Diaphorina citri psyllid: psy9211


Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220------
MMRRLRRVNVDHYHVGWYQSSDVANFISLPLIESQFHYQISIEEAVVLIYDTQKTSRGFLTLKAYRLTPQAIQMYKEGEFTPEALRAIKVGFENLLLEVPVKIRNSPLTNVLLSEVDGLVSPAEGNNFLDLGTAFQQQVVRQAQDKHRYQAKRMQENQARAAKDEPPLPEEDLNKIFRPIPVPPRLSPMLMAAQVSAYADHISQFSSQSLAKLYMMEAVKSHNLTS
cHHHHHHccccccEEEEEEECcccccccHHHHHHHHHHHHHcccEEEEEEEcccccccEEEEEEEEccHHHHHHHHcccccHHHHHHcccccccccEEEEEEEEccHHHHHHHHHccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccc
***R*RRVNVDHYHVGWYQSSDVANFISLPLIESQFHYQISIEEAVVLIYDTQKTSRGFLTLKAYRLTPQAIQMYKEGEFTPEALRAIKVGFENLLLEVPVKIRNSPLTNVLLSEVDGLVSPAEGNNFLDLGTAFQQQ*************************************IFRPIPVPPRLSPMLMAAQVSAYADHISQFSSQSLAKLYMMEAVKS*****
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MMRRLRRVNVDHYHVGWYQSSDVANFISLPLIESQFHYQISIEEAVVLIYDTQKTSRGFLTLKAYRLTPQAIQMYKEGEFTPEALRAIKVGFENLLLEVPVKIRNSPLTNVLLSEVDGLVSPAEGNNFLDLGTAFQQQVVRQAQDKHRYQAKRMQENQARAAKDEPPLPEEDLNKIFRPIPVPPRLSPMLMAAQVSAYADHISQFSSQSLAKLYMMEAVKSHNLTS

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
Eukaryotic translation initiation factor 3 subunit H Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome.confidentB5DJJ2
Eukaryotic translation initiation factor 3 subunit H Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome.confidentQ7PVR3
Eukaryotic translation initiation factor 3 subunit H Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome.confidentQ9U9Q4

Prediction of Gene Ontology Terms ?

GO Term ?Description ?Confidence Level ?Parent GO Terms ?
GO:0005829 [CC]cytosolprobableGO:0005737, GO:0044464, GO:0005623, GO:0005622, GO:0005575, GO:0044444, GO:0044424
GO:0005488 [MF]bindingprobableGO:0003674
GO:0005852 [CC]eukaryotic translation initiation factor 3 complexprobableGO:0043234, GO:0005737, GO:0032991, GO:0044464, GO:0005623, GO:0005622, GO:0005575, GO:0044444, GO:0044424
GO:0022008 [BP]neurogenesisprobableGO:0032502, GO:0048856, GO:0044707, GO:0007399, GO:0048869, GO:0030154, GO:0008150, GO:0032501, GO:0044763, GO:0048731, GO:0009987, GO:0007275, GO:0044699

Prediction of Enzyme Commission Number ?

No EC number assigned to the protein, probably not an enzyme!


Spatial Structural Prediction

Structural Models Based on Templates

Template: 2O95, chain A
Confidence level:confident
Coverage over the Query: 1-72,91-117
View the alignment between query and template
View the model in PyMOL
Template: 4B4T, chain V
Confidence level:confident
Coverage over the Query: 1-81,96-119,135-207
View the alignment between query and template
View the model in PyMOL