 LACPEN----CPLELYNLMRLCWSKLPADR  286 (301)
T ss_dssp             CCCCTT----CCHHHHHHHHHHTCSSGGGS
T ss_pred             CCCCcc----chHHHHHHHHHHcCCChhHC
Confidence            222221    12356677888888776654

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=3.9e-31  Score=270.81  Aligned_cols=172  Identities=20%  Similarity=0.178  Sum_probs=140.5

Q ss_pred             CCCCCceeeeeeccCceEEEEE----------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCC
Q psy9184         259 PSSALKNCKKIGEGVYGEVFKL----------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENST  328 (562)
Q Consensus       259 ~~~~y~~~~~LG~GsfG~Vyka----------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~  328 (562)
                      ...+|+++++||+|+||+||+|          ..||+|.+....       ..+..+.+.+|+.++++++|         
T Consensus         7 k~~dy~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~vavK~~~~~~-------~~~~~~~~~~E~~~l~~l~H---------   70 (317)
T d1xkka_           7 KETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREAT-------SPKANKEILDEAYVMASVDN---------   70 (317)
T ss_dssp             CTTTEEEEEEEEECSSEEEEEEEECC----CCEEEEEEEECC-----------CTHHHHHHHHHHHHHCCC---------
T ss_pred             CHHHCEEeeEEecCCCeEEEEEEEcCCCCEEEEEEEEEEecccc-------CHHHHHHHHHHHHHHHhCCC---------
Confidence            3467999999999999999999          258889886432       23345678999999999998         


Q ss_pred             CcccccccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc----cCCHHHHHHHHHH
Q psy9184         329 PCFTELLKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK----YRSPNQTYAMILQ  404 (562)
Q Consensus       329 p~fv~l~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~----~l~e~~i~~I~~Q  404 (562)
                                       ||||++++++.+              +..+++||++.+|++++.+.    .+++..++.++.|
T Consensus        71 -----------------pnIv~l~g~~~~--------------~~~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~q  119 (317)
T d1xkka_          71 -----------------PHVCRLLGICLT--------------STVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ  119 (317)
T ss_dssp             -----------------TTBCCEEEEEES--------------SSEEEEEECCTTCBHHHHHHHTSSSCCHHHHHHHHHH
T ss_pred             -----------------CCEeeEEEEEec--------------CCeeEEEEeccCCcccccccccccCCCHHHHHHHHHH
Confidence                             999999998863              36789999999998877553    4899999999999


Q ss_pred             HHHHHHHHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecC-------CcEEEeec
Q psy9184         405 VVFSLAVAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVG-------EKICYYDL  477 (562)
Q Consensus       405 Il~aL~yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~-------~g~v~~~l  477 (562)
                      |+.||+|||+ ++|+||||||+|||++.++                    .+||+|||+|+....       .+..++..
T Consensus       120 i~~gl~yLH~-~~iiHrDlKp~NIll~~~~--------------------~~kl~DFGla~~~~~~~~~~~~~~~~gt~~  178 (317)
T d1xkka_         120 IAKGMNYLED-RRLVHRDLAARNVLVKTPQ--------------------HVKITDFGLAKLLGAEEKEYHAEGGKVPIK  178 (317)
T ss_dssp             HHHHHHHHHH-TTCCCSCCCGGGEEEEETT--------------------EEEECCCSHHHHTTTTCC--------CCTT
T ss_pred             HHHHHHHHHH-cCcccCcchhhcceeCCCC--------------------CeEeeccccceecccccccccccccccCcc
Confidence            9999999999 7999999999999999886                    899999999987643       22345778


Q ss_pred             CCCccccCC-CCCcHHHHHHHh
Q psy9184         478 SQDEELFEG-EGDYQFDMYRMM  498 (562)
Q Consensus       478 ~~~pelF~g-~~~~q~dIy~lm  498 (562)
                      |++||++.+ ..+..+|||+..
T Consensus       179 y~APE~l~~~~~~~~sDvwS~G  200 (317)
T d1xkka_         179 WMALESILHRIYTHQSDVWSYG  200 (317)
T ss_dssp             TSCHHHHHHCCCCHHHHHHHHH
T ss_pred             ccChHHHhcCCCChhhhhhhHH
Confidence            999997765 456679998853

>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: (Plasmodium falciparum) [TaxId: 5833]

Probab=99.97  E-value=1.2e-30  Score=262.38  Aligned_cols=174  Identities=20%  Similarity=0.278  Sum_probs=142.2

Q ss_pred             CCCceeeeeeccCceEEEEE-----eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCcccccc
Q psy9184         261 SALKNCKKIGEGVYGEVFKL-----NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTELL  335 (562)
Q Consensus       261 ~~y~~~~~LG~GsfG~Vyka-----~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~l~  335 (562)
                      ++|+++++||+|+||+||+|     +.||||++....      ......+.+.+|+.+|++++|                
T Consensus         2 ~~Y~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~i~~~~------~~~~~~~~~~~E~~il~~l~h----------------   59 (286)
T d1ob3a_           2 EKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEK------EDEGIPSTTIREISILKELKH----------------   59 (286)
T ss_dssp             CSEEEEEEEEEETTEEEEEEEETTSCEEEEEEECCSS------GGGCCCHHHHHHHHGGGGCCC----------------
T ss_pred             CCceeccEEecCCCcEEEEEEeCCCCEEEEEEEehhh------cChHHHHHHHHHHHHHHhCCC----------------
Confidence            57999999999999999999     789999997653      122334678899999999998                


Q ss_pred             cccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCcccc---ccCCHHHHHHHHHHHHHHHHHH
Q psy9184         336 KCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDI---KYRSPNQTYAMILQVVFSLAVA  412 (562)
Q Consensus       336 ~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l---~~l~e~~i~~I~~QIl~aL~yL  412 (562)
                                |||+++++.|..             ++..|++||++.++.+....   ..+++.+++.++.||+.||.||
T Consensus        60 ----------pnIv~~~~~~~~-------------~~~~~i~~e~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~L  116 (286)
T d1ob3a_          60 ----------SNIVKLYDVIHT-------------KKRLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYC  116 (286)
T ss_dssp             ----------TTBCCEEEEEEC-------------SSCEEEEEECCSEEHHHHHHTSTTCCCHHHHHHHHHHHHHHHHHH
T ss_pred             ----------CcEEeeeeeccc-------------CCceeEEEEeehhhhHHHHHhhcCCcchhhhHHHHHHHHHHHHHh
Confidence                      999999999975             56899999999876433222   2489999999999999999999


Q ss_pred             HhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecC-----CcEEEeecCCCccccCCC
Q psy9184         413 EVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVG-----EKICYYDLSQDEELFEGE  487 (562)
Q Consensus       413 H~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~-----~g~v~~~l~~~pelF~g~  487 (562)
                      |+ ++|+||||||+|||++.++                    .+||+|||+|.....     ...+.+..|.+||.+.+.
T Consensus       117 H~-~~IvHrDiKp~NIll~~~~--------------------~~kl~DfG~a~~~~~~~~~~~~~~~~~~y~~pE~~~~~  175 (286)
T d1ob3a_         117 HD-RRVLHRDLKPQNLLINREG--------------------ELKIADFGLARAFGIPVRKYTHEIVTLWYRAPDVLMGS  175 (286)
T ss_dssp             HH-TTCCCSCCCGGGEEECTTS--------------------CEEECCTTHHHHHCC---------CCCTTCCHHHHTTC
T ss_pred             cc-CcEEecCCCCceeeEcCCC--------------------CEEecccccceecccCccccceecccchhhhHHHHhCC
Confidence            99 7999999999999999887                    799999999977553     233457778999988764


Q ss_pred             --CCcHHHHHHHhhc
Q psy9184         488 --GDYQFDMYRMMRK  500 (562)
Q Consensus       488 --~~~q~dIy~lm~~  500 (562)
                        .+...|||++.-.
T Consensus       176 ~~~~~~~DiwslGv~  190 (286)
T d1ob3a_         176 KKYSTTIDIWSVGCI  190 (286)
T ss_dssp             CSCCTHHHHHHHHHH
T ss_pred             CCCCcceeehhcCcH
Confidence              4567999886433

>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=1.1e-30  Score=264.55  Aligned_cols=243  Identities=17%  Similarity=0.200  Sum_probs=168.2

Q ss_pred             CCCceeeeeeccCceEEEEE-------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCcccc
Q psy9184         261 SALKNCKKIGEGVYGEVFKL-------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTE  333 (562)
Q Consensus       261 ~~y~~~~~LG~GsfG~Vyka-------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~  333 (562)
                      ++|+++++||+|+||+||+|       +.||||+++.....      ......+.+|+.+++.|+...            
T Consensus         7 ~~Y~i~~~LG~G~fg~V~~a~~~~~~~~~vAiK~i~~~~~~------~~~~~~~~~E~~~l~~l~~~~------------   68 (305)
T d1blxa_           7 QQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGE------EGMPLSTIREVAVLRHLETFE------------   68 (305)
T ss_dssp             GTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCT------TSCBCTHHHHHHHHHHHHHTC------------
T ss_pred             CCEEEEEEEecccCeEEEEEEEECCCCEEEEEEEEehhhcc------chHHHHHHHHHHHHHHHhhcC------------
Confidence            68999999999999999999       57999999865321      111134567888887773100            


Q ss_pred             cccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCcccc----ccCCHHHHHHHHHHHHHHH
Q psy9184         334 LLKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDI----KYRSPNQTYAMILQVVFSL  409 (562)
Q Consensus       334 l~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l----~~l~e~~i~~I~~QIl~aL  409 (562)
                                 ||||++++++|....        ......+|++||||.+|.+....    ..+++..++.++.||+.||
T Consensus        69 -----------HpnIv~~~~~~~~~~--------~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL  129 (305)
T d1blxa_          69 -----------HPNVVRLFDVCTVSR--------TDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGL  129 (305)
T ss_dssp             -----------CTTBCCEEEEEEEEE--------CSSEEEEEEEEECCSCBHHHHHHHSCTTCSCHHHHHHHHHHHHHHH
T ss_pred             -----------CCCcceeeeeecccc--------cccCceEEEEEEeccCCchhhhhhccCCCCCHHHHHHHHHHHHHHH
Confidence                       399999999886422        11245799999999987542221    2389999999999999999


Q ss_pred             HHHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecC----CcEEEeecCCCccccC
Q psy9184         410 AVAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVG----EKICYYDLSQDEELFE  485 (562)
Q Consensus       410 ~yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~----~g~v~~~l~~~pelF~  485 (562)
                      +|||+ ++|+||||||+|||++..+                    .+||+|||+++....    ....++..|++||++.
T Consensus       130 ~yLH~-~~ivHrDiKp~NILi~~~~--------------------~~kl~dfg~~~~~~~~~~~~~~~gT~~Y~APE~~~  188 (305)
T d1blxa_         130 DFLHS-HRVVHRDLKPQNILVTSSG--------------------QIKLADFGLARIYSFQMALTSVVVTLWYRAPEVLL  188 (305)
T ss_dssp             HHHHH-TTCCCCCCCGGGEEECTTC--------------------CEEECSCCSCCCCCGGGGGCCCCCCCTTCCHHHHT
T ss_pred             HHHHh-CCEEecCCCccEEEEcCCC--------------------CeeecchhhhhhhcccccCCCcccChhhcCcchhc
Confidence            99999 7999999999999999887                    799999999987643    3456789999999887


Q ss_pred             C-CCCcHHHHHHHhhcccCCCCCCCCCCC---hhhhHHHHHHHHhhc-ccCCC-----------CCCCc-hhH----HHH
Q psy9184         486 G-EGDYQFDMYRMMRKQCQNNWQNFTPKN---NVFWIHYLVDKATCL-KKGYQ-----------YLRAP-RHQ----AFE  544 (562)
Q Consensus       486 g-~~~~q~dIy~lm~~~~~~~W~~~~P~t---n~~wl~yl~~~Ll~~-~~~~~-----------~~~~~-~~~----~~~  544 (562)
                      + .++...|||++.-... ....+..|+.   ...-+..+...+... ...++           ..... ..+    .-.
T Consensus       189 ~~~y~~~~DiwSlG~il~-ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~  267 (305)
T d1blxa_         189 QSSYATPVDLWSVGCIFA-EMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDE  267 (305)
T ss_dssp             TCCCCTHHHHHHHHHHHH-HHHHSSCSCCCSSHHHHHHHHHHHHCCCCGGGSCTTCSSCGGGSCCCCCCCGGGTCCSCCH
T ss_pred             CCCCChhehhhchHHHHH-HHHHCCCCCCCCCHHHHHHHHHHhhCCCchhcccccccchhhhhccccccchhhccccCCH
Confidence            6 5677899988644333 3444555553   222233333322110 00010           00000 000    134


Q ss_pred             HHHHHHHhcCCCcCcCCC
Q psy9184         545 LLEELGQNALHFDSCYEM  562 (562)
Q Consensus       545 ~l~~l~~~~l~~~s~~~~  562 (562)
                      .+.+|..+||+++...|+
T Consensus       268 ~~~dli~~mL~~dP~~R~  285 (305)
T d1blxa_         268 LGKDLLLKCLTFNPAKRI  285 (305)
T ss_dssp             HHHHHHHHHSCSSTTTSC
T ss_pred             HHHHHHHHHCcCChhHCc
Confidence            677889999999988764

>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38-gamma
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=3.1e-30  Score=266.49  Aligned_cols=180  Identities=16%  Similarity=0.252  Sum_probs=141.7

Q ss_pred             CCCCceeeeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCcccc
Q psy9184         260 SSALKNCKKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTE  333 (562)
Q Consensus       260 ~~~y~~~~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~  333 (562)
                      .++|+++++||+|+||.||+|      +.||||++....      ......+.+.+|+.+|+.++|              
T Consensus        17 ~~~Y~~i~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~------~~~~~~~~~~~Ei~il~~l~h--------------   76 (346)
T d1cm8a_          17 RAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPF------QSELFAKRAYRELRLLKHMRH--------------   76 (346)
T ss_dssp             BSSEEEEEEC------CEEEEEETTTCCEEEEEECSSTT------SSHHHHHHHHHHHHHHHHCCB--------------
T ss_pred             CCcEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEchhh------cChHHHHHHHHHHHHHHhcCC--------------
Confidence            368999999999999999999      889999998643      234556788999999999998              


Q ss_pred             cccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc---cCCHHHHHHHHHHHHHHHH
Q psy9184         334 LLKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK---YRSPNQTYAMILQVVFSLA  410 (562)
Q Consensus       334 l~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~---~l~e~~i~~I~~QIl~aL~  410 (562)
                                  ||||+++++|....       .......+|+|||||  |.++..+.   .+++..++.++.||+.||.
T Consensus        77 ------------pniv~l~~~~~~~~-------~~~~~~~~~lv~e~~--~~~l~~~~~~~~l~~~~~~~~~~qi~~aL~  135 (346)
T d1cm8a_          77 ------------ENVIGLLDVFTPDE-------TLDDFTDFYLVMPFM--GTDLGKLMKHEKLGEDRIQFLVYQMLKGLR  135 (346)
T ss_dssp             ------------TTBCCCSEEECSCS-------STTTCCCCEEEEECC--SEEHHHHHHHCCCCHHHHHHHHHHHHHHHH
T ss_pred             ------------CCeeEEEEEeccCc-------cccccceEEEEEecc--cccHHHHHHhccccHHHHHHHHHHHHHHHH
Confidence                        99999999887532       112344689999999  44554443   4999999999999999999


Q ss_pred             HHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecC--CcEEEeecCCCccccCCC-
Q psy9184         411 VAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVG--EKICYYDLSQDEELFEGE-  487 (562)
Q Consensus       411 yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~--~g~v~~~l~~~pelF~g~-  487 (562)
                      |||+ +||+||||||+|||++.++                    .+||+|||+|+....  .+.+++..|++||++.+. 
T Consensus       136 ~LH~-~~IiHrDiKp~NIL~~~~~--------------------~~kl~Dfg~a~~~~~~~~~~~~t~~y~aPE~~~~~~  194 (346)
T d1cm8a_         136 YIHA-AGIIHRDLKPGNLAVNEDC--------------------ELKILDFGLARQADSEMTGYVVTRWYRAPEVILNWM  194 (346)
T ss_dssp             HHHH-TTEECCCCCGGGEEECTTC--------------------CEEECCCTTCEECCSSCCSSCSCGGGCCTHHHHTTT
T ss_pred             HHHh-CCCcccccCcchhhccccc--------------------ccccccccceeccCCccccccccccccCHHHHcCCC
Confidence            9999 7999999999999999887                    799999999998765  455678889999988663 


Q ss_pred             -CCcHHHHHHHhhcc
Q psy9184         488 -GDYQFDMYRMMRKQ  501 (562)
Q Consensus       488 -~~~q~dIy~lm~~~  501 (562)
                       .+...|||++.-..
T Consensus       195 ~~~~~~DiwSlGvil  209 (346)
T d1cm8a_         195 RYTQTVDIWSVGCIM  209 (346)
T ss_dssp             CCCTTHHHHHHHHHH
T ss_pred             CCCccchhhcchHHH
Confidence             45669998864443

>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase Erk2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=4.6e-30  Score=265.60  Aligned_cols=189  Identities=18%  Similarity=0.197  Sum_probs=143.9

Q ss_pred             CCCCceeeeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCcccc
Q psy9184         260 SSALKNCKKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTE  333 (562)
Q Consensus       260 ~~~y~~~~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~  333 (562)
                      .++|+++++||+|+||+||+|      +.||||++....       .....+.+.+|+.+|+.|+|              
T Consensus         7 ~~rY~~~~~LG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~-------~~~~~~~~~~Ei~il~~l~h--------------   65 (345)
T d1pmea_           7 GPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFE-------HQTYCQRTLREIKILLRFRH--------------   65 (345)
T ss_dssp             CTTEEEEEECC---CCCEEEEEETTTCSEEEEEEECCTT-------CHHHHHHHHHHHHHHHHCCC--------------
T ss_pred             CCCeEEEEEEeeccCeEEEEEEECCCCcEEEEEEEehhc-------ChHHHHHHHHHHHHHHHcCC--------------
Confidence            367999999999999999999      889999997542       24445688999999999998              


Q ss_pred             cccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc--cCCHHHHHHHHHHHHHHHHH
Q psy9184         334 LLKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK--YRSPNQTYAMILQVVFSLAV  411 (562)
Q Consensus       334 l~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~--~l~e~~i~~I~~QIl~aL~y  411 (562)
                                  |||+++++++..        +.......+|++| ++.||++.+.+.  .+++.+++.++.||+.||+|
T Consensus        66 ------------p~iv~~~~~~~~--------~~~~~~~~~~l~~-~~~~g~L~~~l~~~~l~~~~i~~i~~qil~al~y  124 (345)
T d1pmea_          66 ------------ENIIGINDIIRA--------PTIEQMKDVYLVT-HLMGADLYKLLKTQHLSNDHICYFLYQILRGLKY  124 (345)
T ss_dssp             ------------TTBCCCCEEECC--------SSTTTCCCEEEEE-ECCCEEHHHHHHHCCCCHHHHHHHHHHHHHHHHH
T ss_pred             ------------CCCCcEEEEEee--------ccccccceEEEEE-eecCCchhhhhhcCCCCHHHHHHHHHHHHHHHHH
Confidence                        899999888864        2222233455555 556787776654  59999999999999999999


Q ss_pred             HHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecC--------CcEEEeecCCCccc
Q psy9184         412 AEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVG--------EKICYYDLSQDEEL  483 (562)
Q Consensus       412 LH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~--------~g~v~~~l~~~pel  483 (562)
                      ||+ +|||||||||+|||++.++                    .+||+|||+|+....        ...+++..|++||+
T Consensus       125 LH~-~~iiHRDIKp~NILl~~~~--------------------~~kl~DfG~a~~~~~~~~~~~~~~~~~gt~~y~aPE~  183 (345)
T d1pmea_         125 IHS-ANVLHRDLKPSNLLLNTTC--------------------DLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEI  183 (345)
T ss_dssp             HHH-TTEECCCCCGGGEEECTTC--------------------CEEECCCTTCEECCGGGCBCCTTCCCCSCGGGCCGGG
T ss_pred             HHH-CCCcCCCCCcceEEECCCC--------------------CEEEcccCceeeccCCCccceeeccccccceechHHH
Confidence            999 7999999999999999876                    799999999987643        34456788999998


Q ss_pred             cCCC--CCcHHHHHHHhhcccCCCCCCCCCC
Q psy9184         484 FEGE--GDYQFDMYRMMRKQCQNNWQNFTPK  512 (562)
Q Consensus       484 F~g~--~~~q~dIy~lm~~~~~~~W~~~~P~  512 (562)
                      +...  +....|||++.-... .++.+..|+
T Consensus       184 l~~~~~~~~~~DiwSlG~il~-eml~g~~pf  213 (345)
T d1pmea_         184 MLNSKGYTKSIDIWSVGCILA-EMLSNRPIF  213 (345)
T ss_dssp             TTTBCSCSTHHHHHHHHHHHH-HHHHSSCSC
T ss_pred             hhcCCCCCchhhhhccCceeh-HHhhCCCCC
Confidence            7553  345589988644433 333444444

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=1.5e-30  Score=265.67  Aligned_cols=176  Identities=18%  Similarity=0.193  Sum_probs=148.2

Q ss_pred             CCCCCCceeeeeeccCceEEEEE-----------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCC
Q psy9184         258 YPSSALKNCKKIGEGVYGEVFKL-----------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTEN  326 (562)
Q Consensus       258 ~~~~~y~~~~~LG~GsfG~Vyka-----------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n  326 (562)
                      ++.++|++.++||+|+||.||+|           +.||||+++...       .......+.+|+.+++++.+       
T Consensus        20 ~~~~~~~l~~~iG~G~fg~Vy~a~~~~~~~~~~~~~vAvK~i~~~~-------~~~~~~~~~~E~~~~~~l~~-------   85 (311)
T d1t46a_          20 FPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSA-------HLTEREALMSELKVLSYLGN-------   85 (311)
T ss_dssp             CCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTC-------CHHHHHHHHHHHHHHHHHCC-------
T ss_pred             CCHHHeEEeeEEeecCCeEEEEEEEeccccCCCCeEEEEEEECccc-------CHHHHHHHHHHHHHHHhccC-------
Confidence            45578999999999999999999           479999998653       23445678999999999964       


Q ss_pred             CCCcccccccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc---------------
Q psy9184         327 STPCFTELLKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK---------------  391 (562)
Q Consensus       327 ~~p~fv~l~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~---------------  391 (562)
                                        |||||++++++.+             .+.+|+|||||++|++.+.+.               
T Consensus        86 ------------------HpnIv~~~g~~~~-------------~~~~~lvmE~~~~g~l~~~l~~~~~~~~~~~~~~~~  134 (311)
T d1t46a_          86 ------------------HMNIVNLLGACTI-------------GGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAI  134 (311)
T ss_dssp             ------------------CTTBCCEEEEECS-------------SSSCEEEEECCTTEEHHHHHHHTTTTC---------
T ss_pred             ------------------CCCEEEEEEEEee-------------CCEEEEEEEcCCCCCHHHHHHhcccccccccccccc
Confidence                              4999999999975             457899999999998766542               


Q ss_pred             ------cCCHHHHHHHHHHHHHHHHHHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEecccee
Q psy9184         392 ------YRSPNQTYAMILQVVFSLAVAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISR  465 (562)
Q Consensus       392 ------~l~e~~i~~I~~QIl~aL~yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr  465 (562)
                            .+++.++..++.||+.||+|||+ ++|+||||||+|||++..+                    .++|+|||+++
T Consensus       135 ~~~~~~~l~~~~~~~~~~qi~~gl~~LH~-~~ivHrDLKp~NIl~~~~~--------------------~~ki~DfG~~~  193 (311)
T d1t46a_         135 MEDDELALDLEDLLSFSYQVAKGMAFLAS-KNCIHRDLAARNILLTHGR--------------------ITKICDFGLAR  193 (311)
T ss_dssp             -----CCCCHHHHHHHHHHHHHHHHHHHH-TTCCCSCCSGGGEEEETTT--------------------EEEECCCGGGS
T ss_pred             ccccccCCCHHHHHHHHHHHHHHHHHHHh-CCeeecccccccccccccC--------------------cccccccchhe
Confidence                  37899999999999999999999 7999999999999999886                    79999999998


Q ss_pred             eecC-------CcEEEeecCCCccccCC-CCCcHHHHHHHhh
Q psy9184         466 CFVG-------EKICYYDLSQDEELFEG-EGDYQFDMYRMMR  499 (562)
Q Consensus       466 ~~~~-------~g~v~~~l~~~pelF~g-~~~~q~dIy~lm~  499 (562)
                      ....       ..+.++..|++||++.+ ..+...|||+..-
T Consensus       194 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DIwS~G~  235 (311)
T d1t46a_         194 DIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGI  235 (311)
T ss_dssp             CTTSCTTSEECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHH
T ss_pred             eccCCCcceEeeecccChHHcCHHHhcCCCCCCcccccchHH
Confidence            7653       34677888999997765 5677799988633

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=6e-31  Score=267.24  Aligned_cols=230  Identities=17%  Similarity=0.189  Sum_probs=165.1

Q ss_pred             CCCCCceeeeeeccCceEEEEE-------------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCC
Q psy9184         259 PSSALKNCKKIGEGVYGEVFKL-------------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTE  325 (562)
Q Consensus       259 ~~~~y~~~~~LG~GsfG~Vyka-------------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~  325 (562)
                      +.++|++.+.||+|+||.||+|             ..||||+++...       .......+.+|+.++.++.+      
T Consensus        11 ~~~~~~l~~~iG~G~fg~Vy~~~~~~~~~~~~~~~~~vAvK~~~~~~-------~~~~~~~~~~e~~~l~~~~~------   77 (299)
T d1fgka_          11 PRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDA-------TEKDLSDLISEMEMMKMIGK------   77 (299)
T ss_dssp             CGGGEEEEEECC-----CEEEEEEECC----CCCEEEEEEECCCTTC-------CHHHHHHHHHHHHHHHHHCC------
T ss_pred             cHHHeEEeeEEeecCCcEEEEEEEcCCCcccccCceEEEEEEECccc-------ChHHHHHHHHHHHHHHHhcC------
Confidence            5578999999999999999999             269999998653       23445778999999999954      


Q ss_pred             CCCCcccccccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc--------------
Q psy9184         326 NSTPCFTELLKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK--------------  391 (562)
Q Consensus       326 n~~p~fv~l~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~--------------  391 (562)
                                         |||||++++++.+             ++.+|+|||||.+|++.+.+.              
T Consensus        78 -------------------HpnIv~~~~~~~~-------------~~~~~~v~e~~~~g~l~~~i~~~~~~~~~~~~~~~  125 (299)
T d1fgka_          78 -------------------HKNIINLLGACTQ-------------DGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPS  125 (299)
T ss_dssp             -------------------CTTBCCEEEEECS-------------SSSCEEEECCCTTCBHHHHHHTTSCC---------
T ss_pred             -------------------CCeEEeccccccc-------------CCeEEEEEEccCCCcHHHHHHhhcCCccccccccc
Confidence                               4999999999975             558999999999998877662              


Q ss_pred             -----cCCHHHHHHHHHHHHHHHHHHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceee
Q psy9184         392 -----YRSPNQTYAMILQVVFSLAVAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRC  466 (562)
Q Consensus       392 -----~l~e~~i~~I~~QIl~aL~yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~  466 (562)
                           .+++.+++.++.||+.||+|||+ ++|+||||||+|||++.++                    .+||+|||+++.
T Consensus       126 ~~~~~~l~~~~~~~~~~qi~~al~ylH~-~~ivHrDiKp~NiLl~~~~--------------------~~kl~dfg~~~~  184 (299)
T d1fgka_         126 HNPEEQLSSKDLVSCAYQVARGMEYLAS-KKCIHRDLAARNVLVTEDN--------------------VMKIADFGLARD  184 (299)
T ss_dssp             ---CCCCCHHHHHHHHHHHHHHHHHHHH-TTCCCSCCSGGGEEECTTC--------------------CEEECSTTCCCC
T ss_pred             cCccccCCHHHHHHHHHHHHHHHHHhhh-CCEEeeeecccceeecCCC--------------------CeEeccchhhcc
Confidence                 37999999999999999999999 7999999999999999987                    799999999997


Q ss_pred             ecCC-------cEEEeecCCCccccCC-CCCcHHHHHHHhhcccCCCCC-CCCCCChhhhHHHHHHHHhhcccCCCCCCC
Q psy9184         467 FVGE-------KICYYDLSQDEELFEG-EGDYQFDMYRMMRKQCQNNWQ-NFTPKNNVFWIHYLVDKATCLKKGYQYLRA  537 (562)
Q Consensus       467 ~~~~-------g~v~~~l~~~pelF~g-~~~~q~dIy~lm~~~~~~~W~-~~~P~tn~~wl~yl~~~Ll~~~~~~~~~~~  537 (562)
                      ....       ...++..|++||.+.+ .++.+.|||+..-... ..+. +..|+.+.. ...+...+.. +..+..+..
T Consensus       185 ~~~~~~~~~~~~~~~~~~y~aPE~l~~~~y~~k~DiwS~Gvvl~-ell~~g~~p~~~~~-~~~~~~~i~~-~~~~~~p~~  261 (299)
T d1fgka_         185 IHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLW-EIFTLGGSPYPGVP-VEELFKLLKE-GHRMDKPSN  261 (299)
T ss_dssp             GGGCCTTCCCTTSCCGGGGSCHHHHHHCCCCHHHHHHHHHHHHH-HHHTTSCCSSTTCC-HHHHHHHHHT-TCCCCCCSS
T ss_pred             ccccccccccccCCCChhhhhhhHhcCCCCCchhhhHHhHHHHH-HhccCCCCCCCCCC-HHHHHHHHHc-CCCCCCCcc
Confidence            7542       2345667899997654 6677799988644433 2232 344443322 2223333333 333332221


Q ss_pred             chhHHHHHHHHHHHhcCCCcCcCC
Q psy9184         538 PRHQAFELLEELGQNALHFDSCYE  561 (562)
Q Consensus       538 ~~~~~~~~l~~l~~~~l~~~s~~~  561 (562)
                          .-..+.+|...+|+++...|
T Consensus       262 ----~~~~l~~li~~cl~~dP~~R  281 (299)
T d1fgka_         262 ----CTNELYMMMRDCWHAVPSQR  281 (299)
T ss_dssp             ----CCHHHHHHHHHHTCSSGGGS
T ss_pred             ----chHHHHHHHHHHccCCHhHC
Confidence                12356667777777776554

>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK5
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=7.2e-30  Score=256.19  Aligned_cols=175  Identities=19%  Similarity=0.280  Sum_probs=145.4

Q ss_pred             CCCceeeeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCccccc
Q psy9184         261 SALKNCKKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTEL  334 (562)
Q Consensus       261 ~~y~~~~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~l  334 (562)
                      ++|+++++||+|+||+||+|      +.||||+++...      ........+.+|+.+|+.++|               
T Consensus         2 ~ry~~i~~LG~G~fg~V~~~~~~~~~~~vAvK~i~~~~------~~~~~~~~~~~E~~il~~l~h---------------   60 (292)
T d1unla_           2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDD------DDEGVPSSALREICLLKELKH---------------   60 (292)
T ss_dssp             CSEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSC------SSTTHHHHHHHHHHHHTTCCC---------------
T ss_pred             CCCEeeeEEecCcCeEEEEEEECCCCcEEEEEEEehhh------CChHHHHHHHHHHHHHHhcCc---------------
Confidence            57999999999999999999      789999998653      123455788999999999998               


Q ss_pred             ccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCcccc---ccCCHHHHHHHHHHHHHHHHH
Q psy9184         335 LKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDI---KYRSPNQTYAMILQVVFSLAV  411 (562)
Q Consensus       335 ~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l---~~l~e~~i~~I~~QIl~aL~y  411 (562)
                                 |||++++++|.+             ....++|||++.|+.+...+   ..+++..++.++.|++.||+|
T Consensus        61 -----------~niv~~~~~~~~-------------~~~~~iv~~~~~~~~l~~~~~~~~~~~~~~~~~~~~q~~~aL~~  116 (292)
T d1unla_          61 -----------KNIVRLHDVLHS-------------DKKLTLVFEFCDQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGF  116 (292)
T ss_dssp             -----------TTBCCEEEEEEC-------------SSEEEEEEECCSEEHHHHHHHTTTCCCHHHHHHHHHHHHHHHHH
T ss_pred             -----------CCEEeecccccc-------------ccceeEEeeeccccccccccccccccchhHHHHHHHHHHHHHHH
Confidence                       999999999976             56899999999887554433   248899999999999999999


Q ss_pred             HHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecC-----CcEEEeecCCCccccCC
Q psy9184         412 AEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVG-----EKICYYDLSQDEELFEG  486 (562)
Q Consensus       412 LH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~-----~g~v~~~l~~~pelF~g  486 (562)
                      ||+ .||+||||||+|||++.++                    .+||+|||+|+....     .....+..+.+||++.+
T Consensus       117 lH~-~~IvHrDiKP~NIli~~~~--------------------~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~pe~~~~  175 (292)
T d1unla_         117 CHS-RNVLHRDLKPQNLLINRNG--------------------ELKLANFGLARAFGIPVRCYSAEVVTLWYRPPDVLFG  175 (292)
T ss_dssp             HHH-TTEECCCCSGGGEEECTTC--------------------CEEECCCTTCEECCSCCSCCCSCCSCGGGCCHHHHTT
T ss_pred             hhc-CCEeeecccCcccccccCC--------------------ceeeeecchhhcccCCCccceeeccccchhhhhHhcc
Confidence            999 7999999999999999886                    799999999998764     23334567788888776


Q ss_pred             C--CCcHHHHHHHhhcc
Q psy9184         487 E--GDYQFDMYRMMRKQ  501 (562)
Q Consensus       487 ~--~~~q~dIy~lm~~~  501 (562)
                      .  .+...|||++.-..
T Consensus       176 ~~~~~~~~DiwSlG~il  192 (292)
T d1unla_         176 AKLYSTSIDMWSAGCIF  192 (292)
T ss_dssp             CSCCCTHHHHHHHHHHH
T ss_pred             CCCCCchhhccccchHH
Confidence            4  46679999865444

>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Glycogen synthase kinase-3 beta (Gsk3b)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=3.1e-30  Score=267.37  Aligned_cols=184  Identities=16%  Similarity=0.132  Sum_probs=142.9

Q ss_pred             CCceeeeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCcccccc
Q psy9184         262 ALKNCKKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTELL  335 (562)
Q Consensus       262 ~y~~~~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~l~  335 (562)
                      +|..+++||+|+||+||+|      +.||||++.....            ...+|+.+|++++|                
T Consensus        21 ~Y~~~k~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~------------~~~~Ei~il~~l~h----------------   72 (350)
T d1q5ka_          21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKR------------FKNRELQIMRKLDH----------------   72 (350)
T ss_dssp             EEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSS------------SCCHHHHHHHHCCC----------------
T ss_pred             CcEeeeEEeeCcCeEEEEEEECCCCCEEEEEEECccch------------HHHHHHHHHHhcCC----------------
Confidence            5889999999999999999      7899999986531            12479999999998                


Q ss_pred             cccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCcccc-------ccCCHHHHHHHHHHHHHH
Q psy9184         336 KCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDI-------KYRSPNQTYAMILQVVFS  408 (562)
Q Consensus       336 ~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l-------~~l~e~~i~~I~~QIl~a  408 (562)
                                |||++++++|.....       ......+|||||||.+| ++..+       ..+++.+++.++.||+.|
T Consensus        73 ----------~niv~~~~~~~~~~~-------~~~~~~~~lv~Ey~~~~-~~~~l~~~~~~~~~l~~~~~~~i~~qil~a  134 (350)
T d1q5ka_          73 ----------CNIVRLRYFFYSSGE-------KKDEVYLNLVLDYVPET-VYRVARHYSRAKQTLPVIYVKLYMYQLFRS  134 (350)
T ss_dssp             ----------TTBCCEEEEEEEC---------CCSCCEEEEEEECCSEE-HHHHHHHHHHTTCCCCHHHHHHHHHHHHHH
T ss_pred             ----------CCCCcEEEEEEecCc-------cCCceEEEEEEeccCCc-cHHHHHhhhhccCCCCHHHHHHHHHHHHHH
Confidence                      999999998864210       11244689999999866 33222       138999999999999999


Q ss_pred             HHHHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecC----CcEEEeecCCCcccc
Q psy9184         409 LAVAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVG----EKICYYDLSQDEELF  484 (562)
Q Consensus       409 L~yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~----~g~v~~~l~~~pelF  484 (562)
                      |+|||+ +||+||||||+|||++.++.                   .+||+|||+|+....    ...+++..|.+||.+
T Consensus       135 L~yLH~-~~IiHrDiKp~NILl~~~~~-------------------~~kl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~  194 (350)
T d1q5ka_         135 LAYIHS-FGICHRDIKPQNLLLDPDTA-------------------VLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELI  194 (350)
T ss_dssp             HHHHHT-TTEECCCCCGGGEEECTTTC-------------------CEEECCCTTCEECCTTSCCCSCCSCTTSCCHHHH
T ss_pred             HHHHHh-cCCcccCCCcceEEEecCCC-------------------ceeEecccchhhccCCcccccccccccccChHHh
Confidence            999999 79999999999999987753                   699999999998654    344567888999976


Q ss_pred             CC--CCCcHHHHHHHhhcccCCCCCCCCCC
Q psy9184         485 EG--EGDYQFDMYRMMRKQCQNNWQNFTPK  512 (562)
Q Consensus       485 ~g--~~~~q~dIy~lm~~~~~~~W~~~~P~  512 (562)
                      .+  .++...|||++.-. ..+.+.+..|+
T Consensus       195 ~~~~~~~~~~DIwSlG~i-l~el~~g~~pf  223 (350)
T d1q5ka_         195 FGATDYTSSIDVWSAGCV-LAELLLGQPIF  223 (350)
T ss_dssp             TTCSSCCTHHHHHHHHHH-HHHHHHTSCSS
T ss_pred             hcccCCCcceeecccceE-EEehhhCCCCC
Confidence            54  35667999886444 33444455555

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=9.3e-31  Score=267.01  Aligned_cols=171  Identities=22%  Similarity=0.208  Sum_probs=138.7

Q ss_pred             CCCceeeeeeccCceEEEEE--------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCccc
Q psy9184         261 SALKNCKKIGEGVYGEVFKL--------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFT  332 (562)
Q Consensus       261 ~~y~~~~~LG~GsfG~Vyka--------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv  332 (562)
                      ++|++.++||+|+||+||+|        ..||||.+....       .....+.+.+|+.+|+++.+             
T Consensus        10 ~~~~~~~~iG~G~fg~Vy~~~~~~~~~~~~vaiK~~~~~~-------~~~~~~~~~~E~~~l~~l~~-------------   69 (309)
T d1fvra_          10 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYA-------SKDDHRDFAGELEVLCKLGH-------------   69 (309)
T ss_dssp             GGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC-------------CHHHHHHHHHTTCCC-------------
T ss_pred             HHcEEEEEEeeCCCcEEEEEEECCCCeEEEEEEEEECccc-------ChHHHHHHHHHHHHHHhccC-------------
Confidence            57899999999999999999        257888876432       23344678999999999953             


Q ss_pred             ccccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc-------------------cC
Q psy9184         333 ELLKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK-------------------YR  393 (562)
Q Consensus       333 ~l~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~-------------------~l  393 (562)
                                  |||||++++++.+             ++.+|+|||||+||++.+.+.                   .+
T Consensus        70 ------------HpnIv~~~~~~~~-------------~~~~~iV~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l  124 (309)
T d1fvra_          70 ------------HPNIINLLGACEH-------------RGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTL  124 (309)
T ss_dssp             ------------CTTBCCEEEEEEE-------------TTEEEEEECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSS
T ss_pred             ------------CCCEeeEEEEEec-------------CCeeEEEEEecCCCcHHHHHhhccccccchhhhccccccCCC
Confidence                        3999999999976             568999999999998877652                   38


Q ss_pred             CHHHHHHHHHHHHHHHHHHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecC----
Q psy9184         394 SPNQTYAMILQVVFSLAVAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVG----  469 (562)
Q Consensus       394 ~e~~i~~I~~QIl~aL~yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~----  469 (562)
                      ++.++..++.||+.||.|||+ .+|+||||||+|||++.++                    .+||+|||+|+....    
T Consensus       125 ~~~~~~~~~~qia~gl~~lH~-~~iiHrDlkp~NIL~~~~~--------------------~~kl~DfG~a~~~~~~~~~  183 (309)
T d1fvra_         125 SSQQLLHFAADVARGMDYLSQ-KQFIHRDLAARNILVGENY--------------------VAKIADFGLSRGQEVYVKK  183 (309)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHH-TTEECSCCSGGGEEECGGG--------------------CEEECCTTCEESSCEECCC
T ss_pred             CHHHHHHHHHHHHHHHHhhhc-CCccccccccceEEEcCCC--------------------ceEEccccccccccccccc
Confidence            899999999999999999999 7999999999999999886                    799999999986543    


Q ss_pred             CcEEEeecCCCccccCCC-CCcHHHHHHH
Q psy9184         470 EKICYYDLSQDEELFEGE-GDYQFDMYRM  497 (562)
Q Consensus       470 ~g~v~~~l~~~pelF~g~-~~~q~dIy~l  497 (562)
                      ..+.++..|++||.+.+. .+.++|||+.
T Consensus       184 ~~~~gt~~y~aPE~l~~~~~~~~sDvwSf  212 (309)
T d1fvra_         184 TMGRLPVRWMAIESLNYSVYTTNSDVWSY  212 (309)
T ss_dssp             ----CCTTTCCHHHHHHCEECHHHHHHHH
T ss_pred             cceecCCcccchHHhccCCCCccceeehh
Confidence            244567789999988663 4556899885

>d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-jun N-terminal kinase (jnk3s)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=1e-29  Score=264.01  Aligned_cols=191  Identities=18%  Similarity=0.209  Sum_probs=144.1

Q ss_pred             CCCceeeeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCccccc
Q psy9184         261 SALKNCKKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTEL  334 (562)
Q Consensus       261 ~~y~~~~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~l  334 (562)
                      .+|+++++||+|+||+||+|      +.||||+++...      ........+.+|+.+++.++|               
T Consensus        17 ~~Y~i~~~LG~G~fg~V~~~~d~~t~~~vAvK~i~~~~------~~~~~~~~~~~Ei~il~~l~h---------------   75 (355)
T d2b1pa1          17 KRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPF------QNQTHAKRAYRELVLMKCVNH---------------   75 (355)
T ss_dssp             TTEEEEEECSCC--CEEEEEEETTTTEEEEEEEEESTT------SSHHHHHHHHHHHHHHHHCCC---------------
T ss_pred             CCeEEEEEeecCcCeEEEEEEECCCCCEEEEEEEChhh------cCHHHHHHHHHHHHHHHhcCC---------------
Confidence            57999999999999999999      899999998753      234455678999999999988               


Q ss_pred             ccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccccCCHHHHHHHHHHHHHHHHHHHh
Q psy9184         335 LKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIKYRSPNQTYAMILQVVFSLAVAEV  414 (562)
Q Consensus       335 ~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~~l~e~~i~~I~~QIl~aL~yLH~  414 (562)
                                 |||++++++|....       .......+|+|||||.||.+......+++.+++.++.||+.||.|||+
T Consensus        76 -----------pnIv~~~~~f~~~~-------~~~~~~~~~iv~Ey~~~~l~~~~~~~~~~~~i~~~~~qil~gl~~LH~  137 (355)
T d2b1pa1          76 -----------KNIISLLNVFTPQK-------TLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHS  137 (355)
T ss_dssp             -----------TTBCCCSEEECSCC-------STTTCCEEEEEEECCSEEHHHHHTSCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred             -----------CCeeEEEEEEeccc-------ccccCceeEEEEeccchHHHHhhhcCCCHHHHHHHHHHHHHHHHHhhh
Confidence                       99999999987532       112356899999999866433333459999999999999999999999


Q ss_pred             hCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecC----CcEEEeecCCCccccCCC-CC
Q psy9184         415 ELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVG----EKICYYDLSQDEELFEGE-GD  489 (562)
Q Consensus       415 ~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~----~g~v~~~l~~~pelF~g~-~~  489 (562)
                       +||+||||||+|||++.++                    .++|+|||+++....    ...+++..|++||++.+. .+
T Consensus       138 -~giiHrDlKP~Nil~~~~~--------------------~~kl~df~~~~~~~~~~~~~~~~~t~~y~aPE~l~~~~~~  196 (355)
T d2b1pa1         138 -AGIIHRDLKPSNIVVKSDC--------------------TLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYK  196 (355)
T ss_dssp             -TTCCCSCCCGGGEEECTTC--------------------CEEECCCCC---------------CCTTCCHHHHTTCCCC
T ss_pred             -cccccccCCcccccccccc--------------------ceeeechhhhhccccccccccccccccccChhhhcCCCCC
Confidence             7999999999999999886                    699999999987664    344568899999998774 56


Q ss_pred             cHHHHHHHhhcccCCCCCCCCCC
Q psy9184         490 YQFDMYRMMRKQCQNNWQNFTPK  512 (562)
Q Consensus       490 ~q~dIy~lm~~~~~~~W~~~~P~  512 (562)
                      ...|||++.-... ....+..|+
T Consensus       197 ~~~DiwSlG~~l~-ell~g~~pF  218 (355)
T d2b1pa1         197 ENVDIWSVGCIMG-EMVRHKILF  218 (355)
T ss_dssp             TTHHHHHHHHHHH-HHHHSSCSS
T ss_pred             CCcccccccchHH-HHhhCCCCC
Confidence            6699988654443 233344444

>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Ribosomal protein S6 kinase alpha 5, Msk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=5.8e-31  Score=270.53  Aligned_cols=232  Identities=20%  Similarity=0.226  Sum_probs=170.7

Q ss_pred             CCCceeeeeeccCceEEEEE---------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCcc
Q psy9184         261 SALKNCKKIGEGVYGEVFKL---------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCF  331 (562)
Q Consensus       261 ~~y~~~~~LG~GsfG~Vyka---------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~f  331 (562)
                      ++|+++++||+|+||+||+|         +.||||+++....    .......+.+.+|+.++++++|            
T Consensus        24 ~~y~~~~~IG~G~fg~Vy~~~~~~~~~~g~~vAvK~i~~~~~----~~~~~~~~~~~~E~~il~~l~h------------   87 (322)
T d1vzoa_          24 ENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATI----VQKAKTTEHTRTERQVLEHIRQ------------   87 (322)
T ss_dssp             GGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEE----EEEESSGGGCCCHHHHHHHHHT------------
T ss_pred             hceEEEEEEecCCCeEEEEEEECccCCCCcEEEEEEEehHHh----ccchHHHHHHHHHHHHHHhccC------------
Confidence            56999999999999999999         5799999975421    0111223567899999999998            


Q ss_pred             cccccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc---cCCHHHHHHHHHHHHHH
Q psy9184         332 TELLKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK---YRSPNQTYAMILQVVFS  408 (562)
Q Consensus       332 v~l~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~---~l~e~~i~~I~~QIl~a  408 (562)
                                   ||||+++++++.+             ...+|++|||+.||++.+.+.   .+++..++.++.||+.|
T Consensus        88 -------------~pnIv~~~~~~~~-------------~~~~~~v~e~~~~~~L~~~i~~~~~~~e~~~~~~~~Qi~~a  141 (322)
T d1vzoa_          88 -------------SPFLVTLHYAFQT-------------ETKLHLILDYINGGELFTHLSQRERFTEHEVQIYVGEIVLA  141 (322)
T ss_dssp             -------------CTTBCCEEEEEEE-------------TTEEEEEECCCCSCBHHHHHHHHSCCCHHHHHHHHHHHHHH
T ss_pred             -------------CCeEEEeeeeecc-------------CCceeeeeecccccHHHHHHHhcccccHHHHHHHHHHHHHH
Confidence                         7999999999986             558999999999998877664   48899999999999999


Q ss_pred             HHHHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecC------CcEEEeecCCCcc
Q psy9184         409 LAVAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVG------EKICYYDLSQDEE  482 (562)
Q Consensus       409 L~yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~------~g~v~~~l~~~pe  482 (562)
                      |.|||+ .+|+||||||+|||++.++                    .+||+|||+|+....      ....++..|++||
T Consensus       142 l~~lH~-~~ivHrDiKp~Nill~~~~--------------------~vkL~DFG~a~~~~~~~~~~~~~~~g~~~~~~pe  200 (322)
T d1vzoa_         142 LEHLHK-LGIIYRDIKLENILLDSNG--------------------HVVLTDFGLSKEFVADETERAYDFCGTIEYMAPD  200 (322)
T ss_dssp             HHHHHH-TTCCCCCCCGGGEEECTTS--------------------CEEESCSSEEEECCGGGGGGGCGGGSCCTTCCHH
T ss_pred             HHHhhc-CCEEeccCCccceeecCCC--------------------CEEEeeccchhhhcccccccccccccccccchhH
Confidence            999999 7999999999999999887                    799999999987643      2344577888999


Q ss_pred             ccCCC---CCcHHHHHHHhhcccCCCCCCCCCCCh---hhhHHHHHHHHhhcccCCCCCCCchhHHHHHHHHHHHhcCCC
Q psy9184         483 LFEGE---GDYQFDMYRMMRKQCQNNWQNFTPKNN---VFWIHYLVDKATCLKKGYQYLRAPRHQAFELLEELGQNALHF  556 (562)
Q Consensus       483 lF~g~---~~~q~dIy~lm~~~~~~~W~~~~P~tn---~~wl~yl~~~Ll~~~~~~~~~~~~~~~~~~~l~~l~~~~l~~  556 (562)
                      .+.+.   .+..+|||++.-... ....+..|+..   ..-...+..........++..      .-..+.+|.+++|.+
T Consensus       201 ~~~~~~~~~~~ksDIWSlG~iLy-elltG~~PF~~~~~~~~~~~i~~~~~~~~~~~~~~------~s~~~~~li~~~l~~  273 (322)
T d1vzoa_         201 IVRGGDSGHDKAVDWWSLGVLMY-ELLTGASPFTVDGEKNSQAEISRRILKSEPPYPQE------MSALAKDLIQRLLMK  273 (322)
T ss_dssp             HHTTCC---CTHHHHHHHHHHHH-HHHHSSCTTSCTTSCCCHHHHHHHHHHCCCCCCTT------SCHHHHHHHHHHTCS
T ss_pred             HhhcCCcCCCchhhhHHHHHHHH-HHHhCCCCCCCCCHHHHHHHHHHhcccCCCCCccc------CCHHHHHHHHHHccc
Confidence            88763   344689988644433 22223233311   111233334444412222221      134677788999999


Q ss_pred             cCcCCC
Q psy9184         557 DSCYEM  562 (562)
Q Consensus       557 ~s~~~~  562 (562)
                      +.+.|+
T Consensus       274 dP~~R~  279 (322)
T d1vzoa_         274 DPKKRL  279 (322)
T ss_dssp             SGGGST
T ss_pred             CHHHcC
Confidence            887763

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=6.4e-30  Score=260.79  Aligned_cols=174  Identities=20%  Similarity=0.222  Sum_probs=145.1

Q ss_pred             CCCCCCceeeeeeccCceEEEEE-----------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCC
Q psy9184         258 YPSSALKNCKKIGEGVYGEVFKL-----------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTEN  326 (562)
Q Consensus       258 ~~~~~y~~~~~LG~GsfG~Vyka-----------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n  326 (562)
                      ++.++|++.+.||+|+||.||+|           ..||||+++...       .......+.+|+.++++++|       
T Consensus        17 i~~~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~VAvK~~~~~~-------~~~~~~~~~~E~~il~~l~h-------   82 (308)
T d1p4oa_          17 VAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAA-------SMRERIEFLNEASVMKEFNC-------   82 (308)
T ss_dssp             CCGGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTS-------CHHHHHHHHHHHHHGGGCCC-------
T ss_pred             ecHHHeEEeeEEeeCCCeEEEEEEECCcccCCCCcEEEEEEECccc-------ChHHHHHHHHHHHHHHHcCC-------
Confidence            34578999999999999999998           479999997543       23445678999999999998       


Q ss_pred             CCCcccccccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc-------------cC
Q psy9184         327 STPCFTELLKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK-------------YR  393 (562)
Q Consensus       327 ~~p~fv~l~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~-------------~l  393 (562)
                                         |||+++++.+..             ++..++|||||.+|++.+.+.             .+
T Consensus        83 -------------------~nIv~~~~~~~~-------------~~~~~lv~e~~~~g~l~~~~~~~~~~~~~~~~~~~~  130 (308)
T d1p4oa_          83 -------------------HHVVRLLGVVSQ-------------GQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPP  130 (308)
T ss_dssp             -------------------TTBCCEEEEECS-------------SSSCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCC
T ss_pred             -------------------CCEeeeeeEEec-------------CCceeEEEeecCCCCHHHHHHhcccccccccccCCC
Confidence                               999999998865             557899999999998866552             26


Q ss_pred             CHHHHHHHHHHHHHHHHHHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecC----
Q psy9184         394 SPNQTYAMILQVVFSLAVAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVG----  469 (562)
Q Consensus       394 ~e~~i~~I~~QIl~aL~yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~----  469 (562)
                      ++..+..++.||+.||.|||+ .+|+||||||+|||++.++                    .+||+|||+|+....    
T Consensus       131 ~~~~~~~i~~~ia~gl~~LH~-~~ivHrDlk~~NiLld~~~--------------------~~Kl~DFGla~~~~~~~~~  189 (308)
T d1p4oa_         131 SLSKMIQMAGEIADGMAYLNA-NKFVHRDLAARNCMVAEDF--------------------TVKIGDFGMTRDIYETDYY  189 (308)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHH-TTCBCSCCSGGGEEECTTC--------------------CEEECCTTCCCGGGGGGCE
T ss_pred             CHHHHHHHHHHHHHHHHHHhh-CCeeeceEcCCceeecCCc--------------------eEEEeecccceeccCCcce
Confidence            889999999999999999999 7999999999999999886                    799999999986654    


Q ss_pred             ---CcEEEeecCCCccccCCC-CCcHHHHHHHh
Q psy9184         470 ---EKICYYDLSQDEELFEGE-GDYQFDMYRMM  498 (562)
Q Consensus       470 ---~g~v~~~l~~~pelF~g~-~~~q~dIy~lm  498 (562)
                         ....++..|++||.+.+. ...+.|||+..
T Consensus       190 ~~~~~~~~t~~y~aPe~l~~~~~~~~~Dv~S~G  222 (308)
T d1p4oa_         190 RKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFG  222 (308)
T ss_dssp             EGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHH
T ss_pred             eeccceecccccCCHHHHccCCCCcccccccHH
Confidence               223568889999987764 55568998853

>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 9, CDK9
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=1.2e-29  Score=258.66  Aligned_cols=184  Identities=18%  Similarity=0.226  Sum_probs=140.4

Q ss_pred             CCCCceeeeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCcccc
Q psy9184         260 SSALKNCKKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTE  333 (562)
Q Consensus       260 ~~~y~~~~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~  333 (562)
                      -++|+++++||+|+||+||+|      +.||||++.....      .......+.+|+.+|+.++|              
T Consensus         9 ~~rY~i~~~LG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~------~~~~~~~~~~E~~il~~l~h--------------   68 (318)
T d3blha1           9 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENE------KEGFPITALREIKILQLLKH--------------   68 (318)
T ss_dssp             GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEC----C------TTSSCHHHHHHHHHHHHCCC--------------
T ss_pred             cCCEEEEEEEecCcCeEEEEEEECCCCCEEEEEEEehhhc------chHHHHHHHHHHHHHHHhcC--------------
Confidence            378999999999999999999      7899999876532      22334577899999999998              


Q ss_pred             cccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCcccc---ccCCHHHHHHHHHHHHHHHH
Q psy9184         334 LLKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDI---KYRSPNQTYAMILQVVFSLA  410 (562)
Q Consensus       334 l~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l---~~l~e~~i~~I~~QIl~aL~  410 (562)
                                  |||+++++++.....     +....++.+|+|||||.+|.+....   ..+++.+++.++.||+.||.
T Consensus        69 ------------~nii~~~~~~~~~~~-----~~~~~~~~~~iv~e~~~~~~~~~~~~~~~~~~~~~~~~i~~qil~~l~  131 (318)
T d3blha1          69 ------------ENVVNLIEICRTKAS-----PYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNGLY  131 (318)
T ss_dssp             ------------TTBCCEEEEEEC---------------CEEEEEECCCEEHHHHHTCTTCCCCHHHHHHHHHHHHHHHH
T ss_pred             ------------CCccceEeeeecccc-----cccccCceEEEEEeccCCCccchhhhcccccccHHHHHHHHHHHHHHH
Confidence                        888888887754221     1112345799999999876432222   24889999999999999999


Q ss_pred             HHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecC---------CcEEEeecCCCc
Q psy9184         411 VAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVG---------EKICYYDLSQDE  481 (562)
Q Consensus       411 yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~---------~g~v~~~l~~~p  481 (562)
                      |||+ +||+||||||+|||++.++                    .+||+|||+|+....         .+.+++..|++|
T Consensus       132 ~lH~-~~ivHrDlKp~NILl~~~~--------------------~~kl~dfg~~~~~~~~~~~~~~~~~~~~gT~~Y~aP  190 (318)
T d3blha1         132 YIHR-NKILHRDMKAANVLITRDG--------------------VLKLADFGLARAFSLAKNSQPNRYTNRVVTLWYRPP  190 (318)
T ss_dssp             HHHH-TTEECCCCCGGGEEECTTS--------------------CEEECCCTTCEECCC-----CCCCCSCCSCGGGCCH
T ss_pred             Hhcc-CCEEecCcCchheeecCCC--------------------cEEeeecceeeecccccccccccccceecCHHHhhH
Confidence            9999 7999999999999999887                    799999999987653         234568889999


Q ss_pred             cccCCC--CCcHHHHHHHhhcc
Q psy9184         482 ELFEGE--GDYQFDMYRMMRKQ  501 (562)
Q Consensus       482 elF~g~--~~~q~dIy~lm~~~  501 (562)
                      |++.+.  ++...|||++.-..
T Consensus       191 E~~~~~~~~~~k~DiwSlGvil  212 (318)
T d3blha1         191 ELLLGERDYGPPIDLWGAGCIM  212 (318)
T ss_dssp             HHHTTCSSCCTHHHHHHHHHHH
T ss_pred             HHHcCCCCCCcHHHcccCCcee
Confidence            988764  56679998864443

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=4.9e-30  Score=262.38  Aligned_cols=166  Identities=17%  Similarity=0.207  Sum_probs=137.2

Q ss_pred             eeeeeccCceEEEEE---------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCccccccc
Q psy9184         266 CKKIGEGVYGEVFKL---------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTELLK  336 (562)
Q Consensus       266 ~~~LG~GsfG~Vyka---------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~l~~  336 (562)
                      .++||+|+||+||+|         ..||||+++...       .....+++.+|+.+|++++|                 
T Consensus        32 ~~~iG~G~fg~Vyk~~~~~~~~~~~~vAvK~~~~~~-------~~~~~~~~~~E~~~l~~l~H-----------------   87 (311)
T d1r0pa_          32 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRIT-------DIGEVSQFLTEGIIMKDFSH-----------------   87 (311)
T ss_dssp             EEEEEEETTEEEEEEEECC----CEEEEEEEECCCC-------CHHHHHHHHHHHHHHHTCCC-----------------
T ss_pred             ceEEeecCCeEEEEEEEECCCCEEEEEEEEEECccc-------CHHHHHHHHHHHHHHHhCCC-----------------
Confidence            578999999999999         258999987532       34556789999999999998                 


Q ss_pred             ccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc----cCCHHHHHHHHHHHHHHHHHH
Q psy9184         337 CSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK----YRSPNQTYAMILQVVFSLAVA  412 (562)
Q Consensus       337 ~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~----~l~e~~i~~I~~QIl~aL~yL  412 (562)
                               |||+++++++..            .++.+|+|||||++|++.+.+.    .+++..+..++.|++.||.||
T Consensus        88 ---------pnIv~~~g~~~~------------~~~~~~lv~E~~~~g~l~~~~~~~~~~~~~~~~~~i~~qia~gL~~l  146 (311)
T d1r0pa_          88 ---------PNVLSLLGICLR------------SEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFL  146 (311)
T ss_dssp             ---------TTBCCCCEEEEE------------TTTEEEEEEECCTTCBHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHH
T ss_pred             ---------CCEeEEeEEEEe------------cCCceEEEEEEeecCchhhhhccccccchHHHHHHHHHHHHHhhhhh
Confidence                     999999988654            2457999999999997766553    267888999999999999999


Q ss_pred             HhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecC---------CcEEEeecCCCccc
Q psy9184         413 EVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVG---------EKICYYDLSQDEEL  483 (562)
Q Consensus       413 H~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~---------~g~v~~~l~~~pel  483 (562)
                      |+ .+|+||||||+|||++.++                    .+||+|||+++....         .+..++..|++||.
T Consensus       147 H~-~~iiHrDLK~~NILl~~~~--------------------~~kL~DFG~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~  205 (311)
T d1r0pa_         147 AS-KKFVHRDLAARNCMLDEKF--------------------TVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALES  205 (311)
T ss_dssp             HH-TTCCCSCCSGGGEEECTTC--------------------CEEECSSGGGCCTTTTTCCCTTCTTCSSCCGGGSCHHH
T ss_pred             cc-cCcccCCccHHhEeECCCC--------------------CEEEecccchhhccccccccceecccccccccccChHH
Confidence            99 7999999999999998876                    799999999987653         23445778999997


Q ss_pred             cCC-CCCcHHHHHHH
Q psy9184         484 FEG-EGDYQFDMYRM  497 (562)
Q Consensus       484 F~g-~~~~q~dIy~l  497 (562)
                      +.+ ..+.+.|||+.
T Consensus       206 ~~~~~~~~ksDI~Sf  220 (311)
T d1r0pa_         206 LQTQKFTTKSDVWSF  220 (311)
T ss_dssp             HHHCCCCHHHHHHHH
T ss_pred             HhcCCCCChhHhhhh
Confidence            664 56777999885

>d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=1.1e-29  Score=261.77  Aligned_cols=191  Identities=17%  Similarity=0.198  Sum_probs=146.3

Q ss_pred             CCCCceeeeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCcccc
Q psy9184         260 SSALKNCKKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTE  333 (562)
Q Consensus       260 ~~~y~~~~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~  333 (562)
                      .++|+++++||+|+||+||+|      +.||||++....      ......+.+.+|+.+|+.++|              
T Consensus        17 ~~rY~i~~~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~------~~~~~~~~~~~Ei~il~~l~h--------------   76 (348)
T d2gfsa1          17 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPF------QSIIHAKRTYRELRLLKHMKH--------------   76 (348)
T ss_dssp             ETTEEEEEECGGGTTSSEEEEEETTTTEEEEEEECSCTT------SSHHHHHHHHHHHHHHHHCCC--------------
T ss_pred             CCCeEEEEEEecCCCeEEEEEEECCCCCEEEEEEECchh------cChHHHHHHHHHHHHHHhcCC--------------
Confidence            368999999999999999999      899999998653      223445678999999999998              


Q ss_pred             cccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc--cCCHHHHHHHHHHHHHHHHH
Q psy9184         334 LLKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK--YRSPNQTYAMILQVVFSLAV  411 (562)
Q Consensus       334 l~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~--~l~e~~i~~I~~QIl~aL~y  411 (562)
                                  |||++++++|....        ...+...+++|+++.||++.+.+.  .+++.+++.++.||+.||+|
T Consensus        77 ------------~~iv~~~~~~~~~~--------~~~~~~~~~i~~~~~gg~L~~~~~~~~l~e~~~~~i~~qil~aL~~  136 (348)
T d2gfsa1          77 ------------ENVIGLLDVFTPAR--------SLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKY  136 (348)
T ss_dssp             ------------TTBCCCSEEECSCS--------STTTCCCCEEEEECCSEEHHHHHTTCCCCHHHHHHHHHHHHHHHHH
T ss_pred             ------------CCeeeEEEEEeecc--------ccccCceEEEEEeecCCchhhhcccccccHHHHHHHHHHHHHHHHH
Confidence                        99999998886522        122344566677778887655543  49999999999999999999


Q ss_pred             HHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecC--CcEEEeecCCCccccCCC--
Q psy9184         412 AEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVG--EKICYYDLSQDEELFEGE--  487 (562)
Q Consensus       412 LH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~--~g~v~~~l~~~pelF~g~--  487 (562)
                      ||+ +||+||||||+|||++.++                    .+|++|||+|.....  .+..++..|++||++.+.  
T Consensus       137 LH~-~giiHrDiKp~NILi~~~~--------------------~~kl~dfg~a~~~~~~~~~~~g~~~y~apE~~~~~~~  195 (348)
T d2gfsa1         137 IHS-ADIIHRDLKPSNLAVNEDC--------------------ELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMH  195 (348)
T ss_dssp             HHH-TTCCCCCCCGGGEEECTTC--------------------CEEECCC----CCTGGGSSSCHHHHTSCHHHHTTCSC
T ss_pred             HHh-CCCcccccCCccccccccc--------------------cccccccchhcccCcccccccccccccCchhhcCCcc
Confidence            999 7999999999999999887                    799999999987654  445567889999987764  


Q ss_pred             CCcHHHHHHHhhcccCCCCCCCCCC
Q psy9184         488 GDYQFDMYRMMRKQCQNNWQNFTPK  512 (562)
Q Consensus       488 ~~~q~dIy~lm~~~~~~~W~~~~P~  512 (562)
                      .+...|||++.-.. .....+..|+
T Consensus       196 ~~~~~DiwSlGv~l-~~ll~g~~pF  219 (348)
T d2gfsa1         196 YNQTVDIWSVGCIM-AELLTGRTLF  219 (348)
T ss_dssp             CCTTHHHHHHHHHH-HHHHHSSCSC
T ss_pred             CCcccchhhhhHHH-HHHHhCCCCC
Confidence            35569998864333 3334444454

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=1.4e-29  Score=253.06  Aligned_cols=171  Identities=19%  Similarity=0.233  Sum_probs=136.2

Q ss_pred             CCCCceeeeeeccCceEEEEE----eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCcccccc
Q psy9184         260 SSALKNCKKIGEGVYGEVFKL----NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTELL  335 (562)
Q Consensus       260 ~~~y~~~~~LG~GsfG~Vyka----~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~l~  335 (562)
                      .++|+++++||+|+||.||+|    ..||||+++.+.          ..+.+.+|+.++++++|                
T Consensus         6 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~vAvK~i~~~~----------~~~~~~~E~~~l~~l~H----------------   59 (262)
T d1byga_           6 MKELKLLQTIGKGEFGDVMLGDYRGNKVAVKCIKNDA----------TAQAFLAEASVMTQLRH----------------   59 (262)
T ss_dssp             GGGEEEEEEEEECSSCEEEEEEETTEEEEEEECCCCC------------HHHHHTHHHHTTCCC----------------
T ss_pred             HHHeEEeEEEecCCCeEEEEEEECCeEEEEEEECcHH----------HHHHHHHHHHHHHhCCC----------------
Confidence            356899999999999999999    889999997542          22568899999999998                


Q ss_pred             cccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc-----cCCHHHHHHHHHHHHHHHH
Q psy9184         336 KCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK-----YRSPNQTYAMILQVVFSLA  410 (562)
Q Consensus       336 ~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~-----~l~e~~i~~I~~QIl~aL~  410 (562)
                                |||+++++++.+            .++.+|+||||+++|++.+.+.     .+++..++.|+.||+.||.
T Consensus        60 ----------pnIv~~~g~~~~------------~~~~~~lv~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~al~  117 (262)
T d1byga_          60 ----------SNLVQLLGVIVE------------EKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAME  117 (262)
T ss_dssp             ----------TTBCCEEEEECC------------C--CCEEEECCCTTEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
T ss_pred             ----------CCEeeEEEEEEe------------cCCcEEEEEeccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHhhcc
Confidence                      999999998753            1346899999999998887763     2899999999999999999


Q ss_pred             HHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecCC--cEEEeecCCCccccCC-C
Q psy9184         411 VAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVGE--KICYYDLSQDEELFEG-E  487 (562)
Q Consensus       411 yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~~--g~v~~~l~~~pelF~g-~  487 (562)
                      |||+ .+|+||||||+|||++.++                    .+||+|||+++.....  ....+..|++||.+.+ .
T Consensus       118 ylH~-~~ivH~dlkp~Nil~~~~~--------------------~~kl~dfg~s~~~~~~~~~~~~~~~y~aPE~l~~~~  176 (262)
T d1byga_         118 YLEG-NNFVHRDLAARNVLVSEDN--------------------VAKVSDFGLTKEASSTQDTGKLPVKWTAPEALREKK  176 (262)
T ss_dssp             HHHH-TTCCCSCCSGGGEEECTTS--------------------CEEECCCCC------------CCTTTSCHHHHHHCC
T ss_pred             cccc-CceeccccchHhheecCCC--------------------CEeecccccceecCCCCccccccccCCChHHHhCCC
Confidence            9999 7999999999999999887                    7999999999976542  2344667899997754 5


Q ss_pred             CCcHHHHHHHhh
Q psy9184         488 GDYQFDMYRMMR  499 (562)
Q Consensus       488 ~~~q~dIy~lm~  499 (562)
                      .+..+|||+..-
T Consensus       177 ~t~~sDIwSfG~  188 (262)
T d1byga_         177 FSTKSDVWSFGI  188 (262)
T ss_dssp             CCHHHHHHHHHH
T ss_pred             CChHHHHHhHHH
Confidence            666799987533

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.95  E-value=3.6e-29  Score=253.09  Aligned_cols=174  Identities=17%  Similarity=0.166  Sum_probs=138.7

Q ss_pred             CCCceeeeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCccccc
Q psy9184         261 SALKNCKKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTEL  334 (562)
Q Consensus       261 ~~y~~~~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~l  334 (562)
                      ++|++.+.||+|+||+||+|      +.||||++.....       .   ..+..|+.+++.++|               
T Consensus         7 ~rY~l~~~iG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~-------~---~~~~~E~~i~~~l~~---------------   61 (299)
T d1ckia_           7 NRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK-------H---PQLHIESKIYKMMQG---------------   61 (299)
T ss_dssp             TTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEESCTT-------S---CCHHHHHHHHHHSTT---------------
T ss_pred             CEEEEeEEEeeCCCcEEEEEEECCCCCEEEEEEEchhcc-------C---HHHHHHHHHHHHccC---------------
Confidence            57999999999999999999      7999999886531       1   246789999999998               


Q ss_pred             ccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc----cCCHHHHHHHHHHHHHHHH
Q psy9184         335 LKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK----YRSPNQTYAMILQVVFSLA  410 (562)
Q Consensus       335 ~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~----~l~e~~i~~I~~QIl~aL~  410 (562)
                                |++|+.++..+.+             ++..++||||+.+ .+...+.    .+++..+..++.|++.||+
T Consensus        62 ----------~~~i~~~~~~~~~-------------~~~~~ivme~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~  117 (299)
T d1ckia_          62 ----------GVGIPTIRWCGAE-------------GDYNVMVMELLGP-SLEDLFNFCSRKFSLKTVLLLADQMISRIE  117 (299)
T ss_dssp             ----------STTCCCEEEEEEE-------------TTEEEEEEECCCC-BHHHHHHHTTTCCCHHHHHHHHHHHHHHHH
T ss_pred             ----------CCcccEEEEEEec-------------CCEEEEEEEEcCC-chhhhhhhccCCCcHHHHHHHHHHHHHHHH
Confidence                      4556665555543             5588999999954 4444332    4899999999999999999


Q ss_pred             HHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecC------------CcEEEeecC
Q psy9184         411 VAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVG------------EKICYYDLS  478 (562)
Q Consensus       411 yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~------------~g~v~~~l~  478 (562)
                      |||+ +||+||||||+|||+...+.                 +..++|+|||+|+....            ...+++..|
T Consensus       118 ~lH~-~~iiHrDiKp~NIl~~~~~~-----------------~~~vkl~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~y  179 (299)
T d1ckia_         118 YIHS-KNFIHRDVKPDNFLMGLGKK-----------------GNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARY  179 (299)
T ss_dssp             HHHH-TTEECSCCCGGGEEECCGGG-----------------TTCEEECCCSSCEECBCTTTCCBCCCCBCCSCCCCSSS
T ss_pred             HHHH-CCeeeccCCHhhccccccCC-----------------CceeeeeccCcceeccccccccceeccccCCcCCCccc
Confidence            9999 79999999999999876532                 12699999999998754            234578899


Q ss_pred             CCccccCCC-CCcHHHHHHHhhcc
Q psy9184         479 QDEELFEGE-GDYQFDMYRMMRKQ  501 (562)
Q Consensus       479 ~~pelF~g~-~~~q~dIy~lm~~~  501 (562)
                      ++||.+.+. .+...|||++.-..
T Consensus       180 ~aPE~~~~~~~~~~~DiwSlG~~l  203 (299)
T d1ckia_         180 ASINTHLGIEQSRRDDLESLGYVL  203 (299)
T ss_dssp             CCHHHHTTBCCCHHHHHHHHHHHH
T ss_pred             cCHHHHhCCCCCChhhEEecCHHH
Confidence            999999884 56779999875444

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.95  E-value=7.4e-29  Score=252.39  Aligned_cols=173  Identities=19%  Similarity=0.227  Sum_probs=136.0

Q ss_pred             CCCceeeeeeccCceEEEEE----eeEEEEEeecCCCCCCcchhHHHHHHHH--HHHHHHHhcCCccccCCCCCCccccc
Q psy9184         261 SALKNCKKIGEGVYGEVFKL----NNSVIKIMPIEGDQSVNGEEQKKFREIF--SEIMVTKETSDLQYRTENSTPCFTEL  334 (562)
Q Consensus       261 ~~y~~~~~LG~GsfG~Vyka----~~vAIKii~~~~~~~~~~~~~~~~~~il--~Ei~ilk~L~h~~~~~~n~~p~fv~l  334 (562)
                      .+|.+.++||+|+||.||+|    +.||||++....        .   ....  .|+..+..++|               
T Consensus         3 ~~~~l~~~iG~G~fg~Vy~~~~~g~~vAvK~~~~~~--------~---~~~~~e~ei~~~~~~~H---------------   56 (303)
T d1vjya_           3 RTIVLQESIGKGRFGEVWRGKWRGEEVAVKIFSSRE--------E---RSWFREAEIYQTVMLRH---------------   56 (303)
T ss_dssp             GGEEEEEEEECCSSSEEEEEEETTEEEEEEEECGGG--------H---HHHHHHHHHHTSTTCCC---------------
T ss_pred             cEEEEEEEEeeCCCeEEEEEEECCEEEEEEEECccc--------h---hHHHHHHHHHHHhhCCC---------------
Confidence            35788899999999999999    899999987432        1   2233  45555556676               


Q ss_pred             ccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc--cCCHHHHHHHHHHHHHHHHHH
Q psy9184         335 LKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK--YRSPNQTYAMILQVVFSLAVA  412 (562)
Q Consensus       335 ~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~--~l~e~~i~~I~~QIl~aL~yL  412 (562)
                                 |||+++++++.+..         .....+|+|||||++|++.+.+.  .+++.++..++.|++.||+|+
T Consensus        57 -----------pnIv~~~~~~~~~~---------~~~~~~~lv~Ey~~~g~L~~~l~~~~l~~~~~~~~~~~ia~gl~~l  116 (303)
T d1vjya_          57 -----------ENILGFIAADNKDN---------GTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIKLALSTASGLAHL  116 (303)
T ss_dssp             -----------TTBCCEEEEEEEEC---------SSSEEEEEEEECCTTCBHHHHHHHCCBCHHHHHHHHHHHHHHHHHH
T ss_pred             -----------CcCcceEEEEEeCC---------CcceEEEEEEecccCCCHHHHHhcCCCCHHHHHHHHHHHHHHHHHH
Confidence                       99999999887532         11237899999999998877775  488999999999999999999


Q ss_pred             Hh-------hCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecC---------CcEEEee
Q psy9184         413 EV-------ELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVG---------EKICYYD  476 (562)
Q Consensus       413 H~-------~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~---------~g~v~~~  476 (562)
                      |+       ..||+||||||+||||+.++                    .+||+|||+|+....         ...+++.
T Consensus       117 H~~~~~~~~~~~IvHrDlKp~NILl~~~~--------------------~~Kl~DFGl~~~~~~~~~~~~~~~~~~~gt~  176 (303)
T d1vjya_         117 HMEIVGTQGKPAIAHRDLKSKNILVKKNG--------------------TCCIADLGLAVRHDSATDTIDIAPNHRVGTK  176 (303)
T ss_dssp             HCCBCSTTCBCEEECSCCCGGGEEECTTS--------------------CEEECCCTTCEEEETTTTEECC----CCSCG
T ss_pred             HHhhhhhccCCCeeccccCccceEEcCCC--------------------CeEEEecCccccccCCCcceeccccceeccc
Confidence            96       14899999999999998886                    799999999998754         2244578


Q ss_pred             cCCCccccCCCC-------CcHHHHHHHhh
Q psy9184         477 LSQDEELFEGEG-------DYQFDMYRMMR  499 (562)
Q Consensus       477 l~~~pelF~g~~-------~~q~dIy~lm~  499 (562)
                      .|++||++.+..       +.+.|||+..-
T Consensus       177 ~y~aPE~~~~~~~~~~~~~~~k~Di~S~Gv  206 (303)
T d1vjya_         177 RYMAPEVLDDSINMKHFESFKRADIYAMGL  206 (303)
T ss_dssp             GGCCHHHHTTCSCTTCHHHHHHHHHHHHHH
T ss_pred             CcCChhhccccccccCCCcCcchhhhhhHH
Confidence            899999988742       33489988543

>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

Probab=99.95  E-value=3.2e-28  Score=246.28  Aligned_cols=191  Identities=15%  Similarity=0.166  Sum_probs=149.1

Q ss_pred             CCCceeeeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCCCCCccccc
Q psy9184         261 SALKNCKKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTENSTPCFTEL  334 (562)
Q Consensus       261 ~~y~~~~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~~p~fv~l  334 (562)
                      ++|++.++||+|+||+||+|      +.||||+++....       .   ..+.+|+.+++.|.|               
T Consensus         5 ~~Y~i~~~iG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~-------~---~~~~~e~~~~~~l~~---------------   59 (293)
T d1csna_           5 VHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRSD-------A---PQLRDEYRTYKLLAG---------------   59 (293)
T ss_dssp             TTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCTT-------S---CCHHHHHHHHHHTTT---------------
T ss_pred             CceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEccccC-------c---HHHHHHHHHHHHhcC---------------
Confidence            67999999999999999999      7899999876431       1   245689999999998               


Q ss_pred             ccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccc----cCCHHHHHHHHHHHHHHHH
Q psy9184         335 LKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIK----YRSPNQTYAMILQVVFSLA  410 (562)
Q Consensus       335 ~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~----~l~e~~i~~I~~QIl~aL~  410 (562)
                                |+|++.+++++..             +...|+||||| ||++.+.+.    .+++..+..++.|++.||+
T Consensus        60 ----------~~~i~~~~~~~~~-------------~~~~~~vme~~-~~~l~~~~~~~~~~~~~~~~~~i~~q~~~~l~  115 (293)
T d1csna_          60 ----------CTGIPNVYYFGQE-------------GLHNVLVIDLL-GPSLEDLLDLCGRKFSVKTVAMAAKQMLARVQ  115 (293)
T ss_dssp             ----------CTTCCCEEEEEEE-------------TTEEEEEEECC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHH
T ss_pred             ----------CCCCCEEEEEeec-------------CCccEEEEEec-CCCHHHHHHhhccchhhHHHHHHHHHHHHHHH
Confidence                      6888888888765             56899999999 465655442    4899999999999999999


Q ss_pred             HHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecC------------CcEEEeecC
Q psy9184         411 VAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVG------------EKICYYDLS  478 (562)
Q Consensus       411 yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~------------~g~v~~~l~  478 (562)
                      |||+ .||+||||||+|||++.....               ....+||+|||+|+....            ...++|..|
T Consensus       116 ~lH~-~giiHrDiKp~Nili~~~~~~---------------~~~~vkl~DFG~a~~~~~~~~~~~~~~~~~~~~~GT~~y  179 (293)
T d1csna_         116 SIHE-KSLVYRDIKPDNFLIGRPNSK---------------NANMIYVVDFGMVKFYRDPVTKQHIPYREKKNLSGTARY  179 (293)
T ss_dssp             HHHT-TTEECCCCCGGGEEECCSSST---------------TTTCEEECCCTTCEESBCTTTCCBCCCCCCCCCCSCTTT
T ss_pred             HHHH-CCceeccCCccceeecCcccc---------------cCCceEEcccceeEEcccCccccceeecccCceEEchhh
Confidence            9999 799999999999999864310               011799999999998653            234578999


Q ss_pred             CCccccCCC-CCcHHHHHHHhhccc-----CCCCCCCCCCChhh
Q psy9184         479 QDEELFEGE-GDYQFDMYRMMRKQC-----QNNWQNFTPKNNVF  516 (562)
Q Consensus       479 ~~pelF~g~-~~~q~dIy~lm~~~~-----~~~W~~~~P~tn~~  516 (562)
                      ++||.+.+. .+.+.|||++.-...     ...|.+..+.+...
T Consensus       180 ~aPE~~~~~~~~~~~DiwSlG~~l~elltg~~Pf~~~~~~~~~~  223 (293)
T d1csna_         180 MSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQ  223 (293)
T ss_dssp             CCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCCHHH
T ss_pred             cCHHHhcCCCCChHHHHHHhhHHHHHHHhCCCcCCCccchhHHH
Confidence            999999885 566799998654443     34555554444433

>d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Sky1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.93  E-value=1.8e-26  Score=238.08  Aligned_cols=200  Identities=14%  Similarity=0.149  Sum_probs=151.7

Q ss_pred             cccccCCCCCCceeeeeeccCceEEEEE------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCCccccCCC
Q psy9184         253 SFEDRYPSSALKNCKKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSDLQYRTEN  326 (562)
Q Consensus       253 ~f~~~~~~~~y~~~~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h~~~~~~n  326 (562)
                      ..++.|..++|+++++||+|+||+||+|      +.||||+++..         ....+.+.+|+.+++.++|       
T Consensus         5 ~~g~~~~~~rY~i~~~LG~G~fg~Vy~~~~~~~g~~vAvKvi~~~---------~~~~~~~~~Ei~~l~~l~~-------   68 (362)
T d1q8ya_           5 FKGEPYKDARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGD---------KVYTEAAEDEIKLLQRVND-------   68 (362)
T ss_dssp             CTTCEETTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSC---------HHHHHHHHHHHHHHHHHHH-------
T ss_pred             CCCCCccCCcEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEecc---------ccchHHHHHHHHHHHHhcc-------
Confidence            3444555578999999999999999999      89999999854         2233567899999999988       


Q ss_pred             CCCcccccccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCcccc------ccCCHHHHHH
Q psy9184         327 STPCFTELLKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDI------KYRSPNQTYA  400 (562)
Q Consensus       327 ~~p~fv~l~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l------~~l~e~~i~~  400 (562)
                        ++.+......      |+||+++++++....           ....+++|+++.++......      ..+++..++.
T Consensus        69 --~~~~~~~~~~------~~~iv~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~  129 (362)
T d1q8ya_          69 --ADNTKEDSMG------ANHILKLLDHFNHKG-----------PNGVHVVMVFEVLGENLLALIKKYEHRGIPLIYVKQ  129 (362)
T ss_dssp             --TCCSHHHHHH------HTTBCCCCEEEEEEE-----------TTEEEEEEEECCCCEEHHHHHHHTTTSCCCHHHHHH
T ss_pred             --hhhhhhhhcC------cCceEEEEEEeeecc-----------ccceeeeeeecccccccccccccccccCCcHHHHHH
Confidence              3333332222      489999998886532           45778888888766543332      1388999999


Q ss_pred             HHHHHHHHHHHHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeecC--CcEEEeecC
Q psy9184         401 MILQVVFSLAVAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFVG--EKICYYDLS  478 (562)
Q Consensus       401 I~~QIl~aL~yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~~--~g~v~~~l~  478 (562)
                      +++||+.||+|||+.+||+||||||+|||++.++...              .-..++|+|||.|+....  ...+++..|
T Consensus       130 i~~qil~al~~lh~~~~IvHrDlKp~NIll~~~~~~~--------------~~~~~kl~dfg~s~~~~~~~~~~~gt~~y  195 (362)
T d1q8ya_         130 ISKQLLLGLDYMHRRCGIIHTDIKPENVLMEIVDSPE--------------NLIQIKIADLGNACWYDEHYTNSIQTREY  195 (362)
T ss_dssp             HHHHHHHHHHHHHHTTCEECSCCSGGGEEEEEEETTT--------------TEEEEEECCCTTCEETTBCCCSCCSCGGG
T ss_pred             HHHHHHHHHHHHhhhcCcccccCChhHeeeeccCccc--------------ccceeeEeecccccccccccccccccccc
Confidence            9999999999999756899999999999998765211              012599999999987654  445668889


Q ss_pred             CCccccCC-CCCcHHHHHHHhhcc
Q psy9184         479 QDEELFEG-EGDYQFDMYRMMRKQ  501 (562)
Q Consensus       479 ~~pelF~g-~~~~q~dIy~lm~~~  501 (562)
                      ++||++.+ ..+..+|||++.-..
T Consensus       196 ~aPE~~~~~~~~~~~DiwSlG~il  219 (362)
T d1q8ya_         196 RSPEVLLGAPWGCGADIWSTACLI  219 (362)
T ss_dssp             CCHHHHHTCCCCTHHHHHHHHHHH
T ss_pred             cChhhccccCCCccccccchHHHH
Confidence            99998876 456779999875443

>d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: RIO1-like kinases
domain: Rio2 serine protein kinase C-terminal domain
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=99.86  E-value=9.4e-22  Score=185.66  Aligned_cols=137  Identities=18%  Similarity=0.115  Sum_probs=101.8

Q ss_pred             CceeeeeeccCceEEEEE-----eeEEEEEeecCCCCCCc----------chhHHHHHHHHHHHHHHHhcCCccccCCCC
Q psy9184         263 LKNCKKIGEGVYGEVFKL-----NNSVIKIMPIEGDQSVN----------GEEQKKFREIFSEIMVTKETSDLQYRTENS  327 (562)
Q Consensus       263 y~~~~~LG~GsfG~Vyka-----~~vAIKii~~~~~~~~~----------~~~~~~~~~il~Ei~ilk~L~h~~~~~~n~  327 (562)
                      +.+.++||+|+||+||+|     +.||||+++........          ...........+|...+..+.|        
T Consensus         2 ~~vg~~IG~G~~g~Vy~a~~~~g~~vAvKi~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~--------   73 (191)
T d1zara2           2 DAIGKLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQG--------   73 (191)
T ss_dssp             SEEEEEEEECSSEEEEEEEETTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTTT--------
T ss_pred             chhCCEeeeCcceEEEEEECCCCCEEEEEEEecccchhhhhhhhhhhccHHHHHHHHHHHHHHHHHHHHccC--------
Confidence            357899999999999999     89999998753221000          0111223445678888988887        


Q ss_pred             CCcccccccccccCCCCCCCceeehhhhhccccCCCCCCCCCCCCeEEEEEEecCCCCCccccccCCHHHHHHHHHHHHH
Q psy9184         328 TPCFTELLKCSCVRGRYPDRLVTLWEEFAKTKKSYNDHPSMFEEDQIFIILELKNGGNDSGDIKYRSPNQTYAMILQVVF  407 (562)
Q Consensus       328 ~p~fv~l~~~~iv~g~~~pnIv~l~~~f~~~~~s~~~~p~~~~~~~l~LVmE~~~gG~ll~~l~~l~e~~i~~I~~QIl~  407 (562)
                                        ++++..++..                 ..+++|||++++.    ...+++..+..++.||+.
T Consensus        74 ------------------~~v~~~~~~~-----------------~~~lvme~~~~~~----~~~l~~~~~~~i~~ql~~  114 (191)
T d1zara2          74 ------------------LAVPKVYAWE-----------------GNAVLMELIDAKE----LYRVRVENPDEVLDMILE  114 (191)
T ss_dssp             ------------------SSSCCEEEEE-----------------TTEEEEECCCCEE----GGGCCCSCHHHHHHHHHH
T ss_pred             ------------------CCcceEEEec-----------------CCEEEEEeecccc----ccchhhHHHHHHHHHHHH
Confidence                              6666655432                 2379999998653    233566777889999999


Q ss_pred             HHHHHHhhCCeEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceeeec
Q psy9184         408 SLAVAEVELEFEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRCFV  468 (562)
Q Consensus       408 aL~yLH~~~~IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~~~  468 (562)
                      ||.|||+ +||+||||||+|||++..                     .++|+|||+|+...
T Consensus       115 ~l~~lH~-~giiHrDiKP~NILv~~~---------------------~~~liDFG~a~~~~  153 (191)
T d1zara2         115 EVAKFYH-RGIVHGDLSQYNVLVSEE---------------------GIWIIDFPQSVEVG  153 (191)
T ss_dssp             HHHHHHH-TTEECSCCSTTSEEEETT---------------------EEEECCCTTCEETT
T ss_pred             HHHHHhh-CCEEEccCChhheeeeCC---------------------CEEEEECCCcccCC
Confidence            9999999 799999999999999865                     58999999997653

>d1j7la_ d.144.1.6 (A:) Type IIIa 3',5"-aminoglycoside phosphotransferase {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Type IIIa 3',5"-aminoglycoside phosphotransferase
species: Enterococcus faecalis [TaxId: 1351]

Probab=98.04  E-value=5.6e-06  Score=78.82  Aligned_cols=49  Identities=14%  Similarity=0.042  Sum_probs=32.0

Q ss_pred             CceeeeeeccCceEEEEE----eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCC
Q psy9184         263 LKNCKKIGEGVYGEVFKL----NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSD  319 (562)
Q Consensus       263 y~~~~~LG~GsfG~Vyka----~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h  319 (562)
                      |+..+..+-|+-+.||+.    ..++||+.....        ......+.+|..++..+..
T Consensus        16 ~~~~~~~~G~s~~~v~rv~~~~~~~vlk~~~~~~--------~~~~~~~~~E~~~l~~l~~   68 (263)
T d1j7la_          16 YRCVKDTEGMSPAKVYKLVGENENLYLKMTDSRY--------KGTTYDVEREKDMMLWLEG   68 (263)
T ss_dssp             SEEEECSCCCSSSEEEEEECSSCEEEEEEECGGG--------TTSTTCHHHHHHHHHHHTT
T ss_pred             eEEEEcCCCCCCCcEEEEEeCCCeEEEEEcCCCc--------ccchhhHHHHHHHHHHHhc
Confidence            555555545556789988    778899887542        1112346788888887754

>d2pula1 d.144.1.6 (A:5-396) Methylthioribose kinase MtnK {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Methylthioribose kinase MtnK
species: Bacillus subtilis [TaxId: 1423]

Probab=97.24  E-value=0.00021  Score=72.78  Aligned_cols=53  Identities=21%  Similarity=0.249  Sum_probs=32.7

Q ss_pred             eeeeeeccCceEEEEE------eeEEEEEeecCCCCCCcch-hHHHHHHHHHHHHHHHhcCC
Q psy9184         265 NCKKIGEGVYGEVFKL------NNSVIKIMPIEGDQSVNGE-EQKKFREIFSEIMVTKETSD  319 (562)
Q Consensus       265 ~~~~LG~GsfG~Vyka------~~vAIKii~~~~~~~~~~~-~~~~~~~il~Ei~ilk~L~h  319 (562)
                      .++.||.|....||++      +.++||.-......  .+. -.....+...|..+|+.+..
T Consensus        30 ~~~eig~G~~N~vfrV~~~~~~~svivKqa~p~~r~--~g~~~~~~~~R~~~E~~~L~~~~~   89 (392)
T d2pula1          30 TCQEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKV--VGESWPLTIDRARIESSALIRQGE   89 (392)
T ss_dssp             EEEECCSSSSEEEEEEEC----CEEEEEEECCGGGC----CCCCCCTTHHHHHHHHHHHHHT
T ss_pred             eEEEeCCCceEeEEEEEeCCCCeEEEEecCCchhcc--cCCCCCCCHHHHHHHHHHHHHhhh
Confidence            4678999999999998      57899975421100  000 01122345678888887754

>d1nd4a_ d.144.1.6 (A:) Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase) {Bacteria (Klebsiella pneumoniae) [TaxId: 573]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase)
species: Bacteria (Klebsiella pneumoniae) [TaxId: 573]

Probab=97.21  E-value=0.00089  Score=62.61  Aligned_cols=29  Identities=24%  Similarity=0.215  Sum_probs=25.0

Q ss_pred             eEeccCCCCCEEEccCCCCCcccccCCcccccccCCceEEEEeccceee
Q psy9184         418 FEHRDLHMSNILVLQTDQDESSFTLDDTHYAMKTAGVQVTIIDFTISRC  466 (562)
Q Consensus       418 IiHRDLKpeNILl~~~~~~~~~~~~~~~~~~~~~~g~~vKL~DFGLSr~  466 (562)
                      ++|+|++|.|||++.+.                    .+-|+||+.+..
T Consensus       177 liHgD~~~~Nvl~~~~~--------------------~~~iID~~~~~~  205 (255)
T d1nd4a_         177 VTHGDACLPNIMVENGR--------------------FSGFIDCGRLGV  205 (255)
T ss_dssp             EECSSCCGGGEEEETTE--------------------EEEECCCTTCEE
T ss_pred             EEeCCCCCcceEEeCCc--------------------eEEEEEchhccc
Confidence            79999999999998763                    467999998865

>d1zyla1 d.144.1.6 (A:4-328) RdoA {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: RdoA
species: Escherichia coli [TaxId: 562]

Probab=95.75  E-value=0.015  Score=56.81  Aligned_cols=36  Identities=17%  Similarity=0.212  Sum_probs=26.4

Q ss_pred             eEEEEE-----eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCC
Q psy9184         275 GEVFKL-----NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSD  319 (562)
Q Consensus       275 G~Vyka-----~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h  319 (562)
                      -.||++     ..|++|+.....         ...+++..|...+..|..
T Consensus        36 N~vy~v~~~dg~~~VlK~~rp~~---------~s~~~i~~E~~~l~~L~~   76 (325)
T d1zyla1          36 NRVYQFQDEDRRRFVVKFYRPER---------WTADQILEEHQFALQLVN   76 (325)
T ss_dssp             SEEEEECCTTCCCEEEEEECTTT---------SCHHHHHHHHHHHHHHHH
T ss_pred             ceeEEEEcCCCCEEEEEEeCCCC---------CCHHHHHHHHHHHHHHHh
Confidence            479998     679999986532         123567789999888875

>d1nw1a_ d.144.1.8 (A:) Choline kinase {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Choline kinase
domain: Choline kinase
species: Caenorhabditis elegans [TaxId: 6239]

Probab=94.88  E-value=0.024  Score=56.77  Aligned_cols=44  Identities=14%  Similarity=0.231  Sum_probs=29.0

Q ss_pred             eeeeeccCceEEEEE-------------eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCC
Q psy9184         266 CKKIGEGVYGEVFKL-------------NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSD  319 (562)
Q Consensus       266 ~~~LG~GsfG~Vyka-------------~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h  319 (562)
                      ++.|+.|---.+|++             +.|++++.- ..        . ......+|..+++.+..
T Consensus        47 v~~l~GGltN~~y~v~~~~~~~~~~~~~~~vllRi~g-~~--------~-~~idr~~E~~i~~~ls~  103 (395)
T d1nw1a_          47 ISRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYF-NP--------E-TESHLVAESVIFTLLSE  103 (395)
T ss_dssp             EEEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEEC-SC--------C-CHHHHHHHHHHHHHHHH
T ss_pred             EEEcCCccccceEEEEeCCCCccccCCCCcEEEEecC-Cc--------c-hhhHHHHHHHHHHHHHh
Confidence            478998999999998             235555543 21        1 11245689999988875

>d2ppqa1 d.144.1.6 (A:5-320) Homoserine kinase ThrB {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Homoserine kinase ThrB
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=94.63  E-value=0.055  Score=51.80  Aligned_cols=49  Identities=16%  Similarity=0.194  Sum_probs=30.5

Q ss_pred             CCCceeeeeeccCceEEEEE----eeEEEEEeecCCCCCCcchhHHHHHHHHHHHHHHHhcCC
Q psy9184         261 SALKNCKKIGEGVYGEVFKL----NNSVIKIMPIEGDQSVNGEEQKKFREIFSEIMVTKETSD  319 (562)
Q Consensus       261 ~~y~~~~~LG~GsfG~Vyka----~~vAIKii~~~~~~~~~~~~~~~~~~il~Ei~ilk~L~h  319 (562)
                      +.....+.|..|---+.|+.    ..+++|+.....          ....+..|+.++..|..
T Consensus        18 g~~~~~~~i~~G~~N~ny~v~t~~g~yVLri~~~~~----------~~~~l~~~~~~l~~L~~   70 (316)
T d2ppqa1          18 GSLTSYKGIAEGVENSNFLLHTTKDPLILTLYEKRV----------EKNDLPFFLGLMQHLAA   70 (316)
T ss_dssp             CCEEEEEEECC---EEEEEEEESSCCEEEEEECC-------------CCHHHHHHHHHHHHHH
T ss_pred             CCceEeecCCCCcccCeEEEEECCCcEEEEEcCCCC----------CHHHHHHHHHHHHhhhh
Confidence            44555667778877888888    789999986421          11345567778777766